LOCUS       DANHPA010000001        68739 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.001, whole genome shotgun sequence.
ACCESSION   DANHPA010000001 DANHPA010000000
VERSION     DANHPA010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 68739)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 68739)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..68739
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.001"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(51..1400)
                     /gene="mtaB"
                     /locus_tag="PTC28_000001"
     CDS             complement(51..1400)
                     /gene="mtaB"
                     /locus_tag="PTC28_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HDK5715328.1"
                     /translation="MSTVAFHTLGCKVNHYETEAIWQLFKDAEYNRVDFEQNADVFVI
                     NTCTVTNTGDKKSRQIIRRAIRQNPDAVICVTGCYAQTSSAEIMEIPGVDIVVGTQDR
                     HKLLDYIDTYQDERQPINGVSNIMKNRTYEELDVPYFTDRTRASLKIQEGCNNFCTFC
                     IIPWARGLMRSRDPKKVIEQATQLVNSGYKEIVLTGIHTGGYGQDLKDYNLAQLLRDL
                     ETVDGLERIRISSIEASQLTDEVIEVLQQSQKVVRHLHIPLQSGSDSVLKRMRRKYSM
                     AHFSERIQKLHAALPGLAVTSDVIVGFPGETEAEFQETYDFIVNHHFSELHVFPYSPR
                     IGTPAARMDDQIDEEIKNERVHKLIELSNQLAKTYASKFENDVLEVIPEEKGSQDGLL
                     VGYADNYMKVEFVGDESLIGQICKVKVTQAGYPINQGTLLRVVEHATNASENEKVLN"
     gene            complement(1405..2157)
                     /locus_tag="PTC28_000002"
     CDS             complement(1405..2157)
                     /locus_tag="PTC28_000002"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HDK5715329.1"
                     /translation="MQRYFLNENAEQHQRFFITNNNDIHHIKSVMRQNVGDALIINFL
                     NAVTYRCKIIDIEAQRITIETVERIEVETELPLNITICSGLIKGDKYEWLLQKATELG
                     ATSFIITQMDRSVVKLNQQKAAKKVERWQKIVKEAAEQSYRQAVPQVKFVSNLHEIYD
                     MIGQYDCVLMAYEAAAKQNERALFKQQLRQFKHGSHVLLLFGPEGGFSENEIALFEDV
                     AQSVGLGPRILRAETAPLYALSAISYEIELMG"
     gene            complement(2159..3091)
                     /gene="prmA"
                     /locus_tag="PTC28_000003"
     CDS             complement(2159..3091)
                     /gene="prmA"
                     /locus_tag="PTC28_000003"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001831256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HDK5715330.1"
                     /translation="MNWIELSVTVNQAAESIATEILQEAGSNGVAIEDSSEISKIRED
                     RFGEIFELNPADYPEQHMIVKAYFNDLQYDETLKNNIFSKLQASPLIDPDVLMIEQKF
                     VQESDWENEWKNYFHPFQASERFFIVPSWESVERDDTQLYIELDPGMAFGTGDHPTTS
                     MCLKALEQIVKPEHRVIDVGTGSGILSVASYLLGAQSIKATDLDEMAVQVAKENFEKN
                     HCLDAIETATGNLLTEEKGQYDVVIANILAHIIEKMVQDAYDHLNPEGYFITSGIIEE
                     KRESVQTLMEETGFTIKEVKNDEGWICIIGQKVN"
     gene            complement(3095..4228)
                     /gene="dnaJ"
                     /locus_tag="PTC28_000004"
     CDS             complement(3095..4228)
                     /gene="dnaJ"
                     /locus_tag="PTC28_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HDK5715331.1"
                     /translation="MAKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGSDE
                     KFKEISEAYEVLSDENKRAQYDQFGHSGPQGGFGQGFGGQDFSGFGGGGFEDIFSQFF
                     GGAQRQRDPNAPRRGDDLQYTMTVTFDEAVFGTKKEISIRKEVTCHTCGGEGAKPGTK
                     KKTCSYCHGAGHVSVEQNTILGRVRTEKVCPECNGTGEEFEEPCPTCHGKGTELKNVK
                     LEVTVPEGVDNDQQIRLAGQGGPGENGGPAGDLFVIFRVQPSDKFTREGDDILYNHNI
                     SFAQAALGDEVKIPTLKGHVMLTVPEGTQTGKQFRLKGKGIKNVHGYGYGDLFVNIRV
                     QTPTGLNERQRELLKEFAEMSGETVNEQPSNFKDKARRFFKGE"
     gene            complement(4338..6170)
                     /gene="dnaK"
                     /locus_tag="PTC28_000005"
     CDS             complement(4338..6170)
                     /gene="dnaK"
                     /locus_tag="PTC28_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HDK5715332.1"
                     /translation="MSKVIGIDLGTTNSCVSVLEGDEPKVIQNPEGARTTPSVVAFKN
                     GETQVGEVAKRQAITNPNTIQSIKRYMGTDHKENIDGKSYTPQEISAMILQNLKSTAE
                     SYLGEKVEKAVITVPAYFNDAERQATKDAGKIAGLEVERIINEPTAAALAYGLDKTDK
                     DEKVLVFDLGGGTFDVSILELGDGVFEVLATAGDNKLGGDDFDQVIIDYLVQQFKSEN
                     GVDLSQDKMALQRLKDAAEKAKKDLSGVSSTQISLPFISAGEAGPLHLETTLSRAKFE
                     ELAYDLVQKTMGPTRQAMKDAGLSNADIDEVILVGGSTRIPAVQEAIKKEIGKEPNKG
                     VNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIEIMGGRMNTLIERNTTIPTSK
                     SQVYSTAADNQPAVDIHVLQGERPMASDNKTLGRFQLTDIPPAPRGVPQIEVTFDIDK
                     NGIVNVTAKDLGTNKEQNITIESSSALSDEEIDRMVKDAEQNAEADKKRREEVDLRND
                     ADQLVFQVDKTLKDLGDNVSEEDKKEAEAKKDELKTALEGSDIEDIKAKKEALEQVVQ
                     QLSMKVYEQAQQAAQQGGENTSQNDSTVEDAEFKEVNDDDNQQK"
     gene            complement(6234..6875)
                     /gene="grpE"
                     /locus_tag="PTC28_000006"
     CDS             complement(6234..6875)
                     /gene="grpE"
                     /locus_tag="PTC28_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HDK5715333.1"
                     /translation="MFKRNGGLKMSEEKDVRKDEEIKETESQETTETSELEVENEQVA
                     VNQDSENENDASNDEKQDLKDEEIASLKAEVDAKEEQYLRLYAEFENYKRRIQNEAQT
                     QKRYQAQKVLTDVLPALDNFERALKIEGDDESFNALKKGVEMVYESLLKALEDNGLEK
                     IKTEGEQFDPNFHQAVMQDENPDFESGQITEELQAGYQLKDRVLRASMVKVNQ"
     gene            complement(6890..7879)
                     /gene="hrcA"
                     /locus_tag="PTC28_000007"
     CDS             complement(6890..7879)
                     /gene="hrcA"
                     /locus_tag="PTC28_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcription repressor HrcA"
                     /protein_id="HDK5715334.1"
                     /translation="MITPRQLKILTAIVEDYVDLGQPIGSNTLIQRHNVDVSPATIRN
                     DMKTLEENSLITKTHFSSGRIPSEAGFRLYANHLLEQPYNFEMQGSLDIHQMLVNHHY
                     DLSSTLDTFAKVFSNQAHYTTLVIGPDHSKASILDVHLMKLNPHHLIVVMIDETGQVK
                     HLHVTSDQPYADHSIIKVSNYLSANVRQFFDGNDVQSIEVYRMLGFNAEEADLIVRIL
                     HMLHQYRNNQSTRVYLGGKHQLIEGLNESTVASIQPILKYIESDRIADVIHHMSDQLI
                     NVRIGTDIEQNLHGIAILSRSYQIDKDLTGHIAVIGPTAMHYHNVIQLLSRIS"
     gene            complement(7982..9103)
                     /locus_tag="PTC28_000008"
     CDS             complement(7982..9103)
                     /locus_tag="PTC28_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HDK5715335.1"
                     /translation="MVAKSAYIHIPFCVKICTYCDFNKYFIQNQPVDLYLACLVEEMK
                     QSKASQLETLFVGGGTPTALSESQLEYLLQAIQDQFDIKGEYTFEANPDELTEEKVAL
                     LKRYGVNRLSLGVQTFDDTLLQTLGRSHRKADIYQAIDNARRQGISSISLDLMYHLPG
                     QSMQQFQESLEEALRLDIDHLSSYGLILEPQTQFYNQYRKGKLKMPNEDVGAEMYQYL
                     MNRMKNSPLQQYEISNFAKKGHESIHNQVYWKNESYYGFGAGASGYIGGVRYTNVNPV
                     NHYIKKIQQHEFPRLTETTPTVKEQIEEEMFLGLRMNTGVDKIKFQKKYHQTIEAIYA
                     KEIISLEGQNLIDQTDTHIALTDKGRIVGNTVFEAFIQV"
     gene            complement(9171..10994)
                     /gene="lepA"
                     /locus_tag="PTC28_000009"
     CDS             complement(9171..10994)
                     /gene="lepA"
                     /locus_tag="PTC28_000009"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HDK5715336.1"
                     /translation="MDNQQRLNRRENIRNFSIIAHIDHGKSTLADRILENTKSVESRE
                     MQAQLLDSMDLERERGITIKLNAVRLKYDAKDGQTYTFHLIDTPGHVDFTYEVSRSLA
                     ACEGAILVVDAAQGIEAQTLANVYLALDNDLELIPVINKIDLPAAEPERVKQEVEDVI
                     GLDKDDAVLASAKANIGIEEILEKIVEMIPPPDGDPAAPLKALIFDSEYDPYRGVISS
                     IRVVDGVVKAGDRIQMMATGKTFEVTEVGINTPKELPVEELTVGDVGYIIASIKNVDD
                     SRVGDTITHANRPAETPLKGYKKMNPMVYCGLFPIDNKDYNDLREALEKLQLNDASLE
                     FEPESSKALGFGYRTGFLGMLHMEIIQERIEREFGIELIATAPSVIYTVILRNGDEIH
                     VDNPAQMPDRDQIDKVFEPYVRATMMVPNDYVGAVMELCQRKRGQFVNMDYLDDIRVS
                     IVYELPLSEVVFDFFDQLKSNTKGYASFDYEFIENKESNLVKMDILLNGDKVDALSFI
                     VHRDFAYERGKTLVEKLKTLIPRQQFEVPVQAAVGHKIVARTNIKSMGKNVLSKCYGG
                     DISRKRKLLEKQKAGKAKMKAVGSVEIPQDAFLAVLKMDDE"
     gene            11317..11565
                     /locus_tag="PTC28_000010"
     CDS             11317..11565
                     /locus_tag="PTC28_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HDK5715337.1"
                     /translation="MPNIKSAIKRVRTTHTAESKNISQKNDMRSAVKSAKKAIETNAD
                     NKQELVSKAVKRIDKAAQKNLIHSNKADRMKSKLMSAK"
     gene            complement(11739..12713)
                     /gene="holA"
                     /locus_tag="PTC28_000011"
     CDS             complement(11739..12713)
                     /gene="holA"
                     /locus_tag="PTC28_000011"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HDK5715338.1"
                     /translation="MSNIHVIHGEVPELIDRETEQLTQKYLGNEPKDDFNYVKYNLYE
                     TTLNTIIEEAMTLPFFSDKKIIVVQNSYIFTGEKPPKEAQTNADSLLEFIEKYDEASL
                     IIFQVQAVKLDERKKVVKALRKVANIKKIEQMTEQEMQKWIHQYLNQSYKEIKQDALE
                     ALIQLTGIHYRMIKQELDKLLLFVGDRPTINKEDVQTIVNRSLEQNVFLLTDYIQKGQ
                     KAQAISLVKDLIQLKEEPIKLLALITSNYRLYYQSKILNQKGYSGQQIAKTVGVHPYR
                     VKLALNQARKYDLDTLLTIMDVCTETDYQLKSSYMDKVLILELFIMKL"
     gene            complement(12781..15009)
                     /locus_tag="PTC28_000012"
     CDS             complement(12781..15009)
                     /locus_tag="PTC28_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HDK5715339.1"
                     /translation="MTYWLITYIIGNIAYHHLLTACFIYSVLACSLYLKKKSWLFIIS
                     TLIIVLIGYTIETIQHKNEPSTLTPTPTSSHKTISVHLTTLPIVTDQLLTVQATFNKQ
                     EILIKGRIKPQQFIPDAHFLLNHQCQLTGSFQPPLYRQQRPLFAVKKITFDQCHMTTP
                     TLKQRITYVRSVVTERLLNSQLFGKGELIAIATGNANYLDKDMKSLAQQLGISHLFAV
                     SGTHVSIFIFMFYAIGKRLPLPMYYTEVGLILFLPVFLIFVGTSPSATRAVAMTLLLL
                     IVSRYFHMTSLQSLLLVYFVMSLMNSDYHYHLGFLYSFLISGILILMKDIFTERPIYQ
                     SLFLGSYIAVIAAIPLNYVQLNEIQWQGLISNLFFIPLYSIIIIPLSFILAIIAIVTP
                     AFLSMFTHFTHVIFDIQAFLLKRLTVLERFTLPIPDFGEFGFLCCTIATFILLYLLSQ
                     RRYIISIVLVCCLCILLWQVHPRFTNQMTMIDVGQGDAILFQSQTGETLMIDTGGAYE
                     HHQRKQSNINITKKNIYPLFKKLGIHQIDYLVITHAHQDHMGEIEHLSQYVNIKNVVI
                     NPSHFDDEKFQKVQHVIASEHAQLYSYEDLSRIVLGDFQFQFFNTDIPESEDPNEHSI
                     VTLATIHDIHVLLMGDATTKNEDVLLKQYSLPRIQILKVGHHGSRTSSSKTFLSQIHP
                     DIALISAGKQNMYHLPHPLTLQKLHDIHAKIYNTADNHHIHVRFDAFNEAGYTLRTEP
                     LN"
     gene            complement(15009..15470)
                     /locus_tag="PTC28_000013"
     CDS             complement(15009..15470)
                     /locus_tag="PTC28_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComE operon protein 2"
                     /protein_id="HDK5715340.1"
                     /translation="MKRIQWHEYFMAQSHLLALRSTCTRLSVGATITKDNRIIAGGYN
                     GSVSGEVHCIDEGCLMEGGHCIRTIHAEMNAILQCAKQGVSTENATIYVTHFPCLNCT
                     KSIIQAGIKTIYYAEDYHNHNYAVKLLEQSGVHYEKISFNRQHIAEYLLKS"
     gene            complement(15556..16224)
                     /locus_tag="PTC28_000014"
     CDS             complement(15556..16224)
                     /locus_tag="PTC28_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HDK5715341.1"
                     /translation="MFSVNQIIALVKQYKLQTAVVIAIFIAIGGWLVFNSGEEDPAKD
                     NLAMQQTQPIEVHQAKSKSKDKKEQNSQTPQKIIVDIKGAVKKPNTYEMQSDDRMKQL
                     LDKAEPLNTADLSRVNLAEKLTDQKMIYIPDQREVTTSNSSHASQQDDTSAASTSQNI
                     SVNLNTADEKELTQIPGIGPSKAQTIIKHREENGPFQSVEDLKNVKGIGEKTFEKLKN
                     YLTV"
     gene            complement(16278..17000)
                     /locus_tag="PTC28_000015"
     CDS             complement(16278..17000)
                     /locus_tag="PTC28_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDK5715342.1"
                     /translation="MQYENLSAFYDRLTDDQPYDLWLDLIQQTLQQQKVSRVLDIGCG
                     TGTLTQHFTQFADEVMGMDLSVEMLVLAKQKSSQVQWIEGDMSDFNLNTDFDLITILC
                     DSLNYLADETAVVATFEHVYQHLNVDGYFIFDVHTTHKMTHQFNGQVYLDDREDLTLV
                     WQTEPAEAPYSVWHDLTFFILNEAQTYVRQDESQYQRTFEKDQYIDMLKQVGFNHIET
                     FYDFNKALQAPESDRLFFIVKK"
     gene            complement(17000..17356)
                     /gene="rsfS"
                     /locus_tag="PTC28_000016"
     CDS             complement(17000..17356)
                     /gene="rsfS"
                     /locus_tag="PTC28_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HDK5715343.1"
                     /translation="MNAKDLLMLTVEAADAKKAEEIISLNMSGVSDLTDYFVVCHGNN
                     EKQVQAIARAVKESAESHQIEVKRMEGFNEARWILVDLTDVVVHVFHKDERSYYNLEK
                     LYQDVEMLGYKEVINS"
     gene            complement(17357..17941)
                     /gene="yqeK"
                     /locus_tag="PTC28_000017"
     CDS             complement(17357..17941)
                     /gene="yqeK"
                     /locus_tag="PTC28_000017"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
                     YqeK"
                     /protein_id="HDK5715344.1"
                     /translation="MDRTFAIELVEQKLPKKRFEHSLRVAETAVKLAEIYEGDKEKAE
                     LAGILHDFCKYDDLSFLYQQVTRYDLGHDLLSYGSEILHGPVCAAIMKHQYGIQDDEI
                     LLAIYNHTTGRKHMTKTEKLVFIADYIEPGRNTPKVEEIRDLVYNGGGLDKTIYEISK
                     RTVLYLVKKDVSVYQSTIDCLNYYNFNDSKIKDD"
     gene            complement(17919..18500)
                     /gene="nadD"
                     /locus_tag="PTC28_000018"
     CDS             complement(17919..18500)
                     /gene="nadD"
                     /locus_tag="PTC28_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HDK5715345.1"
                     /translation="MEKIVVYGGQFNPIHSGHEMVASEVNATIQPDHFYFMPSFMSPL
                     KKHDELIEVEHRIQMVKLVIENLGFGTLRLDEIERKGQSYTYDTLLNIRQESPDAKLF
                     FVIGTDQYEQLDRWYEIDALKSFVTFVVVNRGAVIQSDDDAIMMVNIPEMAISSTEIR
                     QRRSQQQTIHMWVPLNVEHYILKEGLYGSNICD"
     gene            complement(18503..18796)
                     /gene="yhbY"
                     /locus_tag="PTC28_000019"
     CDS             complement(18503..18796)
                     /gene="yhbY"
                     /locus_tag="PTC28_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HDK5715346.1"
                     /translation="MALTGKQKRFLRSKAHHVDPTFQIGKSGINENMVEQLKETLENR
                     ELIKIHILQNNMDDKSELAQNISQATDSELVQLIGSMIVLYKESRENKQIELP"
     gene            complement(18807..19619)
                     /gene="aroE"
                     /locus_tag="PTC28_000020"
     CDS             complement(18807..19619)
                     /gene="aroE"
                     /locus_tag="PTC28_000020"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HDK5715347.1"
                     /translation="MKFAVIGHPIDHSLSPLMHHANFKSLNLDYDYEALNIPPTHFEH
                     IRDIISEKELDGFNVTIPHKERIINYLDDMSDEARAIGAVNTVKVENGKWMGYNTDGT
                     GFVKGLQVKYGDLTGAHILILGAGGASKGIAYALSQVSDKRIAVANRTMARFNDWQLQ
                     IQPHSLEDVASIAHQFDIIINTTPLGMHQSQDSVMSFAQLKADVLVCDIIYIPFQTTF
                     LKEAAEKEFSTYNGLDMFIYQGAESFKIWTGLESDITTMRNAVLNKLNPTTT"
     gene            complement(19635..20735)
                     /gene="yqeH"
                     /locus_tag="PTC28_000021"
     CDS             complement(19635..20735)
                     /gene="yqeH"
                     /locus_tag="PTC28_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001280135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YqeH"
                     /protein_id="HDK5715348.1"
                     /translation="MTETLKCIGCGATLQSDDPQKPGYVPKASLEKEDVICRRCFRLK
                     NYNEVQDVGMESDDFLKLLNGLSDKPGIVVNLVDVFDFEGSFIHAVKRIVGNKKIILV
                     ANKIDLLPKQINKRRVSEWLRRLAKEYGLYPEDVCLISAYKGIGIDGLLQTIEKHRNG
                     QDVYIVGTTNVGKSTLINKLIEQTVGEKNVVTTSRIPGTTLDMIDIPIDDKHYMYDTP
                     GIIQEHQMTHYVSTKALNTIMPKKEIKQRVYQLNEAQSLFIGGLARVDYLKGGKRPLV
                     CYFSNELNIHRTKLEKADELWRKQIGTLLSPPSPKDRFDFEQLKTVRLTTENEKKDIM
                     ISGLGFVTVDAGAELQVIVPQNVEVTLRPSIM"
     gene            complement(20736..21263)
                     /locus_tag="PTC28_000022"
     CDS             complement(20736..21263)
                     /locus_tag="PTC28_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqeG family HAD IIIA-type phosphatase"
                     /protein_id="HDK5715349.1"
                     /translation="MGIIKQLFLPNQYVNSIYEIDFDKLKQLNIKGIITDLDNTLVGW
                     DEAQPTPKVENWFKTIDEQGFKVTVVSNNNEQRVKSFCQNLKVDYIFKAQKPRGKALR
                     RATEQMGMQKDEVVVIGDQMLTDVFGGNRHGLYTIMVVPVKNSDGFITKFNRLVERRL
                     LKHFKRKGYIKWEES"
     gene            complement(21336..22022)
                     /locus_tag="PTC28_000023"
     CDS             complement(21336..22022)
                     /locus_tag="PTC28_000023"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011302980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HDK5715350.1"
                     /translation="MIGIIGAMEEEVAILKSQMDAVEEIKIAHAIFYRGTLNDKDIIL
                     TQSGIGKVNVTISTSLLIDRFQPQCIINTGSAGGLQPGLALGDVVISRQVAYHDADAR
                     AFGYDMGQIPGMPTYFEADTSLFEKVDNVLKSLNQNGREGLIVSGDSFIGTNEQRQAI
                     LEYFPNALAVEMEATAIAQTCYQFNVPFIVTRAISDLADGEAGMTFEAFLKVAAKSSS
                     QMVNELVKVL"
     gene            complement(22272..23510)
                     /locus_tag="PTC28_000024"
     CDS             complement(22272..23510)
                     /locus_tag="PTC28_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HDK5715351.1"
                     /translation="MKKQSNQIKKTGEFVFTKTHRRLLLGSVFLMATSAIGPAFLTQT
                     AVFTEQFLASFAFAILLSIIIDIGAQINIWRVLVVTGYRGQEIANEVVKGLGTFISLL
                     IALGGLAFNIGNIAGAGLGLNAIFGLDVRVGAAITAVIAILVFISKNGQKIMDVITMI
                     LGVLMIIIVAYVMIESNPPYVEAAQRMVLPENPSALVLPIITLVGGTVGGYITFAGAH
                     RILDAGIKGKDYLPFVNHSAISAILTTGVMRSLLFLAVLGVVVTGVALNPENPPASVF
                     EHAIGPIGKNIFGIVLFAAAMSSVIGSAYTSTTFIKTMHNKLRTYDNYVVVTFIVVST
                     LIFLFIGRPVKLLIVAGALNGLILPIILGTVLIASKNKRIVGDYQHPTWMLLFGIVAV
                     IVTIFTGFFSLQGLAALWSQ"
     gene            complement(23514..24272)
                     /gene="pxpA"
                     /locus_tag="PTC28_000025"
     CDS             complement(23514..24272)
                     /gene="pxpA"
                     /locus_tag="PTC28_000025"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HDK5715352.1"
                     /translation="MKVDLNCDLGESFGNYQIGNDREVLPLITSANVACGFHAGDENV
                     MAETVRRAKENGVRVGAHPGFPDLQGFGRRNMDMSLTEIYNMVVYQVGALKMFCDING
                     VVLNHVKPHGALYQMAVRDETIARTIASAVYDIDPNLYLVGLSKSLLIDAGKAQGLKV
                     ASEVFADRRYESDGQLVSRKKEGATIEESEEAIAQVVQMVTEGTVKAISGEVIEIEAD
                     TICVHGDGAHALEFVKEIRSRLSEVNVDIVTLGG"
     gene            complement(24262..25632)
                     /locus_tag="PTC28_000026"
     CDS             complement(24262..25632)
                     /locus_tag="PTC28_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HDK5715353.1"
                     /translation="MFRVLVANRGEIAVRIIRALRELKMESVAIYAVGDENSLHVKLA
                     DQAVCIGQANPLDSYLNIRKILAAAEITKANAIHPGYGFLSESPVFAEKVENEGLYFI
                     GPTKKTMQRMGDKITARQTVDKAGVPIIPGSKSSVESVDEIKALAEEIGYPLVIKAAS
                     GGGGKGIRIVKEESQLERAFKEAKSEGNKYFNDDRVYVEAFIPVAKHVEVQVLGDGQS
                     RYIHLGERDCSVQRKNQKLIEESPCSALTEEKREKICNDAVKVAKAAQYRSAGTIEFL
                     VTEDAYYFIEMNARIQVEHTVTEMRTDIDLVREQLRIMQEGTLSLTQDDVHFYGHVIE
                     ARINAEDPQKAFRPTPGTVQRLHLPQGFNVRVDSLLYSGYTVSSYYDSLVAKVIVKGE
                     NRAHAIEKLKVTLDELVIDGFTTTADFLYAVLSYPPYYEGDARDVDIKFLDRHRIFKE
                     GNEDES"
     gene            complement(25646..26092)
                     /locus_tag="PTC28_000027"
     CDS             complement(25646..26092)
                     /locus_tag="PTC28_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein subunit"
                     /protein_id="HDK5715354.1"
                     /translation="MDLKQIEQTLNLLKQYGAKHFKYRDDEMELELDLSSIQQTEAPV
                     DPPQSTQRSNQHVEQTQQTDESAEDNTKVIRSQMIGTFYLQDEKELTKPAVKVGDKVN
                     KGDIIGYIEAMKVMNEVTADESGEVQEVLVGHGENIEFNQVILTLK"
     gene            complement(26083..27108)
                     /locus_tag="PTC28_000028"
     CDS             complement(26083..27108)
                     /locus_tag="PTC28_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HDK5715355.1"
                     /translation="MAIKIIKPGLFTTVQDKGRSGHQFEGYSPAGVMDRPSYEILNTL
                     LETEGQPALEITMIGPTIKFLDQNLFAMTGAPFSATLNGQPVSHQTVIKVEKNDVLEI
                     GHVIHGMRGYIGFAKPLDIPLFEGSYATHTRTGIGGFKGRALKVNDIIPTQPSFLDYQ
                     LIGRSSDFSSFTKARQLPIGLMDGPQLESFTRRTIKELEQLEFTISENSDRMGYRLKG
                     PSIQPFTDADIISEPVALGSVQVPKDGHPIILLNDRQTVGGYTKIGTVIDSDIVDIVQ
                     KQPGDKVKFEWMTFNEANEILARKNRKLEEAKAQIRQRPQRLLHNIRPTQQKIKKVLK
                     GDSIPWI"
     gene            complement(27098..27832)
                     /gene="pxpB"
                     /locus_tag="PTC28_000029"
     CDS             complement(27098..27832)
                     /gene="pxpB"
                     /locus_tag="PTC28_000029"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HDK5715356.1"
                     /translation="MYFRQISEQSFIIYFKAEISESVYEHVNAVVEHIQKMNHPHIHE
                     IVPSYRAIMVYFDGIQTDFETLIQALQLDTLDMQQTRVNTVQKRIVNIPVLYGGKWGP
                     DIEIVADHNHLTVDEVIQYHTENHYLVYMIGFMPGFPFLGGLSPRLHTPRKEEPRIKI
                     DAGSVGIANNQTGLYPSDSPGGWQIIGRTPIDVFNPKREPKILYQPGDRIKFYSINEE
                     QFLHIQKYVRKNQLDYDEWVMIEDGH"
     gene            complement(28088..28564)
                     /gene="greA"
                     /locus_tag="PTC28_000030"
     CDS             complement(28088..28564)
                     /gene="greA"
                     /locus_tag="PTC28_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HDK5715357.1"
                     /translation="MENQKQYPMTQEGYEKLEKELEELKTVKRPEVVEKIKVARSFGD
                     LSENSEYDAAKDEQGFIEQDIQRIETMLRHALIIEDTGDNHVVQIGKTVTFVELPGND
                     EESYQIVGSAESDAFNGKISNESPMAQALIGKQVDDEVRVPLPNGGEMNVKIVDIH"
     gene            complement(28591..29214)
                     /gene="udk"
                     /locus_tag="PTC28_000031"
     CDS             complement(28591..29214)
                     /gene="udk"
                     /locus_tag="PTC28_000031"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HDK5715358.1"
                     /translation="MATTIIGIAGGSGSGKTSVTNKIMNNLEGHSVALIEQDYYYKDQ
                     SHLTFEQRLKTNYDHPFAFDNDLLIQNLKSLQSGQSVEVPTYDYTNHTRSDKTIAFQP
                     KDVIIVEGIFALENEELRNMMDVKIYVDTDADLRILRRLVRDTKERGRTMESVIDQYL
                     TVVRPMHNQFIEPTKKFADIIIPEGGSNKVAIDIMTTKIQALVRKKD"
     gene            complement(29218..30483)
                     /locus_tag="PTC28_000032"
     CDS             complement(29218..30483)
                     /locus_tag="PTC28_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HDK5715359.1"
                     /translation="MKVLEEVKPATQAKMKKPELLAPAGNLEKLKIAVHYGADAVFIG
                     GQEYGLRSNADNFTMDEIREGVEFANRYGAKIYVTTNIIAHDENMEGLDDYLEQLEAT
                     GATGIIVADPLIIETCKRVAPKLEIHLSTQQSLSNYKAVEYWKEEGLDRVVLARETGA
                     MEMQEIKDKVDIEIEAFIHGAMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYDLLT
                     VDNDGELDVYYEDGNAVPFAMSPRDLKLIESIPNMMDLGIDSLKIEGRMKSIHYIATV
                     VSVYRKVIDAYAADPENFKIKPEWLFELDKCANRDTAPAFFKGTPGYEEQMFGNESSK
                     KAPFDFIGLVLDYDKDSQMATIQQRNHFKPGQEVEFFGPEIQTFKQVVDKIYDEEGNE
                     LDAARHPLQIVQIKVDQPIYPNNMMRKEV"
     gene            complement(30502..31431)
                     /locus_tag="PTC28_000033"
     CDS             complement(30502..31431)
                     /locus_tag="PTC28_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HDK5715360.1"
                     /translation="MTELLVTPKSLSHIETLIEKGADAFVIGEEKFGLRLAGEFNREE
                     MKKAVEIIHHAGKKAYAAVNGIFHNYHIPALEDYIAFLHEIRVDRIIFGDPAVVMIVK
                     QQENPIPLNWNAETLVTNHFQCNYWGRRGAKRAVLARELSLEEILNIKENSDVEIEVQ
                     VHGMTCMFQSKRMLLGNYYTFQDRQMKIQRNEAATDSQLLLYDEERDNKYPVFEDYNG
                     THIMSPNDICLIEELEPLFEAGIDSLKIDGVLQTEEYINVATEQYREAIDLYEEDPDT
                     YEDEKFMLVDPIEAIQPEHRPFDEGFYYKQTVY"
     gene            complement(31424..32068)
                     /locus_tag="PTC28_000034"
     CDS             complement(31424..32068)
                     /locus_tag="PTC28_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HDK5715361.1"
                     /translation="MEDKNQSYLLSLKQYDNDIDQLRNYAETHQVPIVDQLSLDLIQQ
                     IIRLHQPKEILEVGSAIGYSAMQFASVDKSINVTTIERNEEMIQQAKTNIRQYGYADQ
                     IRLIEADATEAFELVNDRIYDMIFIDAAKAQSQRFFELYCPLLREKGVMITDNILYHG
                     FVADIDVVRSRNVKQMVKKVQRYNQWLSQQQGFTTNFIHMDDGLAISIKESKHD"
     gene            complement(32465..32785)
                     /locus_tag="PTC28_000035"
     CDS             complement(32465..32785)
                     /locus_tag="PTC28_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002507440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1292 domain-containing protein"
                     /protein_id="HDK5715362.1"
                     /translation="MTNENHNQEIEIKNDETLLTLFDEEGNEVLYRKMLEFYHPGFEK
                     EYVILAEEGAQADDDDLIELIPMINEPDESGEGGRFLPVETDEEWDMIEEVVNTKLDD
                     DHEH"
     gene            complement(32799..33227)
                     /gene="ruvX"
                     /locus_tag="PTC28_000036"
     CDS             complement(32799..33227)
                     /gene="ruvX"
                     /locus_tag="PTC28_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HDK5715363.1"
                     /translation="MLKHKIIGLDVGSRTVGIAISDLMGWTAQGLDTLQINEEENELG
                     IDALIDIIQKENVGTVVIGLPKNMNNSIGFRGEASLKYKDALAERMPNLEIIMWDERL
                     STMAAERSLLEADVSRAKRKKVIDKMAAVFILQGYLDGLN"
     gene            complement(33220..33492)
                     /locus_tag="PTC28_000037"
     CDS             complement(33220..33492)
                     /locus_tag="PTC28_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IreB family regulatory phosphoprotein"
                     /protein_id="HDK5715364.1"
                     /translation="MANFDKTMKFNYDELPKDNVETVLNNVYNTLEERGYNAVNQIVG
                     YLLSGDPAYIPRHNEARNQIRHIDRDDIMEELVSYYLQNHSKDEHA"
     gene            complement(33555..36185)
                     /gene="alaS"
                     /locus_tag="PTC28_000038"
     CDS             complement(33555..36185)
                     /gene="alaS"
                     /locus_tag="PTC28_000038"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HDK5715365.1"
                     /translation="MKKLKASDIRQMYIDFFVEKGHMVEPSAPLVPIDDDSLLWINSG
                     VATLKNYFDGREIPKKPRIVNAQKSIRTNDIENVGFTARHHTFFEMLGNFSIGDYFKR
                     EAIEFAWEFLTSERWMAMEPEKLYVTIHPEDTEAYDLWTNVVGLTEDRIIRIEGNFWD
                     IGEGPSGPNTEIFYDRGEAYGQDDSAEEMYPGGENERYLEVWNLVFSEFNHNKDHTYT
                     PLPSKNIDTGMGLERMTSISQDVRTNYETDLFMPIIGQVEAISGKKYLVDKDNDVAFK
                     VIADHIRTIAFAISDGALPANEGRGYVLRRLLRRAVRFSQTLEINEPFMYQLVEIVAD
                     IMEPYYPNVKEKGDFIARVIKSEEERFHETLEEGLAILNDLIKQAKSSNETIAGEDAF
                     KLYDTYGFPIELTEEITLNEGLAIDMDSFNDHMEAQRDRARKARQSSQSMQVQSEVLK
                     EINTVSKFLGYEAFETHAKITDIVRDGERVTMADAGETIHFILDQTPFYAVSGGQVAD
                     KGTVSNAQFEIQVTEVIKAPNGQHLHTGVVQFGEVREAAEVTATIDRQARTAIMKNHS
                     ATHLLHAALKKVLGEHVNQAGSLVDSDRLRFDFSHIAPMTAKEMKQVEQMVNEEIWNS
                     IPVEIQEMNIEDAKAKGAMALFGEKYGDIVRVVNMQPFSIELCGGTHVRNTSEIGLFK
                     ITSESGTGAGVRRIEAVTGQNAFLYLEHYLDQFNALKQQVKAKSDAQVIEKVEQLQYN
                     EKTLKQTIEDKNKALNELKMGNIKDQVETINDMSVLITEVEVDNAKAMRTMMDDFKSK
                     LQDNIIVLASDVGGKVSLIASVPKALTDRVKAGDIIKNMAPVVGGKGGGRPDMAQGGG
                     TEPGKITEALQFIKNYIKSL"
     gene            complement(36431..38830)
                     /locus_tag="PTC28_000039"
     CDS             complement(36431..38830)
                     /locus_tag="PTC28_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RecD-like DNA helicase"
                     /protein_id="HDK5715366.1"
                     /translation="MENPTLFDHTFIKGTVEMILFQNTDNHYTVLKVEIEETNGDFDD
                     MATVVGYFPNMVEDESYTFKGQIVQHARYGQQLKAETFQKEIPHTKDAVIAYLSSELF
                     KGIGKKTAESIVNKLGENAIHDILKDESVIEQVPKLSKAKQQQIVEQIYANQESEQVM
                     IRLNELGFGSKLAMDIYKFYKSDTLTVLDQNPYQLVYDIKGVGFNKADQLAQQLGIHP
                     EHPDRLKAGLLYLVEDTCIKQGHTYLPQEALINETIQLLSQGKDSSVDYDTMTQILAE
                     LVEEKRLVNQEEMVAIPSLYYSEIKSTQNLYKIFANREHLTTFDASDIQLHIGEIEEV
                     NEVHYAPSQKEALEYAIQHKVMLLTGGPGTGKTTVIKGIVQLYAEIHGISLDYDDYSD
                     EDDYPVVLAAPTGRASKRLHEATGLEAMTIHRLIGWNQDTKPQDKLDNEIHAKLIIID
                     EMSMVDTWLFHQFMDAVPIDAQVVLVGDEDQLPSVGPGQVFKDLIDANVLPRINLTEV
                     YRQQDGSSIIDLAHRMKLGEKVDITQRFHDRSFIPCQTDQIPQVVEKVVNNAVQKGYT
                     MADIQVLAPMYRGNAGIKKLNQILQGILNPLSDESQREIEFGDVLFRKGDKVLQLINR
                     PNDNVFNGDIGVIVGIFWAKENALNKDVVVVDYDGNEITYLRSDLTELTHAYCTSIHK
                     AQGSEFPIVIMPIVKQYFRMLQKPILYTGLTRAKQSLVFLGDADAFNIGLATAGQTRL
                     TQLQTFLMQYFTPEDTDDKTDTDTASAEFILTEATMFKIHPMINMGEVTPYDFLEIDK
                     V"
     gene            complement(38833..39507)
                     /locus_tag="PTC28_000040"
     CDS             complement(38833..39507)
                     /locus_tag="PTC28_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDK5715367.1"
                     /translation="MELEQIHQLIQQGQFERALQESFNNIEAHPDEVENYINSGVLLA
                     EAGEIEKAERFFQRALTIKPDNGVIYYNLANVYFNEGRFQEAVKLYQEALSHHVDHID
                     TYYMLGLSLIQLDAKKQALPYIMRAAELDAQFEDLEVQFQFALLMCELEMFDQAIPVL
                     NQILERDPQHADAQYNLTLALYMLNENIDAAIQGFERAVQMDSQHLLSQHALKTFRLI
                     KAEEEA"
     gene            complement(39523..40635)
                     /gene="mnmA"
                     /locus_tag="PTC28_000041"
     CDS             complement(39523..40635)
                     /gene="mnmA"
                     /locus_tag="PTC28_000041"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000066093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HDK5715368.1"
                     /translation="MTNQNTRVVVGMSGGVDSSVTAHLLKEQGYDVIGIFMKNWDDTD
                     EFGVCTATEDYNDVIAVCNQIGIPYYAVNFEKEYWDKVFTYFLDEYKKGRTPNPDVMC
                     NKEIKFKAFLDHALKLGADYVATGHYARVRHHEDGSVEMLRGVDNNKDQTYFLNQLTE
                     AQLSKVMFPIGDIDKQKVREIALEQDLATAKKKDSTGICFIGERNFKTFLSQYLPAQP
                     GEMRTLNGELKGQHGGLMYYTIGQRHGLGIGGDGDPWFVVGKNLEDNILYVEQGFHHD
                     ALYSDYLIASDVSFVNATDLTEPLKCTAKFRYRQKDVGVTVTAHGDDAVKVTFDEPVR
                     AITPGQAVVFYDGDVCLGGATIDDVYKKDGQLDYVV"
     gene            complement(40635..41780)
                     /locus_tag="PTC28_000042"
     CDS             complement(40635..41780)
                     /locus_tag="PTC28_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HDK5715369.1"
                     /translation="MGVYADYAATTPVKPEVAEKMMAVYQTHFGNPSSIHSQGRDARR
                     LLDESRRTVAQYLNAKPNEVIFTSGATESNNTVIKGIAYANEAKGKHLITTKIEHHSV
                     LHVFEYLEQQGFEVTYLDVDAGGIIDLEQLKQSIREDTTLVSIMFVNNEVGTVQHVYD
                     IQDVLADHDVYFHMDAVQAVGHLPIDVEDLAVDALSMTAHKFGGPKGIGVLYVKTGTR
                     ITYPQLGGEQETKRRAGTENVPQIVGLATALTLAEASRDDNNVHLTRLKEQLIVGLQQ
                     RSIPFEYNGSMIDTTNHIINLHFPFVDVETLLTLLDLAGVYVSSGSACTAGSTIPSHV
                     LLAMYGEQSSRVDHSIRISLNEQVTEADIREIVIEIQKIYLKFKEEQ"
     gene            41989..43005
                     /locus_tag="PTC28_000043"
     CDS             41989..43005
                     /locus_tag="PTC28_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDK5715370.1"
                     /translation="MMPKSMKYSALNLVPIREGNNEKEAISQMVALAQHLEQNQYERL
                     WIAEHHNAPNLVSSATALLIQHALHHTNEMRIGSGGIMLPNHAPLVVAEQFGTLNTLY
                     GDRVDLGLGRAPGTDMATASALRRDQHQGVYQFPDEVQQLLQYFGPDTIQGYVKAIPA
                     VDKNVPIYILGSSTDSAHLAARKGLPYVFAGHFAPQQMQEAIAIYKDLFEPSEYLQAP
                     YIIVCLNVIMADTDEEAQYLATTQSQIFASILRGRMNKMQPPTEDLSQLLSPREIAMA
                     EARLQHSLIGNKASVNQQLDAFLQKHGWIDEIMAISYIYDTDLQHRSYRYFKALIDER
                     NQKQ"
     gene            complement(43469..43654)
                     /locus_tag="PTC28_000044"
     CDS             complement(43469..43654)
                     /locus_tag="PTC28_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017724656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HDK5715371.1"
                     /translation="MANQENKFEQAKGNFKETVGNVTDNQSLENEGKQDKASGKAKEV
                     VENVKDKAQDMIDKFKK"
     gene            complement(43722..44552)
                     /locus_tag="PTC28_000045"
     CDS             complement(43722..44552)
                     /locus_tag="PTC28_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDK5715372.1"
                     /translation="MEQFTLKDGQFIDQLGFGTYKLNGTKGAHAMTDALNLGYRLLDT
                     AYNYENEGAVGRAIQQSHVQRDDIWVTSKLPGRYQSEAHVYETIQESLYRLGLDYLDL
                     YLIHWPNPKQGKFVEAWKAMIVAQKSGLVRHIGVCNFLPEHIEQLEKETGVLPAINQI
                     ELHPYFNQKEMIAYHEEKGILTQAWSPLGRDNGVMEEPALKQLSSKYDKTVAQVILRW
                     HIQNGVMPIPKATSSKRQLENFDIFDFHITDEDLQAIDQLTRADGRRKNQDPAVYEEF
                     "
     gene            complement(44593..45012)
                     /locus_tag="PTC28_000046"
     CDS             complement(44593..45012)
                     /locus_tag="PTC28_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002458938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HDK5715373.1"
                     /translation="MKISTKGRYGLTLMIALAKRHGTGCVSLKTIAEENGLSDLYLEQ
                     LVGPLRNAGLIRSVRGAKGGYELKMSATEITAGDIIRLLEGPLTIVERMESEPPGQQQ
                     LWLRMRNAVREVLDQTTLQSLADYQDKDALEGYMFYI"
     gene            45122..46393
                     /locus_tag="PTC28_000047"
     CDS             45122..46393
                     /locus_tag="PTC28_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HDK5715374.1"
                     /translation="MLTEPLASRMRPRNIDEVIGQQHLVGETGIIRRMVNAKRLSSMI
                     FYGPPGIGKTSIAQAIAGSTAFKFRQLNAVTNTKKDMQMIVDEAKMSGQVILLLDEIH
                     RLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELFPLDKDDIKVAL
                     NHALEDEERGLKQFDASIDDDAFEYFATQSQGDVRSALNALELAVLSANNQPPHITLQ
                     DAEDCLQRGAFLSDKDGDMHYDVMSAFQKSIRGSDVDAALHYLGRLIQAGDLPTIARR
                     LLVISYEDIGLASPGAGQRTLAAIESAERLGFPEARIPLSQAVIELCLSPKSNSAIRS
                     IDAALSDIRKGHIGQVPDYLKDGHYQGAKALGRAVGYQYPHNHPNGFVAQQYLPELLK
                     NRQYYTPKETSKSEQQFKQIYDNIRQQQNEL"
     gene            complement(46461..47228)
                     /locus_tag="PTC28_000048"
     CDS             complement(46461..47228)
                     /locus_tag="PTC28_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine dehydratase"
                     /protein_id="HDK5715375.1"
                     /translation="MKHQFSRNELAIGQEGLNKLKQTTVAVLGVGGVGSFAAEALART
                     NIGHIILIDKDDVDITNVNRQLHALTTTVGQSKVSLMEERIRLINPDCKVTPLHMFYT
                     EETYEQLFEDYDIDYVVDASDTIIYKVHLMEQCLARDIQIISSMGAANKTDPTQFEIA
                     DISKTHTDPIARIIRNKLKQKGIKKGVPVVFSGESPIVIREDVKAVVGDAQGKNRKAQ
                     MPPSSNAYVPSVVGLICASYVCNNILKDINVQRIKDK"
     gene            complement(47311..47503)
                     /gene="ssrS"
                     /locus_tag="PTC28_000049"
     ncRNA           complement(47311..47503)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="PTC28_000049"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(47574..49340)
                     /gene="aspS"
                     /locus_tag="PTC28_000050"
     CDS             complement(47574..49340)
                     /gene="aspS"
                     /locus_tag="PTC28_000050"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002510453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HDK5715376.1"
                     /translation="MAKRTTYCGSVTEELLEQEVTLKGWVHNRRDLGGLIFVDVRDRE
                     GYVQVVFNPAFSKEALEVAERIRSEYVVEITGTVTKRDDETINPKIKTGQVEVQAKSI
                     EIINQSETPPFSINEENLNVDENIRLKYRYLDLRREKLAQTFKMRHQITRSIRQFLDG
                     DGFYDVETPVLTKSTPEGARDYLVPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQI
                     VKCFRDEDLRADRQPEFTQIDIEMSFVEQEDVMQLGEAMVKNVLADVKGIEMTDAFPR
                     MTYTEAMSRYGTDKPDTRFGMELLDVSELGQIMDFKVFKGAVESGGQVKALVVENAAA
                     DYTRKDIDGLTEFVNIYGAKGLAWVKVVEDGLNGPIARFFEDAHVTKLQALTGAKAGD
                     LVLFVADSKDVVAQSLGALRNKLGKERGLIDPEQYNFLWVTDWPLLEYDEEARRYVAA
                     HHPFTSPKVEDIDLLETAPEQAQAQAYDLVLNGFELGGGSIRIHDGELQQRMFKALGF
                     SDEAAQEQFGFLLDAFKYGAPPHGGIALGLDRFVMILSGRTNLRDTIAFPKTASATDL
                     MTDAPSPVSERQLDELSLRIKH"
     gene            complement(49340..50611)
                     /locus_tag="PTC28_000051"
     CDS             complement(49340..50611)
                     /locus_tag="PTC28_000051"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HDK5715377.1"
                     /translation="MIHIPRGTQDILPEETTKWRYIENQLHKLMEVYNYQEIRTPIFE
                     STDLFARGVGDSTDVVQKEMYTFKDKGDRSITLRPEGTAAVVRSYIENKMQGLPNQPV
                     KLYYNGPMFRYERKQKGRYRQFNQFGVEAIGAENPSMDAEVLAMVMHIYQSFGLKKLK
                     LVINSVGDAESRVDYQNALREHFQPVIHNYCKDCQQRIKTNPMRILDCKVDRHQPEIQ
                     TAPSITDFLNDYSKDYFEAVKSHLDRLGVPYEVDPKLVRGLDYYTHTAFELMMDNEAY
                     DGAITTLCGGGRYNGLLELLDGPSETGIGFALSIERLLLALEEEGIEFPQMQHIDLFV
                     ATMGEKADDFAVTLLNRLRHAGISVDKDYLSRKLKGQMKQADRLNATYTIVIGDQELE
                     AGEVAVKHMATGESQTMKFEEIESYIHGGKE"
     gene            complement(50973..51848)
                     /locus_tag="PTC28_000052"
     CDS             complement(50973..51848)
                     /locus_tag="PTC28_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HDK5715378.1"
                     /translation="MKKVDQWLKQKRIHPQRFYGACFTIALVGILVVSYFVLRHSDDD
                     HINLIEDAEIRTGPNAAYPVLYQVHKGDEFLQIGKQGKWIEVRSANGKQKGWIAGWHT
                     NLDIPADVNPHANPLRDKTIVLDPGHGGSDQGASSRQGDKTLEKDITLKTGLELKSLL
                     EKKGAKVKMTRSTDEYVKLKDRNLKGDVFISIHNDALETPNANGATVYWFHDQQEGLA
                     QTLNASIQKKAMLSNRGTRQENYQVLRQTEMPAVLLELGYISNPTDTVMMKDKNHRQI
                     VEQAIVDGLESYFLS"
     gene            complement(51845..52297)
                     /locus_tag="PTC28_000053"
     CDS             complement(51845..52297)
                     /locus_tag="PTC28_000053"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HDK5715379.1"
                     /translation="MKIVVQRVQSASVKNHQIERTIQQGFCLLVGIGEGDTQADAKVL
                     AKKIANSRIFEDENEKLNLNIQQINGEILSISQFTLYADVRKGNRPGFTQAMAPDQAN
                     ELYEYFNDQLRAFQIPVETGEFGTDMLVSIQNDGPVTIIYESVDGKVV"
     gene            complement(52310..54499)
                     /locus_tag="PTC28_000054"
     CDS             complement(52310..54499)
                     /locus_tag="PTC28_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HDK5715380.1"
                     /translation="MNNEYPYSVDEVLHKAKQYLDKEQYEYVLKSYHIAYKAHEGQFR
                     KNGLPYIMHPIQVAGILTEMHLDGPTIVAGFLHDVIEDTPYTFDDVAEMFNVEIATIV
                     DGVTKLKKVKYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLRAMPREKQ
                     IRISKETLEIYAPLAHRLGINTIKWELEDIALRYIDNVQYFRIVNLMKKKRSEREAYI
                     ENAIENIRKEMDIMDIAGDINGRPKHIYSIYRKMMKQKKQFDQIFDLLAVRVIVHSIK
                     DCYAVLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVGPNGDPLEIQIRTFEMHE
                     IAEHGVAAHWAYKEGKQVDKDNENYNKKLNWLKDIAETDHTSSDAQEFIESMKFDLQS
                     DKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGDIV
                     EIRTSKHSYGPSRDWLKIVRSSSAKSKIKSFFKKQDRSSNIEKGKFMVEAELKEQGFR
                     PEELLTEKNIKIVNDKYNFANEDDLYASVGFGGVTALQIVNKLSERLRIEHKQKALNQ
                     AQEVTKAAPIKDSITTDSGVYVEGLDNVLIKLSKCCNPIPGDRIVGYITKGHGIKVHR
                     TDCPNIKNENERLIDVEWVKSKDASQKYQVDLEVTAYDRNGLLNEVLQAVNSTSSQLI
                     KVAGKSDVDRNAVINLSIMVKNVHEVYKVADKIKQLGDIYTVTRVWN"
     gene            complement(54856..55374)
                     /locus_tag="PTC28_000055"
     CDS             complement(54856..55374)
                     /locus_tag="PTC28_000055"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009559512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HDK5715381.1"
                     /translation="MDLKQYVSEVKDWPKAGVNFKDITTIMDNGEAYGYATDQIVKFA
                     KEKNVDIVVGPEARGFIIGCPVAYAMGIGFAPVRKEGKLPREVIRYEYDLEYGSNVLT
                     MHADAIKPGQRVLITDDLLATGGTIEAAINLVEKQGGIVAGIAFIIELTYLNGMEKIK
                     DYDVMCLIKYDE"
     gene            complement(55386..57671)
                     /gene="recJ"
                     /locus_tag="PTC28_000056"
     CDS             complement(55386..57671)
                     /gene="recJ"
                     /locus_tag="PTC28_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HDK5715382.1"
                     /translation="MIKSKFQWQTDTNRQSMDDVLVEQYKLTPLMRYILESKGYTEAT
                     QLAQVLSASKDNMHNPSLMSDMDKAVKRIHTAIQNQEKILVYGDYDADGVTSTTIMVK
                     TLQQLGAIVGWYIPNRFTEGYGPSEPAFKNAYDEGVSLIITVDNGIQGHTEIEMVQNL
                     GVDVIVTDHHEIGDTLPAAYAIVHPMHPDYDYPFISLCGAGVALKLAQSLLGDVPNIF
                     WVYAMIGTIADLVSLTDENRFIVQHGLQLLNESPPVSIAAILNQAQFNDTVTEETIGF
                     IIGPRLNAVGRLDDAALAAELLMTDDAEEALFLAEQVEHFNVERKDIVQTIVDEAMVM
                     AEDAIQAGEHFLVLAKEDWHEGVLGIVASRIVETFHLPTMVLNIDHEQQHAKGSSRSI
                     TQVSMFEALSSQQTLISKFGGHHMAAGLTLPIDQVSALREGLNDWMRTHIDTTALQPI
                     QKVDVTIDVGHITVEQIQSIERLRPFGTDFKRPIIQVNGLTVLQSKGIGQQQAHLKMT
                     FVEQNLQALFWNQGALSSELMPNQHVDVTGELQINEWNGNRTAQMVLTDMKSNERQIL
                     DYRSKNKRLPVFEDDQHVCYLIHPNQDKTSAHEYYYGENIPQQYDKCVMRDLPLTMED
                     IKLSCHYLNTSQVYLVFQHDRSIYFEGLPQPADFKNCYKALYQKGQTDLQKDGVALSQ
                     FINVKPMMLKFILKVFLDLGIISQKNGIIEIVHSTDKQPITSSRVYQARVQRIEVEKQ
                     LLYEEFGAIKSWIENELARNE"
     gene            complement(57788..60067)
                     /gene="secDF"
                     /locus_tag="PTC28_000057"
     CDS             complement(57788..60067)
                     /gene="secDF"
                     /locus_tag="PTC28_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecDF"
                     /protein_id="HDK5715383.1"
                     /translation="MKKVSRLITFILLVVLLFAGMSATYKSVIKNVNLGLDLQGGFEV
                     LYQVNPLGDGEKIDNTAVQSTAKTLERRVNVLGVSEPKIQVEDQNRIRVQLAGVQDQN
                     QARKILSSQANLTIRDADDKVLLTGKDLVQGSAKQEFKQNTNQPAVTFKLKDSDKFKK
                     VTEEISKKQENVMVVWLDFEKGDSYEKEKTKEDPKFISAASVNQPINSTNVEISGGFQ
                     GEKGISEAKQIADLLNSGSLPVELKEIYSTSVGAQFGQDALDKTINASMIGIGIIFLF
                     MLLFYRLPGIVAVITLTTYIYLTMVAFNFISGVLTLPGLAALVLGVGMAVDANIIMYE
                     RIKDEIRIGRTLKQAYKKANKSSFITILDANLTTVLAAAVLFFFGESSVKGFATMLLL
                     AILMSFVTAVFLTRVLLSLVVHSNVFKKKLWWFGVKQSQIHDINKGYDVHELSTPYDK
                     VDFMKWAKPLFALSGVVIVAGVIILAIFKLNLGIDFTSGTRVDLQSNQKLTQAQVEKT
                     MESIDLKPNQLSIGGSNNENASMQFKRDLNKDEVAKVTDTLKSQYGKEPSVNTVSPVI
                     GQELAKNAMLAVIIASIGMIIYISLRFEWRMGIASIISLLHDAFMIIAVFSLFRLEVD
                     ITFIAAVLTIIGYSINDTIVTFDRVREMLSKIKVITKEDQIDYIVNSSIRQTLTRSIN
                     TVLTVVIVVIALLVLGASSIFNFSLALLIGLLSGVYSSIIIAVPLWGMLKKRELRKSP
                     HHKLVVYKRKRTNEEKVLV"
     gene            complement(60209..60472)
                     /gene="yajC"
                     /locus_tag="PTC28_000058"
     CDS             complement(60209..60472)
                     /gene="yajC"
                     /locus_tag="PTC28_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDK5715384.1"
                     /translation="MSSLISLLPLVLLFVVMWLFMIRPQQKRAKEHRQMVEQLQAGQR
                     VTTIGGIKGTVRAVDETSAVITVNGKGTELTFEKQAIKQVDPS"
     gene            complement(60489..61628)
                     /gene="tgt"
                     /locus_tag="PTC28_000059"
     CDS             complement(60489..61628)
                     /gene="tgt"
                     /locus_tag="PTC28_000059"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016425271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HDK5715385.1"
                     /translation="MPAVTYEHIKTCKQSGARLGIVHTPHGSFETPMFMPVGTKATVK
                     TMSPEELKQMNTKILLGNTYHLWLQPGNDIVKQAGGLHKFMNWDGPILTDSGGFQVFS
                     LSNLRKITEEGVEFRHHTNGSKLFLSPEDSIKIQNDLGSDIIMAFDECPPMPAEYDYV
                     KNSLERTTRWAERCLAAHQRPEDQALFGIIQGGEYKDLRQQSAEELVKLDFPGYAIGG
                     LSVGEPKPVMYEMVEHTEQFMPKDKPRYLMGVGSPDALIECSIRGMDMFDCVLPTRIA
                     RNGTCMTSTGRLVVKNAQFKDDFRPLDENCDCYTCQNYTRAYLRHLIKADETFGIRLT
                     TYHNLHFLLKLMENIRQAIREDRLLDFKEEFFEQYGLNVDNPKNF"
     gene            complement(61646..62671)
                     /gene="queA"
                     /locus_tag="PTC28_000060"
     CDS             complement(61646..62671)
                     /gene="queA"
                     /locus_tag="PTC28_000060"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HDK5715386.1"
                     /translation="MNIEEFDYVLPESLIAQTPLKQRDQSRLLYLNRDTGETEDLHFK
                     DITRFFQPGDTLVLNDTRVMPARLFGIKEETNAKVEMLMLTQIEGDDWEVLLKPAKRI
                     KLGQTLSFGEGKIKATCIKELDQGGRIMRLSYEGILQERLDELGEMPLPPYIKERLDE
                     KERYQTVYAKAAGSAAAPTAGLHFTDALLDDIRRQGVQIAFITLHVGLGTFRPVSVDH
                     IDDHEMHSEYYQMSQETADILNQTKAAGHRIISVGTTSTRTLETIRSQFDTFQATSGW
                     TNIFIYPGFEFKAIDGLITNFHLPKSTLVMLVSAFSSRQFVLSAYHHAVAEKYRFFSF
                     GDAMIII"
     gene            complement(62689..63672)
                     /gene="ruvB"
                     /locus_tag="PTC28_000061"
     CDS             complement(62689..63672)
                     /gene="ruvB"
                     /locus_tag="PTC28_000061"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002448957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HDK5715387.1"
                     /translation="MMDGHEQVDEHTFELSLRPERLRQYIGQSTIKSNLDVFIQAAKI
                     REEPLDHVLLFGPPGLGKTTLSHIIANEMDVNLRTVSGPSIERPGDLAAILTALQPGD
                     VLFIDEIHRLSSVVEEVLYPAMEDFFLDIIVGKGDEARSIRIDLPPFTLVGATTRAGS
                     LTSPLRDRFGVHLRLEYYTEEELTQIIIRTAEVLGTAIDEESAFEIAKRSRGTPRIAN
                     RLLKRIRDFQQVKQDDMIYIETTKHALKLLQVDDEGLDYIDHKMMACIIEQYRGGPVG
                     LDTIAVSIGEERVTIEDVYEPFLIQKGFLERTPRGRKATPYAYEHFKYTSP"
     gene            complement(63701..64300)
                     /gene="ruvA"
                     /locus_tag="PTC28_000062"
     CDS             complement(63701..64300)
                     /gene="ruvA"
                     /locus_tag="PTC28_000062"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HDK5715388.1"
                     /translation="MYAYISGKLTALHPTHIIVETTSGIGYEIQTPNSYRFQKNLDQT
                     VKVYTSLIVREDAQLLYGFIDQEEKDMFLSLIKVTGIGPKSALAILAASSPNEVKRAI
                     ENENDAYLTQFPGIGKKTARQIVLDLKGKVVVTEEVSEGLLDIATEHEDLAVQEALLA
                     LEALGYSKRELKKVEKAMQQQIFSDVDEAVKYGLKQLIS"
     gene            complement(64314..64757)
                     /locus_tag="PTC28_000063"
     CDS             complement(64314..64757)
                     /locus_tag="PTC28_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HDK5715389.1"
                     /translation="MKHQFYIIREDVLPYVVKRVLQVKSSLKADQSLTIQEAVDMHDC
                     SRSAFYKYRDTIFPLEDVQQQTEVFTIILFVTDKVGILAQILEKLSELNLSVLTIHQS
                     VPTDQKASITLSLDGRNAKWGPYQIINELRQMENVYNVDIIGMNM"
     gene            complement(64785..66077)
                     /gene="obgE"
                     /locus_tag="PTC28_000064"
     CDS             complement(64785..66077)
                     /gene="obgE"
                     /locus_tag="PTC28_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020444729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HDK5715390.1"
                     /translation="MFVDQVKISLKAGDGGNGITAYRREKYVPFGGPAGGDGGRGASV
                     VFQVDEGLRTLMDFRYQRHFKAKKGDNGQSSNMHGKNAEDLVLKVPPGTIIKDVETGQ
                     TLADLVEHGQSAVVAKGGRGGRGNSRFATPKNPAPDFSENGEPGEEIDVTLELKLLAD
                     VGLVGFPSVGKSTLLSIVSKARPKIGAYHFTTIQPNLGVVETRDQRSFIMADLPGLIE
                     GASEGVGLGHQFLRHVERTKVIVHVIDMSGMEGRDPYEDYQIINQELKAYAQRLEDRP
                     QIVVANKMDMPDAEAQLEMFKEQLNDETVTIVPISSYTRENIDQLLYEIANTLEEVKD
                     IDFSAKEEEVGVNRVLYKHTPSQDKFTITRDDDGAYVVSGNAIERMFKMTDFNSEPAI
                     RRFARQMRSMGIDDALRERGAENGDIVRILGGEFEFVE"
     gene            complement(66206..66490)
                     /gene="rpmA"
                     /locus_tag="PTC28_000065"
     CDS             complement(66206..66490)
                     /gene="rpmA"
                     /locus_tag="PTC28_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009382703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HDK5715391.1"
                     /translation="MLKLNLQFFASKKGVSSTKNGRDSESKRLGAKRADGQFVTGGSI
                     LFRQRGTKIYPGENVGRGGDDTLFAKIDGVVKFERKGRDKKQVSVYAVAE"
     gene            complement(66501..66821)
                     /locus_tag="PTC28_000066"
     CDS             complement(66501..66821)
                     /locus_tag="PTC28_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000633692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal-processing cysteine protease Prp"
                     /protein_id="HDK5715392.1"
                     /translation="MINVDIKLNDEGQITDVIMDGHADYGEHGQDIVCAGASAVVFGS
                     VNAIIGLTSERPDIDYSEDGGYFHVRAVDTNNEQAQLILQSLLISLQTIEEEYNEYIK
                     LNLK"
     gene            complement(66824..67132)
                     /gene="rplU"
                     /locus_tag="PTC28_000067"
     CDS             complement(66824..67132)
                     /gene="rplU"
                     /locus_tag="PTC28_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000457386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HDK5715393.1"
                     /translation="MFAIIETGGKQIKVEEGQEIFVEKLDVNEGDTFTFDKVLFVGGD
                     NVKVGAPTVEGATVTATVNKQGRGKKITVFTYRRRKDSKRKKGHRQPYTKLTIDKINA
                     "
     misc_feature    complement(67144..67217)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00559"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L21 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00559"
     gene            complement(67253..67768)
                     /gene="mreD"
                     /locus_tag="PTC28_000068"
     CDS             complement(67253..67768)
                     /gene="mreD"
                     /locus_tag="PTC28_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HDK5715394.1"
                     /translation="MKSIYYILVAILMFYLDTVLTFLSPIIIGGHRFILVPHLVFLFL
                     VLITVYKNTSIALILGVLLGTVHDLFFGQIYGVYLFGYIVSILFADKFLKVFFRDHVM
                     VYVMTLIGIVFLEVFVVMLYLVVGLVDFNLIQFIVFRILPTLLLNAILLIFLYFAANY
                     FLNPKRSIDTK"
     gene            complement(67768..68604)
                     /gene="mreC"
                     /locus_tag="PTC28_000069"
     CDS             complement(67768..68604)
                     /gene="mreC"
                     /locus_tag="PTC28_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HDK5715395.1"
                     /translation="MSNFFKNNKLVVLFCALILFIALIGLSIRSHAQSVPEQYVSDTT
                     SFGQRVFSYPIHFIAGSISDIFHKTEKPTNKEKQLEAENERLKSENKNLKKELDMSDI
                     SKYEPITAAVIARQPDQWLNTIVIDKGKKSGIKENMAVMTADGLVGRVAKVNQFSSQI
                     HLITTKGRTNRLSVNVQHDGHEVFGLIDHFDEKTNHLIISDIDNNEKIKAGDKVVTSG
                     LGDQLPKGLYIGEVKKVQNDQYGLSKQVAIETGANINHFDHVFIAKRDPKTIVNDEGD
                     GS"
BASE COUNT        20100 a        14351 c        11307 g        22981 t
ORIGIN      
        1 aatgtaaata aaagcaaaca atttactcga gtagtatgtt aaattatggg ctaatttaac
       61 accttttcat tttctgaagc attcgtcgca tgttcaacga cacgtagtaa tgtcccttga
      121 ttgattggat aaccggcttg tgtcactttc actttgcaaa tttgtccaat aagagattcg
      181 tcacctacaa attcaacttt catatagtta tctgcatagc caacgagtaa gccgtcttga
      241 gaaccttttt cttccggaat tacttctaat acatcatttt caaattttga agcataagtt
      301 ttagcaagtt gattgctcaa ttcaatcaat ttatggacac gttcattttt aatttcttca
      361 tcaatttgat catccatacg tgcagcaggt gtaccaattc gtggtgaata tggaaagacg
      421 tgtaattcag aaaaatgatg gttaacgata aaatcatacg tttcttgaaa ttctgcttca
      481 gtctcacctg ggaaaccaac aataacatcg cttgtaacgg ctaaaccagg taacgcagcg
      541 tgtaattttt gaatacgttc agaaaaatga gccattgaat atttacggcg catacgtttg
      601 agcacactgt ctgagcccga ttgaagtgga atgtgtaaat gacgtactac tttttgtgac
      661 tgttgcaata cttcaatcac ttcatccgtt aattggctcg cttcgattga agaaatacga
      721 atacgttcta agccatcaac tgtttctaaa tctcttaaca attgtgctag gttgtagtct
      781 ttcaagtctt gaccgtagcc cccagtatga ataccagtga gcacaatttc tttataccct
      841 gagttaacga gttgtgtcgc ttgttcaatt accttttttg ggtctcttga acgcattaaa
      901 ccacgtgccc atggaataat acagaacgta caaaagttat tacaaccttc ttgaatttta
      961 agagatgcac gtgttcgatc tgtaaaatat gggacatcta actcttcgta tgtacgattt
     1021 ttcataatat tgcttacacc gttaatcggt tgacgttcat cttgatacgt atcgatgtaa
     1081 tctaataatt tatgacgatc ttgagtaccg acaacaatat cgacaccagg aatttccata
     1141 atttcagctg atgacgtttg tgcataacat cctgtcacac atataaccgc atcaggattt
     1201 tgtcgaatcg cacgtcgaat aatttggcga ctctttttat cacctgtatt tgttactgta
     1261 catgtattaa tcacgaatac gtccgcattt tgttcaaaat ccacacggtt atattctgca
     1321 tctttaaata actgccaaat tgcttcagtt tcataatggt ttactttaca ccctaatgta
     1381 tgaaaggcaa ctgtagacat agattcaccc cattaattct atttcgtagc ttatggcact
     1441 taatgcataa agtggcgctg tttcagcacg taaaatacga ggtcctagcc ctacgctttg
     1501 tgcaacatct tcaaaaagtg cgatttcatt ttcagaaaaa ccaccttctg ggccgaataa
     1561 taataataca tgggacccgt gtttgaattg acgtaattgt tgcttaaaca gagcgcgttc
     1621 attttgttta gcagccgctt catatgccat aagcacacaa tcatattgac ctatcatatc
     1681 atatatttcg tgtaaattcg agacaaattt cacttgaggc acggcttgac gataactttg
     1741 ttctgccgct tctttcacta ttttttgcca acgttcaacc tttttggcag ctttttgttg
     1801 attcagtttc acgacagaac gatccatttg ggtaatgatg aacgatgtcg ctccaagttc
     1861 agtcgctttt tgtagtaacc attcgtattt atcgccttta attaaaccgc tacaaattgt
     1921 aatattcaaa gggagctccg tttctacttc aatacgttcc acagtttcaa tcgtaatacg
     1981 ttgcgcttca atatcaataa ttttgcagcg atacgtgacg gcatttaaaa agttaataat
     2041 gagtgcgtcg ccaacgtttt gtctcatcac acttttaata tgatgtatat cattattgtt
     2101 agtgataaaa aaacgctgat gctgctcagc gttttcattt aaaaagtatc tttgcatgtt
     2161 aattcacctt ctgaccgatg atacaaatcc aaccttcatc gtttttaact tctttaattg
     2221 tgaaccctgt ttcttccatt aacgtttgaa cagactcacg tttctcttca ataataccag
     2281 aagtgataaa atagccttca gggtttaaat gatcatatgc atcttgaacc attttttcaa
     2341 tgatgtgcgc taaaatgtta gcaataacga catcatattg gcccttttct tctgtcagta
     2401 aattacctgt tgccgtttca atcgcgtcta aacaatgatt cttttcaaag ttttcttttg
     2461 caacttggac agccatttca tctaagtctg tcgctttaat tgattgcgcc cctaataaat
     2521 atgaagcgac acttaaaata cctgaacccg tgccgacatc aatgacacgg tgctctggtt
     2581 tgacaatctg ctcaagcgct ttgagacaca tacttgtcgt tggatgatct ccagtaccaa
     2641 aggccatacc tggatccaat tcaatataaa gctgcgtatc atcacgctcg acagattccc
     2701 aactaggtac gatgaaaaag cgttcagatg cttgaaatgg atgaaagtaa tttttccatt
     2761 cgttttccca atcagactct tggacgaact tttgttctat catcaacaca tctgggtcta
     2821 ttaagggtga agcttgaagt tttgaaaata tgttattttt caatgtttcg tcatattgta
     2881 aatcattaaa ataagcttta acaatcatat gttgctctgg atagtcagct ggattaagtt
     2941 caaaaatttc tccaaaacga tcttctcgaa ttttagaaat ctcacttgag tcttcaatcg
     3001 caacaccgtt agaacctgct tcttgtaaaa tttcagtggc gatagattct gccgcttggt
     3061 taacagttac tgaaagttcg atccaattca tgggttattc tcctttaaaa aaacgacgtg
     3121 ctttatcttt aaaatttgaa ggttgttcgt tcactgtttc tccagacatt tcggcaaatt
     3181 cttttaacaa ttcacgttgg cgctcgttaa ggccagttgg tgtttgaaca cggatgttaa
     3241 caaataaatc accatagcca taaccgtgga catttttaat ccctttacct ttaagtctaa
     3301 attgtttacc tgtttgcgtt ccctcaggca ctgttagcat aacatgccct tttaatgttg
     3361 gaattttaac ttcgtcacct aacgcggctt gtgcaaagct aatattgtga ttgtatagaa
     3421 tgtcatcgcc ttcacgtgtg aatttatcag atggctgcac acggaaaatc acaaaaagat
     3481 caccagctgg tccgccattt tcacctggtc caccttgtcc tgctaaacga atttgttgat
     3541 cattatcgac accttcaggc accgtcactt caagtttaac attttttaat tctgtacctt
     3601 taccgtgaca tgttggacat ggttcttcaa attcttcgcc agtaccatta cattcaggac
     3661 aaactttttc agttctcaca cgtcctaaaa tagtattttg ttcgacagaa acgtgacctg
     3721 ccccatgaca gtatgaacat gttttctttt tagtacctgg tttagcacct tcgccaccac
     3781 atgtatgaca tgtcacttct tttcgaattg aaatttcttt ctttgtaccg aatacagctt
     3841 catcaaaagt gacagtcatt gtgtattgaa gatcgtctcc gcgacgtggc gcattcggat
     3901 cacgttgacg ttgtgcacca ccaaagaact ggctaaagat atcttcaaag ccgccaccac
     3961 cgaatccaga gaagtcttga ccaccaaatc cctgtccaaa gccaccttga gggccactat
     4021 gaccaaactg atcgtattgc gcacgtttat tttcgtcact taatacttca taggcctcag
     4081 agatttcttt aaatttctca tctgaacctt cttctttatt aatatctgga tggtattttt
     4141 tcgataattt acggtaggct tttttgattt catctttact cgcacttttc gacacgccaa
     4201 ggacttcgta ataatctcgt tttgccaatg cactctctcc ttttgatttg attttttgaa
     4261 taaaaagagg ctgggacgat tgaatgtcct agcccctttg agcgaccttt tacagtcaat
     4321 ttatatgatc gaatgaccta tttttgttga ttgtcgtcgt cgtttacttc tttaaattct
     4381 gcatcttcaa cagtactatc gttttgagaa gtattctcgc caccctgttg tgcagcttgt
     4441 tgtgcttgct cataaacttt cattgataat tgttgcacga cttgttctaa agcttctttt
     4501 ttcgctttaa tgtcttcaat gtcgctacct tctaatgcag tttttagttc gtcttttttc
     4561 gcttcagctt cttttttatc ttcttcgctc acattgtcgc ctaagtcttt caatgttttg
     4621 tcgacttgga atacaagttg atccgcatca tttcttaaat ctacttcttc acgacgtttt
     4681 ttatctgctt cagcgttttg ttcagcatct tttaccatac gatcgatttc ttcatcagat
     4741 aatgcagaag atgattcgat tgtaatgttt tgttctttat ttgtacctaa gtcttttgca
     4801 gttacattta caataccgtt tttatcgata tcaaatgtta cttcgatttg aggtacgcca
     4861 cgtggtgctg gtggaatatc agttaattgg aaacgaccta atgttttgtt atctgatgcc
     4921 attggacgtt caccttgtaa aacgtgaatg tctacagctg gttggttatc tgctgctgta
     4981 gagtaaactt gagatttaga tgttggaatc gttgtgtttc tttcaattaa cgtattcata
     5041 cgaccaccca taatttcgat acctaatgat agtggtgtta cgtctaataa tacaacatct
     5101 ttaacatcac cagtgataac cccaccttgg attgctgcac ccatcgcaac aacttcatca
     5161 gggttaacac ctttgtttgg ttctttacca atttcttttt taattgcttc ttgtactgca
     5221 ggaatacgtg ttgaaccacc aactaagatg acttcatcaa tgtcagcgtt tgaaagaccg
     5281 gcatctttca ttgcttgacg tgtaggtccc atcgtttttt gtacaagatc atatgccaat
     5341 tcttcaaatt tcgcacggct taaagttgtt tctaaatgca atggacccgc ttcaccagct
     5401 gagataaatg gtaatgaaat ttgtgttgaa gatacacctg ataagtcttt tttcgctttc
     5461 tcagcagcat cttttaaacg ttgtaatgcc attttatctt gtgataagtc gacaccattt
     5521 tcagatttga attgttgtac taagtaatca ataatcactt ggtcaaaatc gtccccacca
     5581 agtttattgt caccagctgt tgctaatact tcgaatacac cgtcacctaa ttcaagaata
     5641 gatacgtcga aagtgccacc accaaggtcg aatacaagta ctttttcatc tttgtcagtt
     5701 ttgtctaaac cgtaagctaa tgctgcagct gttggttcgt tgatgatacg ttcaacttca
     5761 agaccagcga ttttacccgc atctttagtc gcttgacgtt ctgcatcatt gaagtaagca
     5821 ggaactgtaa taaccgcttt ttcaactttt tcacctaagt agctttctgc agtgcttttt
     5881 aagttttgta aaatcattgc agaaatttct tgaggtgtat aagatttacc gtcaatattt
     5941 tctttatggt ctgtacccat gtaacgttta atagattgga ttgtattagg gtttgtgatt
     6001 gcctgacgtt tagcaacttc cccaacttgt gtttcaccat ttttaaatgc aacaacagat
     6061 ggtgtagttc tagcgccttc agggttttga ataactttag gttcgtcacc ttctaatact
     6121 gatacacaag agtttgttgt acctaagtca attccaatta ctttactcat agtcaaattc
     6181 ctcctaattt tcaaacacaa ttattttcac ataaatggtt ttcttcgtca aaattattga
     6241 tttactttta ccattgaagc acgtaacact ctatctttca actgatagcc agcttgtaat
     6301 tcttcggtaa tttgtccaga ttcaaaatcc ggattttcat cttgcatgac tgcttgatgg
     6361 aagttcggat caaactgttc accttctgtt ttgatttttt ctaatccatt atcttctagt
     6421 gcttttaata ggctctcgta aaccatttcc acaccttttt tcagtgcgtt aaatgattca
     6481 tcatcacctt caatttttag agcacgttca aaattatcaa gtgctggcaa tacatcagta
     6541 agtacttttt gtgcctgata tctcttttgt gtttgcgctt cgttttgaat acgtctttta
     6601 taattttcaa attctgcata taaacgcaaa tattgttctt ctttcgcatc aacttcagct
     6661 tttaaagaag caatttcctc atctttaaga tcttgctttt catcattgct tgcatcattt
     6721 tcgttctcag agtcttgatt tactgcaact tgttcatttt ccacttctag ttctgaagtt
     6781 tctgttgttt cttgtgactc agtttctttg atttcttcgt ccttacgcac gtctttttcc
     6841 tctgacattt tcaaacctcc attacgttta aacatttcgt atcacctcgt tatgaaatcc
     6901 gactcaacaa ttgtatcaca ttatgataat gcatagcagt aggaccaata acagcaatat
     6961 gacctgttaa atctttatct atttgatatg atcggcttaa tatcgcaatg ccgtgtaaat
     7021 tttgttcaat atcggtccca atacgtacat taatcaattg gtcagacata tgatgaatca
     7081 catcagcaat acgatcggac tcaatatatt ttaatatagg ttgtatggac gccacagtcg
     7141 actcgtttaa tccttcaatg agttgatgtt taccacctaa ataaacacgc gtagattgat
     7201 tgttacggta ctgatgcaac atgtgtaaaa tacgaacgat taaatctgcc tcttctgcat
     7261 taaatcccag catgcgatac acttctatgg attgcacatc attaccatca aaaaattgac
     7321 gcacgttcgc agatagatag ttggatactt taatgatcga atgatcagca taaggttgat
     7381 cgcttgtcac atgcagatgt ttcacttgtc ccgtctcatc aatcatcact acgattaaat
     7441 ggtgtggatt taacttcatc aaatgcacat ccagtataga ggcctttgag tgatcaggtc
     7501 ctataacaag agtggtataa tgtgcttgat ttgaaaacac ttttgcaaag gtgtctaatg
     7561 tcgatgataa atcataatga tgattcacta acatctgatg aatatcaaga ctaccttgca
     7621 tttcaaaatt atagggttgt tctaacaaat gattggcata gagtctaaat cctgcttctg
     7681 aagggattcg accagaagaa aaatgtgttt tagtgatgag tgaattttct tctagtgtct
     7741 tcatgtcatt acgaatcgtc gcaggactga catccacatt gtgcctttgt attaatgtgt
     7801 tagatccaat aggttgtcct aagtcaacat aatcttcaac aattgcagtt aaaatcttca
     7861 attgccttgg cgtaatcatg tttttcacct cattagcact ctttctctgt aagtgctaat
     7921 tataatttat caaattggtc aaagtaagtc aatgttaaag catcatttct caaaaaactt
     7981 tttatacttg aataaatgcc tcaaacaccg tgtttccgac aattcttcct ttatccgtta
     8041 aagcgatgtg tgtatcggtt tggtcaatga gattttgacc ttccaaagag atgatttctt
     8101 ttgcatagat agcttcaatt gtttgatgat atttcttttg gaactttatt ttatcaacac
     8161 cggtattcat tcttaatcct agaaacattt cttcttcaat ttgttcttta acagtcggag
     8221 tcgtttcagt taaacgcgga aattcatgtt gttggatttt tttaatgtag tgattgaccg
     8281 gattaacatt tgtataacgt accccaccaa tataaccact cgcacctgca ccaaagccat
     8341 aatagctttc atttttccaa tagacttgat tgtggataga ttcatgccct tttttagcaa
     8401 agttagaaat ttcgtattgc tgcaatgggc tatttttcat acgattcatt aaatattgat
     8461 acatttctgc accgacatct tcgttaggca tttttagttt ccctttacga tactgattat
     8521 aaaactgtgt ctggggttct agaattaagc cataactgga taaatggtcg atatcaaggc
     8581 ggagtgcttc ttctaaactc tcttgaaatt gttgcatact ctgaccaggc aaatgataca
     8641 ttaaatctaa actaatggat gaaatacctt gtcgacgtgc attgtctatc gcttgataaa
     8701 tatcagcttt acgatgactg cgacctaatg tttgaagtaa agtatcgtca aaagtttgta
     8761 cgccaagtga gagtcgattc acaccgtatc gtttcaatag cgccactttt tcttctgtca
     8821 gttcgtccgg attcgcttca aaggtgtatt ctcctttaat atcaaactgg tcttgaattg
     8881 cttgtaataa atattctaat tgggattcag ataatgcggt aggcgtgcca ccaccgacaa
     8941 ataacgtctc taattgagat gctttggatt gtttcatctc ctcgaccaag caagccaaat
     9001 atagatcgac aggctgattt tggatgaaat atttattgaa atcacaatac gtacagattt
     9061 ttacacaaaa aggaatatga atataagcac tctttgccac cattagtatt cacctcataa
     9121 aatatgcccc ctcgacacct caagatgcgc gggagcatga aattttcact ttattcatcg
     9181 tccattttca gtacagctaa gaaagcatct tgtggaattt ccacactacc aacagctttc
     9241 attttggctt taccggcttt ttgcttttct aataatttac gtttacggct aatgtcacca
     9301 ccataacatt tcgaaagtac gtttttaccc attgatttaa tgtttgttct agcgacaatt
     9361 ttatgtccta ctgcagcttg aacaggcact tcgaattgtt gtctagggat taacgttttt
     9421 aatttttcta caagtgtttt accacgttca tatgcaaaat cacgatgcac aataaaactt
     9481 aaagcatcta ccttatcgcc gttaagtaaa atgtccattt tcacaaggtt actttcttta
     9541 ttctcgataa attcataatc aaaagaagcg taacctttcg tgttggactt caattggtca
     9601 aagaaatcaa aaacgacttc tgacaatggt aattcataaa cgatacttac acgaatatca
     9661 tccaagtaat ccatattgac aaactgacca cgtttacgtt gacacagttc cataaccgct
     9721 ccaacataat catttggcac catcatcgtt gcacgtacat aaggttcaaa cactttatcg
     9781 atttgatctc tgtcaggcat ttgtgctggg ttatctacat gaatctcatc accatttctc
     9841 aaaataactg tgtaaataac ggatggtgct gttgcgataa gttcaattcc aaattcacgt
     9901 tcgatacgtt cttgaatgat ttccatatgc aacataccga ggaagcctgt acgataacca
     9961 aatccaagtg cttttgaaga ttctggttcg aattctaatg acgcatcgtt taactgcaat
    10021 ttttctaatg cttcacgtaa atcattgtag tctttattgt caattgggaa aagaccacaa
    10081 tacaccattg gattcatttt cttataccct tttaaagggg tctcagcagg tctattagcg
    10141 tgggtaatag tgtccccaac acgtgagtca tctacatttt taatgcttgc gatgatataa
    10201 cctacatcac caacagttaa ctcttcaacc ggtaattctt tcggtgtatt aatgccgact
    10261 tcagtcactt caaaagtttt accagtcgcc atcatttgaa tacggtcacc cgctttaact
    10321 acaccgtcaa caacacgaat cgaagaaatg acaccgcgat atgggtcata ttcagagtca
    10381 aaaatcaatg ctttcaatgg tgcagctggg tccccgtctg gaggtggaat catttcaaca
    10441 atcttttcta aaatttcttc aataccaatg ttagctttcg cactcgctag tacggcatca
    10501 tctttgtcta aaccaataac atcttcaacc tcttgtttca cacgttctgg ttcagcagct
    10561 ggtaaatcga ttttattaat gacgggaatc agttctaaat cattgtcgag tgctaaatat
    10621 acattcgcta aagtttgtgc ttcgatacct tgtgcagcgt ctacaactag aatcgcgcct
    10681 tcacaagcag ctaacgaacg tgacacttcg tatgtaaagt cgacgtgtcc tggtgtatcg
    10741 attaaatgga acgtgtaggt ttgtccatct ttagcatcat attttaaacg tacagcattt
    10801 aatttaatgg tgataccacg ttcacgctct aaatccattg aatctaacag ttgtgcttgc
    10861 atttctcgag attcaacaga ctttgtattt tctaaaattc gatcggctaa agttgatttt
    10921 ccgtggtcga tatgcgctat gatcgaaaaa ttcctgatat tttcacgtct atttaaacgt
    10981 tgttggttat ccatatcatc atactcactt tcataagttt acccgtaaat taacgattac
    11041 atctttgcta taataacgtt tttaagcatt aattgcaact ctatcatgac gcaaaatgat
    11101 aagtgaaatg cattaattca atacttcaaa tagaaatcat tttcgtcatg gtcacacttg
    11161 cattaaagaa atgatattgt cacgtcagta catgtcgtcg aaaaaaataa ttcaacggtt
    11221 caattaatta ttgcactatg aatagagttt tgatagaatg aatcttgttg taatcaaatt
    11281 attttgatac gaattcgatt ataggaggtg tctttcatgc caaatatcaa atctgcaatt
    11341 aaacgtgtga gaacaactca tacagcagaa agcaaaaaca tttcacaaaa aaatgacatg
    11401 cgttctgcag tgaaaagcgc gaaaaaagca attgaaacta atgctgataa taaacaagaa
    11461 ttagtaagca aagcagtgaa acgtattgat aaagctgccc aaaagaattt aattcattct
    11521 aacaaagctg atagaatgaa atcaaaatta atgtcagcaa aataatgaaa aagagctgtg
    11581 ccatttgagg tatagctctt tttcattgtg cgctctccca actttcattt ttatagtgtg
    11641 agaacgacac gtgtgcatat atcacactca tatgctgaag tgatacacgt gtctatctat
    11701 catatcgcct tcctaaagcc ttttgttata ttcatccttt acaatttcat aataaacaat
    11761 tctaaaatca acaccttatc catataagac gatttcaatt gatagtctgt ttctgtacaa
    11821 acatccataa tggtcaacaa cgtgtctaaa tcatattttc gtgcttgatt caatgcgagt
    11881 tttacgcgat aaggatggac acctaccgtt ttggcaatct gctgaccaga gtatcctttt
    11941 tgattgagaa ttttactttg gtaatataag cgatagttac ttgtaattaa cgccaacagt
    12001 ttaatcggct cttcttttaa ttggattaaa tctttaacga gcgaaatagc ttgtgccttt
    12061 tgtccttttt gaatataatc cgtcaataaa aaaacgtttt gctccaaact tctattcact
    12121 atcgtctgga catcttcttt attaatcgtt gggcgatcac cgacaaacaa caacaactta
    12181 tctaattctt gcttaatcat acgataatga atgcctgtca actgaatcaa cgcttctaat
    12241 gcatcttgtt taatttcttt ataggactga ttcaaatatt gatgaatcca tttttgcatt
    12301 tcttgttcag tcatttgttc aattttcttg atgttcgcca cttttctcaa tgctttaaca
    12361 actttttttc tttcgtctaa cttcaccgct tgaacttgaa aaataattaa agaagcctca
    12421 tcatactttt caataaactc taataagctg tcagcgtttg tctgtgcctc tttaggtggt
    12481 ttttcaccgg taaatatata gctattttgt acaacaataa tctttttatc cgaaaaaaat
    12541 ggaagtgtca ttgcttcttc aatgattgta tttaaagtcg tttcatacaa gttgtattta
    12601 acataattaa agtcatcttt aggttcattg cccaaatact tttgagtaag ttgttctgtt
    12661 tcacgatcta ttaattctgg gacttcaccg tgaatgacat gaatatttga catgatgtga
    12721 ttcctctcta tctcattgct ttagctgtat tataacatga atgttaagcc gacttcatta
    12781 tcagttcaac ggttctgtgc gcaacgtata acctgcttca ttgaacgcat caaatcggac
    12841 atgaatatga tgattatctg cggtgttata aattttcgca tgaatgtcat gtaatttttg
    12901 tagcgttaaa ggatgtggca aatgatacat attttgttta ccagcagaaa tgagtgcgat
    12961 gtctggatga atttgactca gaaaggtctt agaggaactt gtccgactgc catgatgacc
    13021 tacttttaat atttgaattc gtggtaacga atattgcttt aacaagacat cctcattttt
    13081 tgtcgtagca tcgcccatca ataaaacatg aatatcgtga attgtagcta atgtcacaat
    13141 agaatgctca ttggggtcct cactttcagg aatgtcagtg ttgaaaaatt gaaattgaaa
    13201 atcacctaag acaatacgag agaggtcctc atatgaatac aattgtgcat gttcacttgc
    13261 aatcacatgt tgaacctttt gaaacttctc atcatcaaaa tgtgatggat taataaccac
    13321 atttttgatg ttcacatatt gtgataaatg ttcgatttct cccatatgat cttgatgtgc
    13381 atgtgtaatg acaagatagt cgatttggtg aatccctaat ttcttaaaca atggataaat
    13441 atttttcttt gtaatattaa tattcgactg tttgcgttga tgatgttcat atgcgccacc
    13501 cgtatcaatc atgagtgttt cacccgtttg gctttggaac aatatagcat caccttgacc
    13561 cacatcaatc atggtcattt ggttagtaaa acgaggatga acttgccata gtaagatgca
    13621 cagacaacaa accagaacga tagaaatgat atatcgacgt tgagaaagca aataaagtag
    13681 tataaacgtt gctatcgtac aacaaagaaa tccaaactct ccaaagtctg gtattggaag
    13741 tgtgaacctt tctagcactg tgagtctttt taataaaaaa gcttggatat caaaaataac
    13801 gtgtgtgaag tgcgtgaaca tagataaaaa ggcaggtgta acaatcgcaa tgatggcaag
    13861 tataaacgac agtggaatga tgattatact gtaaagtggg atgaagaata agtttgagat
    13921 taacccttgc cattgaatct cattaagttg cacatagttt aaaggaatgg ctgcaataac
    13981 agcaatataa gaacctaaaa agagcgattg ataaatagga cgctctgtaa aaatatcttt
    14041 catcaaaatc aatatccctg aaatcaaaaa agagtataaa aagcctaaat gatagtgata
    14101 gtcgctattc atcagactca taacaaaata aacgagtaaa agcgactgca gtgacgtcat
    14161 atgaaagtac cttgaaacta tgagtaggag caacgtcata gctaccgcac gtgtcgcact
    14221 tggactggta cctacaaaga ttaagaatac cggtaaaaag agtattaatc ccacttcggt
    14281 ataatacata ggtaaaggga gacgtttccc aattgcataa aacatgaaaa tgaatatact
    14341 cacgtgggtc ccgctcacag caaacaaatg agaaataccc aactgttgtg ctaatgactt
    14401 catatcttta tctaaataat tcgcgtttcc cgttgcaatc gcgatcagtt cgccttttcc
    14461 gaaaagttgt gaatttaaca gtctttcagt tacgacactt cttacatacg ttatgcgttg
    14521 ttttaacgtc ggtgttgtca tatgacattg atcaaatgtt atttttttaa cggcaaagag
    14581 cggtcgttgt tggcgataaa gtggtggttg aaaagaacct gttaattgac attggtgatt
    14641 gagaagaaaa tgcgcatctg ggatgaattg ttgtggttta atacgccctt taatcagtat
    14701 ttcttgttta ttgaatgttg cttgaacagt taaaagttgg tctgtcacaa taggtaacgt
    14761 cgtcaaatgg acgctaatcg ttttatggga tgaggtcggg gttggtgtta gggttgaagg
    14821 ctcattttta tgttgtatcg tctcgatggt ataaccaatg agcacaataa tcaaggttga
    14881 aatgatgaat aaccatgact ttttctttaa gtataaactg catgctaaca cgctatatat
    14941 gaagcatgca gttaacaaat gatgataagc aatattgccg ataatatatg taattaacca
    15001 ataagtcatt atgatttcaa taaatattcc gcaatgtgtt gacgattaaa actgattttt
    15061 tcatagtgca caccagattg ttctaatagc ttcactgcat aattatgatt atggtaatct
    15121 tcggcataat aaatcgtttt aattccagct tgaataatcg attttgtaca gtttaaacaa
    15181 gggaaatgcg tgacataaat tgttgcattt tcagtagaga caccttgttt cgcacattgc
    15241 aggatagcgt tcatttcagc atgtatcgtt ctaatacagt gcccaccttc cattaaacag
    15301 ccttcatcta tacaatggac ttcacctgaa actgaaccgt tataacctcc cgcgatgatg
    15361 cgattatctt tagtaattgt tgcaccaaca gagaggcgtg tacaagtaga tctcaatgct
    15421 aataaatgag actgtgccat aaaatattca tgccattgaa tacgtttcat actttttgtc
    15481 acctcgtatc gttgttcatt ttattcttat tataaaggat tcgacttgct tcgactagtt
    15541 acaccctatt taggattaaa ctgttaaata gttctttagt ttttcaaatg ttttttcccc
    15601 aattcctttg acatttttta aatcttcaac actttggaaa ggtccatttt cttcacgatg
    15661 tttaataatc gtttgcgctt ttgaaggccc tatgccagga atttgggtca gttccttctc
    15721 gtcggcagta tttaaattaa cagagatgtt ttgtgaagta gacgcagctg acgtatcatc
    15781 ttgttgtgat gcatgactag agttagaggt tgtcacttca cgttgatccg gaatataaat
    15841 cattttttga tctgttaact tttccgctaa attaacacga ctcaaatcag cagtattcaa
    15901 cggttctgcc ttatctaata gctgtttcat tcgatcatct gattgcattt catacgtatt
    15961 cggttttttt actgcgcctt taatatcgac aataattttt tgaggcgtct gtgaattttg
    16021 ctctttttta tctttacttt tcgattttgc ttgatgcacc tcaatcggtt gcgtttgttg
    16081 cattgctaaa ttatcttttg cagggtcttc ctcaccagaa ttaaagacaa gccatcctcc
    16141 aatcgcgatg aagattgcaa taacaacagc tgtttgcaat ttgtactgtt tgactaacgc
    16201 gatgatttga tttacagaaa acataaataa aacctcctat catacgtatt acacgcatga
    16261 tggaggtttt ttacttgtta tttttttaca ataaagaata agcggtcact ttctggggct
    16321 tgtaaagctt tattaaaatc ataaaatgtt tcgatatgat taaaaccgac ttgtttcagc
    16381 atatcgatat actgatcctt ttcaaaagtg cgctgatatt gtgattcatc ttgtctgacg
    16441 taagtttgtg cttcatttaa tataaagaat gttaaatcat gccaaacact gtatggtgct
    16501 tcagcaggtt cagtttgcca tactaatgtt aaatcttcac ggtcatcaag ataaacttgt
    16561 ccgttaaact gatgtgtcat tttatgcgtc gtatggacgt cgaaaatgaa gtagccatct
    16621 acattcaaat gttggtaaac atgttcaaac gttgccacca cagccgtttc atcagctaaa
    16681 taattcaaac tgtcacaaag aattgtaatt aagtcaaagt cggtattcag attaaaatcc
    16741 gacatgtcac cttcaatcca ttgcacttga cttgattttt gtttggctaa aactaacatt
    16801 tcaacactta aatccatacc catgacttca tcagcaaatt gcgtaaaatg ctgtgtcaaa
    16861 gttcctgtgc cacaaccgat gtcgagcaca cgagaaacct tttgttgttg aagtgtctgt
    16921 tgtatcaaat cgagccacag atcatagggt tgatcatcgg tgagtcgatc gtaaaatgca
    16981 cttaagtttt catattgcat tatgagttaa taacctcttt ataacctaac atctcaacat
    17041 cttgatacaa tttttcaagg ttgtaatagc tacgttcgtc cttatggaag acgtgtacaa
    17101 caacatccgt taaatctaca agtatccaac gcgcttcatt aaaaccttcc atacgcttca
    17161 cttcaatttg gtgtgactca gcactttctt taacagcacg agcaatcgct tggacttgtt
    17221 tttcgttatt cccatgacat acaacaaagt aatcagtgag atcagaaaca ccactcatat
    17281 taagcgaaat aatttcttcc gctttttttg catcggctgc ttcaactgtt aacattaata
    17341 aatcttttgc gttcatttaa tcatccttta ttttagagtc attaaaatta tagtagttca
    17401 gacaatcaat agtggattgg tacacgctaa catctttttt gacgaggtac aagacagttc
    17461 tttttgaaat ttcataaatt gttttatcta acccaccgcc attgtatacc aaatcacgaa
    17521 tttcttccac ttttggcgta tttcgaccag gttcaatata gtcagcaata aagactaatt
    17581 tttcggtttt agtcatgtgc ttacggccag ttgtgtggtt gtatattgct aataaaattt
    17641 cgtcatcttg gataccatat tgatgcttca ttattgctgc acatacaggt ccatgtaaaa
    17701 tctctgagcc ataacttaat aaatcatggc cgagatcata tcgtgtcact tgctggtata
    17761 aaaagcttaa atcatcatat ttacaaaagt catgcaaaat ccctgcaagt tcggcttttt
    17821 ctttatctcc ctcataaatc tctgccaatt tgactgccgt ttcagctacg cgtaaagaat
    17881 gttcaaatct ctttttcggt agcttttgtt cgacaagttc aatcgcaaat gttcgatcca
    17941 tataacccct ccttcaatat gtagtgctcg acattgagcg gcacccacat atgaattgtt
    18001 tgttgttgag accttctctg acgaatttca gttgagctga tcgccatctc tggtatgtta
    18061 accatcatga ttgcatcgtc atctgattga atcacagcac cacgattcac gacgacaaat
    18121 gttacaaaag atttcagagc atcaatttca taccaccgat caagttgctc atattggtcc
    18181 gttccgatga caaaaaataa ctttgcatcc ggtgattctt gacgtatatt caacaaagta
    18241 tcgtaagtgt agctttggcc tttacgttca atttcatcta aacgaagcgt tccaaacccc
    18301 aaattttcta tgaccaactt aaccatttga atacgatgtt caacctcaat taattcatca
    18361 tgctttttca gtggtgacat aaaactaggc ataaaataaa agtgatccgg ttgaatagtt
    18421 gcattcactt cacttgcaac catttcatgt ccactatgaa tcggattgaa ttgtccacca
    18481 taaacaacga ttttttccat atttatggta actcgatttg tttattttct cgagattctt
    18541 tatagaggac aatcatcgaa ccgataagtt ggactaattc actatccgtt gcttgactaa
    18601 tattttgtgc caattcgctt ttatcatcca tattgttttg taaaatatga attttaatca
    18661 attcgcgatt ttcgagtgtt tcttttaatt gctctaccat attttcgtta atcccagact
    18721 taccgatttg gaaagtagga tcaacatgat gtgctttact tcttaaaaat cttttttgtt
    18781 tacctgttaa tgccataatg gcctccttaa gtcgttgttg gatttaattt atttaatact
    18841 gcgttgcgca tcgtcgtaat atcactctct aaacctgtcc atattttaaa actttcagca
    18901 ccttgataaa taaacatatc taatccatta taagtcgaaa attctttttc agcggcttct
    18961 tttaaaaatg tcgtctgaaa tggaatgtaa ataatatcac atacaagcac atcagctttt
    19021 aactgtgcaa atgacatgac actgtcttga gattgatgca tcccaagagg tgtcgtgtta
    19081 ataataatat caaattgatg ggcgatagat gcgacatctt caagtgagtg cggttgaatt
    19141 tgaagttgcc aatcattgaa acgggccatt gtacgatttg caacggctat tcttttatca
    19201 gacacttgag ataacgcata agcaatacct ttacttgcgc cccctgcacc gagtattaaa
    19261 atgtgcgcac cagttaagtc accatatttt acctgtaatc ctttgacaaa tccagtaccg
    19321 tccgtgttat agcccatcca tttcccgttt tccactttaa ctgtattcac tgcaccaatg
    19381 gctcgcgctt catccgacat gtcatctaaa tagttgataa tacgctcttt atgcggaatc
    19441 gtcacattaa aaccgtcaag ttctttttca ctaataatat cgcgaatatg ctcaaaatgt
    19501 gttggtggaa tattaagtgc ttcatagtcg taatctaagt ttaaactttt aaaattcgca
    19561 tgatgcatca gtggagataa tgaatggtca atcggatgtc caattactgc aaatttcatt
    19621 gaatctcaca ctccttacat aattgaaggt ctcaatgtca cttcgacatt ttgaggtaca
    19681 atcacttgta attctgcacc tgcgtccaca gtgacaaagc ctaaacctga aatcataatg
    19741 tcttttttct cattttccgt cgttaaacga actgttttta actgttcaaa gtcaaaacga
    19801 tctttcgggg acggtggtga taatagtgta ccaatttgtt tgcgccacaa ttcatctgct
    19861 ttttctaatt ttgtgcgatg gatattcaat tcatttgaaa aataacaaac gagcggacgt
    19921 ttaccacctt ttaaataatc gacacgcgct aaaccaccta taaataacga ttgtgcttcg
    19981 tttaattgat atacacgttg cttaatttct tttttaggca taatcgtatt taatgcctta
    20041 gtcgacacat aatgggtcat ttgatgttct tgaataatcc ctggcgtatc atacatatag
    20101 tgtttatcat caatcggaat atcaatcata tccaatgtcg tacctggaat acgcgaagtt
    20161 gtgacgacat ttttttcgcc tactgtttgt tcaatcaact tgttaatcaa cgttgacttt
    20221 ccgacgttcg ttgtaccgac gatatagaca tcttggccat tacgatgctt ttcaattgtt
    20281 tgtaataaac catcaatacc aatgccttta tatgcagaaa ttaaacatac atcttcagga
    20341 tataaaccgt attctttagc taaacgtctt agccattcag aaacacgacg cttattgatt
    20401 tgtttcggca ataagtcaat tttattagca actaaaataa tctttttatt gccgacaata
    20461 cgcttgaccg catgaataaa agaaccttca aagtcaaata cgtcgactaa atttacaaca
    20521 atacccggtt tgtctgataa gccgtttaat aattttaaaa agtcgtcact ttccatgccc
    20581 acatcttgca cttcattata atttttcaat ctaaaacaac gacgacaaat gacatcttct
    20641 ttttctaaac ttgcttttgg aacgtaaccc ggtttttgtg ggtcgtcaga ttgtaatgtt
    20701 gccccacaac caatacattt taaagtttca gtcaattacg attcctccca tttaatatag
    20761 ccttttcttt taaaatgctt taataatcgt cgttcaacta aacgattaaa ttttgtgata
    20821 aaaccatctg aatttttcac cggtacgacc ataattgtat aaaggccgtg tcgattacca
    20881 ccaaatacat ctgttaacat ttggtctcca atcactacca cttcatcctt ttgcatgccc
    20941 atttgttcgg tcgcacggcg caatgctttc cctctaggtt tttgcgcttt aaaaatataa
    21001 tccactttta aattttggca aaaggatttc acgcgttgtt cattattatt agaaacaaca
    21061 gtcactttaa atccttgctc atctatagtt ttaaaccaat tttcaacttt aggtgtcggt
    21121 tgcgcttcat cccagccgac caatgtatta tccaaatctg tgataatccc tttgatattc
    21181 aattgtttca gtttgtcaaa atcaatttca taaatcgaat tcacatattg atttggtaaa
    21241 aataattgct tgatgatacc catgttcatc ctccacttta aaagacttca ttcgttatat
    21301 tatagcatat ttatgtgcaa tcatagtgtg ttttgtcaga gtactttcac aagttcgttg
    21361 accatttgac ttgatgactt tgctgctact ttaaggaaag cttcaaatgt cattcccgct
    21421 tcaccgtcag ctaaatcaga aatcgctcgt gtcacgataa aaggcacatt aaactggtaa
    21481 catgtttgcg caatggcagt ggcttccatt tcgacagcta atgcattagg aaaatattcc
    21541 aaaatagctt gacgctgttc gtttgtgccg ataaagctat cacctgaaac gattaggccc
    21601 tctctaccgt tttgatttaa agattttaag acgttatcta ctttttcaaa taatgacgta
    21661 tctgcttcaa aataagttgg catacctggg atttgtccca tatcatagcc gaacgcccgt
    21721 gcatcagcat cgtgatatgc gacttgtcga ctaatgacca catcgccaag tgctaagcca
    21781 ggctgtaatc ctcctgcaga tcctgtgtta atgatacatt ggggttgaaa acgatcaatc
    21841 agtaaacttg tagaaatggt tacattcacc ttaccgatac cgctttgagt taaaataata
    21901 tctttgtcgt tcaatgtccc tctataaaaa atggcatgtg cgattttaat ttcttctacc
    21961 gcatccattt gagattttaa aattgctact tcttcttcca ttgcaccgat gattccgatc
    22021 attcatatgc ctcctcaatc cattagctgt ttcattttat gtttaccgtt gtcattttat
    22081 catatttata tattagcgtt cagttttatc attgagatgt tgctgtcatt taacgaaagc
    22141 aaatgattaa acaacgatat ctaaagctat tctttcatac tcatactcga tttcaataat
    22201 caatcttata acaaattgag ggccaagaca actgaatgtc ctagccctta atcattaatc
    22261 ggattgaatt tttattggct ccacaatgca gctaaacctt gtaacgagaa gaagccggta
    22321 aagatagtaa cgataactgc aacaataccg aataataaca tccaagtggg gtgttgataa
    22381 tctccaacaa tacgtttatt tttcgaagca atcaatacag ttcctaaaat aataggaaga
    22441 atcaaaccgt ttaatgcgcc tgcaacaatt aataatttca ccggtcgacc gataaataag
    22501 aaaatcaatg tcgatacaac gataaatgtc acgacgacat aattatcata cgttctcaat
    22561 ttgttgtgca ttgttttaat aaatgtcgta ctcgtatacg ctgaaccaat aacagatgac
    22621 atcgccgccg caaacagtac gataccaaaa atatttttac cgattggccc aatagcatgt
    22681 tcaaagacag aagctggtgg gttttcagga tttaaagcga cacctgtgac aacaacacca
    22741 agtacggcta aaaatagtaa acttcgcatc acacctgttg ttagaatcgc tgaaatagct
    22801 gaatgattca caaatggtaa gtagtctttc cctttaatcc ctgcatcaag aatacggtgc
    22861 gcacctgcaa atgtaatata gccacctaca gttccaccta ctaaagtaat aatgggtaga
    22921 acaagtgctg aaggattttc tggcaatacc atacgttgtg ctgcttctac atatggcgga
    22981 ttggattcaa tcataacgta ggcaacaatt ataatcatga gtactccgag aatcatcgta
    23041 atgacatcca tgattttctg accattttta gaaataaaaa cgagaatcgc aataaccgca
    23101 gtaatcgcgg cacctacacg aacatctaaa ccaaagatgg cgttcaaacc tagtccagct
    23161 ccggcaatat tcccaatatt aaaagccaat ccccctaatg cgataaggag ggaaataaaa
    23221 gtacctaaac ctttaacaac ttcattagca atttcttggc cacgataacc cgttacaaca
    23281 aggacacgcc aaatgttaat ttgtgcccca atatcaataa tgatagataa taaaattgca
    23341 aatgcaaaac ttgctaaaaa ttgttcagta aacactgcag tttgtgttaa aaatgcaggc
    23401 ccaattgcag aagtggccat taaaaataca gagccgagta acaaccttcg atgcgtttta
    23461 gtgaatacaa attcacctgt ttttttaatt tgattggact gtttcttcat cacttaaccc
    23521 cctaaagtta caatatcgac attcacctct gataaacgcg aacgaatttc tttaacgaat
    23581 tcaagtgcat gtgccccgtc accatgaacg caaattgtat ccgcttcaat ttcaatcact
    23641 tcacctgaaa tcgctttaac tgtgccttcc gttaccattt gtaccacttg cgcaatggct
    23701 tcttcactct cttcaatcgt tgcgccttct tttttacggc tcactaattg tccatcactt
    23761 tcgtaacgac ggtctgcaaa tacttcagac gcgactttaa gaccttgtgc tttaccggca
    23821 tcaatgagta aagattttga taatccgact aaatacagat tcggatcaat atcataaact
    23881 gctgaagcaa tcgtacgtgc aatggtttca tctctgacag ccatttgata aagtgcgcca
    23941 tgcggtttga catgattaag cacgacacca ttaatatcac aaaacatttt taaagcgccc
    24001 acttgatata cgaccatgtt ataaatctca gttaatgaca tatccatatt gcgtcggcca
    24061 aatccttgta aatctggaaa tccggggtgg gcacctacac gcacgccgtt ttctttagca
    24121 cgtcgtacag tttcagccat cacattttca tcacccgcat gaaaaccaca tgcaacattg
    24181 gcagaagtaa tcaatggtaa aacttctcgg tcattgccga tttggtaatt accaaaactt
    24241 tctcctaaat cgcagtttaa atcaactttc atcttcattc ccctccttaa aaatacgatg
    24301 acgatctaag aatttaatgt ctacatcgcg tgcatcgcct tcataatatg gtggataaga
    24361 taatactgca tataagaaat ctgctgtcgt tgtaaatcca tcaatcacca gttcatctaa
    24421 tgtgactttt aatttttcaa tcgcatgcgc gcgattttca cctttaacaa tcacttttgc
    24481 gacgagtgaa tcataatatg aagaaacagt atatccacta taaagtaaag agtcaacacg
    24541 tacattgaat ccttggggta aatgcaacct ttgaactgtg ccaggtgtcg gacgaaatgc
    24601 tttttgtgga tcttctgcat taattctcgc ttctatgaca tgcccataaa aatgaacatc
    24661 gtcttgtgtg agcgaaagtg tgccctcttg cataatgcgt agttgttcac gtactaagtc
    24721 gatatctgta cgcatttccg tcactgtatg ctcaacttga atacgtgcat tcatttcaat
    24781 aaaataatat gcatcttccg tgacgagaaa ttcaatcgta cccgcactgc gatattgtgc
    24841 tgcttttgcg acttttacag catcattaca aattttctca cgtttttctt cagttaatgc
    24901 actacatggt gactcttcaa tcagtttttg gtttttacgc tgcactgaac agtcacgttc
    24961 ccctaaatga atatatcgtg attgtccgtc tccaagcact tgtacctcaa catgtttcgc
    25021 aacaggtata aatgcttcaa cataaacacg gtcatcattg aaatatttgt tgccttcgct
    25081 tttcgcctct ttaaatgcac gctcaagttg tgactcttct ttgacgatac gaatcccttt
    25141 tccaccgcca ccactcgctg ctttaatgac aagtggataa ccaatttcct cagcaagtgc
    25201 tttaatttca tcaacggatt cgactgacga tttagagcca ggtataatcg gcacacctgc
    25261 tttatcaacc gtttgacgtg cagtaatctt atcgcccatt cgctgcatcg tttttttcgt
    25321 tggtccgata aagtagagcc cttcattttc taccttttca gcaaacacag gactttcaga
    25381 taaaaagcca taaccggggt gaatggcgtt tgcttttgta atttcagcag cagctaatat
    25441 tttacgtata tttaagtaac tatctaaagg attcgcttga ccgatacaaa ctgcctgatc
    25501 tgctaattta acatgtagac tattttcatc acccacggca taaatagcga cagactccat
    25561 tttcagctct cttaacgcac gtataatacg aaccgcaatt tcacctctgt ttgcaactaa
    25621 tactcgaaac atgtaatccc cccctttact tcaatgttaa aataacttga ttaaattcaa
    25681 tattttcgcc atgaccaacc aacacttctt gaacttcacc tgattcatct gctgttactt
    25741 cattcatcac tttcatcgct tcaatgtagc cgataatatc ccctttattg actttatcgc
    25801 ctacttttac agcaggttta gttaattctt tttcatcttg taaataaaat gtcccaatca
    25861 tctgagaacg aatcacttta gtattatctt ctgcagattc atcagtttgc tgagtttgtt
    25921 ctacgtgttg gtttgaccgc tgcgtgcttt gtggtgggtc tacaggcgct tctgtttgtt
    25981 gaatggacga taaatccaat tctagctcca tctcgtcatc ccgatattta aaatgcttcg
    26041 cgccgtattg ttttaataaa tttaacgttt gctcaatttg ttttaaatcc atggtatact
    26101 atctcctttt agaacctttt taattttttg ttgtgtaggt ctaatgttgt gcagtaaacg
    26161 ttgaggccgt tgacgaattt gtgcttttgc ctcttctaac tttctatttt ttcgtgctaa
    26221 aatttcattc gcttcgttaa atgtcatcca ttcgaatttc accttatcac caggttgttt
    26281 ttggacaata tcgacaatat cagaatcaat cacagtgcca attttagtgt agccccctac
    26341 tgtctgccgg tcattaagta gaataatcgg atgaccatct ttaggcactt ggacacttcc
    26401 taatgcgact ggctcagaaa tgatgtcagc atctgtaaaa ggttgtatcg atggcccttt
    26461 aagtctgtag cccatacgat ctgaattttc tgaaatagtg aattcgagct gctcaagttc
    26521 tttaatcgta cgtcgtgtaa atgattctag ctgtggtcca tccattaatc caatcggcaa
    26581 ttgtcgcgct ttcgtaaaac ttgaaaaatc actcgaacga ccgatgagct gataatctaa
    26641 aaatgatggt tgtgtaggaa tgatgtcatt gactttcaat gcacgacctt tgaaaccacc
    26701 aattcctgtc cgtgtatgtg tcgcatagct accttcaaaa agtgggatat ctaatggttt
    26761 cgcaaatccg atataaccac gcatcccatg aatgacatgt cctatttcta aaacatcatt
    26821 tttttcgacc ttgataacag tttgatgtga gacaggttgc ccattcaacg tggctgaaaa
    26881 tggtgcacca gtcatcgcaa ataagttttg atcgagaaat ttgatcgttg ggccaatcat
    26941 cgtaatttct aatgcgggtt gtccctctgt ttctaataaa gtgtttaaaa tctcatagct
    27001 cgggcgatcc attacaccag caggagaata accttcaaac tgatgacctg aacgtccttt
    27061 gtcttgaact gtcgtaaaca atccaggttt aattatttta atggccatct tctatcatca
    27121 cccattcatc atagtctaat tgatttttac gcacatactt ttgaatatgt aaaaattgtt
    27181 cttcattaat ggaataaaat ttaattctgt caccaggttg atataaaatt ttaggctccc
    27241 gtttcggatt aaaaacatct atcggtgtac gccctataat ttgccaacct cctggtgaat
    27301 cggatggata taaacctgtt tgattattcg caatcccaac tgagcctgca tcgattttaa
    27361 ttcttggttc ttcttttctc ggcgtatgaa ggcgaggact caaaccacct aaaaatggaa
    27421 atccaggcat aaatccaatc atataaacaa gataatgatt ttctgtatga tattgtatca
    27481 cttcatccac cgttaaatgg ttatgatccg cgacaatctc aatatccggt ccccatttcc
    27541 caccatagag aactggaata ttcacgattc tcttttgaac cgtatttacc ctcgtttgtt
    27601 gcatgtccaa tgtatcaagt tgtagtgcct gaattaacgt ttcgaaatct gtttgaatgc
    27661 catcgaaata taccataatt gcacgataag aaggtacaat ttcatgtatg tgcggatggt
    27721 tcatcttttg aatatgttcc actacagcat tgacatgttc ataaaccgat tcactaattt
    27781 ctgctttgaa gtagattata aaagattgct cgctaatttg tcgaaaatac atgtacatcc
    27841 cccttttcgg aaagccctta caattatata tattatcatt atacagtatc agtgacaatt
    27901 aagtattgac gaatataaga gaatagcgct cggaattata atccttacaa cccagttaat
    27961 ttataagtat aaaaataagc tgggatacaa tgaagttttc ccagccgctt ttcttccgat
    28021 gcctcacatc aaatatttaa ttatataatg agatgatgct tgtacgcata tagatttggc
    28081 gcattgatta atgaatatct acaattttaa cattcatttc gccaccattt ggaagaggaa
    28141 cacgtacttc gtcatctact tgtttaccaa taagtgcttg tgccattgga gattcgtttg
    28201 aaatcttgcc attaaatgca tcagattcag ctgagcccac gatttgataa gactcttcgt
    28261 cgttacctgg aagctcaacg aatgttaccg ttttaccaat ttggacaaca tggttatcgc
    28321 cagtatcttc aatgattaaa gcatgacgta acattgtttc aatacgttga atatcctgct
    28381 cgataaaacc ttgttcatct ttcgctgcat cgtactctga gttctcagat aagtcaccaa
    28441 aactacgtgc aactttaatt ttttcaacca cttcagggcg tttgactgtt tttaattctt
    28501 ctaattcttt ttcaagtttt tcgtatcctt cttgcgtcat tggatattgt ttttggtttt
    28561 ccattgtctg catcttcctt taactatgat ttaatctttt ttacgtacaa gtgcttgaat
    28621 cttagttgtc atgatgtcaa tagcaacttt atttgaacca ccttcaggaa taataatatc
    28681 cgcaaatttt ttcgttggtt caataaattg gttatgcatt ggcctcacaa cagtaagata
    28741 ctgatcaatt acagattcca ttgtacgacc acgctcttta gtgtctctca caagacggcg
    28801 caaaattctt aaatctgcat cagtgtctac gtatatctta acatccatca tattgcgcaa
    28861 ttcttcattc tcgagcgcaa atataccttc tacgataata acatctttag gttgaaatgc
    28921 aatcgtttta tcactgcgtg tatgatttgt atagtcataa gtcggtactt ctacactttg
    28981 acctgactgt aatgatttaa gattttggat taacaaatca ttatcaaacg caaatggatg
    29041 atcataattt gttttaagac gttgttcaaa tgtcagatgt gattggtctt tgtaataata
    29101 gtcttgttca atgagtgcaa cactatgccc ttctaaatta ttcattattt tatttgtcac
    29161 agatgtttta cccgaaccag agcctccagc aataccaatg atcgttgttg ccattcttta
    29221 aacttccttt ctcatcatgt tgtttggata aataggctgg tcaactttga tttgcacgat
    29281 ttgtaatggg tgtcgtgccg catcaagttc atttccttct tcatcataaa tcttatcgac
    29341 gacttgttta aaggtttgaa tttcaggtcc gaaaaactct acttcttgac ctggtttaaa
    29401 gtgatttctt tgttgtattg tcgccatttg actgtcttta tcatagtcta atactaagcc
    29461 gataaagtca aatggtgctt ttttacttga ttcatttcca aacatttgtt cttcataacc
    29521 tggtgtccct ttgaaaaatg cgggtgcggt atcgcggttc gcacatttat ctaattcaaa
    29581 gagccattcc ggtttaattt tgaaattttc tgggtctgca gcatacgcat caatcacttt
    29641 acgataaact gaaacgactg ttgcaatata gtgaatagat ttcattcggc cttcgatttt
    29701 aagtgagtca attcctaaat ccatcatgtt cggaattgat tcaattaatt ttaaatcacg
    29761 tggactcatt gcaaatggca cggcattacc atcttcataa tagacatcta gttcgccgtc
    29821 attatcaact gttaataaat cataatccca acgacaactt tggcaacaac ccccacggtt
    29881 agaatcacgt gctgtcatat ggttactcaa tgtacaacgg cctgaatacg caatacacat
    29941 agcaccgtga atgaaagctt caatttcgat atccacttta tctttaattt cttgcatttc
    30001 catcgcacct gtttcacggg caagtacgac acggtctaag ccttcttctt tccaatattc
    30061 tacggcttta tagttactta atgattgctg tgtagataaa tggatttcta acttcggtgc
    30121 aacacgttta cacgtttcaa taattaatgg gtctgctacg ataatacctg ttgcacctgt
    30181 tgcttctaat tgctctaaat agtcatctag accctccata ttttcatcat gtgcaataat
    30241 atttgtcgtt acataaattt tagcaccgta acgatttgca aattcaacac cttcacgaat
    30301 ttcgtccata gtaaagttgt ccgcatttga acgcaaccca tactcttgac cgccgatgaa
    30361 tacagcatct gcaccataat gaacggcgat ttttaacttt tctaaattac cagcaggcgc
    30421 aagtaactca ggctttttca ttttcgcttg cgttgctggt ttaacttctt caagtacctt
    30481 catccatgct ctctcctatc tttagtatac tgtttgcttg taatagaatc cttcatcaaa
    30541 cggtcgatgc tctggttgta ttgcttcaat tgggtctaca agcataaatt tttcatcttc
    30601 atacgtatct ggatcttctt catataaatc tatcgcttca cgatattgct cagtcgctac
    30661 attgatatat tcttctgttt ggagtacccc atcaattttc aagctatcga ttcccgcttc
    30721 aaatagtggt tctaactcct caattaaaca aatatcgttc ggcgacataa tatgcgtacc
    30781 attataatct tcaaaaacag ggtatttatt atcacgctct tcatcgtaaa gtaataattg
    30841 actgtccgtt gctgcttcat tacgttgaat tttcatttga cgatcttgga atgtatagta
    30901 gtttcctaat agcatacgtt tcgattggaa catacacgtc ataccatgga cctgcacttc
    30961 aatctcaaca tcactatttt ctttgatgtt caaaatttct tctaaactta actcccgcgc
    31021 aagcaccgct cttttcgcac cacgtcttcc ccaataatta cattggaagt ggttcgtaac
    31081 gagtgtttct gcattccagt ttaaaggtat agggttttct tgttgcttta caatcatcac
    31141 tactgcagga tcaccaaaaa taatacgatc tactctaatt tcatgcaaaa acgcgatata
    31201 atcttcaagc gctggaatat gatagttatg gaaaatacca tttactgcag cgtatgcttt
    31261 tttaccagca tgatgaatga tttcaaccgc ttttttcatc tcttctcgat tgaattcccc
    31321 ggctaatctt aagccaaact tttcttcacc gataacaaat gcatctgctc ccttttcaat
    31381 taaggtttcg atgtgactta aagacttcgg tgtcactaat aactcagtca tgtttactct
    31441 cctttattga tatcgctagc ccatcatcca tatgaataaa attcgttgta aaaccttgtt
    31501 gttgacttaa ccattgattg tatcgttgta ccttttttac catttgtttg acattgcgac
    31561 ttcttactac atcgatgtcc gcaacgaaac catggtataa aatattatct gttatcataa
    31621 cacctttttc gcgtaacaaa ggacaataaa gctcaaaaaa gcgttgtgat tgtgccttag
    31681 cagcatcgat aaaaatcata tcataaatac ggtcattcac gagttcaaat gcttctgtcg
    31741 catctgcttc aattaaacga atttgatccg cataaccata ttgacgaata tttgttttcg
    31801 cttgttgaat catttcttca ttgcgttcaa tggtcgtcac gttaatcgat ttatccactg
    31861 aagcgaattg catcgcactg taaccaattg cactaccgac ctctaaaatt tctttcggct
    31921 gatgtagacg aatgatttgt tgaatgagat ctaaagaaag ctgatcgaca ataggcactt
    31981 gatgtgtctc ggcgtagtta cgcaattggt cgatatcatt gtcatattgt tttaagctta
    32041 aaagatatga ttgattttta tcttccatgt attcttgact tcctttttat attctaaaaa
    32101 tcatcaaaaa ataaaccagc caagttggac tgatttaact ttgatgtctg tatatgcatc
    32161 acggaaataa tgttcgttta tccgttcttt catagcattt taaaatgact tctatacatt
    32221 ttatcacata atcgcttgac tgataagctc caatcatcat tttagtgaaa gatttcatgg
    32281 aattcaatac cccttattta taatagttta gtaataaagg tgacgaaacg aacttatatt
    32341 acagatttgt tatcatgcat cacaaattaa actgtgattt ttatcctaaa gagaacaatc
    32401 gtttaaaaca actaaaaaga gcaggcacat ctttcaatgc ctactcttta attcgcatca
    32461 gcaattaatg ctcatgatca tcatccaatt tcgtattgac aacttcttca atcatatccc
    32521 attcttcatc tgtctcaaca ggtaaaaagc gtccgccttc tcctgattcg tctggctcgt
    32581 taatcatagg aatcaattca attaaatcat cgtcatctgc ttgtgcgcct tcttctgcaa
    32641 ggattacata ctctttttca aaacctgggt gataaaactc taacatttta cgatataaga
    32701 cttcattacc ttcttcatca aacaaagtta ataaagtttc gtcattttta atttcaattt
    32761 cttgattatg gttttcgttt gtcatattcg ctctctcctt aattcaatcc atctaaatag
    32821 ccttgtaaaa tgaataccgc agccatttta tcaatcactt tttttctttt tgctctcgat
    32881 acgtcggctt ctaacaatga acgttctgca gccattgtac ttaaacgttc atcccacata
    32941 ataatttcta gatttggcat ccgctctgca agtgcatctt tatattttaa cgaagcttca
    33001 ccacgaaagc caatagaatt gttcatgttt ttcggtaatc caatgacaac cgtacccaca
    33061 ttttcctttt gtatgatgtc aattaaggca tcgatgccga gctcattttc ttcttcgtta
    33121 atttggagtg tatctaaacc ttgtgctgtc caacccatca aatcactaat cgcaatacca
    33181 actgtacggc ttccaacatc taacccgata attttatgtt taagcatgct cgtccttact
    33241 atggttttgt aagtagtatg acactaactc ttccataata tcatctcgat cgatatgtct
    33301 aatttggttg cgtgcttcgt tatgacgagg aatgtacgcg ggatcacctg aaagtaaata
    33361 acctacaatc tgattgacag cattatatcc gcgctcttct agggtattgt agacattgtt
    33421 taaaactgtt tcgacattgt cttttggaag ttcatcatag ttgaatttca ttgttttatc
    33481 aaaattagcc atagtctaac actccttaaa ccataatgag attactcttt tattttacat
    33541 gaattcaaca ctcattataa cgatttaata taatttttaa taaattgtaa tgcttctgtt
    33601 atcttgccag gttcagtgcc gccaccttgc gccatatcag gacggccgcc acctttccca
    33661 ccaacgactg gtgccatatt tttaataatg tctccagctt tcacacgatc cgtcaaagct
    33721 tttggtacac ttgcaattaa tgaaacttta ccaccgacat cacttgctaa aacgataata
    33781 ttatcttgta attttgattt aaagtcatcc atcattgtac gcatcgcttt tgcattgtca
    33841 acctcaactt cagtaatgag tacagacatg tcgttaatcg tttcgacttg atctttaata
    33901 ttgcccattt tcaattcatt taaggctttg tttttatctt caatcgtttg ctttaatgtt
    33961 ttttcattat attgcagctg ttcaactttt tcaatgactt gtgcatccga ttttgctttc
    34021 acttgttgct taagcgcatt gaattgatct aagtagtgtt ctaaataaag gaatgcattt
    34081 tgtccagtca ccgcttcgat acgacggaca cccgcacctg tacctgattc acttgtgatt
    34141 ttaaataagc caatttctga tgtgttgcgc acatgtgtcc caccacaaag ctcgattgaa
    34201 aatggttgca tatttacaac acgtacgatg tcgccatatt tttcaccaaa taacgccatt
    34261 gcacctttag ctttcgcatc ctcaatgttc atttcttgaa tttcaaccgg aatgctgttc
    34321 caaatttctt cgttgaccat ttgttccact tgtttcattt ctttggctgt cattggtgcg
    34381 atatgcgaga agtcaaaacg gagacggtca ctatcgacta atgaaccagc ttgattgaca
    34441 tgctcaccta aaactttttt caatgccgcg tgtaataagt gagtggcact atggtttttc
    34501 ataattgccg ttcttgcttg acgatcgatc gttgctgtga cttcggctgc ttcacggact
    34561 tcaccaaatt gaacgacacc tgtgtgtaaa tgttggccat ttggcgcttt aatgacttct
    34621 gtcacttgaa tttcaaattg cgcattgctc actgttcctt tgtcggccac ttgaccgccg
    34681 cttactgcat agaatggtgt ttgatccaaa ataaaatgaa tcgtctcacc tgcatcagcc
    34741 atcgtcacgc gttcaccgtc acgtacgatg tctgtaattt tagcatgcgt ttcaaacgct
    34801 tcgtaaccta aaaacttgct cactgtgtta atctctttta atacttcgct ttgaacttgc
    34861 atcgattgac tgctttgtct cgctttacga gcgcgatcac gttgtgcttc catatgatcg
    34921 ttaaatgaat ccatatcaat cgctaatcct tcattaagcg taatttcttc agttaactca
    34981 attgggaaac catatgtgtc atataattta aatgcatctt ctcccgcaat ggtctcgttt
    35041 gaagatttag cttgtttgat taaatcattt aaaatcgcta gaccttcctc tagcgtttca
    35101 tggaagcgtt cttcttcaga tttaatgaca cgtgcaataa aatctccttt ttcttttacg
    35161 tttggatagt aaggttccat tatgtctgcc acaatttcta ccaattgata cataaatggt
    35221 tcgttgattt ctaacgtttg gctaaatctg accgcacgac gtagtaaacg acgtaaaacg
    35281 tagcctcggc cctcattcgc aggcaatgca ccatcagaaa tagcaaaagc aatcgtacga
    35341 atatgatcag caatgacttt aaatgcgaca tcgttatctt tatcgactaa atattttttg
    35401 cctgaaatag cttcaacttg accgataatc ggcatgaata agtctgtttc atagtttgta
    35461 cgtacgtctt gggaaataga agtcatgcgt tctaatccca tgcccgtatc aatattttta
    35521 cttggtaatg gcgtatacgt atgatcttta ttatgattaa actcactaaa tacaaggttc
    35581 catacttcta aataacgttc gttttcgcca cctggataca tttcttcagc ggaatcatct
    35641 tgtccatacg cttcaccacg gtcatagaaa atttctgtat tgggtccaga tggtccttca
    35701 ccaatatccc aaaagttccc ttcaatacga atgatgcggt cttcagtcaa accaaccaca
    35761 tttgtccata aatcgtatgc ctcagtatct tcagggtgaa tcgttacata cagtttttca
    35821 ggttccatcg ccatccagcg ttcacttgtt aaaaattccc atgcaaattc aatcgcttca
    35881 cgtttaaagt aatcgccaat cgagaaatta cccaacattt caaagaacgt atggtgacgt
    35941 gcagtgaaac ctacattttc aatatcgttc gtacgaatcg atttttgtgc gttgacgata
    36001 cgtggttttt tcggaatttc acgaccatca aaataatttt ttaatgtcgc aacccctgag
    36061 ttaatccata gtaatgaatc atcatcaatc ggaactaatg gcgctgaagg ttcaaccata
    36121 tggcctttct cgacaaaaaa gtcaatatac atttgacgaa tatcacttgc ttttaatttt
    36181 ttcatcttta caactccttg attcaaatag atacaaaaaa acacccgtct ctcaaaaagg
    36241 gacgaatgtt tcgcggtacc accctagtta tggctatatt gccatcactc attatcatat
    36301 acgtgctcat acatagtagc gttcaatgaa tcacactcgt acattctcag caacttgtac
    36361 gtctctgtat agtggatact catttactcg gctatgcact tgaacttaac tttgattata
    36421 taaaaaaggt ttaaactttg tcaatttcta aaaagtcata aggtgtcact tcacccatat
    36481 taatcatcgg atggatttta aacatagtcg cttcagttaa aataaactca gccgaagccg
    36541 tatcagtatc tgttttatca tcagtatctt ccggagtaaa atattgcatt aagaacgttt
    36601 gtaattgtgt taatcgcgtt tgacccgcag tcgctaaccc gatattaaaa gcatctgcat
    36661 caccaagaaa aacgagcgat tgtttggcac gcgttaatcc agtatataaa atcggttttt
    36721 gtaacattct aaaatactgc ttaacaatcg gcatgatgac aattggaaac tctgaacctt
    36781 gcgctttatg aatcgaagta caatatgcat gtgtcaattc cgtcaaatca gagcgtaaat
    36841 aagtaatttc gttcccatca taatcaacga ccacgacatc tttatttaaa gcattttcct
    36901 ttgcccaaaa aataccgaca ataacaccaa tatcaccatt aaacacatta tcgtttggac
    36961 gattaatcag ttgcaatact ttgtcgcctt tacgaaatag aacatcacca aattcaatct
    37021 cacgttgcga ttcgtctgac aaagggttca aaatgccttg taaaatttga ttgagctttt
    37081 taatccctgc attaccacga tacatcggcg cgagcacttg aatatctgcc attgtatacc
    37141 ctttttgcac ggcattgttg acgacttttt ctacgacttg tggaatttga tcggtttgac
    37201 atggaataaa cgaacgatcg tgaaaacgtt gggtaatatc aactttttca ccgagtttca
    37261 tacgatgcgc taaatcaata atgctggagc cgtcctgttg gcgataaact tcagttaaat
    37321 tgatgcgcgg taatacattt gcatcaatga gatctttaaa aacttgtcca gggccaactg
    37381 atggaagctg gtcttcatca ccgactaata cgacttgggc atctatagga actgcatcca
    37441 taaattgatg gaatagccaa gtgtcgacca tagacatttc atcaataata atcaatttcg
    37501 catgaatttc attgtctaat ttgtcttgcg gcttcgtatc ttgattccaa ccaattaagc
    37561 ggtgaatcgt cattgcttct aaccctgtcg cttcatgtaa acgtttagac gctcttccgg
    37621 ttggtgcagc taatacgacc ggataatcat cttcatctga atagtcatcg taatctaatg
    37681 agatgccgtg aatttctgca tataactgga caattccttt aatgacagtt gttttccctg
    37741 tacctggtcc acccgtgaga agcatgactt tatgttgaat cgcatattct aaagcctctt
    37801 tttgagaagg ggcataatgt acttcattga cctcttcaat ttccccaata tgtaattgaa
    37861 tatctgaagc atcaaatgta gttaaatgct ctcgattggc aaatatttta tataaatttt
    37921 gtgtgctttt aatttccgaa taataaagac ttgggatggc caccatttcc tcttgattca
    37981 ctagtcgttt ttcttcaact aattcagcta aaatttgcgt catggtgtca tagtcgacac
    38041 ttgaatcttt gccctgagac agcagttgaa tcgtttcatt gattaacgct tcttgtggga
    38101 ggtacgtatg accttgttta atacacgtat cttcaactaa ataaagtaag ccggctttta
    38161 aacggtcggg gtgctctgga tgaataccga gctgttgtgc cagttggtcc gctttgttaa
    38221 aaccaacccc tttaatgtca taaacaagtt gatacggatt ttggtcgagt accgttaatg
    38281 tatcactttt ataaaacttg taaatgtcca tcgcaagctt tgaaccaaaa ccaagttcgt
    38341 tcaatcgaat catcacttgt tcactttctt ggttggcata aatctgctcg acaatttgtt
    38401 gttgtttcgc tttagacagt ttaggcactt gttcgatgac agattcatct ttcaaaatgt
    38461 catgaatcgc attttcacct aatttattga caatggattc tgctgttttt ttaccaatcc
    38521 ctttaaacaa ttcactagat aaatatgcaa taacagcatc tttggtatga ggaatttctt
    38581 tttgaaacgt ctcagctttt aattgctgac catatcttgc atgttgcacg atttggcctt
    38641 taaaagtgta cgactcatct tctaccatat tcggaaaata tccaaccact gttgccatat
    38701 catcaaagtc accatttgtt tcttctattt caactttaag cactgtgtaa tgattgtccg
    38761 tattctgaaa caaaatcatc tctacggtgc ctttaataaa tgtatggtca aacagtgttg
    38821 gattttccat ggttacgcct cctcttcggc ttttattaat cgaaatgttt tcagtgcgtg
    38881 ctgactgagt aaatgttgcg aatccatttg tactgcacgt tcaaagcctt gaatggccgc
    38941 atcgatattt tcattgagca tataaagcgc taatgttaag ttgtattgtg cgtctgcatg
    39001 ttgtggatcg cgttctaata tttgattcaa aaccggtatc gcttgatcaa acatttccag
    39061 ctcacacata agcaacgcaa attgaaattg gacttcaaga tcttcaaatt gagcatctaa
    39121 ctctgctgca cgcattatat aaggtagggc ttgcttctta gcgtcgagct ggatcaagga
    39181 cagccctaac atataatagg tatctatgtg atcgacatga tgcgacaagg cttcttgata
    39241 taatttgacc gcttcttgaa aacgaccttc attaaagtaa acattcgcca aattataata
    39301 aatcacacca ttatctggtt taatcgtcag tgcacgttga aaaaaacgtt cagctttttc
    39361 aatttcacct gcttctgcta ataacacacc tgaattgata taattttcga cttcatcagg
    39421 atgtgcttct atgttgttaa aactttcttg taatgcacgt tcgaattgtc cttgttgaat
    39481 gagttgatga atctgttcaa gttccatttg aatcaccttt tcctatacga cataatctag
    39541 ttgtccgtct tttttataga cgtcatcaat cgttgcaccg cctaaacata catcaccatc
    39601 gtaaaacacg acagcttggc caggtgtaat ggcgcgaact ggctcgtcaa aagtcacttt
    39661 aactgcatcg tcaccatgtg cagtcacagt gacaccgaca tctttttgac ggtatctaaa
    39721 tttagccgta catttcaacg gctctgttaa gtctgttgca ttcacaaatg atacatcaga
    39781 agcgattaaa tagtcactgt ataatgcatc gtgatggaaa ccttgttcaa cgtataaaat
    39841 gttgtcttct aagtttttac ctacaacaaa ccaaggatcc ccatcgccac caataccgag
    39901 accatgtctt tggccaatcg tataatacat aagcccgcca tgttgacctt ttaattcacc
    39961 attaagtgta cgcatttcac ctggttgcgc aggtaaatat tgtgataaaa atgttttaaa
    40021 attacgttca ccgatgaaac aaatccctgt tgaatctttt ttcttcgctg tggctaaatc
    40081 ttgttccaat gcgatttcac ggactttttg cttatcgata tcaccaatag gaaacatcac
    40141 tttactcaat tgtgcttcag tcaattgatt taagaaatac gtttgatctt tattattatc
    40201 gacgccacgt aacatttcta ctgaaccatc ttcatgatga cgtacacgtg cataatggcc
    40261 agtcgccaca taatccgcgc cgagttttaa cgcatggtct aaaaaggctt tgaatttgat
    40321 ttctttattg cacatgacat ctgggttcgg tgtacgccct tttttgtatt catctaaaaa
    40381 gtacgtaaac actttatccc aatactcttt ctcaaaattg actgcataat atggaatacc
    40441 gatttggtta catacagcaa tcacatcatt gtaatcttct gtcgctgtac atacgccaaa
    40501 ctcatccgta tcatcccagt ttttcataaa tataccgatc acatcgtagc cttgttcttt
    40561 caataagtgg gcagttacgg aactatctac accacctgac atgccaacta cgacacgtgt
    40621 gttttgattg gtcactattg ttcctcctta aattttaaat atattttctg tatttcaatg
    40681 acaatttctc taatatctgc ttcagtgact tgttcattta aactaatccg aatcgaatga
    40741 tccacacgtg atgattgttc accatacatc gctaacaaaa catgggaagg aatcgttgaa
    40801 ccagccgtac aagcggatcc tgatgacaca tatacgcctg ctaaatcgag taacgttaac
    40861 aatgtttcta catcaacaaa tgggaaatgc aaattaataa tatgatttgt cgtatcaatc
    40921 attgaaccat tgtattcaaa aggaatcgaa cgttgttgta aaccgacaat caattgttct
    40981 tttaatcgtg tcaaatgcac gttattatca tcgcgtgaag cttcagctaa agttaacgca
    41041 gtcgcaagtc ctacaatttg aggtacgttt tcagttccag cacgacgttt cgtttcttgt
    41101 tcgccaccta attgcggata tgtgatgcgt gtgcccgttt taacataaag aacgccgatg
    41161 cctttaggac caccgaattt gtgcgccgtc atacttaaag catcaacagc taaatcctcc
    41221 acatcgatag gcaaatgacc aactgcttga acggcatcca tatgaaagta aacgtcatgg
    41281 tctgctaata catcttgaat gtcatacaca tgctgaactg taccgacttc attatttacg
    41341 aacatgattg acacgagcgt cgtatcttca cgtatacttt gctttaactg ttctaaatca
    41401 atgattcctc cagcatcaac gtctaaatag gtcacttcaa atccttgttg ctcgaggtat
    41461 tcgaaaacgt gcagtacaga gtgatgttca atctttgtcg taatgagatg cttccctttt
    41521 gcctcatttg cataagcaat acctttaatg acagtgttgt tagactcggt tgccccactt
    41581 gtaaaaatta cttcattcgg tttcgcattc aaatattgtg cgaccgttct tcttgattca
    41641 tctagtaatc ttctcgcatc tcgcccttga gaatgtattg aagaaggatt accaaaatgt
    41701 gtttgataga cagccatcat tttttcagca acttcaggtt ttaccggggt tgttgccgca
    41761 taatctgcat aaacacccat cattacgtca gccctttctt ataatcaatg ttcctatttt
    41821 agcacttgct ttctaaaaat tctagtacag tgattacgtg ttttttacgg ttatagtcat
    41881 ttctattgta atctttacac cttcagaatt caatgtatgc caaaaagcag tttttgtgag
    41941 ttgatgatga aactaatgtt atactagcgc tataaaaagg agtgtattat gatgccaaaa
    42001 tcaatgaaat actcagcatt aaatcttgtt ccgattagag aaggaaataa cgaaaaagaa
    42061 gcaatctcac aaatggtagc actcgctcag catttagaac aaaatcaata cgagcgatta
    42121 tggattgcag aacatcacaa cgcaccaaac cttgtaagtt cagcaactgc attgcttatt
    42181 caacatgcat tacaccatac gaacgaaatg agaattggct ctggaggtat tatgttaccg
    42241 aatcatgccc cgcttgtcgt agctgaacaa tttggtacgt taaacacgtt atatggagat
    42301 cgtgtagacc taggattagg acgtgcacct gggacagaca tggcaaccgc aagtgcgctc
    42361 cgtcgtgatc aacatcaagg ggtgtatcaa tttcctgatg aagtgcaaca gttactgcaa
    42421 tattttggtc ctgatacgat acaaggctat gtcaaagcca ttcctgcagt tgacaaaaac
    42481 gtaccgattt atattctcgg ctcttcaacg gactctgcac atttagctgc tagaaaagga
    42541 ttaccttatg tttttgcagg tcatttcgca ccacagcaaa tgcaagaagc cattgcaatt
    42601 tataaagatc tctttgaacc atccgaatat ttacaagcgc cgtatattat cgtttgttta
    42661 aatgtcatta tggcagacac tgatgaagaa gcgcagtatt tggctacaac ccaatcgcaa
    42721 atctttgcaa gtatattaag aggtagaatg aataaaatgc agccacctac tgaagatttg
    42781 agtcaactgt tatcaccgag agaaatcgca atggctgaag cacgtttaca gcattcactg
    42841 attggcaata aagcatcagt caatcaacaa ttagacgcct ttttacaaaa acacgggtgg
    42901 attgatgaga ttatggccat cagttatatt tatgacaccg acttgcaaca tcgctcatat
    42961 cgctacttta aagcattgat tgacgaacgt aatcaaaagc aataaagcgt cacgatattc
    43021 acaggaatca tctattttag tacacgccat tgaagttgcc aacgtttcat gtttgatgag
    43081 aagcgttggc aagtttattt tgcctaataa acgaaatcat agagcgtcat accttatctc
    43141 agtgccgaat cagttgtgaa aaaagtacat ttcttgaact tcacatgttc aatcttgtta
    43201 ttcaataaac accccaaaat ataaaaaacg gctgcaggca catacctaca accgctatta
    43261 tcaatctgat tatttattac cgccagtaaa tttatccaaa gcatctttcg ctttatcaac
    43321 taaactaccg ccatctttaa tatctttggc gtcactttgt tgactatttt gatacttatc
    43381 ataagcgttt tttgctttgt ttaaatattc tttaccttgt ttttttatct attacactta
    43441 ttctttcatc atgattttta actaaaaatt atttcttaaa cttatcaatc atgtcttgtg
    43501 ctttgtcttt tacattttca acgacttctt tagctttacc agaagcttta tcttgcttac
    43561 cttcattttc taatgattgg ttatctgtta cattaccaac tgtttctttg aagtttcctt
    43621 tagcttgttc gaatttattc tcttgatttg ccatttataa tgcctcctta tgaatatttc
    43681 aatatactta ttccacattt tatataggcc taaacatctt attaaaattc ttcgtaaaca
    43741 gcaggatctt ggttcttgcg tcgaccatca gcacgagtca attggtcaat cgcttgtaaa
    43801 tcttcatctg tgatatgaaa gtcgaaaatg tcaaagttct caagttggcg ttttgatgat
    43861 gttgctttcg gtatcggcat gacaccattt tgaatatgcc atcttaaaat gacttgagcg
    43921 actgttttgt catatttaga tgaaagttgt tttaatgcag gttcttccat cacaccattg
    43981 tctcgaccta atgggctcca cgcttgtgtc aaaatgcctt tctcttcatg ataggcaatc
    44041 atctcttttt ggttaaaata aggatgtagc tcaatttggt taattgctgg taacacacct
    44101 gtttcttttt caagttgctc gatatgttca ggtaggaaat tacaaacacc gatatgtctg
    44161 actaatccag atttttgtgc tacgatcatt gctttccatg cttctacaaa tttaccttgt
    44221 ttcggattag gccaatgaat taagtataaa tcaagataat ctaaaccgag acgatataat
    44281 gattcttgaa tcgtttcata aacatgcgct tcactttggt aacgtccagg taattttgaa
    44341 gtgacccaaa tgtcgtctcg ctgcacgtga ctctgttgaa tcgctctacc aacagcacct
    44401 tcattttcat aattatatgc ggtgtctaat aaacgataac ccaaattcag ggcatccgtc
    44461 atcgcatgcg caccttttgt tccatttaat ttatacgtgc cgaagcctaa ttgatcgata
    44521 aattgtccat ctttcaaagt aaactgttcc ataataccct ccttaaattc tagcaaattg
    44581 cacctaatga gattaaatat aaaacatgta gccttctaaa gcatctttat cctgatagtc
    44641 tgcgagtgat tgtaatgtcg tttgatcaag tacctctctc accgcattgc gcatacgtaa
    44701 ccataattgt tgttgtccag gcggttcaga ttccatacgt tctacgatag tcaatgggcc
    44761 ttcaagtaag cggataatat cacccgcagt aatttcagtc gctgacatct ttaattcata
    44821 cccacctttt gcacctctca cacttctaat gagacctgca tttctaagtg ggcctacgag
    44881 ttgttctaaa tagagatcac ttaaaccatt ttcttctgcg atcgttttca atgacacaca
    44941 accagttccg tgtcgtttgg ctagagcgat cattaatgtt aaaccatatc ttcctttagt
    45001 ggatattttc atttttacct caccttacat catccgattt atttttattt tagcattttt
    45061 tatattaata taataccatt gtatataaga gtacaaaact aataacaatg gagggaaaac
    45121 gatgttgact gaaccactcg cttctagaat gcgtccacgg aatattgatg aagtcattgg
    45181 acaacaacat ctcgttggag aaacagggat tattcgtcgt atggtcaatg cgaaaaggtt
    45241 gtcatctatg atattttacg gtcctccagg catcggaaaa acaagtattg ctcaagcaat
    45301 tgcaggcagt actgctttca agtttagaca attgaacgct gtaacgaaca cgaaaaagga
    45361 tatgcaaatg attgtcgatg aagcgaaaat gtcaggacaa gtcattttat tactggatga
    45421 aattcataga ttagataaag cgaaacagga ttttttatta cctcatttag aaaacgggaa
    45481 gattgtcctt atcggtgcaa caacttccaa tccatatcat gcaattaacc cagcgattcg
    45541 ttcaagagct caaatttttg aattatttcc gctcgataaa gatgatatta aagtcgcttt
    45601 aaaccatgca ttggaagatg aagaaagagg cctaaagcaa ttcgatgctt ccattgacga
    45661 tgatgcgttt gaatattttg caacacaaag ccaaggtgac gtgcggagtg ctttgaatgc
    45721 tttggagtta gctgtattaa gtgcaaacaa tcaacccccg cacatcacat tacaagacgc
    45781 ggaagattgt ttacagcgtg gggcgttttt aagtgataaa gatggggata tgcattatga
    45841 cgtgatgagt gcctttcaaa agtctattcg tgggagcgat gtcgatgcgg cacttcacta
    45901 tttaggacgt ctcatacaag caggagacct tcctacaatt gcgagaaggc tgcttgtgat
    45961 cagttatgaa gatatcggtt tagcttctcc aggtgccggt caacggacat tagctgcaat
    46021 cgaatccgct gaaaggttag ggtttccaga agcacgtatc ccgcttagcc aagcagttat
    46081 tgaactatgt ttatcaccaa aatctaattc agcaattcgt tctattgatg ccgcgttaag
    46141 tgatattcgt aaagggcata tcggtcaagt gccggattat ttaaaagatg gccattacca
    46201 aggcgctaag gcattagggc gtgcagtcgg ctatcaatat ccacacaacc atccaaacgg
    46261 cttcgttgca caacaatatt tgccagaatt attaaaaaac aggcagtatt acacgcctaa
    46321 agagacgtcg aagtcagagc aacagtttaa acaaatatac gacaatattc gacagcagca
    46381 aaacgaattg taaaagtgaa tttcaatatt aacaggagct ctgacgtaat gatatctgag
    46441 ctcctgttaa tatttccaat ttatttatct ttaatacgtt gtacgttgat gtctttcaaa
    46501 atgttattac atacataact tgcacaaatt aaaccgacga cacttggcac ataagcattg
    46561 gatgatggcg gcatttgtgc tttacggttt ttaccttgcg catccccaac taccgctttc
    46621 acatcctcac gaatcacaat tgggctttca cctgaaaata caactggaac ccccttttta
    46681 atcccttttt gctttaattt atttcgaatg atacgcgcga taggatccgt atgtgttttt
    46741 gaaatgtcag caatttcaaa ttgtgttgga tctgttttgt tcgctgcacc catactagaa
    46801 atgatttgaa tgtcccgcgc taaacattgt tccattaagt gcactttata aataatagta
    46861 tcactcgcat caacaacata atcgatatca taatcttcaa aaagttgttc gtacgtttct
    46921 tccgtgtaaa acatatgtaa tggggtcact ttacaatcag ggttaattaa gcgaatacgt
    46981 tcttccatca aactcacttt actttgtcct actgttgtcg ttaacgcatg caattgacgg
    47041 tttacatttg taatatctac atcatcttta tctattaaaa taatatgccc gatgttcgta
    47101 cgcgctaaag cttctgcagc aaaagaacct accccaccga cacctaatac agcgactgtt
    47161 gtttgtttta atttgttgag cccttcttgt ccgattgcca gttcgttacg agaaaattga
    47221 tgtttcatat taaactcctt taattacaaa ttcacatacc attttaaata agcacataaa
    47281 aaatacgcaa gacacgaagc cttgcgtacc gatagatccg ttatgccgta gttgtaaagt
    47341 gcttgatcat tttggcctgc tatatacagg tgggtgccct gtttcttgtt ttgcacgtcc
    47401 tcctaaagag gcgtgtgcgc tgcaagaaaa cccattgggc tccctgatca aagagtgtta
    47461 ggtcaaaata cataaagcga gcttacgaac actacagatg actatcttat gaattaatca
    47521 tatcacaatt taatgattat tcaagaaaaa agtttgcaca ctgtgtattt aaattaatgt
    47581 ttgatacgta atgataattc gtctaattgt ctttctgata ccggactcgg tgcatctgtc
    47641 attaaatctg tcgcagatgc tgttttaggg aacgcaatcg tatcacgtag gtttgtacgg
    47701 ccacttaaaa tcatgacgaa acggtctaaa cctagagcga taccgccatg tggaggcgca
    47761 ccatatttaa acgcatctaa taagaaaccg aattgttctt gcgctgcttc atcagagaat
    47821 cctaatgctt taaacatacg ttgttgaagt tcaccatcat gaatacgaat cgatccacca
    47881 cctaattcga aaccatttaa tacaaggtca taagcttggg cttgcgcttg ttcaggtgct
    47941 gtttctaata aatcaatatc ttctacttta ggtgatgtga atggatggtg tgctgcaacg
    48001 taacgacgtg cttcttcatc gtattcaagt aatggccaat ctgtcaccca taagaaatta
    48061 tattgttctg ggtcaatgag tccacgttct tttccaagtt tattacgcaa tgcacctaaa
    48121 ctttgggcaa cgacatcttt agaatcagca acaaataaga ctaagtctcc tgctttagcg
    48181 cctgttaatg cttgtaattt cgtaacatga gcgtcttcaa agaaacgagc gattggaccg
    48241 tttaaaccat cttctactac tttcacccat gctaaacctt tggcaccata aatatttaca
    48301 aattctgtta aaccgtcaat atctttacgt gtatagtcag ctgcagcatt ttcaacaacg
    48361 agcgctttca cttgaccacc actttccact gcacctttga atactttgaa gtccataatt
    48421 tgacctaatt ctgagacgtc taacaactcc ataccaaaac gtgtatcagg tttatctgta
    48481 ccatagcgtg acattgcttc agtatacgtc atgcgtggga aggcatcagt catctcaatg
    48541 ccttttacat ccgctagcac gtttttcacc atcgcctcac ctaattgcat cacgtcttct
    48601 tgctcaacaa agctcatctc aatatcgatt tgcgtaaatt caggttggcg gtcagcacgt
    48661 aagtcttcat cacggaaaca tttgacgatt tggtaatatt tatcaaaacc actgatcatt
    48721 aacagttgtt taaacaattg tggtgattgt ggtaacgcat aaaattcacc gtcatgtaca
    48781 cgtgaaggca cgagatagtc acgcgcaccc tctggcgtag attttgttaa tacaggcgtt
    48841 tcaacatcat agaaaccatc gccgtctaaa aattgacgga ttgaacgtgt gatttggtga
    48901 cgcatcttaa aagtttgcgc taatttttca cgacgtaaat cgaggtaacg atattttaaa
    48961 cggatatttt catcaacatt taaattttct tcattaattg aaaacggtgg tgtttcagat
    49021 tgattaatta tttcaataga tttcgcttga acttccactt gtcctgtttt aattttagga
    49081 ttaattgttt catcgtctct ttttgtaaca gtccctgtaa tttcaacaac atattcagag
    49141 cggattcgtt cagcgacttc aagcgcttct tttgaaaagg ctgggttgaa tacgacttgt
    49201 acataacctt ctctatctct tacgtctaca aagataaggc cacctaaatc acgacgatta
    49261 tgcacccacc ctttcaacgt aacttcttgt tctaataatt cttctgtcac tgaaccacag
    49321 tatgtcgtgc gctttgccat tattctttac ctccatgaat ataactttct atttcttcaa
    49381 atttcatcgt ttgtgattca cctgtcgcca tatgtttcac agcgacttcc ccggcttcaa
    49441 gttcttgatc tccaatcaca atcgtatacg ttgcattcaa tcgatctgct tgtttcattt
    49501 gaccttttaa cttgcgagat aaataatctt tatctactga aatgccagcg tgtctgaggc
    49561 gattaagaag tgttactgcg aaatcatctg ctttttctcc catcgttgct acaaacaaat
    49621 caatgtgctg catttgtggg aattcaatcc cttcttcttc tagtgctaat aataatcttt
    49681 caatacttaa cgcaaaaccg atacccgttt cgcttggtcc atctaacaat tcaagcaagc
    49741 cattgtaacg gccaccacca cataaagtcg taatcgcacc atcataggct tcattatcca
    49801 tcatcaattc aaatgcagtg tgcgtgtagt aatccaaacc tcttactaat ttgggatcca
    49861 cttcataagg cacacctaga cgatctaagt gtgatttgac cgcttcgaaa taatctttgg
    49921 agtaatcatt taaaaagtca gtaattgacg gagctgtttg aatttcaggc tgatgacgat
    49981 ccactttaca atctaaaata cgcataggat tcgttttgat acgttgttga cagtccttac
    50041 aataattgtg aatcactggt tggaaatgtt cacgtaatgc attttgataa tccacgcgtg
    50101 actctgcatc ccctacacta ttgatcacta attttaattt tttcaaaccg aatgattgat
    50161 aaatgtgcat gaccatagct agcacttctg catccatact tgggttttca gcaccaatcg
    50221 cttctacgcc aaattgatta aattgacggt aacgcccctt ttgttttctt tcatagcgaa
    50281 acattggacc attataatac aatttcaccg gctggttcgg taagccttgc attttatttt
    50341 caatatagct acgtacgacc gcagctgttc cctcaggacg taacgtaata ctacgatcac
    50401 ctttatcttt gaacgtgtac atttcctttt gtacaacatc ggtagagtcc cccacaccgc
    50461 gcgcaaataa atcggtactt tcaaaaatag gcgttctgat ttcttgataa ttataaactt
    50521 ccatcaattt gtgcaattgg ttttcgatat agcgccactt tgtcgtttct tcaggtaaaa
    50581 tatcttgtgt cccacgtgga atgtgaatca tctttatcgc tccttttcat ctctattctt
    50641 aacttcagcc atttgtgcga ataaaaaaat gccccctgta tgcactaaac atacaaggga
    50701 cgtactttat tatgccgtgt tgccacccta attaagaaca atcaaataga gactgttctt
    50761 cactctaggc tcttaacgcg agcgacacga ccttactttc ataaagtacc tttccttgtg
    50821 ttcatctcac taagcacgac ggtctatctt tcagccattg gatagactct cttctgacat
    50881 cgttggttgc ttagttcatt caagaataca aacggtgtta aatataaaat tcattgttaa
    50941 tcatacctgt tttttcaatt agtttcaaga cattaactta aaaaataact ttctaacccg
    51001 tcgacaatcg cttgttcaac gatttgacga tgatttttgt ctttcatcat cacggtgtca
    51061 gtcgggttac taatataacc cagttcaagt aacactgcag gcatttctgt ttgtcgtaac
    51121 acttgataat tttcttgtct cgtgcctcta ttcgataaca ttgctttctt ttgtatgctt
    51181 gcatttaatg tttgcgcgag accttcttgt tgatcatgaa accaatagac agtcgcacca
    51241 ttggcattcg gtgtttctag agcatcatta tgaatactaa taaaaacatc acctttaaga
    51301 ttacggtctt ttaatttaac atattcatcc gttgaacgcg tcattttcac ttttgcgccc
    51361 ttcttttcaa gcaacgattt cagttctaac cctgttttca atgtgatatc tttttctaaa
    51421 gttttgtcac cttgtcgact cgaagcacct tgatcgctac ccccatgacc tggatcaagg
    51481 acaatcgttt tatctctcaa tggattcgca tgtggattga catctgcggg tatgtcgaga
    51541 ttcgtatgcc atcccgcaat ccatcccttt tgcttgccat tagctgaacg gacttcaatc
    51601 catttacctt gcttaccaat ttgaagaaat tcatcgcctt tatgcacttg atacagtact
    51661 ggatacgctg cgtttggacc tgttcgtatt tccgcgtcct cgattaaatt gatatgatca
    51721 tcatcactat gcctcaacac aaaatatgac acgacaagaa tgcccactaa tgcaatcgtg
    51781 aagcacgcgc cataaaaacg ttgcggatgg atgcgttttt gttttaacca ctgatcaacc
    51841 tttttcatac gactttgcca tctacactct cataaataat cgttacagga ccatcatttt
    51901 gtatactgac aagcatatct gttccaaatt cacctgtctc aactggaatt tgaaatgcac
    51961 gtagctggtc attaaaatac tcatacagtt catttgcttg atcaggtgcc atcgcttgtg
    52021 taaaacctgg gcgatttcct tttctcacat ccgcatacaa tgtaaattgc gaaatagata
    52081 aaatctcgcc attgatttgt tgaatattta aattaagttt ttcgttctca tcttcaaaaa
    52141 ttcgagagtt cgcaattttt ttcgctaaaa ctttcgcatc tgcttgagtg tccccttcac
    52201 caataccgac gagtagacaa aatccttgtt gtattgtgcg ctctatttga tgatttttca
    52261 cacttgcaga ttgaactctt tgtacaacga ttttcatcct tatgcactcc taattccaaa
    52321 ctcgcgtcac tgtgtaaata tccccgagtt gtttaatttt atctgcaact ttataaactt
    52381 catgtacatt ttttaccata atacttaaat taataacagc atttctatcg acgtccgatt
    52441 ttcctgcgac ttttatcaat tgacttgaag tactgttcac tgcttgaagt acctcattga
    52501 gtaagccatt gcgatcatat gcagtcactt ctaaatcaac ttgatatttt tgtgaagcat
    52561 ctttagattt cacccattct acatcgatta aacgttcatt ttcgttttta atattcgggc
    52621 aatctgtacg atgaacttta atgccatgac ctttcgtaat atagccgaca attcggtcac
    52681 caggaatcgg attacagcat tttgataatt taataagcac attatctagt ccttctacat
    52741 agacgcctga atctgtcgta atcgaatctt taatcggtgc agcttttgtc acttcttgcg
    52801 cttgattcaa tgctttttgt ttatgttcaa tgcgtaagcg ctcagacagt ttatttacaa
    52861 tttgtagtgc tgtcacacca ccaaatccaa ctgaagcata taaatcgtct tcattagcga
    52921 aattgtattt atcattcaca atcttaatat ttttttcagt taataactct tctggtctaa
    52981 atccttgttc tttcaattct gcttcgacca taaacttccc tttttcaata ttggacgagc
    53041 ggtcttgctt tttgaagaaa ctttttatct tacttttcgc acttgaagaa cggacaattt
    53101 ttaaccaatc tcgacttggg ccatacgaat gtttactcgt acgaatttca acaatgtccc
    53161 cagtttggag tacataatca atcggtacaa tttttccgtt aactttggca ccaatcattt
    53221 tatttcccac ttcactatga atggcatacg caaaatcaat aggtactgca ccataaggta
    53281 actcgatgac atcacttgcc ggcgtaaaag catacacttt atcactttgt aaatcgaact
    53341 tcatcgactc gataaattct tgggcatctg aggacgtatg atccgtttct gcaatatctt
    53401 ttaaccagtt taacttttta ttatagtttt cgttgtcttt atcaacttgc ttgccttctt
    53461 tataagccca gtgtgctgca acaccatgtt ctgcaatttc gtgcatctca aaagtacgaa
    53521 tttgaatttc aaggggatct ccattagggc ctactacagt cgtatgcaga gattgataca
    53581 tattttgctt tggcatcgca atataatctt taaaacgccc tggcatcggt ttccatagag
    53641 tatgtaccag gcctaaaaca gcataacaat ctttaatcga atggacgatg acgcggacag
    53701 caagtaaatc aaaaatttga tcgaattgct ttttttgctt catcattttg cgataaatac
    53761 tataaatatg tttcggacgg ccattaatat caccagcaat atccataata tccatttctt
    53821 tgcggatatt ttcaatcgca ttttcaatat acgcctcacg ctcactccgc tttttcttca
    53881 tgagattaac gattctgaaa tactgcacat tgtcaatata tcttaaagca atgtcttcaa
    53941 gttcccattt aattgtatta atccctaaac gatgtgctaa tggcgcataa atctctaatg
    54001 tctctttaga aatgcgaatt tgtttctcac gtggcatcgc acgcaatgtt cgcatattat
    54061 gtaaacggtc tgccaatttc actaaaatga cacgcacgtc tttagcgata gcaataaata
    54121 attttctatg attttcagct tgttgctctt ctttagaacg gtacttcacc tttttcaatt
    54181 tggttacgcc atctacaatc gttgcaattt ctacattaaa catttccgcg acatcatcaa
    54241 aagtatatgg cgtgtcttca atcacatcat gtaaaaaacc agcaacaatc gtaggcccat
    54301 caagatgcat ttctgttagg atacctgcga cttggatggg gtgcataata tatggtaaac
    54361 cgtttttacg aaattgtcct tcgtgtgcct tataagcgat atgataactt ttaagcacgt
    54421 attcatactg ctctttatct aaatattgtt tcgctttatg taaaacttca tcaacactat
    54481 atggatattc gttattcata tggtcacccc cacgttatca ataataatac tatcatacta
    54541 catgatttga aataattgaa ccgaatcata acgcattatt cagacaaagt ccgtaattta
    54601 caaaatatct ttcattttcc gtacagaaag acatcaaaat atatcatttg tagctaaaga
    54661 atcctatttt gtcccaaggg tctgcgaacg ataaaaggaa aaatgatacc aaagttcgat
    54721 atgagaagtg ataaagaaca acacaatatc attcaagtca agatactcgt atatacctca
    54781 caaacttatc cttttcttga taaataaaaa caactccaca catcacagca tgaagttgtt
    54841 tgaacatatt aacgattatt cgtcatattt aattaagcac attacatcat aatctttaat
    54901 tttctccata ccatttaaat acgtaagctc aataataaat gcaatacccg caacgatacc
    54961 accttgtttt tcaacgagat tgatcgccgc ttcgattgtg ccacctgtcg ctaataaatc
    55021 atctgtaatt aagacacgtt gaccaggttt aatcgcatct gcatgcatcg ttaatacatt
    55081 actaccgtac tctaaatcat attcatagcg aatgacttca cgtggtaatt tcccttcttt
    55141 acgtacaggt gcgaatccaa tccccatcgc ataggccact ggacaaccga taataaaacc
    55201 acgagcttct ggtccaacga cgatatccac atttttttct ttcgcaaact taacgatttg
    55261 atctgtggca tatccgtatg cttcaccgtt atccataatt gtcgtaatat ctttaaaatt
    55321 aacccctgct tttggccaat cttttacttc tgatacatat tgttttaagt ccattaaaat
    55381 cctcctcatt cattccgtgc caattcattt tctatccaag acttaatggc gccaaattct
    55441 tcataaagta actgcttctc tacctcaatc cgctgtacac gcgcttgata aacacggcta
    55501 gaggtgatgg gttgtttatc tgttgaatgc acaatctcga ttataccatt tttttgagaa
    55561 atgattccaa gatcaaggaa aacttttaaa ataaatttga gcatcatcgg tttaacgtta
    55621 ataaattgac ttaaagccac cccgtctttt tgtaaatcgg tttgtccttt ttgatacaat
    55681 gctttataac aatttttaaa atctgcaggc tgtggtaatc cttcaaaata aatcgaacgg
    55741 tcatgttgaa acactaaata cacttgagat gtatttaaat aatgacaaga taacttaata
    55801 tcctccatcg ttaaaggtaa gtcacgcatc acacatttgt catactgctg tggtatgttt
    55861 tcaccgtagt aatattcatg cgctgatgtt ttgtcttgat tcggatggat taaataacaa
    55921 acatgttgat catcctcaaa tactggcaaa cgtttatttt tactacgata atctaaaatt
    55981 tgacgttcat tacttttcat atctgttaaa accatttgtg ccgtacgatt gccattccat
    56041 tcattaatct gaagttcgcc tgtgacatca acatgttggt taggcattaa ctcacttgat
    56101 aacgcacctt gattccaaaa taatgcttgt aagttttgtt cgacaaaggt catctttaag
    56161 tgcgcttgtt gttgtccaat acctttactt tgtaacacag tcagaccgtt aacttgaata
    56221 atcggtcgtt taaaatctgt cccaaacggt cgtaaacgct caatggattg aatttgttcc
    56281 actgtaatgt gaccaacatc tatagtgacg tccacttttt gaatcggttg taacgcggtc
    56341 gtatcaatgt gcgtgcgcat ccaatcgttt aatccttcac gcaatgcaga aacttggtcg
    56401 ataggtaaag ttaaacctgc cgccatatgg tgtccaccaa attttgaaat taatgtttgt
    56461 tgtgatgata atgcttcaaa cattgacact tgcgtaatac tacgagaaga accttttgca
    56521 tgttgttgtt cgtggtcaat atttaatacc attgttggta aatggaaggt ttccacaatt
    56581 cttgaggcaa caattcccag gacgccttca tgccagtctt cttttgcgag aactaaaaag
    56641 tgttcgcctg cttggattgc atcttcagcc atgaccatag cttcatcaac aatcgtttgt
    56701 acaatatctt tccgttcaac attgaaatgt tcgacttgct cagctaaaaa gagtgcttct
    56761 tctgcatcat ctgtcatgag caattctgcc gcaagtgccg catcgtctaa ccgtcctaca
    56821 gcatttaacc tcggtccaat gataaagccg atcgtttctt cagtcactgt atcattaaat
    56881 tgcgcttgat tgaggatagc cgcaattgaa acgggtggac tttcattcaa taattgcaaa
    56941 ccatgttgaa caataaagcg attttcatct gttaaagaaa caagatccgc aatggtacct
    57001 atcatggcat aaacccaaaa tatattcgga acatccccga gcaaactttg agctaatttc
    57061 aatgctacac cggcaccaca caagctaata aatggatagt cataatctgg atgcatcggg
    57121 tgaacaatcg catacgccgc tggtaatgta tcacctattt catggtgatc agttacaatg
    57181 acatccacac ctaaattttg aaccatttca atttctgtat gaccttgtat gccattatct
    57241 accgtaatga tgagagaaac cccttcatca tacgcatttt tgaacgcagg ctcactcggg
    57301 ccgtagcctt cagtaaaacg gttaggaata taccaaccaa caattgctcc aagttgctgg
    57361 agtgtcttga ccataatcgt tgtagacgtc acaccatctg cgtcataatc cccgtacact
    57421 aaaatttttt cttgattttg aatcgctgta tgtatacgtt tgacggcttt atccatgtca
    57481 ctcatcaaac ttggattatg catattgtct ttagaagctg atagtacttg tgcgagttgt
    57541 gttgcctcag tatagccttt actttctaaa atatagcgca tcaaaggggt taatttatat
    57601 tgttcaacca atacgtcgtc catcgattga cgatttgtat cggtttgcca ttgaaattta
    57661 gattttatca tatcattcac cgccactttc tccacacagt attatatcga aaattcatca
    57721 gaataaaaag aacgagaggc taagacatct gatcagtctt aacccctctt tgtaaaatgt
    57781 gtgaaatcta tactaatact ttttcttcat tcgtacgttt acgtttatac acgacaagtt
    57841 tatgatgagg tgatttacgt aattcgcgtt tcttcaacat gccccatagt ggtacggcaa
    57901 taatgattga agaatataca ccagacaata gtccgattaa tagcgcgagt gagaagttga
    57961 aaatacttga cgcacctaac acgagtaagg cgataaccac gatgactact gtcaacactg
    58021 tattaatgga acgcgtcaat gtttggcgaa tagaactatt aacaatgtag tcaatttggt
    58081 cctctttcgt aatgactttt attttcgata acatctcacg tacacggtca aacgttacaa
    58141 tcgtatcatt gattgaataa ccgataatcg tcagtaccgc tgcaatgaac gtaatgtcaa
    58201 cctctagtct gaacaaactg aagaccgcaa taatcataaa tgcatcatgt aacaaggata
    58261 tgatagaggc aatacccata cgccattcga aacgtaacga aatgtaaatg atcatgccga
    58321 ttgaagcaat aattacggct aacatcgcat ttttcgctaa ttcttgtcca atgactggtg
    58381 aaaccgtatt gactgacggt tctttaccat attgcgattt caatgtatct gttacttttg
    58441 cgacttcatc tttattcaag tcacgtttaa attgcattga agcattttca ttattgctac
    58501 caccgataga tagttgattt ggtttaagat caatcgattc catcgttttt tcaacttgtg
    58561 cttgtgtcaa tttttggtta ctttgtaagt caacacgtgt acctgatgta aaatcaatcc
    58621 ctaaattcaa cttgaatatc gcaagaatga tgacacctgc tacaatcacg acgccactca
    58681 atgcaaataa cggttttgcc catttcatga aatctacttt atcataaggc gtgcttaatt
    58741 catgcacatc ataacctttg ttaatatcat gaatttgtga ttgtttaaca ccaaaccacc
    58801 ataatttttt cttaaagaca ttagaatgta ccacgagtga taataaaaca cgtgttaaaa
    58861 atacagctgt tacgaaactc atcagaatcg caagtaataa catcgtcgcg aaacctttga
    58921 ctgaactttc accaaagaag aaaagtaccg ctgccgctaa tacagtagtt aagttggcat
    58981 cgagaattgt aataaacgaa cttttattcg ctttcttata cgcttgcttt aatgtgcgac
    59041 cgatacgaat ttcgtcttta atccgttcgt acataatgat gtttgcatcg acggccatcc
    59101 cgacaccaag aacgagtgcg gctaagcctg gtaatgtcag cacaccagaa ataaagttaa
    59161 atgcaaccat agttaagtaa atgtacgtcg ttaacgtaat cacagctaca atacctggta
    59221 agcgatagaa tagtagcata aataagaaaa taatgccgat accaatcata gatgcattaa
    59281 ttgttttatc taaagcatct tgtccaaatt gcgcacctac tgatgttgag taaatttctt
    59341 ttaattctac aggaagtgaa cctgaattta ataagtcagc aatttgtttc gcttcagaaa
    59401 tacctttttc accttggaac ccaccagaaa tttcaacgtt agtcgaattg atcggttggt
    59461 ttacagaagc ggcagaaata aatttaggat cttctttcgt tttttctttt tcataactgt
    59521 cgcctttttc gaaatctaac caaacgacca tcacattttc ttgcttttta gaaatttctt
    59581 ctgtcacttt tttaaactta tcactgtctt ttaatttgaa agtcacagcg ggttgattcg
    59641 tattttgttt aaactcttgc ttagctgaac cttgcacaag atctttacct gttaataaaa
    59701 ctttgtcatc tgcatcacga atcgttaagt tcgcttgtga agacaaaatt ttacgcgctt
    59761 ggttttggtc ttgtacccct gccagctgaa cgcggattcg gttttgatct tcaacttgaa
    59821 ttttaggttc tgataccccg agaacattga cacgacgttc taacgtttta gctgtcgatt
    59881 gtactgcagt gttatcaatt ttttcaccat ctccaagggg attaacttgg tacaacactt
    59941 caaatccacc ttgaaggtca agtcctaagt taacattttt gattacactt ttatatgtcg
    60001 cactcatgcc cgcaaacaag agtactacaa gtaatataaa ggtaatcagt ctacttactt
    60061 ttttcacatg aacacctcat ttaatcttat gtcacaagca tacttgaatt attccgttta
    60121 gtgcaagtca ttttgagcaa ccaataaaaa agacatggtg ttaagccatg tcctttattg
    60181 tatgcaaact tacggataca atcaatgttt atgaagggtc aacttgctta atggcttgct
    60241 tttcaaaagt caattctgta cctttaccgt ttacagtaat aaccgctgat gtttcatcta
    60301 ctgcacgaac tgtacctttg atgccgccga ttgtagtcac acgttgacct gcttgtaatt
    60361 gttcaaccat ttggcgatgc tctttcgcac gtttttgttg tggacgaatc ataaataacc
    60421 acatcactac aaacagtaag actaatggca ataaactaat aagtgaagac ataaatcata
    60481 actcctatct agaaattttt cggattatca acattcagac cgtattgttc gaaaaattcc
    60541 tctttaaaat ctaaaagacg gtcttctcga atagcctgtc taatgttctc cattaatttt
    60601 aacagaaaat gaagattatg gtaagtagta agacgaatac caaatgtttc atctgcttta
    60661 atcaagtgtc gtaagtatgc acgcgtatag ttttgacacg tataacaatc acaattctca
    60721 tctaaaggac ggaaatcatc tttaaattgt gcatttttta cgacgaggcg ccctgttgat
    60781 gtcatacaag tcccattacg tgcgatacgt gtaggcaaca cacagtcaaa catatccata
    60841 ccacgaatac tacattcaat caaggcatct ggtgaaccca cacccattaa ataacgtggt
    60901 ttatctttcg gcataaactg ctccgtatgt tctaccattt cgtacatgac aggtttcggt
    60961 tcgccaactg acaatccacc aatcgcgtaa ccaggaaaat caagtttcac aagttcttcg
    61021 gcagactgtt gacgtaaatc tttatattca ccaccttgaa taatgccaaa tagcgcttga
    61081 tcttcaggac gttggtgcgc tgctaaacaa cgctccgccc atcgtgttgt acgctctaat
    61141 gagtttttca cataatcgta ttcagcaggc atcggtggac attcatcaaa tgccataata
    61201 atatctgagc ctaagtcgtt ttggatttta atagaatctt caggtgagag aaataatttc
    61261 gaaccatttg tatgatgtcg aaattctaca ccttcttctg tgattttccg caagttactt
    61321 aaactgaata cttggaagcc gcctgaatct gttaaaatcg gtccatccca gttcatgaac
    61381 ttgtgtaatc ctccagcttg tttcacgata tcattgccag gttgcaacca taaatgatac
    61441 gtattaccaa gcaaaatttt agtgttcatt tgttttaatt cttcagggct cattgttttc
    61501 accgttgctt tcgttcctac tggcataaac atcggtgttt caaaagaacc atgaggcgtg
    61561 tgcacaattc ctaaacgtgc acccgattgt ttacaagttt ttatatgctc atatgttact
    61621 gcaggcatca tattctcctc tcaaactaaa taataatcat cgcgtcaccg aaactaaaaa
    61681 atcgatactt ttcagcaact gcatggtgat acgctgataa cacaaattga cgtgaactaa
    61741 atgctgacac aagcatcacc aatgttgatt tcggtaaatg aaagtttgta attaaaccgt
    61801 caattgcctt aaattcaaat ccaggataaa taaaaatatt ggtccaacca ctcgttgctt
    61861 ggaatgtatc aaactgactc cgaatcgttt caagtgtacg tgtggacgtc gttcctaccg
    61921 aaataattcg atgtcctgcc gctttcgttt gatttaaaat atcggcagtt tcttgtgaca
    61981 tttgataata ttcactatgc atttcgtgat catcaatatg gtcaacactg acaggtctaa
    62041 atgtgcctaa accgacatgc agtgtaataa atgcaatttg aacaccttga cgtcggatat
    62101 cgtccaataa agcatctgta aaatgtagtc ctgctgtcgg tgcggctgct gaacctgctg
    62161 ctttagcgta aaccgtctga tagcgttctt tttcatctaa acgttcttta atatatggcg
    62221 gtaatggcat ttcaccgagt tcatctagtc tttcttgcaa aatgccttca taactcaaac
    62281 gcatgatacg cccgccttga tccaactctt taatacaagt tgctttaatt ttaccttcac
    62341 caaagcttaa cgtttgtcca agcttaattc gcttcgccgg ttttaaaagg acttcccaat
    62401 cgtcaccttc aatttgtgtc agcattaaca tttctacttt ggcgttcgtt tcttctttta
    62461 tcccaaacaa acgtgctggc atcacgcgcg tgtcattgag cactaacgta tctccaggtt
    62521 ggaaaaaacg ggtgatatcc ttgaaatgta aatcctcagt ctcgcctgtg tcgcggttca
    62581 aatataataa acgactttga tctcgctgtt taagcggagt ttgagcgatg agtgattcag
    62641 gtaatacata atcaaattct tctatgttca aaataatgac tccttcactt atgggctcgt
    62701 atatttaaaa tgttcgtacg cataaggtgt tgcttttcgg cctcgagggg tacgctctaa
    62761 aaaccctttc tgaatgagaa atggttcata aacatcttca atcgtcaccc tttcctcacc
    62821 aattgagaca gcaatcgtgt ccaaaccaac aggaccacct cgatattgtt caataataca
    62881 agccatcatt ttatggtcga tataatccaa tccttcatcg tccacttgaa gtaatttcaa
    62941 cgcatgcttt gttgtttcaa tataaatcat atcgtcttgt ttcacttgtt gaaaatcacg
    63001 aatccgtttc aacaagcgat tggcgatacg tggcgtccct cggcttcttt tcgcaatttc
    63061 aaaagcactt tcttcatcaa tggcagttcc taatacttct gctgttcgta taatgatttg
    63121 tgttagttct tcttcagtat aatattcaag ccttaaatgc acgccaaaac gatctcgtag
    63181 tggactcgtc aaactaccgg cacgtgtcgt tgcaccaact aaagtaaatg gaggtaagtc
    63241 aatacgaata cttcttgctt cgtcgccttt acctacgatg atatctaaga aaaagtcttc
    63301 cattgctggg taaagcactt cttcaacaac gctacttaaa cgatgaattt catcaataaa
    63361 gagcacatca ccgggttgca gagctgttaa aatggcagct aaatcacctg gtcgttcaat
    63421 cgacggaccg gaaacagtac gcaaattgac atccatttca tttgcgataa tgtgtgacaa
    63481 agtggtttta cctaaaccag gtgggccaaa aagtaagacg tgatctaatg gctcctcacg
    63541 aattttagcg gcttgtataa acacatcaag gtttgactta attgtagact gacctatgta
    63601 ttgtcttaaa cgctcgggtc ttaatgacaa ctcaaatgtg tgttcatcta cttgttcatg
    63661 tccatccatc attcggtctc gatccatatc catcacctct ttatgaaatc aattgtttta
    63721 agccatactt aacagcttca tcgacatcac taaatatttg ttgctgcatc gctttttcca
    63781 cttttttcag ttcacgttta gagtatccta acgcctctaa cgcaagtaaa gcttcttgta
    63841 cagcaagatc ctcatgttct gtcgctatat ctaacaagcc ttcgctcact tcttccgtaa
    63901 caacgacttt accttttaaa tcaagcacaa tttgacgggc agtcttttta ccgatacctg
    63961 gaaattgtgt caaataggca tcattttcat tttcaatcgc acgtttcact tcatttggcg
    64021 aacttgctgc taaaatggct aacgctgact taggacctat ccctgttact ttaatcaaac
    64081 ttaaaaacat atccttttct tcttgatcaa taaaaccata gagcaattgc gcatcttcac
    64141 gtacaatgag tgacgtatac actttcaccg tttgatctaa gtttttttga aagcgataag
    64201 agttcggtgt ttgaatttca tacccgatac cagatgtcgt ttcaacaatg atatgcgttg
    64261 gatgtagagc tgttaatttt ccagaaatat atgcatacat tcaatagcgc tccttacatg
    64321 ttcattccaa taatgtctac gttatataca ttttccattt ggcgtagttc attaatgatt
    64381 tgatatggtc cccacttcgc atttcgaccg tctaaagata acgtaattga tgctttttga
    64441 tcagtaggga cactttgatg aatcgttaat acagaaaggt ttaattcgga aagtttttcg
    64501 agaatttgag ctaatatacc cactttatct gtcacaaata aaataatcgt aaaaacttcg
    64561 gtctgttgct gaacatcttc taacggaaat atggtatctc tatatttgta aaacgcacta
    64621 cgcgaacaat catgcatatc tacagcttct tgaatcgtaa gtgattgatc cgcttttaaa
    64681 gaggatttca cttggagcac acgttttaca acataaggca atacatcttc acgaataata
    64741 taaaattgat gtttcatcta ccatcgcaac ctccactctc aatattattc gacaaattca
    64801 aattctccac ctagaatacg tacaatatct ccattttcag cgccacgttc tctcaatgca
    64861 tcatcaatac ccattgaacg catttgtctc gcaaaacgac gaatcgctgg ttcactgttg
    64921 aagtcagtca ttttaaacat acgttcaatg gcattaccac ttacgacata tgcaccatca
    64981 tcatcgcgtg tgattgtaaa cttatcttga gacggtgtat gtttataaag gacacggttg
    65041 acgccgacct cttcttcttt cgcagagaaa tcaatatctt tgacttcttc aagtgtattg
    65101 gcaatttcat agagcaattg atcaatattt tctcgcgtat aagacgaaat cggtacaatg
    65161 gttaccgtct catcattaag ttgttcttta aacatttcga gttgtgcttc agcatctggc
    65221 atgtccattt tattcgcaac aacaatttgt ggacgatctt ctaaacgttg cgcatacgct
    65281 ttaagttctt ggttgataat ttgatagtct tcatacgggt cacgcccttc catgccactc
    65341 atatcaatca catgcacaat gactttcgta cgttccacat gtcttaaaaa ttgatgacct
    65401 aagcctacac cttcagaggc accttcaatt aaccctggta aatcggccat aatgaagcta
    65461 cgttggtcac gtgtttctac tacaccgagg ttcggttgaa tcgtagtaaa atgatacgcc
    65521 ccaattttag gtctcgcttt agaaacaatc gataataatg tagatttacc cacacttgga
    65581 aaaccaacta aaccgacatc tgccaacaat ttaagctcta atgttacgtc aatctcttca
    65641 cctggctcac cattctcact aaaatcaggc gcagggtttt taggtgtcgc gaaacgagaa
    65701 ttaccacgtc cgccacgtcc acctttagca acaaccgcac tttgaccatg ttcaacgaga
    65761 tcagctagcg tttgacccgt ctcaacatct ttaataatcg ttccaggtgg tacttttaac
    65821 acgagatcct cagcattttt accatgcatg ttactacttt gaccattgtc acctttttta
    65881 gctttaaagt gacgttgata tctaaaatcc attaatgtcc gcaagccttc atccacttga
    65941 aacacgactg aagccccacg tccaccatca ccgccagctg gaccaccaaa tgggacatat
    66001 ttttcacgac ggtatgcagt aatcccatta ccgccatcac cagcttttaa tgatattttt
    66061 acttgatcga caaacatgtt ttcacctctt ttactttaat ttctttaata atgcttatct
    66121 atcacgttat attatataac gataagttca tttaatataa aaaataaaca ccagaagtta
    66181 ccttctggtg tcaaagattg acaaattatt cagcaactgc ataaacagaa acttgttttt
    66241 tgtctcgacc tttacgttcg aatttaacaa cgccgtcgat tttagcgaat aatgtatcat
    66301 cgccaccacg acctacgttt tcacctgggt aaatcttagt tccacgttga cggaataaga
    66361 tagaaccacc agtaacgaat tgaccgtcag cacgtttagc acctaaacgt ttagattcag
    66421 agtcacgacc gtttttagta gaacttaccc cttttttcga tgcgaaaaat tgtaagttta
    66481 attttagcat gagttacacc tcacttcaga tttaatttaa tatactcatt atattcttct
    66541 tcaattgttt gtaaagaaat aagtaatgat tggagtatta actgagcctg ctcgttattc
    66601 gtatccacag ccctcacatg aaaataccca ccatcttcag aataatcaat atctggacgt
    66661 tcagaagtta agccaataat ggcattcaca ctcccaaaaa caactgccga tgcacctgca
    66721 caaacaatat cttgtccgtg ttcaccataa tctgcatgac catccataat gacatctgtg
    66781 atttgacctt cgtcatttaa cttaatatca acattaatca taattatgca ttaatcttgt
    66841 cgattgttaa tttagtgtaa ggttgacgat ggcctttttt acgtttagag tctttacgac
    66901 gacggtaagt gaaaacagtg attttcttac cacgaccttg tttgttaaca gttgctgtca
    66961 ctgtagcacc ttcaactgta ggcgcgccaa ctttaacgtt gtctccacca acaaataaaa
    67021 ctttatcaaa agtgaaagtg tcaccttcat ttacgtctaa tttctcaacg aaaatctctt
    67081 gaccttcttc tactttgatt tgttttccac ctgtttcaat aatagcaaac atactctgca
    67141 cctcctattt ataagtcacg ccatacatag gtgacataat gtacttaaaa cctatgtttg
    67201 agcggttgta tgtagctacg aactactcaa ctattgcatc ataccattcg ttttacttcg
    67261 tgtcaataga acgtttagga tttaaaaaat agtttgcagc aaagtaaagg aatatcagta
    67321 aaatcgcatt gagcaataat gtcggcagta tgcgaaatac gataaattga atgagattga
    67381 aatcaactaa gccgacaact aaataaagca taacaacaaa aacttctaaa aaaacaatac
    67441 caatcaacgt catcacatag accatcacat gatcacggaa aaatactttt aaaaacttat
    67501 cagcaaatag aatggatacg atataaccaa ataggtagac accataaatt tgtccgaaaa
    67561 acaagtcgtg gacggtacct aataatacac caagaattaa agcgatactg gtatttttat
    67621 aaaccgtaat caacactaaa aataaaaaca cgagatgggg tactaaaatg aagcgatgcc
    67681 cccctatgat aatcggtgat aagaaagtta aaacagtatc taaatagaac atgagtatcg
    67741 caacgagaat atagtaaata gatttcatta tgagccgtca ccctcatcat taacaatcgt
    67801 tttaggatct ctctttgcaa taaagacatg gtcaaaatgg ttaatattcg caccggtttc
    67861 aatcgcaact tgtttagaca aaccgtattg atcattttga acttttttca cttctcctat
    67921 gtaaagccct ttaggtaact gatcacctaa gccactcgtc acaactttgt ctccagcttt
    67981 aatcttttca ttattatcaa tatcactaat aatgagatga ttcgttttct catcgaaatg
    68041 atcaattaaa ccaaaaactt catgcccatc atgttgtacg ttcacagata agcgatttgt
    68101 gcgcccttta gtcgtgatta aatgaatttg agatgaaaat tgattcactt ttgcgacgcg
    68161 gccgactaaa ccatctgctg tcattactgc catattttct ttgatgccag attttttccc
    68221 tttatcaatg acaatcgtat ttaaccattg gtcaggttgt cgcgctatga cagctgcagt
    68281 aatgggttca tatttagaaa tatcactcat atctaattct tttttgagat ttttattttc
    68341 tgatttaaga cgttcatttt cagcttctaa ttgtttttct ttattcgttg gcttttcagt
    68401 cttatgaaaa atatccgaga ttgacccagc aataaaatga attggatagg agaagaccct
    68461 ctgtccaaaa gaagtggtat cactaacata ctgttcagga actgattgtg cgtgcgaacg
    68521 aattgataat ccaattaaag cgataaatag tattaatgca caaaacaaca caacgagttt
    68581 gttgttttta aaaaaattgg acaacctcaa cacctcaaac tatatttcaa tgtatgtact
    68641 gttatcattt tatattactc tggaaagtaa ataaagtccc atgctgtaca atattgataa
    68701 atatctgtat gaacatgatt atctcgtaac aattgacac
//
LOCUS       DANHPA010000002        60087 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.002, whole genome shotgun sequence.
ACCESSION   DANHPA010000002 DANHPA010000000
VERSION     DANHPA010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 60087)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 60087)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..60087
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.002"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..314)
                     /locus_tag="PTC28_000070"
     CDS             complement(<1..314)
                     /locus_tag="PTC28_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000204270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDK5715396.1"
                     /translation="MTSSKYIEYLQNEVEGQLLDRKRASINPKDVAQHISAFANAEGG
                     KLVIGIEDNGEISGFNHSKAKNKEVYIEAPFEHLYRIPKYTHEIIEVKKRDGTMDEIL
                     IF"
     gene            complement(415..618)
                     /locus_tag="PTC28_000071"
                     /pseudo
     CDS             complement(415..618)
                     /locus_tag="PTC28_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219999.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
     gene            complement(738..1136)
                     /gene="rpsI"
                     /locus_tag="PTC28_000072"
     CDS             complement(738..1136)
                     /gene="rpsI"
                     /locus_tag="PTC28_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HDK5715397.1"
                     /translation="MTLAQVEYRGTGRRKNSVARVRLVPGEGNIKVNDRDVREYLPFE
                     SLILDLNQPFDVTETKGNYDVLVNVHGGGFTGQAQAIRHGIARALLEADPEYRGSLKR
                     AGLLTRDPRMKERKKPGLKKARRSPQFSKR"
     gene            complement(1150..1587)
                     /gene="rplM"
                     /locus_tag="PTC28_000073"
     CDS             complement(1150..1587)
                     /gene="rplM"
                     /locus_tag="PTC28_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019468667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HDK5715398.1"
                     /translation="MRQTFMANESNIERKWYVVDAEGQTLGRLSSEVAAILRGKNKVT
                     YTPHVDTGDYVIIINASKIELTGNKENDKIYYRHSNHPGGLKSITAGELKRTNPERLL
                     ETSIKGMLPSSRLGEKQGKKLFVYGGAEHPHAAQQPENYELRG"
     gene            complement(1796..2599)
                     /gene="truA"
                     /locus_tag="PTC28_000074"
     CDS             complement(1796..2599)
                     /gene="truA"
                     /locus_tag="PTC28_000074"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HDK5715399.1"
                     /translation="MQRVLVKISYNGAQFLGFQIQNQGRTIQGYFEKILKRMHQQHVR
                     IHPSSRTDRGVHAKAQYFHFDTHLNITPERWQHAMNSALPDDIYVHDVSFIDQDFHCR
                     YDCVGKRYRYSIYQAEHRNPFWSQLKTFEPKALDIEAMQRAAQYFVGTHNFTTFCSQK
                     TEVESKERTIYESRIEQTADGIDFVITGSGFLYNMVRVIMAYLLEVGKGKRSADDVPN
                     LLAQQDRNLVPHTAPAEGLYLEKIYLAAEQLTADFGDHIQIHSKKSTQI"
     gene            complement(2615..3418)
                     /locus_tag="PTC28_000075"
     CDS             complement(2615..3418)
                     /locus_tag="PTC28_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HDK5715400.1"
                     /translation="MKDKLIIGRFLPLDTVIHRLDPRAKLIFVFLFIIIIFFSHAPLS
                     YLWLALILLTVTKLARIPLWFLIKGLLPVFFFLILTFMMHLFLTKGGTRLIEWGFITI
                     DSNGIREGILIMLRLGFIMIVSTILTLTTSPLNLTDAFDRLFKPLKYIKIPVAALSMM
                     MSIALRFIPTLMEELDKIILSQKSRGSDISSGSLAARIKAFIPLLIPLFISAFQRAEE
                     LAIAMEVRGYDANAERTSYRILKWQLKDTLLIISLVPIAAVSLWLGHTF"
     gene            complement(3408..4274)
                     /locus_tag="PTC28_000076"
     CDS             complement(3408..4274)
                     /locus_tag="PTC28_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter ATPase"
                     /protein_id="HDK5715401.1"
                     /translation="MIKFEEVSYTYQKNTPYEYQALNQISTEFLPGCYYAIIGKTGSG
                     KSTLIQHFNGLVKPTRGKVQVLDVIVNRKTKDKHLKSIRQRIGMVFQFPESQLFEETV
                     EKEVLFGPRNYGLDIEEARDKAMTLLGELGFDAEKVMQQSPFLLSGGQMRKIALAAIL
                     AMDPDILILDEPTAGLDPRSKAQVMALFKKLQLEEGKTIILVTHDMNDVAEFADEIKI
                     MQGGTLIESTTPYDFFQRPDDVNALHLCLPDIVRLQRDVEAKLGVQFDKLALTEASFV
                     AIYEEWRQRHEG"
     gene            complement(4271..5080)
                     /locus_tag="PTC28_000077"
     CDS             complement(4271..5080)
                     /locus_tag="PTC28_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter ATPase"
                     /protein_id="HDK5715402.1"
                     /translation="MEHEHLIEFDHVSFQYHEDQPKVLNDIQFKVNKGEWLSIVGHNG
                     SGKSTLAKLLTGIEQNYQGDIRINGSSIKGVDRSAFEHHIGIVFQNPENQFVGSTVSY
                     DVAFGLENKGLSYNEMHDIVPLVLKDVDMYDKQHHEPTALSGGQKQRVAIASVLALEP
                     QLIILDEATAMLDPEGKRDILAMVKALNRHKGVTVIAITHDLSEVVSSDRVIVMNRGE
                     VFLEGTVEKIFEKGEALVEIGLDLPFEMRMAQKLNLSQSFITYEGLLERLT"
     gene            complement(5561..5929)
                     /gene="rplQ"
                     /locus_tag="PTC28_000078"
     CDS             complement(5561..5929)
                     /gene="rplQ"
                     /locus_tag="PTC28_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002450507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HDK5715403.1"
                     /translation="MGYRKLGRTSDQRKAMLRDLATSLIVSERIETTEARAKELRSVV
                     EKLITLGKKGDLASRRNAAKTLRNVQILNEDETTQTALQKLFGEIAERYQERQGGYTR
                     ILKVAPRQGDGALKVIIELV"
     gene            complement(5946..6890)
                     /locus_tag="PTC28_000079"
     CDS             complement(5946..6890)
                     /locus_tag="PTC28_000079"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011302606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HDK5715404.1"
                     /translation="MIEIEKPRIETIEVSDDAKFGKFVVEPLERGYGTTLGNSLRRIL
                     LSSLPGAAVKYIEIEGVLHEFSAIDHVVEDVSTIVMNIKKLALKIYSEEDKTLEIDIK
                     EEGEVTAKDIMHDSDVEILNPDLKIATVSKGGHLKLRLVANTGRGYALADQNNSSDLP
                     IGVIPVDSLYSPVERVNYTVENTRVGQSSDFDKLTLDVWTDGSITPQESVSLAAKIMT
                     EHLNIFVGLTDEAQNAEIMIEKEEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQE
                     LADKSEADMMKVRNLGRKSLEEVKYKLEDLGLGLRKED"
     gene            complement(6966..7355)
                     /gene="rpsK"
                     /locus_tag="PTC28_000080"
     CDS             complement(6966..7355)
                     /gene="rpsK"
                     /locus_tag="PTC28_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016998822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HDK5715405.1"
                     /translation="MARKQVSRKRRVKKNIENGVAHIRSTFNNTIVTITDEFGNALSW
                     SSAGALGFKGSKKSTPFAAQMASETASKAAMEHGLKSVEVTVKGPGPGRESAIRALQS
                     AGLEVTAIKDVTPVPHNGCRPPKRRRV"
     gene            complement(7380..7745)
                     /gene="rpsM"
                     /locus_tag="PTC28_000081"
     CDS             complement(7380..7745)
                     /gene="rpsM"
                     /locus_tag="PTC28_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012748902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HDK5715406.1"
                     /translation="MARIAGIDIPRDKRVVISLTYIYGIGKTSAQKILSEANVSEDTR
                     VKDLTDDELGRIREVVDGYKVEGDLRRETNLNIKRLMEISSYRGIRHRRGLPVNGQKT
                     KNNARTRKGPVKTVANKKK"
     gene            complement(7769..7882)
                     /gene="rpmJ"
                     /locus_tag="PTC28_000082"
     CDS             complement(7769..7882)
                     /gene="rpmJ"
                     /locus_tag="PTC28_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003720928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HDK5715407.1"
                     /translation="MKVRPSVKPICEKCKVIKRKGKVMVICENPKHKQKQG"
     gene            complement(7914..8132)
                     /gene="infA"
                     /locus_tag="PTC28_000083"
     CDS             complement(7914..8132)
                     /gene="infA"
                     /locus_tag="PTC28_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017185218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HDK5715408.1"
                     /translation="MAKQDVIELEGTVLDTLPNAMFKVELENGHEILAHVSGKIRMNY
                     IRILPGDKVTVEMSPYDLTRGRITYRYK"
     gene            complement(8299..8952)
                     /locus_tag="PTC28_000084"
     CDS             complement(8299..8952)
                     /locus_tag="PTC28_000084"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HDK5715409.1"
                     /translation="MNIILMGLPGAGKGTQASEIIKKYPIPHISTGDMFRKAIKDETE
                     LGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNSILEE
                     LGRTIDAVVNIEVPEEELMNRLTGRRICETCGTTYHLVFNPPKVEGICDIDGGKLYQR
                     EDDNPETVANRLEVNVKQSKPILEFYNQKGLLKNIDGSKHIDEVTSDVIEILESLKS"
     gene            complement(8970..10262)
                     /gene="secY"
                     /locus_tag="PTC28_000085"
     CDS             complement(8970..10262)
                     /gene="secY"
                     /locus_tag="PTC28_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HDK5715410.1"
                     /translation="MFHTLVNFFKTKEVRNKILFTLAMLVIFKIGTYIPAPGVNPAAF
                     DNRQGSQGVTDLLNTFGGGALKNFSIFAMGIMPYITASIVMQLLQMDIVPKFTEWAKQ
                     GETGRKKLNNFTRYFTIVLAFIQSIGMSFQFNNYLDGALIKEQNVWSYLLIAIVLTSG
                     TAFLMWLGEQITQYGVGNGISIIIFAGILSTLPSGLMQFYQQEFIGQDDVTFAWLKVA
                     GLVVGMILLTVGAVYVLQAIRKIPIQYAKKQSHMRLGSQATYLPLKVNSAGVIPVIFS
                     MAFFLLPRTLSLFFPDADWAQKLGNYADPSHNMGMVVYVVLIIAFTYFYAFVQVNPEK
                     MAENLKKQGSYVPGIRPGEQTKKYITKVLYRLTFVGSIFLAVIAILPIIATKFMNLPQ
                     AIQLGGTSLLIVIGVAIETMKSLEAQVNEKEYKGFGRR"
     gene            complement(10262..10702)
                     /gene="rplO"
                     /locus_tag="PTC28_000086"
     CDS             complement(10262..10702)
                     /gene="rplO"
                     /locus_tag="PTC28_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HDK5715411.1"
                     /translation="MKLHELKPSEGSRKLRNRVGRGAGTGNGKTSGRGQKGQKARSGG
                     GVRPGFEGGQLPLFRRIPKRGFTNINRKEYAIVNLDQLNQFEDGTEVTPELLIETGVV
                     KNEKAGIKVLGNGSLEKKLTVKAHKFSASAKAAIEAKGGAQEVI"
     gene            complement(10719..10898)
                     /gene="rpmD"
                     /locus_tag="PTC28_000087"
     CDS             complement(10719..10898)
                     /gene="rpmD"
                     /locus_tag="PTC28_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HDK5715412.1"
                     /translation="MAKLQITLTKSVIGRPETQRKTVKALGLGKVNSSVTVEDNAAIR
                     GQINKVSHLVSVEEK"
     gene            complement(10915..11415)
                     /gene="rpsE"
                     /locus_tag="PTC28_000088"
     CDS             complement(10915..11415)
                     /gene="rpsE"
                     /locus_tag="PTC28_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016426364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HDK5715413.1"
                     /translation="MARREEEVKEFEERVVTINRVAKVVKGGRRFRFTALVVVGDKNG
                     RVGFGTGKAQEVPEAIKKAVEAAKKDLITVTRVDGTTPHTITGRFGSGSVLMKPAAPG
                     TGVIAGGPVRAVLELAGITDILSKSLGSNTPINMVRATINGLKNLKNAEDVARLRGKT
                     VEELYN"
     gene            complement(11438..11797)
                     /gene="rplR"
                     /locus_tag="PTC28_000089"
     CDS             complement(11438..11797)
                     /gene="rplR"
                     /locus_tag="PTC28_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HDK5715414.1"
                     /translation="MISKIDKNKVRLKRHARVRTKLSGTSEKPRLNVYRSNKHIYAQI
                     IDDTKGVTLVQASTKDSEVDASTTKVEMASKVGEVIAKKANEKGIEAVVFDRGGYLFH
                     GRVKALADAARENGLQF"
     gene            complement(11829..12365)
                     /gene="rplF"
                     /locus_tag="PTC28_000090"
     CDS             complement(11829..12365)
                     /gene="rplF"
                     /locus_tag="PTC28_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001829740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HDK5715415.1"
                     /translation="MSRVGKKIIEIPSDVTVTIEGNTVSVKGPKGELSQTLNEEMTYK
                     QDENTLEVVRPSDSKEHRTIHGTTRALINNMVQGVSKGYEKTLELIGVGYRAQVQGSK
                     LVLNVGYSHPVEFEAAEGITFSVEKNTTVKVEGIDKELVGATASKIRDVRPPEPYKGK
                     GIRYQGEYVRRKEGKTGK"
     gene            complement(12394..12792)
                     /gene="rpsH"
                     /locus_tag="PTC28_000091"
     CDS             complement(12394..12792)
                     /gene="rpsH"
                     /locus_tag="PTC28_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000178880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HDK5715416.1"
                     /translation="MTLSDPIADMLTRVRNANMVRHEKLELPASNIKKEIAEILKNEG
                     FIKNVEYIEDDKQGVIRLFLKYGSNNERVITGLKRISKPGLRVYAKANEVPKVLNGLG
                     IALVSTSEGVITDKEARKRNVGGEVLAYIW"
     gene            complement(12823..13008)
                     /locus_tag="PTC28_000092"
     CDS             complement(12823..13008)
                     /locus_tag="PTC28_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011245027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HDK5715417.1"
                     /translation="MAKKSMVVKQQRKQKFQVREYTRCDRCGRPHSVYRKFKLCRICF
                     RELAYKGQIPGVRKASW"
     gene            complement(13030..13569)
                     /gene="rplE"
                     /locus_tag="PTC28_000093"
     CDS             complement(13030..13569)
                     /gene="rplE"
                     /locus_tag="PTC28_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HDK5715418.1"
                     /translation="MNRLKEKFNSEVTQNLVKKFNYSSVMEVPRIDKIVVNMGVGDAV
                     QNSKVLDNAVEELTAITGQKPLITKAKKSVATFRLREGMPIGAKVTLRGERMYEFLDK
                     LISVSLPRVRDFRGVSKNAFDGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTA
                     NTDEEARELLTQFGMPFQK"
     gene            complement(13595..13909)
                     /gene="rplX"
                     /locus_tag="PTC28_000094"
     CDS             complement(13595..13909)
                     /gene="rplX"
                     /locus_tag="PTC28_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HDK5715419.1"
                     /translation="MHIKKGDNVIVIAGKDKGKTGKVVATQPKKDRVVVEGVNIVKKH
                     QKPTQMNPEGGILETEAAIHVSNVQILDPKTNEPTRVGYKFVDGKKVRIAKKSGEEIK
                     SN"
     gene            complement(13953..14321)
                     /gene="rplN"
                     /locus_tag="PTC28_000095"
     CDS             complement(13953..14321)
                     /gene="rplN"
                     /locus_tag="PTC28_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012727667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HDK5715420.1"
                     /translation="MIQQETRLKVADNSGAREVLTIKVLGGSGRKTANIGDVIVATVK
                     NATPGGVVKKGDVVKAVVVRTKSGVRRKDGSYIKFDENACVIIRDDKGPRGTRIFGPV
                     ARELREGNFMKIVSLAPEVL"
     gene            complement(14350..14613)
                     /gene="rpsQ"
                     /locus_tag="PTC28_000096"
     CDS             complement(14350..14613)
                     /gene="rpsQ"
                     /locus_tag="PTC28_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011983253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HDK5715421.1"
                     /translation="MSERNDRKVYVGKVVSDKMDKTVTVLVETYKTHKLYGKRVKYSK
                     KYKAHDENNSAKFGDIVKIQETRPLSATKRFRLVEIVEESVII"
     gene            complement(14639..14848)
                     /gene="rpmC"
                     /locus_tag="PTC28_000097"
     CDS             complement(14639..14848)
                     /gene="rpmC"
                     /locus_tag="PTC28_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002509269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HDK5715422.1"
                     /translation="MKAKEIRDLTTSEIEEQIKSSKEELFNLRFQLATGQLEETARIK
                     TVRKTIARLKTVARERELEQGKANQ"
     gene            complement(14838..15272)
                     /gene="rplP"
                     /locus_tag="PTC28_000098"
     CDS             complement(14838..15272)
                     /gene="rplP"
                     /locus_tag="PTC28_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001829782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HDK5715423.1"
                     /translation="MLLPKRVKYRRQHRPDTKGRSKGGNFVTFGEYGIQATTTSWITS
                     RQIESARIAMTRYMKRGGKVWIKIFPHTPYTQKPLEVRMGAGKGAVEGWIAVVKPGRI
                     LFEVAGVSEEVAREALRLASHKLPVKTKFVKREELGGETNES"
     gene            complement(15275..15928)
                     /gene="rpsC"
                     /locus_tag="PTC28_000099"
     CDS             complement(15275..15928)
                     /gene="rpsC"
                     /locus_tag="PTC28_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HDK5715424.1"
                     /translation="MGQKINPIGLRVGVIRDWDAKWYAEKDFASLLHEDLKIRKFIDK
                     ALKDASVSHVEIERAANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNQLTDKKVHINV
                     VEIKKVDLDARLVAENIARQLENRASFRRVQKQAIGRAMKLGAKGIKTQVSGRLGGAD
                     IARAEQYSEGTVPLHTLRADIDYAHAEADTTYGKLGVKVWIYRGEVLPTKKNSEGGK"
     gene            complement(15952..16305)
                     /gene="rplV"
                     /locus_tag="PTC28_000100"
     CDS             complement(15952..16305)
                     /gene="rplV"
                     /locus_tag="PTC28_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000387528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HDK5715425.1"
                     /translation="MEAKAVARTIRIAPRKVRLVLDLIRGKDVREAVAILKLTNKASS
                     PVVEKLLMSALANAEHNYGMNTDQLVVKEAYANEGPTLKRFRPRAQGRASAINKRTSH
                     ITIVVSDGQEEAQEA"
     gene            complement(16339..16617)
                     /gene="rpsS"
                     /locus_tag="PTC28_000101"
     CDS             complement(16339..16617)
                     /gene="rpsS"
                     /locus_tag="PTC28_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000533765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HDK5715426.1"
                     /translation="MARSIKKGPFVDDHLMKKVEAQGDSEKKQVIKTWSRRSTIFPNF
                     IGHTFAVYDGRKHVPVYVTEDMVGHKLGEFAPTRTFKGHAADDKKTRR"
     gene            complement(16682..17515)
                     /gene="rplB"
                     /locus_tag="PTC28_000102"
     CDS             complement(16682..17515)
                     /gene="rplB"
                     /locus_tag="PTC28_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HDK5715427.1"
                     /translation="MALKHYKPITNGRRNMTTLDFAEITKSEPEKSLLQPLPKKAGRN
                     NQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGKVDSIQYDPNRSANIALIVYADGEKR
                     YIIAPKGLEVGQIIESGSEADIKVGNALPLKDIPVGSVIHNIELKPGRGGQLARSAGA
                     SAQVLGKEGKYVLVRLRSGEVRMILSTCRATIGQVGNLQHELVNIGKAGKSRWLGKRP
                     TVRGSVMNPNDHPHGGGEGRAPIGRPSPMSPWGKPTLGKKTRRGKKRSDKLIVRGRKR
                     K"
     gene            complement(17547..17822)
                     /gene="rplW"
                     /locus_tag="PTC28_000103"
     CDS             complement(17547..17822)
                     /gene="rplW"
                     /locus_tag="PTC28_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002506966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HDK5715428.1"
                     /translation="MEARDILKRPVITEKSSAAMAEDKYTFDVDVRANKTEVKKAVEE
                     IFEVKVANVNIINYKPKKKRMGRYQGYTNKRRKAIVTLKEGQIDLFN"
     gene            complement(17822..18445)
                     /gene="rplD"
                     /locus_tag="PTC28_000104"
     CDS             complement(17822..18445)
                     /gene="rplD"
                     /locus_tag="PTC28_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HDK5715429.1"
                     /translation="MANYDVYKVDGSKAGTVELSDSVFGIEPNNDVLFEAINLQRASL
                     RQGTHAVKNRSAVRGGGRKPWRQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYGYKMP
                     KKMRRLALRSALSYKVQENGFKIVDSFNLEAPKTKEFKTTLTNLELPKKVLVVTVGED
                     VNVELSARNIPGVTITTPEGLNVLELTHADSVLITQEAAKKVEEVLG"
     gene            complement(18472..19131)
                     /gene="rplC"
                     /locus_tag="PTC28_000105"
     CDS             complement(18472..19131)
                     /gene="rplC"
                     /locus_tag="PTC28_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000160215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HDK5715430.1"
                     /translation="MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVD
                     GYNAIQIGFENKEAYKKGRKTNKYATKAAEGHAKKADAAPKRFIREFRNVNVDDYEVG
                     QEVSVDTFEVGDIIDVTGTSKGKGFQGAIKRHNQSRGPMSHGSHFHRAPGSIGMASDA
                     SRVFKGQKLPGRMGGNTVTVQNLEVVQVDTENNVILVKGNVPGPKKGFVQIQSAIKAN
                     K"
     gene            complement(19159..19467)
                     /gene="rpsJ"
                     /locus_tag="PTC28_000106"
     CDS             complement(19159..19467)
                     /gene="rpsJ"
                     /locus_tag="PTC28_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001118669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HDK5715431.1"
                     /translation="MAKQKIRIRLKAYDHRVIDQSAEKIVETAKRSGADVSGPIPLPT
                     EKAVYTIIRAVHKYKDSREQFEQRTHKRLIDIVNPTPKTVDALMGLNLPSGVDIEIKL
                     "
     gene            19930..20316
                     /locus_tag="PTC28_000107"
     CDS             19930..20316
                     /locus_tag="PTC28_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715432.1"
                     /translation="MTRNSKTALVILSIIALVSEFITGFPLLGGWYVLALGWQPLAFN
                     AFIYLIMVLIFIFNRQNTIRPMLLIPAGGIIASALAVIPFVGMILHWIMFVLMIFLLI
                     VLFVTPVYLKASYTRYTHSERDHKRY"
     gene            complement(20935..21435)
                     /locus_tag="PTC28_000108"
                     /pseudo
     CDS             complement(20935..21435)
                     /locus_tag="PTC28_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219999.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(21657..22991)
                     /locus_tag="PTC28_000109"
     CDS             complement(21657..22991)
                     /locus_tag="PTC28_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000800694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HDK5715433.1"
                     /translation="MKKYFRFDENQTSYRREILGGLTTFLSMAYILAVNPQILSLAGV
                     EGVPDALKMDQGAVFVATALAAFVGCLFMGLIAKYPIALAPGMGLNAFFAFTVVLTMG
                     IPWQTGLTGVFFSGLIFSILTVTGLRETIINAIPFEMKMAVSAGIGLFITFVGLQGSG
                     IIKNEEATLVTLGKITDPGVLLAVFGIIITVVLYAKKIPGAIFIGMVATSIVGLLTQQ
                     IAPPNAIIGKVPSIAPTFGAAFESLQDPSQLFTIQFLIVILTFLFIDFFDTAGTIVAV
                     ASQAGMMKDNKLPRAGRALFSDSLATMVGAVFGTTTTTSYIESTSGVAVGARTGFASI
                     VTGVCFLLALFFNPLMAVVTPAVTTPALVVVGVLMASNLAEISWKRFEVAVPAFITII
                     MMPLSYSIATGIACGFIFYPITMVLTKRHKEVHPIMYGLMVIFILYFAFVHG"
     gene            complement(23112..25247)
                     /locus_tag="PTC28_000110"
     CDS             complement(23112..25247)
                     /locus_tag="PTC28_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HDK5715434.1"
                     /translation="MSKALILAEKPSVGRDIANALNVGSRKEGYFENHQYIVTWALGH
                     LVTNATPEQYDKKYQQWVLEDLPIIPKQMKSVVISKTRKQFNTIQNLMKRSDVKELII
                     ATDAGREGELVARLIIEKAHVKKPIKRLWISSVTPKAIKEGFKKLKDGRAYQHLYEAA
                     LARSEADWIVGINATRALTTKYDAQLSLGRVQTPTIQLVAMRQEQIKNFKPQQYYTLE
                     AEVNGVTMTYQHDGRVYQKEKLEAIVNTLQNKQAQVNSVHEKEKKVYPQPLFNLTDLQ
                     QAAYQKYHLGAKQTLNTLQQLYERHKLVTYPRTDSNYLTTDMVDTLKERVQATMGTEL
                     MPYAREILKQPLAKKLSFVNNQKVSDHHAIIPTEVRANVASLSPNEQKIYTMIAQRYL
                     EVLMPPYRYRAQHVEVNIGKHVFIYQSQVPIELGFKKLQQDRAQTERAVSFKQGETFK
                     VGQLQIVAHETTPPAYFNEGTLLKAMERPDKFFDLKDKKSAQTLKSTGGIGTVATRAD
                     IIDKLFNVNAIESHDGKIKVTSKGKQILDLAPPALTSPRLTAEWEDKLMKIEKGQYKA
                     HQFMQEMKQFTHEIIHTIKSSEQKYKHDNLTSAQCPTCGKFMLRVNTKNGSMLVCQDP
                     SCKTKKDVKTKTNARCPQCKKRLTKFGTGKKATYRCVCGYTETQEHMDQRFKNKGKDK
                     VSKREMKKYMKEDELENNPFKDALKGLNL"
     gene            25388..26248
                     /locus_tag="PTC28_000111"
     CDS             25388..26248
                     /locus_tag="PTC28_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDK5715435.1"
                     /translation="MKISQVTPNPTIASFIQTYVSERPSYTNKLPLDDEQALFTFLEE
                     AADETGLFIVEEADEIQMLLLCISYSEDRYKVIGPIVKNGYEPTKETFKQLFDAITAQ
                     HYQPSTYYFAFTAQHALIKTFMKTIGASYTFTDYHLETSQDLGETQNLHHMIPYSKAY
                     YRYFQRLHEDTFTHNAMTANEIVTSLDDQHELVLYMAEGILKGYLYLIYDESERHAEI
                     KYFSSHADYRLKGIAFDLIQHAIHRALTRPEIERVYFKIRSKNHKLVERFHELGFNIS
                     SEYQKFKIYK"
     gene            complement(26330..27238)
                     /locus_tag="PTC28_000112"
     CDS             complement(26330..27238)
                     /locus_tag="PTC28_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HDK5715436.1"
                     /translation="MTENFLMILLLIALGYILKRIGYINGKDSRVISTLVLNVSLPSV
                     VIVNLNHVNLTPSLVVLPVMMILYGVVTKVLIVLMFIKYSNEVRGTVAMMMAALNIGI
                     FAYPLVQQIWPEQGLLYFGMADIGGAIVMFGLTYFAASYFKQVGGGFNPKQILWNMLK
                     SVPLMTYIIMLVLNILQWHLPHTAIRFFDILGHANLPLSMILLGVLMDFRLERRFLPL
                     TLKYLVLHYGFGALFGTLVYFFLPVDDAMIKTTLQLIWLLPVGVAALSYAVQFKYRTL
                     PVIAMASNVTIVISIVILYLYQFWFV"
     gene            27345..27515
                     /locus_tag="PTC28_000113"
     CDS             27345..27515
                     /locus_tag="PTC28_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715437.1"
                     /translation="MDLEQQLQELKMDYVRLQGDLEKRESTSQQVDPLIQQLEQIEQQ
                     IAEVRRQLRENL"
     gene            27585..27902
                     /gene="mspA"
                     /locus_tag="PTC28_000114"
     CDS             27585..27902
                     /gene="mspA"
                     /locus_tag="PTC28_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane stabilizing protein MspA"
                     /protein_id="HDK5715438.1"
                     /translation="MLAYLILLPLMYLVVAYISIFKMRIMMPKLLRVIMGLLLIIVVA
                     TSLVYYPASTWWVFVVLILLIGNVEITAFKHSKNDEKGVRILNMMSLFILVIYIVLVA
                     VFI"
     gene            complement(28042..29199)
                     /locus_tag="PTC28_000115"
     CDS             complement(28042..29199)
                     /locus_tag="PTC28_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDK5715439.1"
                     /translation="MAYTTILSEIPDSYFGKTVGQKIEHGPLPLINLAVGIPDGDTPP
                     EIIKALQEAIVKPANQKYLAFQGKDAFRQAIVDFYQRQFNVTLDPDKEVCLLYGTKNG
                     LVALPTCVIEPGDEVLLPDPGYTDYDAGVRLARGIPKPLKLSPERHYIPDWNEVDTTN
                     TKLIYLTYPNNPTGSVATLEFFQETIDRFKNTSIKIVHDFAYQAFGFDQPNPSILQAD
                     GAKSSAIEVFSFSKGYNMSGYRVGFAVGNEEMIANLRKYHTHTQAGMYGALQDACTVA
                     LNACDHELKKQNDIFRKRRDKIEAALNEAAIPHEPIKGGIFLWLQCPEGFSSDAFIQH
                     LLQEQSILAAPGHPFGEEGEGYVRLSFAIDEIQLDEAIARLVSLKPLYHQA"
     gene            complement(29403..32555)
                     /locus_tag="PTC28_000116"
     CDS             complement(29403..32555)
                     /locus_tag="PTC28_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDK5715440.1"
                     /translation="MVKKLIDFSLSNKFAILLMVFLVILGGVYASFKMRLELLPDTEP
                     PMLTITTPMPGATSETVMKEISDPIDEEIRGMAGVTSVKTQSLSNASMVTVNFDESTD
                     MDKAEQDIEKALKKVGLPDEAQTSDIKRNSMNAFPVVAYSILHDKDDVKVSTKAVKEQ
                     LIPKLQMIDGVQRATVNGQIERKVTIKFDDAKLQKAGLNAKQVSDYIEGATKESPLGL
                     FQFGDTEKSVVVDGQYASVDALKNMQIPLALASQSSGNSTQGQQDGGASERGHATSGQ
                     VSLNNPQSAQAVALSDLAEVKLSDERESISRTNGQDAVDVQIVKTQGANTVAVANDVN
                     QTIQDFVKAHPELKSVKIMDTSKPIKDSLNTMIEKALLGSIVAVIVIMLFLRNVRMTA
                     ISIVSIPLSLLIAMVALKLTDVSLNILTLGALTVAIGRVIDDSIVVIENIYRRLSRQD
                     ESLSGDGLIVSATKEVFIPIMSSTLVTIVVFAPLAFVTGSVGEMFRPFAYAITFSLLA
                     SLLVSITIVPVLGSIFFKHGLKRKPKSELGTVGRGYRKVLNWSLNHKWTVIILSTVIL
                     IGSIALGSMKIGTSFISTGEDKFMALTYTPKPGETKQKVLSHAEEVEKYLLGNQHVRH
                     VQYSVGGASPVDPTGSTNNMALMVEYDSDTPNFDQEPERVLKHIKTYHHDGEWKNLDM
                     GTGATSNTLNVEVTGPSTAAIEGTVKAIQQKMSQVPGLTNVKSDLTETYQQYEVKVNP
                     NEAAKTGMTAGQLAMMLNQNIPDMTVSKVKDQNQTYDVVVQQEKDTDWTKEKLENTPV
                     PSPTGDNRKLSDIATLKTTSTPNALVKKGGDYVSTVSATISGEDVGSISQKVMKQLNE
                     LDKPSDVHTSLGGTNEDIQEAFSQLMIAMLAAIIIVYLVLVLTFKGALAPFTILFALP
                     YTVIGVVLALIITGETLSVPSMIGLLMLIGIVVTNAIVLIDRVITNEKAGLPMKEALL
                     EAGGTRIRPILMTAIATIGALIPLLFGQDSSVLISKGLAATVIGGLLSSTLLTLIVVP
                     VIYEILFTLKAKLTRRKKKA"
     gene            complement(32774..34054)
                     /locus_tag="PTC28_000117"
     CDS             complement(32774..34054)
                     /locus_tag="PTC28_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II:glycine glycyltransferase FemX"
                     /protein_id="HDK5715441.1"
                     /translation="MKRMNITDQEHDAFVKAHPNGDLLQLTKWGDTKKLTGWYAKRIA
                     VGENGELKGVGQLLFKKIPRTPFTLCYASRGFVVDYTNTVAVKALLSEAIQVAQSEKA
                     YTIKIDPDVEVDQGMTVVQDLLKMGFKHKGFKEGLAKDYIQPRMTMITPINQSDEALI
                     QSFENRNRSKVRLALKRGTKVERKGREDLKIFADLMKETGERDGFLTRDVSYFETIYD
                     ALHPDGDAELFLVKLEPTPVLAELKVEQQHLQTEMDTLAEKDQNNKKVQNKLKDAVQK
                     MNKNQALIDDMTQLERTHPEGIYLSGALLMFAGHKAYYLYGASSNHYRDFLPNHHMQF
                     KMMQFAREKGATTYDFGGTDHNPDKDSSHYGLWAFKKAWGTRLSEKIGEFDYVLNPIV
                     YKAVEQFKPQLTQFKIKLVRQIKSIQQRKGQKNA"
     gene            34171..34425
                     /locus_tag="PTC28_000118"
     CDS             34171..34425
                     /locus_tag="PTC28_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715442.1"
                     /translation="MRQLILLLLSIINIIFIVYTFVFHIGIDYLSLRIIFVAFSLVVG
                     IYSVLLHETKQQLLLSVIEAIIALLHIVLIISAVYSVVYA"
     gene            complement(34416..35183)
                     /locus_tag="PTC28_000119"
     CDS             complement(34416..35183)
                     /locus_tag="PTC28_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDK5715443.1"
                     /translation="MIDIEFDHVIHYIDGLNQFEFPGKYLEIQSGGQHENLGTYNRLV
                     QIDLSYIELIDIYHQGKMKQQSKTDVGKHSFATSIMENGYRQGFKKICFRTHDIEQLK
                     VQFEARGLETVGPVEMTRENKKGQTIQWRLLYVANHQFDVIMPFFIEWHASDETREAD
                     LQEHFHQHLTLDMITVNTYQRQTMVDHWKQWFDMEEVESSDRYTILQTPAKKIKFKVM
                     EDKEDGIEAVQFIDQTIDAPIAFRTRGARYQFIPPHA"
     gene            35357..35803
                     /locus_tag="PTC28_000120"
     CDS             35357..35803
                     /locus_tag="PTC28_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDK5715444.1"
                     /translation="MEPSILFDHFTKLYRPYIKLVHPLLDEHQLYPAQWLVMKDIAIN
                     PGTTLVQISKRRSIEKPTTRKILKALDAQGWLLIRPGEMDKREKHLYLSESGQAIHQK
                     LKLQIGQLQQQVIEPLQLSDDEIARATDILEQLYQSLLAQLQNDEM"
     gene            36299..38170
                     /locus_tag="PTC28_000121"
     CDS             36299..38170
                     /locus_tag="PTC28_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HDK5715445.1"
                     /translation="MKSKLITSTLVLGLLTTGSIFQDLAAQAETTSSTQIHDIQGAGH
                     TSPLKDQRVEKVPGIVTYIYKANNSYYFHLQTPDAQKDNNPATSEGIIVFAGKEKPNV
                     KVGDLIHVSGTVREYAIEGYAEKQQTDLPLTEIDARPDQAGQITVQKTHQPLPQPVKI
                     KKIPQQIASPQHFSVFKPDTYAVDFWEALEGMRVEFGDVRSVGPQDHGEVFTVLNQNR
                     RETKNGGILLKPDNANGQRIAFKMNDDNKRAQDFNIVTGDRFKGPLIGYVNYGFQNYK
                     VNIDLKEMQQAYVKGKAQPKGTTLKPSENKLTVASYNLENFSNDVKSSSDDKAQKLAN
                     GIVSHMKQPDIVGVTEVQDNNGPNKGSSDASASYKRLIQAIKDAGGPTYRYVNIDPEN
                     NVDGGQPEANIRVGFLYNPERVTFNDHIPAGDATTSVAYENNQLTRNPGRIAPQDPAF
                     EDVRKSLAAQFDFKGQQVIAIANHWKSKRGDDGLFGSHQPVRLTSEPQRVEIAHRIGE
                     FTAQVQQQNPNAAIISVGDYNDFQWSKPLKTFESYGLTNKVKDVPKNKRYSYVYQGNT
                     QTLDHILVSEHLKRQTKLDMIHVNSDFTDMAGRASDHDPILAQIDFTKQINKQKKQK"
     gene            complement(38244..39266)
                     /gene="moaA"
                     /locus_tag="PTC28_000122"
     CDS             complement(38244..39266)
                     /gene="moaA"
                     /locus_tag="PTC28_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HDK5715446.1"
                     /translation="MADQILDKLGRPIRDLRISVTDRCNFRCDYCMPKEIFGDDYVFL
                     PKNQLLSFEEIVRITKLYAQLGVKKVRITGGEPLLRRDLHQLIAQITQIEGIEDIGLT
                     TNGLLLKKHGQKLYDAGLRRINVSLDAIEDRVFQAINNRDIKATTVLEQIDYAISIGL
                     KVKINVVVQKGVNDHQILPMVRYFKDKAVTIRFIEFMDVGNDNGWDFSKVVTKDEMLA
                     MIASEFDIEPVSPKYYGEVAQYYRHVGSQAQFGLITSVSDSFCSSCTRARLSSDGKFY
                     GCLFSTGSGFDIRGLLRSGMDDAEILSQLKALWHIRDDRYSDERTAETVAKRQQKKIN
                     MNYIGG"
     gene            complement(39283..39888)
                     /gene="mobA"
                     /locus_tag="PTC28_000123"
     CDS             complement(39283..39888)
                     /gene="mobA"
                     /locus_tag="PTC28_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase MobA"
                     /protein_id="HDK5715447.1"
                     /translation="MKAIILAGGHSERFGSPKAFAKINGTTFYHKLVQTLQATNMFNE
                     ILISTNEQLFSQFQHDTVVVDEPKHRDKGPLAGIYSVMSRDTDEDLYFVISVDTPMVT
                     QKAISHLYQFMVANLIEEHLDIAGFMDDARPIPTIAFYHKRVLPIIENVLQSDDLSMK
                     HVYDQVSTDWLEANTIGSPRYWYQNVNYQQDLAALEAELAK"
     gene            complement(39898..40131)
                     /locus_tag="PTC28_000124"
     CDS             complement(39898..40131)
                     /locus_tag="PTC28_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001832421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HDK5715448.1"
                     /translation="MKVLYFAEIKELVNRSEDVFHFDYAVPVADLTTLLYQTYPVIQG
                     KKFQVAINEEFARAEDLIQPYDVVALIPPVSGG"
     gene            complement(40128..40586)
                     /locus_tag="PTC28_000125"
     CDS             complement(40128..40586)
                     /locus_tag="PTC28_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HDK5715449.1"
                     /translation="MKQFEVTTQPLEPEKYRAYTLNEKQGAVVVFTGHVREWTKGVRT
                     EYLEYEAYVPMAEKKLAQIGDEITERWPGTIIAIGHRIGALQISDIAVCISVSSPHRK
                     DAYAANEYAIERIKEVVPIWKKEIWEDGAEWQGHQRGYHDDAVNKGGLST"
     gene            complement(40592..41068)
                     /gene="mobB"
                     /locus_tag="PTC28_000126"
     CDS             complement(40592..41068)
                     /gene="mobB"
                     /locus_tag="PTC28_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HDK5715450.1"
                     /translation="MIIQVVGFKDVGKTTLMEKLVAYVKRLGYAVVTIKHHGHTGEDI
                     KLPADHLDHMRHFNAGADQSIVQGHQYIESVQSADEMPLRTLIDECVTIKKSIIFVEG
                     YKHEHYDKVIVYRNEAEYAQLQQLSNVKFAIKRDATTSDEHALFAWLTEWIEMNEG"
     gene            complement(41065..42324)
                     /locus_tag="PTC28_000127"
     CDS             complement(41065..42324)
                     /locus_tag="PTC28_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HDK5715451.1"
                     /translation="MPVEKRHPIPVSEAIQRVMKQNIEMKTTTVNIYESEGYILAEDI
                     VATYDIPRFDKSPYDGFAVRSVDTVGASSDNRIQFKVIDHIGAGSVSTKQLEAGQAVR
                     IMTGAEMPQGADAVIMLEQTVETAEGFTIRKPFESLENVSIKGEETATGDVVLTKGQR
                     INAGVVAVLATFGYVDVPVFQKPTVAIIATGSELVDIDAPLEPGKIRNSNGPMIDALL
                     RKERIEAELYKIQQDDFDSSLAVVKKAFDEHDIVITTGGVSVGDFDYLPDIYKALNAD
                     VLFNKVAMRPGSVTTVAVSEGKYLFGLSGNPSACYSGFELFVKPAMYHMMHAEKCYPS
                     MVRATLMEDFKKANPFTRFIRANVVLTGREATVRPSGFNKSGAVVSIAHSNAMIVLPG
                     GTRGFEQGHDVQVILTSSEAYQRESSL"
     gene            42395..42880
                     /gene="moaC"
                     /locus_tag="PTC28_000128"
     CDS             42395..42880
                     /gene="moaC"
                     /locus_tag="PTC28_000128"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HDK5715452.1"
                     /translation="MSEFTHLNAQGHAKMVDVSDKQVTKRTAIARSSIQVNTTIYEQI
                     TQNTNKKGNVLNTAQIAGIMAAKNTSSIIPMCHPLALTGIDVDFDWDTSEKQYILHIT
                     TTVSTNGKTGVEMEALTAASVTALTIYDMCKAVDKGMVIGETYLVQKTGGKSDFNRTS
                     D"
     gene            complement(43140..43640)
                     /locus_tag="PTC28_000129"
     CDS             complement(43140..43640)
                     /locus_tag="PTC28_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaB"
                     /protein_id="HDK5715453.1"
                     /translation="MHTNVKLERPIRCAVLTVSDTRTTETDKGGQSVQTLLQTADFEV
                     EIQHYMIVKDELTAIQSTVQQWLKGDVDVIVTTGGTGIAPRDVTIEAVTPLLDKEIEG
                     FGELFRYLSFTEDVGTRALLSRAVAGTAKRTLIFCLPGSTGAVKLALNRLILPELTHL
                     VYEMNK"
     gene            complement(43656..44666)
                     /locus_tag="PTC28_000130"
     CDS             complement(43656..44666)
                     /locus_tag="PTC28_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HDK5715454.1"
                     /translation="MMMGEERYSRQVLYKGIGPGGQQKINAKAILIVGMGALGTHLAE
                     GLVRAGIEKLIIVDRDYIEHSNLQRQTLFTERDADESVPKVMAAKDMLQAIRRDVHIE
                     AYIAHVDRDFLETHVPTVDLILDATDNFETRMLINDAAYYYRVPWIYGGVVQSTYVSA
                     PFIPGQTPCFQCLVPQIPSLNLTCDTVGVIQPAVTMTTSFQLRDAFKILTETPFEPKL
                     TYGDIWEGTHFAFGMRRLQREACPTCGHQPSYPYLNARTSTYAALCGRDTIQYHHPEL
                     TFERLKSFLDAREMPYKSNGYLLQFKFENSRIVAFQDGRLLIHGLKDIDAAQVMIHKL
                     FG"
     gene            complement(44952..45557)
                     /locus_tag="PTC28_000131"
     CDS             complement(44952..45557)
                     /locus_tag="PTC28_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDK5715455.1"
                     /translation="MLNLQINMTINERHIGLQIQSNQPKIYAIQGVSGIGKTTLLNVI
                     AGICNPDYGKIEINGRVLTDTEQQRHVPIRKRHIGYLFQDYQLFPHMTVLDNITFMIR
                     LNTHIANLMKHLNIEHLKHVYPEHCSGGEKQRVALARALSMRPEILLLDEPFSSLDEG
                     TRKESMDLVKQVFDEWHIPIIFVTHSKWEADTLADEVIVIE"
     gene            complement(45558..46229)
                     /gene="modB"
                     /locus_tag="PTC28_000132"
     CDS             complement(45558..46229)
                     /gene="modB"
                     /locus_tag="PTC28_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HDK5715456.1"
                     /translation="MPDLTPFWISIRVAFVSTVIVFILGITLARIMYYRKSKWTHLIE
                     SIILLPIVLPPTVLGFLLLMFFSVDHPVGHLLTDILGIKVVFTWVGAVVASVIVSFPL
                     MYQHTVQGFRNINPRMLNTARTMGASERKIFFKITLPLSKRAIISGTMLAFARAIGEF
                     GATLMIAGYIPGKTNTLPLEIYFLVQQGREHQAWLWVLVLVSFAISIIGTMNMMNQER
                     YREVD"
     gene            complement(46239..47012)
                     /gene="modA"
                     /locus_tag="PTC28_000133"
     CDS             complement(46239..47012)
                     /gene="modA"
                     /locus_tag="PTC28_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDK5715457.1"
                     /translation="MKRWVGLLMVIGLFAVILSACGQKGTQSDDKKSTSEQPLVISAA
                     ASLTDVTKVLEKEFHKAHPNISVSFNYGGSGALREQIDKGAPVDVFMSANTKDVDMLK
                     EKGKVRHTYDYAHNKLVLIRRKGSDIQSIDQLGDNDQLAIGEVKSVPAGKYAKTYLED
                     QNKWSSVENHIVYAKDVREVLNYVKKGNAQLGFVYQTDLYVGKTPHDGVEKVLDAPLK
                     TPIVYRMGTVTDTEAANAWYDFMKSNTAQRILKDYHFEK"
     gene            complement(47103..48602)
                     /gene="galT"
                     /locus_tag="PTC28_000134"
     CDS             complement(47103..48602)
                     /gene="galT"
                     /locus_tag="PTC28_000134"
                     /EC_number="2.7.7.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose--hexose-1-phosphate
                     uridylyltransferase"
                     /protein_id="HDK5715458.1"
                     /translation="MANAAHVYQFADAIIAHGDYEAGDRIYVVNQILSRIKADDIALL
                     DTEHDIQPQAPIEIVNLLIEDAIERGAFEDILSAREQLEASLMDLITPKPSTVNREFY
                     KRYQLSPEAATDYFYQLSHLNHYIKEEAIAKNIVYHVPTAYGDFEITINLSKPEKDAK
                     QIEREKNAPESFYPKCAICMENEGYYGTMTSAARSNHRIVQMQINGEAWGFQYSPYLY
                     FNEHSILLSREHTPMLINQATFENLLDFVKQFPHYTIGSNADIPVVGGSILSHNHYQA
                     GRHTFPMALAPIERAFELKDFPTVHAGIVKWPMSVIRLMATDTEQLIEASEWIRHQWE
                     SYSDASVQVKAYSDSGERHHTVTPIARFRDGRYEMDIVLRDNQRTEEFPDGLFHPHQD
                     VQHIKKENIGLIEVMGTAILPGRLKNELQNVIAFLNGDETVDLGVHTAWAQDMKEEYD
                     FGTDDAEAIVRQEVGYKFERVLQDAGVFKRDEAGQVAFQRFIATLNVKN"
     gene            complement(48615..49607)
                     /gene="galE"
                     /locus_tag="PTC28_000135"
     CDS             complement(48615..49607)
                     /gene="galE"
                     /locus_tag="PTC28_000135"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HDK5715459.1"
                     /translation="MSMLVLGGAGYIGSHCVDQLVEVGYDVVVVDNLVKGHREAVHAD
                     ARFYEGDVRNREFLNDVFEKEDIEGVFHFCAYSLVGESVEYPLEYFNNNVYGLQVLLE
                     VMREHDVQHIIFSSTAAVYGEPEAVPIVETSQKLPTSPYGESKLVMEKMMRWCHEAYG
                     VNYAALRYFNVAGAKENGAIGEDHHPETHLIPVVLQVALGQRDELKMFGDDYDTPDGT
                     PIRDYLHVTDLISAHILAYDYLKAGGESGAFNLGTNHGYSVKEILNAAREVTGRDIPA
                     VVAPRRVGDPSKLVASSDKAKALLKWQPQHDDIHEIIRTAWEWHQKHPNGYENV"
     gene            complement(49623..50789)
                     /locus_tag="PTC28_000136"
     CDS             complement(49623..50789)
                     /locus_tag="PTC28_000136"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HDK5715460.1"
                     /translation="MQNLTQTFKNIFNGEPTLSAFAPGRINLIGEHTDYNGGFVFPAA
                     IELGTYGVGRLRDDRKIQLYSVNFESAGVMAFDLDHLDYNAEHQWANYPKGMIRYLVE
                     QFPEINRGFDIVVEGNIPNGASLSSSASIELLTGHLVTHLFGIEMERLELVKMGQRVE
                     NEFIGVNSGIMDQFIVGFGKKDHAILLDTNTLEYHYVPTEFGDYKISIMNTNKRRELA
                     ESKYNERRSECERALAQLQNYLDVQSLGEISVAQFEKYGDKIDDDVLRRRAKHAISEN
                     ERTKKAYEVLQAHDFEAFGQLLNASHASLKDDYEVTGLELDTLAEAAQQVDGVLGARM
                     TGAGFAGCAIALVHKDKIADLEAKVTKAYTETVGYAPSFYHVDIANGVRTLEEK"
     gene            complement(50832..51866)
                     /locus_tag="PTC28_000137"
     CDS             complement(50832..51866)
                     /locus_tag="PTC28_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDK5715461.1"
                     /translation="MMASIREIAKEAGVSPGTVSRVLNEDPSLSVATKTRQRIIEIAN
                     ARNYTKQKRLTRQIQIVTHASKEKEMIDPYYRELRLAIEKEVKHLNLTLKKTIRTNTL
                     TSIEQLQQVEKAGSVIVIGPFKQSVIQQLYTYNARLILINQIDAPNHIDAVSSDLYDS
                     MQVLLESLQQQHVGKVAYVGGETKVRDVGQTHDTVADARQRAYIDWCAQTNAEELYYP
                     SNWERHNGLEIGQRIAQSGALPQVVITGNDVLAVGVLQGLQQAQIRVPEDVQLVSFND
                     SEITQYTAPMISSVRIPIEEFGRQAVRLAQDQMKGQRQVAIHMQLNTYLNYRESFLKA
                     VSVDSYKDKQ"
     gene            52025..52822
                     /gene="fdhD"
                     /locus_tag="PTC28_000138"
     CDS             52025..52822
                     /gene="fdhD"
                     /locus_tag="PTC28_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HDK5715462.1"
                     /translation="MSPDFKTNQPIVRFENGVLFETEDDYVTEVPLTIMVNREEFATV
                     ICSPNQLEELVLGFLASEGVILKRDELKSLEIDERRGYAHVEITSSIHDRVQLSTKRL
                     VASCCGKSREFYFQNDAAIAKTSMSNLQLTPSQILSMMARLQAQSRVFKATGGLHNAA
                     ISDGNAFYIHRQDIGRHNALDKLYGYCIQRHIGVRDKVLIFSGRISSEILIKAAKIGV
                     GMIISKSAPTTLAVQLAHDLNITAIGFVRDDYFNIYSHPERVKQTEM"
     gene            complement(52900..53673)
                     /locus_tag="PTC28_000139"
     CDS             complement(52900..53673)
                     /locus_tag="PTC28_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDK5715463.1"
                     /translation="MEVQMSDIYSEGDIYSKDDDVTIYMTPTTPLTYDNNKWVYHQMP
                     DVTQFKADMKRQQSLHADHGVLTHLKFEFPENVKPNIDIMQLLRAEGFQVGNLELYMI
                     EAADLRQLTGPSLEIEPVTIKNMADYMHVYEPLSIQFGADYIKESAQALLTNLKKDTR
                     ALQPYIAYENAQPVGIMNVIETERTVELDGFAVTEAARGRGVGSRMQAFMGEIARERP
                     VILVADAEDTAREMYMKQGYTFVSFQYSALKELTVSVSY"
     gene            complement(53696..54256)
                     /locus_tag="PTC28_000140"
     CDS             complement(53696..54256)
                     /locus_tag="PTC28_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HDK5715464.1"
                     /translation="MNTKFLVYTALMTAIIAVMGFIPAIPLPFIPVPIVLQNVGIFLA
                     GILLGRRYGTLSVIVFLLLVFMGAPLLSGGRGGYGVFVGPSVGFLIMYPIVAFLIGWM
                     RDKYFETLDFKRTFAIIVIFGVVLLDLVGAIVMGFVIHMPLSKAIYLSLTFLPGDLVK
                     AAIASLIAIALFNNPVVSRIMQQLAK"
     gene            complement(54337..55200)
                     /locus_tag="PTC28_000141"
     CDS             complement(54337..55200)
                     /locus_tag="PTC28_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HDK5715465.1"
                     /translation="MKKIAFDIGGTYIKSAIIDENRQLQDYDKVRTPVNENDAIINYV
                     EARLQRYIQEHQLQAVAVGISTAGAVDRKARTIAYANPNILNYTGTNFVDKLSAYVQE
                     LVVYNDVDAALLGELDEREVDYESAFCLTLGTGIGGSYYQRNVGLLTGIRHRPNQIGY
                     LLYDPETKTQYEQRASTEALKQLLMRENYPHQNIQQLFEEAENGDTTARHYIQQWARE
                     VARGIAEIQIVYDPELIIIGGGVSAQGDVLLRYILPELKRYLPENYGHAKVEVAQLQN
                     HAALLGAVAEL"
     gene            complement(55181..55852)
                     /locus_tag="PTC28_000142"
     CDS             complement(55181..55852)
                     /locus_tag="PTC28_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HDK5715466.1"
                     /translation="MAEMLSRSGKSLKQTVVQKIKDYIIAESLQVGDKLPTERKLAES
                     YQVSRSVVREALSYLENTGVTESVQGRGTLVKAQDITPLIEGFLFSFQVSHGNLKDLM
                     MLRLTFELAAIDIIERKQAPLTSIAESLVDDVQAFNVSADQKFHESILTAVDSSLFQQ
                     MSAVVQAYFYQTPIETSHEENVRSMTEHRNIYEALKDGNFSLAKALLTQHLMRGAEFY
                     EKNSF"
     gene            56010..56891
                     /locus_tag="PTC28_000143"
     CDS             56010..56891
                     /locus_tag="PTC28_000143"
                     /EC_number="4.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate lyase"
                     /protein_id="HDK5715467.1"
                     /translation="MHENLKGLYAALLVPFDENGQVKEQGLRAIIRNAIDEQQLDGLY
                     VNGSSGENFLMNTEQKKEVFRITKDEAKDDIRLIAQVGSLDLNEAIELGQYATELGYD
                     SLSAVTPFYYPFTFEEIRDYYFAIIEATQNNMIVYSIPGLTGVNISIQQFEELFQNDK
                     VIGVKYTAPDFYLLERLRQAFPDKLIFSGFDEMLVQAAISGVDGAIGSTFNVNGRRIR
                     QIFEHAQNGSVEEAYRIQHDTNDIIETVLSMGLYPTLKAILAEKGIDTGVPKAPFHPF
                     NEAHRDALKTLINQYQL"
     gene            57033..58559
                     /locus_tag="PTC28_000144"
     CDS             57033..58559
                     /locus_tag="PTC28_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HDK5715468.1"
                     /translation="MGTIGFGFWNWIALILYLLIMLGVGAYFTKRAGKDTDSFFKASG
                     RLPSWVVGFSIYATTLSAITFMSTPEKSYLTDWSYIAGNIAIVAIIPLLIHFYIPFFK
                     KLKITSAYEYLEARFNPAVRVIGSVLFILFHLGRVAIVIYLPTLAITAVSDINPYLVA
                     SLVGVLCIIYTFLGGFEGVVWSDFIQGVILLGGALVIIITGIMHIDGGFGTVLNEAVS
                     NHKLISADNWKMNAAAAAIPIIFLGSIFNNLQQYTASQDVVQRYQASESLKETSHSIW
                     TNGVLALISAPLFYGMGTVLYVFYATHTALPKDFNTSSIVPYFILTEMPPFIAGLMIA
                     AIFAAAQSTISSSLNSIAACFSVDIKQRFFGIKSDATEVRMARVTTVVTGLIGMLISL
                     YLIAADSNDVWDLFLLITGLFGVPIAGIFAVGIFTKRTHGVGVIIGIFVAVIVSYFLQ
                     GQGIGGAGSPFYISIIAFMTAFIVAYIASLIIPTPKKDISGLTIFDKHGAITYVRKTK
                     "
     gene            complement(59194..>60087)
                     /locus_tag="PTC28_000145"
     CDS             complement(59194..>60087)
                     /locus_tag="PTC28_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDK5715469.1"
                     /translation="CMLILAACGQNDNQSSEKETKAFNLKTAKGEEKIDIPKDPKRIV
                     VMAPTYAGGLKYLDANIVGVSDQVDQSPVLAKQFKDVDKVGAEDVEKVASLKPDLIIT
                     YNTDKNTDKLKKIAPTIAFDYAKYNYLEQQEAMGDIVGKSDEVKKWKADWEKQTAQDG
                     KDIKAHLGNDTSVTIFEDFDKKIYAYGKNWGRGSEVLYQAFGLQMPKALDDATKKEGW
                     TEVPKEEVGKYAGDVIITAKAKDAAQPEFQKTAMWQNLEAVQNKYAFNVDSSVYWYND
                     PYTLDVIRKDLKKQLLALPTN"
BASE COUNT        17066 a        12928 c        10476 g        19617 t
ORIGIN      
        1 tcgaaaataa gaatttcatc catagttcca tcgcgtttct tcacttctat tatttcatga
       61 gtatatttag gtattctata taaatgttcg aaaggtgctt caatatatac ctctttattt
      121 tttgcttttg aatgattaaa tcctgaaatt tctccattat cttcaatacc aattactagt
      181 ttgccacctt cagcatttgc aaacgcacta atatgttgag caacatcttt aggatttata
      241 gacgccctct ttcgatctag aagctgtcct tcaacctcat tttgcaaata ttcaatatac
      301 ttactactag tcatatataa acctcgcaat cacgcatctt attgacttta ttataacatt
      361 caataagata tctatcgaat atcattatga cctctatctg cttgtcgtac aaaccccaaa
      421 gtaatttatc caacctcgcg tcacttggct aatttcagtg ataatgtctt taaaggtacc
      481 gggtctattt catttcgtta ttttccttaa ggtgcgtatt aaatttcttt ttgcttccgt
      541 agtcggtctg aaacgacaaa ccccattgac cttggttatt agacaaatca agaactttaa
      601 acgtgtgact gctcctactc ctactaccaa aactgtaacg gactttcacc gtcaagatgt
      661 tacacatgcc gggcgcacaa taaaaagaca ccttcccgca atgagaagat gtcttgaaac
      721 ataatatata atcgatatta acgttttgag aattgaggtg aacgacgggc ttttttaaga
      781 cctggttttt tacgttcttt catacgtggg tcacgtgtta ataaaccagc acgttttaat
      841 gaacctctgt attccggatc agcttctaat aatgcacgtg cgataccgtg acggattgct
      901 tgtgcttgac cagtgaagcc accaccgtga acgttaacta aaacgtcata gttgcctttc
      961 gtttctgtta cgtcgaatgg ttggtttaag tctaagatta atgattcgaa tggtaagtat
     1021 tcacgtacgt cacgatcatt tactttaatg ttaccttcac ctggtactaa acgtacacgt
     1081 gctactgagt ttttacgacg gcctgtgcct ctatattcaa cttgtgccaa tgtcatttcc
     1141 tccttctaat taaccacgta actcgtagtt ttctggttgt tgtgcagcgt gtggatgttc
     1201 agcgccacca taaacgaata attttttacc ttgtttttca cctaaacgtg aacttggtaa
     1261 cattccttta atagatgttt caagtaaacg ttctgggtta gtacgtttta actcgccagc
     1321 tgtgattgat tttaaaccac ctgggtgatt tgagtgacgg tagtaaattt tatcgttttc
     1381 tttgttacca gtcaattcga tttttgatgc gttgatgatg atcacgtagt cacctgtatc
     1441 aacgtgtggt gtgtaagtta ctttattttt accgcgtaag atagctgcta cttctgatga
     1501 taaacgacct aatgtttgcc cttcagcatc gacaacgtac catttgcgct caatgtttga
     1561 ttcatttgcc ataaatgttt gacgcataat tgagtcctcc tagtgaataa atgtttctat
     1621 agttttgggg tgattgtacg aaacaatcca gtgcgctatt tattccgtta gctgttgctc
     1681 tttcctgctt atatatcttg taacacaata agtttccggg gcttatcgtg gggtgatata
     1741 aaacaatacc gttaactatg atataggttt tagcgcataa agtcaatgtg tttcgttaaa
     1801 tttgtgttga ttttttagag tgaatttgaa tgtgatctcc aaagtccgct gttaactgct
     1861 ctgccgctaa ataaatcttc tccaaataca gtccttctgc gggtgctgta tgaggaacaa
     1921 gatttctatc ttgctgcgct aacaagttgg gaacatcgtc tgctgaacgt ttccctttgc
     1981 cgacttctaa tagatatgcc ataatgacac gcaccatatt gtacaaaaac cctgatcctg
     2041 taatcacgaa atcgataccg tctgcagtct gttcaatacg actttcatat atcgtacgtt
     2101 ctttgctttc aacttctgtt ttttgtgaac agaacgtcgt aaaattatgt gtaccgacaa
     2161 aatactgagc cgcacgttgc attgcttcaa tatccaatgc ttttggctcg aatgttttca
     2221 attgtgacca aaacgggttg cgatgttcag cttgataaat gctatagcga taacgtttcc
     2281 cgacacagtc atagcgacaa tgaaagtctt gatcaataaa agaaacgtca tgaacataaa
     2341 tatcatcagg caatgcacta ttcatcgcat gttgccagcg ttcgggcgta atgtttaaat
     2401 gcgtatcaaa atgaaaatat tgtgctttag catgtacacc acggtccgtt cgactggatg
     2461 gatgaatgcg tacatgttgc tgatgcatgc gttttaatat tttttcaaag tagccttgaa
     2521 ttgttcgccc ttgattttga atttgaaatc ctaaaaattg tgcaccgtta taactgattt
     2581 taacgaggac acgctgcata atatcgtcct ttctttaaaa agtatggcct aaccatagag
     2641 aaaccgctgc aataggaacg aggctgataa ttaataatgt gtctttcagc tgccatttta
     2701 aaatgcgata actcgttcgt tctgcattgg catcgtaacc tctcacttcc atcgcaatcg
     2761 caagttcttc tgcacgttga aacgcagaaa taaacaatgg aatgagtaat ggaataaatg
     2821 ctttaattct cgcagccaat gaacctgagc taatgtcaga gccccgtgat ttttgagata
     2881 aaatgatttt atccaattct tccattaatg tcggaataaa acgtaaggca atcgacatca
     2941 tcatacttaa tgctgccaca ggaattttaa tgtattttaa cggtttaaac agacgatcaa
     3001 atgcatctgt caaattgagc ggactcgtcg ttaatgtcaa aatcgttgag acaatcataa
     3061 tgaatccgag tcgaagcatg ataagtatcc cttctctaat cccgtttgaa tcaatagtaa
     3121 tgaagcccca ttcaatcaaa cgtgttccac ctttagtgag aaacagatgc atcataaagg
     3181 ttaaaattaa aaagaagaat accggtaaga gtcctttgat aagaaaccat aatggaatac
     3241 gtgcaagttt agtaactgtg agtaatataa gtgcaagcca caaataactt aaaggcgcgt
     3301 gactaaaaaa aataatgata ataaacaaaa atacaaaaat cagtttcgcg cgcgggtcca
     3361 atcgatgtat gacggtatcg agcggaagaa aacgtccaat aattagctta tccttcatga
     3421 cgttgcctcc attcttcata aatcgctaca aacgatgctt ctgttaatgc caacttgtcg
     3481 aactgtacgc ccaatttcgc ctcaacatca cgctgtaacc gcacaatgtc aggaaggcat
     3541 aagtgcaaag cattgacgtc atcagggcgt tggaaaaagt catacggcgt cgtggattct
     3601 attaaagttc caccttgcat gattttaatt tcatccgcaa attcagcgac atcgttcata
     3661 tcgtgtgtca ctaaaataat cgttttccct tcttccaact gtagtttctt aaacaacgcc
     3721 atcacttgag ctttacttcg tggatctaaa cccgctgtcg gttcgtctaa aattaaaata
     3781 tccgggtcca tcgctaatat ggcagcgagc gcaattttac gcatttgccc tcctgagagt
     3841 agaaacggag actgctgcat cactttttct gcatcaaaac cgagttcacc aagcaacgtc
     3901 attgctttgt cacgtgcctc ttctatgtca agcccataat tacgtggtcc gaacaatact
     3961 tccttttcga cagtttcctc aaataactgg gactccggaa attgaaaaac catacctatc
     4021 cgttgacgaa tcgatttcag atgtttatct ttcgtttttc ggttgacgat gacatctagc
     4081 acttgaacct tgccacgggt cggtttcact aaaccattga aatgttgaat caatgtggac
     4141 ttgccagacc ccgttttacc gataatcgca taataacatc caggtaaaaa ctctgttgag
     4201 atttgattta acgcttgata ttcataaggt gtattctttt gatacgtata ggaaacttct
     4261 tcaaatttaa tcatgtcaac cgctccaata atccttcata cgttataaac gattggctaa
     4321 gatttaactt ttgagccatg cgcatctcaa agggcaaatc caaaccaatt tctactaacg
     4381 cttcaccttt ctcaaaaatc ttttcaaccg ttccttctaa aaacacttcg ccgcgattca
     4441 tcacaatcac acgatctgac gacacgactt ctgaaaggtc atgtgtaatc gcaatgaccg
     4501 taacaccttt atgtcgattg agtgctttca ccatcgctag tatatcacgc ttaccttctg
     4561 ggtccaacat cgccgtcgct tcatctaaaa taatcaattg cggttctaaa gctaaaacac
     4621 tcgcaatcgc gacacgctgt ttttgaccac cagaaagcgc agtaggttca tgatgctgtt
     4681 tatcatacat atctacatct ttaaggacta aaggcacaat gtcatgcatc tcattgtagg
     4741 acaatccttt attctctaaa ccaaaagcca catcatagct tactgttgat cctacaaatt
     4801 gattttcagg attttgaaac acgatgccaa tatgatgttc aaaagctgaa cgatcgacac
     4861 ctttaatcga actgccgtta atacgaatat cgccttgata attttgttca atacctgtga
     4921 gcagtttcgc taatgttgat ttacccgaac cgttatgacc gacaatagat aaccattcac
     4981 ctttgttcac tttgaattgg atatcattta aaactttcgg ttgatcctca tgatattgaa
     5041 atgaaacgtg atcaaattct atcaagtgct cgtgttccat ttctagtgcc tcctttatgt
     5101 gctaatatga ctattttaca aaaaacaacg ccatttgtat atgtatcgga aatgtttgcc
     5161 tgcgattcaa tcccatcgta tgccattagc gtttctgact tgacttaacg cttatcgtcc
     5221 cattaaaaaa agggtatgag acaatcaacc atcatctcac acccttgtct attattgtca
     5281 gactgagaca catctaagtt ttcacagtct tgatcttctc atagtcttat tttcaatcaa
     5341 taatgataaa gcagtcaaaa aaatgaggac gattggaaca caaaagtttg acgtcccgac
     5401 ccatccaaca ttgacataaa aaagcgcgca ccccatctga attgagttca cgctttgtcg
     5461 tcaatattaa gttagatggg gtactctgag ctagacaata tttgtatgtg gcaaacatta
     5521 tcgttgcact catttgcttt catgtagtag tgtgtatcaa ttatactaat tcaatgatta
     5581 cttttaatgc gccatcgcct tgacgtggag caactttaag aatacgagtg taaccacctt
     5641 gacgctcttg gtaacgttca gcgatttcac cgaataattt ttgaagtgca gtttgagtcg
     5701 tttcatcttc gtttaagatt tgaacgttgc gtaatgtttt agcagcatta cgacgagaag
     5761 ctaagtcacc ttttttacct aaagtgatca atttttcaac tacgctacga agttctttcg
     5821 cacgtgcttc agtcgtttcg atgcgttcgc taacgattaa tgatgttgct aagtcacgta
     5881 acattgcttt acgttgatct gaagtacgac ctaattttct gtaacccatg agttaacctc
     5941 ctttatcaat cttcttttct tagacctaaa cctaagtctt ctaatttgta ttttacttct
     6001 tcaagagact tacgacctaa gttacgaact ttcatcatat cagcctctga tttgtcagcg
     6061 agttcttgta ctgagttaat acccgcacgt ttaagacagt tgtatgaacg tacagataag
     6121 tctaattctt caatagacat ttctaatact ttttcttttt gatcttcttc tttttcaatc
     6181 atgatttctg cattttgtgc ttcgtcagtt aagccaacaa agatgtttaa atgctcagtc
     6241 ataattttag cagctaaaga tactgactct tgcggtgtaa ttgagccatc agtccatacg
     6301 tctaatgtca atttgtcgaa gtcagaactt tgtcccacac gtgtattttc aactgtataa
     6361 ttcacacgct ctactggaga gtataatgaa tctactggaa tcacaccaat tggaagatca
     6421 cttgagttat tttgatcagc taatgcatac ccacgtcctg tattcgcaac taaacgtaac
     6481 ttaaggtgac cacctttaga cactgtcgca attttaagat cagggttcaa aatttcaaca
     6541 tcactgtcat gcatgatatc ttttgcagtg acttcgcctt cttctttaat atcgatttca
     6601 agtgttttat cctcttcaga ataaatctta agtgctaact ttttaatatt catcacaatt
     6661 gtagaaacat cttcaacgac atgatcaatt gcagagaatt cgtgtaacac accttcaatt
     6721 tcgatatact tcacagccgc acctggtaat gatgatagta ggatacgacg taaggagttt
     6781 cctagtgtag taccataacc acgctctaat ggttcaacaa cgaacttacc gaatttagca
     6841 tcatcactaa cttcaattgt ctcaattcta ggtttctcaa tttcaatcat ttacatatcc
     6901 tccttaagta cgtcgacttg cataaacttt aaattcaagt gatttgtgac aaaacgaaaa
     6961 tttaattata cgcgacgacg ttttggtgga cggcaaccat tatgtggaac tggagtaacg
     7021 tctttaatcg ctgttacttc taaacctgct gattgtaacg cacggatcgc tgactcacga
     7081 cctgggccag ggccttttac agttacttca actgatttta aaccatgctc catcgctgct
     7141 tttgaagctg tttcagaagc catttgtgct gcgaatggtg tagatttttt agaaccttta
     7201 aaaccaagcg cacctgcaga tgaccatgat aaagcattac cgaattcatc tgtaattgtt
     7261 acgattgtat tattgaatgt tgaacggata tgagccacac cgttttcaat attctttttc
     7321 actctacgtt tacgtgatac ttgtttacgt gccatagtat aatttgcctc ctttacctat
     7381 tattttttct tgttagctac agttttaact gggcctttac gtgtacgagc gttgttttta
     7441 gttttttgac cgttaactgg taaaccacga cggtggcgga taccacggta agatgagatt
     7501 tccatcaaac gtttgatgtt taagtttgtt tcacggcgta agtcaccttc aactttataa
     7561 ccgtctacaa cttcacgaat acgacctaac tcatcgtcag taaggtcttt aacacgtgta
     7621 tcttctgaaa cgtttgcttc tgaaaggatc ttttgtgctg atgttttacc gataccgtag
     7681 atataagtta atgagattac tacgcgttta tcacgtggga tatcaattcc tgcaatacgt
     7741 gccattataa tttacacctc tcttttaatt aaccttgttt ttgtttatgc ttagggtttt
     7801 cacagattac catgacttta cctttacgtt taatgacttt acatttttcg caaataggtt
     7861 ttactgatgg tcttactttc atttttatac ctccttcaat gttggagtga caattattta
     7921 taacgatatg tgattcttcc gcgtgttaaa tcatacggag acatttctac tgttactttg
     7981 tcgccaggta gaatacggat atagttcatt cgaattttac cactcacatg tgctagaatt
     8041 tcatgaccat tttctaattc tactttaaac attgcatttg gtaaagtatc taatactgta
     8101 ccttcaagtt cgataacgtc ttgttttgcc atttggaata acgcctccct tttgttgtaa
     8161 ggatatagaa tatttattca tgaacggtct actttagtta tactcacttt tacacaatcg
     8221 ttataaagcc ttgtcaccat aaaaatcaat ttatgctatc aaagttaacg actgattcaa
     8281 aatgatctca ccaagccgtt atgatttaag tgactctaaa atttcaatca catctgatgt
     8341 aacttcatca atgtgttttg acccgtcgat gtttttcaaa agaccttttt gattgtaaaa
     8401 ctctaaaata ggtttagatt gctttacatt cacttctaaa cggttcgcaa cagtttcagg
     8461 gttgtcgtct tcacgttgat aaagcttacc accatcaata tcacaaatac cttcaacttt
     8521 tggaggattg aaaacaagat gatatgttgt gccacaagtc tcgcaaatac gacgacctgt
     8581 tagacgattc atgagttctt cttctggcac ctcgatattc acaactgcat caatcgttct
     8641 tccaagttct tctaggattg aatttaatgc ttctgcttgc tcaatcgtac gaggaaatcc
     8701 gtctaataag aaaccttttt ttgcatcgtc ttcagagata cgttctttta caatcccaac
     8761 tgtaacctcg tctggtacaa gttcaccacg atccatatag gatttcgctt ctttacctag
     8821 ttcagtttca tctttaatcg cttttctgaa catatccccc gttgaaatgt gaggaatagg
     8881 gtacttttta atgatttcac tcgcttgagt tcctttacca gcaccaggca atcccattaa
     8941 gataatgttc ataagtgccc tcctacaaat tatcgtctac caaagccttt atattctttt
     9001 tcattcactt gagcttctaa acttttcatt gtttcaatgg caacaccgat aacgatgagt
     9061 aagcttgtac cacccaattg aattgcttgt ggtaagttca taaatttagt tgcgataatt
     9121 ggtaaaatcg caatgaccgc taagaaaatt gaacctacaa acgttaagcg atataagact
     9181 ttagtgatat attttttcgt ttgttcacca ggacgaatcc ctggaacgta actgccttgc
     9241 ttcttaagat tttctgccat cttttcaggg ttgacttgaa caaatgcata gaaataagta
     9301 aatgcaataa tcaagacaac ataaactacc atacccatat tatgagatgg gtcagcgtaa
     9361 tttcctagct tttgtgccca gtcggcatcc gggaagaaca atgataatgt tctcggtaat
     9421 aaaaagaatg ccattgaaaa gatgactgga atcacaccag ctgagttaac ttttaatggt
     9481 aagtatgttg cttgtgaacc aagacgcata tgagattgtt tctttgcata ttgaataggt
     9541 attttacgaa tcgcttgtaa tacatatacc gcgccgacag ttaataaaat cataccgaca
     9601 acgagtccag cgactttcaa ccaagcgaat gtaacatcat cttgtccgat aaactcctgt
     9661 tggtaaaatt gcatgagtcc agacggtaat gtagataaaa tacctgcaaa gatgataata
     9721 gaaataccat taccaacacc atattgcgta atctgttcac ctaaccacat taaaaatgca
     9781 gttcctgacg taagtactat tgcaattaac aaatacgacc aaacattttg ttctttgata
     9841 agtgccccgt ccaaataatt attgaattgg aacgacatac caatcgattg aataaatgct
     9901 aaaacaattg tgaaataacg tgtgaagttg tttaacttct tacgaccagt ttcaccttgc
     9961 tttgcccatt cagtaaactt aggtacaata tccatttgca atagttgcat aacaattgaa
    10021 gcagtgatgt agggcatgat tcccatagca aaaatggaaa agttcttcaa ggctccgcca
    10081 ccaaacgtgt ttaacaagtc agtgacgcct tgagaacctt gtcgattatc aaatgctgct
    10141 ggattaacac caggtgctgg gatatacgta cctattttga aaatgactaa cattgcaaga
    10201 gtaaaaagta tcttgttacg aacttctttt gttttaaaaa agttcacaag cgtgtgaaac
    10261 attagatcac ctcttgtgct ccgcctttcg cttcaatagc ggctttagct gaagctgaga
    10321 atttgtgtgc tttaacagtt aatttctttt ctaatgaacc attacctaaa actttaatgc
    10381 cagctttttc attcttaact acgcctgttt cgattaataa ctcaggtgtt acctcagtac
    10441 catcttcaaa ttgattaagt tggtccaagt taacgatagc gtattcttta cggttgatgt
    10501 ttgtgaaacc acgttttgga atacgacgga ataatggtaa ttgaccacct tcgaaacctg
    10561 gtcttacgcc accacctgaa cgtgcttttt gacctttttg accacgacca cttgttttac
    10621 cgttaccagt acctgcacca cggccgacac ggttacgtaa tttacgtgat ccttctgatg
    10681 gttttaattc atgtaatttc attttggcac ctccttaatt atttttcttc tactgatact
    10741 aagtgactta ctttgttaat ttgtccacga attgctgcgt tgtcttcaac tgtaacagat
    10801 gaattgacct tacctaggcc aagtgcttta actgttttac gttgtgtttc tggacgccca
    10861 ataacgcttt tagtgagggt gatttgtaat ttagccattt atctgtttcc ctccttaatt
    10921 gtataattct tctactgttt tgccgcgtaa acgcgcaaca tcttcagcat tttttaagtt
    10981 tttcaaacca ttgattgtcg cacgaaccat gttgattggt gtatttgaac ctaatgattt
    11041 acttaagata tcagtgatac ctgcaagctc taatacggca cgaactggtc cacctgcgat
    11101 aacacctgta ccaggtgctg ctggtttcat taaaacactt cctgaaccga aacgtccagt
    11161 gattgtgtgt ggtgtagtac cgtcaacacg agtaactgta attaaatctt ttttcgcagc
    11221 ttctactgct tttttgattg cctcaggtac ctcttgtgct ttaccagtac cgaatccaac
    11281 gcgaccattt ttgtcaccta ctactacaag tgcagtaaaa cggaaacgac gtccaccttt
    11341 tacaacttta gcaacacggt taatcgtaac aacgcgttct tcaaattctt taacttcttc
    11401 ttctctacga gccatttata ttgtccctcc ttttagatta aaattgaagt ccattttcgc
    11461 gagctgcatc tgctagtgct ttcacacgtc cgtggaataa gtatcctcca cgatcgaata
    11521 caactgcttc gatgcctttt tcatttgctt tcttagcaat tacttcgccg actttagatg
    11581 ccatttcaac ttttgttgta gaagcatcta cttcgctatc tttagttgaa gcttgaacta
    11641 aagtaacgcc tttagtatcg tcgatgattt gtgcatagat gtgtttgttt gaacgatata
    11701 cgtttagacg tggcttttcg ctagtacctg acaatttcgt acgaacacgt gcatgtcttt
    11761 ttaaacgtac tttattttta tcaattttgc tgatcatgtc aatactcctt tcttattaga
    11821 gtgatttatt atttaccagt tttaccttct ttacgacgta catattcacc ttggtaacgg
    11881 atacctttac ctttgtaagg ctctggagga cgaacgtcac gaatttttga tgctgttgca
    11941 cctactaatt ctttgtcgat tccttcaact ttaactgtcg tatttttttc tactgagaaa
    12001 gtgattcctt cagcagcttc aaattcaact gggtgagagt aacctacgtt taatacaagt
    12061 ttgctacctt gaacttgtgc acggtaacca acaccgataa gttcaagtgt tttttcgtat
    12121 cctttagata caccttgtac catgttattg attaacgcac gagttgtacc atgaattgtt
    12181 ctatgttctt tagaatctga tggtctaaca acttcaagtg tgttttcatc ttgtttgtaa
    12241 gtcatttctt catttaaagt ttgtgataat tcacctttag gcccttttac tgaaactgta
    12301 tttccttcga tcgttacagt gacatcgcta gggatttcga taattttttt accaacacgg
    12361 ctcatgttct ggcacctcct tatttattta atattaccaa atgtaagcta atacttctcc
    12421 gcctacgtta cgttttctag cttctttatc agtgattaca ccttcagaag ttgaaactaa
    12481 tgcaatacct aaaccgttta atactttagg cacttcgttt gctttagcat aaacacgtaa
    12541 accaggtttt gaaatacgtt taagaccagt aataacacgt tcgttatttg aaccatattt
    12601 taagaataaa cggataacac cttgtttatc atcttcgata tattctacat ttttgatgaa
    12661 accttcattt ttaaggattt cagcaatttc ttttttaatg tttgatgcag gtaattctaa
    12721 tttttcgtga cgcaccatgt ttgcgtttct tacacgagta agcatatctg caattggatc
    12781 tgacaatgtc atagttgttg cctcctttca agagttaaat ttttaccagc tagctttacg
    12841 tacgccagga atttgacctt tgtaagctaa ttcacggaaa caaatacggc aaagtttaaa
    12901 tttacgatat acagaatgtg gacgaccaca acgatcgcaa cgtgtatatt cacggacttg
    12961 gaatttttgt ttacgttgtt gcttaacaac cattgatttt ttagccatct aattcgcctc
    13021 ctttagagat tatttttgaa acggcatacc gaattgagtt aataattcac gcgcttcttc
    13081 atctgtgtta gcagtagtaa cgataacgat atccatacca cgtacttttg atactttatc
    13141 atagtcaatc tcagggaaga ttaattgttc tttaacacct aatgtgtagt taccgcgacc
    13201 gtcgaatgca tttttagata caccgcggaa gtcacgtaca cgtggtaatg aaactgagat
    13261 taatttatct aagaattcat acattctttc gccacgtaat gttactttag caccaattgg
    13321 cataccttca cgtaaacgga atgtcgcaac tgattttttc gctttagtga ttaatggttt
    13381 ttgaccagtg attgcagtta attcttcaac ggcgttatct aatacttttg agttttgtac
    13441 tgcgtcacct acacccatgt tcacaacaat tttatcgatt ctaggtactt ccattactga
    13501 gctgtagtta aactttttaa ctaagttttg tgtaacttct gaattaaatt tttcttttaa
    13561 acggttcaaa gtggatcctc ctttcaacta gatattaatt agacttaatt tcttcgcctg
    13621 attttttagc gattcttact tttttaccat caacaaattt gtagcctaca cgtgtaggtt
    13681 cgtttgtttt agggtctaat atttgtacgt tagaaacatg aattgctgct tcagtttcta
    13741 agattccacc ttcaggattc atttgagttg gtttttggtg ttttttaacg atgttcacac
    13801 cttccacaac gacgcggtct tttttaggtt gagttgctac aactttacct gttttacctt
    13861 tgtctttacc tgcgataacg attacgttgt cacctttttt gatatgcatg tgggcacctc
    13921 cttggaattt attatttatg atttacgatc gattatagta cttctggtgc taaggaaacg
    13981 attttcataa agtttccttc acgtaattca cgtgctactg gtccgaagat acgtgtacca
    14041 cgtggtcctt tgtcatcacg aatgataaca catgcatttt catcaaattt gatgtaagaa
    14101 ccgtctttac gacgtacacc tgatttcgta cgtacaacga cagccttaac aacatcgcct
    14161 ttcttaacaa cgcctccagg tgtagcattt ttaacagttg ctacgatgac gtcaccgatg
    14221 ttagcagttt tgcggccaga tccacctaat actttgattg taagtacttc acgagcacca
    14281 gagttgtctg ctacttttaa acgtgtttct tgttggatca tgattaaacc tcccttatct
    14341 ttatagtcat taaatgatta ctgattcttc gacgatttct actaaacgga aacgttttgt
    14401 cgctgataaa ggacgagttt cttgaatttt aacgatatct ccgaatttag ctgaattgtt
    14461 ttcgtcatgt gctttatact ttttagagta ttttacacgc ttgccatata gtttgtgcgt
    14521 tttgtatgtt tcaactaaaa cagtcactgt tttgtccatt ttgtctgaaa caactttacc
    14581 aacgtaaact ttacgatcat ttctttcgct cactttagta acctcctctt tcaatcaatt
    14641 attgatttgc tttaccttgt tctaattctc tttcacgtgc aacagttttt agacgtgcaa
    14701 ttgtttttct tactgtttta attcttgcag tctcttctaa ttgacctgta gctaattgaa
    14761 agcgtaggtt aaaaagctct tcttttgaag atttgatttg ctcttcgatt tctgaagtgg
    14821 ttaagtctct aatttcctta gctttcattt gtttcaccac ccaattcttc acgttttaca
    14881 aacttcgttt taactggaag tttgtgactc gctaaacgta atgcttcacg cgcaacttct
    14941 tcagatacgc cagcaacttc aaataaaata cgacctggtt taacaactgc gatccagcct
    15001 tcaaccgcac ctttaccagc acccatacgt acttctaaag gtttttgtgt gtatggtgtg
    15061 tgagggaaga ttttaatcca aactttcccg ccacgtttca tgtaacgtgt catagcaata
    15121 cgagctgatt cgatttgacg agaagtaatc caagatgttg ttgtagcttg aataccatac
    15181 tcaccaaatg ttacaaagtt accgcctttt gaacgacctt ttgtatcagg acgatgttga
    15241 cgacgatatt ttacacgctt tggtagtaac ataattattt tcctccttca ctatttttct
    15301 tagtaggaag aacttcacca cgatagatcc acactttaac acctaactta ccataagttg
    15361 tgtcagcttc tgcatgtgca taatcgatgt ctgcacgtaa agtatgaagt ggtacagttc
    15421 cttctgaata ttgttcagca cgcgcgatgt ctgcaccgcc taaacgacct gaaacttgtg
    15481 ttttgatacc tttagcacct aatttcattg ctctaccgat cgcttgtttt tgaacacgac
    15541 ggaatgaagc acgattttct aattgacgtg caatgttttc agcaactaaa cgtgcatcaa
    15601 ggtcaacttt cttgatttca actacgttaa tgtgaacttt tttgtcagta agttgattta
    15661 atttgttgcg aagtttttcg atttctgaac cgcctttacc aattaccata cctggtttac
    15721 cagtgtgaat agcaatgttg atgcggttag cagcacgctc aatctcaacg tgagatactg
    15781 atgcgtcttt caatgcttta tcaataaatt tacgaatttt taagtcttca tgtaaaagtg
    15841 atgcgaaatc tttttcagcg taccatttcg cgtcccagtc acggattaca ccaacacgaa
    15901 gtccgattgg attaattttt tgacccacgg tattccctcc ttaaaatttg attaagcttc
    15961 ttgagcttcc tcttgtccat cacttactac gatagtgata tgacttgttc ttttgttaat
    16021 tgcgcttgca cgtccttgtg cacgtggacg gaaacgtttc aatgttggtc cttcgttagc
    16081 gtatgcttct ttaacaacta attgatcagt gttcatacca tagttgtgct ctgcattagc
    16141 taaagcggac attaataatt tttctactac tggagaagaa gctttatttg ttaatttcaa
    16201 aatagctact gcttctctta cgtctttacc tcgaatgaga tccaatacta atcgaacttt
    16261 acgaggtgcg attctgatag ttctagcaac cgcttttgct tccattcgta tttcctcctc
    16321 tacttactag aaatggtatt atcttcttgt tttcttgtcg tctgcagcat gtcctttgaa
    16381 agtacgtgtt ggagcaaatt cacctaattt gtgtccaacc atatcttcag ttacatatac
    16441 aggtacatgt ttacgtccgt catatactgc gaatgtgtgt ccaataaagt ttgggaaaat
    16501 cgttgaacga cgtgaccatg ttttaattac ttgctttttc tcgctatcgc cttgagcctc
    16561 aacctttttc attaagtgat catcgacgaa aggtcccttt ttaatactac gagccatatt
    16621 ggcgcctcct ttcttattat gtgcgtgcag cgattacgcc gcacacccaa ataagctatt
    16681 tttattttct cttgcgtcca cgtacgataa gtttatctga acgtttttta ccacgacgag
    16741 ttttcttacc aagcgttggt ttaccccatg gtgacattgg agatggacgt ccgattggcg
    16801 cacgaccttc accaccaccg tgtgggtgat cattagggtt cattacagaa ccacggactg
    16861 ttgggcgttt acctaaccat ctagatttac ccgctttacc aatgttaaca agttcgtgtt
    16921 gtaagttacc aacttgacca atagtagcac ggcaagttga aagaatcata cgtacttcac
    16981 cagaacgaag tcttacaagt acatatttac cttctttacc taatacttgc gcgctagcac
    17041 ctgctgaacg tgcaagctgt ccgccacgac caggttttaa ttcgatattg tggataactg
    17101 aacctacagg aatgtctttt aatggaagtg cgtttccgac tttaatgtct gcctcagaac
    17161 cactttcaat gatttgacct acttctaagc ctttaggtgc aatgatgtag cgtttttcac
    17221 catctgcata tacgattaat gcaatgtttg ctgatctgtt tggatcatat tggattgaat
    17281 ccactttacc aggaattcca tctttattac gtttgaaatc aataacacgg tattgacgtt
    17341 tgtgtccgcc accatgatga cgtacagtca atttaccttg gttattacga cccgcttttt
    17401 tcggtagcgg ttgtaataat gacttttcag gctcagattt tgtgatctca gcaaaatcta
    17461 atgtagtcat attacgacga ccatttgtaa ttggcttgta atgtttaaga gccattgtcg
    17521 cttacctcct tattggtatt tagtttttag ttaaataagt cgatttgacc ttcttttaat
    17581 gtcacaatcg ctttacgacg tttgtttgta tagccttgat aacggcccat acgttttttc
    17641 tttggtttat agttgataat gttgacatta gcaactttta cttcaaagat ttcttctact
    17701 gcttttttca cttctgtttt gttagcacgt acgtctacat caaaagtgta tttatcttca
    17761 gccatagctg cagatgattt ctcagtgatt acggggcgct ttagaatgtc tctagcttcc
    17821 attatccgag cacctcctca acttttttag ctgcttcttg agtgattaat acgctgtctg
    17881 cgtgagttaa ctctaatacg tttaaacctt ctggtgttgt gattgttaca cctggaatgt
    17941 tacgtgctga taattcaaca tttacatctt ccccaactgt tacaactaac acttttttag
    18001 gtaattctaa gtttgttaaa gttgttttga attcttttgt ttttggtgct tctaagttaa
    18061 aactatcaac aattttgaat ccattttctt gtactttgta agaaagtgca gaacgtaatg
    18121 ctaaacgacg cattttctta ggcattttgt agccatagct tcttggtgtt ggaccgaata
    18181 cgataccacc accacgccat tgtggcgcac ggattgtacc ttgacgcgca cgtcctgtac
    18241 ctttttgtct ccatggttta cgtccaccgc cacgaacagc tgaacggttt tttaccgcgt
    18301 gtgtaccttg gcgtaatgaa gcacgttgta agttaattgc ttcgaataaa acatcattat
    18361 ttggttcaat cccgaatact gagtcgctaa gttctactgt accagctttt gaaccgtcaa
    18421 ctttatatac atcataattt gccattatgc atttcctcct ttcgctacta gttatttgtt
    18481 agctttgatt gctgattgga tttgtacaaa acctttttta ggtccaggta cattaccttt
    18541 aactaaaatt acgttgtttt ccgtatcaac ttgaacaact tctaagtttt gaacagttac
    18601 tgtattacca cccatacgac ctggtaattt ttgccctttg aatacgcgtg atgcatctga
    18661 tgccatcccg atagaacctg gtgctctgtg gaaatgagaa ccatgagaca taggtccacg
    18721 tgattggtta tgacgtttga ttgcaccttg gaaaccttta ccttttgaag ttcctgttac
    18781 gtcaataatg tcgccaactt caaatgtatc tactgagact tcttgaccta cttcgtaatc
    18841 atcaacatta acgtttctga attcacgaat gaagcgctta ggtgctgcgt cagccttttt
    18901 agcatgacct tcagctgctt tagtcgcata tttattagtt tttctacctt ttttgtatgc
    18961 ttctttgttt tcaaaaccaa tttggattgc gttgtaaccg tcaacctcta cagttttctt
    19021 ttgtaatact acgttttctt tagcttctac tactgtaact gggattaatt caccgttctc
    19081 accgaacact tgagtcatcc cgatttttct tcctaagatt cctttggtca tcgaaagtcc
    19141 acctcctaaa attttctatt ataatttaat ttcgatgtct acacctgatg gtaagtttaa
    19201 gcccataagc gcgtcaactg tttttggcgt aggatttaca atgtcgatta aacgtttatg
    19261 tgtacgttgt tcgaattgct cacgagaatc tttgtactta tgaaccgcac gaatgattgt
    19321 gtaaactgct ttttcagttg gtaatggaat tggaccagaa acatccgctc cagaacgttt
    19381 tgcagtttca acaatttttt ctgctgattg atcgataaca cggtgatcat aagcttttaa
    19441 tctaattctg attttttgtt ttgccatgat ttaccctcct tattcgtctt cattaaagtg
    19501 atagacttct ccacgaaaac tatctcacac aacgccatgg caaagcggcc gggtgtgtca
    19561 gtaacctttc gcttcatcgc attaaaagtc caacattaga catgatacat gaaatgtgtt
    19621 cacttcgcaa ctatttatac aaagtttttt atgtctaatt cacatacctc atcattttac
    19681 ttgatatatg ctttaagttc aatagcttag agagattttt tcaaatttaa tcttacattt
    19741 tgtttcttat catttaaaca attataataa tggtaaatct tttttccatt gtgatatgat
    19801 aatccgacaa aatgttgagg cactgcatta aaactttcta tattatatag tgtagaatag
    19861 ttacaatgta tccccacatc gcaagcgtcg ttttaggcgt ttgattaaat cattaaggag
    19921 ttgcttattt tgacgagaaa ttctaaaaca gctttagtta tactatctat cattgcactt
    19981 gtttctgagt tcattactgg ctttcccctt ctaggtggtt ggtatgttct tgcactaggt
    20041 tggcagccac tcgcatttaa tgcatttatc tatttaatta tggtgcttat ctttattttc
    20101 aatcgccaaa atacgattcg tcctatgcta cttatcccag ctggcggtat cattgcaagt
    20161 gcccttgcgg tgattccttt tgtaggtatg attttgcatt ggattatgtt cgtattaatg
    20221 atcttcttac tgattgtatt attcgtaacc cctgtttatc ttaaagcttc atatacgcgt
    20281 tatacgcatt ctgaacgtga tcataaacgt tattaaatta tttcatgggg attgaaaaaa
    20341 tattgatgct attgttgcag cagtttgttt aacttgttct caatgatttc tgactttgat
    20401 tacgttttcg tcttcgcttt ccgggggact ggcccttcaa ttcaattctg cttgattgaa
    20461 gcacacatga gatggaagtc gaatgagatt ttgggagcag tacagaaatc tcctgtgtca
    20521 caaagatttc attttactgc ccccgcaatg atgactagac ttcacaaaag agagcgtatt
    20581 gagaagccaa accactactg cgataaactg taaccacttt taaagtaaag aagtaactgc
    20641 tagcagtata cagtcattcc cacagacgac tcagccttct gggcaatcat acagtaatca
    20701 ttttgagggc aagttaataa aagcaagaaa acgatagtat cattttttaa tatcccatta
    20761 cccctcattt ggctaccgtt taaaatcatt attgaatcat aaatctatga atggattgat
    20821 gaataaattt ttctatgccc caccctttgt gtccttttgg ctgatccatc ccaatcgcct
    20881 ttaacaatcg agtaggagaa taaccgttat cctactattc gtcctctcac acggttactt
    20941 actcgacggt tcaatatctt gcctaagccc attaagaatg agttgtctaa ttcgtcggtt
    21001 taaccaagat tgtgtggttt caataaattc tctgataaaa cctctgccaa agtattttat
    21061 ccaacctcgc gtcacttggt taattttagt gataatgtct ttaaatgttc caggtctatt
    21121 tcgttttgtt atttccctta aggtgcgtat taaatttctt tttgcttccg tggtcggtct
    21181 aaaacgacaa tccccattac cttggttatt agacaactca agaactttaa gcgtgtgact
    21241 gctcctactt tacttttctc ttccaagcag ttttttcgtt atctgtgaaa agtactgcaa
    21301 aaagtggaca aaaagttcac tgactttcat actgtcaatt ccaagagcgc ctttattttt
    21361 cttaaccttc ttgatagcat tttctatatt ttcaggtctt acaacaagct ccatcagtga
    21421 tgcagattca tccattctac atagccttag tatgatgttt ctgttcgtcg gtgcgagtgt
    21481 ttgcgtccga cttccttcag atttcacttc gcaatggact cccttgtttt tcgctaacag
    21541 ttcctactac gaagcctgta atggactttc accgtcaaga tgttacccat ttcgagcgca
    21601 ccctaaaaaa gcccgaatag tgcatgacac actactcgag cttcattaaa gtgattttaa
    21661 ccatgtacaa atgcgaaata taaaataaag attaccatta aaccatacat aattggatgt
    21721 acttctttat gacgttttgt taagaccatt gtaattggat aaaaaataaa gccacatgca
    21781 atccctgttg caattgaata tgaaagtggc atcataataa tcgtaataaa tgctggtact
    21841 gccacttcaa aacgtttcca gctgatttcc gctaaattcg aagccattaa tacgccaaca
    21901 acgactagtg caggtgtcgt tactgctggc gtaaccactg ccattaacgg attgaagaat
    21961 aatgcgagca agaaacagac ccctgttaca atactagcaa aacctgtacg tgcgccaact
    22021 gccacacctg aagttgattc aatgtaagac gtcgtcgttg ttgtaccgaa gactgccccc
    22081 accattgttg ctaatgagtc tgagaacaac gcacgtcctg cacgtggtaa tttgttgtct
    22141 ttcatcatgc ccgcttgaga tgcaaccgca acgattgtcc ctgctgtgtc aaagaagtcg
    22201 atgaatagaa atgttaaaat gacaattaaa aactgaatcg taaacagttg tgacggatct
    22261 tggagtgatt caaacgctgc cccaaatgtc ggtgcgatac ttggcacttt acctataatc
    22321 gcgtttggcg gtgcaatttg ttgcgtcaat aaaccaacga ttgatgtcgc aaccatccca
    22381 ataaagatag cacccggaat tttcttcgcg tataacacaa ctgtaatgat aataccgaac
    22441 actgctaata atacaccggg atctgtaatt ttccctaaag ttacaagtgt cgcttcttca
    22501 tttttaataa ttcctgaacc ttgtaagccg acaaaggtga taaataaacc tatccccgct
    22561 gaaacggcca ttttcatttc aaatggaatc gcgttaataa tggtttccct caaaccggta
    22621 actgttaata tcgagaagat taatcctgag aaaaagaccc ctgttaagcc ggtttgccac
    22681 ggaatcccca tcgttaatac gactgtaaat gcgaaaaatg cattcaaccc catacctggt
    22741 gcgagtgcaa taggatattt cgctatcaag cccataaata aacagccgac aaatgcagca
    22801 agtgctgtcg caacgaacac ggcaccttgg tccattttaa gtgcatcagg taccccttca
    22861 acacctgcaa gactcaatat ttgtggattg acagctaaaa tgtatgccat cgacagaaac
    22921 gttgttaagc cacctaaaat ttcgcgacga taactcgttt ggttttcgtc aaatcggaaa
    22981 tattttttca ctttaatttt ctcctttaaa tgaaatactc caatagtcta atacgattac
    23041 gggtgaattt caacaatttt tccgaacttt gtatacgaaa aactatattt cgttcgatat
    23101 ttataagcat cttacaagtt taatcctttt aatgcatctt taaatggatt gttctccaac
    23161 tcgtcttctt tcatatattt cttcatttct cgcttcgaca ctttgtcttt acctttattt
    23221 ttaaagcgtt gatccatatg ttcttgcgtt tcggtataac cacagacaca gcgatacgtc
    23281 gcttttttac ctgtaccgaa tttcgtcaat cgtttcttac attgtgggca tctcgcattc
    23341 gttttcgttt ttacatcttt cttcgtttta catgatggat cttgacaaac gagcatcgag
    23401 ccatttttcg tattcactct taacataaat ttgccacacg ttggacattg ggcagatgtt
    23461 aagttatcat gtttgtattt ttgctcactc gatttaatcg tatgaataat ctcatgcgta
    23521 aactgtttca tttcttgcat aaattggtgt gctttgtact gccctttttc aattttcatc
    23581 aatttatctt cccattcagc cgtgagacgt ggtgaagtta atgcaggtgg cgcgaggtct
    23641 aaaatttgtt ttcctttaga agtgacttta attttaccgt catgactttc gatcgcattc
    23701 acattaaaca acttatcgat aatgtctgca cgtgtcgcaa ccgtaccaat cccgcctgtt
    23761 gattttagcg tttgtgcgga ctttttatct tttaagtcga aaaacttatc aggtctttcc
    23821 atcgctttaa gtaatgtacc ttcattaaaa tacgcaggtg gtgtcgtttc atgtgccaca
    23881 atctgtagtt gtcctacttt gaatgtctca ccttgtttaa atgacactgc tcgttctgtt
    23941 tgcgcgcggt cttgttgtaa ctttttaaaa cctaactcta tcggaacttg tgattggtat
    24001 atgaatacat gtttaccgat gttcacttca acatgttgtg cacgataacg atatggtggc
    24061 atcaacactt ctaaatagcg ctgtgcaatc atcgtataaa ttttctgctc attcggtgat
    24121 aatgacgcaa cgttcgcacg cacttctgtc ggaataatcg catggtgatc cgaaactttt
    24181 tgattgttca caaatgataa ttttttcgct aatggttgct ttaaaatctc gcgcgcatac
    24241 ggcatcaact ccgtccccat cgttgcttgt acacgttctt tcaatgtgtc caccatatct
    24301 gtcgtcaaat aattcgaatc tgtacgtgga taggtcacta atttatgtcg ttcgtacaat
    24361 tgttgtaacg tatttaaggt ttgcttagca cctaaatgat atttttgata agccgcttgt
    24421 tgtaaatcag ttaaattaaa taacggttgc ggataaactt ttttctcttt ttcatgcaca
    24481 ctgttgactt gtgcttgctt attttgcaac gtattcacaa tggcctctaa cttttctttc
    24541 tgataaacgc gtccgtcatg ttgataggtc attgtcacgc catttacttc tgcttctaaa
    24601 gtataatact gttgcggttt gaaattttta atctgttctt ggcgcattgc tacaagttga
    24661 atcgttggtg tttgtacacg tccaagtgat aattgcgcat catatttcgt cgtcaatgct
    24721 cgtgtggcgt taatcccgac aatccagtcc gcttcacttc tcgctaacgc agcttcgtat
    24781 aaatgttgat acgcacgccc atcttttagc tttttgaaac cttctttaat tgctttcggt
    24841 gtgacggagc tgatccataa tcgtttaatc ggctttttca catgcgcttt ttcaataatc
    24901 aaacgtgcaa ccagttctcc ttctcgtcca gcatccgttg caataatcaa ctctttgacg
    24961 tcactgcgct tcattaaatt ctgaattgta ttaaattgct tccgtgtctt actgattacg
    25021 acggatttca tttgtttcgg tataattggc aaatcctcta acacccattg ttgatacttt
    25081 ttatcgtatt gttcaggtgt tgcattcgtc actagatgcc cgagcgccca tgtgacgata
    25141 tattggtggt tttcaaaata accttctttg cgtgacccta catttaaagc attggcaata
    25201 tcacgcccca ctgatggctt ttctgctaat atcagtgctt tactcatgat tcattcctcc
    25261 atatttcatt ccaattattt atcaaaaaac aactctttaa atcccagttg aatgcttcac
    25321 aagttgcttt catttcatat caaaaaaact tataattaag ctaagtatat cattaaggag
    25381 gcgcatgatg aagatatctc aagttactcc caatccaact attgcgtcat ttattcaaac
    25441 gtatgtgtca gaacgtcctt cctatacgaa taagttgcca ttagatgatg aacaagcact
    25501 ctttacattt ttagaagaag ctgcagatga aacagggcta tttatcgttg aagaagccga
    25561 cgaaattcaa atgctgttac tctgtatttc ttattctgaa gaccgttata aagtgattgg
    25621 tccgattgta aaaaacggtt atgaaccaac gaaagagacg ttcaaacaac tgttcgatgc
    25681 tatcacagca caacattacc aaccatcgac atattatttt gcatttacag ctcaacacgc
    25741 actgattaaa acgtttatga aaactattgg cgcatcgtac acatttacag attatcacct
    25801 ggaaacaagt caagatttgg gcgaaacaca aaacttacat catatgattc cctatagtaa
    25861 agcgtattat cgctattttc aacggttaca cgaagataca tttacgcaca atgcgatgac
    25921 tgcaaatgaa attgtgacat cactagacga tcaacatgaa cttgttttgt atatggcaga
    25981 gggtatttta aaagggtact tgtacttaat atatgatgag tcagagcgtc atgcagagat
    26041 taagtatttc tcaagccatg cagactatcg cttaaagggt attgcgttcg acttaattca
    26101 gcatgcaatt caccgtgcgt taacgagacc tgaaatcgaa cgtgtctatt ttaaaatccg
    26161 tagcaaaaat cacaaactgg tcgaacgttt tcatgagctc ggctttaaca tctcatctga
    26221 atatcagaag tttaaaattt ataaatagtc gtcgggcatg tatcgacagg ttcgaacaat
    26281 ggtggcgatg aagaaagagg cagggacact gatttcccaa gcctcttttt tatacgaacc
    26341 aaaattgata caaatataaa atcactatac tgattacaat cgtaacgtta ctcgccatcg
    26401 caatcaccgg taacgtccga tatttaaact gaaccgcata tgacagtgct gcaaccccaa
    26461 caggtaacaa ccaaatgagc tgtaatgtcg ttttgatcat cgcatcatct acgggtaaga
    26521 agaaatagac gagcgttccg aatagtgcac caaaaccata atgtaacacg agatatttaa
    26581 gtgttaacgg caaaaagcga cgttctaatc taaagtccat taaaacacca agtaaaatca
    26641 tcgaaagtgg taagttggca tggcctaaaa tgtcgaagaa acgaattgct gtgtggggta
    26701 aatgccattg aagaatattg agtactaaca tgataatata tgtcatcaac ggaacagatt
    26761 tcaacatgtt ccataagatt tgcttaggat taaaaccgcc acctacttgt ttgaaataac
    26821 tcgcagcgaa atacgtgagg ccaaacatca cgattgcccc accgatatcg gccatcccaa
    26881 aatacaacaa cccttgctca ggccaaattt gttggactaa cggatatgca aaaataccaa
    26941 tgttgagtgc tgccatcatc attgcgacag ttccccgcac ttcattacta tattttatga
    27001 acatgagtac aataagcact tttgtcacaa caccatataa aatcatcatc acaggtaata
    27061 cgacgagtga tggcgtcaaa ttaacatgat ttaaattgac gataacgaca gacggcaagc
    27121 tcacattgag cactaacgtc gaaatcacgc gactgtcctt cccattaata taaccgatgc
    27181 gctttaggat gtaccctagt gcaattaata ataatatcat caaaaaattc tctgtcatga
    27241 tacatccccc tttgaaacaa cttgctttta tattactgta aaacgtttta attaagcaat
    27301 gttaacgtgc tataatgaaa aggattgata taaggaggtg ccctatggat ttagaacagc
    27361 aattacaaga gcttaaaatg gactacgtac gattacaagg tgatttggaa aaacgcgagt
    27421 ccacatctca acaagtcgat ccactgattc aacaacttga acaaattgaa caacaaattg
    27481 ctgaagtacg taggcaactt cgagaaaatc tttaaaagga gccattcaac tctaacttaa
    27541 tcaacatttg acttcactag caagatatag aaaggatgta cttcatgtta gcttacttaa
    27601 tcttattacc cctcatgtat ttggttgttg cctatattag catttttaaa atgcgtatta
    27661 tgatgccgaa gttattaaga gtaattatgg ggctattact catcattgtc gttgcgactt
    27721 cactcgtcta ttatcctgca tcaacctggt gggtatttgt tgtcttaatt ttattaatcg
    27781 gtaatgttga aattacagca ttcaaacatt ctaaaaatga tgaaaaaggt gtacgtattt
    27841 taaatatgat gagtcttttc attctcgtta tttatatcgt actggttgca gtttttattt
    27901 aaaactgcca cttacatatg catatcatgt ccatgaagag ctaacgttgc gtctcagtca
    27961 tagcgcaccg ttagtttttt gtatataact aaacaaaaag gaccgatgtg acattatgtc
    28021 atgtcaccag ccctcttttt tctatgcttg atgataaagt ggcttcaatg agacgagtcg
    28081 cgcaatggct tcatctaatt gtatttcatc aatcgcaaaa gataaccgca catagccctc
    28141 cccttcttca ccaaaaggat gccccggtgc tgccaaaata gattgttctt gcaataaatg
    28201 ttgaataaag gcatcgctgg aaaaaccttc tggacattgc aaccataaga aaataccccc
    28261 tttaatgggt tcatgcggga tggctgcttc attcaaagct gcttctattt tatcgcgtct
    28321 tttcctaaat atgtcatttt gttttttcag ttcatgatca catgcattta atgcgaccgt
    28381 acatgcatct tgtaacgccc cgtacatgcc agcttgggta tgtgtgtgat acttccgaag
    28441 attcgcaatc atttcctcgt taccgaccgc aaaaccgaca cgatacccgg acatattata
    28501 accttttgaa aatgaaaaaa cctctatagc agatgatttc gcaccgtctg cttgaagaat
    28561 actcgggttc ggttgatcga atccaaatgc ttgatacgca aaatcatgca caattttgat
    28621 agaggtgttt ttaaaacggt caatcgtctc ttggaaaaac tcaagcgttg cgacagaacc
    28681 agtcggattg ttcggatacg ttaaatagat gagttttgta tttgtagtat ccacttcatt
    28741 ccaatctggt atgtaatgac gttcaggtga taattttaat ggtttaggta ttccccttgc
    28801 gagtcgcacg cctgcatcat aatctgtgta gcctggatcg ggtaataaca cttcgtcacc
    28861 tggctcaatg acacacgtcg gcaatgcaac aagcccattt ttggtgccat acaacaaaca
    28921 aacttctttg tccggatcca aagtaacatt gaattgccgt tgataaaaat caacaatcgc
    28981 ttgtctaaag gcgtctttcc cttgaaaggc taaatatttt tgattggcgg gcttcacaat
    29041 cgcttcctgt aacgctttta taatttcagg gggtgtgtcg ccatcaggta taccaactgc
    29101 caaattaatc aatggtaatg gcccatgttc aattttttgt cctactgttt tgccaaaata
    29161 actgtccggt atttcactca aaattgttgt atatgccatc gtcttcctcc ttacaaatct
    29221 ttatttttat atggaaatcg ttatacctat aaagagaaag ggctgagaca aagtcatata
    29281 catatcctgt ctcaaccctc ttgcttatgt ttaaggtact ccgtgtcttg cctgacgaac
    29341 cgacttattt tattgaggat aatggtttca tcttacataa tgaaccgctt tacgtcaatg
    29401 gtttatgcct tctttttacg tcgtgttaac ttcgctttta acgtaaacaa aatttcataa
    29461 ataacaggca cgacaataag tgtgagcaat gttgatgata acaaaccacc gataactgtc
    29521 gccgcaagtc ctttcgaaat aagcacagaa ctgtcttgac cgaataacaa cggaattaat
    29581 gcaccaattg tcgctatcgc tgtcattaaa ataggccgta tccgtgtgcc gcccgcttct
    29641 aatagcgctt ctttcatagg taaaccggct ttttcatttg taatgacacg atcaataagg
    29701 acaatcgcgt ttgtcacaac gataccaatt aacataagta gaccaatcat acttggtaca
    29761 gataatgttt caccagttat aattaacgcc aaaacgacac caataaccgt gtatggcagt
    29821 gcgaataaaa tcgtaaatgg tgcaagggcc cctttgaatg tcagaacaag tacgagatag
    29881 acgataatga ttgccgctaa catcgctatc atcaattgtg aaaaggcctc ttgaatatcc
    29941 tcattcgtcc cacctaatga cgtatgcaca tcacttggtt tatcaagttc atttaactgt
    30001 ttcatcactt tttgagaaat cgagccaaca tcttcaccag aaatcgtcgc cgaaacagtg
    30061 ctgacataat cgccaccttt tttcacgagt gcattcggtg tggatgtcgt ttttaacgtc
    30121 gcaatgtcac tcaacttacg attatcccca gttggagaag gaaccggcgt attttctaac
    30181 ttttctttcg tccaatccgt gtctttttct tgttggacaa cgacatcata agtttggttt
    30241 tgatctttca ctttcgaaac cgtcatatct gggatgtttt gattgagcat catcgccagt
    30301 tgacccgctg tcatccctgt ttttgctgct tcatttggat tcactttcac ttcatattgt
    30361 tgatacgttt ctgttaaatc cgacttcaca ttcgttaaac caggcacttg agacattttt
    30421 tgttgaatcg ccttcactgt gccttcaatc gctgcagtag acggtcctgt cacttctaca
    30481 tttaacgtgt tagacgtcgc ccctgtaccc atatctaagt ttttccactc accgtcatga
    30541 tgatatgtct taatatgttt caacacgcgt tcaggttctt gatcaaagtt cggtgtatca
    30601 gaatcgtact cgaccattaa cgccatgtta ttcgtagagc cagtggggtc aacaggtgat
    30661 gcgccaccca cggaatattg cacgtgacga acatgttgat tgccgagcaa atatttttcg
    30721 acttcttctg catgtgataa tactttttgc ttcgtttcac ctggtttagg tgtataggtt
    30781 aatgccataa acttatcttc acccgtacta atgaagctcg ttccaatttt catactccct
    30841 aatgcaatac taccaattaa aatgactgta cttaaaatga tgacagtcca tttatggttt
    30901 aaactccaat tcaatacttt tcgatatcct cgtccaactg taccgagctc agatttcggt
    30961 ttacgtttca agccatgttt aaagaaaatg gaaccgagta ctggcacgat tgtaattgat
    31021 acaagtaatg aagcaagtaa actaaacgta atcgcgtaag caaacggtct aaacatttcg
    31081 ccaaccgaac ctgtcacaaa tgcaagtggt gcaaatacga cgattgtcac taatgtggat
    31141 gacataatcg gaatgaacac ttctttcgtc gcagatacga tgagcccatc tcctgataat
    31201 gattcgtctt gacgtgacag tcggcgatag atattttcga tgacgacaat agaatcatca
    31261 atgacacgac caatcgcaac tgtaagcgca cctaatgtca gtatgtttaa tgagacatct
    31321 gtcagtttta acgccaccat tgcgatgagt aaagacaatg gaatcgaaac aatcgaaatc
    31381 gctgtcatac gtacatttct taagaacaac atgatgacaa tcactgccac gatagatccg
    31441 aggagcgctt tttcaatcat agtatttagt gaatctttaa tcggcttaga agtatccata
    31501 attttgaccg atttaagttc tggatgtgct ttcacgaaat cttgtatcgt ttggtttaca
    31561 tcgttagcga ctgcaaccgt attggcccct tgcgttttaa cgatttgaac atcgacagca
    31621 tcttgaccgt tcgttctaga aatcgattca cgctcatctg ataacttcac ttcggcaaga
    31681 tcacttaacg caaccgcttg tgcactttgt ggattgttta aagatacttg acctgacgtt
    31741 gcatgccccc tctctgatgc acccccgtct tgttgtcctt gtgtgctatt acctgaagac
    31801 tgtgatgcaa gtgctaacgg aatttgcata tttttgagtg cgtcaacgga agcatattgc
    31861 ccatcaacga cgacagactt ttctgtatca ccaaattgga ataaacctaa tggagattct
    31921 tttgtcgcac cttcaatata gtcagacact tgtttcgcat tgagccctgc cttttggagt
    31981 ttcgcatcat cgaactttat cgtcacttta cgctcgattt gcccattcac tgtggcacgt
    32041 tgcaccccgt caatcatttg taatttcgga atcaactgtt ctttaacagc tttggtactt
    32101 actttcacat cgtctttgtc atgtaaaatc gaatacgcca cgacagggaa agcattcatt
    32161 gaattacgtt taatgtctga cgtttgtgcc tcgtctggta aacccacctt tttcagcgct
    32221 ttttcgatat cttgttccgc tttatccata tccgtacttt catcaaaatt gaccgtaacc
    32281 atggaggcgt tagataaaga ttgtgtttta acacttgtga cccctgccat cccccgtatt
    32341 tcttcatcaa tcgggtcact gatttctttc atgacggttt cagaagtggc acccggcatc
    32401 ggtgttgtaa tcgtcaacat cggtggttca gtatcaggca acaattctaa cctcatttta
    32461 aaacttgcat agacgcctcc gagtatgaca aggaatacca tcaataaaat ggcaaacttg
    32521 ttcgataacg agaaatcgat taatttttta accacacgta tctctccctt tgaaatgact
    32581 ttgctacatc attatttcag ttcgtaaaaa tgtaaccttt ccattgaata tatatgatac
    32641 aacgacacgt ttcgttctat cacacttaaa aggtgacacg aataagcacc tacgagatat
    32701 gtaaatgcat aacgtcccac cttctctgtt ttcctttgtt gtacactttg gaattacacc
    32761 acgtttaact tatttatgcg ttcttttgtc ctttacgttg ttgtatcgat ttgatttgac
    32821 gcaccaattt aattttaaat tgtgtcaatt gcggtttaaa ttgttcgacc gctttataca
    32881 caatagggtt gagtacatag tcaaattccc caattttctc gctcaaacgt gtaccccatg
    32941 cctttttaaa cgcccacaaa ccgtaatgac ttgaatcttt gtctggatta tgatctgtcc
    33001 ctccaaaatc ataagtcgtc gcaccttttt cacgcgcaaa ttgcatcatt ttaaactgca
    33061 tgtgatggtt gggtaaaaag tcacgataat ggttagatga agcaccgtaa agataatacg
    33121 ctttgtggcc cgcaaacatc agtaatgccc ctgataaata aatgccctct ggatgcgtcc
    33181 gttcaagttg tgtcatatcg tcaatgagtg cttggttttt attcattttt tgcactgcat
    33241 cttttaactt attttgaact tttttattgt tttgatcttt ttcggctaac gtatccattt
    33301 cagtttgtaa gtgttgttgt tctaccttta actcggctaa gacaggtgtc ggttcaagtt
    33361 tcactaagaa caattccgcg tcaccgtcgg gatgaagcgc atcataaatc gtttcaaaat
    33421 aagaaacatc acgtgttaag aagccatcac gctcacctgt ttctttcatt aaatccgcaa
    33481 atattttcaa gtcttcgcga cctttacgtt ccactttcgt tccacgcttc aatgccagtc
    33541 tcacttttga gcgattgcgg ttttcaaagc tttgaattaa cgcttcatct gactgattaa
    33601 ttggggtaat catcgtcata cgtggttgaa tgtaatcttt agccaagccc tctttaaacc
    33661 ctttatgttt gaagcccatt tttaataaat cttgtacaac tgtcatccct tgatcaactt
    33721 ctacatctgg gtcaatttta atcgtgtacg ctttttcact ttgagcaact tgaatcgctt
    33781 cggatagtaa cgccttcacc gcgacggtat tcgtataatc cacaacgaaa ccgcgtgaag
    33841 cataacaaag cgtaaaaggt gtgcgaggaa tctttttaaa gagtaattgt cccacacctt
    33901 tcaactcacc gttttctcct acagcaatac gtttcgcata ccaacctgtt aattttttcg
    33961 tatcgcccca ttttgtcaat tgtagtaaat caccattcgg atgcgcttta acaaatgcat
    34021 catgttcttg atcggttata ttcatgcgtt tcatttctcg tttaaaactc cttttagtta
    34081 tcgtctactc ttattttcta gtataatcaa tgacacatcc gattgaaacg ttacagaaca
    34141 gatgtattaa tccaaactgg aggtctcgtt atgcgtcaat tgattttact cttactctct
    34201 atcattaata tcatctttat cgtttacaca tttgtatttc atatcggtat cgactactta
    34261 agtttacgca ttatctttgt cgcgttttca ttagttgttg ggatatacag tgtgctactc
    34321 catgaaacga aacaacaact cttgctatca gtcatagaag ccatcattgc actgttgcat
    34381 attgtgctca tcattagtgc cgtatacagc gttgtttatg cgtgaggtgg aataaactga
    34441 tatcttgcgc ctcttgtacg aaaagcgata ggtgcatcaa tggtttgatc gataaattga
    34501 acagcttcta tgccgtcttc tttatcttcc atcactttaa acttgatttt tttcgcaggg
    34561 gtttggagga ttgtgtagcg gtctgaagat tcaacttctt ccatatcaaa ccattgcttc
    34621 caatgatcca ccattgtttg gcgttgatat gtattgactg taatcatatc taaagtcaaa
    34681 tgctgatgaa aatgctcttg taaatcagct tctcgtgttt catctgacgc gtgccactct
    34741 ataaaaaagg gcatgattac atcgaactga tggttggcta catacaacag tcgccattga
    34801 atcgtttgtc cctttttatt ctctctcgtc atttcaaccg gccctaccgt ttcaagccct
    34861 cgcgcttcaa attgtacttt taattgttca atatcgtgcg ttctaaaaca aatcttttta
    34921 aatccttgtc gataaccatt ttccataatc gacgtcgcaa acgagtgctt accgacatct
    34981 gttttagact gttgtttcat tttcccttga tgatatatat ctatcaattc aatataagat
    35041 aaatcgattt ggacgagacg attataagtc cctaaatttt catgttgacc acctgattga
    35101 atttccaaat atttcccagg aaactcgaac tgatttaatc catcaatgta atgaatcacg
    35161 tgatcaaatt ctatatctat catttatgcg ctcactccca attctcatgc cataatatta
    35221 ttttaccaaa tatttgttgt gaaatctcga tataacacgc actgcatttt tgctttgaca
    35281 agcaggcatt tatccaacaa ctttcacatg aagtgttata atatgcttta agaacctatt
    35341 cagaaaggag tctcgtatgg aaccttcaat attatttgat catttcacca agctttaccg
    35401 tccctatatt aaactcgtcc acccattact tgatgaacac caactctacc ccgcacaatg
    35461 gttagtgatg aaagatatcg caatcaatcc tggtacaaca ctcgttcaaa tttcaaaacg
    35521 ccgttcgatt gaaaaaccga cgacgcgaaa aattttaaaa gcgttagatg cacaaggttg
    35581 gttattgatt cgcccaggtg aaatggataa gcgagaaaag catctctatt tatctgaatc
    35641 cggtcaagcg atccatcaaa agttaaagtt acagattggc caacttcagc aacaagtaat
    35701 cgagccgctc caactttcgg acgatgagat tgcacgtgca acagatattt tagaacagtt
    35761 gtatcagtcg ttactcgcac aacttcaaaa tgatgaaatg taacatgact ttggaatgag
    35821 atacaaaaat ttttgatgct attgatgcag aattcttgtt aaacttgccc tcattattga
    35881 attcaagaag tgactgctag ccgtatacac ggatccccac aggagtctca gccttccggg
    35941 caatctcaca ttaaatccag gaaagtaagg gcaagttgat gaaatcatga aaaacaatag
    36001 catcaatttt tttgtcttat tcatcctcat tttcgatgag ttgattagta taaagtaaaa
    36061 acaaaaaagt agctagctat cgggtaaact tgatgtctca gcttttttca acagcttaga
    36121 tgatgtcata ccctttcttt ttttgctgtt tatcgaaaat cgtcattatt ttaacccctc
    36181 aacgccatcg tcttttcacg ctattgtctt ttttatcaat tcatcaaatt tttacaatat
    36241 tgttatagtt gttttggtat acttaacgcg taaacaatat ttttaaggag gcaatctatt
    36301 gaaaagcaaa ttaataactt caactttagt tttaggtctt ctcacgacag gctcaatttt
    36361 ccaagatttg gctgcacaag ctgaaacgac atcctcaaca cagattcatg atattcaagg
    36421 tgcgggtcat acatcacctt tgaaagatca acgcgttgaa aaagtaccag gtattgtgac
    36481 ttatatttat aaggccaaca actcctatta tttccatctc caaacaccag acgcgcaaaa
    36541 agacaacaat cctgcaactt ctgaaggcat tatcgtcttt gccggtaaag agaaacctaa
    36601 cgttaaagtc ggtgatctga ttcatgtttc aggtacggtc cgcgaatatg cgattgaagg
    36661 ttacgcggaa aaacaacaaa cagatttacc attgactgaa attgatgcac gtccagatca
    36721 agcgggccaa atcaccgttc aaaaaacgca tcaaccttta cctcaaccgg taaaaatcaa
    36781 aaaaatcccg caacaaatcg cttctcctca acatttttct gttttcaaac cggatacata
    36841 tgcagttgat ttttgggaag ctttagaagg catgcgtgta gagtttggcg atgtccgcag
    36901 tgtaggtcct caagaccacg gcgaagtgtt tacagtgctg aatcaaaatc gtcgagaaac
    36961 gaaaaatggt ggtatattat taaaacctga taatgccaat ggtcaacgta ttgcctttaa
    37021 aatgaatgat gacaacaagc gcgcacaaga ttttaacatt gtgacggggg atcgcttcaa
    37081 agggccttta attggttatg tgaactacgg ttttcaaaat tataaagtca atatcgattt
    37141 aaaagagatg caacaagcgt atgttaaagg gaaagcacaa cctaaaggaa cgacattgaa
    37201 accatccgaa aataaactga ctgtagcatc atacaactta gaaaactttt caaatgacgt
    37261 taaaagttca agtgatgata aggcacagaa gctcgcaaat ggtatcgtta gccatatgaa
    37321 acaacctgac attgtcggcg tcacagaggt tcaagataac aacggaccga ataaaggcag
    37381 ttctgatgcc tctgcttcat ataaacgtct cattcaagct attaaagatg ctggtggtcc
    37441 gacatatcgt tatgtcaata tcgatcccga aaacaatgta gatggcggtc aacctgaagc
    37501 taatattcgt gtcggctttt tatacaatcc tgagcgcgta acatttaatg accacattcc
    37561 agcgggtgat gccacaacga gcgtcgcgta tgaaaacaac caacttacac gaaatcccgg
    37621 tcgtatcgct cctcaagatc ctgcttttga agatgtacgt aaatcattag ctgctcaatt
    37681 tgactttaaa ggtcaacaag tcattgcgat tgctaaccat tggaaatcaa aacgtggaga
    37741 tgatggttta ttcggcagtc atcaaccggt tcgattaact tccgaaccac aacgcgtaga
    37801 aatcgcacat cgtattggtg aatttacagc gcaagttcaa caacaaaacc ctaacgccgc
    37861 cattatttca gtaggcgatt ataatgattt ccaatggtca aaaccactta aaacttttga
    37921 gtcatatggt ttaacgaaca aggtaaaaga tgtacctaaa aacaagcgct attcatatgt
    37981 ctatcaaggt aatacgcaaa cgctcgatca cattttagta tcggaacatt taaaacgcca
    38041 gacgaaactt gatatgattc acgtaaatag cgacttcact gatatggctg gccgtgcaag
    38101 tgatcacgac ccaatcctcg ctcaaattga ctttactaag caaattaaca agcagaaaaa
    38161 acagaagtaa ccattgatgc aaaaaaagct gggacgatga aattcccagc tttttctact
    38221 tatatcaacg gatgttctaa agtttatcca cctatataat tcatattaat cttcttctgc
    38281 tgtctctttg ctactgtttc tgctgttcgt tcatcagaat aacgatcgtc gcgaatatgc
    38341 cacaatgctt tcaattgtga caaaatttcg gcatcatcca tcccacttct caatagccct
    38401 cgaatatcaa agccgcttcc ggtactgaat aagcaaccat aaaatttacc atctgaggat
    38461 agacgtgctc gcgtacagct cgaacaaaat gaatccgata cacttgtaat cagtccaaac
    38521 tgagcttgac ttccgacatg gcgataatat tgtgcgactt caccataata ttttggagat
    38581 accggttcga tgtcaaattc actcgcaatc atcgccaaca tctcatcttt agtgacaact
    38641 ttactaaaat cccaaccgtt atcattaccc acatccataa attcaataaa gcgaatcgtg
    38701 acggctttat ctttaaaata acggaccatt ggcaaaattt gatgatcgtt gacacctttt
    38761 tgaacgacaa cgttaatttt aactttcaaa ccaatactga tggcataatc gatttgttca
    38821 agcactgtcg tcgccttaat atcacggttg ttaatcgctt gaaatacacg atcttcaatt
    38881 gcatctaaac tgacattaat gcgacgtaac ccagcatcat acagtttttg accgtgcttt
    38941 ttcaataata agccattcgt cgtcaatcct atatcttcaa tgccttcaat ctgtgtaatt
    39001 tgggcgatta attgatggag gtcacgacgt agtagcggtt caccacccgt aatcctcact
    39061 tttttaacac ctaattgtgc atataacttt gtgatacgta caatttcttc aaaagataac
    39121 aattgatttt tcggcaaaaa tacataatcg tcaccgaaaa tttcttttgg catgcaataa
    39181 tcgcaacgaa aattacatct atcagttacg gaaatgcgca aatcgcgaat gggtctgccc
    39241 aatttatcta gtatttggtc tgccatattg cgcctccttt tcttatttcg ctagttctgc
    39301 ttctaatgct gccaaatctt gttgataatt cacattttga taccaatagc gcggactccc
    39361 aatcgtattc gcctctaacc aatctgttga tacttgatca tacacatgtt tcatactcag
    39421 atcatccgac tgtaaaacat tttcaataat aggcaacaca cgtttatgat aaaaagcaat
    39481 ggtcggtatc ggacgtgcat catccataaa accggcgatg tctaaatgtt cttcaatgag
    39541 atttgcaacc ataaactgat acagatggct gattgctttt tgtgtgacca tcggcgtatc
    39601 aacagaaatg acaaaataaa gatcctcatc tgtatcacgg gacatcacac tataaatacc
    39661 ggcgagtggt cctttatctc ggtgtttcgg ttcatctaca acgaccgtgt catgttgaaa
    39721 ttgagaaaat agttgttcat tcgtactaat taaaatctca ttgaacatgt tcgtcgcttg
    39781 taacgtttgg acaagtttat gataaaacgt cgtcccatta attttcgcaa atgctttcgg
    39841 tgagccaaat ctctctgaat gcccacctgc gagtataata gctttcatga ctaatgttta
    39901 acctccactg actggcggaa tcagtgcaac cacgtcgtat ggctgaatga gatcttccgc
    39961 gcgtgcaaac tcttcattga ttgcaacttg aaattttttc ccttgaatga cgggataggt
    40021 ttggtataaa agtgttgtta aatcagcaac aggcaccgca taatcaaaat gaaatacatc
    40081 ttctgagcga ttcacaagtt ctttaatttc tgcaaagtat aacaccttca cgttgaaagt
    40141 cctcctttat tgacagcatc gtcgtgataa ccacgttgat gaccttgcca ttctgcgcca
    40201 tcttcccaaa tttctttttt ccaaattggg acgacctctt taatccgttc aatcgcatat
    40261 tcatttgcag cataggcatc tttacggtga ggtgatgata cgctaataca aactgcaata
    40321 tcagaaattt gaagcgcacc aatacgatga cctatcgcaa tgatggtacc aggccaacgc
    40381 tccgttattt catcaccaat ttgcgctagt ttcttttcag ccataggaac atacgcttca
    40441 tattctaaat actctgtgcg gacacctttc gtccattcac ggacatgccc tgtaaacaca
    40501 accaccgcgc cttgtttttc atttaatgtg tatgcgcggt atttttctgg ttctaacggt
    40561 tgtgttgtca cttcaaattg tttcaaccca atcacccttc gttcatttct atccactcag
    40621 tgagccacgc aaataacgca tgctcatctg acgttgtagc atctctttta attgcaaatt
    40681 tcacattcga caactgttga agttgcgcat attctgcttc attgcgatac acaatcactt
    40741 tatcgtaatg ttcatgtttg taaccttcaa cgaatatgat acttttttta atggtaacac
    40801 attcatcaat taaagtccgt aacggcattt catcagcact ttggacactt tcaatatact
    40861 ggtggccttg cacaatactt tgatccgctc cagcattaaa atggcgcata tgatccaaat
    40921 ggtcagccgg caacttaatg tcctctccag tatgaccatg gtgtttgatc gttaccacag
    40981 catagcctaa acgtttcaca tatgctacta acttttccat aagcgtggtt ttaccaacat
    41041 ctttaaaccc taccacttgt ataatcataa gctactctca cgttgatacg cttctgatga
    41101 tgttaatatc acttgtacgt catgaccttg ttcaaatcca cgtgtacctc ctggtaaaac
    41161 aatcatggca ttactatgcg caatggacac aactgcacct gacttgttga aacctgatgg
    41221 acgtactgtc gcttcacgtc ctgtgagtac tacattggca cgaataaaac gtgtaaatgg
    41281 attcgccttt ttaaagtctt ccatcaacgt cgcacgcacc atacttggat aacatttttc
    41341 agcatgcatc atgtggtaca ttgctggttt aacaaataat tcaaagccag aataacaagc
    41401 tgaaggattt cccgacaagc cgaataaata tttgccttct gatactgcga cagtcgttac
    41461 actacctggt ctcatcgcaa ctttattaaa taacacatca gcgtttaatg ccttataaat
    41521 atctggtaaa taatcaaaat ctcctaccga cacaccacct gttgttatga caatatcgtg
    41581 ttcatcaaat gcttttttga cgacagctaa actactgtca aagtcatctt gttgaatttt
    41641 atatagttca gcttcaatac gttctttacg caataatgca tcaatcatcg gtccgtttga
    41701 attacgaatt ttacctggtt ctaacggagc atcgatatca acgagttcgc tacccgtcgc
    41761 aatgatggct actgtcggtt tttgaaatac aggaacgtca acataaccaa aagtggccag
    41821 aactgcaaca acgcccgcat taatccgttg acctttcgtt aaaacaacat cacccgtcgc
    41881 agtttcttca ccttttattg acacattttc gagtgactca aacggcttac gaatcgtaaa
    41941 accttctgca gtttccaccg tttgttcgag catgataacg gcatctgcac cttgtggcat
    42001 ttcagcacct gtcatgatac gtacggcttg tcctgcttca agttgcttcg tcgacacact
    42061 acctgcaccg atatggtcaa ttactttaaa ttggatacgg ttgtcactcg aagcaccgac
    42121 agtatcgaca cttctcaccg caaagccatc gtaaggggat ttatcaaaac gcggaatatc
    42181 atatgtggca acgatatctt cggcgagtat gtaaccttca ctttcataga tgttcactgt
    42241 cgtcgttttc atctcgatat tttgtttcat aacacgttgt atcgcttccg acacggggat
    42301 aggatgtctt ttttctactg gcatgatgaa ccactcctaa caaaatgaaa aattcatgct
    42361 atactatcct tgcattcaag taaggaggaa taacatgtct gaatttacac accttaatgc
    42421 acaaggtcat gcaaaaatgg tagatgtttc tgacaaacaa gtcacgaaac gtacagccat
    42481 cgcacgttca agcattcaag ttaataccac gatttatgaa caaattacgc aaaatactaa
    42541 caaaaaagga aatgttttaa ataccgcaca aatcgcaggg attatggcag ctaaaaatac
    42601 gtcgtctatt attccaatgt gccatccgtt agcactgaca gggattgatg tcgattttga
    42661 ttgggacact tctgaaaagc aatacatttt gcacattaca acgacagtgt ctacaaacgg
    42721 caaaaccggt gtggaaatgg aagccttaac tgccgcttct gtcactgcgt taaccattta
    42781 tgatatgtgt aaagccgttg ataagggaat ggtcatcggt gaaacttacc tggttcaaaa
    42841 aacgggcggt aaatccgact tcaatcgcac atccgactaa atcgcatcca tctgtaaacg
    42901 gacgggacat cattactttt gcaactttac tatgctaaat gaaaagtgct atatggaatg
    42961 aaaaatcaaa tacgatatga ttaggctgaa atttttgtcg ttttttcttt tcaaaagttt
    43021 gccctaattg atttacagtc tttgatattc aattgctaaa atgggcgaga ttcttgacgg
    43081 aatacgtatc tatagtggca tttgtagcat tcaaaatagt tgtcaataag ggcatgcctt
    43141 tatttattca tttcataaac taaatgtgtg agttctggta atatgagtcg attcagcgct
    43201 aattttacag cacctgttga tcctggcaag caaaagatta acgttcgttt cgctgtacct
    43261 gcaacagctc gagataacaa ggcacgtgtc ccgacatctt ctgtaaagct taaataacga
    43321 aacaactcac caaatccttc aatttcctta tctaataaag gtgtgactgc ttcaatcgtc
    43381 acatctctcg gtgcaattcc tgttccgcca gtcgtcacaa tgacatcgac atctccctta
    43441 agccattgtt gcactgttga ctgaatggca gtcagttcat ctttaacaat catataatgt
    43501 tgaatttcca cttcaaaatc tgccgtttgt aataatgttt gaacgctttg accgccttta
    43561 tctgtctcag tcgttcgcgt atcggaaacg gtcaatactg cacaacggat aggtcgctct
    43621 agtttaacgt tcgtatgcat ggaatcactc cttcattagc cgaataattt atgtatcatc
    43681 acttgtgctg cgtcaatatc ttttaaaccg tgaatgagca gacgaccatc ttgaaaagcg
    43741 acgatacgtg aattttcaaa tttaaattgt aataaatagc cgttggactt gtagggcatc
    43801 tctcgcgcat ctaaaaatga ctttaatcgt tcaaacgtca gttctggatg atgatattgt
    43861 atcgtatcgc gaccacataa agcggcataa gtagacgttc gtgcatttaa atacggatag
    43921 ctcggttgat gaccacacgt tgggcaagct tcacgctgca accgtcgcat gccaaacgca
    43981 aaatgtgtcc cctcccatat atcgccataa gttaatttag gttcaaatgg agtctcggtt
    44041 aaaattttaa aggcgtctct caactgaaaa cttgtcgtca tcgtgacagc tggttgaatg
    44101 acccctaccg tatcacaagt gaggttgaga gagggtattt gtggaactaa acattgaaaa
    44161 caaggcgttt gtccaggaat aaatggtgct gaaacatagg tactttgtac gacgccgcca
    44221 taaatccaag gcacccgata ataatacgct gcgtcattga tgagcatgcg tgtttcaaaa
    44281 ttgtctgtcg catccaaaat taaatcaact gtcggcacat gtgtttctaa aaaatcacga
    44341 tccacatgtg caatgtaagc ctcaatgtgt acatcacgac gtatcgcttg gagcatgtct
    44401 tttgcggcca tcactttcgg tacactttca tccgcatcac gttccgtaaa taacgtctgc
    44461 cgttgtaaat tagaatgctc gatatagtca cgatccacaa tgatgagctt ctcgattccc
    44521 gcgcgcacta atccttccgc aagatgtgtg cctaatgcgc ccatacctac aatgagtata
    44581 gctttcgcat tgattttctg ttgccccccc ggccctattc ctttgtataa aacttgccta
    44641 gaatatcgtt cttcacccat catcataatc ctctccacaa tactattttc aattatacgg
    44701 atttttcgaa agggactcaa cggattgaaa cggctgattc ccctattcat cgcaaggtaa
    44761 aacgatgaaa tcgtaagtgc tgattcccta tatattaaag cagcgaacca aagtagttac
    44821 aagcatgcct ttgatccgct tttaaaatga tttttatttt ctactatgtt gatgtcttat
    44881 ctgaacaact gagcctcgca gttcctaaat ctaccacatt ttcacatgta ctacgttgac
    44941 atcagggggt ctcattctat cacaatgact tcatcagcta atgtgtctgc ctcccatttc
    45001 gaatgtgtca caaaaatgat tggaatatgc cactcatcaa aaacctgctt caccaagtcc
    45061 atgctttctt tgcgcgtccc ttcatccaaa cttgaaaatg gctcgtctaa taataatatt
    45121 tctgggcgca tacttaatgc tcttgctagt gcgacacgtt gcttttcccc acccgaacaa
    45181 tgctctggat aaacatgctt caaatgttcg atattcaaat gtttcatcaa atttgcaata
    45241 tgtgtgttca aacgtatcat aaaggtaatg ttgtccaaca cggtcatatg cggaaacaat
    45301 tgatagtctt gaaacaaata accgatatga cgtttgcgaa taggaacgtg tcgttgttgc
    45361 tccgtatcag tcaatacacg tccattaatt tcaattttgc cataatctgg attacaaata
    45421 cctgcaatga cgttcaataa agtcgttttc ccaatccctg acacgccttg aatagcataa
    45481 attttgggtt gattactttg aatttgaaga ccgatgtgac gttcgttaat ggtcatattg
    45541 atttgaaggt ttaacaatta atccacctca cgataacgct cttgattcat catattcatt
    45601 gtacctatga tactaattgc aaaagacact aaaacgagta cccatagcca tgcttgatgt
    45661 tctctaccct gttgaacgag aaagtatatt tctaacggca acgtattggt tttaccagga
    45721 atgtatcccg caatcatgag ggtcgcccca aattcaccaa tcgcacgtgc aaaggcaagc
    45781 atcgttcctg aaatgatggc acgtttcgac aaaggtaacg tgattttgaa aaatattttt
    45841 cgttcagaag cccccatcgt tcgagcagta ttcagcatac gcgggttgat attgcgaaaa
    45901 ccttggaccg tatgttgata catgagcggg aaactgacga tgactgaggc cacaacagct
    45961 ccaacccatg tgaacacgac tttaatccct aaaatgtcag tgaggagatg ccccacagga
    46021 tggtccaccg aaaaaaacat gagtagtaaa aagcctaata cggtcggtgg taagacgata
    46081 ggtagcagta taatactttc aatcagatgt gtccatttcg attttctata atacatgata
    46141 cgtgcgagtg ttattccaag gataaatacg ataactgtac tcacgaaagc cactctaatg
    46201 gatatccaaa aaggcgttaa gtcaggcata acaatcacct atttttcaaa atgataatct
    46261 tttaaaatac gttgtgcagt gttacttttc ataaagtcat accaagcatt tgccgcttca
    46321 gtatcagtca cagtacccat gcgataaaca attggtgtct ttaatggcgc gtccaaaact
    46381 ttttctacgc catcatgcgg tgttttaccg acatataaat ctgtttgata gacaaaaccg
    46441 agctgtgcat ttcctttctt gacatagttt aacacttctc gcacgtcttt cgcatacacg
    46501 atatgatttt caactgatga ccacttgttt tgatcttcta aataggtttt cgcatatttc
    46561 cctgctggca cggattttac ctcaccgatt gctagctgat cgttatctcc cagttgatca
    46621 atgctttgaa tgtcactgcc tttgcgacgg attaatacca atttgttatg tgcgtaatca
    46681 tatgtatgtc gcactttccc tttttctttt aacatatcga cgtctttcgt attcgctgac
    46741 atgaacacgt ccacaggcgc ccctttgtca atttgttcac gtaatgcacc agaaccacca
    46801 taattaaatg acacactaat gttgggatgt gctttgtgga actctttttc taatactttc
    46861 gttacatctg ttaaacttgc tgccgcagaa atgaccaatg gttgttcgga tgtcgatttt
    46921 ttatcatccg actgcgtacc tttttgccca cacgcagata aaatgacagc gaaaagcccg
    46981 ataaccatta acaagccaac ccaccttttc atatgtcgca cctcctcaat tgctttttta
    47041 cgttaaaaat acgctcgaaa tcagtatatc aaatttcgaa cgtattttga gtcgattcct
    47101 atttagtttt taacatttaa cgttgcaata aaacgttgaa aggcaacttg acccgcttca
    47161 tctcttttaa agacccctgc atcttgaagg acgcgttcaa atttataacc gacttcttga
    47221 cgcacaatcg cttctgcatc atccgtacca aagtcatact cttctttcat gtcttgtgcc
    47281 catgcagtat gcacaccaag gtctaccgtt tcatcgccat ttaaaaatgc aatcacattt
    47341 tgcaattcat tttttaaacg tcccggtaaa atcgctgttc ccatcacttc gattaaacca
    47401 atgttctctt ttttaatatg ttgaacatct tggtgcggat ggaatagacc gtccggaaac
    47461 tcttctgtac gctgattatc acgtaacacg atatccattt cgtatcggcc atcacggaat
    47521 ctcgcaatcg gtgtcaccgt atgatgacgt tctcctgaat cactatacgc tttcacttgc
    47581 acactcgcat cactgtaact ctcccattga tgacgtatcc attcgcttgc ctcaattaac
    47641 tgttccgtat ctgtcgccat taaacgaatg acactcatcg gccatttgac gataccagcg
    47701 tgtacagttg gaaaatcctt taattcaaag gcgcgttcga ttggtgccag tgccattgga
    47761 aaagtatggc gtcctgcttg ataatggttg tgcgataaga tcgaaccacc aacaacagga
    47821 atatcggcat tcgatccaat cgtatagtgt ggaaattgct ttacgaaatc aagcaagttt
    47881 tcaaatgttg cttgattgat taacatcggt gtatgttcac gagataacaa aatgctatgc
    47941 tcattaaaat acagatacgg agaatattga aacccccatg cttcaccatt aatttgcatt
    48001 tgcacaatac gatgattcga acgtgccgca gaagtcatcg tgccatagta gccttcattt
    48061 tccatacaaa tcgcacactt tggataaaag gactcaggtg catttttctc tcgctcaatt
    48121 tgttttgcat ctttttcagg ttttgataaa ttgatcgtaa tctcaaaatc accataagct
    48181 gtcggcacgt gataaacgat atttttcgca atcgcttctt ctttaatgta atgattcaga
    48241 tggctcagtt gataaaaata gtctgtcgct gcttctggcg aaagttgata acgcttataa
    48301 aattcacgat tcactgtcga aggtttcggc gtgattaaat ccatcaaact cgcttctaac
    48361 tgttcacgcg ctgacaaaat atcttcaaac gcacctcgct caattgcatc ttcaatgagt
    48421 aaattcacga tttcaatcgg cgcttgcggt tgaatgtcat gttcagtgtc taaaagtgca
    48481 atatcgtctg cctttatacg tgacaaaatt tggttgacga cataaatacg gtcccccgct
    48541 tcatagtcac catgcgcaat aatagcatct gcaaattgat acacatgtgc tgcgtttgcc
    48601 ataatgaacc tcctttagac attttcgtag ccattcgggt gtttttggtg ccattcccaa
    48661 gcagtacgga taatttcatg aatatcatca tgttgtggtt gccacttcaa taacgctttc
    48721 gctttatcac ttgaagcgac taatttactt ggatcaccca cacgtcttgg tgcaacaact
    48781 gccggaatgt ctcgacccgt cacttcgcgt gcagcattta aaatttcttt gactgagtat
    48841 ccgtgatttg tccctaaatt gaacgcacca ctttcaccac ccgcttttaa ataatcgtac
    48901 gccaaaatat gtgctgaaat taaatctgta acatgtaaat agtctcgaat tggcgttccg
    48961 tctggtgtat cgtaatcatc accaaacatt ttcaattcat cacgttgacc taatgcaact
    49021 tgaaggacaa caggaatgag gtgggtttct ggatgatgat cttcaccaat cgcaccgttt
    49081 tctttagccc ctgcaacatt aaagtaacgt aacgcagcgt agttcacacc atacgcttca
    49141 tgacaccacc gcatcatttt ttccatcaca agtttacttt caccgtaagg acttgttggt
    49201 aatttttgtg acgtttcaac aataggaact gcttcaggtt ccccgtaaac tgcagctgtt
    49261 gaactaaaaa taatatgttg aacatcatgt tctcgcatca cttcaagtaa cacttgcaat
    49321 ccataaacat tgttgttgaa atattcaagt ggatattcta ctgattcacc gactaacgaa
    49381 taggcacaga aatggaacac gccctcaatg tcctcttttt cgaaaacgtc atttaaaaat
    49441 tcgcgattac ggacgtcccc ttcataaaaa cgcgcatctg catgaaccgc ttcacgatgt
    49501 cctttgacta aattatcgac gacaacgaca tcataaccga cttcaactaa ttgatcgaca
    49561 cagtggcttc cgatataacc cgcaccacct aatacaagca tagacatact ccatacactc
    49621 ctttattttt cctctaaagt acgtacaccg tttgcgatat ccacatgata gaacgacggt
    49681 gcatacccta ccgtttccgt atatgcttta gtcacctttg cttcgaggtc agcaatttta
    49741 tctttgtgta ctaacgcaat cgcacatcct gcaaagcctg cacctgtcat acgtgcccct
    49801 aaaacaccgt cgacttgttg tgccgcttct gctaatgtat ctaactctaa tcctgtcact
    49861 tcataatcat cttttagtga cgcatgagac gcatttaaca attgaccaaa cgcttcgaaa
    49921 tcatgtgctt gtaacacttc gtatgctttt tttgtacgtt cattttctga aatggcatgt
    49981 ttcgcgcgac gtcgaagcac atcatcatca attttgtctc catatttttc aaattgtgct
    50041 actgaaatct cacctagtga ttgcacatca agataatttt gtaattgagc taacgcacgc
    50101 tcacattcac ttcgacgttc gttatatttc gactctgcaa gttctcggcg tttgtttgta
    50161 ttcataatcg agattttgta atcaccaaac tctgtcggta cgtagtgata ctctaacgta
    50221 ttcgtatcta acaaaatcgc atggtccttt ttaccaaatc cgacaataaa ttgatccatg
    50281 atccctgaat tcacacctat aaattcattt tcgacacgtt gtcccatttt cacgagttca
    50341 aggcgctcca tttcaatacc gaataaatgc gtcacaaggt gtcctgttaa taactcgata
    50401 gacgcagatg atgataaact tgcgccattc gggatgttac cttcaacaac gatgtcaaag
    50461 ccacggttaa tctccggaaa ttgctcaact aaataacgaa tcattccttt tggatagttc
    50521 gcccactgat gttcagcatt gtaatctaaa tggtctagat cgaacgccat cacacctgct
    50581 gattcaaaat tcactgagta aagttgaatc ttacggtcgt cacgtaaacg cccaacacca
    50641 tatgttccta attcgattgc tgctggaaat acaaagccac cattgtaatc tgtatgttcg
    50701 ccaattaaat tgatacgccc tggtgcaaaa gctgacaatg ttggttctcc gttaaaaata
    50761 tttttaaatg tttgagttag gttttgcatg tctcacaccc caaagtcttt atagtaaaca
    50821 acaaatacag tttactgttt atccttataa ctgtcaactg agaccgcttt caaaaaactt
    50881 tcccgatagt ttaaatacgt attcaactgc atatgaatcg cgacttgacg ttgtcctttc
    50941 atttgatctt gtgctaaacg caccgcttga cggccaaact cctcaatagg aatacgaacg
    51001 cttgaaatca tcggcgctgt atattgcgtt atttcagaat cattaaagct gactagttgt
    51061 acgtcttcag gtacacgtat ttgcgcttgt tgtaaccctt gcaatacgcc aactgcaagc
    51121 acatcattgc cggtaatgac gacttgtggt agcgcgccag actgtgcaat tcgttgccct
    51181 atttctaggc cattgtgacg ctcccaattt gacggataat aaagttcttc tgcatttgtt
    51241 tgtgcacacc aatcaatata ggcgcgttgt ctcgcatcag caaccgtatc atgcgtttga
    51301 cccacatcac gcacctttgt ttctccacca acgtatgcca ctttgccgac atgttgctgt
    51361 tgaagtgatt cgagtaacac ttgcatgctg tcatataaat cagaagaaac cgcatcgata
    51421 tggttcggtg catcgatttg attaattaaa ataagccgtg cattgtatgt ataaagctgt
    51481 tgaatcactg attgtttaaa tggtccaatg acaattacag accccgcctt ttccacttgt
    51541 tgcagttgtt caatcgacgt caatgtattc gttcgaatcg ttttcttcag cgttaaattc
    51601 aaatgcttca cttctttttc aatcgctaat cggagttctc gataatacgg gtcaatcatt
    51661 tctttttctt ttgacgcatg tgtcacaatt tggatttgcc gtgtcagacg cttttgtttt
    51721 gtataattac gtgcattggc aatttcgata atgcgctgtc tcgtctttgt tgcaacagaa
    51781 agcgaaggat cctcattcaa tacacgcgac accgtaccag gacttacacc tgcctctttc
    51841 gcaatctctc taatactcgc catcattcaa cctactctct tcatttgttt actacagttt
    51901 acttcttttg ttttttcttt tcaactctct tcatatttca aattctgtta atatcattgc
    51961 agaaagttta aaattgaaat atacataaaa gcatttgtac gttttttgaa aggaggttgt
    52021 accattgagt cctgacttta aaacgaacca accgattgta cgttttgaaa atggtgtttt
    52081 atttgaaaca gaagatgatt atgtgacaga ggtgccgctc acaatcatgg tgaaccgaga
    52141 agaatttgcg acagtcattt gtagccccaa tcaattggaa gaactagtgc tcggatttct
    52201 cgcttctgaa ggggtcattt taaaacgaga tgagttaaaa tcgcttgaaa ttgatgaacg
    52261 gcgtgggtat gcgcacgtag aaatcacatc gtctatacat gatcgtgtgc aactctcaac
    52321 gaaacgcctt gtcgcttcat gttgtggaaa gagccgagag ttttatttcc aaaacgatgc
    52381 cgccattgcg aaaacatcaa tgtccaacct tcaattgaca ccttctcaaa ttttaagcat
    52441 gatggcacgt ttacaagcgc aaagtcgtgt ctttaaagca acagggggct tacataacgc
    52501 agccattagt gacggcaatg cattttacat tcatcgtcaa gatatagggc ggcataatgc
    52561 actcgataaa ctttacggct actgtattca acgacatatt ggggtgcggg ataaggtact
    52621 catttttagc gggcgtatct cctcagaaat tttaatcaaa gccgctaaaa tcggtgtcgg
    52681 tatgattatt tctaaatctg ctccgacgac attagcagtg caacttgccc atgatctaaa
    52741 cattactgca atcggtttcg tgcgtgacga ttactttaac atttacagtc atccagaacg
    52801 tgtcaaacaa acagaaatgt aaaaaacagg cgctgatgag agctgtctca ccatccgcct
    52861 gtttattttc atttctgttg tcatgtgcga gtacccccat caatacgata ctgaaactgt
    52921 taattccttc agggcactat actgaaaact aacaaatgta taaccttgtt tcatatacat
    52981 ttctctcgct gtatcttcag catcagcaac taaaatgacc ggacgttcac gcgcgatttc
    53041 ccccataaac gcctgcatcc ttgagcccac gccacgtcca cgcgctgctt cagttactgc
    53101 aaaaccatcc agttccaccg ttcgctccgt ttcaatcaca ttcataatgc caacaggttg
    53161 tgcattttca taagcgatat aaggttggag cgcacgcgtg tcttttttca aattcgttag
    53221 caatgcctgt gcactttctt taatataatc tgcgccaaat tgaatagaga gtggctcata
    53281 gacgtgcatg taatctgcca tgttctttat tgtcacaggt tctatctcaa gactcggtcc
    53341 agtcaactga cgtaaatctg ctgcctcaat catatacagc tcaagattac cgacttgaaa
    53401 accttcagca cgtaaaagtt gcatgatatc tatgttcggt ttgacgtttt ctggaaattc
    53461 aaatttgaga tgtgtcaaca caccatggtc agcatgaagt gattgttgcc gtttcatatc
    53521 tgctttaaac tgagtcacat ccggcatttg atgatatacc cacttattat tatcataagt
    53581 cagaggtgtc gttggcgtca tataaatcgt tacgtcgtca tctttagaat aaatatcgcc
    53641 ttcactgtaa atatcactca tctgaacttc catttacatc ccctactttc aaggtttatt
    53701 ttgctaattg ttgcatgatt ctcgacacca caggattatt aaacagtgcg attgcaatga
    53761 gtgatgctat agctgcttta actaagtcac ccggtaaaaa tgttaatgat aaatagatcg
    53821 ctttagacaa tggcatatga atcacaaagc ccatcacgat ggcaccgact aagtctaata
    53881 acaccacccc gaagataaca ataatcgcaa aagtacgttt aaaatctaat gtttcaaaat
    53941 atttatcacg catccaacca attaaaaatg cgacgatagg atacatgatt aaaaagccga
    54001 cactcggtcc aacaaagaca ccataaccac cacgtccgcc tgaaagcaat ggcgcaccca
    54061 tgaatacaag taataaaaat acgataacac ttaatgtgcc atagcggcgt cctaacaaaa
    54121 tacctgccaa aaaaatccca acgttttgga gcacaatcgg tacagggata aatggtaaag
    54181 gaatagctgg aataaaaccc atgaccgcga taatggcagt cattaatgcc gtataaacta
    54241 aaaatttcgt gttcaaaatc tttttcctcc taaaaatgat aaaaaacatt tcattccaga
    54301 ttatagcatt aatgtaaata caatttctat acttgtttac aattcggcaa ctgcaccgag
    54361 caatgcggca tgattttgta attgtgcgac ttcaactttg gcatgaccgt aattttcagg
    54421 taaatatcgt ttcaactccg gcaagatata acgtaataac acgtcacctt gtgcagaaac
    54481 tccgccacca ataataatca attccggatc ataaacaatt tgaatttccg caatacctcg
    54541 tgccacttca cgcgcccatt gctgaatata atgtcgtgct gtggtgtctc cattctccgc
    54601 ttcttcaaac agttgctgaa tattttgatg cggatagttt tctctcatta acaattgttt
    54661 taacgcttca gttgaggccc gctgttcata ttgtgtcttc gtttctggat cgtataataa
    54721 ataaccaatt tgatttggac gatgacgtat gcccgttaat aatccgacat tgcgttgata
    54781 ataactgccg ccaatgcctg tacctaaagt taaacaaaac gcactctcat aatccacttc
    54841 tctttcatcc aactccccta acaatgctgc atcgacatcg ttatagacga cgagctcttg
    54901 aacataggca cttagtttat ctacaaagtt tgtgcctgta taattcaaaa tattggggtt
    54961 ggcgtaagca atcgtacgcg cctttctatc tacggccccc gctgttgaaa tacctactgc
    55021 gaccgcttgt agttgatgtt cttgaatata acgttgtaac cttgcctcaa cataattaat
    55081 aatggcgtca ttttcattaa cgggtgtacg cactttatca taatcttgta attgtcgatt
    55141 ttcatcaata atggctgact taatataagt ccctccaatg tcaaaagcta tttttttcat
    55201 aaaactctgc ccctctcatg agatgttgcg ttaacaatgc cttagccaac gaaaaatttc
    55261 catccttcaa tgcttcataa atattacgat gttctgtcat actccgcaca ttttcttcgt
    55321 gtgatgtttc gataggggtt tgataaaaat acgcttgcac cacggcactc atttgttgaa
    55381 ataatgatga gtccactgca gtgagtatac tttcatgaaa tttttgatca gcagatacat
    55441 taaacgcttg cacatcatcc acaagtgact ccgctattga agttaatggt gcctgtttac
    55501 gttcaataat atcaatcgct gccaattcga aagtcagccg taacatcatt aaatctttta
    55561 aattaccatg agagacttga aaactaaata aaaacccttc aatcagtggc gtaatatctt
    55621 gtgctttcac taatgtgcca cgtccttgta cactttcagt cacaccagtg ttttcgagat
    55681 aacttaaagc ctctcgcact acagagcgac tcacttgata cgactcggct aatttgcgtt
    55741 cagttggtaa tttatcccct acctgtaatg actctgctat aatataatcc ttaatctttt
    55801 gtacaactgt ttgctttaaa cttttaccag aacgacttaa catttctgcc atgctcctta
    55861 ctaactcctt gtgtacagtt tagtacagtt taacataatt gatgatacac gttgtaaaaa
    55921 aattgacctc ttcattgata acgcttacaa ttagattata aattggtcag accaatatta
    55981 caaacagatg atttattgga gggtgtacca tgcatgaaaa tttaaaaggt ttatatgcag
    56041 ctttactcgt cccatttgat gaaaacggac aagtgaaaga acaaggttta agagcgatta
    56101 tccgtaacgc gattgacgaa caacagttag atggcttata tgttaacgga agctcaggcg
    56161 aaaacttttt aatgaatacc gaacaaaaga aagaagtttt ccgcattacg aaagatgaag
    56221 caaaagacga tattcgctta attgcacaag tcggttcatt agatttaaac gaagcgattg
    56281 aattgggtca atatgcgaca gaactcggtt atgattcatt atcagcagtt acaccatttt
    56341 actatccatt cacgtttgaa gaaattcgtg actattattt cgctattatt gaagcgactc
    56401 aaaacaatat gattgtgtac tctattcctg gattaactgg tgtaaatatt tcaatccaac
    56461 aatttgagga gcttttccaa aacgataaag taatcggcgt caaatataca gcacctgatt
    56521 tttatttact cgaacgctta cgtcaagctt tcccagataa gttgattttt tctggttttg
    56581 atgaaatgct cgtacaagct gcgatttcag gcgttgatgg cgcaatcggc tcgacgttca
    56641 atgtcaatgg tcgtcgcatt cgtcaaattt ttgaacatgc tcaaaatggt tcggttgaag
    56701 aggcttatcg cattcaacat gacacgaatg atattatcga aacggtgctg agcatgggtt
    56761 tatatccaac attgaaagcc attttagctg aaaaagggat tgatacaggt gtgccaaaag
    56821 caccattcca tccgtttaac gaagcacatc gcgacgcatt gaaaacattg atcaaccaat
    56881 atcaacttta agataatgag actttgaatt aaaaagagtg aagtactaac gataaataga
    56941 cacagagtta tgcttcactc ttatactttg ctatatattg taagcggttt ctaaaaaatc
    57001 attatattga acattgaaag gggtttgttt ttatgggaac aattggcttt ggtttttgga
    57061 actggattgc tttaattcta tacttactaa ttatgttagg tgttggggcg tattttacga
    57121 aacgtgcagg gaaagatacc gatagttttt ttaaagccag tggccgtcta ccgtcatggg
    57181 tcgttggatt ttctatttat gcgacaactt taagtgcgat tacatttatg tcaacaccag
    57241 aaaagtctta tttaacggat tggtcttaca tagctggtaa catcgcaatt gttgctatta
    57301 ttccgttact cattcatttt tatattccat tctttaaaaa acttaaaatc acttcagctt
    57361 atgaatattt agaagcacgc ttcaaccctg cagtacgtgt gataggttct gtcctattta
    57421 tattatttca tttaggccgt gtagccattg tgatttattt accgacactt gcaattacag
    57481 ccgtttccga tattaatcct tatttagtcg ctagccttgt cggagtttta tgtattattt
    57541 atacgtttct tggaggtttt gaaggggtcg tatggagtga ctttattcaa ggtgtgattt
    57601 tattaggagg cgcacttgtc attattatta ccggaattat gcatatcgac ggtggatttg
    57661 gtacggtttt gaacgaagca gtgagtaacc ataaactcat cagcgcagac aactggaaaa
    57721 tgaacgccgc cgctgcagct atcccaatca ttttcctcgg tagtattttt aataacttgc
    57781 aacaatatac agcaagtcaa gatgttgttc aacgttatca agcgtctgaa tctttaaaag
    57841 aaacgtcaca ttcgatttgg acaaatgggg tgttggccct catttcagca cctctctttt
    57901 acggcatggg aacggtactg tatgtttttt atgccactca tacagcacta ccgaaagatt
    57961 ttaatacatc atcaatcgtc ccttacttta tcttaactga aatgccacca ttcattgcgg
    58021 gattgatgat tgcagcaatt ttcgcggccg cacagtcaac gatttcatca agcttaaact
    58081 ctattgcagc ctgtttctca gtagatatta aacaacgctt ctttggaatt aaaagcgatg
    58141 caactgaagt gcgtatggcg cgtgtaacga ctgttgttac aggactcatt ggtatgctta
    58201 tctcattgta tttaatcgca gcagactcta atgacgtatg ggatcttttc ttattaatta
    58261 cagggctatt cggggtacca attgcaggca tctttgcggt cggtattttc acgaagcgta
    58321 cacatggtgt cggtgtcatt atcggtattt ttgtcgcagt catcgtcagt tatttcttac
    58381 aaggacaagg cattggtggt gcaggctcac cattctacat ctcaattatt gcctttatga
    58441 cagcgtttat cgttgcatat atcgcaagtc tcattatccc aacaccgaaa aaagatattt
    58501 ctggactaac aatttttgat aaacacggtg ccatcacata cgtgcgtaaa acaaaataat
    58561 tcatctcaca aaaaggtatt ccatttcttt tgagttgtgt actcaataga gtgagatacc
    58621 tttttcattg gcggttagac cataagagat aaaagaaagg aaaacttaat ctcccctcct
    58681 catgcatagc actctatttg aaagcatcaa aatccaccat cactttcaac gctgtatcat
    58741 ttaatcaaag cgttggttag ttgaagcgag gacgtgggaa cgctcctttt tttctccact
    58801 tattactacc aaaaagcggt accactcaat tgagagtagc accgctttct tattttgccg
    58861 acccggccga gacgcctgag gcattagctg aaacggaaaa tccaattcgg cttcctccct
    58921 agtacattga attgagttga agtttcagcg cctaggaacg cgaggtctat attaaaggtt
    58981 tctcttctcg cctatgaaaa agcgatacca ctcgataatg agtcgtacca ctttgagatt
    59041 gcaaaaacca ttcaagactc ccgagggata gagccgaagc ggaaaatcca ccaacgcttt
    59101 catctctgta tcatttaatc aaagcgttgg ttagttgaag cgaggccctg ggaaagcgca
    59161 gaatggttta gtaatctcag gttacgactc atcttaattc gttggtaacg ctaaaagttg
    59221 tttctttaaa tccttacgaa tgacatctaa tgtatatgga tcgttatacc aatacacact
    59281 tgaatctaca ttaaacgcat atttgttttg taccgcttct aaattttgcc acattgctgt
    59341 tttttggaat tcaggttgtg cggcatcttt cgctttcgct gtaataatca cgtctccagc
    59401 atatttgccc acttcttctt tcggcacttc tgtccaacct tctttttttg ttgcatcgtc
    59461 taacgcttta ggcatttgta aaccgaacgc ttggtaaagt acttcactac cgcgtcccca
    59521 gtttttacca taagcataaa ttttcttatc aaagtcttca aaaatcgtta ctgatgtgtc
    59581 attaccaaga tgcgctttaa tgtctttacc atcttgtgcg gtttgtttct cccaatccgc
    59641 tttccatttt ttcacttcat ctgacttacc gacaatgtca cccattgctt cttgttgttc
    59701 aagataattg tatttcgcat agtcaaaagc aatcgttggt gcaatttttt tcaatttatc
    59761 tgtgtttttg tctgtgttgt atgtaatgat gaggtcaggc tttaatgacg ctaccttttc
    59821 tacatcttct gcccctactt tatccacatc tttaaattgt ttcgcaagca ctggactttg
    59881 gtcaacttga tcggacacac cgacaatatt tgcatcaaga tattttaaac cgcccgcata
    59941 cgtcggtgcc atgacaacaa ttcgttttgg gtctttcgga atatcgattt tttcctcacc
    60001 tttagctgtt ttgagattga aagcttttgt ttccttttca ctactttgat tatcattctg
    60061 gccacatgcc gccaaaatta acataca
//
LOCUS       DANHPA010000003        57712 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.003, whole genome shotgun sequence.
ACCESSION   DANHPA010000003 DANHPA010000000
VERSION     DANHPA010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 57712)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 57712)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..57712
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.003"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..331
                     /locus_tag="PTC28_000146"
     CDS             <1..331
                     /locus_tag="PTC28_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HDK5715470.1"
                     /translation="QKANLFLQYIGHTLKEHLQQGESFSHILLQLDCFEPQFISYIKQ
                     GEKRDKLDIELEVYSTFLLERIEAMIHQHIKWIQPIMFAFIGILVLSVYLIMMLPVFE
                     MMQAIKE"
     gene            344..667
                     /locus_tag="PTC28_000147"
     CDS             344..667
                     /locus_tag="PTC28_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDK5715471.1"
                     /translation="MIQQLKLKFNKKKGFTLIEMLLVLLIISVLLILIIPNIAKQSDH
                     IQKTGCAAQLKMVDSQIEAYALKFNHKPNTIDDLVREGYIKESQKTCKSGEEITIRDG
                     EAVAS"
     gene            645..1085
                     /locus_tag="PTC28_000148"
     CDS             645..1085
                     /locus_tag="PTC28_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDK5715472.1"
                     /translation="MAKQLRHDGFTLIEMLLVLAIISVFISITMAHPQFNLFHNTTEY
                     EIKKLTSEIDYYQAYAIKSHAPVMLLFRPNRNDIKIETIHPHRVTTIPLAPLQLKMTS
                     NIHALIFDKDGKANQFGTLRFEHQQRAFSLIFHIEQGRYRISYQ"
     gene            1178..1390
                     /locus_tag="PTC28_000149"
     CDS             1178..1390
                     /locus_tag="PTC28_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715473.1"
                     /translation="MTHQMVKTYREAVEDLTLKRTLFEVIQHQIPEKKLTVSHYEIIP
                     TAHQLCIQNHQTKQKYCYRKAGLHAH"
     gene            1362..1781
                     /locus_tag="PTC28_000150"
     CDS             1362..1781
                     /locus_tag="PTC28_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDK5715474.1"
                     /translation="MEKQGFTLIESLVALVIQMTIVLLIPLLIFSLGQLKTTVFEDRT
                     YDIELMIKDISHTLHAKDVKAKMIKKKELEIRDSNTEINYKLRNQKIIKTVGHRGNIT
                     MCNHVVDVHFEKLTHDLMLMKITYQEGTTTHEREILL"
     gene            1945..2472
                     /locus_tag="PTC28_000151"
     CDS             1945..2472
                     /locus_tag="PTC28_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HDK5715475.1"
                     /translation="MKLKMDTPLLFIGFMGAGKTTIAETLAESYQCSFIDLDAYIETE
                     TQKSIPQIFEEEGEQGFRRHEFECLEKAIQSYDIIATGGGILTYDATYQFLKEAEVKA
                     IWVDAPIEALYERVKDDTNRPNANKKSFESLKHLYSTRISRYNEIAFIKISSAAPLSE
                     TLNEIKIKLSANDQY"
     regulatory      2459..2554
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            2630..3721
                     /gene="gcvT"
                     /locus_tag="PTC28_000152"
     CDS             2630..3721
                     /gene="gcvT"
                     /locus_tag="PTC28_000152"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017636954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HDK5715476.1"
                     /translation="MSEELKKTSLYQHYVDAGAKIVEFGGWAMPVQFSSIKEEHNAVR
                     TNVGLFDVSHMGEIRIEGPEAAHLVQYVLSNDTNQLTLSKAQYTALCNEEGGVIDDLV
                     IYQLGETQYLLVVNAANVDKDYDWIVQHSSRFDATVTNVSDQYGQLALQGPNARRIIQ
                     DNVSEDVSEMGMFEFKQNVKIFGKNVILSQSGYTGEDGFEIYCDSEDVTTIWDALLSK
                     DVTPCGLGARDTLRLEAGLPLHGQDLSESITPYEGGIAFAAKPLIEEDFIGKSVLQSQ
                     KENGAPRRTVGLRMIDKGIPRTGYTIYDLDGNEIGEVTSGTQSPSTGHAIGMGIIARD
                     AFEMGKEVVVQVRKRQVKAKIVKKNQIER"
     gene            3734..5083
                     /gene="gcvPA"
                     /locus_tag="PTC28_000153"
     CDS             3734..5083
                     /gene="gcvPA"
                     /locus_tag="PTC28_000153"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002465752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HDK5715477.1"
                     /translation="MSHRYIPLTEKDEQEMLETIGVKSIQELYSDVPEDVLLSRDLNI
                     ADAEPETQLLKRLTRIANKNITKETHTSFLGAGVYDHYAPAVVDAMISRSEFYTAYTP
                     YQPEISQGELQAIFEFQTMICELTAMDVANSSMYDGMTSFAEACLLAWGNTKKNKIVV
                     SKGLHYQALQVLNTYSKIREQYEVVTVDLDGTVTDLKKLEAAIDDETAAVAVQYPNFY
                     GSIEDLEAIQTLIADKKALFIVYANPLSLGLLTPPGEFGADIVVGDTQVFGIPTQFGG
                     PHCGYFATTKKLMRKIPGRLVGQTTDDEGNRGFVLTLQAREQHIRRETATSNICSNQA
                     LNALASSIAMSALGKQGLQEIAVQNMENANYAKKEFKNNGFTVLDGISYNEFVVRFDR
                     SIAEVNRALLDEGIIGGFDLSVVDDTFENHMLVAVTELRTKEEIDTFVQKAGEINGK"
     gene            5073..6545
                     /gene="gcvPB"
                     /locus_tag="PTC28_000154"
     CDS             5073..6545
                     /gene="gcvPB"
                     /locus_tag="PTC28_000154"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HDK5715478.1"
                     /translation="MVSKSSPLIFERSRKGRFAYSLPQREIDNDVTNQLLDSKFIRKN
                     KAEFPEVSELDLIRHYTELSNKNFGVDSGFYPLGSCTMKYNPKINEKVARIPGFTEAH
                     PLQDEDQIQGALEIIYSLQEELKEITGMDEISLQPAAGAHGEWTALMIFKAYHLQNGD
                     AERDEVIVPDSAHGTNPASAAFAGFKSVTVKSNEKGEVDIAHLKEVVSDKTAAIMLTN
                     PNTLGIFETNIMEIRDIVHEAGGLLYYDGANLNAIMDKVRPGDMGFDAVHLNLHKTFT
                     GPHGGGGPGSGPIGVKKELRDYLPKPLVVKNGDRFEYDNDIPYSIGRVKPFYGNFGIY
                     LRAYTYIRTMGYQGLKEVSEAAVLNANYMKARLKDTFVIPFDQYCKHEFVLSGTKQKK
                     LGVRTLDMAKRLLDFGVHPPTVYFPLIVDEGMMIEPTETESKETLDYFCDALIQIAKE
                     AEEDPDKVLEAPHTTIIDRLDETTAARKPILKFENLKEEK"
     gene            complement(6901..7287)
                     /locus_tag="PTC28_000155"
     CDS             complement(6901..7287)
                     /locus_tag="PTC28_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016425163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDK5715479.1"
                     /translation="MSNMTLIVLIVLALVIIWMVTNFIINKRSVTELNQEEFQEGIRK
                     AQVIDLREKADYDYGHIIGARNIPMTMFRQRYQGLRKDQPIYLVDANGIASYRAARTL
                     KKKGYTNLYMLKGGYKKWTGKIKSKK"
     gene            7438..8268
                     /locus_tag="PTC28_000156"
     CDS             7438..8268
                     /locus_tag="PTC28_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase family protein"
                     /protein_id="HDK5715480.1"
                     /translation="MTETWHFMNTGSHHPYYNMALDEALLNFVSRGEIDPVVRFYTWN
                     PPTLSIGYFQRLSKEIDIEKVKEKGYGLVRRQTGGRGVLHDKELTYSVIVPEAHPDMP
                     QTVTEAYRVISGGLLEGFKSLGFDAHFAVPRSKEEREKLKQPRSSVCFDAPSWYELVV
                     EGKKIAGSAQTRQKGVILQHGSILQDVDIDDLFDMFIFKNERLKAKMKEAFVEKAVAI
                     NDLSNETITLAQMEVAFKEGFKKALDIEFKPLELTVAQQDEVKALEEKYRSEAFLYRK
                     "
     gene            complement(8384..8608)
                     /locus_tag="PTC28_000157"
     CDS             complement(8384..8608)
                     /locus_tag="PTC28_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715481.1"
                     /translation="MTTFQKMIFGVIIFVALIGLIFNLDVVLFSIFRSIITVAIIVGI
                     IYLVYFFFFLTPDQRDYKKRVWKNKFKGRR"
     gene            complement(8629..9228)
                     /locus_tag="PTC28_000158"
     CDS             complement(8629..9228)
                     /locus_tag="PTC28_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715482.1"
                     /translation="MKKRICASISVAFLLSACGSQNLLPLEKRSTDLSDKNHEIKLEN
                     QQLKNENAKKQKQVDALKKDSENTKQAKSNQKKADYLEISSQYYASVTDAINAYQQID
                     SKVLANKKEDKVLDQLDQIIEDHESAMESYQDATEDEKIVKKDKSIKAQDKEIKKLQK
                     EINSALTMIRKGYKAKDKNEIQKGRQSLSNINVKTTNAG"
     gene            9323..10393
                     /locus_tag="PTC28_000159"
     CDS             9323..10393
                     /locus_tag="PTC28_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HDK5715483.1"
                     /translation="MKNRLQKIRTLLQDKHLDGLTVLSDFNRRYLSGFTGTSGALIIT
                     QDKALLITDFRYTDQAQQQATEFEVILQKGDLFSALTEQFKTLNLQNIGFEGHLVAYD
                     SFLKLNQGRHDLISIGQAIETIRQTKDEGEIKAIQKAAQIVDEAYKYILTVVKPGMTE
                     KEVKAHLESKMLHLGADDTSFDTIVASGIRGAMPHGVASDKVIQSGEMVTLDFGAYYN
                     GYCSDITRTFAVGQPSEEMVKIYNIVLKSQEAAIAAIRPGMTGKEMDSIARDIITEAG
                     YGKHFGHSLGHGIGLDIHELPGLSQKSDVVLEKNHCVTIEPGIYVEGLGGVRIEDDIL
                     ITENGGERFTNCTKDLIILKEE"
     gene            10412..10969
                     /gene="efp"
                     /locus_tag="PTC28_000160"
     CDS             10412..10969
                     /gene="efp"
                     /locus_tag="PTC28_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000626504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HDK5715484.1"
                     /translation="MISVNDFKTGLTISVDNGIWKVIEFQHVKPGKGSAFVRSKLRNL
                     RTGAIQEKTFRAGEKVEPAMIENRRMQYLYADGDNHVFMDNETFEQTELSTDYLEYEL
                     KFLKANMDVHIQTYQGETIGVELPKTVELEVTETEPGIKGDTATGATKSATVETGYTL
                     NVPLFVNEGDVLVINTTDGSYVSRG"
     gene            11302..11763
                     /gene="accB"
                     /locus_tag="PTC28_000161"
     CDS             11302..11763
                     /gene="accB"
                     /locus_tag="PTC28_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HDK5715485.1"
                     /translation="MNFKEIKELINILDNSNLTEISIEDKGTTINLKKEKEIVTQQIS
                     APQQMVAPTVTAEPVQVNAASVDTPTTEADTSLKTITAPMVGTFYKSPSPEESAYVQI
                     GDQVTPDTTVCILEAMKLFNEIQAEVAGEIVEILVEDGQMVEYGQALFKVK"
     gene            11765..13120
                     /gene="accC"
                     /locus_tag="PTC28_000162"
     CDS             11765..13120
                     /gene="accC"
                     /locus_tag="PTC28_000162"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HDK5715486.1"
                     /translation="MRKILIANRGEIAVRIIRACHELGIQTVAIYSEGDKDALHTQLA
                     DEAYCVGPKQSKDSYLNIPNILSIATSTGCDGIHPGYGFLAENGDFAELCEAVQLKFI
                     GPSYESIQKMGIKDIAKEEMKRANVPVVPGSEGLVNTIEDAIQTANSIGYPVIIKATA
                     GGGGKGIRIARNEEELINGYKMTQQEAETAFGNGGLYLEKFIENFRHIEIQILGDEHG
                     NVIHLGERDCTIQRRMQKLVEESPSPILTEEKRKEMGDAAVRAAKAVNYFNAGTIEFI
                     YDLDEDQFYFMEMNTRIQVEHPVTEMVTGVDLVKQQIKVAMGEKLPYTQDDIQIQGHA
                     IEFRINAENPYKNFMPSPGKVEQYLTPGGFGVRIDSACYTNYVIPPYYDSMVAKLIVH
                     QPTREEAIMSGLRALSEFVVLGIDTTIPFHIRLLNHPVFNQGFFSTKFLEIYDIMNED
                     H"
     gene            13141..13515
                     /locus_tag="PTC28_000163"
     CDS             13141..13515
                     /locus_tag="PTC28_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HDK5715487.1"
                     /translation="MAKPIEHFNPNLGSVEIEPEVISVIASIAVSEVKGVEGVFPDLK
                     NSTLERFGRKNLSKGVKITTKDNEITIDVYCSLNYGVKVSETALKVQESIHSALRTMT
                     ALTPQQINVHITHIEMAKNNRD"
     gene            13536..13928
                     /gene="nusB"
                     /locus_tag="PTC28_000164"
     CDS             13536..13928
                     /gene="nusB"
                     /locus_tag="PTC28_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016425154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HDK5715488.1"
                     /translation="MSRKQARSQAFQTLFQLEMKNTELTIDEAISFIKEDYPDLDFDF
                     IKWLVSGVKDHQHVLDETISPHLNGWTIARLLKTDRIILRMATFEMNHSDTPEKVIIN
                     EAVELAKQFSDDDHYKFINGVLSHIKRN"
     gene            13937..15283
                     /locus_tag="PTC28_000165"
     CDS             13937..15283
                     /locus_tag="PTC28_000165"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HDK5715489.1"
                     /translation="MEKYLTISALTKYIKYKFDQDPHLQSVYIKGELSNFKRHSSGHL
                     YFAVKDENSVIAAMMFKTKANQLDFDPKEGDQVLIEARVSVYERRGNYQIYVNHMQLD
                     GVGNLYQKFEQLKNKLMKEGFFDPAHKKPIPKYPQKIAILTASTGAAIRDIQNTLNNR
                     YPLAQQIKISTLVQGAQAKADIIEKLQSADQLGADVIILGRGGGSIEDLWNFNEEDVV
                     KAIFSCQTPVISAVGHETDTTLSDFVADLRAATPTQAVMLATPDKQELKQVLYQTRAY
                     LNRYMKQHLKHTSQQLQQLQSYYKLKQPGLLYEQQIQKRDELDRALHQSMQLRLQHEQ
                     QRLAMLQQRIRIKYFYDNVQRQKQASIDLSSQLHKQIQRILTSKKQIFQHQLLSLDNL
                     SPTKTMLRGYSIVKKDDEVITSSHDIHEGERIEVTMKDGALDARIEKVRWQNDDRK"
     gene            15267..15491
                     /locus_tag="PTC28_000166"
     CDS             15267..15491
                     /locus_tag="PTC28_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002475215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HDK5715490.1"
                     /translation="MTTENKSFEEMMKELENIVNQLDHDTISLEKSLELYQQGIALSK
                     SCEKTLSDAEKKVAELMDKEADESNESKSE"
     gene            15472..16353
                     /locus_tag="PTC28_000167"
     CDS             15472..16353
                     /locus_tag="PTC28_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HDK5715491.1"
                     /translation="MNQSLNELLEQFNGHLNHAIEDSQLGTSLEQSMRYSLEAGGKRI
                     RPLLMLATIKMLDHQKLESGMHVALALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHTV
                     YGEWLAILAGDALLTKAFEKIALTPLIDAQIKVALIEKISQASGHQGMVGGQTLDMQS
                     ENQQISLEKLESIHIHKTGALIQFAIEAATIITSIRQTTAQQLIQFSQHLGVIFQIKD
                     DLLDVYGNEAKLGKPVGSDVTNHKSTYVTLLGEKGAEQELQAHIQKAEAILTTLSTEF
                     DTTDLNYLLTLFYQRQN"
     gene            16423..18291
                     /locus_tag="PTC28_000168"
     CDS             16423..18291
                     /locus_tag="PTC28_000168"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HDK5715492.1"
                     /translation="MDVRNIQNPSFLKSLSVKELEALSHDVRQFLIQTCAVTGGHIGA
                     NLGVVELTIALHKHFNSPEDKIIWDVGHQSYIHKILTGRGHQFETLRQYRGLCGFPKL
                     KESDHDVWEAGHSSTSLSAAMGMAKARDILGKKNHIVPVIGDGALTGGMALEALNNIG
                     HDRTNMTIILNDNEMSIAPNVGAMHNMLGRIRMNQGYNRLKFDAESILSRLPGGSRLR
                     ESADRIKDSLKYLVVDGAFFEELGIRYIGPVDGHSFEELENALAAADSINKPVLIHVV
                     TKKGKGYHPAENDKIGTWHGLGPYKLETGEQIKGQTQGPSWSQLMSDEILSYAKKDRR
                     VVAITPAMPVGSKLTKFQSELPEQFFDVGIAEQHAVTMAAGLAIEGMKPYVAIYSTFL
                     QRAYDQVLHDVDRQNLNVIFGVDRSGLVGADGETHQGVFDVGFLTQFPNMIVTMPKDE
                     NEAKNLVYTAMHHAQGPIAIRYPRGNGLGVEITDKREHLPIGTWEDLTEGQDVALISY
                     GPTLATLVEVAKTLAEQGIRARVINARYIKPMDTTVLGDLGAKNTPVVTVEEAMLNGG
                     LGSQIANYFTDHGYTNRIKRLGIDDTYIEHGDVEQILEDLGLTHDPLVHTIQQFLD"
     gene            18575..19027
                     /gene="argR"
                     /locus_tag="PTC28_000169"
     CDS             18575..19027
                     /gene="argR"
                     /locus_tag="PTC28_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ArgR"
                     /protein_id="HDK5715493.1"
                     /translation="MPKKSVRHIKIREIISNEQIETQDELVKRLNDYDMNVTQATVSR
                     DIKELQLIKVPAPSGQYIYSLPNDRRYHPLEKLGRYLMDSFVKIDSANNLLVLKTLPG
                     NAQSIGAILDQIDWEEVLGTICGDDTCLIICRDNPSADEIKERIFNML"
     gene            19041..20723
                     /gene="recN"
                     /locus_tag="PTC28_000170"
     CDS             19041..20723
                     /gene="recN"
                     /locus_tag="PTC28_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HDK5715494.1"
                     /translation="MLQSLSIKQFAIIDTLDIQFSDGLTVLSGETGAGKSIIIDAIGQ
                     LIGMRASSEFVRHGEKKAIIEGIFDIDDAKDAIRQLETLGIDINEDFLIVKREIFSSG
                     KSICRINNQTVTLQDLRQVMQSLLDIHGQHETQSLLKQKYHVELLDRYADGEYIEELQ
                     QYAQSYEQHQEKIKELEALESADQALLQRLDLMKFQYDELKEAQLKEGEIEQLEIDIK
                     RIQNSENLSLALNAAYVTLTDEHAITDRLYTLSSELQNVNQILPETFEKLKEEVDQFY
                     YTLEDAKHQIYEEINQTEFDEQYLNELESRMNLLNNLKRKYGKDISDLMIYQEKIADE
                     INKIENYEESTSKLREEIHQLSQQVQEDGEKLTKARRIVARQLRDRIVNEIQYLQMKD
                     ANLEISFKPYETPQKDGLERIEFLISPNKGEPLKSLNKIASGGELSRIMLALKSIFVR
                     AHGQTAILFDEVDSGVSGQAAQKMAEKMKDIASVIQVICISHLPQVASMSDHHLYISK
                     HEKDDRTTTTVRELTGDARIDEIARMISGATVTELTRENAKEMIEQNQKHKG"
     gene            20730..21623
                     /locus_tag="PTC28_000171"
     CDS             20730..21623
                     /locus_tag="PTC28_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate butyryltransferase"
                     /protein_id="HDK5715495.1"
                     /translation="MNFTDLLKEPQALTGTIAIVNATDEPLIRVIIEVLKQTEADFKL
                     YNNQDVAEIIRSFELSADFLKRIHIQTFDTEEAAIEGCLNDLHHGKAQILMKGQISTA
                     KILSAVLKRNAQGTKPFLNHVALCEIPSYHKLLMISDVALNIAPTEEEMKAIIQNLVD
                     FSKRLQYQQLHIALLSSVEKVSPKIPSTVQAERLSEYYQSHPIEPHVHVEGPFALDNA
                     IDKKSAIQKGIHSKVAGNADVLIVPGLDAGNVLYKSLTYFGRAKVASLILGAHFPIVL
                     TSRADSIENKINSILVALKVG"
     gene            22197..23255
                     /gene="buk"
                     /locus_tag="PTC28_000172"
     CDS             22197..23255
                     /gene="buk"
                     /locus_tag="PTC28_000172"
                     /EC_number="2.7.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="butyrate kinase"
                     /protein_id="HDK5715496.1"
                     /translation="MTTTLVLNLGSTSSKYAIYENDECKVNENISHTEAILKQPLIDQ
                     ESLRQQLIEDEIESQGYQLNQIDAIACRGGLLKPLEGGTYSVNEAMYDDLKSFKYGAH
                     ASNLSAMIGYQLGQKYNIPVFTTDPVVVDELIDEVRHTGVPSIQRRSIFHALNQKAMA
                     RRYAALVNRAYENMNVIVIHMGGGISIGAHEKGRVIDVNEALYGEGPMAMDRSGSIPN
                     DLLVQYMDKHQLSADEIKVQLSRESGLKAYFQTSDLREIMAKYEQDENVKLIIDTMVI
                     QIAKVIGERAVVLKGHVDQIIFTGGMSHSVQLMDQLAKYIEWIAPISVFPGEHELITL
                     AERAQLALNQQIKIEIYQ"
     gene            23266..24684
                     /gene="lpdA"
                     /locus_tag="PTC28_000173"
     CDS             23266..24684
                     /gene="lpdA"
                     /locus_tag="PTC28_000173"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HDK5715497.1"
                     /translation="MTKEKYDIVILGGGIAGYSAAIRASQLGKSVAIVEKSKMGGTCL
                     HQGCIPTKSFLKSAEVFQYVQHADDFGVTAEQPTFNFSKVMERKNRIVDTMYQGLQGL
                     MKRHKIDVFHGVGRLMGASIFTPQSGTVSVEYEDGTSELLPNDYVLIATGSKPMALPF
                     LPFDQQQIYSSNDMMTLETLPQSITIIGGGVIGLEFASFFSSVGVTVHIIEAGPRILP
                     TENAQISQLIQKQLEEQGVNFHINTVLKGDDIQQSDEEVTFNLENPFSTEKVLVAIGR
                     QVNTADLGLDNTKVVLNDKQMIETNEYMQTADTHIYAAGDVIGHLQLAHVGAREGVIA
                     VEHMFNENPLPVDYDLMPRCVYTSPEIASIGVNQETAKQRGLKFEVMKAPFKANGKAT
                     ITTSSISEGFAELLFDQASGSLIGASLIGPHVTELINELSVLQFMNGSALELGLSTHA
                     HPSISELLMELGLKSNHQSIHI"
     gene            24706..25704
                     /locus_tag="PTC28_000174"
     CDS             24706..25704
                     /locus_tag="PTC28_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HDK5715498.1"
                     /translation="MKDYQSVGLEIEDLKNMYRAMDLGRKLDERMWLLNRAGKIPFVI
                     SCQGQEATQIGTAYALQKGDIASPYYRDLALVTYLGMTPLETMLSAFGKRDDISSGGK
                     QMPSHFSKKEVGIMSQGSSVATQILHAVGAALTFKMDGKSQIALTTLGEGSSNQGDFH
                     EGLNFAGVHNLPFICLIENNKYAISVSKEFQYGAKYLSDRAKGYGMFGETIDGNDPIA
                     VYGAIKKARERAVNGEGASLIEAMCTRLTAHSSDDDDRYRTVEEKNADKENDCNLKFK
                     QYLIDQSLVDETWFESIEKENQQWVHQATKEAEAAPYPDPSETYLHVYEEGGRQHG"
     gene            25697..26680
                     /locus_tag="PTC28_000175"
     CDS             25697..26680
                     /locus_tag="PTC28_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HDK5715499.1"
                     /translation="MAKISYLEAIRQALDVALEKDAQTMILGEDVGKKGGVFGVTAGL
                     QEKYGVYRVLDTPLAESNIVGSAIGAAMMGKRPIAEIQFAEYILPATNQIMSEAAKMR
                     YRSNNDWQAPLTIRAPFGGGIHGALYHSQSIESVFTSTPGLTVVIPSTPYDAKGLLLA
                     SIASNDPVLFFEHKKAYRLLKEEVPEGYYTVPLGKADVKRQGSDITVFSYGLAVNYCL
                     QAADLLKGEAIDVEVVDLRTVYPLDQQTIIECAKKTGKCLLVTEDNKEGSVMSEVAAI
                     IAENCLFDLDAPVMRLAGPDVPAMPFSPPLEDEFMINPDKIKNKMRELAQF"
     gene            26693..27967
                     /locus_tag="PTC28_000176"
     CDS             26693..27967
                     /locus_tag="PTC28_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000406833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HDK5715500.1"
                     /translation="MEIKMPKLGESVHEGTIEQWLVQEGDRVEEYDPLCEVITDKVTA
                     EVPSSYAGTIKKIIAAAGDTVEVGSVICEMEVEGDTDEATENVAPEADATTTEQTNVP
                     PAPPSTENQSKNNGRFSPVVFRLASENNIDLSTVTGTGFEGRVTKKDIERAIEQGTTT
                     PKENAVPQETVERIAPTSPVAKQNHHTLTTSDRDSVIPVNGVRRQIANKMVQSVHEIP
                     HAWMAVEVDATELTKTRAHYKNQFKAQEGYNLTFFAFFIKAVAEALKKYPLLNSTWQE
                     DEIVVHSDINISIAVAHENKLFVPVIRHADEKSIKGIAREIHELAQKARQNQLSYEDM
                     QGGTFTVNNTGTFGSVHSMGIINHPQAAILQVESIVKRPVVIDDMIAIRSMVNLCLSL
                     DHRILDGLQAGQFLNEVKQRIEAFTVEHTHVY"
     gene            28192..28629
                     /locus_tag="PTC28_000177"
     CDS             28192..28629
                     /locus_tag="PTC28_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrxA/BrxB family bacilliredoxin"
                     /protein_id="HDK5715501.1"
                     /translation="MDMNFDLYMNNIVKQARSEMDHAGYEQLATEEDVDRVFKQDGTT
                     LVMINSVCGCAGGIARPAATHALHYDVLPDRLVTVFAGQDKEATQRARDYFEGYAPSS
                     PSFALMKDGKITEMIERHQIEGHDTMDVITQLQALFDRYCNAK"
     gene            28640..29617
                     /locus_tag="PTC28_000178"
     CDS             28640..29617
                     /locus_tag="PTC28_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002476807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HDK5715502.1"
                     /translation="MLRLNPYRIGLRTIKTAVGMALGVIIAQLLGLDNYASSAILVVL
                     CIKDTKIHSVHAIISRFISCLIAIGFGWAIFPLLGQHAWVLGLIVLFFIPVTVMINMQ
                     EGVVTSIVILLHFFNADVIDFSLVVNEVLLIIVGLAIAFTMNTIMPNLDHQLSKYKKE
                     IEFQFKSIFHTFSSACAMHNNRPDVTFNSLAHTIQEAKSIAFRDVKNHFVRNENSYYH
                     YFDMREDQLEILKRIKNHIRHINANDVMSAHVAQLFHEMAENVNENNYTALRLHTLYQ
                     IRLEIDQLPLPQTHEELLTRSSMIQILYDTEEYLTIKAKFGSLKMHHEI"
     gene            complement(29674..29775)
                     /gene="prli42"
                     /locus_tag="PTC28_000179"
     CDS             complement(29674..29775)
                     /gene="prli42"
                     /locus_tag="PTC28_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stressosome-associated protein Prli42"
                     /protein_id="HDK5715503.1"
                     /translation="MLNKKIRKVLIIVMLVAIVLALILTGIAPLLSM"
     gene            29946..31061
                     /locus_tag="PTC28_000180"
     CDS             29946..31061
                     /locus_tag="PTC28_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HDK5715504.1"
                     /translation="MLNKDRLIETFLELVQIDSETGHEDIIQPILKDKFESLGLSVVE
                     DNAKATTGFGANNLICTLPANRENKDKIYFTSHMDTVEPGRNVKPIIKEDGFIYSNGT
                     TVLGADDKAGLAVIFEVLHIIHEQQLPHGQIQFVITVGEESGLVGAKALRKEDLDADY
                     GYAIDSAVPVGSITIGAPYQMKVNATIHGKKAHASTPNEGISAINIAAQAISQMKLGQ
                     IDHETTANIGKFQGGGPTNVITDLVNIWAEARSHAKDKLDAQVQHMKETFEHAAAQHH
                     CHAEVETELSYPGFHVESDERVYQVAEQAANALGFEMQADVGGGGSDGNIINHLGIPT
                     VILGVGYEKIHTTDERISKQSLYDLTNFVLKIIEMNA"
     gene            31135..32538
                     /gene="gndA"
                     /locus_tag="PTC28_000181"
     CDS             31135..32538
                     /gene="gndA"
                     /locus_tag="PTC28_000181"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HDK5715505.1"
                     /translation="MTQQIGVVGLAVMGKNLAWNIESRGYSVSVYNRSADKTDLMVEE
                     SKGKNIVPTYSVEEFVNSLEKPRKILLMVKAGEATDKTIDSLLPLLDDDDILIDGGNT
                     NYLDTIRRNKALAESGINFIGMGVSGGEVGALTGPSLMPGGQEAAYHKVSDILESISA
                     KAKDGKPCVTYIGPNGAGHYVKMVHNGIEYADMQLIAESYIMMKDLLGMSHEEISETF
                     KSWNAGELESYLIEITGDIFTRLDEDGEPLVEKIMDKAGQKGTGKWTSINALELGAPL
                     TIITESVFARFISSLKDQRVNASKVLNGPSAAFDGNKEEFLEKIRRALYMSKICSYAQ
                     GFDQMKTASEINEWNLQLGDLAMIWREGCIIRAQFLQKIKDAYDNDNNLQNLLLDGYF
                     KDIVTEYQSALRDVVATGIQNGVALPGFSASINYYDSYRTENLPANLIQAQRDYFGAH
                     TYQRKDQEGTFHTQWTK"
     gene            complement(32596..32871)
                     /locus_tag="PTC28_000182"
     CDS             complement(32596..32871)
                     /locus_tag="PTC28_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715506.1"
                     /translation="MIIGIVLIGIAIPIDNVPFQIMIHKTIDEDYKSRVFALLQSLAT
                     GLNPLGLIFFGFVIPYSYGLVFLISGICMIFVMLYFIKNYHEHELQS"
     gene            complement(32871..33203)
                     /locus_tag="PTC28_000183"
     CDS             complement(32871..33203)
                     /locus_tag="PTC28_000183"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715507.1"
                     /translation="MAESFKYVFKNRNLSTLFLTSSVINFLEQSLTVGLPIIIVTQLG
                     YSSAHLGTMESILGVALLLTYITLNFFNMKNNLKKLSVLSKLILIVSLFVIASSNFFI
                     AISFWRIL"
     gene            complement(33517..33789)
                     /locus_tag="PTC28_000184"
     CDS             complement(33517..33789)
                     /locus_tag="PTC28_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715508.1"
                     /translation="MMQKSVILILFSTISTMFSDIFTFACGFYVLQLTGSGSLFGTYL
                     SILAIIQVLTMPIFGNMIDRHSNQKVLILGQVLSVVTLFIFFNGIS"
     gene            complement(33968..34825)
                     /locus_tag="PTC28_000185"
     CDS             complement(33968..34825)
                     /locus_tag="PTC28_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDK5715509.1"
                     /translation="MDVIKHLQRAMVYIEDHLLEPFDLQTLSEYVEISPYHLEQSFTM
                     IIGKTPQEYCRARRLTLAANDLIHGANRLIDLAKRYQYADANTFAHDFSDYHGVSPLQ
                     AKLKKDQLQMQERLYLKLSTTSQKPYPYRLETLGDFSLVGCSRFVPSAELEHHFIIPD
                     FLEDLKMDGTLKDIIRYNDIGPHELFVVSCPLEQGLEIFVGVPSERFPGHLEDRFLAG
                     RQYAVFNLQGEIDFVTSEAWHYIETSLQLTLPFERDALYIEIYPLDISFEDPFTKVQL
                     CVPVNIDEN"
     gene            complement(34966..36450)
                     /locus_tag="PTC28_000186"
     CDS             complement(34966..36450)
                     /locus_tag="PTC28_000186"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HDK5715510.1"
                     /translation="MNKTINHVPALITIFGATGDLSHRKLFPSLFHLYQQDNLDERVA
                     IIGIGRRELTNDDFRAQVKSSIQEHVQDTKHLDKFMQHVFYQPHDVSDEESYQKLLEL
                     SESLDREFSLDGNRVFYLAMAPRFFGVVTDFLKSSGLTNTKGFKRLVIEKPFGSDLKS
                     AEELNEQIRRSFKEEEIFRIDHYLGKDMVQNIEVLRFSNAMFEPLWNNKYISNIQVTS
                     SEVLGVEDRGGYYETSGALKDMVQNHMLQMVALLAMEPPISLNSDDIRAEKVKVLKSL
                     HVLQPDEVRNQFVRGQYDQGFINGQEVKAYREEDKVAADSTTPTFVSGKVEIDNFRWA
                     GVPFYIRTGKRMKRKSIQVVVEFKEVPMNLYYQKDKHLDSNLLVINIQPNEGVSIHLN
                     GKKYVQGIETEPVQLSYAMSAQDKMNTVDAYENLLYDVLKGDATNFTHWEELKSTWKF
                     VDSIQQAWDHFEPEFPNYESGTNGPLDSDLLLSRDGFKWWNDIQ"
     gene            36606..37523
                     /gene="rnz"
                     /locus_tag="PTC28_000187"
     CDS             36606..37523
                     /gene="rnz"
                     /locus_tag="PTC28_000187"
                     /EC_number="3.1.26.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Z"
                     /protein_id="HDK5715511.1"
                     /translation="MEITFFGTSAGLPTKERHTQSIALKLEPYATDVWLFDVGEATQH
                     QILHHSIKLGKVSHIFITHMHGDHVFGLPGVLTSRSFQGGESKPLTVIGPKGIKDYVE
                     YNLSLTYSHLNYPLHIIEIEDQMNLSINGFEVNARPLNHGIPCFGYRIQAPDTPGKLD
                     VQKLQALGMPPGPQYQKVKSQDTFEFEGQIYNANDFKGPDKKGQVVTIFGDTRPSQYA
                     LELAKDADVLVHESTYIDGDKTLANAYHHSHIEDVLALIEKASVKHGLLTHISSRYMK
                     EDINEIETKLKVHSPLSFQFVEDFDSYQF"
     gene            complement(37648..38463)
                     /gene="proC"
                     /locus_tag="PTC28_000188"
     CDS             complement(37648..38463)
                     /gene="proC"
                     /locus_tag="PTC28_000188"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HDK5715512.1"
                     /translation="MKIVFYGAGNMAHAIFTGILNSKVVPADNIYLTNRSNEDMLKEY
                     EEDLGVQYSYDDAALLKDADYIFLGSKPHDFDQLADRIKLHVEPNNRFISIMAGLPIS
                     YIKEKLDTTNPIARIMPNTNAHVGHSVTGVSFSSNFGGKAKDEILEIINAFGTALEVQ
                     ENHLHQVTAITGSGPAFLYHVFEQYVIAGTKLGLEKSQVEESIRELIIGTSKMIERSD
                     LSMEQLRKNITSKGGTTQAGLNALSEYDIEGIFEDCLNAAVNRSIELSAQDDD"
     gene            38549..39304
                     /locus_tag="PTC28_000189"
     CDS             38549..39304
                     /locus_tag="PTC28_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HDK5715513.1"
                     /translation="MQQGHFLITGGTSGLGYALAQALISAHFSITLLVRDVNKARSLF
                     PNSEVQIIQCDLTTESDVNQIARHFNNQTQFDGVIHSAGLGYFKGLLEHTPVEILQTY
                     QVNVVHFSMLINQCAPFLTKHASIVGISSQAALATQPYAAHYGGSKAAFNHVLNALRI
                     EQPQWHVLNVNVGPIETPFHAKADPSGRYARKMKKIMLNPEQLAEKIVHAIQHRQQEL
                     NMPQSVHFLLKLYQLAPRFFEKIGRPFFLGKKH"
     gene            complement(39301..40221)
                     /locus_tag="PTC28_000190"
     CDS             complement(39301..40221)
                     /locus_tag="PTC28_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDK5715514.1"
                     /translation="MQKNVLKSGIELSELGLGCMSLGTEENKAEEIIDAAVTAGITYF
                     DTADIYDQGVNEKIVGRTLKKYQNRDDIVIGTKVGNHLKENGETFWDPSKRYIKGNVK
                     NSLQRLGLDTLDLYMLHGGTIDDPLDETISAFDELKQEGVIRAYGLSSIRPNVIRYYL
                     QYSQIETLMTQFNLIDNRPIDLLDEVQDKGVKLLARGPVFKGLLTPSAEKVLTTKFAE
                     GIFDYDHHALKETVTALQQMNPELTGLAFNYLKSFDVLGSIIVGASSVEQLQQNVTHY
                     HQEVNPAHLEQASDIVKHLHYAQHWEMPNS"
     gene            40301..40843
                     /locus_tag="PTC28_000191"
     CDS             40301..40843
                     /locus_tag="PTC28_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HDK5715515.1"
                     /translation="MHFEEKTISKESIYKGKIIEVEKHKVSLPNNETAYREVVKHNGA
                     VAICALTPDQQVILVKQYRKALEQELLEIPAGKLEPGEDRESAAMRELEEETGYKAKK
                     LTLIGEVYGTPGFSNEKISVYFADNLVEGKVNLDEDEFVEKVLYSLDDVKKAVEARTI
                     EDAKTFIAFQHLLLHYNHSK"
     gene            40948..41403
                     /locus_tag="PTC28_000192"
     CDS             40948..41403
                     /locus_tag="PTC28_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HDK5715516.1"
                     /translation="MEERLNRVKQQLQQSSYKLTPQREATVRVLIENEADHLSAEDVY
                     LKVKEKAPEIGLATVYRTLELLADLKVVDKVSFGDGVSRFDLRKEGSKHFHHHLVCME
                     CGRVDEIEEDLLPQVEERVENEYNFKILDHRLTFHGICETCQKEGKGAK"
     gene            41443..42330
                     /gene="xerD"
                     /locus_tag="PTC28_000193"
     CDS             41443..42330
                     /gene="xerD"
                     /locus_tag="PTC28_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016425129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HDK5715517.1"
                     /translation="MEEIRDEYLRFIQIEKGLSNNTIAAYRRDLNHYLNYLAEHKVAN
                     LNFVDRQMIQEWFGFLHDEGRSAKTIARFTSTIRSFHQFALRENYTSHDPTVLIETPK
                     YDRKLPDVLSIAEVEQLLMAPDESKVNGYRDKTMLELLYATGIRVSELINIEVEDINL
                     MMGFVKVFGKGSKERIVPLGETVIDCLTHYIQNIRPQLLKHTVTHVLFLNLHGKPLSR
                     QGVWKMIKQTGVKAGIMKRLTPHTLRHSFATHLLENGADLRAVQDMLGHSDISTTQLY
                     THITKNQIRKIYQDYHPRA"
     gene            complement(42617..43123)
                     /locus_tag="PTC28_000194"
     CDS             complement(42617..43123)
                     /locus_tag="PTC28_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF309 domain-containing protein"
                     /protein_id="HDK5715518.1"
                     /translation="MLENDLVHFYYQFHHEQHYFLCHDILEEAWKMQHAFSKQDAVVS
                     LILLATGSYHYRRGNFKGAHKTFNKAYQIIVNYSEETMATLGLVRKAYLNILTQLIQD
                     TAQEIPFSPIQLPLTATMIVKVKTQFPGFQVTDTVVETPMILHHHQLRDRSDVITARE
                     AALEERRK"
     gene            43218..43946
                     /locus_tag="PTC28_000195"
     CDS             43218..43946
                     /locus_tag="PTC28_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HDK5715519.1"
                     /translation="MYEVKLDAFNGPLDLLLHLINEFEIDIYDIPMRELTEQYMQYVH
                     AMKKLEINIASEYLLMASELLMIKSKMLLPDTSSDLVEDEDPREALVEKLIEYQNYKA
                     YSEMLEEKRQAREHYFTKPPTDLSHYEYSERLPENTTIDLTKLIVAYQKMKTRVSLKK
                     PTTVDIRKETYTIQQSTTYIYDKLKKVPQITFFDLFTFNESIEHVVTHFLALLEMSKT
                     GMIQLQQVKAFHNFEIRKGVNYDA"
     gene            43936..44478
                     /gene="scpB"
                     /locus_tag="PTC28_000196"
     CDS             43936..44478
                     /gene="scpB"
                     /locus_tag="PTC28_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002483233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HDK5715520.1"
                     /translation="MTLKVTEALTAILYTVGEDGIDEAQLLASLDVDYETLNRAIDTL
                     ELPGLMVQKFGQTYVLTTQKEAEPYIESLIINKASTKLSQAAMEVLAIIAYNQPMTRN
                     DIELIRGIQSDGPVKTLIAKGLVEPKTNPEARGQQLFTTDLFLNVFGLESLEALPTTD
                     EEEEEIESFFSQLVNQKGDS"
     gene            44479..45225
                     /locus_tag="PTC28_000197"
     CDS             44479..45225
                     /locus_tag="PTC28_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HDK5715521.1"
                     /translation="MSQQLERLQKRIANSGYTSRRKAETLIEEGKVQVNGKTVTELGT
                     KVRPSDEVTVEGIPLEQEDKLYILFYKPAQVITSVSDDRGRKVVTDYFDDLVTRIYPV
                     GRLDYDTSGLLLLTNDGEFTNLMTHPRYKIPKTYVAKIEGYILREQVKQLEKGIQLED
                     GLTQPAKVKVKKQNKEKNTSLVEITITEGRNRQVRRMFEHFGFSVQKLSRVSFGPLTL
                     KGLGAGEGRVLSPHEVKSLRHLAENGQQQR"
     gene            45337..46059
                     /locus_tag="PTC28_000198"
     CDS             45337..46059
                     /locus_tag="PTC28_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002449874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDK5715522.1"
                     /translation="MTNEILVVDDEHRIRKLLKLYLEREGYVIAEASDGREALDMATK
                     YDYSCILLDLMLPEMDGLEVAVKLRELKDTPIIMLTAKGEENNRVEGFESGADDYIVK
                     PFSPREVVLRVKALLRRTESSKAEQNEPHARDMIEFKHLTIDNDAHKVLADGTPVNLT
                     PKEYELLIFLAKTPNKVFDREQLLKEVWHYEFYGDLRTVDTHVKRLREKLNRVSADAA
                     KMIQTVWGVGYKFEVSKSDETT"
     gene            46046..47803
                     /locus_tag="PTC28_000199"
     CDS             46046..47803
                     /locus_tag="PTC28_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HDK5715523.1"
                     /translation="MKRLNNVVVKLWLTIILIVTTVLILLSAALITFFQYYFTQETER
                     ALYQSAENVNQVLLKNDNRKLAIEHSEALLEDNKGLIILPDRAHINEKDTVKKKMLKE
                     ISEHPNFDRVLKNNHSELQHVTFKIDGKTHTYVLLGYPSKDNNGQSSAIFIYQDLKSI
                     DDTNNIITVMILITAVVFLAITTVFAFFLSTRITNPLRQLKTQAKEVARGNYDKRVPI
                     QTRDEIGELAMTFNKMSRSIQTHIDALTTSKNIRDTLINSMVEGVLGINHKKQIIISN
                     ALAERMLSEFNESDREMFNLQIEDTFESQKTEYREYEMNQRFYVIIMSHIKKIQTNGE
                     GGLVAIVRDMTNEHELEQVKKDFIASVSHELRTPISLLQGYTESIVDGVVTEPEEINE
                     FLTVVLDESKRLSRLVNELLNVAKMDAEGLNVTQELQPMQDLVRKMAMKYRQQAQELN
                     LTLDFQMDGEMASLWYYDFDRMEQVLTNLVDNASRYTQPGDTISIKATADHDHQILTI
                     EDTGVGIAPQHLEKLFERFYKVDSARKRGSQGTGLGLFITRMIVNAHGGHIRVESELD
                     KGTKFIISLPKKSHVEEID"
     regulatory      47959..48097
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            48163..48708
                     /locus_tag="PTC28_000200"
     CDS             48163..48708
                     /locus_tag="PTC28_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HDK5715524.1"
                     /translation="MKQKQTKRMITVGMLSAIAIVLTFIKFPLPFLPPYLTIDFSDAP
                     ALLATFTLGPVAGLLVELIKNLLNFFFNLSDPVGPIANFLAGASLLLVSYGIYRNNQS
                     TKHLILGLITGTIVMTIVLAVMNYFVLLPLYGMIMNLTDIANNLKLIIAAGIIPFNII
                     KGALISIIFILLYQRIGHILK"
     gene            complement(48971..49219)
                     /locus_tag="PTC28_000201"
     CDS             complement(48971..49219)
                     /locus_tag="PTC28_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002449743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HDK5715525.1"
                     /translation="MAKYTIVDMDTCIACGACGAAAPDIYDYDDEGIAYVILDDNQGT
                     TPVPEELYEDLEDAFEGCPTDSIKVEEESFDGDALKFE"
     gene            49321..50268
                     /locus_tag="PTC28_000202"
     CDS             49321..50268
                     /locus_tag="PTC28_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDK5715526.1"
                     /translation="MKQLILYLYHHASAYKTKKSIFNIIIGKKSHQTFFDAVSLNILS
                     LYGCAPKLKYEQLEQMISHESYHHTTIQTSNRMTYSTLDATFKAFQLLVQTVSHIQHN
                     QRTFLPITSQVDIHEVVRLIYYEIEQQQLQDAFEEEVTTLFKMLSEKHDTLYTHYLLT
                     GYDEPMYTFAQISMIESIDIHDLYTAYYEELLSIYLFIQNADTFPILSQCIMPIELSD
                     RVMQTLQLLQKGYSIAKVAQIEQVRETTIKDHILDLFMKQLLTNYDDFFTHPYNEFLK
                     FYQAHPYQRLKLYKEQFDTLSYFELKLAIIGSAKGELHA"
     gene            50261..51637
                     /locus_tag="PTC28_000203"
     CDS             50261..51637
                     /locus_tag="PTC28_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HDK5715527.1"
                     /translation="MLKDALKQYFGFTTFRPGQESIISSVLEGQHTLGILPTGSGKSL
                     CYQLPTYMKQQPTLVISPLISLMDDQVMQMKMQGEHHVVAIHSGMEQAAKKRAFQQLT
                     QARFIFVSPEFILQPHHFHLFKNIRFGMIVLDEVHCLSEWGFDFRPHYALIGKVIRYF
                     NEATILALTATATRHLKDDIQRVIQKSIHVIEHSMDRPNVALSVKFMLSYEEKVNWLI
                     DTIATSGPTIVYVSSKKVSLDLATSIYEAGYLTGIYHGDLSYQERHTVQQQFLNNDIR
                     IIVATSAFGMGVNKPDIRTIIHFHVSTTPSSYLQEIGRAGRDGLPSQAIALFQPDDQY
                     LMETLALVNIMHASDVDQYEVGQMIDSEKRAILDVLTEAFSFQQLRQIFTQNEDMKRQ
                     GYRHMYHYILTKQCRRQHLLNYFGMTKETTDACCDQCEALSPVYEKNKKKVKRKLTYI
                     EKLENLFH"
     gene            51812..53167
                     /gene="ebpS"
                     /locus_tag="PTC28_000204"
     CDS             51812..53167
                     /gene="ebpS"
                     /locus_tag="PTC28_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elastin-binding protein EbpS"
                     /protein_id="HDK5715528.1"
                     /translation="MSKDNFKDEFERSRQEIKSHHHDEDETTEAINEKDDQPQASQEQ
                     QFPPRNASRRHRKRDFGISKAKPTQKDTQTNPQEAAADKKTGPIGGVKKSDDNHLNHT
                     QHDAEGKRAQTADSMQNEPAKEDTKGQRAATSGHTAVGTGANVQMTNNKKQQPKVTNE
                     AQSNQQGEQQEPRKSKKALATGAGLGATGVARAGMEKNDQSPKQDENPTLEDSKPQGN
                     KGKKAAAGVSTGAATGLGASKAHAQQTPERQPETESSETTVSNGSGGGFFKKLLPLLA
                     AIILLGTVAIFGGMYLFNQDHQNDNQQEVAQKEDTKKNSDDNQQSQSKNEDDKQDDSD
                     KATASKDSDDNSKDDNDQSESDANNSDNSNASDPNETSNPNNSQNDVNNSNINNQQNT
                     YQQGQSAGGQTHVVNGNQNLYRIAIQYYGNGSPENVEKIKRANGLQNNNISNGQQLII
                     P"
     gene            53413..54399
                     /locus_tag="PTC28_000205"
     CDS             53413..54399
                     /locus_tag="PTC28_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpdA family putative bacillithiol disulfide
                     reductase"
                     /protein_id="HDK5715529.1"
                     /translation="MKTVESIIIGGGPCGLSAAIEQKKKGIDTLVIEKGNIVDAIYHY
                     PTHQTFFSSSDKLSIGDVPFIVEELKPRRNQALVYYREVVKHHQLKVNAFEEVLTVKK
                     MHDHFTLTTTKDVYQCRYLTVATGYYGQHNTLEVEGAELSKVMHYFKEPHPYFDQDVV
                     IIGGKNSAVDAAIELEKAGARVTVIYRGETYSPAIKPWILPNFESLVRRGNVQMHFNS
                     QVTKITEDQVMFEKEGETITIDNDYVFAMIGYHPDYDFLQSIGIDIHTNEYGTAPVYN
                     SETYETNIENCYIAGVIAAGNDANTIFIENGKYHGEAIARHILTKKQSPLES"
     gene            complement(54696..55664)
                     /locus_tag="PTC28_000206"
     CDS             complement(54696..55664)
                     /locus_tag="PTC28_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HDK5715530.1"
                     /translation="MKNLLVIHTGGTISMSEDESNKVMTNDDNPITHHQDVIAQYANI
                     DEQVPFNVPSPHMTIDNVKILKEIIEDPDHLTHYDGYVITHGTDTLEETAFLLDLTIS
                     TSKPVVITGAMRSSNEIGSDGLYNFISAIRVAIEEESAGKGVMVVFNDEIHTARNVTK
                     THTSNTNTFQSPNHGPLGVITKAGVYFHHRPYARQFLTNINASLQIPLIKAHMGMGCE
                     MLDFYAERHVDGLVIEALGQGNLPPTAMPGVNACLDKNIPIVLVSRSFNGIVSAVYAY
                     EGGGHQLFEKGVIFSNGLNGQKARLKLLVALSNDFQHDQIQDYFNV"
     gene            55738..56397
                     /locus_tag="PTC28_000207"
     CDS             55738..56397
                     /locus_tag="PTC28_000207"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HDK5715531.1"
                     /translation="MKAINIALDGPAAAGKSTIAKRVAAQLGMIYVDTGAMYRAITYY
                     YLNNKERFTDFTSLISEIDLRLGYDAEKGQRVFLNDNDVTDFLRENDVTQNVSYVSSI
                     KEVRQFLVQVQQKLAADKGIVMDGRDIGTTVLPDAEVKVYMIASVEERAERRYKDNQE
                     RGIESSIEQLKKDIAERDAYDMNREISPLKKAEDAIEIDTTGLSIEQVTDKILSLVNA
                     V"
     gene            56486..57670
                     /gene="rpsA"
                     /locus_tag="PTC28_000208"
     CDS             56486..57670
                     /gene="rpsA"
                     /locus_tag="PTC28_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HDK5715532.1"
                     /translation="MMTEEFNESMINDIKEGDKITGEVQQIEDKHVVVHVNGGKYNGI
                     IPISQLSTYHVENANEVVKVGDEIGAYVTKIEVDEENETGSYILSKRKLEEEQSYAYL
                     QEKLENNETIEAKVTEVVKGGLVVDVGQRGFIPASLISTDYIEDFSDYEGRVLELKVE
                     ELEPEKNRVILSRKAVEAEENEKKKAELLQSIKAGDVIEGKVARLTNFGAFIDLGGVD
                     GLVHVSELSHEHVKSPEEVVSIGDTVKVKVRSVEQDSERVSLSIKDTLPSPFETIQEK
                     YSEGDIVEGKVMRLASFGAFVEISSGLQGLVHISEISHKHIGTPGEVLEPGQTVQVKI
                     LGINPEEERISLSIKAANPDEETEEASEETTQHYTQPADENENNPTLGDVFGDKLKDL
                     NL"
BASE COUNT        19411 a        10136 c        11045 g        17120 t
ORIGIN      
        1 ccaaaaggca aacctgtttt tacaatatat cggacacaca ttgaaagaac atcttcagca
       61 aggcgaatct ttttctcaca tattacttca attagactgt tttgaacctc aatttataag
      121 ctatatcaaa caaggtgaaa aacgagataa attggatatt gagttagaag tctatagcac
      181 attcttgttg gagcgtatag aagcaatgat tcaccagcac atcaaatgga tccaacctat
      241 catgttcgca tttattggta ttttagtgct atctgtctat ttaattatga tgttacctgt
      301 ttttgaaatg atgcaagcta ttaaagaata ggagcgattg acaatgattc aacaacttaa
      361 attaaaattc aacaaaaaga aaggttttac attaattgaa atgctacttg ttctgttaat
      421 tattagtgta ctattgattc tcattatccc gaatattgct aagcagtcag atcatatcca
      481 aaaaacgggt tgtgctgcac aattaaaaat ggtcgatagt caaatagaag cctatgcttt
      541 aaagtttaac cacaaaccga atacgattga tgatttagtt cgtgaaggct acattaaaga
      601 aagtcaaaaa acatgcaaat caggtgaaga gatcacaatc agagatggcg aagcagttgc
      661 gtcatgatgg ctttacactc attgagatgc tgttagtact cgccattatc tctgtcttta
      721 tttccataac tatggcgcat ccccaattca acttgttcca taatacgaca gaatatgaga
      781 tcaaaaaact gacaagtgaa atcgactatt atcaagcgta tgccattaag agtcacgcgc
      841 ctgtcatgct actttttcgt cctaaccgta acgatattaa aattgagaca attcacccac
      901 accgagtgac tacgattcca cttgcaccgc ttcaattaaa gatgacttca aatattcatg
      961 cgctcatttt tgataaagac ggaaaagcga atcaatttgg cacattacgt tttgaacatc
     1021 aacagcgtgc cttttctctt attttccata ttgaacaagg gaggtaccgt atatcttatc
     1081 aatagtaaac aagttcaaaa taacatcagg ctttgttttt atagaaagtc tttttgcgat
     1141 gtttctcctc agtatcatga ttttacagct tcttcctatg acgcaccaaa tggtcaaaac
     1201 atatcgtgaa gcggtggaag atttaacgtt aaaacgtaca ttgtttgaag tcattcaaca
     1261 tcaaattcca gaaaagaagt tgacggtgtc tcattatgaa attattccga cagcacatca
     1321 attgtgtata caaaatcatc aaaccaaaca aaaatattgc tatcgaaaag cagggcttca
     1381 cgctcattga aagtctcgtt gctctagtaa ttcaaatgac tattgtatta ctcataccct
     1441 tacttatttt cagtttaggt caattaaaaa cgacagtatt tgaagatcga acatatgata
     1501 tcgaactgat gattaaggat atctcacata cacttcatgc taaagatgta aaagcaaaga
     1561 tgattaaaaa gaaagaacta gaaataagag attcgaatac agagattaat tacaaattgc
     1621 gcaatcaaaa aattataaaa actgttggtc atcgaggaaa tattacgatg tgtaaccatg
     1681 ttgtagacgt tcactttgaa aaattaactc atgatttaat gctaatgaaa ataacctacc
     1741 aggaagggac tacaacacat gaaagagaga ttctattgta aacacggctt taccttgcca
     1801 ttattgttta tcattttatc tgcatatttt gcttttatct ctttttattt actgatttat
     1861 agtctaaaat tacaaactat agatgcgctg tcagatgact atgaatatca aatagcgcga
     1921 attatcgaca aaggtgagta atatatgaaa ttaaaaatgg atacacctct tctattcatc
     1981 ggatttatgg gtgcaggtaa aacaaccatt gcagaaacac tagcagagag ttatcaatgt
     2041 tcattcattg atttggatgc ttatatcgaa actgaaacgc aaaaatcaat tccacaaatt
     2101 tttgaagaag aaggcgaaca aggttttaga cggcatgaat ttgaatgttt agaaaaagca
     2161 atacaatcct atgatattat tgcgacaggc ggcggcattc tcacttatga cgcgacgtat
     2221 caatttctta aagaagcaga agtgaaagcc atatgggttg atgcaccgat tgaagcactt
     2281 tatgaaaggg ttaaagacga tacaaatcga cctaatgcta ataaaaaaag tttcgaatct
     2341 ttaaaacact tgtattcgac gcgtatttca agatataatg aaatcgcatt cattaagatt
     2401 tcatcagcag caccgttatc agaaacgctt aatgaaatta aaattaaatt gtctgcgaat
     2461 gatcaatatt agagagtatg ggtacgactc atcaccgaag gagcaagtaa tgatagatta
     2521 cgaatctctc aggtaaaagg ataatattgt gacgcattcc tgaaggcatc tcaacagggg
     2581 agtatgaagg tactcctctg ttttttatta cacattagga ggggactaca tgtcagaaga
     2641 actcaagaaa acgtcacttt accaacatta cgttgatgca ggggctaaaa ttgttgaatt
     2701 tggtggttgg gcgatgccag ttcaattctc aagtattaaa gaagaacaca acgcggtacg
     2761 tactaacgtt ggcttattcg atgtgagcca catgggggaa attcgcattg aaggtccaga
     2821 agccgcacac cttgttcaat atgtactttc taacgataca aaccaactga cattatctaa
     2881 agctcaatac acggctttat gtaatgaaga aggtggtgtc attgatgatt tagtcattta
     2941 tcaacttgga gaaacgcaat atttattagt cgttaatgct gctaacgttg ataaagatta
     3001 cgactggatt gtacaacata gtagtcgctt tgacgctaca gtgacaaatg tatccgatca
     3061 atatggtcag ctggcattac aaggtccaaa tgcaagacga atcattcaag acaatgtttc
     3121 tgaagatgtc agtgaaatgg gtatgttcga atttaagcaa aatgtcaaaa ttttcggtaa
     3181 aaatgtgatt ctctcacaat ctggatatac aggtgaagat ggctttgaaa tttattgtga
     3241 cagtgaggat gtcactacaa tatgggacgc acttttatca aaagatgtga cgccatgtgg
     3301 tttaggcgcg cgtgatacgt tacgtttaga agcaggatta ccacttcacg gacaagactt
     3361 atctgaatct atcacacctt atgagggggg gatcgctttt gcagctaaac cattaataga
     3421 ggaagatttt attggtaaat ctgtacttca atcacaaaaa gagaatggtg caccaagacg
     3481 tacagtaggc cttcgtatga ttgataaagg cattcctaga actggataca cgatttatga
     3541 tttagatggc aacgaaattg gtgaagtgac ttcaggtaca caatcaccat ctacaggtca
     3601 tgctatcggt atgggcatca ttgcacgtga tgcttttgaa atggggaaag aagtcgttgt
     3661 acaagtgaga aagcgtcaag tgaaagcgaa aattgttaaa aagaatcaaa ttgaaagata
     3721 gggagtgaat acagtgagtc atcgttatat tccattaact gaaaaagacg agcaagaaat
     3781 gttagagacg attggtgtta aatctattca agaactatac agtgatgttc ctgaagatgt
     3841 gctattaagc agagatttaa acattgcaga tgcagagcct gaaacacaat tattgaagcg
     3901 attaacacgt attgcaaata aaaatattac aaaagaaaca catacatcat ttttaggtgc
     3961 aggcgtttat gaccattatg caccagctgt tgtagatgcg atgatttcta gatctgaatt
     4021 ctacactgcc tatacaccat atcaacctga aatttcacaa ggggaattac aagcaatttt
     4081 tgaattccaa actatgattt gtgagttaac tgcgatggac gttgcgaact catctatgta
     4141 tgacggtatg acaagttttg ctgaagcgtg tttattagcg tggggtaaca cgaagaaaaa
     4201 taagattgtt gtatctaagg gtctacatta tcaagcttta caagtgttaa atacttattc
     4261 aaaaattcgc gaacaatatg aagtcgttac agtagattta gatggcactg tgacagactt
     4321 gaaaaagtta gaagcagcta ttgatgatga gacggcagct gttgcagtac agtatccaaa
     4381 cttctatggc tctattgaag atttagaagc gattcaaaca ttgattgctg ataaaaaagc
     4441 gctctttatc gtatatgcga atcctttatc tttaggtcta ttaacgcctc caggagaatt
     4501 cggcgcagat atcgttgtag gtgatacaca agtattcgga atccctacac aattcggtgg
     4561 tccgcactgt ggatattttg caacaacgaa aaaattaatg cgtaaaattc ctggccgtct
     4621 tgtaggtcaa acgacagatg atgaaggtaa tcgtggtttt gtattaacgt tacaagcacg
     4681 tgaacaacat atccgtcgtg aaactgcgac atctaatatt tgttcaaacc aagcactgaa
     4741 tgcattagcg tcttcaattg caatgtcagc gttaggtaaa caagggcttc aagaaattgc
     4801 cgttcaaaac atggaaaatg ccaactatgc caaaaaggaa tttaaaaata acggtttcac
     4861 tgttttagac ggcatatctt ataacgaatt tgtcgttcgc tttgatcgtt caattgctga
     4921 agtgaaccgt gccctcctag atgaaggtat tattggtggt ttcgacttaa gtgtagttga
     4981 tgatacgttt gaaaaccaca tgctcgttgc tgtaacggaa ttgagaacaa aagaagaaat
     5041 cgatacattt gtgcagaaag ctggtgaaat caatggtaag taaatctagt ccattaattt
     5101 ttgaacgttc tagaaaaggt cgctttgcat attctttacc gcaaagagaa attgataacg
     5161 atgttacgaa tcaacttctc gattcaaaat tcattcgtaa aaataaagct gaatttcctg
     5221 aagtatcaga acttgattta attcgtcatt acactgagct ttcgaataaa aactttggcg
     5281 ttgactcagg attctatcca ttaggttcgt gtacaatgaa atataatcct aaaatcaatg
     5341 aaaaagttgc acgtattcca ggatttactg aagcacaccc attacaagat gaggatcaaa
     5401 ttcaaggtgc gttagaaatc atttacagct tgcaagaaga attaaaagaa attacaggaa
     5461 tggatgaaat ttcactccaa cctgcagcgg gcgcacatgg tgaatggaca gcactgatga
     5521 ttttcaaggc atatcaccta caaaatggcg atgcagaaag agatgaagtc attgtacctg
     5581 actcagcgca tggtacgaat ccagcttctg cagcgtttgc tggtttcaaa tctgtcacag
     5641 ttaagtcgaa tgaaaaaggt gaagtagata tcgcccacct aaaagaagtc gtgagtgata
     5701 aaacagctgc aattatgtta acaaacccga atacattagg tatttttgaa acgaatatta
     5761 tggaaatccg cgatattgtg catgaagcag ggggcttact atactacgat ggcgctaacc
     5821 tcaatgcaat tatggataaa gtacgtccag gagacatggg atttgatgct gttcacctta
     5881 atttacacaa aacatttaca gggcctcatg gcggtggtgg tccaggttca ggtccaatcg
     5941 gcgtgaaaaa agagttgcgt gattacttac cgaaaccact cgttgtgaaa aatggcgacc
     6001 gttttgagta tgataatgac atcccatatt ccattggacg tgtgaaacca ttctacggca
     6061 acttcggtat ttatttacgt gcttatacgt atattcgtac aatgggttat caaggattga
     6121 aagaagtgtc tgaagcggct gtgttaaatg cgaactacat gaaagcgcgt ttaaaagata
     6181 cgttcgttat tccatttgat caatattgta aacatgaatt tgtattaagt ggtacgaagc
     6241 aaaagaaact gggtgtacgt actttagata tggcgaaacg tttattagac tttggcgttc
     6301 atccacctac agtttatttc ccactcattg ttgatgaagg tatgatgatc gaaccgacag
     6361 aaacagaatc taaagaaacg ctagactatt tttgtgatgc cttaatccaa attgcgaaag
     6421 aagctgagga agatccagat aaagtgttag aagcaccaca tacaacaatt atcgatcgtt
     6481 tggatgaaac tacagcagca cgtaagccaa ttttaaaatt tgagaactta aaagaagaaa
     6541 agtaactaga ttttacgacc tgtttattgt ttctaatcgt aaacagaggg atgggacata
     6601 aaaatttttg atgcccaccc ctgtttttat ttgaacgtga tatttattgt gtgattcagc
     6661 gtaaaatgct aaaatatagg aattgcgaac atttgttcta aaccttaaaa aacgtagcat
     6721 catggctatt ctttcttttt aaacgtagta ttgtctactt ttatcttttc gatctatcca
     6781 tgctttttca aaaatttata aatgtgatag aaagtcaaca tactacgatt ctgatttaat
     6841 caaacacata aaaaagagct agattatcca catttttact ggatccacta gctcttttta
     6901 ctatttttta gatttaatct tgcccgtcca ttttttgtag ccgcctttta acatgtacaa
     6961 gttcgtatat ccttttttct taagtgtacg tgcagctcga taacttgcga taccatttgc
     7021 atcaacaaga tagatgggtt gatcttttct taatccttgg tatcgttgac gaaacattgt
     7081 catagggata tttcgtgcac caataatatg accataatca tagtctgcct tttctctaag
     7141 atcgatcact tgtgcttttc taataccttc ttgaaattct tcttggttta attctgttac
     7201 tgatcgctta ttaatgataa agttcgttac catccaaatg atgaccaatg ctaacacaat
     7261 taaaacgatt aatgtcatgt tactcatctt gcatcctccc taaaataccg atattattat
     7321 tataagactg atagactaat ttatcaaaat ttttatgtgt gacatatgtt ggcaatttta
     7381 aattttttga aacataacat atgcccgatg agatttcata gggaggcttt atagcaaatg
     7441 acagaaactt ggcattttat gaatacagga agtcatcatc catactacaa tatggcattg
     7501 gatgaggctt tgttaaattt tgtatcaaga ggagaaattg atccggtcgt tcgattctac
     7561 acttggaatc caccaacgtt atcaattggt tatttccaac gactctccaa agaaattgac
     7621 atcgaaaagg tcaaagaaaa gggctacggt ttagtgagac gccaaacagg aggccgtggt
     7681 gttttacatg ataaagaatt aacttatagt gtgatcgtac cagaagctca tcctgatatg
     7741 cctcaaaccg ttactgaagc ctatcgtgtg atttcaggtg gtttactaga aggctttaaa
     7801 tcattaggct ttgatgcaca tttcgcggta ccacgttcaa aagaagagcg agagaagctc
     7861 aaacaaccga gaagttctgt ttgttttgat gcaccaagtt ggtatgaact cgttgttgaa
     7921 ggtaaaaaaa tcgctggcag tgctcaaacg agacaaaagg gcgtgatttt acagcacggt
     7981 tcgattcttc aagatgtgga tattgatgac ttgttcgaca tgtttatttt caaaaacgag
     8041 agattgaaag caaaaatgaa agaagccttt gtcgaaaaag cagtggccat taatgattta
     8101 tcaaatgaaa caatcacttt agcacaaatg gaagtggcgt ttaaagaagg tttcaaaaaa
     8161 gcactcgata ttgaatttaa accgctagaa ttaacagtag cgcaacaaga tgaagtaaaa
     8221 gcattagaag aaaaatatcg ttcagaggca tttttatatc gcaaataatc atcaggttta
     8281 atcactgtaa attaaaaggc tggaaaacgc tcaatgatat gcgcccagcc ttataatatt
     8341 gttaacttca atttttctca ataagtgatt cttaaacacg cacttatcga cgtcctttga
     8401 atttattttt ccaaacacgc tttttgtaat cccgttgatc aggcgttaaa aagaaaaaga
     8461 aatagactaa atagatgatg ccgacaataa tagctactgt aatgattgat ctaaaaatac
     8521 taaaaagtac tacatctaaa ttgaaaatta atccgattag tgcgacaaaa attattacac
     8581 cgaatatcat tttttggaaa gttgtcatgt taattactcc tctttatatt atcctgcatt
     8641 tgtagttttc acattgatgt ttgataagct ctgacgtcct ttttgaattt catttttatc
     8701 tttcgcttta taaccttttc gaatcattgt taaagcactg ttgatttctt tttgtagttt
     8761 tttaatttct ttgtcctgtg ctttgattga tttatccttt ttaacaatct tttcatcttc
     8821 cgtggcatct tggtaacttt ccatcgcact ttcatgatcc tcaataattt gatctaattg
     8881 atccaacact ttatcctctt ttttgtttgc taacactttc gaatcaattt gttggtaggc
     8941 attaatcgca tccgttacag aggcataata ttgtgatgaa atttcaagat aatctgcttt
     9001 tttctgatta gacttcgctt gttttgtatt ctctgagtct tttttcaaag cgtccacttg
     9061 tttttgtttt ttcgcatttt catttttaag ttgctgattt tctaatttaa tttcatgatt
     9121 tttgtcactt aaatccgtac ttctcttttc tagaggtaac aggttttgac ttccacaggc
     9181 tgacaataaa aatgcaacac tgatactcgc acaaattctc tttttcatat taaactccta
     9241 aacactcaat tgtttttcac tacatatgac tacattttaa ggtatcatgt aattaagtac
     9301 aaatataagg aggaattttt gtatgaaaaa tagacttcaa aagataagaa ctttattaca
     9361 agacaaacat ctcgatggtt taactgtgtt atctgacttt aatcgccgct atttatcagg
     9421 gtttacaggt acaagtggcg cactcatcat tacacaggac aaagcactac tcattactga
     9481 tttccgatat actgatcaag cacaacagca agccactgag tttgaggtca ttttacaaaa
     9541 aggtgatttg ttctccgcat taacagaaca atttaaaaca ttaaatttac aaaatattgg
     9601 ttttgaaggt catctcgtcg cttatgattc atttttaaaa ttaaaccaag gccgtcacga
     9661 tctcatttct atcggtcaag ctattgaaac gattcgtcaa acgaaagatg aaggtgaaat
     9721 taaagcgatt caaaaagcag cacaaattgt ggatgaagca tataaatata ttctcactgt
     9781 cgttaaaccg ggtatgactg aaaaagaagt taaggcgcat ttggaaagta aaatgttgca
     9841 tttaggcgca gacgacacgt catttgatac tatcgtcgct tcaggtattc gaggtgcgat
     9901 gccacacggt gtagcttccg ataaagtcat tcagtcagga gaaatggtca cgttagactt
     9961 tggtgcttac tacaacggtt attgttcaga tatcacacgt actttcgctg tcggccaacc
    10021 ttctgaagaa atggttaaaa tttacaatat cgtgttgaaa agtcaagaag ccgccattgc
    10081 agcgattcgt ccaggaatga caggtaaaga aatggatagt attgcgcgag atattattac
    10141 agaagcgggt tacggaaaac actttggtca ttcgttaggt cacggtatcg gtttagacat
    10201 tcatgaactt cctggcctgt ctcaaaaatc agatgtcgtc ttagaaaaaa atcattgtgt
    10261 gacgattgaa cctggtattt acgtagaagg attaggtggt gttcgtatag aagatgatat
    10321 tttaattaca gaaaatggcg gcgaacgctt tactaattgc acaaaagacc ttattatttt
    10381 aaaagaagag tgattctgag gaggaaactg aatgatttct gtaaatgatt ttaaaacagg
    10441 cttaacgatt tctgttgata acggaatctg gaaagtaata gaattccaac atgttaaacc
    10501 tggtaaagga tctgcgtttg taagatcaaa attacgtaat ttaagaacag gtgcaatcca
    10561 agaaaaaact ttccgtgcag gcgaaaaagt tgagcctgcg atgattgaaa accgccgtat
    10621 gcaatatttg tatgctgatg gcgacaatca cgtattcatg gacaacgaaa ctttcgaaca
    10681 aacagaacta agcacagatt acttagaata cgaattgaag tttttaaaag caaacatgga
    10741 tgtacatatc caaacgtacc aaggcgaaac aatcggtgtg gaattaccaa aaactgttga
    10801 acttgaagta actgaaactg aacctgggat taaaggggat acagcgacag gggcaacaaa
    10861 atcagcaacg gttgaaacag gttacacatt gaatgtgccg ttattcgtta atgaaggcga
    10921 tgtgttagtc attaacacaa cagatggtag ctacgtatca cgtggttaat ttaattcata
    10981 tcaggtgaac gagattttcc tgataatgtg actaatagaa tattattatt ggactaatga
    11041 ggctgatgat tgtcttgtta gtccatattt tatttttaag ctatacatag ccataatcag
    11101 cgttgtttat tctatctatt aacatagcat cgttgaatat ttcaaagacg atacgatcaa
    11161 caaaagcgaa tcgattgaat catttagtaa gaatgaaaaa gtcactacta cgctttagat
    11221 attatgtatt ttcttgaatt gccttataca ctcaagtaaa atagtagggt agaaataatc
    11281 aatcataagg gagtaaccaa aatgaatttt aaagagatta aagaattaat taatattcta
    11341 gacaattcta acctcactga aatcagtatt gaagataaag gtacaacgat caacttaaaa
    11401 aaagaaaaag aaattgtaac tcaacaaatc tcagcacctc agcaaatggt tgcaccaact
    11461 gtaacagctg aacctgtcca agtaaacgct gcatcagtag atacaccaac aacagaggct
    11521 gatacatcac tcaaaacgat tacagcacct atggtcggta cattctataa atcaccgtct
    11581 cctgaagaga gcgcttatgt tcaaatcggt gatcaagtga cacctgatac aactgtttgt
    11641 atattagaag ccatgaagtt atttaatgaa attcaagctg aagtggctgg tgaaatcgtt
    11701 gaaattttag ttgaagatgg acaaatggtt gagtatggcc aagctttatt caaggtgaaa
    11761 taatatgaga aaaatattaa ttgcaaaccg tggcgagatt gcagtgcgta ttattcgcgc
    11821 atgtcacgaa ttgggtatcc aaactgtagc gatttattct gaaggcgaca aagatgcatt
    11881 acatactcaa ttagccgacg aagcctactg tgtgggaccc aagcaatcaa aggattcgta
    11941 cttgaacata ccgaacattt tatctatcgc cacttctacg ggatgtgacg gtattcaccc
    12001 tggctatggc ttcttggctg aaaatggtga ttttgcggaa ttgtgtgaag ctgtccaact
    12061 gaagtttatt ggaccgagct atgaatcgat tcagaaaatg gggattaaag atattgcaaa
    12121 agaagaaatg aaacgtgcaa atgtccctgt tgttcctggt agtgagggac ttgtgaacac
    12181 gattgaagat gccatccaaa ctgctaactc aattggttac cctgttatta taaaagcaac
    12241 tgctggtggt ggtggtaaag ggattcgtat cgcacgaaat gaagaagaat taatcaatgg
    12301 ttataaaatg acacaacaag aagcagaaac agctttcggt aatggtggct tatatttaga
    12361 gaaatttatt gaaaacttcc gtcatattga aattcaaatt cttggtgatg agcatggaaa
    12421 cgtgattcac cttggcgaac gtgattgtac gattcaacgc cgcatgcaaa agcttgttga
    12481 agaatcaccc tctccaattc ttactgaaga gaaaagaaaa gagatgggtg atgcagctgt
    12541 aagagcagct aaagcggtca attattttaa cgcaggaact attgaattta tatatgattt
    12601 agatgaagat caattttact ttatggaaat gaatacgcga attcaagtcg agcatccagt
    12661 gactgaaatg gtgacaggtg tggatctcgt aaaacaacaa atcaaagtgg ctatgggaga
    12721 aaaattacct tatacacagg atgatattca aattcaaggt catgccattg aatttcgtat
    12781 caacgctgaa aatccttata aaaactttat gccttcacct ggtaaagtcg aacagtattt
    12841 aacaccaggc ggatttggtg tacggattga ttcagcttgt tacacgaact atgtcattcc
    12901 accatactat gattcaatgg ttgcgaaatt gattgtacat caaccgacga gagaggaagc
    12961 cattatgtct ggtttacgtg cgctcagtga atttgtcgta ctcggaatcg atacaaccat
    13021 tcctttccat attcgtttac taaatcatcc agtcttcaat caaggtttct ttagcaccaa
    13081 atttttagag atttacgata ttatgaatga agatcattaa attgaatggg ggcaacttat
    13141 atggcaaagc caattgaaca tttcaaccca aatcttggaa gtgttgaaat cgaacctgaa
    13201 gtcatttctg ttattgcaag tattgcagtg tcagaagtga agggtgttga aggggtattt
    13261 ccggatttaa aaaattcaac tttggaacgc tttggtcgca aaaacttaag taagggcgtt
    13321 aaaatcacaa caaaagacaa tgaaatcact attgatgtct attgttcttt aaattatggc
    13381 gttaaagttt ccgaaacagc gttaaaagtt caagaatcca ttcatagtgc attgcgaacg
    13441 atgactgcac tcacacctca acaaatcaat gtgcacatta cacatataga aatggccaaa
    13501 aataatcgtg attaactgat gaacggagaa ttaaaatgag tagaaaacaa gcaagaagtc
    13561 aagcctttca aacattattc caactagaga tgaaaaatac agagttgacg attgatgaag
    13621 cgattagttt tataaaagaa gactatccag atttagattt cgacttcatt aaatggcttg
    13681 tttctggtgt gaaagatcat caacatgttt tagacgaaac aattagtccg catttgaacg
    13741 gatggacgat tgcgcgtttg ttgaaaactg atcgtatcat tttgcgtatg gcgacatttg
    13801 aaatgaacca cagtgataca ccagaaaaag ttattattaa tgaagcagta gaactggcaa
    13861 aacaatttag cgatgatgat cattataaat ttatcaatgg tgtattaagt cacattaaaa
    13921 gaaattgagt gatggcatgg aaaaatattt aacaatctct gcattaacta aatatattaa
    13981 atataaattt gatcaagacc cacatcttca aagtgtctac atcaaaggtg aattgtcgaa
    14041 ttttaagcgt cacagtagtg gtcatttata ttttgccgtt aaagatgaaa acagtgttat
    14101 cgctgcaatg atgtttaaaa caaaggcaaa tcaacttgat ttcgacccaa aagaaggaga
    14161 tcaagttctc attgaagcac gagtatcagt ttatgaacga cgtggtaact atcaaattta
    14221 cgttaatcat atgcaactgg acggggtagg gaatctttac caaaaatttg agcaattaaa
    14281 aaataagctt atgaaagaag ggttttttga ccctgctcat aaaaaaccta tacctaagta
    14341 tcctcaaaaa attgcgatac ttacagccag taccggcgca gctattcgag atattcaaaa
    14401 cactttgaac aatcgttacc cacttgctca acaaatcaaa atcagtacac tcgtacaagg
    14461 ggcacaagca aaagcggaca tcatcgaaaa attacaatct gcggatcaac tcggtgcaga
    14521 tgtgattata cttggacggg gtggcggctc aattgaagat ttgtggaact tcaatgagga
    14581 agatgttgtt aaagctattt tttcatgtca aacacctgtt atatctgctg ttggacatga
    14641 aacagataca acacttagtg actttgttgc tgatttacgt gccgcgacac cgacacaagc
    14701 tgtgatgtta gcgacgccgg acaaacaaga gctcaaacaa gtgttgtatc aaacgcgtgc
    14761 gtatttaaat cgttatatga agcaacattt aaaacacaca tcacaacaac tacagcagct
    14821 gcaatcgtat tacaaactta agcaacctgg tttgttatat gaacagcaaa tacaaaaacg
    14881 tgacgagctc gatcgcgccc ttcatcaatc tatgcaattg cgactacaac atgaacaaca
    14941 acggttagcg atgttgcaac aacgcattcg cattaaatat ttttatgata acgtacaacg
    15001 tcaaaagcaa gcatctatag atttatcatc tcagttacat aaacaaattc aacgtatttt
    15061 aacttctaaa aagcaaatct ttcaacatca actgttatcg cttgataatt tgagtcctac
    15121 aaagacgatg ttacgaggct actctatagt taaaaaagat gatgaagtta ttacgagtag
    15181 tcatgacata catgaaggtg aacgcattga agtcactatg aaagatggcg ctttagatgc
    15241 aagaattgaa aaggtgaggt ggcaaaatga cgaccgaaaa taaatctttt gaagaaatga
    15301 tgaaagaatt agagaatatt gtaaatcagc tagatcatga tacgatatcg ctagaaaaat
    15361 ctttagaatt gtatcaacaa ggcattgcgc tttctaaatc atgtgaaaaa acattgagtg
    15421 atgctgagaa gaaagtagca gaattaatgg ataaagaggc agatgaaagt aatgaatcaa
    15481 agtctgaatg agttattaga acaatttaat ggccacttga atcatgcaat tgaagattct
    15541 caactaggta cttctcttga acagagtatg cgttattctc tagaagctgg tgggaaaaga
    15601 atacgcccct tactcatgct agctacaatt aaaatgttgg atcatcaaaa gcttgagagt
    15661 ggtatgcatg ttgctttagc gctcgaaatg attcatacat attcattgat tcatgatgat
    15721 ttacccgcaa tggatgatga tgatttgcgg cgtggtaaac cgacgaatca tacggtctat
    15781 ggtgagtggc tagcgatatt ggctggagac gccttgttga caaaagcgtt cgaaaagatt
    15841 gcgttgacac ctcttatcga cgctcaaatt aaagttgcac ttattgaaaa aataagtcaa
    15901 gcaagtggac atcaaggtat ggtaggcggt caaacattag acatgcaaag tgaaaatcaa
    15961 caaatttcac tcgaaaaact cgaaagcatt cacattcata agacgggtgc actgattcag
    16021 tttgcgattg aagctgcaac aatcattaca tcaattcgtc aaacaactgc acaacaattg
    16081 attcagttct ctcaacattt aggtgtcatt ttccaaatta aagatgacct cttagatgtg
    16141 tatggtaatg aagcgaaatt aggcaaacca gttggaagtg atgtcactaa tcataaaagt
    16201 acgtatgtca cacttttagg tgagaagggt gctgaacaag aacttcaagc acatattcaa
    16261 aaagccgaag ccattttaac aacattatca acggaatttg atacaacaga tttaaactat
    16321 ttgttaacac ttttttacca acgtcaaaat taggttctgt ctatctatga tgtgattgaa
    16381 gtgttataat cagtacgata gaaaaaatta agggtgattt caatggacgt aagaaatata
    16441 cagaatcctt cattcttaaa aagtctttct gttaaagagc ttgaagcatt gagccacgat
    16501 gtgagacagt tcttaattca aacgtgtgct gtcacggggg gccatattgg tgcaaattta
    16561 ggtgttgttg aactcacaat cgcactgcat aagcatttta atagtccaga agataaaatt
    16621 atctgggatg tcggtcatca aagttatatt cataaaattt tgacaggccg cggtcatcag
    16681 tttgaaacat taagacaata tagaggatta tgtggatttc caaaattaaa agagtctgat
    16741 catgatgtgt gggaagctgg gcatagttct acctcattat cagcagcgat gggcatggca
    16801 aaagcgagag atattttagg caaaaagaat catatcgttc cagttattgg tgatggtgca
    16861 ctgactggtg gtatggcact tgaagcttta aacaacatcg gccatgaccg tacaaacatg
    16921 acaattattt taaacgataa cgaaatgagt atcgcaccta atgttggcgc gatgcataac
    16981 atgctcggtc gtattcgaat gaaccaaggg tataatcgac tcaaatttga tgctgaatcg
    17041 attttaagtc ggttgcctgg gggcagtcga ttacgtgaat ctgctgatcg tatcaaagac
    17101 agcttaaaat atttagttgt agatggcgcg tttttcgaag agctcggaat tcgttatatt
    17161 ggtccagttg atggccatag ttttgaagaa ctggagaatg ccttggctgc agcagattct
    17221 attaacaaac cagtgttgat tcatgttgta acgaaaaaag ggaaaggtta ccatccagct
    17281 gaaaatgata aaattggcac ttggcacggc ttaggaccat acaaattaga aactggcgaa
    17341 cagattaaag gccaaacaca aggaccttca tggagtcagt taatgagtga tgaaattctg
    17401 tcatacgcta aaaaggatcg tcgtgtcgtt gctattacac ctgcaatgcc tgtaggttct
    17461 aaacttacaa aattccagtc cgagttgccg gaacaatttt ttgacgtcgg tattgctgaa
    17521 caacatgctg tcacgatggc ggctggttta gcgatagaag gtatgaaacc gtatgttgcg
    17581 atctattcaa catttttaca acgtgcgtat gaccaagtgt tacatgatgt cgatcgtcaa
    17641 aacttaaacg tcatttttgg agtggatcgc tctggccttg tcggtgcaga cggtgaaacg
    17701 catcaaggtg tgtttgatgt cggtttcttg acacaatttc caaatatgat tgtaacgatg
    17761 cctaaagatg aaaatgaagc gaaaaatctc gtttatacag cgatgcatca tgcacaaggg
    17821 ccaattgcaa ttcgttatcc acgtggcaat ggtttaggcg ttgaaatcac tgataaacgt
    17881 gagcacttgc ctattggaac atgggaagac ttaactgaag gtcaagacgt ggctcttatc
    17941 agctatggac ccacactcgc gactttagtt gaagttgcta aaactttagc agagcaaggg
    18001 attcgagcac gcgtcattaa tgcacgttat atcaaaccga tggacacgac tgtcttaggt
    18061 gacttaggtg ccaaaaacac gcctgtggtt acagttgagg aagcgatgct aaatggtggc
    18121 ttaggcagtc aaatcgcaaa ttacttcacc gatcatggat acaccaatcg tatcaaaaga
    18181 ctcggtattg atgatacgta cattgagcac ggagatgtag agcaaatttt agaagattta
    18241 gggttaacgc atgacccgct cgttcataca attcaacaat ttttagacta acatccaaac
    18301 acgagtaatg tattacagtt gctcgtgttt tttaatggat ggaaatgacc acatttgttt
    18361 catttcaatt ctatctttat tcaattttcc tactcaaaag gagaatcata tacatttttc
    18421 gtatatattg aatcgttacg cacgctgttt ttgaatttta aaagtcaatc gttatatcaa
    18481 ttgtttctta cgatgacgta catcacttaa gtaggtaaat cataaccgag tgtggtaaaa
    18541 tcattgtata aatattcgtt acgaggtgtc tattatgcct aaaaaatctg taagacatat
    18601 aaaaattaga gaaattattt caaacgaaca aatcgagaca caagacgagt tggtgaaacg
    18661 tttaaatgat tacgatatga acgtcacgca agcaacagtg tcacgagata ttaaagagct
    18721 tcaattaatt aaagtccctg caccaagtgg tcaatatatt tatagtttgc ctaatgatcg
    18781 tcgttatcat ccacttgaaa aactaggacg ttatttgatg gattcatttg taaaaatcga
    18841 cagtgctaat aatttactcg tgctaaaaac gttgccaggt aatgcacaat caattggtgc
    18901 gatactggat caaattgatt gggaagaagt gctaggtacg atttgtggtg atgatacgtg
    18961 cttaattatt tgtcgcgata acccttcagc tgatgaaatt aaagaaagaa ttttcaatat
    19021 gttataagga tggatgtcag atgttacaaa gcctctccat taaacaattt gctattatcg
    19081 atacattaga tattcagttt tcagatggcc tcactgtgct tagtggtgaa actggtgcgg
    19141 gtaaatcaat cattattgat gccattggac aactgattgg tatgcgtgct tcctctgaat
    19201 ttgtacgaca tggtgaaaag aaagcaatta ttgaaggcat ttttgatatt gatgatgcga
    19261 aagatgcgat acgtcaactt gaaacgttag gaattgatat taatgaagac tttttaattg
    19321 ttaaacgaga aatttttagt tctggtaaaa gtatctgtag aattaacaac caaactgtga
    19381 cgttacaaga tttaagacaa gtcatgcaat ctttacttga catccatggt caacatgaaa
    19441 cacaatcttt attaaaacaa aagtatcacg ttgaactact tgatcgttat gctgacggtg
    19501 aatatattga agaacttcag caatatgccc aatcttatga acaacatcaa gaaaagataa
    19561 aagagcttga agcactagag tctgcagatc aagctttatt acaacgtcta gatttaatga
    19621 agttccaata tgatgaatta aaagaagcgc aattaaaaga aggcgaaatc gaacaattag
    19681 aaatcgatat taaacgtatt cagaactccg aaaacttaag tttagcattg aacgctgctt
    19741 atgtgacttt aacggatgaa catgcgatta cagatcgcct ttatacttta agctcagaat
    19801 tacaaaatgt gaatcaaatt ttacctgaaa cgtttgaaaa gctaaaagaa gaagttgatc
    19861 aattttatta cactttagaa gatgctaaac atcaaatcta tgaagaaatc aaccaaactg
    19921 aatttgatga acaatattta aatgaactcg aatcacgaat gaacttgttg aacaatttaa
    19981 aacgcaaata cggcaaagat atttcagatt tgatgattta tcaagaaaaa atcgctgatg
    20041 aaattaataa aatcgaaaat tatgaagaaa gtacctcgaa actacgtgaa gaaatccatc
    20101 aattatcgca acaagttcag gaagatgggg aaaagttaac aaaagcgcgt agaatagtag
    20161 caagacagtt gcgcgatcgt attgtcaatg aaatccaata cttacaaatg aaggatgcga
    20221 atttagaaat ttcgtttaaa ccttatgaaa caccgcaaaa agatggttta gaacgcattg
    20281 aatttttaat tagcccaaat aaaggtgagc cattaaaaag tttgaacaaa attgcaagtg
    20341 gcggtgaact gtcacgaatt atgctcgcac tgaaaagtat ttttgtacgc gcacacgggc
    20401 aaactgcgat attatttgat gaagtggatt ccggtgtttc tggacaagcg gcacaaaaga
    20461 tggctgaaaa aatgaaagac attgcttcag ttattcaagt catctgtatt tctcacctac
    20521 cacaagttgc gtcaatgagt gatcatcatt tgtacatttc aaagcatgaa aaagatgacc
    20581 gcaccactac aactgtacgc gaacttacag gtgatgcacg gatagatgaa attgcacgca
    20641 tgatttcagg tgcaactgtt accgaattga caagagaaaa tgcgaaagaa atgattgaac
    20701 aaaaccaaaa gcataaagga tgatgaaagt tgaattttac agacttgctt aaagaacctc
    20761 aagctctaac agggacaatt gcgattgtta atgcaacgga tgaaccactt attagagtca
    20821 ttattgaagt tttaaagcaa accgaagctg acttcaaact ttataataat caagatgtag
    20881 ctgaaattat tcgttcattt gagttgtcgg ccgacttttt aaagcgtatc catattcaaa
    20941 cttttgatac agaagaggct gcaattgaag gttgcttaaa tgatttgcat catggcaaag
    21001 cacaaatttt gatgaaaggg caaatttcaa ctgctaaaat cttatctgcg gtattaaaac
    21061 gtaacgcaca aggtacaaaa ccttttttaa accatgtggc gttatgtgaa atcccgtcgt
    21121 atcacaaact gcttatgatt tcagacgttg cgctcaatat tgcgccaaca gaagaagaga
    21181 tgaaagccat tattcaaaat ttggttgatt tttcaaaaag gctacaatat caacaacttc
    21241 acattgcatt attgtcatcc gttgaaaagg tcagccctaa aataccatct accgttcaag
    21301 ctgagcgttt aagtgaatat tatcaatcac atcctattga accgcatgtg catgttgaag
    21361 gtccatttgc gttagataat gcgattgata aaaagagtgc gattcaaaaa ggtatccatt
    21421 caaaagttgc agggaatgca gatgttctta tagttccagg attagatgca ggcaatgtat
    21481 tatataaatc actcacatat tttggtcgtg caaaagttgc gagtcttatt ctcggcgcac
    21541 attttccaat cgttcttaca tcaagagcgg acagtattga aaataaaatc aactctattt
    21601 tagtcgcatt aaaagtcggt taaccttgta aacaaaatat gggactggga tattgagttt
    21661 tcccagtctc tatctatatt atggacgcaa atccattaat gatgataaaa aagtcaaaaa
    21721 atgtggatga attggatatt attgtttgtc ctcattctat caacttgcct taagttgttg
    21781 catttgatgt aagtttgacc aaaaggctaa gacgcttaag agattgcgtg tatactgcta
    21841 gcgttcactt ctttacttta atagtggtta ctgtttatca cagtagctgt ctgccttctc
    21901 aaggcgcatg tttttcagat gtcgagtcag ccatccgggt cagtgcgacg aaatctttat
    21961 gacacatgag atttctgtac tgcttccata atccactaac acctcaacaa atgtaacagt
    22021 ttaatcaagc gttagtgagt tgaagggcaa acccatagga acaccaagac atgaaggcaa
    22081 tcaaaaacac aattcgtaaa gagagcaagt taaactataa tattgcgact atagcatctg
    22141 aagttttgtt ctccatctcc atacattttt gatttgtttt tgaaagaagg gattgtatga
    22201 caacaacact cgtattaaat ttagggagta cctctagtaa atatgcaata tatgaaaatg
    22261 atgaatgtaa agtaaatgaa aatatcagcc acactgaagc tattttaaag caacccttaa
    22321 ttgatcaaga gtcattgaga caacaattga ttgaagatga aatcgaatca caggggtatc
    22381 agttgaatca aattgatgcc attgcctgtc gtggcggtct tctcaaacca cttgaaggcg
    22441 gtacatattc agtaaacgaa gcaatgtatg acgacttaaa aagctttaag tatggcgccc
    22501 atgcttctaa tttaagcgcc atgattggtt atcaacttgg ccaaaaatac aatatcccag
    22561 tttttacgac tgatccggtt gtcgtagatg aattgatcga cgaagtacgt catactggag
    22621 tgccgtccat tcaacgtcga agtatctttc atgcattaaa tcaaaaagcg atggctcgtc
    22681 gttatgccgc actagtcaat cgtgcttatg aaaatatgaa tgtgattgtg atacatatgg
    22741 gagggggcat cagcattggt gcgcatgaaa aagggcgtgt cattgacgtg aatgaagcat
    22801 tatatgggga aggtccaatg gcaatggatc gttctggcag cataccaaat gatttacttg
    22861 tccaatacat ggataagcat cagttatccg ctgatgaaat caaggtgcag ttaagtcgtg
    22921 agtctggact taaagcatat tttcagacat ctgatttaag agaaattatg gccaagtatg
    22981 agcaagatga aaatgtgaag ttaattatcg acacaatggt gattcaaatt gccaaagtga
    23041 ttggagaacg tgctgtcgtt ttaaaaggac acgtcgatca aattattttt acaggcggta
    23101 tgagccatag tgttcaatta atggatcagc ttgcgaagta tatagagtgg attgctccaa
    23161 tttcagtttt cccaggagag catgaactta tcacgcttgc agaacgtgca caattagcat
    23221 tgaatcagca aattaaaatt gagatatatc aataggagaa aacatatgac aaaagaaaaa
    23281 tacgatatcg ttatccttgg cgggggtatt gcgggatatt ctgctgcaat ccgcgcgagt
    23341 caacttggaa aatctgttgc tatagttgaa aaatcaaaaa tgggtggaac atgtttgcat
    23401 caaggctgta ttccaacaaa atcttttctc aaatcagcag aagtgtttca atacgtacaa
    23461 catgccgatg actttggtgt gactgctgaa caaccgacgt ttaatttctc aaaagtgatg
    23521 gaacgtaaaa atcgcatcgt cgacacaatg tatcaagggc tacaagggtt aatgaaacgt
    23581 cataaaattg atgtatttca tggcgttggt cgcctaatgg gtgcttcaat ttttacacct
    23641 caaagtggca cagtttctgt agagtatgaa gacggaacat ctgaactatt accgaatgac
    23701 tatgtattaa ttgcaacagg atccaaacct atggcactac cgtttttacc gtttgatcaa
    23761 caacaaatat atagtagtaa tgatatgatg acgcttgaaa cattaccaca atccatcacg
    23821 attattggcg gcggtgtcat cggattagaa tttgcatctt tctttagtag tgtaggtgtc
    23881 acggtacata ttatcgaagc tggtccacgt attttaccaa cagaaaatgc acaaatcagt
    23941 caattaattc aaaaacaatt ggaagagcaa ggtgtcaatt tccatatcaa tacggtgctc
    24001 aaaggagacg acatccaaca aagcgacgag gaagtgacct tcaatcttga aaacccattc
    24061 tccactgaaa aagtactcgt tgctattggt cgacaagtga atacagcgga tttaggttta
    24121 gacaatacga aagttgtatt gaatgataag caaatgatcg aaacgaacga atatatgcaa
    24181 acggctgata cacatattta tgctgctgga gatgtaatcg gccatttaca acttgcacat
    24241 gtcggagcta gagaaggtgt gattgccgtt gaacatatgt ttaatgaaaa tccactaccc
    24301 gttgattatg atttgatgcc aagatgtgtt tatacatcac ccgaaattgc gtcaatcggt
    24361 gttaatcaag aaacggcaaa acaacgcggt cttaaatttg aagtcatgaa agcaccgttt
    24421 aaagcgaatg gtaaagcaac gattactact tcatcaattt ctgaaggctt tgctgaacta
    24481 ttgtttgatc aagcatctgg tagtttgatc ggtgcatctt taattggtcc tcatgttaca
    24541 gagctcatca acgaattaag tgttttacaa tttatgaatg gttctgcact tgaattagga
    24601 ctttcaacac acgcacatcc gtccatttca gaattactca tggaattagg attaaaatct
    24661 aatcatcaat ctattcacat atagataaga aggaggaaaa tagatatgaa agattatcaa
    24721 agtgttggcc ttgaaattga agatttaaaa aacatgtacc gtgctatgga tttaggccgt
    24781 aagttagatg aaagaatgtg gctcttaaat cgtgctggga aaattccatt cgtcatcagt
    24841 tgtcaaggtc aagaagccac acaaatcgga acggcttatg ctttacaaaa aggagacatt
    24901 gcatcgcctt attatcgtga tttagcatta gttacttatt taggtatgac acctttagaa
    24961 acgatgttat ccgcttttgg taaacgtgat gacatcagtt ctggaggtaa acaaatgcca
    25021 tctcacttca gtaaaaaaga agtcggcatt atgtcacaag ggtcttcagt ggctacacaa
    25081 atcctccatg cagtcggtgc agcattaaca tttaagatgg atggcaaatc tcaaatcgca
    25141 ttaacgacac taggtgaggg gagttcaaac caaggtgatt ttcatgaagg gttgaatttt
    25201 gcaggcgtcc ataacttacc atttatttgc ttaattgaaa ataataaata tgcgatttct
    25261 gtatctaaag aattccaata tggtgcaaaa tatttatcag atcgtgcgaa aggatatggc
    25321 atgttcggtg agacgattga cggtaatgac ccaattgctg tctatggtgc tattaaaaaa
    25381 gctcgcgaac gtgcagtaaa tggtgaaggt gcctcattaa tcgaagccat gtgtacaaga
    25441 ttaacagcac actcttcaga tgatgatgac cgttaccgca cagttgaaga aaaaaatgcg
    25501 gataaagaaa atgattgtaa ccttaaattc aaacaatatt taatcgatca gtcattagtt
    25561 gatgaaacgt ggtttgagtc gattgaaaaa gaaaatcaac agtgggttca tcaagcgact
    25621 aaagaagctg aggccgcacc atacccagat ccatctgaaa catacttaca tgtctacgaa
    25681 gaaggaggac gtcaacatgg ctaaaatttc atatcttgaa gctattagac aagcacttga
    25741 tgtcgcgcta gaaaaagatg cgcaaacgat gattcttggt gaagatgtag gtaaaaaagg
    25801 tggcgttttt ggggtgacag ctggattaca agaaaaatat ggcgtttatc gtgtattaga
    25861 tacaccactt gctgaatcca acattgtcgg ttctgctatt ggtgcagcga tgatggggaa
    25921 acgtcctatt gctgaaatac aatttgcgga atatatttta ccggcgacta accaaattat
    25981 gagtgaagct gctaaaatgc gctatcgttc taacaatgat tggcaggcac cattaacgat
    26041 tcgcgcacca ttcggcggtg gtattcatgg cgcactttat cattcacaaa gtatcgaaag
    26101 tgtatttacg tctactccag gcttaactgt tgtcattcca tccacacctt atgatgcaaa
    26161 aggcttactt ttagcgtcaa ttgcatcaaa tgaccctgtg cttttctttg agcataaaaa
    26221 ggcatatcgc ttactaaaag aagaagttcc agaaggatat tacactgtgc cgcttggtaa
    26281 agctgatgtc aaacgacaag gtagcgatat cacagtattt tcatacggtc tagcagtgaa
    26341 ctattgtctt caagcagcag atttattaaa aggtgaagct atcgacgtcg aagtggttga
    26401 tttgcgtact gtctatccgc tcgatcaaca aacgattatt gaatgcgcga aaaagacagg
    26461 taaatgtttg ttagtcacag aagacaataa agaaggtagc gtcatgtcag aagttgccgc
    26521 gattattgct gaaaattgtt tatttgattt agatgcaccc gtaatgcgat tggcgggtcc
    26581 agatgtgcca gcgatgccat tttcaccacc gttagaagat gaatttatga ttaacccgga
    26641 taaaattaaa aataaaatgc gtgaattagc acaattttaa ggaggtgcac tcatggaaat
    26701 caaaatgcct aaactcgggg aaagtgtgca tgaaggtaca attgaacagt ggctcgttca
    26761 agaaggggac cgtgttgaag aatatgaccc attgtgtgaa gtgattacgg ataaagtgac
    26821 agctgaagtg ccctcatcat acgcaggaac gattaaaaaa attattgctg ctgctggtga
    26881 cacagttgaa gtcggttctg tcatatgcga aatggaagtg gaaggtgata ctgacgaagc
    26941 aactgaaaat gtagctccag aagctgatgc gacaactaca gaacaaacaa atgtgccgcc
    27001 agcaccacct tcaacagaaa atcaatctaa aaataatggc cgtttttcac ctgttgtatt
    27061 tagattggct tccgaaaaca atattgattt atcaacagta acagggacag gatttgaagg
    27121 ccgtgtcact aaaaaagata ttgaacgtgc gattgaacaa ggtactacta caccaaaaga
    27181 aaatgctgta cctcaagaga cagtagagcg cattgcacca acgtcacctg tagccaagca
    27241 aaatcaccat acattaacaa caagcgatcg tgatagcgtg attcctgtca atggcgtgcg
    27301 ccgtcaaatt gcgaacaaaa tggttcaaag tgttcatgaa attccacatg cttggatggc
    27361 tgtagaagtg gatgctacag aattaacaaa aactcgcgcg cattacaaaa atcaatttaa
    27421 agcgcaagaa ggatataatt taacattctt tgcatttttc attaaagctg tagcagaagc
    27481 gcttaaaaaa tatccattac ttaacagcac atggcaagaa gatgagattg ttgtacattc
    27541 tgacatcaat atttcaatcg ctgttgcgca tgaaaataaa ttgtttgttc cagtcattcg
    27601 tcatgccgat gaaaaatcta ttaaaggcat tgctcgagaa attcacgaac tcgcacaaaa
    27661 agcacgacaa aatcaacttt cgtatgaaga tatgcaaggc ggtactttca ctgtaaataa
    27721 tacgggaact tttggttcgg tacattctat gggcatcatt aatcatccgc aagcagccat
    27781 tttacaagtt gaatctattg ttaaaagacc agttgtcatt gatgacatga ttgcgattcg
    27841 ttctatggtg aacctatgtt tatcactcga tcaccgtatt ttagatggtt tacaagccgg
    27901 acaattttta aatgaagtga aacaacgtat tgaagcgttt accgttgaac atacacacgt
    27961 ttattaattt gtgtgaaaaa gttggataat aatctatgaa taagggagtg gctgggatgt
    28021 tttcctagcc ttttctaatg gtttggcgtg cttcgttaaa attaaactcg tcacgcaaac
    28081 tacggtccaa atcctagttt ttctggccag atgttgccga atgattgcag ttgtgcatga
    28141 cctttagtaa aatgtaatta attgaaatac ttatgatgga ggaatgttca catggatatg
    28201 aacttcgatt tatatatgaa taatatcgtc aaacaagccc gttctgaaat ggaccatgcg
    28261 ggttacgaac aattagcaac tgaagaagat gttgatcgag tatttaaaca agacggcaca
    28321 actttagtca tgatcaactc agtatgtggt tgtgcagggg gtattgcacg tccagctgcg
    28381 acacacgctt tacactatga tgtattaccc gatcgtcttg tgacagtatt tgcaggtcaa
    28441 gataaggaag caacgcaacg tgcacgtgat tattttgaag gttatgcacc atcaagccct
    28501 tcatttgcgc tcatgaaaga cggcaaaatt actgaaatga tcgaacgtca ccaaatcgaa
    28561 ggccacgata caatggacgt aattacgcaa cttcaagctt tatttgaccg ttattgtaac
    28621 gctaagtaag gtgctcatca tgttgcgttt aaatccatat cgcatcggat tgagaacgat
    28681 aaagaccgct gtcggcatgg cactaggtgt aatcatcgca caactactag ggttggataa
    28741 ttacgcttct agtgccattt tggtggtatt atgtattaaa gatacgaaaa tacactctgt
    28801 tcacgcgatt atttctcgtt ttatatcctg tttaattgca atcggctttg gttgggctat
    28861 ttttccgcta ttagggcaac acgcctgggt acttggttta attgttctct ttttcattcc
    28921 tgttactgtg atgattaata tgcaagaagg tgtcgtaaca agcattgtca tcttactcca
    28981 ttttttcaat gctgatgtca tcgatttttc attagtcgtc aatgaagtat tgctgattat
    29041 cgttgggtta gctattgcgt ttacgatgaa tacaatcatg ccaaatttgg accaccaatt
    29101 atctaaatat aaaaaggaaa ttgagtttca attcaaaagc attttccata cgtttagttc
    29161 agcctgtgcg atgcataata accgacctga tgtgacgttt aattcattgg cacatacaat
    29221 tcaagaagcg aaatcgattg cattcagaga tgttaaaaat cattttgttc ggaatgaaaa
    29281 tagctactat cattattttg acatgcgtga agatcagtta gaaatactta agcgcattaa
    29341 aaatcacatc aggcacatta atgcaaatga tgtcatgagt gcacatgtgg cacagttatt
    29401 tcatgaaatg gcagaaaatg tcaatgaaaa taactatact gcattacgtt tacacacatt
    29461 atatcaaatt cgtcttgaaa tcgatcaact gcctttacct cagacacatg aagagttgtt
    29521 gacacgttca agtatgattc aaattttgta tgatactgag gaatatttaa cgattaaagc
    29581 aaaatttggt tcactgaaaa tgcatcatga aatttaattg tatacaaaaa caggcgagga
    29641 cactttaaat cctcgcctgt tttttgattt ctgttacatg ctcaataatg gtgcgatacc
    29701 tgttaaaatc aacgcaagta cgatggcaac aagcatcaca atgatgagca cttttcttat
    29761 tttcttgttt aacacgatga taagcctcca aataacctat aataatctca tgtacaatga
    29821 ctgaattata tcattcattc aaataaaagc caaaagttct tataaaaatg atgatggata
    29881 tgtctttttt gcaatctatc caaagttcga taaaatgagt atagaacata agggaaggtg
    29941 acggtatgct aaataaagat agattaattg aaacattttt agaattagtg caaatcgatt
    30001 cagaaacagg acatgaagac attattcaac ccatactgaa agacaagttt gaatcgcttg
    30061 gcctatctgt tgtagaagat aacgcgaaag caacgacagg ttttggagct aataatctga
    30121 tttgtacatt acctgcaaat cgagaaaata aagataaaat ttatttcacg agtcatatgg
    30181 atactgtgga accgggtcgc aatgtgaaac caatcattaa agaagatggt ttcatttatt
    30241 caaatggtac aaccgtactc ggtgctgacg ataaagcagg attagctgtc atttttgaag
    30301 tgctccatat cattcatgaa caacagttac cccatggtca aattcaattc gttattacag
    30361 tgggtgaaga gtctggatta gttggcgcaa aagctttacg taaagaagat ttagatgcag
    30421 attacggcta tgcgattgac tcagcagtac cggtaggcag tatcacgatt ggtgcaccgt
    30481 atcagatgaa agttaatgcg acgatccatg gtaaaaaagc gcatgccagt acaccaaatg
    30541 aagggattag cgcgattaat attgctgctc aagcgattag tcaaatgaaa ctgggccaaa
    30601 tcgatcatga aacgactgct aatatcggta aattccaagg tggggggccg acaaatgtta
    30661 taacagattt agtgaatatt tgggcagaag cacgctcaca tgctaaagat aaactcgatg
    30721 cacaagttca acatatgaaa gaaacatttg aacatgcagc agcacaacat cactgtcatg
    30781 ctgaagttga aactgagtta tcttatccag gctttcatgt tgaatcggat gaacgtgtct
    30841 atcaagtggc tgaacaagct gcaaatgcat taggttttga gatgcaagca gatgtcggtg
    30901 gtggcggttc tgatggtaat attattaatc atcttggcat cccaacagtc attttaggcg
    30961 tgggctatga aaaaattcat acaacagatg aacgtatttc caaacaatcg ttatatgatt
    31021 taacaaattt tgtattaaaa atcattgaaa tgaatgcgta agctaatcaa aggcttcatc
    31081 cgctaatatg tgatacaata aggccataat ttataataag agaggttaag tataatgaca
    31141 caacaaatcg gtgtagttgg tttagccgta atgggtaaaa acctagcttg gaatattgaa
    31201 tcaagaggat acagtgtatc tgtgtacaac cgttctgcag ataagacaga tttaatggtt
    31261 gaagaatcta aagggaaaaa cattgtaccg acttattcag tagaagagtt tgtaaattct
    31321 ttagaaaaac cacgtaaaat tttgttaatg gtaaaagcag gagaagcgac agataaaacc
    31381 attgacagct tattaccttt attagacgat gatgatattt taatcgacgg tggtaacaca
    31441 aactacctcg atacgattcg ccgtaataaa gctttggctg aaagtggcat taacttcatt
    31501 ggtatggggg tttctggcgg tgaagttggt gcgttaacag gtccttcatt aatgccaggt
    31561 ggtcaagagg ctgcttatca taaagtgtca gacatcttag aatctatctc agctaaggcg
    31621 aaagacggta aaccatgtgt cacatacatt gggcctaatg gtgcgggtca ctatgtcaaa
    31681 atggtacaca acggtatcga atatgcagat atgcaattaa tcgcagaaag ttatattatg
    31741 atgaaagatt tattaggcat gtcacatgag gaaatctctg aaacattcaa atcatggaat
    31801 gctggagaat tagaaagtta ccttatcgaa attacaggtg acattttcac aagacttgat
    31861 gaggatggcg aaccacttgt agaaaaaatc atggacaaag cgggtcaaaa aggcacaggt
    31921 aaatggacat ctattaacgc attagaatta ggtgcgccat taactatcat tacggaatct
    31981 gtgtttgcac gtttcatttc ttcattaaaa gatcaacgtg tgaatgcttc aaaagtgtta
    32041 aacggacctt ctgctgcatt tgatggcaac aaagaagaat tccttgaaaa aattcgccgc
    32101 gcactgtaca tgagtaaaat ttgttcatac gcgcaaggtt tcgatcaaat gaaaacagca
    32161 agtgaaatca atgaatggaa tcttcaatta ggcgatttag cgatgatttg gagagaaggt
    32221 tgtatcattc gtgcgcaatt cttacaaaaa attaaagatg catacgacaa cgacaacaac
    32281 ttgcaaaacc ttttattaga cggttacttc aaggatatcg tgactgaata tcaatctgcg
    32341 cttcgcgatg ttgttgcaac aggtatccaa aacggtgtgg cacttcctgg tttctcagca
    32401 agtatcaact actacgacag ctaccgtaca gaaaacttac cagcaaactt aattcaagcg
    32461 caacgtgact atttcggtgc acacacttac caacgtaaag atcaagaagg tactttccat
    32521 acacaatgga ctaaataaga ccttctcaaa tatgaaagag gctaggcgca ttcctggcct
    32581 cttttcattt catctttatg actgcaactc gtgctcatga tagtttttaa taaaatacaa
    32641 catgacaaaa atcatacata tcccactgat tagaaaaacc aaaccgtaac tatacggtat
    32701 gacaaatcca aagaaaatga gcccgagtgg attgagtccc gtggccaaac tttgcaataa
    32761 agcgaatacg cgtgatttat aatcttcatc tatcgttttg tgtatcataa tttgaaatgg
    32821 aacattgtca ataggaatgg caatgccaat caatacgata ccaatgatta tcacaatata
    32881 cgccaaaacg atatcgctat aaaaaagttt gatgatgcga taacgaaaag cgatacaatt
    32941 aaaatgagct tagatagcac agacaatttt tttaaattat ttttcatgtt aaagaaattc
    33001 aatgtaatgt atgttaataa aagtgccact cctaaaatac tttccatcgt tcctaaatgt
    33061 gcagatgaat agccaagttg tgtcacgata ataattggaa gtccgacagt taaagattgt
    33121 tctaaaaagt taatgacgct tgatgttaaa aagagtgtcg acaagttccg atttttaaag
    33181 acatatttaa aactttctgc catcccctct gtaaatttta tgcttttact caccgcattc
    33241 gctggtttaa aacgcaacat aaaaatcaga atcaagccaa caaattcagt gaagctattc
    33301 aatagcgcta aagtattaat gtggacaaga gttactaaaa atcctgccac aatagggacc
    33361 gttatcatcg ttgcagattg aatgttttgt ctagtcgtga caactctctc aaaatagtct
    33421 cgtgtgatgt actacaagtt tgatgagaca atggttttga caatcagatc tataattgct
    33481 aaaacaatca tgacccaaaa aatactcgca atttcttcat gatatgccat tgaaaaaaat
    33541 gaatagcgta acgacactta aaacttgccc taaaatcagc actttttgat tcgaatgtcg
    33601 atcaatcata tttccgaata tcggcatagt caatacttga ataatagcta gaatcgataa
    33661 ataagtacca aatagactgc ctgaaccggt tagttgtaat acataaaagc cgcatgcaaa
    33721 agtgaagatg tctgaaaaca tagttgaaat ggtactaaac aaaataagaa taactgactt
    33781 ctgcatcata ttttcctcct cattccttat ttgtatcata tgcgatacgg gaataaattt
    33841 aaagagtgaa tattcagaaa tatatgtgag ttgtttattt tcccatctaa ctacacacaa
    33901 aataagcaca atcgtttctc atccgtcact gaaacaacgc atctcaacga ttgtgcttgc
    33961 tatagcttta attttcatca atattcacag gaacacataa ttgcactttt gtaaatggat
    34021 cctcgaacga aatatcgagt ggataaatct caatatataa ggcatcgcgt tcaaatggta
    34081 aagtcaattg taaacttgtt tcaatgtagt gccaagcctc acttgtaaca aaatcaattt
    34141 caccttgtaa attaaacacg gcgtattgac gtcctgctaa aaagcgatct tctaaatgac
    34201 caggaaaacg ttcacttggg acaccgacaa agatttcaag tccttgttca agcgggcaac
    34261 tgaccacaaa caattcatgc ggtccgatat cattatagcg gatgatatct tttagcgtgc
    34321 cgtccatttt taaatcttca agaaaatccg gaatgatgaa atgatgttct aattccgctg
    34381 atggtacaaa acgagaacaa ccgactaacg aaaaatcgcc taatgtttct aaacgataag
    34441 ggtagggctt ttgcgaagtt gtcgataatt ttaaataaag tcgttcctgc atttgaagtt
    34501 gatctttttt tagctttgcc tgtaacggtg acaccccatg ataatcacta aagtcgtgtg
    34561 caaatgtatt cgcatccgca tactgataac gttttgcaag atcaatcaaa cgattcgcac
    34621 cgtggattaa atcattagct gcaagtgtca gtctgcgtgc gcgacaatat tcttgaggcg
    34681 tttttccaat aatcatcgta aaagattgtt ctaaatgata aggagaaatt tcaacgtatt
    34741 cacttaaagt ttgtaagtcg aatggttcta ataaatggtc ttcaatataa accattgcgc
    34801 gttgtaaatg tttaatgacg tccaaaattt tcactcctta taactcttaa agtctctttc
    34861 tctcatgatg tatctaataa tttattatat aacaaaaaac agctaagtga cactaaaatg
    34921 tgagtcactt agctgatgtg tatcaatgaa gatgtatgct tatctttatt gaatatcgtt
    34981 ccaccattta aagccgtcac gacttaataa taaatcactg tctaatggac catttgttcc
    35041 tgattcatag ttagggaatt ctggttcgaa atgatcccaa gcttgttgaa ttgaatccac
    35101 aaatttccat gttgatttca attcttccca atgtgtaaag ttcgttgcgt caccttttaa
    35161 cacatcgtaa agtaagtttt cataagcatc cactgtgttc attttatctt gtgcactcat
    35221 tgcataagat aattgtactg gttcagtttc gataccttga acatattttt taccattgag
    35281 gtgaattgac acaccttcat taggttgaat gttaatcaca agtaagttgg aatctaaatg
    35341 tttatccttt tgataatata aattcatcgg tacttcttta aattctacaa cgacttgaat
    35401 cgatttacgt ttcatacgtt tacctgtacg aatgtagaat ggcacgcccg cccatctgaa
    35461 gttgtcgatt tctactttac ctgacacgaa agtaggggta gtcgaatcag cagcaacttt
    35521 atcttcttca cggtaagctt ttacttcttg accattaata aaaccttgat catattgacc
    35581 acgaacaaat tggtttctca cttcatctgg ttgaagcacg tgtaatgatt ttaacacttt
    35641 tactttttca gcgcggatat catcactatt taaactaata ggtggctcca tcgccaataa
    35701 cgcaaccatt tgtaacatat ggttttgtac catatctttt aaagccccgc tcgtttcgta
    35761 ataaccgcca cggtcttcaa caccaagcac ttctgaagat gtcacttgaa tatttgaaat
    35821 gtatttattg ttccataatg gttcgaacat tgcgttactg aaacgtaata cttcaatatt
    35881 ttgcaccata tctttaccta aataatggtc gatacggaaa atttcttctt ctttaaatga
    35941 acgacggatt tgttcattaa gctcttcagc tgatttcaaa tcactgccga atggtttttc
    36001 gataacaaga cgtttaaagc cctttgtatt cgttaaacct gaagatttta agaaatccgt
    36061 tacgacacca aaaaatcgag gtgccattgc taaatagaag acacggttgc cgtctaatga
    36121 aaattcacgg tctaatgatt cgcttaattc taataatttt tggtagcttt cctcatcact
    36181 gacatcgtgt ggttgataaa atacatgttg cataaacttg tctagatgtt ttgtatcttg
    36241 tacgtgttct tgaattgacg atttcacttg agctctaaaa tcatcattag ttaattcacg
    36301 tcttccgata ccaataattg ccactctttc atctaaattg tcttgttgat ataagtgaaa
    36361 gagtgatgga aaaagtttac ggtgacttaa atcaccagtg gcaccaaaaa ttgttatgag
    36421 tgctggaaca tgattaattg tcttattcaa gattcaaaac cccaattctt aattttagtt
    36481 catacattaa tgatgtgttt attatagaac atatcgcgtt ttcggtcata tattctgctt
    36541 tacacttaaa atttgccgtt tgttcgtcgt tttatgataa tataacgcta aaggaggtac
    36601 gatgcatgga aattacattt ttcggtacaa gtgctggatt acctacaaaa gaacgccata
    36661 cacagtcaat tgcgcttaaa ctcgaaccgt atgcgactga tgtttggtta tttgacgtgg
    36721 gtgaagcaac acaacaccaa atattacacc attcaattaa actcggaaaa gtcagtcata
    36781 tttttattac acatatgcat ggcgaccatg tattcggttt acccggtgtg ttgacgagcc
    36841 gttcatttca aggtggcgaa tccaaaccat tgactgtcat aggacctaaa ggcattaaag
    36901 actatgttga atacaattta tcactcacat attcacatct taattatcca ttacatatca
    36961 ttgaaataga agatcaaatg aatttatcta ttaatggatt cgaagttaac gcacgtccac
    37021 tgaatcatgg tatcccgtgt tttggctatc gtattcaagc gcctgatacg ccgggtaagt
    37081 tagatgtgca aaaattacaa gcacttggta tgcctccagg accacagtat caaaaagtga
    37141 aatcacaaga tacttttgaa tttgaaggtc aaatctataa tgccaatgac tttaaaggac
    37201 ctgataaaaa agggcaagtg gtgacgattt ttggcgatac acgaccgagt caatatgcgc
    37261 ttgagctggc taaagatgcc gatgtattag tgcatgagtc tacttatatt gatggcgata
    37321 aaacattagc gaatgcgtat catcatagcc atattgaaga tgtcctcgcg ttaattgaaa
    37381 aagctagcgt aaaacacgga ctcctcacac acataagtag tcgttacatg aaagaagata
    37441 ttaatgaaat cgaaacgaaa ttgaaagtcc attcgccatt atccttccaa tttgtagaag
    37501 atttcgatag ctatcagttt taatgtcatt atattgctat acaaaaagaa agggtgggag
    37561 catatcaata tcatgttttc ccagcctttt cctagtttta agttatgaag ttactttgca
    37621 cgcacacagt taagttgatt tatccactta atcatcatct tgtgctgaga gttcgatact
    37681 tctattcacg gcagcattta aacaatcctc aaatataccc tcgatgtcat attcagataa
    37741 agcgtttaaa cctgcttgtg tggtaccgcc ttttgaagta atgttttttc ttaattgctc
    37801 catacttaaa tctgaacgtt caatcatttt actcgttccg ataattaatt cgcgaatcga
    37861 ttcttccact tgcgattttt ctaaccctaa ttttgttcct gcaatcacat attgttcgaa
    37921 gacatggtat aaaaatgcag ggccacttcc tgttatcgct gtcacttggt gtaagtgatt
    37981 ttcctgtact tctaatgctg taccgaatgc attaataatt tctaaaattt cgtccttcgc
    38041 tttaccccca aagtttgaag aaaagctcac tcctgtcaca gaatggccga cgtgggcatt
    38101 tgtattcggc ataatgcgtg caatcggatt cgtcgtgtca agcttttctt taatgtaaga
    38161 aataggaagc cctgccataa tagaaataaa tcgattgttt ggctctacat gtagcttaat
    38221 tctgtcagcc aattgatcga agtcatgtgg tttcgagcct aaaaagatat agtcagcatc
    38281 ttttaacaag gcggcatcgt cataactata ttgaacacct aaatcttctt catattcttt
    38341 caacatgtct tcgtttgaac gatttgttaa ataaatgttg tctgctggaa caacttttga
    38401 atttagaata cctgtaaaaa tcgcatgcgc catattgcct gcaccataaa atacaatttt
    38461 catacgaact atcacttcct aaaagtattt tcttgtctta tagtaacata taaccacatt
    38521 ttattgagtc aaatagggga gagatacaat gcaacaaggc cattttttaa ttactggtgg
    38581 tacgagcggt ttagggtatg cactcgcaca agccctcata tctgcccatt tttctattac
    38641 actacttgta cgtgatgtaa acaaagcaag atcgttattt ccaaattcag aagtacaaat
    38701 aattcagtgt gacttgacga cagaaagtga tgtaaatcaa atagctcgac attttaataa
    38761 ccaaacgcaa tttgatggcg tgatacactc agctggactc ggctatttta aaggattact
    38821 tgaacataca cctgtagaaa ttttacaaac gtatcaagtg aacgtggtgc atttctcaat
    38881 gttaatcaat caatgcgcac cttttttaac aaagcatgct tctattgttg gaatcagtag
    38941 tcaagccgct ttagcaacac aaccttatgc agcgcattac ggcggaagta aagcagcctt
    39001 taatcatgta cttaacgctt tacgtatcga acaaccccaa tggcacgtgc tcaacgtcaa
    39061 tgttggaccc attgagacac cttttcatgc aaaagcagat ccatctggtc gttatgcacg
    39121 taaaatgaaa aaaataatgt tgaaccctga acaactcgcc gaaaagattg ttcacgcgat
    39181 tcaacatcgc caacaagaac tgaatatgcc tcagtccgtt cattttttac ttaaacttta
    39241 ccaactcgca ccacgttttt ttgagaaaat aggacgaccc tttttcttag ggaagaagca
    39301 ctaactgtta ggcatttccc aatgttgtgc atagtgtaag tgtttcacta tatcagaggc
    39361 ttgttctaaa tgtgctgggt tgacttcttg atgatagtgc gtcacatttt gttgtaattg
    39421 ctcaactgaa cttgcaccga caatgataga acctaaaaca tcaaatgact ttaaataatt
    39481 gaatgctaat cctgtcaatt ctgggttcat ttgctgtaat gccgttacag tttctttcag
    39541 ggcatgatga tcatagtcaa aaatgccctc agcaaatttt gttgttaaca ctttttcagc
    39601 acttggcgtt aataaacctt tgaatacagg accgcgtgcg agcaatttca cacctttgtc
    39661 ttggacctca tccaataaat cgatgggtct attatcgatt aaattgaatt gagtcattaa
    39721 cgtttcgatt tgactatatt gtaaataata acgaatcaca ttaggacgaa ttgaagaaag
    39781 accatacgca cgaatgacgc cttcttgttt cagttcatca aacgcactaa ttgtttcatc
    39841 aagtggatcg tcaatcgtac ccccgtgtaa catatataaa tcgagtgtat ctaatccaag
    39901 ccgttgtaat gagtttttca catttccttt aatgtaacgt ttggaaggat cccaaaatgt
    39961 ttcaccgttt tcctttaaat gattccccac ctttgtgcct atcacaatat catcacggtt
    40021 ttgatacttt ttaagtgtgc gaccaacgat tttttcattg accccttgat cataaatatc
    40081 tgctgtatca aaatatgtaa tccctgctgt cactgctgca tcaataattt cttcagcttt
    40141 attttcttct gtacctaaac tcatacatcc aaggccgagc tcagataatt cgataccact
    40201 tttcaaaaca tttttttgca tgatgccact ccttccgata aaatcattgt atattcatga
    40261 tagcaaaccg tatgaatatt tgaaaaggag aggactcacc atgcattttg aagaaaaaac
    40321 tatttctaaa gaatccattt ataaagggaa aattattgaa gtagaaaaac ataaagtgtc
    40381 tttaccaaac aatgagaccg cttatcgtga agtggtaaaa cataacgggg cagtcgcaat
    40441 ttgtgcttta acaccggatc aacaagttat tttagtgaag caatatcgta aagccctaga
    40501 acaagagttg ttagaaatac ctgcaggcaa acttgaacct ggagaagacc gcgaatctgc
    40561 agcgatgcga gagcttgaag aagaaacagg atataaagca aagaaactca ctttaattgg
    40621 tgaagtttat ggcacacctg gtttttcaaa tgagaaaatt tctgtttatt ttgcagataa
    40681 tttagttgaa ggtaaagtca acctagatga agatgaattt gttgagaaag tgctttattc
    40741 attagatgat gttaaaaaag ctgttgaagc ccgtacgatt gaagatgcga aaacattcat
    40801 tgcatttcaa catctattat tacattataa tcattctaaa taagaatcga aaaaaggttg
    40861 ctttttttct caattactgg taatttataa caagaaaaca tgtctaattg taataattat
    40921 aattttcagt agaggagtga ggcttccgtg gaggaaagac tgaatcgcgt gaagcaacag
    40981 ttgcaacaat cttcttacaa attaacaccg caacgtgaag caaccgtgcg tgtattgatc
    41041 gaaaatgaag ctgaccattt aagtgccgaa gatgtttatc taaaagtgaa agaaaaagca
    41101 ccagaaattg ggctcgcaac tgtttaccgt acattagaac tattagcaga tttgaaagtt
    41161 gtcgacaaag tgagttttgg cgatggtgtt tctcgatttg atttacgtaa agaaggctca
    41221 aaacatttcc accatcattt agtttgtatg gaatgtggcc gcgtagatga aattgaagaa
    41281 gatttattac cgcaagttga agaacgtgta gaaaatgaat ataactttaa aattttagac
    41341 catcgtctga catttcatgg tatttgcgaa acttgtcaaa aagaaggcaa gggggctaaa
    41401 tgataatcaa gtacagttct tgaacagaat tgggggcaat ctatggaaga aattcgagat
    41461 gagtatttaa gatttattca aattgaaaaa gggctatcca acaatacgat tgctgcttat
    41521 cgccgtgatt tgaatcatta tttgaactat ttggctgagc ataaagtcgc gaatttgaac
    41581 tttgtggacc gccaaatgat tcaagagtgg tttggttttt tacatgatga agggcgctca
    41641 gcaaaaacca ttgcacgctt tacatctaca attcggagtt tccatcagtt tgctttaaga
    41701 gaaaactata cctcacatga tccaactgta cttatcgaaa cgcctaaata tgatcgtaaa
    41761 cttccagatg ttttatctat cgcagaagtt gagcaattat taatggcgcc tgacgaatcg
    41821 aaagttaacg gctatcgaga caaaacaatg ctcgagctac tgtatgcaac aggtatacgt
    41881 gtttctgaat tgatcaatat tgaagttgag gatatcaatt taatgatggg ctttgtcaaa
    41941 gttttcggta aagggagtaa agaacgcatt gtcccattag gcgaaacggt cattgattgt
    42001 ttaacacact acattcaaaa tattagacct cagttattaa agcatacggt cacacatgtt
    42061 ttatttttaa atttacatgg caaaccactc tccagacaag gcgtttggaa aatgattaag
    42121 caaactggtg tcaaagcagg gattatgaag cgtttaaccc cacatacatt acggcattca
    42181 tttgcaacac atttattaga aaatggtgct gatttacgtg ctgtacaaga tatgttagga
    42241 cattctgata tatcaacaac acagttgtat acacatatta cgaaaaatca aatccgtaaa
    42301 atttaccaag actatcatcc aagagcgtaa aatggatggg taagaagcta accgttcaca
    42361 cttcataccc atccattttt ttgtatttaa tgataaaaat cgttcacaat catacaaacg
    42421 aaatttttag tacattccaa taatgatttc aaaatcatca cagtgtttga aatacgttac
    42481 ccagaaagat aacaggaacc acccgagact cccgatgatc agttggccat taaagacgcc
    42541 taacatgtta catagaagcg tcatttaaca atcttgtaga atcttgattt agcctcaaca
    42601 aatgaggggc ttgagattat ttccttcttt cctctaaagc cgcttctctt gctgtaatga
    42661 cgtcacttct atctctcaac tgatgatgat gtaagatcat tggtgtctct accactgtat
    42721 cagtcacctg aaaacccgga aactgcgtct taactttcac aatcatcgtt gctgtgaggg
    42781 ggagctgaat cggtgaaaac ggaatttctt gtgcagtatc ctgtatcaat tgtgttaata
    42841 tatttaaata ggcttttcgt acaagtccta aagtggccat cgtctcttca gaataattga
    42901 ctataatttg ataagctttg ttaaatgttt tatgcgcacc tttaaagtta ccacgacgat
    42961 aatgataact tcctgttgca agcaaaatca aactaacgac cgcatcttgt tttgaaaagg
    43021 cgtgttgcat tttccatgct tcttctaaaa tatcatgaca gagaaaataa tgctgttcat
    43081 gatgaaactg atagtaaaaa tggactaaat cattttccaa catggctcac tccaaaaatt
    43141 tattgttata catcaaacat gttataatat tttttgttat tatgcacatt acatgcgtta
    43201 tgaaatgagg tacagatatg tacgaagtga aactagatgc ttttaacggg cctttagact
    43261 tattattgca tctcatcaat gaatttgaaa ttgatattta tgacatccct atgcgcgaat
    43321 taactgaaca atatatgcag tacgttcacg ctatgaaaaa attagagatc aatattgcaa
    43381 gtgagtattt attgatggct tcagaattac tgatgattaa aagtaaaatg ttgttgcctg
    43441 atacgtcatc tgatttagtt gaagatgaag acccacgtga ggcgctcgtt gaaaagttaa
    43501 tcgaatatca aaattacaaa gcttattcag aaatgttaga agagaaacgc caagcacgtg
    43561 aacattattt cacgaaacca ccgactgacc tttcacatta tgaatattct gagcgccttc
    43621 ccgaaaatac gacgattgat ttaacgaaac tgatcgtcgc ttatcaaaaa atgaaaacac
    43681 gagtctcttt gaagaaaccg actactgtgg atattcgaaa agaaacgtat accatccaac
    43741 aatcaacgac atacatttat gataaattaa agaaagttcc tcaaattaca ttttttgatt
    43801 tatttacatt taatgaatct atcgaacacg tcgtcacaca ttttctggct ttactcgaaa
    43861 tgtcaaaaac aggcatgata caattgcaac aagtgaaagc tttccacaac tttgaaatta
    43921 gaaaaggagt aaattatgac gcttaaagtt actgaagcgc taactgcgat actgtataca
    43981 gttggtgagg atggtattga tgaggcacaa ctgctggcat cactcgacgt ggattacgaa
    44041 acgttaaacc gtgcgatcga tacacttgag ttacctgggc tcatggtaca aaagttcggt
    44101 caaacttatg ttttaacgac ccaaaaagaa gcagaaccgt atatcgaatc actcatcatt
    44161 aataaagcat ctaccaaatt gtcacaagct gccatggaag tgttagccat tatagcctat
    44221 aatcagccaa tgacacgtaa tgatatcgaa ttgatacgcg gaattcaatc tgacggtccc
    44281 gttaaaacat tgattgctaa aggattggtt gaacctaaaa ctaatcccga agcacgtgga
    44341 caacagctct ttacaacaga tttattttta aatgtctttg gtttggaaag tcttgaggca
    44401 ctcccaacaa cagatgaaga agaagaggaa attgaatcgt ttttcagcca actggtgaat
    44461 cagaaaggag attcttaaat gagtcaacaa ttagaaagat tacaaaaacg tattgcgaac
    44521 agtggttata cctctcgacg taaagcagaa acattaattg aagagggcaa agtacaggtc
    44581 aatggtaaaa ctgtcactga attagggaca aaagtacgtc catctgatga agtgaccgta
    44641 gaagggatac cacttgagca agaagacaaa ctttatatcc tgttctataa acctgcgcaa
    44701 gtcattacga gcgtttcaga tgatcgtggt cgaaaagtcg ttactgatta ttttgatgac
    44761 ttagtaacac gtatttatcc agtgggtcgt ttagactatg acacatctgg actgctgtta
    44821 ttaacaaatg atggtgaatt tacaaactta atgacacatc cacgctataa aattcccaaa
    44881 acgtatgttg caaaaataga agggtatatt ttacgtgaac aagtgaaaca acttgaaaaa
    44941 ggaattcaac ttgaagatgg actcacacaa cctgcaaaag taaaagtgaa aaagcaaaat
    45001 aaagaaaaaa atacgtcact tgttgaaatt accattactg aagggcgaaa ccgtcaagta
    45061 cgtcgtatgt ttgaacattt tggttttagt gtacaaaagt tatcacgcgt ttcatttggt
    45121 ccgctcactt tgaaagggct cggcgctgga gaagggcgtg tattgtcacc acatgaagtg
    45181 aaatcacttc gtcaccttgc agagaacggt caacaacaac gttaactatt attcaagtca
    45241 gcacgcacgt cattgtttta ttattacccg aagaaatcat tatggtataa tatgctttga
    45301 gttagaaatg tcaccatgtg tgggaggtat gtcatgatga ctaatgaaat cttagtcgta
    45361 gatgatgaac atcgaattag aaaattatta aaattatatt tagaaagaga aggttatgtc
    45421 atcgcagaag ctagtgatgg acgcgaagct ttagacatgg cgacaaaata tgattattca
    45481 tgtattttgt tagatttaat gttgcctgaa atggacggtc ttgaagttgc ggttaaatta
    45541 cgtgaactta aagatacgcc tattattatg ctcactgcaa aaggcgagga aaataatcgc
    45601 gttgaaggtt ttgaatcagg tgctgatgac tacatcgtta agccattttc accacgcgaa
    45661 gttgtgttgc gcgttaaagc gttattacgt cgtacagaat cttcaaaagc tgaacaaaat
    45721 gagccgcatg cccgtgatat gattgaattt aaacatttaa cgattgataa tgatgcacat
    45781 aaggtattgg ctgatgggac gccggttaat cttacgccaa aagaatatga attactcatt
    45841 ttcttagcta aaacacctaa taaagtattt gatagagaac aattattaaa agaagtttgg
    45901 cattacgaat tttacggtga tttacgtact gtagatacac atgtcaaacg tttgcgtgaa
    45961 aaattaaatc gtgtttctgc agatgcagca aaaatgatac aaaccgtttg gggtgtaggg
    46021 tataaattcg aagttagcaa gtcggatgaa acgacttaat aacgttgtcg taaaactgtg
    46081 gttaactatt attttaatag taacgacagt tttaatttta ttaagtgctg cattaatcac
    46141 gtttttccaa tattatttca cgcaagaaac tgaacgtgcg ctctatcaaa gtgctgaaaa
    46201 cgtaaaccaa gtattactta aaaatgataa tcgaaaactc gccattgaac atagtgaagc
    46261 tttgttagag gataataaag gcctcattat cttacccgac cgtgcgcata tcaatgaaaa
    46321 agatactgtt aaaaagaaaa tgcttaaaga aattagtgag catccaaatt ttgaccgtgt
    46381 actaaaaaat aatcattctg agttacaaca cgtcactttt aaaattgatg gtaaaacgca
    46441 tacttatgta ttactcggtt atccttctaa agataacaac ggccaatctt cagcgatatt
    46501 tatttatcaa gatttaaaga gtattgatga tacgaataac atcattacgg ttatgatttt
    46561 aattacagct gtcgttttcc tagccattac aacggttttc gcatttttct tatcaacacg
    46621 tattacgaat ccactgcgtc aacttaaaac ccaggcgaaa gaagtcgctc gaggaaacta
    46681 tgacaagcgt gtaccaattc aaacgagaga tgaaattggc gagctcgcga tgacttttaa
    46741 caaaatgagt cgcagtattc aaacgcatat cgatgcgtta acgacatcta aaaatattcg
    46801 tgacaccctt attaattcaa tggttgaagg ggtattaggt atcaatcata aaaaacaaat
    46861 tattatttca aacgctttag ctgaacggat gctttcagaa tttaacgaat ccgaccgcga
    46921 aatgtttaat ctacaaattg aagatacatt tgagagtcaa aaaacggaat atcgagaata
    46981 tgaaatgaat caacgttttt atgtgattat tatgagtcat attaaaaaaa ttcaaactaa
    47041 cggtgaaggc ggccttgttg ctatcgtacg tgatatgaca aacgaacatg agcttgaaca
    47101 agtgaaaaaa gactttatcg caagtgtctc tcacgaattg cgcacaccga tttcattatt
    47161 acaaggttat accgagtcga tcgtggatgg tgtcgtcact gaaccggaag aaatcaatga
    47221 atttttgacg gttgtattag acgagtctaa acgattaagt cgcttagtca atgaattgtt
    47281 gaatgtcgcg aaaatggatg ctgaggggtt gaatgttacg caagaattgc aaccgatgca
    47341 agatttagtt agaaaaatgg cgatgaaata tcgtcaacaa gcacaagaac taaatttgac
    47401 cttagatttt caaatggacg gcgagatggc ttcactttgg tactatgact ttgatcgcat
    47461 ggaacaagtg ttgacgaacc ttgtcgataa tgcgtcacgt tatacacaac ccggcgatac
    47521 aatttcaatt aaagcaacgg cggatcatga ccatcaaatt ttaactattg aagacacggg
    47581 cgttggtatc gcacctcaac atttagagaa acttttcgag cgtttttata aagtggactc
    47641 tgcacgtaaa aggggctcac aaggaacagg gcttggattg tttattacac gcatgattgt
    47701 aaatgcgcat ggtggtcaca tccgagtaga aagtgaactc gacaaaggaa cgaaatttat
    47761 catttcatta cctaaaaaat cacatgtaga agaaattgat taagcaagga tgaatttcta
    47821 caggaacgac gatatctcat tttaaaatcg aggtatcgcc gttctttatt tatatcttca
    47881 ggatgtttaa gttgttgcaa atagattgta ttcaaaagtt atctcatgta aactattaac
    47941 gaaaataata aaaaattaat tcatcttcgg ggtagggtgt aattcccaac cggcagtaaa
    48001 ataagcctgc gacctgcaaa tgatgttcag catctttgtg gctgatctag tgagattcta
    48061 gagccgacag ttaaagtctg gatgggagaa gatggaggtt tatttgtgtt gctctttatt
    48121 cctcctattc gtgaaagatg aatttaatgg gaggtctttt ttatgaaaca aaagcaaacg
    48181 aaacgaatga taactgtagg gatgttaagt gcaattgcaa ttgtactgac atttataaag
    48241 tttccgttgc catttttacc gccatattta acgattgatt ttagtgatgc accagcatta
    48301 ttggcgacat ttacactcgg gccggttgcg ggtttgctcg ttgaactaat taaaaactta
    48361 ctgaatttct tttttaactt aagtgatcct gttgggccaa ttgctaactt tttagcaggt
    48421 gcgagtttat tacttgtaag ttatggaatc tatcgtaata atcaatcaac aaaacatctc
    48481 attttaggat taattactgg tactattgtc atgaccattg tgttagctgt catgaattat
    48541 ttcgtgttac tcccactcta tggcatgata atgaacctta ctgatatcgc gaataatctt
    48601 aagttgatta tcgcagcagg cattattcca tttaacatca tcaaaggcgc attgatatct
    48661 attattttta tattgctcta tcaacgcatt ggacatattt tgaaataaat atcttaacag
    48721 gctgggacat tgtggtttcc agcctttttt atagtcaatg agtgaagcaa tagttaaaca
    48781 ataaagctgt tgatgtaaag aatgttcgga tatgatttct atcaatacaa agcggatttt
    48841 tattcaaaac ataaaaaata gattgagtag catggtaatc aaaccatttt tctactcaac
    48901 cctcatctta gtttacttag accttaagtt gttttatatt aatattaaag acaagtgtcc
    48961 tcaatatgaa ctattcaaat ttgagtgcgt caccatcaaa tgactcctct tcaactttaa
    49021 tagagtcagt agggcaacct tcaaaagcat cttcaagatc ttcatacaat tcttctggta
    49081 ctggcgttgt accttggttg tcatctaaaa ttacatatgc aataccttca tcgtcgtagt
    49141 cataaatatc tggagcagct gcaccacatg caccacaagc tatacaagta tccatatcaa
    49201 caattgtata tttagccatt ttttcgcctc ccttttcaaa gtaccatact cacattataa
    49261 ttttattgta gttctgtgta cccgattttt caatatatac gtttttaacg aggtctaaac
    49321 atgaaacaat taattctata tctctatcat catgcatcag cctacaaaac taaaaaaagc
    49381 atctttaata ttatcatagg taaaaaatct catcaaactt tttttgatgc tgtttcttta
    49441 aatatattat cactctatgg ctgtgcaccc aaattaaagt atgaacagtt ggaacaaatg
    49501 attagtcatg agtcatacca tcatacgact attcaaacaa gcaatcgtat gacgtattca
    49561 actttagacg ctacttttaa agcatttcag ctattagttc aaacggtttc tcatattcaa
    49621 cacaatcaac gtacattttt gcctattaca tcacaagtcg acattcacga agttgtacgc
    49681 cttatttatt atgaaattga gcaacagcaa ttacaagatg catttgaaga agaggtcaca
    49741 acattattta aaatgctatc cgagaaacat gacacattat atacgcatta cttattgact
    49801 ggatatgacg aaccgatgta cacgtttgcc caaataagca tgattgagtc cattgatatc
    49861 catgatttgt atactgcata ttacgaagag ttattatcca tttatctttt cattcaaaat
    49921 gctgatacgt ttccaatact ttcacaatgt atcatgccta tagaattatc cgatcgagta
    49981 atgcaaacgt tacaattgct acaaaaagga tattcaatag caaaagtcgc acaaattgag
    50041 caagtacggg aaacgacgat aaaagatcat attcttgatt tgtttatgaa acagctttta
    50101 acaaactatg atgatttttt cacgcatccg tataatgaat ttcttaaatt ttatcaagcg
    50161 cacccctatc aacgattaaa actgtacaaa gaacaatttg acacattatc ctattttgaa
    50221 cttaaactcg cgattattgg cagcgcaaaa ggagaattac atgcttaaag atgctttaaa
    50281 acaatatttt ggttttacaa cattccgccc cggtcaagaa agtattattt caagcgttct
    50341 agaagggcaa catacactcg ggattttacc gaccggaagt ggtaagtcgc tttgttatca
    50401 actaccaact tatatgaagc aacaaccgac cttggtcatt tcgccactca tttcgttaat
    50461 ggacgatcaa gtgatgcaga tgaaaatgca aggagaacac catgtcgtcg cgattcattc
    50521 agggatggaa caagcggcca aaaagcgagc gttccaacag ttaacacaag cccgatttat
    50581 ttttgtgagt cctgaattca ttttacagcc gcaccatttt catcttttca aaaatatccg
    50641 attcggcatg attgtgcttg atgaagtaca ctgtttatct gaatggggat ttgattttag
    50701 accacactat gccttgatcg gtaaagtgat acgctatttt aacgaagcca ccatacttgc
    50761 actgacagcc actgcaacgc gacacttgaa agatgatatt cagcgtgtca ttcaaaaatc
    50821 aattcatgtc attgaacact caatggaccg accaaatgtg gcattatctg taaaattcat
    50881 gttatcgtat gaagaaaaag tgaattggtt aattgataca attgcgacgt ctggtcctac
    50941 cattgtctat gtgtcttcca aaaaggtcag cttagattta gcaacttcaa tttatgaagc
    51001 agggtattta acgggaatat accatggaga tctatcttat caagagcgtc ataccgttca
    51061 acaacagttt ttaaacaacg acatacgaat tatcgttgca acaagtgctt ttggcatggg
    51121 cgtcaataaa ccagatattc gtaccattat tcattttcac gtttcaacga caccttcaag
    51181 ttatctacaa gaaataggac gtgcgggtag agatgggctt ccaagtcaag ccattgcact
    51241 gtttcaacca gacgaccagt atttaatgga gacgttggca ttagtgaata tcatgcatgc
    51301 ttcagatgtg gaccaatatg aagtcggtca aatgattgat agtgaaaaac gtgccatttt
    51361 agatgtatta actgaagctt tttcatttca acaacttaga caaatattca ctcaaaatga
    51421 agacatgaaa agacaaggtt atcgtcatat gtatcattat attttaacca aacaatgccg
    51481 acgtcaacat ttattgaatt actttggtat gacgaaagaa accacagatg catgttgtga
    51541 tcaatgcgag gcacttagtc cagtttatga aaaaaataag aaaaaagtta aaagaaagtt
    51601 aacttacatt gaaaagttgg aaaatttgtt tcattaattt tcacaatgct ttcactttta
    51661 atttaaaccc gttataattt agggtaaatg gtattaggcg atttaacgac aacaaagaat
    51721 taaatagatg tgatgaattg atattgatcg tatcaaagtt tatactttca aatcgttatt
    51781 gtacatttga tatggaaagg atgaatgtta agtgtcaaaa gataatttca aagatgagtt
    51841 tgaacgcagt cgtcaagaaa ttaagtccca tcatcatgac gaggacgaga caactgaagc
    51901 aataaatgaa aaagatgatc aacctcaagc aagtcaggaa cagcaattcc cgccacgaaa
    51961 tgcttctaga cgccacagaa aaagagattt cggtatatca aaagctaaac ctacacaaaa
    52021 agatacgcag actaacccac aagaagcagc agctgacaaa aaaacaggtc cgattggtgg
    52081 cgttaaaaag agtgatgaca atcaccttaa tcacacgcaa catgacgctg aaggcaaacg
    52141 tgcacaaaca gctgattcaa tgcaaaatga accagcgaaa gaggatacga aaggtcaaag
    52201 agctgcaaca tcaggccata cagctgttgg aactggtgca aatgttcaaa tgacaaataa
    52261 taaaaagcaa caacctaaag tgacaaatga agcacaaagc aatcaacaag gagagcaaca
    52321 agaaccccgc aaaagtaaaa aagctttggc cactggggca ggtttaggcg cgacaggtgt
    52381 ggcaagagcg ggcatggaga aaaatgacca aagtccaaaa caagacgaaa atccaacttt
    52441 agaagacagc aaacctcaag ggaacaaagg aaaaaaagct gcggcaggtg tgtcgactgg
    52501 cgcagcaaca ggtttaggcg cttcaaaagc tcatgcgcaa caaacaccag aacgtcaacc
    52561 agaaactgaa tcttcagaga cgactgtttc aaatggatct ggcggtggat ttttcaaaaa
    52621 gcttttaccg ttactagcgg cgattattct tttaggtaca gttgcgattt tcggtggcat
    52681 gtatctcttt aatcaagatc atcaaaatga taatcagcaa gaagtcgcac aaaaagagga
    52741 tacgaagaaa aattcagatg acaatcaaca aagtcaatct aaaaacgaag acgataaaca
    52801 agatgattcc gataaagcga cagcttcaaa agatagcgac gacaacagta aggatgacaa
    52861 tgatcaatca gagtcagacg ccaataatag tgacaattca aatgcttcag atccaaatga
    52921 gacatccaat ccgaataata gtcaaaacga cgtaaataat agcaatatca ataaccaaca
    52981 aaacacttat caacaaggcc aatctgctgg cggacagact catgtcgtga atggtaacca
    53041 aaacttatat cgtatcgcta ttcaatatta cggtaatggt tcacctgaaa atgttgaaaa
    53101 aattaaacgt gcgaacggtt tacaaaataa caacatttcg aacggacaac agctcatcat
    53161 tccataaatt tgataaatgc agccttatcc tgaatcaatg gataaggttg ttttttattg
    53221 ccgttctatt tgcaatagtg actgtcacaa acttttccat ttagaatcac tataaaagtt
    53281 gatataatat acaaggatta tcacagttct tatcatatac gatgctagta tgagaattag
    53341 gaggcaatat gaaacattaa agtagcataa ttgacgtttg tgaacgcaca tttttaatgt
    53401 ttcagtataa aaatgaaaac tgtagagagt attattatag gcggtggccc atgtggactg
    53461 agtgccgcca ttgaacaaaa gaaaaaaggt attgacacac tagttatcga aaaagggaat
    53521 attgtggatg cgatttacca ttatccgaca catcaaactt tcttttcatc tagcgataaa
    53581 ttaagtattg gtgacgtgcc ttttattgta gaagaattaa aaccacgtcg aaatcaagca
    53641 ttagtgtact atcgtgaagt tgttaaacat catcaactta aggtcaatgc atttgaggaa
    53701 gtgttaacag tgaaaaaaat gcatgatcac ttcactttaa caacgactaa agatgtatat
    53761 caatgtcgct atttaactgt tgcgactggt tattacggcc aacataacac gttagaagta
    53821 gaaggtgcag agctatccaa agtaatgcat tattttaaag aaccgcatcc gtattttgac
    53881 caagacgttg tcatcatcgg tggtaaaaac tctgcagtcg atgcagcaat tgagttagaa
    53941 aaagcaggtg cacgtgtcac tgttatttat cgaggtgaga cgtattcacc agcgattaag
    54001 ccatggatat taccgaattt tgaatcactc gttcgtcgag gtaatgttca aatgcatttc
    54061 aatagtcaag tgacaaagat tacagaagat caagtgatgt ttgaaaaaga aggagaaacc
    54121 atcacaatcg ataatgatta cgtgtttgcg atgattggtt atcacccaga ttatgacttt
    54181 ttgcaatcta ttggtatcga cattcatact aatgaatatg gaacagcacc ggtatacaat
    54241 tccgaaacgt atgaaacgaa cattgaaaac tgctatatcg ctggggttat cgcggctggc
    54301 aatgatgcga atactatttt tatcgaaaac ggtaaatatc atggtgaagc cattgcccgt
    54361 catatattga ctaaaaagca atcgccatta gaatcataaa ttgtatgagt gtttactcaa
    54421 aatattatca aaaagccttt cgtcgttgat attactgatg aagggcattt aattttatat
    54481 gacatgacgc atttttattg tgtaattttt tcaatatatc ataccatggt tgtgaatgtg
    54541 gagagtagct cacgcatttc atacatttca tatctaaaaa agaatgaaca catgatactg
    54601 tgtaaatgca caaaaaatag ccgtatctca attccacaat taagagcggc tattttcata
    54661 atgatatctc ttttttatat agacctcgtg tcgttttata cattaaagta atcttgaatt
    54721 tgatcatgtt gaaaatcgtt gcttaatgcg acgagtaact ttaatctcgc tttttggccg
    54781 ttcaaaccgt ttgaaaaaat cacacctttt tcaaataatt gatgaccgcc accttcatat
    54841 gcataaaccg cactcactat cccattaaat gatcttgata ctagaacaat aggaatattt
    54901 ttatccaaac atgcattgac acctggcatg gcagtaggag gaagattacc ttgtccgagc
    54961 gcttcaatca cgagaccatc tacatgacgt tctgcataaa aatccaacat ttcgcatccc
    55021 atacccatat gtgctttaat taacggaatt tgtagtgaag cattaatatt tgttaaaaat
    55081 tgacgcgcat acggtctatg gtgaaaatag acacctgctt tagtaatcac accaagcgga
    55141 ccgtggttgg gactttgaaa cgtattcgtg tttgaagtat gagttttcgt gacattacgc
    55201 gctgtgtgta tctcatcatt gaaaaccacc atgacacctt tacctgcgga ttcttcttca
    55261 atcgctactc gtatagctga aataaaattg tataaaccat ctgacccaat ctcattggaa
    55321 gaacgcatag ctcctgtaat aacgactggt ttagacgtcg aaatcgttaa gtctagtaaa
    55381 aaagcagtct cttctaacgt atcggtgcca tgtgtaatca cataaccatc atagtgtgtt
    55441 aaatggtctg ggtcctcaat gatttctttt aaaattttga cattatcaat tgtcatatgt
    55501 ggagaaggga cgttaaaagg cacctgttca tctatgttag cgtactgtgc aatgacatct
    55561 tgatgatgcg taatcggatt gtcgtcattc gtcatcactt tattcgattc atcttctgac
    55621 atactaattg tgccacctgt atggatgact aataaatttt tcatttagct tcctcctcgt
    55681 aaaatagtcc attattatga taaaatattg ttaaacaaac gacaaggaag gtaacgtatg
    55741 aaagcgatta atattgcatt agatggaccg gcagccgctg gtaagagtac gatagcaaaa
    55801 agagtagctg ctcaattagg catgatatat gtagatacag gcgcaatgta tcgtgcaatc
    55861 acatactatt atttaaataa caaagaacga ttcaccgact ttacatcact catttccgaa
    55921 attgatttac gcctcggtta tgatgctgaa aagggtcaac gtgtcttttt gaatgataat
    55981 gatgtgactg attttctacg tgaaaacgat gtaacgcaaa atgtgtccta tgtttcgtct
    56041 ataaaagagg tacgtcaatt tttagttcaa gtgcaacaaa aacttgcagc ggacaagggc
    56101 atcgttatgg acggccgaga cattgggaca accgtacttc ctgatgcaga agtaaaagtt
    56161 tatatgattg catctgtaga agagcgagct gaacgtcgtt ataaagacaa ccaagaaaga
    56221 ggtatcgaat catctattga gcaattgaaa aaagatattg ctgaacgaga tgcatacgat
    56281 atgaacagag aaatttcacc gttaaaaaaa gctgaagacg caattgaaat cgacacaact
    56341 ggcttgagta ttgaacaagt cacagataag atcctgtctt tagtaaatgc ggtttaattt
    56401 attttattct aacttatcta aatttcttga caattcaaga cttttataag aagttattat
    56461 tatgtagtag tataaggagg caatcatgat gactgaagaa ttcaatgaat caatgattaa
    56521 tgacattaaa gagggcgata agattacagg agaagtacaa caaattgaag ataagcacgt
    56581 tgttgttcac gtcaatggcg gtaaatacaa cggtattatt ccaattagtc aactttccac
    56641 atatcatgtt gaaaatgcaa acgaagtggt caaagtcggc gacgaaattg gcgcttatgt
    56701 gactaaaatt gaagttgatg aagaaaacga aacaggcagt tacatccttt ctaaacgtaa
    56761 attagaagaa gagcagtctt atgcttattt acaagagaaa ttagagaaca acgaaacgat
    56821 tgaagcgaaa gtaactgaag tcgttaaagg tggtttagtt gtggatgtag gtcaaagagg
    56881 ttttattcct gcatcattaa tttcaactga ttacattgaa gatttctctg attatgaagg
    56941 acgtgtgctt gaactcaaag ttgaagagct tgaacctgaa aaaaatcgcg tcatcttaag
    57001 tcgtaaagcc gtagaagcag aagaaaacga aaagaaaaaa gcagaattat tacaatcgat
    57061 taaagctggc gacgtaattg aaggtaaagt tgcgcgttta actaactttg gcgcatttat
    57121 tgaccttggt ggcgttgatg gtttagtcca tgtttctgag ttatctcacg aacatgtaaa
    57181 atcaccagaa gaagttgttt ctattggcga tactgttaaa gttaaagttc gttcagttga
    57241 acaagattct gaacgtgtgt cattatcaat taaagataca ttaccaagtc catttgaaac
    57301 aattcaagag aaatatagtg aaggcgacat tgttgaaggt aaagtaatgc gcttagcttc
    57361 atttggtgca tttgttgaaa tcagcagtgg cttacaaggc cttgtgcata tttcagaaat
    57421 tagccataaa catatcggta cacctggcga agttcttgaa ccaggtcaaa ctgttcaagt
    57481 taaaatttta ggtattaatc ctgaagaaga acgtatttca ctatcaatta aagcagcaaa
    57541 tcctgacgaa gaaacggaag aagcttctga ggaaacaaca cagcactata cacaacctgc
    57601 tgatgaaaac gaaaacaacc caactttagg tgacgttttc ggtgataagt tgaaagactt
    57661 aaatttataa tctatttcga actaaggtta tttcacgtaa ccttagttct tt
//
LOCUS       DANHPA010000004        45711 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.004, whole genome shotgun sequence.
ACCESSION   DANHPA010000004 DANHPA010000000
VERSION     DANHPA010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 45711)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 45711)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..45711
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.004"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(529..1161)
                     /locus_tag="PTC28_000209"
     CDS             complement(529..1161)
                     /locus_tag="PTC28_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715533.1"
                     /translation="MNYTENVFLDFLLQSLSGLSHFLTSLYEHFNFPWLILIVIIIFR
                     KDISKLLTRVSGVDYESSAGKVSVLFSNMKQLESQMEGSEHEQIREYGEDLRNRVNID
                     PNPMLENEMTPYDYYFNLVHTPAFTCQSIAKYGYFKTIENLYNAYLFLTMDYAKDHHR
                     PSEIIANIYDTAMDIKRNSGVLFDEAFIAKYRRFIELTYMGLAESHKEKK"
     gene            complement(1388..3982)
                     /locus_tag="PTC28_000210"
     CDS             complement(1388..3982)
                     /locus_tag="PTC28_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhO family protein"
                     /protein_id="HDK5715534.1"
                     /translation="MKKQKQKSHLSRVLIVFIAACLVGCIVYVPVAFRFIHDGIIYSG
                     NGDGFKQMMPFQRFLYEHFSHLRSLYDNGFGLGGDYFTDLAYYYTTSPMMYVNFIFVG
                     LGQWLLHINPSDIAFWPGNQIFTAYLRCVITFLAAYGMFRQFKLERFYCYLGAILYAT
                     STVVYYFNFTWSFFGDILIYLPLSIWGIERFFRSRRIGLFIIAIALTLFSNFYFSYYE
                     AIILTVYLVYRMIWPHRDDQVGRWQKLYLLIPAVLCSLCIAALGFLTGVRSFLNNDRQ
                     TNDVFISPIIDFSQKYHIFTNGFYITVTFIALVALFSFKLYRHYHYKMVAIFTWILLI
                     GSFSPYFDSAFNGFSFPQRRWVYILALTTSALIALWLKYLTELTIQSFLQSLIPIAVL
                     AIATVFFSRGAMWWMLVSVIILIVVAYHIYQRRPLTGRMRGVLLMLFVVQQFVLLLNY
                     HHNNIAPYQSTIEDMKAPNYHSATLQQQIDTIKHDQSPLQRIDYMSTYAVNSSMIYDF
                     NGVALYSSIFDGNIFDYYDRQMQINMEYDSNSTYRLLGDRENLYALWGVTDRIKDAPD
                     RTMPYGMKKVQTIQDDNHAWTHSHQTIDYPSAHLTSRVYDAKDLKSPLDREQAMLQGV
                     VIRHQQANETFQANPNLLSTATVTPRDASMNGKILTVHEKDGGVNIDLPQNVKARYND
                     YYVEMDIELLSPNQPHYLKLDDFYQRRTKLNYAYRRFITPITVRVPVRDTMQLRLKQG
                     DYRFELKGIYGEDYSTLKRAASEVEPVHIEQDRRHIHAHFKSDKDQYLVLPIPYRQGL
                     HAEVNGETRPVLQGNGLMTVVPVEKGDRDVTVTYSLPYWHILSLLTVIGIMGAIVYRW
                     WLRRTIKY"
     gene            complement(3979..6588)
                     /locus_tag="PTC28_000211"
     CDS             complement(3979..6588)
                     /locus_tag="PTC28_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhO family protein"
                     /protein_id="HDK5715535.1"
                     /translation="MRRYIQPISFIVLFLCMSLIGHAYILYRFFADGLLFTGPNDGME
                     QMVPIQMFLYEKWSEGTFFYATDFGLGGDFFTDLSYYFSTNFIFILTAGITWLLSITH
                     LVDSKDMMYWFIQAWVVSILKCTGVMIGTYCYARQLKLQHVSSVVFAVLFAMSPLYFR
                     FTVYWPFFSDVFILLPLLLLSIERFLKSGQLGLFIIMTAFSFANNFYFAYYQVLMGLI
                     YYSLRMFHAHPDDQKRGMKTVLPLGVAAVLGVGSSLLFFFHGARSFFNNQRIPFEGDI
                     PFIEPFNENTNLFYDNYLIVISFVVIQALLSFKLYRHFYFRLFAILSILTIIAAFIPY
                     VDSIFNGFSAPQKRWHYLLAFVTSGLVATYVQHFKSLSRLTYSLTAIPAMAVVFISAY
                     VYDRVVWWVGLIPIVFLIGLLVLTIARHDNKPRHFVTVSFACALIILQFAISAVFIKN
                     QVFHTDHEKRANTFYAQASLYNTPLQQSLVDKMNTEKHEDERIDWRVNEQDNTPMYQH
                     FKGLSLYSSIFDRQLIEFYYRYLMINLKEESVSRYQSTGSRSNIASLLSVRYLMEKDY
                     QHQQPANFEKVHQYGQYVIYENQYPLPAVHVSHEYYNGEDLTTPIDREHAMLDGVVLD
                     HQGQTYPKKAQNLVHEVEMTTYDAQWKRSDTLTVTELNGGVTLQLPETLREQYEDFYL
                     VVYFKRNAPDSNSTLDVNGYKNHRLFNNSKYRTGQNTLLYRVQPDNNGQIHLGISPTG
                     SYQFNIQGLYGEDYDTLKRAYHNQAPHHYEAHQGKIKVQLAEHSGGVAVINIPYRKGM
                     TAIVDGHAVTPQKVNGMMTGIKIRPHAKQIVIHYRPPYFNTMVVLSIISIISSIIYSR
                     WYQHKQSRKSEKH"
     gene            complement(6608..6991)
                     /locus_tag="PTC28_000212"
     CDS             complement(6608..6991)
                     /locus_tag="PTC28_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HDK5715536.1"
                     /translation="MVNSARFFEIFRFVLVGGVNTLNYYIVYLILLRLFDVHYLISHI
                     VGFIFSFVVSFYLNCYFVYKVRPTLKKFLAFPLTQVVNMGTQTLLIFIFVDLMHFNAA
                     LAPFVGLIVTIPITYILSKFILKDR"
     gene            7219..8091
                     /gene="ylqF"
                     /locus_tag="PTC28_000213"
     CDS             7219..8091
                     /gene="ylqF"
                     /locus_tag="PTC28_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HDK5715537.1"
                     /translation="MVIQWYPGHMAKAKREVTEQLKKVDVVFELVDARIPFSSRNPMI
                     DEVIQQKPRVVIFNKKDMTNLKEMEKWYAFFREKGAYPVAVDAKHGKGLKNVEAAAIE
                     ATREKFEREKVKGLKPRAIRAMIVGIPNVGKSTLINKLANRSIAQTGNKPGVTKQQQW
                     IKVGKSLQLLDTPGILWPKFEDQLIGKKLSLTGAIKDSIVHLDEVAIYGLEFLIEHDY
                     EALLAHFKIDVPRDAEMLDWFDAIGRKRGLLQRGNEVDYEAVIETLIYDIRNAKIGTY
                     CFDLYSEWQDETDA"
     gene            8084..8869
                     /locus_tag="PTC28_000214"
     CDS             8084..8869
                     /locus_tag="PTC28_000214"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HDK5715538.1"
                     /translation="MRKGKTIQAIKAELQHLTSLEELAQHPDFQDERKGVQQAFVQRQ
                     RQLEKIALQQQKYRDMCIYETEILNVQPEALICGVDEVGRGPLAGPVVASAVILQPGH
                     DFVGINDSKQLSVTQRNLLNTSLKEQVRAWAVGVATPEEIDEHNIYVATQIAMYRAIE
                     NLSVTPTHYLIDAMTLDHLTAPQQAIIKGDAKSVSIAAASIIAKVYRDDLMAEYAKQY
                     PGYDFAQNAGYGTQKHLDGLKQYGVTPIHRKTFEPIKSMVSKF"
     gene            8961..9236
                     /locus_tag="PTC28_000215"
     CDS             8961..9236
                     /locus_tag="PTC28_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715539.1"
                     /translation="MDETLRKLYKVLVHFEEKEVEITEDEAKLKKIKEEIEENLNISI
                     EDEQQADLIRLLKEHQFVVESTEDEQKIVQVPMDDDTQISFQVNDEG"
     gene            9503..10669
                     /gene="sucC"
                     /locus_tag="PTC28_000216"
     CDS             9503..10669
                     /gene="sucC"
                     /locus_tag="PTC28_000216"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006190114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HDK5715540.1"
                     /translation="MNIHEYQGKEIFRSMGVAVPEGRVAFSAEEAVEKAKELDTDVYV
                     VKAQIHAGGRGKAGGVKIAKSLSEVEAYANELLGKVLVTHQTGPEGKEVKRLYIEEGA
                     NIQKEYYVGFVIDRATDRVTLMASEEGGTEIEEVAAKNPEKIFKETIDPVIGLAPYQA
                     RRIAFNINIPKESINKAVKFLIALYNVFIEKDCSIVEINPLVLTGEGDVLALDSKINF
                     DDNALFRHKDIVELRDLEEEDPKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDTI
                     NHFNGNPANFLDVGGGATKEKVTEAFKIILGDENVKGIFVNIFGGIMRCDIIAEGIVA
                     AVKEVELTLPLVVRLEGTNVKEGKQILKDSGLAIEPANTMAEGAQKIVKLVNEA"
     gene            10691..11596
                     /gene="sucD"
                     /locus_tag="PTC28_000217"
     CDS             10691..11596
                     /gene="sucD"
                     /locus_tag="PTC28_000217"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HDK5715541.1"
                     /translation="MSVFVDKNSKVIVQGITGSTALFHTKQMLEYGTQIVAGVTPGKG
                     GQVVEGVPVFNTVEEAKKETGGNVSVIYVPAPFAADAILECIDAELDLAICITEHIPV
                     IDMIKVKRYLEGKKTRLIGPNCPGVITSDETKIGIMPGYIHKKGHVGVVSRSGTLTYE
                     AVHQLTEEGIGQSTAVGIGGDPVNGTNFIDVLEAFNNDDDTKAVVMIGEIGGTAEEEA
                     AEWIKANMTKPVVGFIGGQTAPPGKRMGHAGAIISGGKGTAAEKIKTLNECGVKTAAT
                     PSEIGSTLIEAAKEAGIYESLLTVK"
     gene            11835..12722
                     /gene="dprA"
                     /locus_tag="PTC28_000218"
     CDS             11835..12722
                     /gene="dprA"
                     /locus_tag="PTC28_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HDK5715542.1"
                     /translation="MKQLLLLLLYAGFSTQQIQSCYPKLCTLSGNLPQRIQAFKSMLS
                     HMSQFHLQQKLIRLDMLNIHTIEATLHEHQIVPIMIDEPLYPPLLKEIYDPPLILFCK
                     GRLELLQHSTNSLGIVGARQHTAYTPQALETLFNTFQHFPLTIISGLAHGTDALAHHY
                     AIRHDLSTIGVLGFGHFHHYPKNTQALRQRMEQHHLTLSEYPPYTPIAKFRFPERNRI
                     ISGLSKGILITEAKEKSGALITLDQALEQNRNVYVLPGDMFNVHTKGNMLRVKEGAEI
                     VLCAQDILKDYANLNVNAL"
     gene            12806..14875
                     /gene="topA"
                     /locus_tag="PTC28_000219"
     CDS             12806..14875
                     /gene="topA"
                     /locus_tag="PTC28_000219"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002453083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HDK5715543.1"
                     /translation="MADNLVIVESPAKAKTIEKYLGKKYKVIASMGHVRDLPRSQMGV
                     DVEHDYEPKYITIRGKGPVVKDLKRHAKKAKKVFLASDPDREGEAIAWHLANILELED
                     SKENRVVFNEITKDAVKESFKHPRGIEMDLVDAQQARRVLDRLVGYNISPVLWKKVKK
                     GLSAGRVQSVALRLVIDRENEIRNFKPEEYWSIEGEFRYGKSKFNAKFLHYKDKPFKL
                     ATKDDVTVITKALDGNQFTVSNVTKKEKTRKPANPFTTSTLQQEAARKLNFKARKTMM
                     VAQQLYEGIDLKRKGTIGLITYMRTDSTRISKDAQNEAKQFIESEYGSAYSSKVTKKG
                     KQGDQDAHEAIRPTSTLRTPAEMKDYLTRDQYRLYKLIWERFVASQMAPAILDTVAVD
                     LTQNDVKFRANGQTIKFKGFMTLYVETDDDKGKEKENRLPKLEVGNEVLATKIDPAQH
                     FTQPPPRYTEARLVKTLEELKIGRPSTYAPTIDTIQKRNYVKNESKRFVPTELGEIVH
                     EQVKEYFPEIIDVDFTVNMETLLDKIADGDVAWKKVVGDFFNSFKQDVERAEKEMEKV
                     EIKDEPAGEDCEVCGNPMVIKMGRYGKFMACSNFPDCRNTKAITKPIGVTCPKCKKGD
                     VVERKSKKNRIFYGCSNYPECDFVTWDKPIGRDCPKCQHYLAENKKGRATQVVCSNCD
                     YKEEVQK"
     gene            14903..16207
                     /gene="trmFO"
                     /locus_tag="PTC28_000220"
     CDS             14903..16207
                     /gene="trmFO"
                     /locus_tag="PTC28_000220"
                     /EC_number="2.1.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FADH(2)-oxidizing
                     methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-
                     methyltransferase TrmFO"
                     /protein_id="HDK5715544.1"
                     /translation="MTSVNIVGAGLAGSEAAFQLAERGIHVNLYEMRPVKQTPAHHTN
                     QFAELVCSNSLRGNALTNAVGVLKEEMRRLDSLIIAAADHARVPAGGALAVDRHDFAG
                     YITEKLRNHPNVTVSNEEVTSIPEGPTIIATGPLTTEPLAKEIVALTGKDQLYFYDAA
                     APIIEKDSIDMDKVYLKSRYDKGEAAYLNCPMTKEEFDRFYEAALAAEVAPMNDFEKE
                     KYFEGCMPFEVMAGRGEKTLLFGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNIV
                     GFQTRLKWGAQKEVIRLIPGLENVDIVRYGVMHRNTFINSPEVLSEIYEFKSRKNLFF
                     AGQMTGVEGYVESAASGMIAGINLAHRMLGKADVVFPRETMLGSMAYYISHATNNKNF
                     QPMNANFGLVPPLEQRIKDKKERYETLANRALEHLDHFKQTL"
     gene            16328..17218
                     /gene="xerC"
                     /locus_tag="PTC28_000221"
     CDS             16328..17218
                     /gene="xerC"
                     /locus_tag="PTC28_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002453085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HDK5715545.1"
                     /translation="MKQIQEQFLDMLKRERFFSDHTLKAYHDDLVQFNRFLAQEQLSL
                     TAFKYIDARNYLQTLYDLGLQRTTVSRKISTLRSFYAFWMTQDHEIVNPFVQLVHPKK
                     ERYLPTFFYTEEMEALFQTVMQDAHKGLRDRVILELFYATGIRVSELVSLKTEDVDLE
                     MCWIKVLGKGGKERIVPFGEFCRQSIEQYLAEFAPIQNVQNPYLITNLKGQPITERGV
                     RYVLNDIVKRTAGVTSIHPHKLRHTFATHLLNEGADLRTVQSLLGHVNLSTTGRYTHV
                     TNQQLRNVYLQAHPRAKKGE"
     gene            17225..17767
                     /gene="hslV"
                     /locus_tag="PTC28_000222"
     CDS             17225..17767
                     /gene="hslV"
                     /locus_tag="PTC28_000222"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015365078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HDK5715546.1"
                     /translation="MSSSIHATTIYAVRHNGGAAMAGDGQVTLGEKVIMKQTAKKVRK
                     LYNGKVIAGFAGSVADAFTLFEKFEAKLQQYSGNLERAAVELAKEWRGDKQLRQLEAM
                     LIVMDKEHILVVSGTGEVIAPDDDLIAIGSGGNFALSAGRAFKRHASHLSAREMAYES
                     LKVASDICVFTNDHITVEEL"
     gene            17782..19191
                     /gene="hslU"
                     /locus_tag="PTC28_000223"
     CDS             17782..19191
                     /gene="hslU"
                     /locus_tag="PTC28_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HDK5715547.1"
                     /translation="MDRNAIKFTPKDIVDRLNEYIVGQEEAKKKVAIALRNRYRRSLL
                     DDEVKQEIAPKNILMMGPTGVGKTEIARRMAKIVGAPFLKVEATKFTEVGYVGRDVES
                     MVRDLVDVAVRLVKDQKKANVVEAATQKANDKLVKLLVPSLKKKASQNTNNPLESLFG
                     GAIPNFGQHNEEDEEEPPTEDIKTKRSEIRVQLLNGQLEEEKVKVKVEQDPGALGMLG
                     TNQNEQMQEMMNQLMPKKKVEKELPVKTARKILVDQFADEMIDHETANQEALDLAEQM
                     GIIFIDEIDKVATSNQNSGQDVSRQGVQRDILPILEGSVVKTKYGTVSTEHMLFIGAG
                     AFHVSKPSDLIPELQGRFPIRVELQDLSVDDFVRILKEPKLSLIKQYEMLLKTEEVVV
                     NFTDEAIYRLAEMAYHVNQETDNIGARRLHTILEKMLEDLSFEAPNMPHAQVDITPQY
                     VDDKLKTISTNKDLSEFIL"
     gene            19211..19984
                     /gene="codY"
                     /locus_tag="PTC28_000224"
     CDS             19211..19984
                     /gene="codY"
                     /locus_tag="PTC28_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-sensing pleiotropic transcriptional
                     regulator CodY"
                     /protein_id="HDK5715548.1"
                     /translation="MSLLSKTRELSSLLQKHKGISVDFKDVAQTISKVTVTNVFIVSR
                     RGKILGSSLNELLKNERIIKMLEDRHIPEKYTEKLMHVYETLSNISIDDELSVFPPEN
                     ESVFKDSKTTVFPIIGGGERLGTLVLGRVSDEFEDNDLILGEYAATVIGMEILREKHS
                     EIESEARDKAAISMAINSLSYSEKEAIDHIFEELGGKEGLLIASKVADRVGITRSVIV
                     NALRKLESAGVIESRSLGMKGTFIKVKKEAFLDELSRTE"
     gene            20151..20948
                     /gene="rpsB"
                     /locus_tag="PTC28_000225"
     CDS             20151..20948
                     /gene="rpsB"
                     /locus_tag="PTC28_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002448842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HDK5715549.1"
                     /translation="MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQ
                     KTVKKVEEAYNFVKQVSEEGGKVLFVGTKKQAQESVKAEAERAGHYYVNQRWLGGILT
                     NYKTISKRVQRISEIEKMEEDGTFDVLPKKEVVELKKEYDRLIKFLGGIREMKSMPQA
                     LFVVDPRKERNAIAEARKLNIPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMA
                     DAILEGQQGVSNEEVAAEQDIDLTEDETAEGESTEATENTEATVESN"
     gene            21038..21916
                     /locus_tag="PTC28_000226"
     CDS             21038..21916
                     /locus_tag="PTC28_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HDK5715550.1"
                     /translation="MAISAKLVKELRERTGAGMMDCKKALEATDGDIEKAIDYLREKG
                     IAKAAKKADRIAAEGITHVEVKGNEAVIVEINSETDFVARNEGFQQLVKEIANQILDT
                     KAATVEELNETTLPNGKKVSEHMTEAISTIGEKLSLRRFEIRTKTDNDAFGAYLHMGG
                     RIAVLSVVEGTTDEDAAKDVAMHIAAINPKYVSSEQVSEEELNHEREVLKQQALNEGK
                     PENIVEKMVEGRLRKYLQEICAVDQNFVKNPDQTVEAFLKSKGGKLVDFVRYEVGEGI
                     EKRQENFADEVKGQMK"
     gene            22068..22790
                     /locus_tag="PTC28_000227"
     CDS             22068..22790
                     /locus_tag="PTC28_000227"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000057332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HDK5715551.1"
                     /translation="MTETSKYKRVVLKLSGEALAGDKGFGINPMIIKSIAEQVAEVAK
                     MDTQIAVIVGGGNIWRGKTGSDLGMDRGTADYMGMLATVMNALALQDSLEQLDCDTRV
                     LTSIEMKQVAEPYIRRRAIRHLEKNRVVIFAAGIGNPYFSTDTTAALRAAEVEADVIL
                     MGKNNVDGVYSADPKVDPNAKKYDRLTYIQLLQEGLQVMDSTASSFCMDNNIPLKVFS
                     IMEEGNIKRAVQGEDIGTIITK"
     gene            22808..23362
                     /gene="frr"
                     /locus_tag="PTC28_000228"
     CDS             22808..23362
                     /gene="frr"
                     /locus_tag="PTC28_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HDK5715552.1"
                     /translation="MKEIIQDAKTRMKKSTENLSRELAQINAGRANSNLLAGVQVDYY
                     GAPTPVQQLASINVPEARLLVVSPYDKTSLADIEKAIIAANLGVNPTSDGDVIRIMVP
                     ALTEERRKEIVKEVKKTGENAKVSIRNIRRDANDTLKRQEKDGDISEDELRNGSDEVQ
                     KITDSSIKEIDQLVADKEKDIMSV"
     gene            23606..24367
                     /locus_tag="PTC28_000229"
     CDS             23606..24367
                     /locus_tag="PTC28_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HDK5715553.1"
                     /translation="MFKKFMKKNDTQNHIEALDLRNIPEHIAIIMDGNGRWAKQRKMP
                     RIKGHYQGMQTIKTITRAASDLGVKYLTLYAFSTENWSRPDEEVNYIMGLPVNFLNTF
                     LPELIEKNVRVETVGFIDELPEKTIQAIEEAKIKTADNTGLTLIFAINYGGRAEIVHG
                     IQTLMKEMRHASDQDIDALTEQHFQKYLMTRDYPDPELLIRTSGEQRVSNFLIWQLSY
                     SEFIFNSKMWPDFDGEELKACIKTYQSRQRRFGGL"
     gene            24382..25164
                     /locus_tag="PTC28_000230"
     CDS             24382..25164
                     /locus_tag="PTC28_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002459284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HDK5715554.1"
                     /translation="MKVRTITTIVALIVFLPILLIGGSTWMYFTFLLALIALKELLNM
                     NRIQLLSIPGLLSALALVIMMLPQDFGEWVIVLQQKSLIAMSFIILSYTVMSKNRFSF
                     MDSAFCLMSVAYVGIGFMYFYVTREAGLEFILFGLLIVWLTDTGAYIFGRLLGKRKLW
                     PTISPNKTIEGFIGGLICSLIVPLAFMFFVDFDYPMVGLLLITVVLSMFGQLGDLVES
                     GFKRHFGVKDSGRLLPGHGGILDRFDSFMFVLPLMNVFLIQM"
     gene            25181..26311
                     /locus_tag="PTC28_000231"
     CDS             25181..26311
                     /locus_tag="PTC28_000231"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016910764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HDK5715555.1"
                     /translation="MKNIAILGASGSIGQQAIDVIERHPENFNLTAFTVGKNIDFAIE
                     VIQKFNPEIVAVQEESAVAQLKPYHSHIVSGREGLIEVATYNKNDLVLNSLLGSVGLE
                     PTMKAIEVGKDIALANKETLVVAGELVMAHARQHGVNILPVDSEHAAIFQCLNGEEMR
                     KVKNVVITASGGSFRDLTRDQLASVTVEDALNHPNWSMGHKITIDSATMMNKGFEVIE
                     AKWLFDLDIDQIQTILHKESIIHSMVEFVDTSVMAQLGTPDMRMPIQYAFTYPERIEH
                     QAPSLNLAEVAQLNFKPMDFDRYRCLQYAYDALRIGGTMPVVLNAVNEVAVAKFLNRE
                     IAFLDIEKIIEREMAAHEVIQNPTLEQILELDYYYKTKEYEV"
     gene            26318..27598
                     /gene="rseP"
                     /locus_tag="PTC28_000232"
     CDS             26318..27598
                     /gene="rseP"
                     /locus_tag="PTC28_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HDK5715556.1"
                     /translation="MLITLIAFIIVFGVLVFVHEFGHMYFAKRAGIMCPEFAIGMGPK
                     IFSFRKDETLYTIRLLPVGGYVRMAGDGMEEQPVQPGMHVRIKTNDANEVTHIILDDQ
                     HKFQQIEALEVKQVDLTEDLFIEGITADDDARHRFNIAEKAFFVQNGSLIQIAPRHRQ
                     FTHKKPYQKFLTLFAGPLFNFILAFVLIIGLAYYEGVPVPKIAQVGEKSPAQQIGLQK
                     GDEIKKIGNHEIHRFNDVKKQLEATEGKPTTIVIERDGKTIEKEFSPKKVEIQTTKTT
                     KQTDYQLGFMPERERSLFEPLLFGIQQTIEYGKIIFVAVASMIASIFTGDFSFDMLNG
                     PVGIYKNVDTVVKTGIINLISWTAVLSVNLGIMNLLPIPALDGGRILFVIYEAIFRKP
                     ANKKAETVIIAAGAVFVLIIMVLVTWNDIQRYFL"
     gene            27623..29326
                     /locus_tag="PTC28_000233"
     CDS             27623..29326
                     /locus_tag="PTC28_000233"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HDK5715557.1"
                     /translation="MKQSKVFIPTLREVPAEAEAISHQLLLKAGLIKQNAAGVYSYLP
                     VATRVIHKISDIIRQEMERIDAVEVVMPVLQQSELWKESGRWDAYGMELMRLRDRNQR
                     EFALGPTHEEVVTSLVRDELRSYKQLPLTLFQIQTKFRDEKRPRFGLLRGREFIMKDA
                     YSFHTDEESLMETYQNMYNAYSTIFKRVGLNVRPVVADSGAIGGNHTHEFHALSAIGE
                     DTIVYSNNSDYAANIEKAEVTYYETVNTAEALQPLEKVETPNVKTAQELADFLGQPLE
                     NIIKTMVFKVNGAFILLLVRGHHEVNDVKIKDYFKTDDVAMATDDEIRNLLGASPGSL
                     GPVTDRDVKVYADQFVQSLRNLAIGANEDGYHYVNANVERDFQIEGYGDFRFILEGEP
                     LADGSGPAQFAEGIEVGQVFVLGEKYSEAMKATVLNQQGREQNLTMGCYGIGVSRTLS
                     AIIEQHHDDNGIIWPKSVTPFDVHLISVNPKKDEQRACADRLYDQLLGTYDVLYDDRN
                     ERAGVKFNDADLIGIPVRVVVGKNASEGIVEVKRRDTGDSEDVHVNDLVIHLEKLYEQ
                     I"
     gene            30243..34550
                     /locus_tag="PTC28_000234"
     CDS             30243..34550
                     /locus_tag="PTC28_000234"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001251777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PolC-type DNA polymerase III"
                     /protein_id="HDK5715558.1"
                     /translation="MTLQNQEKFKILLKQVNMLDHFDQDFIDQGQLTRVDVSPKSRKW
                     TFHIRLPRLLKYEDYAVFTHAMKESFQHIADVDWKITVNDVSQQDEYLLKYLGDCIEQ
                     TQLSPKVKGQLKQKRMIVSGDVVKILVQNDIEGNHFNKVCNGSLVRAMQRCGFNIQKV
                     VFETDESGHDEDLASLEAHIQEEDELSAREATAKIEKMKEQRAQQDDEVTVERCQIGK
                     PIQVENVRPIESIIEEEFKVAIEGVIFDINLKELKSGRHIVELKVTDYTDSLVLKMFT
                     RKNKNDLDHFKSLKEGQWVRAQGRIEEDMFIRDLVMMMSDIEAIKRTPKMDKAAEKRV
                     EFHLHTSMSQMDGVTHIGDYVAQAAQWGHDAIAVTDHNVVQAYPDAHAAAEKHGIKMI
                     YGMEGMLVDDGVPIAYKPSDIMLQDATYVVFDVETTGLSNQYDKIIELAAVKVKNGEI
                     IDKFERFSNPHEKLTETIKNLTHITDDMLKDAPEIEEVLTEFKAWVGDAIFVAHNASF
                     DMGFIDTGYERLGFGPSTNAVIDTLELSRTINTSYGKHGLNFLAKKYGVELTQHHRAI
                     YDTEATAYIFVKMLAQLKALDVHNHQDINKKLSNEDAYKRARPQHVTLIVQNQTGLKN
                     LFKIVSASLVQYYYRTPRIPRSLLDEHREGLLVGTACDEGEVFTAVMQRDQSEVERIA
                     KYYDYIEVQPPALYQDLLDRDLIRDNETLVEIYERILKVGETNQIPVIATGNAHYLHE
                     HDAIARRILIAAQPGNPLNRSTLPEAHFRTTDEMLDAFHFLGEERAHQIVVENTRALA
                     ERIEKVVPIKDKLYTPNMEGANEEIREMSYRHAKQLYGEELPQIVIDRLEKELESIIG
                     NGFAVIYLISQRLVKKSLEDGYLVGSRGSVGSSFVATMTEITEVNPLPPHYICPSCKK
                     SEFFDDGSVGSGFDLPDKTCECGTEMIKEGQDIPFETFLGFKGDKVPDIDLNFSGEYQ
                     PKAHNYTKVLFGEEYVYRAGTIGTVAEKTAFGFVKGYLNDQGIHKRGAEVDRLVKGCT
                     GVKRTTGQHPGGIIVVPDYMDIFDFTPIQYPADDQSSSWMTTHFDFHSIHDNVLKLDI
                     LGHDDPTMIRMLQDLSGIDPKTIPVDDQQTMRIFSSPEALGVTEEEILAKTGTFGVPE
                     FGTGFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIRSGTCTLSSCIGCRDD
                     IMVYLMYAGLEPSLAFKIMEAVRKGKGLTEEFEQVMKENNVPDWYMDSCKKIKYMFPK
                     AHAAAYVLMAVRIAYFKVHHPLYYYASYFTVRASDFDLITMVKDKDSIRQTVKDMYAR
                     YMDLGKKEKDVLTVLEIMNEMAHRGYRMQPVNLEKSQAYEFIIEGDTLIPPFVAVPGL
                     GENVAKRIVEAREEGPFLSKEDLNKKAGVSQKIIEYLDSLGSLPNMPDKAQLSIFDM"
     gene            34675..35142
                     /gene="rimP"
                     /locus_tag="PTC28_000235"
     CDS             34675..35142
                     /gene="rimP"
                     /locus_tag="PTC28_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020363146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HDK5715559.1"
                     /translation="MSKVTEQVETIIQPVLDELNFELVDVEFAKEGRDHYLRIAIDKP
                     GGVDLNDCTLASERISEVMDEQDPIPQAYYLDVSSPGAERPIKNEKGFQNAIEQPIFV
                     SLYAPIEGDKEWLGHLKSVTEDAITMEVKVKAKTKTITIPRDKIAKARHAVML"
     gene            35163..36341
                     /gene="nusA"
                     /locus_tag="PTC28_000236"
     CDS             35163..36341
                     /gene="nusA"
                     /locus_tag="PTC28_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HDK5715560.1"
                     /translation="MESNELLLATEYLEKEKKIPREVLVDAIEAALITAYKKNYDSAR
                     NVRVELNLDSGTFRVISRKEVVEEVFDHREEIDLSTALVKNPAYEIGDIYEEDVTPKD
                     FGRVGAQAAKQAVMQRLRDAEREILYEEFIDKEDDIMTGVIDRVDHRYVYVNLGRTEA
                     VLSEAERSPNETYLPNERIKVYVNKVEQTTKGPQIFVSRSHPGLLKRLFEQEVPEIFE
                     GTVEVKSVAREAGDRSKISVYSENPDIDAVGACVGAKGARVEAVVAELGGEKIDIVQW
                     SEDPKVFVRNALSPSQVIDVIVDEENQSTTVIVPDYQLSLAIGKRGQNARLAAKLTGW
                     KIDIKSETDAKALGIGEKETTTVETEPVAMTAEELDLEATTDEHIEDNASLEDESKEN
                     "
     gene            36353..36640
                     /locus_tag="PTC28_000237"
     CDS             36353..36640
                     /locus_tag="PTC28_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxR family protein"
                     /protein_id="HDK5715561.1"
                     /translation="MKKKKIPMRKCILSNEMKPKKEMIRVVKNKEGEISADVTGKMPG
                     RGAYVSKDIALIERAQQAHKLEDYFKASEESLEPVYKEIIRLIYREEIPTK"
     gene            36637..36942
                     /locus_tag="PTC28_000238"
     CDS             36637..36942
                     /locus_tag="PTC28_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxQ family RNA-binding protein"
                     /protein_id="HDK5715562.1"
                     /translation="MNEQQFLNFLGLAMRAGKVKTGESVILTEVKKRRLKLVLIASDA
                     SESTKNNIINKCNSYQTPYRIVSNRNDLGDALGKGARVNVGITDQGFAKKLMSMIDE"
     gene            36959..39097
                     /gene="infB"
                     /locus_tag="PTC28_000239"
     CDS             36959..39097
                     /gene="infB"
                     /locus_tag="PTC28_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HDK5715563.1"
                     /translation="MSKQRIYEYAKDLNIKSKDVIDELKKTGIEVSNHMQTLEDDQVK
                     ALDKVFKKNQAPKQQKEQKNTQSNHKNQKQGNNQKQGNNQKQGNNQQQKGKNNGPKQN
                     KKNNKGNKNKKQNKKNAPQQPSEPKELPSKITYTEGITVGELSDKLGVDSSEIIKKLF
                     LLGIMANINQSLDIEALELVASDYGVELEEEVVIDDNDLSIYFEDVEEDEDAIVRPAV
                     VTIMGHVDHGKTTLLDSIRNTRVTEGEAGGITQHIGAYQITNNGKKITFLDTPGHAAF
                     TTMRARGAQVTDITILVVAADDGVMPQTIEAINHAKEADVPIIVAVNKIDKPTANPDR
                     VMQELAEYNLIPEDWGGDTIFVPLSALSGEGIDDLLEMLILVSEVQELKANPNKAAVG
                     TVIEAELDKSRGPAASLLVQNGTLNVGDALVVGNTHGKVRAMVNDLGKRIKTAGPSTP
                     VEITGLSDVPQAGDRFVVFKDEKKARRIGEAREQENIIQQRQESKNVTLDNLFEQMKQ
                     GEMKDLNVIIKGDVQGSVEALAASLMKIDVEGVNVRIIHTATGAINESDVTLAHASNG
                     IIIGFNVRPDAGAKRAADAENVDMRLHRVIYNVIEEIESAMKGMLDPEFEEKVIGQAE
                     VRQTFKVSKVGTIAGSYVTEGKITRDAGVRVIRDGVVLFEGELDTLKRFKDDVKEVAQ
                     GYECGITVAKFNDIKEGDIIEAFVMVEVER"
     gene            39312..39551
                     /locus_tag="PTC28_000240"
     CDS             39312..39551
                     /locus_tag="PTC28_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715564.1"
                     /translation="MEKLLKDFFITFIIGVAGILLMYWIGYVPPNPRIFNVVDKITVT
                     HFFENRIYDNWLMIAFLFALVVTVFDVGSSKKEDK"
     gene            40296..40640
                     /gene="rbfA"
                     /locus_tag="PTC28_000241"
     CDS             40296..40640
                     /gene="rbfA"
                     /locus_tag="PTC28_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017724307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HDK5715565.1"
                     /translation="MNMRAERVGEQMKKELMDIINNKLKDPRVGFLTITDVQPTNDLS
                     LAKVYLTVLGSDKERENTFKGLEKAKGFIKSEIGQRMRLRIVPDLQFEYDESIEYGNR
                     IERLIQDLNHND"
     gene            40725..41642
                     /gene="truB"
                     /locus_tag="PTC28_000242"
     CDS             40725..41642
                     /gene="truB"
                     /locus_tag="PTC28_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HDK5715566.1"
                     /translation="MYHGILPVYKERGLTSHDVVFKLRKILKTKKVGHTGTLDPEVDG
                     VLPICIGQATKVSDYVMEMGKTYRAEVTLGFSTTTEDQTGDVLAREIVMVDQFDANQV
                     DAVLHSFKGWTTQIPPMYSSVKVNGKKLYEYARNGETVERPKRQIHISHIARISDLIF
                     ENDIVRFSIEVTCGKGTYIRTLATDIGRALHVPAHMSLLTRTMSGGFSLDQALTLALI
                     EQSHHDDTLQNQLLPLAYGLKGLPSFHVQNESDKMKIKNGQKFAKGYFNVPFEQQLVM
                     VDSDNDDVLAIYEVHPSRQDEIKPKKVFN"
     gene            41657..42628
                     /locus_tag="PTC28_000243"
     CDS             41657..42628
                     /locus_tag="PTC28_000243"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HDK5715567.1"
                     /translation="MEVIEITHPIQAEQYIQEDVAMALGFFDGLHRGHQALFDELDRV
                     AKEKDLKKAVMTFDPHPSVVLNPKQKRTTYITPLDDKIELLGEQNIDYCLVVNFSSRF
                     AEVTPDEFVQDYLVKNHARVIIAGFDFTFGKYGKGNMAMLQEYQAQFESITIGKQDLN
                     HEKISTTAIREALKTGHLAKANEQLGYRYRMKGTVVQGEKRGRTIGFPTANIEPSDDY
                     VWPTLGVYAVSMTIGSSDQIYRGVANIGVKPTFHDDLPQAVIEVNIFDFTENIYGERV
                     TIYWHHYIRPELKFDGIDPLVAQMNDDKARAKHLLAVDFGDDVSYNV"
     gene            42729..42998
                     /gene="rpsO"
                     /locus_tag="PTC28_000244"
     CDS             42729..42998
                     /gene="rpsO"
                     /locus_tag="PTC28_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HDK5715568.1"
                     /translation="MAISQERKNELIKEYRTHETDTGSPEVQIAVLTAEITALNDHLR
                     IHKKDHHSRRGLLKMVGRRRHLLNYLRDKDIQRYRELIKSLGIRR"
     gene            43157..45250
                     /gene="pnp"
                     /locus_tag="PTC28_000245"
     CDS             43157..45250
                     /gene="pnp"
                     /locus_tag="PTC28_000245"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HDK5715569.1"
                     /translation="MSQEKKVFKTEWANQPLTIETGQLAKQANGAVLVRYGDTVVLST
                     ATASKEPRDGDFFPLTVNYEEKMYAAGKIPGGFKKREGRPGDEATLTARLIDRPIRPL
                     FPDGYRHDVQIINTVLSADPNCSPEMAAMIGSSMALSVSDIPFQGPIAGVNVGYVDGE
                     YVINPNLEQREKSRLDLEVAGHKDAVNMVEAGASEITEAEMLEAILFGHEEIKRLCAF
                     QEEIIAHLQPEKREFIPEEKNQTLIDSVTQMTKDENLNGAIQTFDKQERDANLDAIKE
                     RILANFENEEDPENEALLKEVGTIINTLIKDEVRRLIADEKIRPDGRKPDEIRPLSSE
                     VGLLPRAHGSGLFTRGQTQALSVLTLGSISEYQIIDGLGEEEHKRFMHHYNFPNFSVG
                     ETGPVRAPGRREIGHGALGERALRYIIPDEKTFPYTVRIVSEVLESNGSSSQASICGS
                     TLALMDAGVPIKAPVAGIAMGLVTREESYTILTDIQGMEDALGDMDFKVAGTTEGITA
                     IQMDIKIDGLTKEVIEEALEQARKGRLAILEHMMQTIDQPRKELSAYAPKVEIMQIKP
                     EKIRDVIGPGGKQINEIIDATGVKLDIEQDGTVFIGSTEQDMINQARAWIESIVREAE
                     VGQVYDAKVKRIEKFGAFVELFPGKDALVHISQISNERINKVEDVLNMGDTLKVKVTE
                     IDKQGRVNASHKVLL"
BASE COUNT        15345 a         7657 c         9869 g        12840 t
ORIGIN      
        1 gctcacagaa gctgttgcgt gttctttttt aggagatgtt agagctcaga ataatcttat
       61 ctgggattgt tcgtttttta ataataataa atgtataagc gttggtaaga ctaaaactac
      121 cgatatttac tataaagact ttcatgtaca tctgtatgaa tgtaaaacta aaccttattt
      181 taaaacagca caattcgatt ttatgtgtaa agtttaggaa gaatacgcta aagaaggaac
      241 acaagttagt ttgtttactt ttgttttaca atatagccat catccaacat tcgacgaaga
      301 aataagaaaa attcctaatc actttgaaat aaaaacatta gagagtttaa aacagtgtca
      361 ttaatgccgc tattttagat aaaataataa ctcaagtttt tatgaatccc ctcattttgg
      421 ttttgagggg gtttttctta ttttgaatat gcgattgatt aatgtgaaaa gcggagtata
      481 atgataaagc tcgtattcct ccactttaat ctttattcca aaatccattt acttcttttc
      541 tttatgactt tctgcaagcc ccatatacgt taattcgata aaccgtctat atttcgcgat
      601 aaaggcctca tcaaataaaa cgccactatt tcttttaata tccatggctg tgtcataaat
      661 gttagctata atttcgctcg ggcggtgatg gtctttcgca taatccatcg taaggaaaag
      721 ataagcgttg tacaaatttt caatcgtttt gaagtagccg tactttgcga tcgattgaca
      781 cgtgaatgca ggtgtatgaa cgagattaaa ataataatca tatggtgtca tttcattttc
      841 taacatcggg ttcgggtcga tattcacacg attccttaaa tcttccccgt attcacgaat
      901 ttgttcatgt tcagaacctt ccatctgaga ttccaactgt ttcatatttg aaaataacac
      961 actcacttta ccggcactgc tttcataatc aacgccactc actcgcgtca gcaattttga
     1021 aatatctttc ctaaaaataa tgatgacgat taaaatgagc caaggaaaat taaaatgttc
     1081 atataaagat gttaaaaaat gagagagccc acttaaactt tgaagtaaaa aatctagaaa
     1141 aacattttca gtgtaattca aaaaatcacc gcctctattt atttgtcata tgacatcatt
     1201 ttaaccttta gacacataaa attctacaat gatacgataa aaaaattatc tttaggtgaa
     1261 ttcggaatgg gcgataggga atgtatgata aatcaaaagc gatgcctcga cttaactcaa
     1321 tagcagctaa aatttgtaaa tttgctcaat tctaacatac tgagtcgacg aagcatcgcg
     1381 cattcggtta atatttgatt gttcgacgga gccaccagcg ataaacgatg gcgcccataa
     1441 tgcctattac tgttagcaaa cttaaaatat gccaatatgg tagtgaatag gtcaccgtta
     1501 cgtcacgatc ccctttttca acaggcacaa cggtcattaa gccattacct tgaagcacag
     1561 gtcttgtctc accattgact tcggcgtgta aaccttgtct gtaaggtata ggaagtacaa
     1621 ggtattggtc tttgtctgat ttaaaatgtg cgtggatgtg tcggcgatcc tgttcgatgt
     1681 gtacgggttc aacttctgaa gcggcacgtt taagcgtact gtaatcttcg ccgtaaatgc
     1741 ctttaagctc aaaacgataa tcaccttgtt ttaacctcag ttgcatcgtg tcacgaaccg
     1801 gtacacgtac ggtaattggt gtgataaaac gacgataggc atagttgagt ttggtacgac
     1861 gttggtaaaa gtcatccagt tttaaatagt gcggttgatt cggtgataac agttcgatgt
     1921 ccatctctac ataatagtcg ttgtaccgtg cttttacatt ttgaggtaaa tcgatattca
     1981 caccaccgtc tttttcgtga acggttaaaa ttttaccatt catcgatgca tctcgaggtg
     2041 tcactgtcgc tgtagataac aagtttggat tcgcttggaa tgtttcattg gcttgttgat
     2101 gacggattac tacaccttgt aacattgctt gttcacgatc taacggtgat tttaaatctt
     2161 tggcgtcata aacacgtgag gtcagatgtg cgcttggata atcgattgtt tgatgcgaat
     2221 gggtccaagc atggttgtca tcttgaatcg tttgcacttt tttcattcca tacggcattg
     2281 tacggtcggg tgcatcttta atacggtctg tcacacccca taatgcatat aaattttcac
     2341 ggtcacctaa taaacgatac gtactgttac tgtcatattc catgttaatt tgcatttgac
     2401 ggtcatagta atcaaaaata ttgccgtcga aaatgctgga atacagtgcg accccattaa
     2461 agtcgtaaat catactagag ttcacagcgt aagtgctcat ataatcgatg cgctgtaatg
     2521 gtgattggtc atgctttatc gtatcgatct gctgttgtaa agttgcacta tgataattcg
     2581 gtgctttcat atcctctatc gttgactgat acggggcgat attgttgtga tgatagttca
     2641 gtaataaaac aaattgttgc acgacaaaaa gcattaacag gacaccgcgc atcctacctg
     2701 tcagcggacg acgttggtaa atgtgatagg ccaccacgat taaaatgatg acactgacga
     2761 gcatccacca catggctcca cgtgaaaaga atactgttgc aatcgcaagt accgcaatcg
     2821 gaatgagtga ttgtagaaat gattgtatag tcaactcggt caaatatttg agccataatg
     2881 cgattaatgc acttgttgtt aatgcaagga tatacaccca acgacgctgg gggaatgaaa
     2941 agccgttaaa tgcactgtca aaatagggtg aaaacgaacc gattaacaaa atccaagtga
     3001 aaatcgcgac cattttgtaa tgataatgac gatacagctt gaacgaaaac agtgcgacga
     3061 gtgcaataaa cgtcactgta atgtaaaaac catttgtaaa gatatggtac ttttgagaaa
     3121 agtcgataat cggtgaaata aaaacatcat tcgtttgacg atcattattt aaaaatgacc
     3181 ggacaccggt taaaaaacct aacgctgcga tacacaaact acaaaggaca gctggaatca
     3241 gtaaatacaa tttttgccag cgaccgactt gatcatcacg atgcggccaa atcatgcgat
     3301 aaactaagta cactgttaaa ataattgctt cataataact aaagtaaaag ttagaaaata
     3361 atgttaatgc aattgcgata ataaataatc cgatgcgccg acttctgaaa aagcgttcaa
     3421 ttccccaaat tgaaaggggc aagtaaatta atatatcgcc aaaaaatgac catgtaaaat
     3481 taaagtaata gaccacagta gaagtggcat aaaggatggc acctaaatag caataaaagc
     3541 gctcgagttt aaattgacga aacatgccat aagcggcaag aaatgtaatg acacatcgca
     3601 aatacgccgt gaaaatttgg ttgcctggcc aaaatgcaat gtcactcgga ttgatatgta
     3661 atagccattg cccgagacct acaaaaatga agttcacata catcatcggt gaggtcgtgt
     3721 aatagtaggc gaggtctgta aaataatcac caccgagtcc aaaaccattg tcataaagcg
     3781 agcggagatg agaaaaatgt tcatacaaaa agcgttggaa aggcatcatt tgtttaaaac
     3841 catcgccgtt tccactataa atgatgccgt catgtatgaa acgaaacgcg accggtacgt
     3901 atacgataca tccgacgagg caggccgcaa taaagacgat taaaacgcgt gataaatgac
     3961 ttttttgttt ctgttttttc aatgtttttc actctttctc gattgtttat gttgatacca
     4021 gcgactgtaa atgatgctgc tgataataga gataatggac aagacgacca tcgtgttgaa
     4081 ataaggtggc cggtagtgaa tgacaatttg tttcgcatgc ggcctaattt tgatccccgt
     4141 catcatgcca ttgacctttt gtggtgtgac agcgtgtccg tcaacgatag cggtcatacc
     4201 tttacgataa gggatattga tgaccgccac acccccagaa tgttcggcta actgaacttt
     4261 aatctttcct tgatgtgctt catagtgatg aggggcttga ttatgatatg cccgttttaa
     4321 cgtatcgtaa tcttcaccgt ataaaccttg tatattgaat tggtacgatc ctgttggtga
     4381 tataccgaga tgaatttggc cattgttgtc aggttgcaca cgatacagca aagtgttttg
     4441 acctgtacga tatttcgaat tgttaaatag gcggtgattt ttatagccat tgacatcgag
     4501 tgtgctatta ctatctggcg cattacgttt aaaatagaca acaagataaa agtcttcgta
     4561 ttgttcgcgc aatgtttctg gaagttgcag cgtcacaccg ccattcagtt cagtaactgt
     4621 taacgtatct gagcgcttcc attgggcatc ataggtggtc atttcaactt catgaacaag
     4681 attttgcgct tttttaggat atgtttgacc ttgatgatct aatacgacgc catctaacat
     4741 cgcatgttca cgatcaatag gtgtcgttaa atcttccccg ttataatatt catggctcac
     4801 atgtacagca ggtaatggat attgattttc gtatatgaca tattgcccat attgatgcac
     4861 tttttcaaaa ttcgcaggtt gctggtgctg atagtctttt tccataaggt agcgcacgga
     4921 caaaagactc gcaatgtttg agcggcttcc tgtagattga taacggctga cagattcttc
     4981 ttttaagtta atcattaaat agcgataata aaattcaatg agctgtcggt cgaaaatact
     5041 cgaatataaa cttaaccctt taaaatgttg atacatcggt gtattatcct gctcattcac
     5101 acgccaatcg atgcgttcat cttcgtgttt ttcggtattc attttgtcga ccaacgactg
     5161 ctgtaaaggt gtattgtaca aactggcctg tgcataaaac gtattggcac gtttttcatg
     5221 atctgtatgg aaaacttgat ttttaataaa cactgccgat atcgcaaatt gtaagataat
     5281 gagtgcgcat gcaaagctta ctgttacgaa atgacgaggc ttattatcat gacgtgcaat
     5341 cgttaagaca agtaatccga tgagaaatac gataggaatg agaccaaccc accagacgac
     5401 ccgatcatac acgtatgcac tgatgaaaac gacagccatt gccggtatcg cggttaagct
     5461 atatgtaagg cgtgataatg atttgaaatg ttgtacataa gtcgcaacta aaccacttgt
     5521 cacaaatgct aataagtaat gccaacgctt ttgtggtgct gaaaagccgt tgaaaatact
     5581 gtccacatac ggtataaatg ctgcgataat ggttaaaatg ctcagtatcg cgaacaatct
     5641 aaagtaaaag tgacggtaca atttgaatga gagtaacgct tgaatcacga caaatgaaat
     5701 gacgattaaa tagttgtcat aaaaaagatt cgtattttca ttgaacggtt caatgaatgg
     5761 aatgtcacct tcaaaaggga tacgttgatt gttgaaaaag ctacgtgccc catgaaagaa
     5821 aaataataaa cttgaaccga cacctaaaac agctgcaacg ccaagtggta gaacagtttt
     5881 catgcctctt ttttgatcat caggatgtgc gtgaaacatg cgcaggctat agtaaatgag
     5941 tcccatcaac acttgataat aggcgaagta aaaattgttc gcaaaagaaa acgctgtcat
     6001 gataataaat agacctaatt gacctgattt caaaaaacgt tcaatactga gcaagagtaa
     6061 tggtaataaa ataaatacat cactaaaaaa aggccagtac acggtgaatc ggaaataaag
     6121 gggtgacatg gcgaataaca ccgcaaatac gaccgatgag acgtgttgaa gttttaactg
     6181 acgtgcatag caatacgttc caatcatgac accggtacat tttaaaattg aaacaaccca
     6241 tgcttggatg aaccaataca tcatgtcttt agaatctaca agatgtgtaa tggataaaag
     6301 ccatgtgatg cctgcagtta aaataaatat gaagtttgtc gaaaaataat acgatagatc
     6361 tgtaaaaaaa tcaccgccaa gtccaaaatc ggtggcatag aaaaaggtac cttcagacca
     6421 tttttcgtat aaaaacatct gaatcggtac catttgttcc ataccgtcat tgggacccgt
     6481 aaataacaga ccgtctgcaa aaaaacgata caaaatataa gcatgcccta taagtgacat
     6541 gcataaaaat aaaacaataa agctgatggg ttgaatgtaa cgtctcataa tccgaacctc
     6601 actttgatta tcgatcttta agaataaact tagataaaat ataagtaatc ggtatcgtaa
     6661 cgatgagtcc tacaaacggt gcaagggctg cgttgaaatg catgaggtcc acaaaaataa
     6721 aaatgagtaa cgtttgtgtc cccatattga ccacttgtgt gagtggaaag gctagaaatt
     6781 tctttaacgt cggtcgtact ttatagacaa agtaacaatt taaatagaaa gaaacgacga
     6841 acgaaaaaat gaaaccgaca atatggctga tgaggtaatg gacatcaaat aaacgcaata
     6901 atattaagta tacgatataa taattcagtg tattaacacc accgactaat acaaaacgga
     6961 aaatttcaaa aaaacgtgct gagttcacca tttaatatac ctacctttat tcaacgatat
     7021 gtgattgtaa atagctattg acgataaagt tgattatact taaagtggtg tatatcaaat
     7081 tttgttatac aatacatgat gcggatgctt taattcgtca tgcaatatca tatgtttata
     7141 tctttaaaac taacaattaa tataacatat aacattaaaa aaaacgattt ggaagaataa
     7201 ttaagaggag ttaaaactat ggtgattcaa tggtatccag gtcatatggc caaagcgaaa
     7261 cgagaagtaa cggaacaact gaagaaagtg gatgtggtct ttgaattagt tgatgcacgc
     7321 attcctttta gttcaagaaa ccctatgatt gatgaggtga ttcaacaaaa accacgcgtc
     7381 gtcattttca ataaaaaaga tatgaccaat ttaaaagaaa tggaaaaatg gtatgcgttt
     7441 tttagagaaa aaggggctta tcctgtagcc gttgatgcga aacatggtaa gggcttgaaa
     7501 aatgtagaag cggctgcgat tgaagcaaca cgtgaaaagt ttgaacgtga aaaagtaaaa
     7561 gggttaaaac cgagagccat acgcgcaatg atcgtcggta tccctaacgt ggggaaatcg
     7621 actttgatta acaagttagc gaaccgttcg attgcacaaa cagggaataa accgggtgta
     7681 acgaaacaac agcaatggat taaagtgggc aaatctttac agttgttaga tacaccgggg
     7741 attttatggc caaagtttga agaccaactg attggtaaaa agctgagttt aacaggtgca
     7801 attaaagata gcatcgtcca tttagatgaa gtggcgattt acggattaga atttctcatt
     7861 gaacatgatt atgaagcatt gctcgcccat tttaaaattg atgtcccgcg agatgcagaa
     7921 atgctggatt ggtttgatgc gataggacgt aaacgtgggc tgttacaacg tggaaatgaa
     7981 gtggattatg aagcggtcat tgagacactg atttatgaca tcagaaatgc aaaaatcggg
     8041 acatattgct ttgacttata ttctgagtgg caggatgaga ccgatgcgta aaggaaaaac
     8101 aattcaagcg attaaagcag aattgcaaca cttgacgtcg ttagaggagt tagcgcaaca
     8161 tcctgatttc caagatgaac gaaaaggggt ccaacaagct tttgtgcaac gtcaacgtca
     8221 acttgaaaaa atagcgttac aacaacaaaa atatcgtgac atgtgtatat acgaaacaga
     8281 aattttaaat gtgcaaccag aggcattgat ttgtggtgta gatgaggttg gacgcgggcc
     8341 tcttgctgga cctgtcgtcg caagtgcagt cattttacag cccggacatg actttgtagg
     8401 tattaacgac tccaaacagt tgtctgtcac acaacggaat ttgttgaaca cgtcattaaa
     8461 agagcaagtg cgtgcttggg cagtgggggt tgcaacacct gaagaaattg acgaacacaa
     8521 tatttatgtg gcaacacaaa tcgcgatgta ccgtgcgatt gaaaatttgt cagtcacacc
     8581 gacacattat ttaattgatg cgatgacgct cgatcatttg actgcaccac aacaagcgat
     8641 tattaaagga gatgcgaaga gtgtgtccat cgctgcagcc agtattatcg caaaagtgta
     8701 tcgtgatgac ttgatggcag aatatgcaaa acaatatcct ggttacgatt ttgcacagaa
     8761 tgctggttat ggtacacaaa aacatttaga tggtttgaaa caatacggcg tgacacctat
     8821 tcacaggaag actttcgagc ctattaaatc aatggtttca aagttttaaa cgaaatagat
     8881 cagcatataa aaagttttca aaaagttaga attatgtttt actagtagta atttctaata
     8941 aagaaaggaa taagaaactc atggatgaaa cattacgaaa attatataaa gtgctcgtac
     9001 actttgaaga aaaagaagtt gaaattactg aagatgaagc gaagttaaag aagattaaag
     9061 aagagattga agagaatttg aatatttcga ttgaggatga acagcaggcg gatttgattc
     9121 gtttgttgaa ggagcatcag tttgtggtgg agtcaactga ggatgagcaa aagattgtgc
     9181 aagtaccgat ggatgatgat acacaaattt cgttccaggt gaatgatgag ggttagtgta
     9241 gtgtatcata ggctaggatg aggcggagtt gtttccgttt tgtcctagtt tttattttag
     9301 gaacatttta tttgcgttaa actctatgtg ctaaaaaata atttttatca tttgatatct
     9361 gctgaaacaa tgtattgtgt gtgatgcaag aggtgttagc ctttataaaa catcttgata
     9421 cgagagggaa tctgtttaca atagcgctta catttcctat aattgtactt gaacttaacc
     9481 ttaagaaaca ggaggatgga gtatgaatat ccatgagtat caaggaaaag aaatttttcg
     9541 ctcaatgggc gtagcagtac cagaagggcg tgtggctttt tctgctgaag aggccgttga
     9601 gaaagcgaaa gagttagaca cagatgtata tgttgttaaa gcgcaaatcc atgcgggggg
     9661 acgtggtaaa gctggtggtg tgaaaatcgc taagtcttta tcagaagttg aagcatatgc
     9721 aaatgagtta cttggaaaag ttctcgtgac acaccaaaca ggtcctgaag gtaaagaagt
     9781 gaagcgtctt tacattgaag aaggtgccaa tatccaaaaa gaatattatg tcggctttgt
     9841 tattgaccgt gcgacagacc gtgtgacttt aatggcgtct gaagagggtg gcactgaaat
     9901 tgaagaagtt gcagcgaaaa accctgaaaa aatcttcaaa gaaacaattg acccagtgat
     9961 tggtttagcg ccttatcaag cacgccgtat cgcgtttaac atcaatattc ctaaagaatc
    10021 aattaacaaa gcggttaagt ttttaattgc tttatataat gtgttcattg aaaaagattg
    10081 ttcaatcgtt gaaattaatc cacttgtttt aacgggtgaa ggtgatgttt tagcacttga
    10141 ctctaaaatc aactttgatg acaacgcatt attccgtcac aaagatatcg ttgaattacg
    10201 cgatttagaa gaagaagatc caaaagaaat tgaagcttct aaatacgatt tatcttatat
    10261 tgcattagac ggtaatatcg gttgtatggt gaacggtgca ggtttagcga tggcaacaat
    10321 ggatacgatt aatcacttta atggtaaccc agctaacttc cttgacgtag gtggcggtgc
    10381 aactaaagaa aaagttactg aagcgttcaa aattatttta ggcgatgaaa acgttaaagg
    10441 tattttcgtt aatatctttg gtggtattat gcgttgtgat attatcgctg aaggtattgt
    10501 agcggcagta aaagaagtgg aattaacatt gccattagtt gtacgtcttg aaggtacaaa
    10561 tgttaaagaa ggtaaacaaa tcttaaaaga ctcaggttta gcaattgaac cagcgaatac
    10621 aatggctgaa ggtgcacaaa aaattgttaa acttgtaaac gaagcgtaag gaaaggatgg
    10681 gacaactaca atgagtgtat ttgtagataa aaattcaaaa gtaatcgtac aaggtattac
    10741 agggtcaact gcccttttcc atactaagca aatgttggaa tatggtacgc aaattgttgc
    10801 aggggtaaca ccaggtaaag gtggacaagt tgttgaaggc gtacctgttt tcaatactgt
    10861 tgaagaagcg aaaaaagaaa ctggcggcaa cgtatctgtt atttacgtac cagcgccatt
    10921 tgcagctgat gcgattttag aatgtatcga cgctgaatta gacttagcaa tttgtattac
    10981 tgaacatatt cctgttattg atatgattaa ggttaaacgt tatcttgaag gtaaaaagac
    11041 gcgcttaatt ggaccaaact gcccaggtgt catcacttca gatgaaacga aaattggtat
    11101 tatgccagga tacatccaca aaaaaggcca tgtcggcgtt gtttcacgct ctggcacttt
    11161 aacatatgaa gcggtacatc aattaactga agaaggtatc ggccaatcta cagctgtagg
    11221 tatcggtggg gacccagtta acggtacaaa ctttatcgac gtgttagaag cattcaacaa
    11281 tgatgatgac acgaaagctg ttgtgatgat cggtgaaatt ggtggtacag cagaagaaga
    11341 agctgctgaa tggattaaag cgaacatgac caaacctgtt gtcggcttca tcggtggtca
    11401 aacagcacct ccaggaaaac gcatgggtca cgctggtgca atcatttcag gtggtaaagg
    11461 gacagctgca gaaaaaatca aaacattaaa tgaatgtggc gttaaaacag cagcaacacc
    11521 ttctgaaatc ggttcaactt taattgaagc cgctaaagaa gcaggtattt acgaatcatt
    11581 actgactgtt aaataattga atttcaatac aaacatcagc ggtgtgtcag gcaactgaac
    11641 tgatacaccg cgattttgaa gctattcata catgggctgt taatgtatca tcactaacag
    11701 ggcgtgtgat gatagcttga ttttgatatc cttttttatt cccctttaaa catgccgttt
    11761 atgtttggca caacttcttt tattttccgc atcatccatc acgcttattc tacatcaaga
    11821 ggtgaccact acgtatgaaa caattactac tattattact gtacgctgga ttttcaacac
    11881 aacaaatcca atcctgttac cctaaacttt gtactttatc aggaaatcta cctcagcgca
    11941 ttcaagcctt caaatcaatg ctttcacaca tgtcgcaatt ccatttacaa caaaagctca
    12001 tacgactcga tatgcttaat attcatacga ttgaagcgac gttacatgaa catcaaattg
    12061 tcccgattat gatagacgaa ccgctttatc caccactgtt aaaagaaatt tatgatcccc
    12121 cgttgatttt attttgtaaa ggacgacttg aactgcttca acattctact aatagtcttg
    12181 gcattgtagg cgcaaggcaa catacagcat acacgccaca agcgcttgaa acacttttta
    12241 acacatttca acattttcca ctaacgatta tttcagggct ggcacacggt acagacgcac
    12301 tcgcacatca ttatgcgatt cgacatgact tgtccacgat cggtgtgctc ggttttgggc
    12361 attttcatca ttatcctaaa aacacacaag cattacgcca gaggatggaa caacatcatt
    12421 tgactctaag cgaatatcca ccttacacgc ctattgctaa atttagattt cctgaacgca
    12481 atcgcattat tagtggtttg tcgaaaggaa tacttatcac tgaagcaaaa gaaaaaagtg
    12541 gcgcgctcat tacgttggat caggcattag aacaaaatcg taatgtttat gtactgccgg
    12601 gggatatgtt caacgtgcat acgaaaggta atatgctacg tgtcaaagag ggagcagaaa
    12661 ttgtattatg tgcccaggat atattgaaag attatgcaaa tttaaatgtt aacgctttgt
    12721 gaaataaata caaaagattg acaaatataa aaataaccgt ttatcattta tctttgtaaa
    12781 cagaaaaagc aagggggtaa ctactttggc agataatctt gtcattgttg aatcgcctgc
    12841 aaaagcgaaa acaatagaaa aatatttagg caaaaaatac aaagtgattg catcaatggg
    12901 tcatgtgaga gatctaccac gtagtcaaat gggcgtagat gttgaacatg actatgaacc
    12961 taaatatatt actatccgag gtaaggggcc agttgttaaa gatttgaaga gacatgcgaa
    13021 aaaagcaaaa aaagtttttc tcgcaagtga ccccgatcgt gaaggtgaag caattgcatg
    13081 gcacttggca aacattttag aactagaaga tagtaaagaa aatcgcgtgg tttttaacga
    13141 gattacgaaa gacgctgtaa aagaaagttt taaacaccca cgcggtatcg aaatggattt
    13201 agtcgatgcg caacaagctc gacgtgtatt ggaccgttta gtaggttata atatttctcc
    13261 tgtattatgg aaaaaagtaa aaaaaggttt atcagctgga cgtgtacaat ctgtagcgtt
    13321 acgtcttgtg attgaccgtg aaaatgaaat tcgtaacttt aaacctgaag aatattggtc
    13381 gattgaaggc gaatttcgtt atggaaaatc aaagtttaat gccaagtttc ttcattataa
    13441 agataaaccg ttcaagttag cgacgaaaga tgatgtgaca gtcattacga aagcgttaga
    13501 cggtaatcaa ttcacagtat ctaatgtgac gaaaaaagaa aaaacacgta aacctgccaa
    13561 cccatttaca acctccactt tgcaacaaga agcggctcgg aaattaaatt tcaaggcgcg
    13621 taaaacgatg atggtggcac aacaacttta tgaaggtatt gacttgaagc gtaaaggtac
    13681 aattgggctt attacttata tgagaacgga ttcgacccgt atttcgaaag atgcgcaaaa
    13741 tgaagcgaaa caatttatcg agtcagaata tggtagtgcg tattcatcta aagtgacgaa
    13801 aaagggtaaa caaggtgacc aagatgccca tgaagcgatt cgtccaacga gtacgttaag
    13861 aacacctgct gagatgaaag actatttaac acgtgatcaa tatcgcttgt ataaattgat
    13921 ttgggaacgc tttgtggcga gtcaaatggc acctgcaatt ttagatacgg ttgctgtcga
    13981 tttaacacaa aatgatgtga aatttagagc aaacggtcag acgattaagt ttaaaggttt
    14041 tatgacactg tatgttgaaa cagatgatga caaaggtaaa gaaaaagaaa atcgtttgcc
    14101 aaagcttgaa gtcggtaatg aagtgttggc gactaaaatt gatccggcac aacactttac
    14161 acaaccgcca ccacgctata cagaagcacg tctcgttaaa acattagagg aacttaaaat
    14221 cggtcgtcct tcaacatatg cgccaacgat tgatacgatt cagaagcgta attacgtgaa
    14281 gaatgaaagt aaacgtttcg tcccaactga attgggagag atcgtgcatg aacaagtgaa
    14341 agagtacttc cctgagatta ttgatgtcga tttcactgtg aacatggaaa cgttactcga
    14401 taaaattgcg gatggcgatg tggcatggaa aaaagtggtg ggtgactttt tcaatagctt
    14461 taaacaagac gttgaacgcg cggaaaaaga aatggaaaag gttgaaatta aagacgagcc
    14521 cgcaggcgaa gattgtgaag tgtgtggcaa tccaatggtc attaaaatgg gacgctacgg
    14581 taagttcatg gcatgttcta atttccctga ttgtcgtaat acgaaagcga ttacgaagcc
    14641 gattggtgtg acatgtccga aatgtaaaaa gggcgatgtc gttgaacgta aatctaagaa
    14701 aaaccgtatt ttctatggtt gttcaaatta tccagagtgc gattttgtta cttgggataa
    14761 accgattggc cgtgattgtc cgaaatgtca acattacttg gcagagaata aaaaaggacg
    14821 tgcgacacaa gttgtatgtt cgaattgtga ctataaagaa gaagttcaaa aataatatgt
    14881 gtattaaagt gaggtaaaaa ccatgacatc tgttaatatt gtcggcgctg gtttagcagg
    14941 gtctgaagca gcatttcaat tggcggaacg tggcattcac gtgaaccttt atgaaatgcg
    15001 accagtgaaa caaacaccgg cgcatcatac gaatcaattt gctgaactcg tatgttccaa
    15061 ttcattaaga gggaacgcgc ttacgaatgc tgtcggtgta ttaaaagaag aaatgcgccg
    15121 tttagattca ttgattattg cagcagcgga tcatgcccgt gtacctgcgg gtggtgcgtt
    15181 agctgtagat cgccatgact ttgcaggata tatcactgaa aagctaagaa atcatccgaa
    15241 tgtgactgtg agtaatgaag aggtgacgtc tatccctgaa ggtccaacga ttatcgcgac
    15301 cggtccatta acgacagaac cacttgcgaa agaaatcgtt gcattaacag gcaaagacca
    15361 actgtatttc tatgacgcag ctgcaccgat tattgaaaaa gactctatcg atatggataa
    15421 agtgtatttg aaatcacgtt acgataaagg tgaagccgct tatttaaact gtccaatgac
    15481 taaagaggag tttgaccgtt tttatgaagc cgcgctcgca gctgaagtcg caccgatgaa
    15541 tgatttcgaa aaagaaaagt attttgaagg ttgtatgccg tttgaagtga tggcaggcag
    15601 aggtgaaaaa acgttactgt tcggaccgat gaagccagtc ggattagaag acccaaaaac
    15661 tggaaaacgt ccttatgctg tcgttcaatt aagacaagat gatgctgcag ggactttgta
    15721 caacattgta ggtttccaaa cgcgtttgaa atggggcgca caaaaagaag tgattcgtct
    15781 tattccagga cttgaaaacg tcgatattgt aagatatggc gtgatgcacc gtaacacatt
    15841 tatcaactct ccagaagtgt tgagtgagat ttatgaattt aaaagtcgca aaaacttatt
    15901 ctttgcaggt caaatgacag gcgtggaagg ttacgtggaa agtgctgcaa gtggtatgat
    15961 tgcgggaatt aacttagcgc atcgtatgtt aggtaaagca gatgtcgtct tccctcgtga
    16021 aacaatgctc ggtagtatgg cgtattacat ttcacatgca acgaacaata aaaatttcca
    16081 accgatgaat gcgaactttg gtctcgtacc gccgcttgaa caacgtatta aagataaaaa
    16141 agagcgttat gaaactttag caaatcgtgc attagaacat ttagatcact ttaaacagac
    16201 gttgtaatga aactgtaatt aatggcaaaa taagcaaaat tttgataaat ataaaaattc
    16261 aatgtataat caatgcagtt cccctcatca ttatgctaca atgctaatga tggaggggtt
    16321 ttttgaattg aaacaaatcc aagagcaatt tttagatatg ttaaaaaggg aacgtttttt
    16381 ctcagaccac acgttgaagg cttatcatga tgatctcgtc caatttaatc gatttcttgc
    16441 acaagaacaa ttatcgctca cggcattcaa atatatagat gcaagaaatt atttacagac
    16501 gctttatgat ttgggacttc aacggactac agtatctcga aaaatatcta cattacggag
    16561 tttttatgca ttttggatga cgcaagacca cgagatagtg aatccatttg ttcagttggt
    16621 ccacccgaaa aaagaacgat atttgccaac gtttttttat actgaagaga tggaagcctt
    16681 gtttcaaacg gtcatgcaag acgcacacaa aggattgaga gacagagtga ttttagagtt
    16741 gttttatgca acaggaattc gtgtttctga attagtgtct ttaaaaacag aagacgttga
    16801 ccttgaaatg tgttggatta aagtgttggg taaaggtggc aaagaacgta tcgtaccttt
    16861 tggagaattt tgtagacaaa gtatcgaaca gtatttggcg gagtttgcac cgattcaaaa
    16921 tgtacagaac ccatatttaa ttacgaattt aaaaggtcag ccgattacag aacgaggtgt
    16981 gcgttatgtg ttaaatgata ttgtcaaacg tacagcaggt gtcacatcga tacatccaca
    17041 taaactgcga catacatttg cgacacattt gttgaatgaa ggggcagacc ttagaactgt
    17101 tcaaagtcta cttggacatg ttaatttatc aacaacagga cgttacaccc atgtgacgaa
    17161 tcaacaatta agaaatgttt atttacaggc acatccacgt gcgaaaaaag gagagtaatc
    17221 atacatgagt tcatcaatac atgcaacaac gatatatgca gtgagacata atggtggcgc
    17281 agcgatggca ggtgatggcc aagtcacttt aggtgaaaaa gtgattatga aacaaactgc
    17341 caaaaaagta agaaagctat ataatggcaa ggtcattgca ggttttgctg gtagcgtggc
    17401 agatgctttt acactttttg aaaaattcga agccaaatta caacaatata gcggtaatct
    17461 tgaaagagca gctgtagaac ttgcgaaaga gtggcgtggc gacaaacaat tacgtcaact
    17521 ggaagcgatg ctcattgtga tggataaaga acatatcctc gtcgtgagcg ggacaggcga
    17581 agtcattgcg ccggatgatg atttgattgc aatcggttca ggtggcaatt ttgcgttaag
    17641 tgccggtcgc gcgtttaaaa gacatgcatc acacttaagc gcacgtgaaa tggcatatga
    17701 aagcttgaaa gtagcctcag acatatgtgt attcacgaat gaccatatca cagtggaaga
    17761 actttaatgg aggtatcgag catggatcgt aatgcgatta aatttacacc caaagatatt
    17821 gtagatcgat taaatgaata tattgtaggt caagaagaag ctaagaagaa agttgccatt
    17881 gcattgagaa atagatatcg tcgtagtttg cttgatgatg aagtgaaaca agaaattgca
    17941 cctaaaaata ttttgatgat ggggccgaca ggtgtaggga aaactgaaat tgcacgccgt
    18001 atggccaaaa ttgtcggtgc accgttttta aaagtagaag caacgaaatt tactgaggtg
    18061 gggtacgtcg gtcgcgatgt tgaaagtatg gtccgagacc tagttgacgt tgctgttcgt
    18121 ttagttaaag atcagaaaaa agcaaatgtt gttgaagcag cgacacaaaa agcgaatgat
    18181 aaattagtga aattgcttgt gccgagttta aagaaaaaag caagtcaaaa taccaacaat
    18241 ccattagaat ctttatttgg tggcgccatc ccgaactttg gacagcacaa cgaagaagat
    18301 gaggaagaac caccaacaga agatattaaa acaaagcgct ctgaaattcg tgtacagtta
    18361 ctgaacggac agcttgaaga agagaaagtt aaagtgaaag tagagcaaga cccgggcgct
    18421 ctaggtatgc tcggcacgaa ccaaaatgag cagatgcaag aaatgatgaa tcaactgatg
    18481 ccgaagaaaa aagttgaaaa agaattgccg gtgaaaacag cacgtaaaat tttagttgac
    18541 caatttgctg atgagatgat tgatcacgaa acagcgaacc aagaagcact tgatttagca
    18601 gagcaaatgg gtatcatttt tattgatgaa attgataaag ttgcaacgtc gaatcaaaat
    18661 agtggtcaag atgtttcgag acaaggggta cagcgtgaca tcctgcctat ccttgagggt
    18721 agcgtagtta agacgaaata tggtactgtt agtacggaac acatgctttt tattggcgct
    18781 ggagcttttc atgtatcgaa accaagtgat ttaattccgg agctacaagg acgttttcca
    18841 attcgcgtag aattacaaga tttatcagta gatgattttg tacgtattct taaagaaccg
    18901 aaattgtcct taattaagca atatgaaatg ttattgaaaa cagaagaggt tgttgtgaac
    18961 tttacagatg aagccattta tcgactggcg gaaatggcat atcatgtcaa ccaagaaacg
    19021 gacaatatcg gtgcgcgtcg tctgcatacg atattagaaa aaatgttaga agacttgtct
    19081 ttcgaagcac ccaatatgcc gcatgcacaa gtggacatca caccacaata tgttgatgat
    19141 aaattaaaaa cgatttcgac aaacaaagat ttaagcgaat ttattttata agaaaaaaag
    19201 gagtaatgac atgagcttat tatcgaaaac aagagaattg agtagtttgt tacaaaaaca
    19261 taagggcatc tcagtagatt tcaaagatgt tgcacaaaca attagtaaag tgactgtaac
    19321 taatgtgttc attgtttctc gtcgcggtaa aatattaggt tctagtttaa atgaattact
    19381 taagaacgaa cgtattatta aaatgttgga agaccgacat atccctgaaa aatataccga
    19441 aaagttaatg catgtttatg aaacgttatc taacatttca attgatgatg aattatctgt
    19501 attcccacca gaaaatgaat cagtatttaa agattcaaaa acaactgtat tcccaattat
    19561 tggtggtggc gaacgtctag gtacactcgt tttaggacgc gtgtctgacg agtttgaaga
    19621 taatgacctc atacttggtg agtatgctgc aacagtaatc ggtatggaaa tattgcgtga
    19681 aaaacattca gaaattgaat ctgaagcgcg tgataaagca gcaatttcta tggcgattaa
    19741 ctcattatct tattcagaaa aagaagcaat tgatcatatt tttgaagaac ttggtggtaa
    19801 agaaggttta ctgattgctt ctaaagtagc tgaccgcgta ggtattacac gttcagtgat
    19861 cgttaacgca ttaagaaaat tagaaagtgc gggcgtgatt gagtctcgtt cactcggtat
    19921 gaaagggaca ttcattaaag ttaaaaaaga agcattttta gacgagttat ctcgcacaga
    19981 ataaatggct tgacttgttg caatttgtca catcttgtga tatattaata tgcggctgaa
    20041 aaagtcaaaa cacacacgtg catcaaagta taagagggtg cgataaggtt atttatcgtt
    20101 tttatacgag tggacgtggc ggatgtaaac caataggagg aatttatatt atggcagtaa
    20161 tctcaatgaa acaattatta gaagctggtg ttcacttcgg tcaccaaaca cgccgttgga
    20221 acccaaaaat gaaaaagtac attttcactg aaagaaatgg catctatatc atcgacttac
    20281 aaaagacagt gaaaaaagtt gaagaagctt acaactttgt taaacaagtt tctgaagaag
    20341 gcggtaaagt tttattcgta ggtacgaaaa aacaagcgca agaatcagtg aaggctgaag
    20401 cagaacgtgc tggccactac tatgtcaacc aaagatggtt aggcggaatc ttaacaaact
    20461 acaaaacaat ttctaaacgt gttcaacgta tttctgaaat tgaaaaaatg gaagaagacg
    20521 gtactttcga tgtacttcct aaaaaagaag ttgtagaact taaaaaagaa tatgaccgtt
    20581 taattaaatt cttaggcggt attcgtgaaa tgaaatcaat gccacaagca ttattcgtag
    20641 ttgacccacg taaagagcgt aatgcaattg cagaagcgcg taaattaaac attcctatcg
    20701 taggtattgt tgatacaaac tgtgatccag atgaaattga ctacgttatc ccagcgaacg
    20761 atgacgcaat ccgtgcggtt aaattattaa ctggtaaaat ggcggacgca atcttagaag
    20821 gtcaacaagg tgtatcaaac gaagaagtgg ctgctgaaca agacatcgac ttaacagaag
    20881 atgaaacagc agaaggcgaa tcaactgaag cgacagaaaa cactgaagca actgttgaat
    20941 ctaactaaga cgcatcttga aatgggtgat aagataaata tgcttatcac ctttttttaa
    21001 aataaattaa gcatttttta aattggagga attatgaatg gcaatttcag ctaaacttgt
    21061 taaagaatta cgcgaaagaa ctggcgcggg tatgatggac tgtaaaaaag ctttagaagc
    21121 aacagatgga gatatcgaaa aagcgattga ctaccttcgt gaaaaaggta ttgccaaagc
    21181 agctaaaaaa gctgaccgta ttgcagctga aggtatcaca catgttgaag tgaaaggtaa
    21241 tgaagcagtt atcgttgaaa tcaactctga aacggacttc gttgctcgta acgaaggttt
    21301 ccaacagctt gtaaaagaaa ttgctaacca aattcttgat acaaaagcag caactgtaga
    21361 agaattaaat gaaacaacat taccaaatgg taaaaaagtt tctgaacata tgactgaagc
    21421 aatttcaaca atcggtgaaa aattaagctt acgtcgtttc gaaatcagaa ctaaaactga
    21481 taacgatgca ttcggtgctt atttacacat gggtggtcgt attgcagtac tttctgttgt
    21541 tgaaggtaca actgatgaag acgcagcgaa agacgttgca atgcacatcg cagcaatcaa
    21601 ccctaaatat gtatcttctg agcaagtaag cgaagaagaa cttaaccacg aaagagaagt
    21661 tttaaaacaa caagctttaa atgaaggtaa accagaaaac atcgttgaaa aaatggttga
    21721 aggccgttta cgtaaatatt tacaagaaat ttgtgcagtt gatcaaaact tcgttaaaaa
    21781 ccctgatcaa acagttgaag cattccttaa atctaaaggt ggcaaacttg ttgacttcgt
    21841 acgttacgaa gtaggtgaag gcattgaaaa acgccaagaa aactttgctg atgaagttaa
    21901 aggacaaatg aaataattaa cacggttttg tataagaaag aagacacctt tcgtgtcctc
    21961 cttagcatga cttcaatgca tgattgaagc cgtgtacaag gaagatacct attgtgtctt
    22021 ctttacttgt attgttttac atattacgaa tagagaggtt aaaaataatg actgaaactt
    22081 ccaaatataa gcgagtagtt ttgaaattaa gcggagaagc actagcagga gataaaggtt
    22141 ttggtattaa tccaatgatt attaagagta tcgcagaaca ggtggcagaa gtagctaaaa
    22201 tggacactca aattgctgta atcgtaggcg gtggtaacat ttggcgtggg aaaacaggta
    22261 gcgatttagg tatggatcgt ggtacagctg actatatggg gatgttagca actgtcatga
    22321 atgcattagc tttacaagat agtcttgagc aattggattg cgacacacgt gtattaactt
    22381 caatcgaaat gaaacaagtt gccgagccgt acattcgtcg tcgtgcaatt cgtcacttag
    22441 agaaaaaccg tgtcgttatt tttgcagctg gtattggaaa cccttatttc tcaacagaca
    22501 caactgcagc attacgtgca gccgaagtgg aagcagatgt gattttaatg ggtaaaaaca
    22561 atgtggacgg cgtttattca gcagatccta aagttgaccc aaatgctaaa aagtatgatc
    22621 gcttgactta tatccaacta ttacaagaag gtttacaagt aatggattca acagcctctt
    22681 cattctgtat ggacaacaat ataccgttaa aagtcttctc tattatggaa gaaggcaata
    22741 ttaaacgtgc tgttcaaggt gaagatatcg gtacaatcat tacaaaataa tatagaggtg
    22801 cgaaacaatg aaagaaatta ttcaagatgc aaaaacgcgt atgaaaaagt caactgagaa
    22861 tttatctcgt gaattagctc aaatcaatgc gggccgtgcg aactcaaact tactagcagg
    22921 tgttcaagtc gattactatg gtgcgcctac gcctgtacaa caacttgcaa gtattaacgt
    22981 tcccgaagca cgtttactcg ttgtatctcc atatgacaaa acgtctttgg ctgacattga
    23041 aaaagcaatc atcgcagcaa atttaggggt taacccaacg agtgatggtg atgtcattcg
    23101 tattatggta cctgctttaa ctgaagaacg tcgtaaagag attgttaaag aagtgaaaaa
    23161 aacgggtgaa aacgcgaaag tttctatccg taacattcgt cgtgatgcga acgatacgtt
    23221 aaaaagacaa gaaaaagatg gcgatatttc tgaagatgag ttacgtaacg gatctgacga
    23281 agtgcaaaaa attactgata gttcaatcaa agaaatcgat cagttagtgg cagacaaaga
    23341 aaaagatatc atgtcagtct aaatcgcgct gtcattcacc ttatcatgtt ggcttaatct
    23401 atgtaaggtg tgtgaactca gtccaattta ataggaagac tgtagaaaaa gtttgtctac
    23461 ttttaagctg taccgaatac gactttggta cagttttttt ctttgtttat tcaatgcggg
    23521 tattgagtgt gataaaatgg tagataattg tacgcttatg agattataat attttaagag
    23581 acgaaatagg ctcggaggaa cacgcatgtt taagaaattt atgaaaaaaa atgacactca
    23641 aaaccatatc gaagcgctcg atctacgtaa tatacctgaa cacattgcaa ttattatgga
    23701 tggcaacggg cgttgggcga aacagcgtaa aatgccaaga attaaagggc attatcaagg
    23761 catgcaaacg atcaaaacaa ttacgcgtgc ggcaagtgat ttaggggtta agtatttgac
    23821 cctttatgct ttttcaacgg agaattggtc gcgaccggat gaagaagtca actacatcat
    23881 gggcttacct gttaattttt taaatacgtt tttgccagaa ttgattgaga aaaatgtgag
    23941 agtcgaaacg gttggcttta ttgatgaatt gccagaaaaa acgattcagg cgattgaaga
    24001 agcgaaaatt aaaacagctg acaatacggg attgacttta atatttgcga ttaattacgg
    24061 tggtcgtgcg gagattgttc atggtattca aacattgatg aaagagatgc gtcatgcgtc
    24121 tgatcaagat atcgatgcgt taacagaaca acattttcaa aagtatctca tgactcgtga
    24181 ttatcctgat ccagaattat tgattcgtac atctggggaa caacgcgtta gtaatttcct
    24241 gatttggcaa ttgtcgtaca gtgaatttat ttttaattct aaaatgtggc cagattttga
    24301 tggggaagag ttaaaagcat gtattaaaac atatcaatca cgacaaagaa gatttggagg
    24361 attgtagata ggagtagtgg gatgaaggtt agaacaatca caacgatagt ggcactcatt
    24421 gtttttttac ctattttgct cattggtgga tcaacatgga tgtattttac atttttactt
    24481 gcattaattg cgttaaaaga acttttaaac atgaatagaa tccaattatt gtcaatacct
    24541 ggtcttttga gtgcattggc attagtcatt atgatgctcc cgcaagattt tggggagtgg
    24601 gttatcgttt tgcaacaaaa atcactgatt gcgatgagtt ttattatttt aagttataca
    24661 gtgatgtcaa aaaatagatt tagctttatg gactctgcct tttgtttgat gtctgtcgca
    24721 tacgtaggta ttggttttat gtatttttat gtaacgcgag aagcagggtt agaatttatc
    24781 ttattcggat tactgattgt atggttgaca gatactgggg catacatatt tggacgcctt
    24841 ttaggaaaac gtaaattatg gccaacgatt agcccgaaca aaacgattga aggatttatc
    24901 ggtgggttaa tttgtagttt aattgtgcca ctggcattta tgtttttcgt tgattttgat
    24961 tatccaatgg taggactctt actcatcacc gtcgtattga gtatgttcgg acaattgggc
    25021 gatttagtag aatcagggtt caaacgtcat tttggtgtaa aagattcagg acgtttacta
    25081 ccaggacatg gtgggatttt agaccgcttt gacagcttta tgttcgtatt acctttaatg
    25141 aatgttttct taattcaaat gtaaagagaa gtgagaaatg atgaaaaata tcgctatttt
    25201 aggtgcgtca ggctcaattg gtcaacaggc tattgatgtc attgaacgtc atcctgaaaa
    25261 ctttaattta actgcattca ctgtaggaaa aaacattgat tttgcaattg aagtgataca
    25321 aaaatttaat cctgagattg ttgctgtaca ggaagaaagc gcagttgcac aattaaaacc
    25381 ttatcacagt catattgtca gtggtcgtga agggttaatt gaagttgcga cttacaataa
    25441 aaatgattta gtgttaaatt cattgctagg tagcgtaggg cttgaaccga cgatgaaagc
    25501 aattgaagta gggaaagata tcgcattagc caacaaagaa acgttagtcg ttgcaggtga
    25561 attagtgatg gcacatgcgc gtcaacatgg ggtcaatatt ttaccagtag actcagaaca
    25621 tgctgcgatt tttcaatgtt taaatggcga agagatgcgc aaagtgaaaa acgtggtcat
    25681 tacggcaagt ggtggttcat tccgtgactt gacacgtgat caattggctt cagttacggt
    25741 ggaagatgcc ttaaatcacc cgaactggtc tatgggtcat aaaattacga ttgattctgc
    25801 aacgatgatg aataaaggct tcgaagtgat tgaagcgaaa tggctgtttg acttagatat
    25861 tgatcaaatt caaaccattt tgcataaaga aagtatcatt cattcaatgg tcgaatttgt
    25921 tgatacgagt gtgatggcac aattaggtac gccagatatg cgcatgccga ttcagtacgc
    25981 tttcacatac cctgaacgta tagagcatca agcgccatca ttaaaccttg cagaagtagc
    26041 gcaattgaat tttaaaccta tggactttga tcgttatcgc tgtttacaat atgcgtatga
    26101 tgcactgcgt atcggtggta cgatgccggt cgtattaaat gctgttaatg aagtagcagt
    26161 ggctaagttt ttaaaccgag aaattgcctt tttagatatt gaaaaaataa tcgaacgtga
    26221 aatggccgca catgaggtca ttcaaaatcc aactctggaa caaattttag aattagatta
    26281 ttactataaa acaaaagaat atgaggtgta agaaactgtg ctcataaccc ttattgcatt
    26341 tattattgtc tttggtgtac tcgtatttgt acatgaattt ggtcatatgt atttcgcgaa
    26401 acgtgcgggc attatgtgtc ctgagtttgc gattggtatg ggtccaaaga tttttagttt
    26461 tcgaaaagat gaaacacttt atactattcg tttgttgccg gtaggtggct acgtgcgtat
    26521 ggcgggagac gggatggaag agcaacctgt tcaacctggt atgcatgtga gaatcaaaac
    26581 aaatgacgcg aatgaagtga cgcacatcat tttagatgat caacataaat ttcaacagat
    26641 cgaagcgcta gaagtgaaac aagtcgattt aactgaggac ttatttattg aaggtataac
    26701 ggctgatgat gatgcacgtc atcgttttaa cattgctgaa aaagcattct tcgtacaaaa
    26761 tgggagtttg atccaaattg caccacgaca tcgtcagttt acgcataaaa agccgtatca
    26821 aaagttttta acactttttg ctggtccatt attcaacttt attttagctt ttgtgttaat
    26881 tatcggtttg gcgtattatg aaggtgtccc tgtgcctaaa attgcgcaag ttggagaaaa
    26941 atcaccagcg caacaaattg gcttgcaaaa aggtgatgaa attaaaaaaa tcggtaatca
    27001 tgagatccat cgttttaatg atgtgaaaaa gcaacttgaa gcaacagaag gcaagccgac
    27061 aaccatcgtc attgaacgtg acggtaaaac gattgaaaaa gaattctcac cgaaaaaagt
    27121 agaaattcaa acgacaaaaa caactaaaca aacagattat cagctgggtt ttatgcctga
    27181 aagagagcgt tcgctgtttg aaccgcttct attcggtatc caacagacga tagaatacgg
    27241 taaaattatt ttcgttgctg tagccagtat gattgcgagt atttttacag gtgactttag
    27301 ttttgatatg ttaaatggtc cagtcggtat ttacaaaaat gtcgatacgg tagttaaaac
    27361 gggaattatt aacttaatca gttggacggc cgtattaagt gtgaatttgg gaattatgaa
    27421 tttattaccg attcctgcac tggatggtgg gcgtatttta ttcgtgattt acgaagcgat
    27481 atttagaaaa cctgccaata aaaaagcaga aacagttatt attgcagcag gtgcggtttt
    27541 tgtattaatc atcatggtgc tcgtcacttg gaatgatata caacgttatt tcttatgata
    27601 ggacaaggag gaacaatcta ggatgaagca atcaaaagtt tttattccaa cattgagaga
    27661 agtacctgct gaagctgagg caataagcca tcaattgtta ttaaaagcag ggttaattaa
    27721 acaaaatgct gcgggggtat acagttattt gccagtagca acacgtgtca tccataaaat
    27781 ttcagatatt atccgtcaag aaatggaacg tattgacgca gtagaagttg tgatgccggt
    27841 attgcaacaa tctgaactat ggaaggaatc aggacgttgg gatgcttacg gtatggaatt
    27901 gatgcgttta cgtgatcgca accaacgtga atttgcatta gggccaacac atgaagaagt
    27961 cgtaacatca ctcgtacgcg acgaattacg ttcatacaaa cagcttccat taacgttgtt
    28021 ccaaattcaa acaaaattcc gtgatgaaaa gcgtccacgt ttcggtttat tacgtggtcg
    28081 tgaattcatt atgaaagatg cgtattcttt tcacactgat gaagaatcac tcatggaaac
    28141 gtatcaaaat atgtacaacg catacagcac aattttcaaa cgcgttggct taaatgtgcg
    28201 cccagttgta gcagattcag gtgcgattgg tggaaatcat acacatgaat tccatgcatt
    28261 aagtgccatt ggtgaagata cgattgtata tagcaataac agtgattatg ctgcgaacat
    28321 tgaaaaagct gaagtgacat attatgaaac ggtaaacact gctgaggcat tacaaccgtt
    28381 agaaaaagta gagacaccta atgttaaaac ggcgcaagag cttgcagact ttttaggcca
    28441 accgttagaa aatatcatta agacgatggt ctttaaagtg aatggcgcgt ttattttatt
    28501 actcgttcgt ggtcatcatg aagtgaatga cgttaaaatt aaggattact ttaaaacaga
    28561 tgatgtcgct atggcaacgg atgatgaaat tcgtaattta ttaggtgcat caccaggttc
    28621 attaggccct gtgacagatc gagatgtcaa agtatatgca gaccaattcg tgcaatcatt
    28681 acgcaactta gcgattggtg caaatgaaga tggttaccat tacgtgaatg caaatgttga
    28741 gcgtgatttc caaattgaag gttatggcga tttccgtttc attcttgaag gcgagccatt
    28801 ggcagatggt tctggcccag cgcaatttgc ggaaggtatc gaagtgggtc aagtgttcgt
    28861 actcggtgaa aaatattctg aagcgatgaa agcgacggtg ttaaatcaac aagggcgtga
    28921 acaaaactta acgatgggtt gttatggcat tggtgtctca agaacattga gtgcgattat
    28981 tgaacaacac catgatgata acggtattat ttggccgaaa tcagtgacgc catttgatgt
    29041 ccatttaatt tcagtgaatc ctaaaaaaga cgaacaacgt gcatgtgcag atcgattgta
    29101 tgatcaatta ttaggtactt atgatgtatt gtatgatgac cgaaatgagc gtgcaggtgt
    29161 gaaatttaac gatgcagact taataggtat tccagttcgt gtcgttgtcg gtaaaaatgc
    29221 atcagaaggt atcgtagaag tgaagcgtcg tgatactggc gacagtgaag atgtgcatgt
    29281 gaacgattta gtgatacacc ttgaaaaatt atacgaacaa atttagtagc tatcatgact
    29341 gaatttgtta taatacgatt aatcgttgaa caatgtgaag tatgatggat gaacatttga
    29401 tattttgttt ttattggttg ttcacttggg ctcgcattcc taggcgcctc acttccacta
    29461 accaacgctt gtatgaatta ttatattctt gaagcgttgg tggattttca gtttcggctc
    29521 tatgcctcag gagtctcgcc cagattcata atacaatcag tccagatgaa tcatcatcgt
    29581 ttgctgtttc aataaaattt gaaatatcat ggttgtcaat gtatttcaca attttaactg
    29641 atatcatttg aggaatagca aagttaacgc cttggacagt tcttacaaac atagaaagtg
    29701 ttattgaaat tcaaaagtgg atagggtgaa gtgatgcatt gttgataacg cgaatagccc
    29761 tagtgcagtg taaggcttaa attgatttta gaggctggga cattcagttt gtccagcctt
    29821 ttctattgtt ttcatgtaca tgtgtaaaat taaaatgcac aatcaaatta ttattaatgg
    29881 aaaccaaatt tttgatactc aattgagctt aattccaact ttttgatttc attgattagt
    29941 ggtacttggt atcaaattgc taaaatggat gagactctcg agggatcagc tgaaccggaa
    30001 aatccaccaa cgcttcaaca atgtaatagt tcaattaagt gttggttagt tggaggtttc
    30061 agtccctggg aaagcgaatc catggcggca attgtaatca atatagcaat catatcaaaa
    30121 tagataagtt tagcaattaa aagaacagca aatctaaaaa tgaaccaatc gtattcatga
    30181 aaattgttca acattaatga atccaacgca tacacggcaa ttcaaataag gtggttagaa
    30241 aattgacatt acagaatcaa gaaaaattta agattcttct taaacaagtg aatatgttag
    30301 accattttga tcaagacttc attgatcaag gccaattgac acgtgtagat gtatccccaa
    30361 aatcacgaaa atggacgttt catattcggt tgccacgatt gttaaaatat gaagattatg
    30421 cagtctttac ccatgcgatg aaagaaagct tccaacatat tgcagatgta gattggaaaa
    30481 ttacggtcaa tgatgtgtca caacaagatg aatatttact gaaatattta ggtgattgta
    30541 tagaacaaac acaattgtcg cctaaagtga aagggcaact aaaacaaaaa cgtatgattg
    30601 tctcaggtga tgttgttaaa attctcgtcc aaaatgatat tgaggggaac catttcaata
    30661 aagtttgcaa cggcagctta gtgcgcgcga tgcaacgatg tggttttaat attcaaaaag
    30721 ttgtatttga aacagatgaa agtggtcacg acgaagattt agcatcatta gaagctcata
    30781 ttcaagagga agatgaacta agtgcacgcg aagcaactgc taaaattgaa aaaatgaaag
    30841 aacaacgtgc acaacaagat gatgaagtga ccgtcgaacg ttgtcaaatt ggtaagccga
    30901 ttcaagttga aaatgttcga ccgattgaat cgattattga agaagagttt aaggtggcaa
    30961 ttgaaggtgt cattttcgac attaatttaa aagagttgaa aagtggccgt cacatcgttg
    31021 aattaaaggt gacagactat acggattcac tcgtacttaa aatgtttaca cgtaaaaaca
    31081 aaaacgactt agaccatttc aaatcattaa aagaaggtca atgggtgcgt gcacaaggtc
    31141 gtattgaaga agatatgttc attcgcgacc tcgtgatgat gatgtctgac attgaagcga
    31201 ttaaacgcac accaaaaatg gataaagctg cggaaaagcg tgtagaattc catttgcata
    31261 catcaatgag tcaaatggat ggtgtgacgc atattggtga ttatgtcgca caagctgcac
    31321 aatggggaca tgatgcgatt gcagtaacgg atcataacgt cgtacaagct tatcctgatg
    31381 cacatgctgc agctgaaaag catggtatta aaatgattta tggaatggaa ggcatgctcg
    31441 ttgatgatgg tgtgccgatt gcgtataaac cgtcggatat tatgctccaa gatgcgacat
    31501 atgttgtatt tgacgtcgag actaccggat tatccaatca gtacgataaa atcatcgagt
    31561 tggccgccgt gaaagtgaaa aatggtgaaa ttattgataa gttcgaacga tttagtaatc
    31621 cgcatgaaaa gttaactgaa acgattaaaa acttgacgca tattacagat gatatgttaa
    31681 aagatgcgcc tgaaattgaa gaagtgctta ctgaatttaa agcatgggta ggcgatgcga
    31741 ttttcgttgc acataatgca tcgttcgata tgggctttat cgataccggt tatgaacgtc
    31801 tcgggtttgg tccttcgaca aatgcggtta ttgatacact tgagttgtca cgtacgatta
    31861 acacaagtta tggcaaacac ggcttgaact ttttagcaaa aaaatatggc gtggagctca
    31921 cacaacatca ccgtgcgatt tatgatacgg aagcaacagc ttatattttc gtgaagatgt
    31981 tggcgcaatt aaaagcgtta gatgtgcaca accaccaaga tatcaacaaa aaattatcga
    32041 atgaagatgc ttataaacgt gcacgcccgc aacacgtcac attaattgtg caaaatcaaa
    32101 ccggtcttaa aaacttgttt aaaattgtca gtgcgtctct cgtgcaatat tattaccgta
    32161 caccacgtat tccacggtca ttactagatg aacatcgtga aggcttgtta gtcggtaccg
    32221 catgcgatga aggtgaagta tttactgccg tcatgcagcg agatcaatct gaagttgaac
    32281 ggattgcgaa atattatgat tatattgaag tgcaaccgcc tgctttgtac caagatttac
    32341 tagatcgtga cttgattcgt gataatgaaa cgcttgtcga aatttatgaa cgtattttaa
    32401 aagtgggaga aacgaatcaa attccagtaa ttgcgacagg caatgcccac tatttacatg
    32461 aacatgatgc gattgcacgt cgtattttaa ttgccgctca acctggtaac ccgttgaacc
    32521 gttcgacgtt accagaagca cattttagaa cgacggatga aatgttagat gcttttcatt
    32581 tcttaggtga agaacgtgcg caccaaatcg tcgttgaaaa tacgcgtgcg ttggcagagc
    32641 gcattgaaaa ggtcgttcca attaaagata aactgtatac gcccaatatg gaaggcgcaa
    32701 atgaagaaat tcgtgaaatg agttatcgtc atgcgaaaca gttgtacggt gaagaattac
    32761 cacagattgt gattgaccgt ctagagaaag agctagaaag tattatcggt aacggatttg
    32821 cggttattta tttaatttcg caaagactcg ttaaaaagtc attagaagat ggctatttag
    32881 taggttctcg tggttcggtc gggtcaagct ttgttgcgac aatgacggaa attacagaag
    32941 tgaacccact gccaccgcat tacatttgtc caagttgtaa aaagagtgag tttttcgatg
    33001 atggttcagt cggttcaggc tttgacttac ctgataaaac gtgtgaatgt ggcacagaga
    33061 tgatcaaaga aggacaagat attccgttcg aaacgttctt aggctttaaa ggggataaag
    33121 tccccgatat cgacctgaac tttagtggtg aatatcaacc gaaagcacat aactatacaa
    33181 aagtcttgtt cggtgaagaa tatgtttatc gtgccggaac aattggtact gtcgctgaaa
    33241 aaacggcatt tggtttcgtg aaagggtatt taaatgatca aggcattcat aaacgtggtg
    33301 ctgaagtgga tcgtctcgtg aaaggttgca caggtgttaa acgtacaact ggtcagcacc
    33361 caggtgggat tatcgtcgtt ccagattata tggacatttt tgactttaca ccgattcaat
    33421 atccagcaga cgatcaaagt tcaagttgga tgacgacgca ctttgacttc cattcgattc
    33481 atgataacgt tctgaaactt gatattctcg ggcacgatga tccaacgatg attcggatgt
    33541 tgcaagactt gtcaggtatc gatccaaaaa cgattcctgt tgacgatcaa caaacgatgc
    33601 ggattttcag ttctccagaa gcgcttggtg taacagaaga ggaaatttta gcgaaaaccg
    33661 gaacgttcgg tgtgccagaa tttgggacag gtttcgtacg tcaaatgtta gaagacacga
    33721 aaccgacgac attttcagag cttgtacaaa tttcaggact gtcacatggt accgatgtat
    33781 ggttgggtaa tgcacaagaa ctgattcgta gtggaacttg tacgttatcg agctgtatcg
    33841 gttgtcgtga cgatattatg gtgtacttaa tgtacgctgg tttagaaccg tcactcgcct
    33901 ttaaaattat ggaagcagta cgtaaaggta aaggcttaac agaggaattt gaacaagtga
    33961 tgaaagaaaa taacgtgcca gattggtata tggattcatg taagaaaatt aaatacatgt
    34021 tcccgaaagc gcacgcagca gcttatgtgc taatggctgt acgtatcgct tatttcaaag
    34081 tgcatcatcc actttattat tatgcaagtt actttactgt ccgtgcgtca gactttgatt
    34141 taattacgat ggtgaaagac aaagacagta ttcgtcaaac tgtaaaagat atgtatgcac
    34201 gttacatgga tttaggtaaa aaagaaaaag atgtattgac cgtgctagaa attatgaatg
    34261 aaatggcgca tcgtggttac cggatgcaac ctgtcaactt agagaaaagt caggcatatg
    34321 agttcattat tgaaggtgat acattaattc cgccattcgt tgctgtgccg ggtcttggtg
    34381 aaaacgtagc gaaacgtatt gttgaagcgc gtgaagaagg accgttctta tcgaaagaag
    34441 atttgaacaa aaaagctggt gtgtcacaaa aaatcattga atacctcgat agtttaggct
    34501 cattaccgaa tatgcctgac aaagcacagt tgtccatctt tgatatgtag agataaattt
    34561 gtcggaagat gcaatctatg gtataatgat gttgcttata aaattagact caagtgggaa
    34621 gagtgggtgt tacccgctct tttctatttg tttgtcagtc ataagggggc tcgtatgagt
    34681 aaagttacag agcaagttga aaccataata caacctgtcc ttgacgaatt gaactttgaa
    34741 ttagtagacg ttgagtttgc taaagaaggt cgcgatcatt atttgcgtat cgccattgat
    34801 aaaccgggtg gcgtcgattt gaatgattgt acactcgcat cagaacgcat tagtgaagtg
    34861 atggatgaac aagatccgat tccacaagcg tattatttag acgtgtcatc accaggtgca
    34921 gaacgtccaa ttaaaaatga aaaaggcttt caaaatgcga ttgaacaacc gatctttgta
    34981 tcgttatatg caccgattga aggtgacaaa gaatggttag gtcatttgaa atcagtcact
    35041 gaagatgcca ttactatgga agtgaaagtc aaagcaaaga cgaaaaccat cacgattcca
    35101 cgtgataaaa tcgctaaagc acgtcacgca gttatgcttt aaagacgtaa ggaggaaaat
    35161 gagtggaaag taacgaatta ttattagcaa cggaatattt agaaaaagag aaaaaaattc
    35221 ctagagaagt tttagttgat gcaattgaag cagctttaat tacggcatat aagaaaaact
    35281 acgacagcgc acgtaatgtc cgtgttgaat taaatttaga cagcgggaca ttccgagtga
    35341 tttctcgtaa agaggttgtc gaagaagtgt ttgatcaccg tgaagaaatt gatttatcga
    35401 cagcattagt aaagaaccca gcgtacgaaa ttggggatat ttatgaagaa gatgtgacac
    35461 cgaaagactt tggtcgtgtc ggtgcacaag cagctaaaca agctgtcatg caacgtttac
    35521 gtgatgcaga acgtgaaatt ttatacgaag agttcatcga taaagaagat gacattatga
    35581 caggtgtgat cgaccgtgtg gaccatcgtt atgtttatgt gaatttagga cgtacagaag
    35641 cagtattatc tgaagcagaa cgtagcccga atgaaacgta tcttccaaat gaacgcatca
    35701 aagtgtatgt gaataaagtg gaacaaacga caaaagggcc tcaaattttt gtatcacgta
    35761 gccatccagg tttattaaaa cgcctttttg aacaagaagt gcctgaaatt tttgaaggta
    35821 ctgtggaagt gaaatctgtt gcgcgtgaag cgggagaccg ttcgaaaatt agtgtgtact
    35881 cagaaaatcc agatattgat gcagttggcg catgtgtggg tgcgaaaggt gcacgtgtag
    35941 aagcggttgt ggctgaatta ggtggcgaaa aaatcgatat cgttcaatgg agtgaagatc
    36001 cgaaagtatt cgtacgtaat gcattgagcc cgtcacaagt gattgatgtg attgtagacg
    36061 aagaaaatca atcgacgact gtaatcgttc cagattatca actgtcatta gcaatcggca
    36121 aacgtggtca aaacgcacgt cttgctgcaa aattaacagg ttggaaaatc gatattaaat
    36181 cagaaacaga tgcaaaagcg ttaggtatcg gtgaaaaaga aacaacaact gttgaaactg
    36241 aacctgtagc gatgacagct gaagagctgg atttagaagc aacgacggat gaacacattg
    36301 aagacaatgc aagcttagag gatgaaagta aagagaatta ggagggattt ttatgaaaaa
    36361 gaaaaaaatt cctatgcgaa aatgtatttt atctaatgag atgaaaccta aaaaagagat
    36421 gattcgtgtt gtcaaaaata aagaaggcga aatttcagct gacgtaacag gaaagatgcc
    36481 gggacgcggg gcttacgttt caaaagacat cgctttaatt gaaagggcac aacaggcgca
    36541 caaattagag gattatttta aagcgtcaga agaatcactt gaacctgttt acaaagaaat
    36601 tatacgtctg atctatagag aagagattcc gacaaaatga atgaacaaca atttttaaac
    36661 tttttaggtt tggcgatgcg tgcgggaaaa gtgaagacag gcgaatctgt catccttact
    36721 gaagtgaaaa agcgtcgttt aaaacttgtg ctcatcgcaa gtgacgcgtc tgagagtacg
    36781 aaaaataata tcatcaataa atgtaacagt tatcaaacac cttatcgcat tgttagtaac
    36841 cgtaacgatt taggagatgc attaggtaaa ggtgcacgcg tcaatgtcgg tattactgat
    36901 caagggtttg caaaaaagtt gatgtcaatg atagatgaat aatgttagga gtggtttaat
    36961 gagtaaacaa agaatttatg agtatgccaa agatttaaat attaaaagta aagatgtaat
    37021 tgatgagtta aagaaaacgg gaatcgaagt gtccaaccac atgcaaactt tagaagatga
    37081 ccaagtgaaa gcgttggata aagtattcaa aaaaaaccaa gctccgaaac aacaaaaaga
    37141 gcaaaaaaat actcaatcaa atcacaaaaa ccaaaaacaa ggtaacaacc aaaaacaagg
    37201 taacaaccaa aagcaaggca acaatcagca acaaaagggt aaaaataacg gccctaaaca
    37261 aaacaagaaa aacaacaaag gcaataaaaa caaaaagcaa aacaagaaaa atgcaccaca
    37321 acaaccaagt gaacctaaag aactgccatc aaaaatcact tacactgaag gtattacagt
    37381 gggtgaatta tcagacaaac tcggcgtaga ttcatcagaa attattaaaa agttattctt
    37441 gcttggcatt atggcgaaca tcaaccaatc tttagatatt gaagcacttg aattagttgc
    37501 atctgattac ggtgttgagc ttgaagaaga agtggttatt gatgataacg acttgtcaat
    37561 ttattttgaa gacgttgaag aagatgaaga cgcgatcgta cgtccagcag ttgtgactat
    37621 catgggacac gttgaccatg gtaaaacgac attgcttgac tcaattcgta atacacgtgt
    37681 tactgaagga gaagcaggcg gtatcacaca acatatcggt gcttaccaaa ttacgaacaa
    37741 tggcaaaaaa atcacgttct tagatacgcc aggacacgcc gcttttacaa caatgcgtgc
    37801 gcgtggtgct caagtgacgg acattaccat tttagttgtc gctgctgatg atggtgtgat
    37861 gcctcaaaca attgaagcaa tcaaccatgc gaaagaagca gatgtgccaa ttatcgttgc
    37921 agtcaacaaa attgataaac caacagcgaa ccctgaccgt gtgatgcaag aactagcgga
    37981 atacaatctc atccctgaag actggggtgg cgatacgatt ttcgtaccac tatcagcgtt
    38041 aagtggtgaa ggtattgacg atttacttga aatgcttatc ttagtttctg aagtacaaga
    38101 attaaaagcg aacccgaata aagcagcagt cggtacagtt atcgaagctg agttagacaa
    38161 atcacgcggt cctgccgctt cattacttgt ccaaaatggt acattaaacg tcggcgatgc
    38221 acttgtagtc ggtaacacac atggtaaagt ccgtgcgatg gtgaatgacc tcggtaaacg
    38281 tattaaaact gcaggtccat caacaccagt tgaaatcact ggtttaagcg acgtacctca
    38341 agcaggtgac cgcttcgtcg tattcaaaga cgagaaaaaa gcacgtcgta ttggtgaggc
    38401 acgtgaacaa gaaaatatta tccaacaacg tcaagaaagc aaaaacgtaa cattggataa
    38461 cttattcgaa caaatgaaac aaggtgaaat gaaagacttg aatgtcatca tcaaaggtga
    38521 cgtacaaggt tcagtggaag cattagccgc ctcattaatg aagattgatg ttgaaggcgt
    38581 aaacgtgcgt attattcata cagcaacagg tgccatcaac gaatctgacg tgacattagc
    38641 acatgcctca aacggtatca ttatcggctt taacgtccgt ccagatgccg gtgccaaacg
    38701 tgcagcagac gctgaaaatg tcgatatgcg tttacaccgt gtcatttata acgtgattga
    38761 agaaatcgaa tccgcaatga aaggcatgct tgatcctgaa tttgaagaaa aagtcatcgg
    38821 tcaagcagaa gtacgtcaaa cattcaaagt atcgaaagtc ggtacaatcg ccggtagtta
    38881 tgtcactgaa ggtaaaatca cacgtgacgc aggtgtccgt gttatccgtg atggtgtcgt
    38941 attatttgaa ggcgaattag atacattgaa acgtttcaaa gacgatgtga aagaagttgc
    39001 acaaggttac gaatgtggta ttacagtagc gaaattcaat gatattaaag aaggcgatat
    39061 tattgaagca tttgtcatgg tagaagtaga aagataatga actgaatgaa acctccttga
    39121 gtctatgatg ggttgaagga ggttttgtta tgtaaaaaat ggcgcatgaa ttttaaattg
    39181 tttttcattc acttgcttat tgttgttact ttagcgttta tatgcacctt ttaaaagtgg
    39241 caaaaaacta aaactttatt cctttaaatt ttaaactttt gtataataaa gacaaacaaa
    39301 ggaggacgtt tatggaaaag ttattaaaag attttttcat cacttttatc atcggtgtgg
    39361 ctggcatatt attaatgtac tggatcggtt acgtgccacc gaatccgcga atattcaatg
    39421 ttgtagataa gattactgta acgcatttct ttgagaatcg catttatgac aattggctca
    39481 tgattgcatt tttatttgcc cttgttgtca ctgtgtttga tgtagggagt tcaaagaaag
    39541 aggataagta aataaagcgt caggatccgt taatgacttt acatatgcag aatgagttag
    39601 aaggtatagt catacgtctg ttatgatagt acgttgcaaa actgacaaag attcgagact
    39661 tggatattaa gtgatccgag tcttttaatg gttattgtat atataaaatt acactgtggc
    39721 cctcaatata ctttcaaaat aaatgcaatg cgcgtataat acatctataa aaacatagga
    39781 gcctatgagt catatgtttt cacctacagc ttgctaaatt tgtaatagca gggggtgata
    39841 catatggtga cgataattat acacttagat atatctatct gtttaagtat cattgtctat
    39901 tttttggtaa gatatcatca taaaaagaca aaaaacaacc cccgttaccg caattaacga
    39961 ggatacccta ataataggct gtaatagtaa aacatatgtt gagctcgaac tcacttatat
    40021 gttgctatgt ttttagctcc taatctactc tcataaagac ggttaggagt ttttttcttt
    40081 ttttaatcat agcatgtgcg tgaaataaat acaagcacca cgcaggtaga attacaattg
    40141 acaacaatca aaaataattt caaccacgtc ttttgaaaat aaatgaaaac caatcatctt
    40201 ttctactctg tttcattgac gcctcttccc actctccttt ataatgattt attgaggata
    40261 acgctacgat attttatcga aaggaggcac tttttatgaa tatgcgtgca gaacgtgttg
    40321 gcgaacaaat gaaaaaagaa ttaatggata ttattaataa taaattaaaa gatccaagag
    40381 tcggttttct aacgattaca gatgtacagc caacaaacga tttatcatta gcaaaggttt
    40441 atttaacagt acttggtagt gataaagaac gcgaaaatac attcaaaggt cttgaaaagg
    40501 caaaagggtt cattaaatct gaaattggtc agcgtatgcg acttagaatt gtccctgatt
    40561 tgcaatttga atatgatgaa tcgattgaat atggcaaccg tattgaacga ttgattcaag
    40621 atttaaatca taatgactaa caatgtgcgc tagagtgcgt gagatgatct gcaattgtgg
    40681 agtccacgta gtctagctta ttttatgaaa aggagtgttg gtggatgtat catggtattt
    40741 taccggtcta taaagaacga gggttgacaa gtcacgatgt cgtttttaaa ttgcgcaaaa
    40801 ttttaaagac gaaaaaagtc ggccataccg ggacattaga tcctgaagta gatggcgtcc
    40861 ttcctatttg tatcggtcaa gcgacaaaag tgagcgatta tgtgatggaa atgggaaaaa
    40921 cgtatcgcgc tgaagtgaca ttaggttttt caacgacgac agaggatcaa acgggtgacg
    40981 tcttggcacg tgaaatcgtt atggttgacc aattcgatgc caatcaagtt gatgcagtgt
    41041 tacactcatt taaagggtgg acgacacaaa ttccaccaat gtattcgtct gtgaaagtaa
    41101 atggcaaaaa attgtatgaa tacgcacgca atggtgaaac ggtagagcgc cctaaacgtc
    41161 aaattcatat ttcgcatatt gcacggattt cggacttaat ttttgaaaat gacatcgtac
    41221 gtttttcaat agaagtgact tgtggcaaag ggacatatat tcgaacactc gcaacggata
    41281 ttggtcgcgc actccatgta ccagcgcata tgtcattgtt gacacggacg atgagtggtg
    41341 gcttcagttt agaccaagca ctcactttag cattgattga acagtcgcat catgacgaca
    41401 cactccaaaa tcaattatta ccacttgcat acggcttgaa aggacttcca tctttccatg
    41461 ttcaaaatga aagtgataaa atgaagataa agaatggaca aaagtttgct aaaggttatt
    41521 ttaatgtgcc atttgagcag caacttgtca tggttgatag tgacaatgat gatgtattag
    41581 caatttatga agtgcatcca tcacgacaag atgaaattaa accgaaaaag gtatttaatt
    41641 aaaaggagac ttggttatgg aagttattga gattacacat cctattcaag ctgaacaata
    41701 tattcaagag gatgtagcaa tggcgcttgg ctttttcgat gggctacaca gagggcatca
    41761 agcattattt gatgaattag atcgtgtggc aaaggaaaag gatctgaaga aagcggtcat
    41821 gacttttgat ccacatccgt cagtcgtttt aaatcctaaa caaaaacgca cgacttatat
    41881 tacgccgtta gatgataaaa ttgaattatt aggcgaacaa aatattgatt attgtcttgt
    41941 tgtgaatttt tcttcacgat ttgcggaagt gacacctgat gaatttgttc aagactattt
    42001 agtgaaaaat catgctcgtg ttattattgc tggatttgat tttacatttg gtaaatatgg
    42061 caaagggaat atggcgatgc ttcaagaata tcaagcgcaa tttgaaagta ttacaattgg
    42121 taagcaagat ttgaaccatg aaaaaatttc aacgacagcg attcgtgaag cattgaaaac
    42181 gggtcatctt gcgaaggcga atgagcaatt aggttaccgt tatcgaatga aaggaaccgt
    42241 cgtgcaaggt gaaaagcgcg gccgtacgat tggtttccca acagcgaata ttgaaccaag
    42301 tgatgactat gtttggccaa cgctcggtgt ttatgcggtc agtatgacga ttggttcaag
    42361 tgatcaaatt taccgtggtg ttgctaacat tggtgtgaag ccgacgttcc acgatgattt
    42421 acctcaagct gtcattgaag tgaatatttt tgattttacg gaaaacattt atggcgaacg
    42481 tgttacgatt tattggcacc actacatccg accagagttg aaattcgatg ggattgaccc
    42541 actcgttgcg caaatgaacg atgacaaagc acgtgccaaa catttattag cggttgattt
    42601 tggtgacgat gtatcatata atgtataagt ctaataaaga ttagcacacg acctttatct
    42661 tggtaggttg aaactccgac gcctgactca gataaaggca cgaaaaattt aaaggaggaa
    42721 attgataaat ggcaatttca caagaacgta aaaacgaatt aatcaaagaa taccgtacac
    42781 acgaaacaga cactggttca ccagaagttc aaatcgctgt gttaactgca gaaatcactg
    42841 cattaaacga tcacttacgt attcacaaaa aagaccacca ttcacgtcgt ggtttattaa
    42901 aaatggtagg acgtcgtcgt cacttattaa actacttacg tgacaaagac atccaacgtt
    42961 accgtgaatt aatcaagtca ttaggtatcc gtcgttaatt ttaatcattg cgcacgtgct
    43021 agtggcatta caggaaggag ctgggacatt tatcgtatcc ggctcctttt ttaactatta
    43081 aaagatgttt atgtaagata taattgaaat gtaaaaggct acgaaatgtt taaagaggta
    43141 ggagaggaga tttataatgt ctcaagaaaa gaaggttttt aagacggaat gggcaaacca
    43201 gccgttaaca atagaaacag gacaactcgc aaaacaagcg aatggtgctg tactcgtacg
    43261 ctacggggac acagttgttt tgtctacagc gacagcatca aaagaaccac gcgatggcga
    43321 ctttttccca ttaactgtca attatgagga aaaaatgtat gccgcgggta aaattccagg
    43381 tggcttcaaa aagcgtgaag gacgtccagg tgacgaagcg acattgactg cacgtttaat
    43441 cgaccgtcct atccgtccat tattcccaga tggctatcgt catgatgtcc aaatcattaa
    43501 tactgtattg agtgcggatc ctaactgttc acctgaaatg gcagcgatga tcggatcgtc
    43561 aatggcgtta agtgtatcag atattccatt ccaaggccca attgcgggtg tgaatgtagg
    43621 ctatgttgat ggcgaatatg tcattaaccc gaatttagaa caacgcgaaa agtcacgtct
    43681 tgatctagaa gtagccggtc ataaagacgc ggtgaacatg gttgaagcgg gtgcgagtga
    43741 aattactgaa gcagaaatgt tagaagcaat tttatttggc catgaagaaa tcaaacgttt
    43801 atgtgcattc caagaagaaa ttattgcgca tttacaacct gaaaaacgtg aatttattcc
    43861 tgaagagaaa aatcaaacgc tcatcgattc agtgacgcaa atgacaaaag atgagaattt
    43921 aaatggtgcg attcaaacgt tcgacaaaca agagcgtgac gcgaatcttg atgcaattaa
    43981 agaacgtatt ttagcgaact ttgaaaacga agaagatcct gaaaatgaag cattattaaa
    44041 agaagttggc acaattatta atactttaat taaagatgaa gtacgccgtt taattgcaga
    44101 tgaaaaaatt cgtccagacg gtcgtaaacc tgacgaaatc cgtccattat catcagaagt
    44161 gggcttatta ccacgtgcac atggttcagg gttatttaca cgtggacaaa cacaagcatt
    44221 gtcagtgtta acgttaggct ctatttctga atatcaaatt atcgatggtt taggtgaaga
    44281 agagcacaaa cgttttatgc accactacaa cttcccgaac ttctcggtag gtgagacagg
    44341 tccagtacgt gcaccagggc gtcgtgaaat tggtcatggt gcgttaggtg aacgtgcatt
    44401 aagatatatt attccagatg agaagacgtt cccttataca gtgcgtatcg taagtgaagt
    44461 gttagagtct aacggttctt catcacaagc gtctatctgt ggttcaactt tagcgttaat
    44521 ggacgcgggt gtgccgatta aagcaccagt tgcagggatt gcgatgggtc ttgttacgcg
    44581 cgaagaaagc tacacgattt taacggatat tcaaggtatg gaagacgcac tgggtgatat
    44641 ggacttcaaa gttgcaggta cgactgaagg gattactgcg attcaaatgg acattaaaat
    44701 cgacggctta acgaaagagg tcattgaaga agcgttagaa caagcgcgta aaggtcgttt
    44761 agccatttta gagcatatga tgcaaacgat tgaccaacca agaaaagaat taagtgctta
    44821 tgcgcctaaa gtagaaatca tgcaaattaa acctgaaaaa atccgtgatg tcatcggacc
    44881 aggtggtaaa caaatcaacg aaattattga tgcgacgggt gttaaacttg atatcgaaca
    44941 agatggtaca gttttcatcg gttcaactga gcaagacatg atcaatcaag cacgtgcatg
    45001 gattgaaagt atcgtgcgtg aagcagaagt cggtcaagtg tatgatgcaa aagtaaagcg
    45061 cattgaaaaa ttcggtgcgt ttgtggaact gttcccaggt aaagatgcat tagttcatat
    45121 ttcacaaatt tcgaacgaac gcattaacaa agtggaagat gtattgaaca tgggtgatac
    45181 actgaaagtg aaagtgactg agattgacaa acaaggtcgt gtgaacgctt ctcataaagt
    45241 gttgctttaa aattaacaaa gcatgacatt taaatagatg aacttaaaaa acagaagtag
    45301 atgtgacata tgagcattga cttctgtttt ttgcatagtg agagacaatt ctaaggagtg
    45361 cggtatattt gaggaaaata aacattttgt caggtataat cattcttgta ctattactcg
    45421 gtgggatttt gctgaatttt ttacaccact ctgaactgat tgtggtgatg tataacctga
    45481 ttgcctttgt cattatgatg ttactttttt taaatgcatc tcggaattga ggattgttta
    45541 gaaatagtta ccaatgctta agactaatta taatacgctg atacatattt tttaatgtag
    45601 gaggatcatt tgtaaagcaa catcaatcat ttattgtgta tacaaaatcc tcaacctgtc
    45661 gtccgagaaa cactttaata gtgtacagag tttccattat ccactataat a
//
LOCUS       DANHPA010000005        44681 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.005, whole genome shotgun sequence.
ACCESSION   DANHPA010000005 DANHPA010000000
VERSION     DANHPA010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 44681)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 44681)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..44681
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.005"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..166)
                     /locus_tag="PTC28_000246"
     CDS             complement(<1..166)
                     /locus_tag="PTC28_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001569336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3578 domain-containing protein"
                     /protein_id="HDK5715570.1"
                     /translation="MIDNFMQVLKLIKEKRTNNVVKKSDWDKGDLYKTLVHDKLPKQL
                     KVHIKEDKYSV"
     gene            complement(488..967)
                     /gene="rlmH"
                     /locus_tag="PTC28_000247"
     CDS             complement(488..967)
                     /gene="rlmH"
                     /locus_tag="PTC28_000247"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020363758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HDK5715571.1"
                     /translation="MKITILAVGKLKEKYWKLAIAEYTKRLGAYSKIEVVEVPDEKAP
                     ETMSAKEIEQVKEKEGQRILSKIKPQSTVITLEIAGKMLSSEDLAQTLDQRMTQGASD
                     FTFVIGGSHGLHEAVLRRSDFALSFSKMTFPHQMMRVILLEQVYRAFKIMRGEAYHK"
     gene            complement(1679..2461)
                     /locus_tag="PTC28_000248"
     CDS             complement(1679..2461)
                     /locus_tag="PTC28_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDK5715572.1"
                     /translation="MSVLASGSTGNATYVESDKGSLLVDVGLTGKKMEALFEQIDRKI
                     SDLSGILVTHEHSDHIKGLGVLARKYGLPVYANEKTWTCIDKKDSKIPLDQKFVFNPH
                     ETKSIAGFDIESFNVSHDAIDPQFYIFHNNYKKFTMITDTGYVSERMKGMIRGSDAFM
                     FESNHDVDMLRMCRYPWKTKQRILSDMGHVSNEDAAHAMKDVITGQTKRIYLSHLSQD
                     NNMKDLARMSVSQILQAHDIDTVNEVKLCDTDKAIPTPIYTL"
     gene            complement(2484..3263)
                     /locus_tag="PTC28_000249"
     CDS             complement(2484..3263)
                     /locus_tag="PTC28_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system regulatory protein YycI"
                     /protein_id="HDK5715573.1"
                     /translation="MNWKRAKSLFIVVFLLVNICLIFVYNDKISKSKISDAEQQNSVN
                     FEQENIKLPKNMPDVSHVKMQLITARSKDFKDEAEKSGKAEARNNGHTLDKEMSESVN
                     VKLDPISHLKPYIDQNIYKGNEYQYHDTSDGKIKYEQTYKGLPIMNNNRAELTFDVKD
                     DTVKSYEQSAMEDILPSKGSNNEPRQVISAHKAIEALYYNQYLKHDQEVENIRLGYYT
                     VVKETNIQVLQANWEIKVKDANGTHTYYVEAISSNPQIIEQ"
     gene            complement(3260..4597)
                     /locus_tag="PTC28_000250"
     CDS             complement(3260..4597)
                     /locus_tag="PTC28_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715574.1"
                     /translation="MRTRELIKSIVLALLVLSSIVLTVMIWNFSPDLTDADNVHTKDA
                     TEAIGTRYDKAFSQVVTPLQLVHIENDDVKGMPANKDVNALMTVFQKHRIIEVEDIQN
                     DDVVLLRNLSNHFVVLDYPSDIPLSMYLNEVIEIPAKVPTNFKFNRLILDVDDAQHVI
                     IYAMQPNHQRAIKLETNLNTKYVQQRIQKMKADLEPYSNVVTNRSTINKATYMYAVKA
                     PKNLKAYRTIFNRINVEDLNAILFDNTPIVRTTNSGNTTYNNNTGVVNYNANRETYDY
                     TNLSEDEHSTRNMNVNLPRAFDFINKHGGFTDDFRLFSANNDRGHIIYQMFLNGRPIF
                     YPNQLNEIRVLWGERGLYEYSRGLLKTNVTIDNGEKPESLPDLEDVRSVLASKGDIDF
                     TKVQQMVIGYRMNPIKGPENSIEIQEGSQFIPTWYIQYDHEWYEYKDGELIET"
     gene            complement(4587..6419)
                     /gene="walK"
                     /locus_tag="PTC28_000251"
     CDS             complement(4587..6419)
                     /gene="walK"
                     /locus_tag="PTC28_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall metabolism sensor histidine kinase
                     WalK"
                     /protein_id="HDK5715575.1"
                     /translation="MKWLKQFQSLHTKLVIVYVLLIIIGMQIIGLYFTNSLEKEMTET
                     FKTNISQNAKQIELGIEKIYADGNDSGNTQKDIQNLLNEYANRNEMIEIRFIDKDQII
                     IATSKQSNRTIINQKANDSSIQKALSLGQENSDTVLKDYGEGKQRVWIKNMPVVTGDG
                     MIGDIYIESNINQVYDQLSNINQIFIVGTGISLIITVILGFFIARTITKPITDMRNQT
                     VEMSKGNYTQRVKIYGNDEIGELALAFNNLSKRVQEAQANTESEKRRLDSVITHMSDG
                     VIATDRRGRVRIINDMALKMLGKSKEEVSGHFIFDVLDLQDEFSLEELNENNDSVLID
                     INEEEGIIARVNFSTIVQDTGFVTGYIAVLHDVTEQQQIERERREFVANVSHELRTPL
                     TSMNSYIEALEEGAWRDESIAPQFLSVTREETERMIRLVNDLLHLSKMDNETETITKE
                     IVDFNMFINKIINRHEMAAKDTTFVRDIPRETIFTEVDPDKMTQVFDNVITNAMKYSR
                     GEKRVEFHVKHNPVHSRLTIRIKDNGIGIPINKVDKIFDRFFRVDKARTRKMGGTGLG
                     LAISKEIVEAHNGRIWANSVEGQGTSIFITLPCEKIEEGDWDAN"
     gene            complement(6432..7133)
                     /locus_tag="PTC28_000252"
     CDS             complement(6432..7133)
                     /locus_tag="PTC28_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDK5715576.1"
                     /translation="MARKVVVVDDEKPIADILEFNLKKEGYEVFVAYDGNDAVDLIYE
                     KEPDIVLLDIMLPGQDGMEVCREVRKKFEMPIIMLTAKDSEIDKVLGLELGADDYVTK
                     PFSTRELIARVKANLRRHYTQPSQENHMQTNEITIKDIVIYPDAYSIKKRGEDIDLTH
                     REFELFHYLSKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPDY
                     IVTRRGVGYFLQQHD"
     gene            complement(7284..7622)
                     /locus_tag="PTC28_000253"
     CDS             complement(7284..7622)
                     /locus_tag="PTC28_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SdpI family protein"
                     /protein_id="HDK5715577.1"
                     /translation="MILFSSCLFLFLLAITFQHNPPQEINYFIGFRTRKSMKNQKNWE
                     IAQVAFAHQLKVISGYTALCSILLCIVDIVLIVLDNDVLFVASMVTQAIVLIGILLAV
                     YLKVNKKLDT"
     gene            complement(8061..8134)
                     /locus_tag="PTC28_000254"
     tRNA            complement(8061..8134)
                     /locus_tag="PTC28_000254"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8098..8100),aa:Asp,seq:gtc)
     gene            complement(8141..8215)
                     /locus_tag="PTC28_000255"
     tRNA            complement(8141..8215)
                     /locus_tag="PTC28_000255"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8180..8182),aa:Glu,seq:ttc)
     gene            8322..9215
                     /locus_tag="PTC28_000256"
     CDS             8322..9215
                     /locus_tag="PTC28_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HDK5715578.1"
                     /translation="MEIQAESNVAYIKEKPKKPRQFFKRFFFITLGAVLMGVALELFL
                     VPNQLLDGGIVGISIILSHLLGFKLGIFIFILNLPFFFLGYKQIGKTFAISTLYAISI
                     LSVTTIVLHPIDPVINDKFLVTIFGGAVLGIGVGIVLRYGGSLDGTEILSILVHSKLP
                     FSVGEIVMFINFFIFGIAGFVFTWESALFSVVAYFIASKMIDTVLLGFDESKAVWVIS
                     DAYKDIGEAINSRLGRGVTYLKGEGAYTGEDKRVIFCVITRLEEAKLKDIVMEIDEKA
                     FLSIGNVSEVRGGNHRKRDIH"
     gene            complement(9434..10717)
                     /locus_tag="PTC28_000257"
     CDS             complement(9434..10717)
                     /locus_tag="PTC28_000257"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HDK5715579.1"
                     /translation="MSSIVVVGTQWGDEGKGKITDFLAEQADVIARFSGGNNAGHTIK
                     FDGETYKLHLVPSGIFYKDKLAVIGNGVVIDPVALLKELDGLNERGIATDNLRISNRA
                     HVILPYHIQQDELEEARRGDNKIGTTKKGIGPAYVDKAQRMGIRVADLLDKEVFEQRL
                     KENLEYKNDYFQGMFKQDAPSFEDIFETYYAAGQRLAPYVTDTAKVLDDAFVADERVL
                     FEGAQGVMLDIDHGTYPFVTSSNPVAGNVTVGAGVGPTNVSKVVGVCKAYTSRVGDGP
                     FPTELFDEKGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLSINSIDVL
                     TGLDEVKICTAYELDGKEITEYPANLNDLKRCEPIFETLPGWTEDITGVRTMEELPDN
                     ARRYLERISELCNVHISIFSVGPDRNQTNVVEKLW"
     gene            complement(11089..12489)
                     /gene="dnaB"
                     /locus_tag="PTC28_000258"
     CDS             complement(11089..12489)
                     /gene="dnaB"
                     /locus_tag="PTC28_000258"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDK5715580.1"
                     /translation="MDEMYEHNRMPHSHEAEQSVLGAIFLDPELMSSTQEILLPESFY
                     RGAHQHIFRAMMDLNEDGKDIDIVTVLDRLTQEGVVNEAGGPQYLAEITSNVPTTRNI
                     QYYTDVVFKNAVKRKLIHTADSIANDGYNDELDLDTVLNDAERRILELSSTRESDGFK
                     DIRDVLGQVYDNAEQLDQNSGQTPGIPTGYRDLDQMTAGFNRNDLIILAARPSVGKTA
                     FALNIAQKVATHEDQYTVGIFSLEMGADQLATRMICSSGNVDSNRLRTGTMTEEDWNR
                     FTVAVGKLSRTKIFIDDTPGVRITDIRSKCRRLKQEHGLDMIVIDYLQLIQGSGSRAS
                     DNRQQEVSEISRMLKAIARELECPVIALSQLSRGVEQRQDKRPMMSDIRESGSIEQDA
                     DIVAFLYRDDYYNRGDGDDDDDDGGFEPQTNDENGEIEIIIAKQRNGPTGTVKLHFMK
                     QYNKFTDIDYAHADMG"
     gene            complement(12950..13396)
                     /gene="rplI"
                     /locus_tag="PTC28_000259"
     CDS             complement(12950..13396)
                     /gene="rplI"
                     /locus_tag="PTC28_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HDK5715581.1"
                     /translation="MKVIFTQDVKGKGKQGEVKDVPVGYANNFLIKNGYAVEATPGNL
                     KQLEQKNKRIEKDKQQELEDAKALKERLAALEVEVKAKSGEGGKLFGSISTKQIAEAL
                     KAQHDIKIDKRKMELPHGIHALGYTNVPVKLHKEVEGTIRVHTVEQ"
     gene            complement(13393..15360)
                     /locus_tag="PTC28_000260"
     CDS             complement(13393..15360)
                     /locus_tag="PTC28_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HDK5715582.1"
                     /translation="MNRHSMKKALIVPFLVITVTAIIIVGLSFFFNQWLAFIAAILLF
                     VMLIISVFIFRRFYRYLDRYLDDLSGKISIGSDRAVKTMPLGLIVLNENDQIEWVNPF
                     MSERIERNVISDPINEVYPNILKQLEKAKEIEIADGAYAYRVRYSEKEHILYFIDMTE
                     EATIQQAYDDQQPIIATLFLDNYDEITQNMNDTQRSEINSMVTRVISRWAQEHNVYFK
                     RYSSDQFIAYLNRRILRELEETKFDILSQLREKSVGYRAQLTLSIGVGEGSENLIDLG
                     ELSQSGLDLALGRGGDQVAIKNMNGNVRFYGGKTDPMEKRTRVRARVISHALKDILLE
                     GDKVIVMGHKRPDLDAIGAAIGVTRFAMMNNLEAYIVLNESDIDPTLRRVMDEIDEKP
                     ELKERFVTSDDAWNMMTSRTTLVVVDTHKPEMVIDENILNKANRKVVIDHHRRGESFI
                     SSPLLVYMEPYASSTAELVTELLEYQPTEQRLTRLESTVMYAGIIVDTRNFTLRTGSR
                     TFDAASYLRAHGADTILTQHFLKDDIETYINRSELIRTVKLQENGIAIAHGPDDKIYH
                     PVTVAQAADELLSLDGVEAAYVVARREENLIGMSARSLGEFNVQLTMEALGGGGHLTN
                     AATQLEGVTVEAAIEKLQQAINEQLDRSDES"
     gene            complement(15365..16276)
                     /locus_tag="PTC28_000261"
     CDS             complement(15365..16276)
                     /locus_tag="PTC28_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2232 domain-containing protein"
                     /protein_id="HDK5715583.1"
                     /translation="MFSKINPKATLISIVALLVVTLVIHVMPGLAIILACFSFIPGIV
                     LWYQSKHSFGLVALIAIILSTLTGNVFVMTFLIIILVLSMVISQLLIQRASKERILYL
                     TTFVASVLTLSAMMILQTLKKIPYADDLLQPYRAIMHQAAELENLDQQAQEILNNSIQ
                     QLAIQLPGMIVVAIAIYVFITLLIIFPILRKFKVATPVFRPLFFWQMKRSVFIMYALA
                     LLTTITTQPATTPNSIGINFQIVLGFLLVIQGLSFIHFFASIKRMPGALRVILVIVGV
                     LFYPMTRLIGLLDLGLNLKRMIKNDKR"
     gene            complement(16508..17473)
                     /locus_tag="PTC28_000262"
     CDS             complement(16508..17473)
                     /locus_tag="PTC28_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDK5715584.1"
                     /translation="MVNYRVDTLALGAFTTESGETIENLKLQYEYVGYPGQPLVVVCH
                     ALTGNHLTYGTEDNPGWWREIIDGGYMPVHDYQFLTFNVIGSPFGSSSRLTDPNFPQK
                     LTLRDIVRALEKGIEALGHQKIDILIGGSLGGMQVMELLYNQKFEVKKAVILAATEKT
                     SSYSRAFNEIARQAIHLAGEEGLSIARQLGFLTYRSSKSYDARFTPDEVVLYQKHQGD
                     KFKEQFDLQCYLTLLDVLDSHDIHHGRDDVANVFQSLDTKVLTLGFTDDLLYPDDQVA
                     ALGCYFKYHRHFFVPDNVGHDGFLLNFNDWAPYLYHFLKVSRFRR"
     regulatory      complement(17557..17661)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            complement(17728..18057)
                     /locus_tag="PTC28_000263"
     CDS             complement(17728..18057)
                     /locus_tag="PTC28_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HDK5715585.1"
                     /translation="MSMYVFWTIFLAGLGTLLIRITPFVMISRMELSDKVLKWLTFIP
                     ITLFTALVVDGFIQQQEGMMGYTLNWHFIIALIPTLIIAFWTRRLTITVIVGMVSVAL
                     LRIIGLF"
     gene            complement(18054..18746)
                     /locus_tag="PTC28_000264"
     CDS             complement(18054..18746)
                     /locus_tag="PTC28_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002498766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HDK5715586.1"
                     /translation="MPYTTFKQGIRDCLPTVLGYAGVGFSFGIVSVASGFNILEILLL
                     SLLVYAGAAQFIIIALIAVQTPIWVIVLTAMIVNSRMFLLSMTLAPNFKHDHFIHRVG
                     VGSLLTDETFAVAITPYSKGHTMTYQWLYGLNLLAYLFWALVTVLGGLLGDFFQHPEV
                     FGLDYAITAMFIFLAISQFEGITKSKLRVYLYLVAIVIVMMLLLSLFLPSYLAILLAS
                     TLSATIGMVIDR"
     gene            complement(19060..20340)
                     /gene="serS"
                     /locus_tag="PTC28_000265"
     CDS             complement(19060..20340)
                     /gene="serS"
                     /locus_tag="PTC28_000265"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HDK5715587.1"
                     /translation="MLDIKLFRNEPERVKKKIALRQMDPSVVDEVLALDQQRRDYIQQ
                     TEELKAERNKASQQIAEKKRNKENADDAIKAQREVGEKIKNIDAQLKEADTKLNDILS
                     RIPNLIHDDVPEGEDDSDNVELKRWGTPREFDFEAKAHWDLVESLEMADFDRAARVSG
                     ARFVYLTNDGAKLERALMNFMITMHTTQHGYREMMVPQLVNAKAMYGTGQLPKFEEDL
                     FKVEKEGLYTIPTAEVPLTNYYRDEIVQPGVLPAKFTGQSACFRSEAGSAGRDTRGLI
                     RLHQFNKVEMVRIEKPEDSWDALEEMTSNAEAILEALNLPYRRVILCTGDIGFGASKT
                     YDLEVWLPSYSDYKEISSCSNCVDFQARRANIRFKRDKDAKPEYAHTLNGSGLAVGRT
                     FAAIVENYQNEDGTITVPEALVPFMGGQTVIKPL"
     gene            complement(20658..22160)
                     /gene="hutH"
                     /locus_tag="PTC28_000266"
     CDS             complement(20658..22160)
                     /gene="hutH"
                     /locus_tag="PTC28_000266"
                     /EC_number="4.3.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ammonia-lyase"
                     /protein_id="HDK5715588.1"
                     /translation="MTLRLTGEQLTIEAIRQFLAYEDKVKVTEEAQVRVERSRAIVER
                     IIANKETVYGITTGFGLFSDVLIDQQKYNQLQVNLIRSHACGIGAPFASNVSLVMMIL
                     RLNTLLKGHSGVTMELVDQLVFFINQRIIPVIPQQGSLGASGDLAPLSHLALALIGEG
                     KVEYQGEVLDSSEVLKQLNRKPLTLQAKEGLALINGTQAMTAQGVISWIETENLAYQA
                     EWIAALTHQALHGITDAYHEAVHQVRNFEEQTAVARRMSDWLEGSKLTTRQGEMRVQD
                     PYTLRCIPQIHGASFQVFQYVREKLEFEMNAANDNPLIFNEGDKTLVISGGNFHGQPV
                     AFALDFLKLGTSELANVAERRLERLVNPQLNGGLPAFLSPEPGLQSGAMIMQYAAASL
                     VSENKTLAHPASVDSIPSSANQEDHVSMGTIASRHGYQILENTRRVIAIEAIIASQAV
                     EIRGVEQLSPKTREQYEALRKIVPSIQEDRPFHQDIENVAKYLKNLAYQK"
     gene            22510..23325
                     /locus_tag="PTC28_000267"
     CDS             22510..23325
                     /locus_tag="PTC28_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HDK5715589.1"
                     /translation="MKTLSAVHIPKRKDDTHKGDYGRILLIGGNANLGGAIMLAARAC
                     VYSGSGLITVATHPTNHVALHSRCPEAMVIDINDTKKLTKMIEASDCILIGPGLGLDF
                     KGNNAMTFLLQNIQPHHTLIVDGDAISIVSKLKPEIPACNVIYTPHQKEWERLSGIPI
                     EEQTYETNRAAVDRLGGTVVLKKHGTEIYFENDAYKLEVGSPAMATGGMGDTLAGMIT
                     SFVGQFDNVIDAITSATYTHSYIGDKLSKDMYVVPPSKIIDEIPYAMKQLEEK"
     gene            complement(23575..26211)
                     /gene="gyrA"
                     /locus_tag="PTC28_000268"
     CDS             complement(23575..26211)
                     /gene="gyrA"
                     /locus_tag="PTC28_000268"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HDK5715590.1"
                     /translation="MAETPESRINERNISKEMRESFLDYAMSVIVSRALPDVRDGLKP
                     VHRRILYGLNEQGMTPDKPYKKSARIVGDVMGKYHPHGDLSIYEAMVRMAQDFSYRYP
                     LVDGQGNFGSMDGDGAAAMRYTEARMTKLALELLRDINKDTIDFIDNYDGNEREPSVL
                     PSRFPNLLVNGASGIAVGMATNIPPHNMREVIDGVLSLSHNPDITISELMEDIQGPDF
                     PTAGLILGKSGIRRAYETGRGSVIMRAKAEIESRGGGRDRIVVTEIPFQVNKARMIEK
                     IAELVRDKKIDGITDLRDETSLRTGVRVVIDVRKDANASVILNNLYKQTPLQTSFGVN
                     MIALVNGRPQLINLKQALYHYLEHQKEVVRRRTEYNLRKAKDRAHILEGLRIALDHID
                     EIITIIRESETDKVAMESLQSRFALSERQAQAILDMRLRRLTGLERDKIEQEYNDLIA
                     YIAELEAILADEEKLLELVREELTEIKEKFGDDRRTEIQLGGIDQLEDEDLIPEEQIV
                     ITLSHNNYIKRLPASTYRAQNRGGRGVQGMNTLDDDFVSQLVTTSTHDQVLFFTNKGR
                     VYKLKGYEVPELSRQSKGIPIVNVIELDQDEVISTMIAVKDLDSEEDFLVFVTKKGLI
                     KRSALSNFNRINRNGKIAIKFRDDDELIAVRLTDGEKHILIGTAQASLIRFKEADVRA
                     MSRIAAGVKGIRLRDGDEVIGLDVADDDNQDKILVVTEKGYGKRTSIEDYRLSNRGGM
                     GVKTAKLTERNGRLVCITTVEGDEDLMVVTNQGVIIRMEVSNISVNGRMAQGVRLIRL
                     DEEQYVSTVAKVKKEPEDIEADEHTTASEASDDVEVVVDDVTPGDTIHTEAPEPEVSP
                     ERETLREDFMDRVNEDIENEDE"
     gene            complement(26247..28169)
                     /gene="gyrB"
                     /locus_tag="PTC28_000269"
     CDS             complement(26247..28169)
                     /gene="gyrB"
                     /locus_tag="PTC28_000269"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017636727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HDK5715591.1"
                     /translation="MADVNNSENYGASQIQVLEGLEAVRKRPGMYIGSTSERGLHHLV
                     WEIVDNSIDEALAGYADNIEVVIEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVL
                     HAGGKFGGGGYKVSGGLHGVGSSVVNALSDTLEVYVHRDGRIHHQAYHKGVPAFDLKQ
                     VGDTDQTGTVIRFKADGTIFQETTVYNYETLQKRIRELAFLNKGIRITLTDERDEENV
                     REDSYHYEGGIKSYVELINENKEPLHDEPIYVHQTRDDIEVEIALQYNSGFATNLLTY
                     ANNIHTYEGGTHEDGFKRALTRVLNNYGTQSKLIKEDKDRLSGEDTREGLTAVVSIKH
                     GDPQFEGQTKTKLGNSEVRQIVDRVFSELFERFLYEHPQVARIIVEKGIMASRARIAA
                     KKAREVTRRKSALDISSLPGKLADCSSKDPSESEIFLVEGDSAGGSTKSGRDSRTQAI
                     LPLRGKILNVEKARLDKILNNNEIRQMVTAFGTGIGGEFDISKARYHKIVIMTDADVD
                     GAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKEKLN
                     PTPKWSIARYKGLGEMNADQLWETTMNPENRAMLQVTLDDAIEADQTFEMLMGDVVEN
                     RRQFIEDNAVYANLDF"
     gene            complement(28192..29307)
                     /gene="recF"
                     /locus_tag="PTC28_000270"
     CDS             complement(28192..29307)
                     /gene="recF"
                     /locus_tag="PTC28_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HDK5715592.1"
                     /translation="MKLKTLQLENYRNYEQISLDCHPEVNILIGENAQGKTNLLESIY
                     TLALAKSHRTTNDRELIRFNAEYAKIEGELNFRHGTMPLTMFITKKGKKVKVNHLEQS
                     RLTQYIGHLNVVLFAPEDLSIVKGAPQVRRRFIDMELGQISRLYLNDLSQYQRILKQR
                     NHYLKQLQLKKTQDTTMLEVLNHQFVEYAVKVTQRRQQFIKELELLAAPIHSGITNER
                     ETLTLQYLPSIKIEDVSQSEDVLIQQVLEDVQHHMEREIERGVSLYGPHRDDLAFQVN
                     GMDAQTYGSQGQQRTTALSIKLAEIELMNQEVGEYPILLLDDVLSELDDARQTHLLST
                     IQHKVQTFVTTTSVDGIDHEIMKDAKVYRITQGNIKQ"
     gene            complement(29304..29543)
                     /locus_tag="PTC28_000271"
     CDS             complement(29304..29543)
                     /locus_tag="PTC28_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016425730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein YaaA"
                     /protein_id="HDK5715593.1"
                     /translation="MNGVMNLAEEVIVDGALTLGQFLNYEGIIESGGQAKWFLSEYEV
                     FLNGELETRRGKKLQDGDQLDIPEVGSYIIKFGEQ"
     gene            complement(29663..30352)
                     /locus_tag="PTC28_000272"
     CDS             complement(29663..30352)
                     /locus_tag="PTC28_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HDK5715594.1"
                     /translation="MLKKNKWLIIFIVVILVAGIFFSLATFKTSKKGNSGSGETLAAE
                     TQKQPTQGKKDSKVLLVEFGDFKCPYCGDFERNIKPKLEKEYIDNNKVEFRYVNVLIH
                     GEESELGAKAALAVNQYAPDKYWQFHHALFEQQPNNKDDVGSQHWLTDDLIQQQLQKL
                     DLSEQERKQITVAYRDEKGAIAKRAQEDHALAKKEEVPYVPALYVNGKQVEDETDFDA
                     IKNEIDKALEQ"
     gene            complement(30635..31768)
                     /gene="dnaN"
                     /locus_tag="PTC28_000273"
     CDS             complement(30635..31768)
                     /gene="dnaN"
                     /locus_tag="PTC28_000273"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000969809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HDK5715595.1"
                     /translation="MMEFSIQRDYFITQLNDTLKAISPRATLPILTGIKIDATNEGIV
                     LTGSDSEISIEITIPNQVDGQEIINVVEPGSVVLPGRFFVDIIKKLPGKEVKLSTNEQ
                     FQTLITSAHSEFNLSGLDPDQYPLLPQVSSDDALQLPVKVLKNIIAQTNFAVSTSETR
                     PVLTGVNWLIQQNELLCTATDSHRLAVRKLKLEEEIEDKNVIIPGKALAELNKIMTDS
                     EDHIDIFFASNQVLFRVGNVNFISRLLEGHYPDTSRLFPENYEIKLGLNNSDFYHAID
                     RASLLAREGGNNVIKLSTGDTQIELSSTSPEIGTVKEEVTANDVEGGNLKISFNSKYM
                     MDALKAIDNEEVEVEFFGTMKPFILKPKDDDTVTQLILPIRTY"
     gene            complement(31940..33283)
                     /gene="dnaA"
                     /locus_tag="PTC28_000274"
     CDS             complement(31940..33283)
                     /gene="dnaA"
                     /locus_tag="PTC28_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016898446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HDK5715596.1"
                     /translation="MSEQEIWDNVLSLCKENVTTVSYDTWLKDTTLYALSRDEAIVIA
                     AQPFIANWLTTNYTKLIKQYLEAVTQQTINTIKFITEEDLQELNVASSSHQSGHSTPV
                     EPVVSGEQFNTNNTFETFVIGPGNRFPHAASLAVAESPANAYNPLFIYGGVGLGKTHL
                     MHAIGHYVLENNPDAKVLYTSSEKFTNEFIQSIRNNDTESFREKYRNIDILLIDDIQF
                     IQKKEQTQEEFFHTFNDLHQNKKQIVISSDRPPKEISTLEERLKSRFQWGLIVDITPP
                     DFETRMAILQKKTEEENLDIPIESLTYIANQIQTNIRELEGALTRVLAYSKLQGKPIT
                     TELTADALKDIIQVTKTKKITIQDIQKVVGEYYGVRIEDFVAKKRTKSIAYPRQIAMY
                     LSRELTDFSLPKIGEEFGGRDHTTVIHAHDKIKKDIENDPTLRQEIESLEKDIRS"
     gene            33827..33964
                     /gene="rpmH"
                     /locus_tag="PTC28_000275"
     CDS             33827..33964
                     /gene="rpmH"
                     /locus_tag="PTC28_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000240855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HDK5715597.1"
                     /translation="MVKRTYQPNKRKHSKVHGFRKRMSTKNGRKVLARRRRKGRKVLS
                     A"
     gene            34138..34485
                     /gene="rnpA"
                     /locus_tag="PTC28_000276"
     CDS             34138..34485
                     /gene="rnpA"
                     /locus_tag="PTC28_000276"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012664032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HDK5715598.1"
                     /translation="MEKAYRIKKNADFQLIYRKGKSVANRQFVVYTYETQTLTHFRLG
                     ISVSKKLGNAVTRNRIKRSIRECFKVHKEDILPKDIIVIARFPAKTMSTAEIQKSLEH
                     VLKIAKVFNKRIK"
     gene            34620..36041
                     /gene="mnmE"
                     /locus_tag="PTC28_000277"
     CDS             34620..36041
                     /gene="mnmE"
                     /locus_tag="PTC28_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000393777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HDK5715599.1"
                     /translation="MKRNIVLKGGTSIVEQLDTITSISTPMGEGAIGIVRLSGHDAVE
                     IADKLYKGKHLLKDVPTHTINYGHIIDPETEEVVEEVMVSVLRAPRTFTREDIVEINC
                     HGGILTINRVLELTMTYGARMAEPGEYTKRAFLNGRIDLSQAEAVMDFIRSKTDRASK
                     VAMNQIEGRLSDLIKRQRQSILEILAQVEVNIDYPEYDDVEDATTEFLLERSQDIKQE
                     IQKLLDTGVQGKIMREGLSTVIVGKPNVGKSSMLNNLIQDNKAIVTEVAGTTRDVLEE
                     YVNVRGVPLRLVDTAGIRETEDIVERIGVERSRKALSEADLILFVLNYNEPLTEDDRK
                     LYEVIKNEDAIVIINKTDLEQRLDLAEVEAMVGDMPIIQTSMLQQQGIDELEIQIRDL
                     FFGGEVQSQDMTYVSNSRHISLLKQAKNAIQDAIDAAEMGVPMDMVQIDLTRTWEILG
                     EIIGESASEELIDQLFSQFCLGK"
     gene            36060..37934
                     /gene="mnmG"
                     /locus_tag="PTC28_000278"
     CDS             36060..37934
                     /gene="mnmG"
                     /locus_tag="PTC28_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002499187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HDK5715600.1"
                     /translation="MVKSFDVIVVGAGHSGIEAGLASARRGAHTLMLTINLDNIAFMP
                     CNPSVGGPAKGIVVREIDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLY
                     QQEMKRILEDEDNLEVMQGMVDELIIEDGEVKGVRTNIGTEYRAKAVILTTGTFLRGE
                     IILGNLKYSSGPNHQLPSITLADHLRELGFEVVRFKTGTPPRVNAKTIDYSKTEIQPG
                     DDVGRAFSYDTTEYILDQLPCWLTYTNGETHQVIDDNLHLSAMYSGMIKGTGPRYCPS
                     IEDKFVRFNDKPRHQLFLEPEGRNTNEVYVQGLSTSLPEEVQRQMLATIPGLEKADMM
                     RAGYAIEYDALVPTQLWPTLETKMIKNLYTAGQINGTSGYEEAAGQGLMAGINAAARV
                     LGKEETILRRSDAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTDLGH
                     ELGLISDERYERFNTKRQQITDEMARLEQIRVKPSERVQQIIEEKGGSRLKDGILAKE
                     LLRRPEMTYETIIEILEEERQLPADVEEQVEIQTKYEGYITKSLQQVDKVKRMEQKKI
                     PEDLDYSQIDSLATEAREKLAEVKPLNIAQASRISGVNPADISILLVYLEQGKIQRVK
                     "
     gene            37935..38654
                     /gene="rsmG"
                     /locus_tag="PTC28_000279"
     CDS             37935..38654
                     /gene="rsmG"
                     /locus_tag="PTC28_000279"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016425723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HDK5715601.1"
                     /translation="MSVEWLATQLSEHGITLSEHQKQQFEKYYEMLVEWNEKINLTSI
                     TEKHEVYLKHFYDSITPSFYHDFNQPLNLCDVGAGAGFPSIPLKIIFPEIHVTIVDAL
                     NKRIQFLNQLAEALELEGVRFVHDRAETFAKNEDYRASFDVVTARAVARMTVLSELCI
                     PLVKKHGVFLALKSSKGQEELEEARFAVGVLGGRIERVDTFDLPEDAGERQIVTIEKR
                     SQTPKKYPRKPGTPNKSPLVE"
     gene            38692..39543
                     /locus_tag="PTC28_000280"
     CDS             38692..39543
                     /locus_tag="PTC28_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001831794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HDK5715602.1"
                     /translation="MKKPFSKLFGLKNKDDLLTVTDEDKKGVQSINIEKIVPNRYQPR
                     QKFDTARIEELAESIRAHGLLQPIVVRPIEENMYEIIAGERRFRALQMNQMTDAEVLV
                     RHLDDEETAVVALIENIQRENLSAVEEAEAYKKLLAFEGITQAELAKSVGKSQSFIAN
                     KLRLLKLTPVVLEAVREHQITERHARALVGQTPEFQEEMLGVILKEQLNVKQTEERLK
                     ATTVKDDVVEEKVVARPPEFAQDVSEARDIIADSLMEIRANGIRYEQKEKEHEDYVEI
                     QIRLYRK"
     gene            39851..40164
                     /locus_tag="PTC28_000281"
                     /pseudo
     CDS             39851..40164
                     /locus_tag="PTC28_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728504.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(40405..40992)
                     /locus_tag="PTC28_000282"
     CDS             complement(40405..40992)
                     /locus_tag="PTC28_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDK5715603.1"
                     /translation="MEHIFKQGEPSQPTFVLLHGTGGDEHDLLPVAEMLDPSYNVLGV
                     RGNVSENGMNRFFKRHGEGQYDVEDLKFRTTELHEFLESAANQYNFDLDKVVLVGFSN
                     GSNIAISLMLEENMPYKKGLLFAPLYPLEVPENLDLSGKSVYLSMGKNDPIVPVSESE
                     HVRAIFKDRGADVTEYWVNSHELTQGTVLAAKETL"
     gene            complement(41014..41631)
                     /locus_tag="PTC28_000283"
     CDS             complement(41014..41631)
                     /locus_tag="PTC28_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HDK5715604.1"
                     /translation="MYAFYASELSKQQMYKFLIGSVVPRPIALITSQSEEGLLNIAPF
                     SFFNIVSSEPALLSVAVNRKEGAMKDTARNILTTKEAVVHVVTEANVANANQTAALLP
                     PDESELDHTTFTTTDSEMVNVPSLNESSIRFEVKLYQHVEIKNDRNENTNDLLLLEIQ
                     KVYIDEDLFDLEKGYVDVENVQPVSRLAGDNYARLGETFTIKRPR"
     gene            complement(41677..42639)
                     /locus_tag="PTC28_000284"
     CDS             complement(41677..42639)
                     /locus_tag="PTC28_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-cleaving dioxygenase"
                     /protein_id="HDK5715605.1"
                     /translation="MKQYPLKGIHHVTAMTDDAERNYHFFTDVLGMRLVKKTVNQDDI
                     YTYHTFFADDEGHAGTDMTFFDFPNNPKGAPGTNSISRTGFRVPNDAALEYYKARFDE
                     FGVKHDDIDTVFGTKVLRFEEEDGQRYQLFSDENNTGVEPGVAWKNGPVPQDKAIYGL
                     GPIEITVSYYDEFKQALMDLYGMKPIKEEENVTLLEVGKGGNGGQVILRKDETTESRP
                     GYGQVHHVSFRVENDEAIEEWFERYNELGVRSSGIVDRFYFKALYTRVGHILIELSTD
                     GPGFMGDEPYETLGETLSLPPFLEDQREYIESEVRPFDTTRSTK"
     gene            complement(42722..43147)
                     /locus_tag="PTC28_000285"
     CDS             complement(42722..43147)
                     /locus_tag="PTC28_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDK5715606.1"
                     /translation="MQRTETALKTLIGIKRTNDMIDKTIRNDVKSYGLSVTAFAVLEL
                     LYNKGEQSIQRIQERILIASSSTTYVVNSLEQKGYLKRRQCHKDKRVSYVALTDKGQQ
                     LMEKIFPEHAQAIETVFSVLTDEELNTLQQVLKTLSTQP"
     gene            43314..43589
                     /locus_tag="PTC28_000286"
     CDS             43314..43589
                     /locus_tag="PTC28_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDK5715607.1"
                     /translation="MAEVKKGHNKYYVGDSESNPEAIMTYVPGGTQIIIDHTVVGDSL
                     RGQGVGKQLVEAAVKDARENNFKIHATCPFAKSVLERTPEYHDVYGG"
     gene            complement(43667..44584)
                     /locus_tag="PTC28_000287"
     CDS             complement(43667..44584)
                     /locus_tag="PTC28_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715608.1"
                     /translation="MLKLAEWKDEKETLHRLAQILGKHKLASAFQEPQWGHVILDITT
                     TGFSTGLLFYQSSTYSVSVNLVKHLILIETNNGEETIPLKDGVTIQSYYEQIQDALHR
                     HGIEVTINERPQEVADTTLFSQDTKRHHYNEAISKEVLKLMSFATRALQYFIAPYRAR
                     KIKPGLFWGTFDISCLVHYNSFHEMFEPNQVIEYAAFDEHFIEFGFWFGDDRFEGPTF
                     FILPYPFVDKSFTFDQPLISEAYFDKQLTELIYEMNAMTPETLETLSTFFNQGFEIFK
                     SHLSWENCHHYHVPLKMNENQIQKMPYAH"
BASE COUNT        13161 a         9124 c         8232 g        14164 t
ORIGIN      
        1 caactgaata tttatcttct tttatatgca cttttaactg cttgggtaac ttatcatgga
       61 ctaaagtttt atatagatca cctttatccc aatcagattt tttaactaca ttattggtac
      121 gtttctcttt aattaattta aggacctgca taaagttgtc tatcatttga aattccctcc
      181 tattataaaa tatattatgt ctcattttct tcaatatgta cttatttata ttttaccgta
      241 atttactata tttagttgca gaaagaattt tctcaaagct agaactttgc ttcactataa
      301 gtattcagta taaagaatat ttcgctatta tttacttgaa atgaaagact gcggaggcta
      361 actatgtcaa aaatcatgaa cctcattact tatgataagc ttcttaaaaa cataacagca
      421 attcacataa acctcatatg ttctgataca ttcaaaatcc ctttatgaag cggctgaaaa
      481 aaccgcatca tttatgatat gcttctcccc gcatgatttt aaaagctcga tacacctgct
      541 ccagcaagat gacgcgcatc atttggtgtg gaaaggtcat tttactgaac gacaacgcaa
      601 aatcactgcg tcgtaatacg gcctcgtgta gcccatgtga gccgcctatg acaaatgtga
      661 agtcacttgc gccctgtgtc atgcgctgat cgagtgtttg tgccaagtct tcagagctta
      721 acattttacc agcgatttct aatgtgatga cggtgctttg tggtttgatt ttacttaaga
      781 tccgctgtcc ttctttttct ttcacttgtt cgatttcttt tgcactcatt gtttcgggtg
      841 ctttttcatc tggaacttcg accacttcta ttttggagta tgcgccgagc cgtttggtgt
      901 attctgcaat ggcgagtttc caatattttt cttttaattt ccctactgcc aatattgtta
      961 ttttcatttt gccctcctat gcctatcaat ccgaagttat ccacaggtta ttcagttacc
     1021 cacatattta tctctattat accgtttttg catttcgttt tcacacagaa atttaaaaat
     1081 tgattactat attcggggat aagtctgttg atatgtggat aactttgtta gtaaattggt
     1141 tattaacatg tggattgttt ataacttgct taatttgtgc acattcatgg ggataactca
     1201 attgattcga gtatttttat acacagctat tattgatatc cgtaaaaaaa gaggtcagac
     1261 atctaactgt ccaaacctct taaatttatt tatattttga tgaaacatgt cattgataga
     1321 ttacaagaat aatgatttag ttggacattc gttattcttt ttgaatgcca atctgggcga
     1381 gtctcctaaa aaatatgtga aaactgttaa caaacttctt tttagcttaa cagtgattac
     1441 tgtttaacgc agtagctgtc tgacttctca atgttttact tttgagaagc ccagtcagcc
     1501 ttgcgggggc agtactacga aatctttgtt gcacataaga tttctgtaca gctccggaaa
     1561 atccaattta gcttctttca ggtttccctt ccaatcaagc caaattgagt tgagtcaagt
     1621 ccctaggaaa cgcgacccca agatagctat caaaaaagta aattctgata cttccaacct
     1681 acaatgtata aatcggtgtt gggatggctt tatctgtatc gcacagcttc acttcattca
     1741 ctgtatcgat atcatgcgcc tgcaagattt gactgacact catacgggcc aagtctttca
     1801 tattattgtc ttgtgataaa tgagacaaat aaatgcgctt cgtttgacct gtaatcacgt
     1861 ctttcatcgc gtgtgctgcg tcttcgttcg aaacatgacc catatcactc aggatacgtt
     1921 gcttcgtctt ccatggatag cggcacatac gcaacatatc gacgtcgtga ttgctctcaa
     1981 acatgaacgc atcactgcca cgaatcatcc ctttcatacg ctctgacacg taaccagtat
     2041 ctgtaatcat cgtaaacttt ttgtagttat tatgaaaaat gtagaactgt gggtcaatgg
     2101 cgtcatgaga cacgttaaat gactcaatat caaatcctgc gatagatttc gtttcatgtg
     2161 gattgaatac aaacttttga tctagcggaa ttttagagtc ttttttatca atacacgtcc
     2221 atgttttttc gttcgcatat acaggcaagc catactttct cgcaaggaca cctaagcctt
     2281 taatatggtc actatgttca tgtgtcacaa gaataccact aagatctgaa atttttcggt
     2341 cgatttgttc gaacagtgcc tccatttttt tacctgtgag tcctacatcg accaacaaac
     2401 tgcctttatc actttctaca tatgtcgcat tgccggtact accgcttgcg agtacactca
     2461 ttcgtatcaa gagaccaccc tttctattgt tcaataattt gtggattgga cgaaattgcc
     2521 tctacataat acgtatgtgt gccatttgcg tctttcactt taatttccca gttggcttgc
     2581 aaaacttgaa tattcgtctc tttgaccact gtataataac cgagtcggat gttttcgact
     2641 tcttgatcat gttttaagta ctgattataa taaagtgctt cgatagcttt atgggcacta
     2701 atgacttgtc taggttcatt attcgaccct ttagacggaa ggatgtcttc cattgctgac
     2761 tgctcatacg atttaactgt atcgtctttc acatcaaaag tcagttctgc acgattgtta
     2821 ttcataatcg gtaagccttt atacgtctgt tcgtatttaa ttttgccatc gctcgtatcg
     2881 tgatattgat actcattgcc tttatagata ttttgatcga tgtacggttt caaatgtgaa
     2941 atagggtcca atttcacatt gacactttca ctcatttctt tgtccaatgt gtgcccatta
     3001 tttcgtgctt ctgctttacc acttttttcc gcttcatctt taaagtcttt cgaacgtgcc
     3061 gtaatgagct gcattttgac atggctcaca tcaggcatat ttttcggcaa tttgatattt
     3121 tcttgttcaa agttgaccga attttgctgt tctgcatcgc taattttcga tttactaatt
     3181 ttatcattat acacaaaaat taaacaaata ttaacgagga gaaacacgac gatgaacaat
     3241 gattttgcac gtttccagtt catgtctcaa tcaactcccc gtctttatat tcgtaccact
     3301 cgtgatcata ttgaatatac cacgtcggta taaactggct gccttcttgt atttcgatac
     3361 tattttccgg tcctttaatt ggattcatgc gataaccgat aaccatttgt tggactttcg
     3421 taaaatcaat atcaccttta ctagccaata cagaacgcac gtcttccaaa tctggtaacg
     3481 actcaggttt ttcaccgtta tcaatcgtca cgttcgtttt taataaaccg cgactgtatt
     3541 catataaccc ccgttcgccc cataaaacac gaatttcgtt caattgattc ggataaaaga
     3601 taggacgtcc atttagaaac atttgataaa taatatggcc acggtcattg ttcgcactaa
     3661 ataagcgaaa atcatctgta aagccaccat gtttattaat aaaatcaaac gcacgtggca
     3721 agttgacatt catattccgc gtactatgct catcttctga caaattggta tagtcatacg
     3781 tttcacgatt cgcattgtag ttcacgacgc ctgtattgtt gttataggtc gtgttcccac
     3841 tattcgttgt acgcacaatt ggcgtattat caaacagaat tgcgttcaaa tcttctacgt
     3901 taatacgatt aaaaatagtc cgatatgctt ttaagttttt cggtgctttc acggcataca
     3961 tatacgtcgc cttattaatc gtactgcggt tcgtcacaac attggagtac ggttccaagt
     4021 ccgctttcat cttctgaatg cgctgttgta catatttcgt attcaaattc gtttctaact
     4081 taatcgcccg ttgatgattc ggctgcatgg cataaatgat cacatgttga gcatcatcga
     4141 catctaaaat cagtcggtta aatttaaaat ttgtcggtac tttcgcaggg atttcaatga
     4201 cttcattcaa atacatcgac aacgggatgt ctgacgggta gtctaacacg acgaaatgat
     4261 tgctcaaatt acgcaataac acgacatcgt cattttgaat atcttccact tcaataatgc
     4321 ggtgtttttg aaatacggtc attaatgcat tcacatcttt attcgctggc atacctttca
     4381 catcatcatt ttcgatatgc acgagctgca gaggcgtcac cacctggcta aacgctttat
     4441 cgtaacgcgt cccaattgcc tctgtcgcat ctttcgtatg cacattatct gcatccgtta
     4501 agtccggcga aaagttccaa atcatgactg tcaatacaat actcgatagg acgaggagcg
     4561 ctaacacaat tgacttaatc aattctctag ttcgcatccc aatcaccttc ctcaattttc
     4621 tcacaaggta atgtgatgaa aatggatgtg ccttgtcctt ccacactatt cgcccaaata
     4681 cggccgttat gcgcttctac aatttcttta gagatggcaa gacccagtcc tgtccctccc
     4741 atctttctcg tacgtgcctt atccacacgg aaaaagcggt caaaaatttt gtctacttta
     4801 ttaatcggaa tcccaatccc gttatcttta attcgaatcg ttaaacgact gtggacagga
     4861 ttatgtttca cgtggaactc gacacgtttc tcaccacgcg aatatttcat cgcattcgta
     4921 atgacgttgt cgaacacttg cgtcatctta tccggatcca cttctgtaaa tatcgtctct
     4981 ctcggaatat cacgcacgaa tgtcgtatct ttcgcagcca tttcatgtcg attaataatt
     5041 ttgttgatga acatattaaa gtcaacaatc tctttcgtaa tcgtttccgt ttcattatcc
     5101 attttagaca agtgtaacaa gtcattgacg agacgaatca tccgctctgt ctcttcacgc
     5161 gtcacggata aaaattgagg agcaatcgac tcatcacgcc aagcgccctc ttccaaagcc
     5221 tcaatataac tattcataga cgttaatggt gtccgtaatt catgcgagac attggccaca
     5281 aactcgcgac gttctcgttc aatttgttgt tgctcagtga catcatgtag cactgcaatg
     5341 taacctgtca caaagccagt atcttgcact atcgtactaa agttgacacg tgcaataata
     5401 ccttcttctt cattaatatc aatgaggaca ctatcattat tttcatttaa ttcttcaagt
     5461 gaaaactcat cttgtaaatc taatacatca aaaataaagt gcccggagac ttcctcttta
     5521 gacttcccta gcattttcag cgccatatcg ttaataatac gcacacggcc acgtctatct
     5581 gtcgcaatta ccccgtcact catatgggta atgaccgaat ctagacgccg cttctcactt
     5641 tccgtattcg cctgtgcttc ttgaacacgt ttcgacaagt tgttaaacgc gagtgccaat
     5701 tcaccaattt cgtcattacc ataaattttc acacgttgcg tatagttccc tttagacatc
     5761 tcgactgtct gatttcgcat atcagtaatc ggcttcgtaa tcgtacgcgc aataaagaaa
     5821 ccgagaatca ctgtaataat gagcgaaatc cctgtaccta cgatgaaaat ttggttaatg
     5881 ttgcttaact gatcgtacac ttggttaata ttcgactcga tataaatatc accaatcata
     5941 ccatcaccag tcactaccgg catattttta atccatacac gctgcttacc ttcaccgtaa
     6001 tcttttagca ctgtatccga attttcttgc cctagcgaca atgccttttg aatagaacta
     6061 tcattcgctt tttggttaat aatcgtacgg ttcgattgtt ttgatgtcgc aataatgatt
     6121 tgatctttat caataaagcg aatttctatc atttcattac gattggcata ttcattgagt
     6181 aaattttgaa tatctttttg tgtattacca gaatcattac catctgcata tattttttca
     6241 ataccgagct cgatttgttt cgcattttga gaaatgtttg tcttaaacgt ctcagtcatt
     6301 tctttttcaa ggctattcgt aaagtacaga ccaataattt gcataccaat aataatcaac
     6361 aggacataaa caataacaag tttcgtgtga agggattgaa attgttttaa ccacttcata
     6421 tttgccatcc tctaatcatg ttgttgtaag aaatatccaa caccacgacg cgtcacaata
     6481 tagtctggat gagaaggatc atcttcaatt ttttcacgta aacggcgaat cgtaacgtct
     6541 acagtacgga catcaccgaa ataatcataa ccccataccg tttggagtaa atgttcacgc
     6601 gtcatcactt gtcccatatg tttcgataaa taatggaaca actcaaattc acggtgcgtc
     6661 aaatcaatat cttcaccgcg ttttttaata gagtaagcat ctggataaat cacaatatct
     6721 ttaattgtaa tttcattcgt ctgcatgtga ttttcttgac tcggttgtgt ataatggcgg
     6781 cgtaagttag ctttcacacg tgcaattaat tcacgcgtac taaatggttt tgtcacatag
     6841 tcatccgcac caagctcaag accgaggact ttatcgatct ctgagtcttt agccgtcaac
     6901 ataataattg gcatttcgaa ttttttacgc acttcacggc acacttccat accgtcttgg
     6961 ccaggcaaca taatatcgag taacacgata tcaggttctt tttcatagat taagtcgacc
     7021 gcatcgttgc catcatatgc gacaaatact tcataacctt cttttttcaa attaaattct
     7081 aatatatccg caattggttt ttcatcatcg actacgacta cttttcttgc cataaaaatg
     7141 accccatttc ttaataagta cataatatcg gttgctaact ggcataatcc tataccttat
     7201 aatgtatcac taatataaag tgaattctat ctatttaacc cattttcatt tgtatcataa
     7261 tgggcaaaat ccaaccattc agtttatgta tctagctttt tattgacttt gagataaacg
     7321 gccaacaata tacctatgag cactatcgct tgtgtcacca tcgaagctac aaatagcaca
     7381 tcgttgtcta aaacaatgag cacgatatcc acgatacata ataggattga acataaagcc
     7441 gtataaccag aaattacctt cagttgatgg gcaaaggcga cttgagcaat ttcccaattc
     7501 ttttgatttt tcatcgactt cctagtccga aaaccaataa agtaattgat ttcttgaggt
     7561 gggttatgtt ggaacgtaat cgctaataag aataagaaca aacaacttga aaacagtatc
     7621 atttgcgtta ttcactcctt aatttagttg taccataatc ataaacaaac ggctacactc
     7681 acttttaaaa aaggtatagg cgcgctattg aggaacagaa aaatggggga tgacattgtc
     7741 attcattctc taaaaagcat aaaaaagact ctttacatgt cacctacgca acacgtaaag
     7801 agtcagttca cactagtgct taccaccaga tacgaaaatt gagagtaata atttaatgaa
     7861 ttcaataata gccttcacca ttaaaaacac ctcctctaca cactttcagt atatgcctgt
     7921 tgactgtaaa aagaggtatt ttgcctaaat tataattaac actgcatagc tgtcataaca
     7981 acgtattaca atcatcagtt aggcaagcct aactgtctta aaaacaaaaa agtgctcacc
     8041 ctattggatg agcacgttag cggtcccgac gggaatcgaa cccgcgatct cctgcgtgac
     8101 aggcaggcgt gttaaaccgc tccactacgg gaccatatca tggtgactcc tacgggactc
     8161 gaacccgtgt taccgccgtg aaagggcggt gtcttaaccg cttgaccaag gagcctttct
     8221 taaacacaag aatgattata gcatcaccca atcgggttga caagattttt ttcggatttt
     8281 tttgtataat ttttcatata aagttgttca gggggtcatt tatggaaatt caagcagaat
     8341 cgaacgttgc ttacatcaaa gagaaaccta aaaagccacg tcaatttttc aagagatttt
     8401 tctttattac gttaggcgca gtgttgatgg gagtggcact ggagcttttc ttagtaccga
     8461 atcaattgct cgatggaggc attgtaggta tttcaattat tctgtcccat ttattaggat
     8521 tcaaattagg gatattcatc tttatactta atttgccttt cttcttttta ggctataaac
     8581 aaattggtaa aacttttgca atctctactt tgtatgccat ctctatctta tccgttacga
     8641 ctattgtgtt acaccctatc gatccagtca ttaacgataa atttttagtt acgatttttg
     8701 gcggtgcagt cctaggtatt ggtgtcggca ttgtgctacg ttatggtggc tcattagacg
     8761 gtacagagat tttatcgatt ctcgttcact caaaattgcc tttttctgtg ggcgaaattg
     8821 tgatgtttat taatttcttc atatttggca ttgctggctt tgtgttcaca tgggagagtg
     8881 cattatttag tgttgttgct tatttcatcg cctcaaaaat gattgatacc gtccttttag
     8941 gttttgatga atccaaagcg gtatgggtta ttagtgatgc ctataaagat attggtgaag
     9001 caatcaattc tcgtctcggt cgtggtgtga cgtatttgaa aggtgaaggc gcgtatactg
     9061 gagaagataa acgtgtcatt ttctgcgtga ttacacgtct tgaagaagca aaattgaaag
     9121 atatcgttat ggaaatcgac gaaaaagcct tcctctcaat cggtaacgtt tcagaagtac
     9181 gcggtggaaa ccatcgtaaa agagatattc attagtgatg tcatattggt tcctcttttt
     9241 aggatgcacg atgttgttgt gtaaagccat gcaagtattt tgtgttatcc aacacacata
     9301 ctgaaaataa aacaacatta aagataaatc attataggcc aataaaaaag accaccaaat
     9361 cattttggca gtctttttta ttttaggtca gtcttaccga agcgttgccg gaagactccc
     9421 ctcagttatt gtattaccat aatttttcta caacatttgt ttgattacga tctggaccta
     9481 cagagaagat agaaatgtgt acgttacaca attcagaaat acgctctaag taacgacgtg
     9541 cattgtcagg caattcttcc attgtacgta cgcctgtaat atcttctgtc caacctggta
     9601 atgtttcaaa aataggttcg caacgtttta agtcgtttaa gttcgctgga tattctgtga
     9661 tttctttacc atctaactca taagctgtac agattttcac ttcatctaag cctgttaata
     9721 cgtcgataga gttaatagat aagtcagtaa tcccactcac acgacgagag tgacgtaaca
     9781 ccactgagtc aaaccagccg acacgacgcg gacgacctgt tgttgtacca tattcgcgac
     9841 ctacttcacg gatatgatga cctttttcgt caaataattc tgttgggaac gggccatcac
     9901 ctacacgtga cgtatacgct ttacatacac cgacaacttt tgaaacgttt gttgggccga
     9961 cacccgcgcc tacagtgacg ttacctgcga caggattgct tgatgtaacg aaaggatatg
    10021 tgccgtggtc gatatctaac atcacacctt gtgcaccttc aaataataca cgttcatctg
    10081 ctacgaaagc atcgtctaac acttttgcag tatctgtgac gtatggtgca agacgttgac
    10141 cagctgcata gtatgtttca aaaatgtctt caaatgatgg tgcatcttgt ttaaacatac
    10201 cttggaagta atcattttta tattctaaat tttcttttaa gcgttgttcg aaaacttctt
    10261 tgtctaataa atctgctaca cgaataccca ttctttgtgc tttatctacg tatgctgggc
    10321 caataccttt cttcgtcgta ccaattttgt tgtcgccacg acgcgcttct tcaagttcat
    10381 cttgttgaat gtgataaggt aggatgacgt gtgcgcggtt tgagatgcgt aagttatctg
    10441 ttgcaatgcc tctttcattt aagccgtcta attctttaag taatgcaact ggatcaatca
    10501 cgacaccatt gccgatgaca gcaagtttgt ctttataaaa aataccagat ggcactaaat
    10561 gcaatttgta agtttcaccg tcaaatttga ttgtatgacc tgcattatta ccaccagaaa
    10621 aacgtgcaat gacatctgct tgttccgcta aaaagtctgt aattttacct ttaccttcgt
    10681 ctccccattg tgtcccaact actacgattg atgacataag agcacctcca agttttctca
    10741 attaaccaaa ctgtattcta ccagtatcac atcatgaatg caaatcaaaa aacgaacatt
    10801 gaaaattaga ttgtgcgtca caccattcaa gcccctctaa aatagtcgga cccttacaac
    10861 cacgtgttat acaagtgtta ttaggctctt tcgcttgtgt ccaaaatcct aacttacatc
    10921 aaaatcgata agttaataca aagtaaaaac cgtacattaa acagaatttg ttatataata
    10981 tacgtatttt aagtttaaaa ttattttttc ttttcggttg ttccatgcaa tatcacaaat
    11041 aaaacggttg atgattgata acaccaaccg ttccaagcac acgtccaatt atcccatatc
    11101 cgcatgagca taatcgatat ctgtaaactt attatattgt ttcataaagt gtagcttcac
    11161 tgtaccggtc gggccgttac gctgcttcgc gataatgatt tcaatttcac cattttcatc
    11221 atttgtttgt ggttcgaatc caccatcatc gtcatcatca tctccatcgc cacggttata
    11281 gtagtcatca cgatataaga aagcaacgat atcggcgtct tgctcaatcg aacctgactc
    11341 acgaatatca ctcatcatcg gacgtttatc ttgtcgttgt tcaacaccac gtgatagctg
    11401 acttaacgca atcaccggac actctaactc acgggcaatc gctttaagca tacgtgaaat
    11461 ctctgacact tcttgttgac ggttatccga tgcacgtgaa ccacttcctt gaatcaattg
    11521 taagtagtca atcacaatca tatccagtcc atgttcttgc tttaaacgac gacattttga
    11581 acgaatatcg gtaatccgca cacctggtgt atcatcaata aaaattttcg tccgagacag
    11641 tttaccgact gccactgtaa atcgattcca atcctcctca gtcatcgtcc ccgtacgtaa
    11701 acggttcgaa tcgacattgc ccgaactaca aatcatacgt gtcgccaatt ggtctgcacc
    11761 catctctaat gagaaaatgc cgaccgtata ttgatcttca tgtgtggcta ctttttgcgc
    11821 aatattaaga gcgaaggcag tcttacctac tgaaggtcgc gccgctaaaa taatcaaatc
    11881 attacgatta aagcctgctg tcatctggtc taaatcgcgg taacctgtcg gaatgcctgg
    11941 cgtttgacca ctattctgat ccaattgttc cgcattatca taaacttgtc ctaatacgtc
    12001 acgaatatct ttaaaaccgt cactctcacg tgtagaagac agttccaaga tacgacgttc
    12061 tgcatcattc agcacggtat ctaaatctaa ttcatcgtta tagccatcat tcgcaatact
    12121 atccgcagtg tgaatgagct tacgtttgac tgcatttttg aacaccacgt ctgtgtagta
    12181 ttgaatattt cgcgttgtcg gtacattcga tgtaatttca gcaagatatt ggggacctcc
    12241 cgcttcattc acgacccctt cttgtgtgag tcgatccaaa acagtcacaa tgtcaatatc
    12301 tttaccatct tcattcaggt ccatcatcgc acggaaaata tgctgatgcg caccacgata
    12361 aaatgattca ggcaacaaaa tttcttgcgt ggacgacatc aattctgggt cgagaaaaat
    12421 cgcccccagt acagattgtt ccgcctcatg actgtgtggc attcgattat gttcatacat
    12481 ttcatccatg ccaatgacct cctcactttc atgacatata cttaacatat tctataataa
    12541 cctaaaccga atcacaatac atgattcagc atgttcaaaa atgtaaattg ctgatatacg
    12601 cacatgtctt aaaattcatg aatttaacat acacatcata cgctttatga cttccttttc
    12661 tttatcaaat ataagatgta aatcaccaca gttgataaac caatagaaga tagcatcaca
    12721 atgataagtg acatgattat ttcaaaaaga ctgtctttag gtaaaactct gataatgaag
    12781 gacattggaa tcatagagat gatataaacc cacacatatc tttttaattc tttagatata
    12841 ttctccattt tatcaattcc tttttaaacc gcttttactc tatagtatta caaatgatgt
    12901 atgaaaaaag ccggtgacct ctgcaccagc tttcttcaca accctatcat tattgctcta
    12961 cagtatgcac acgaatcgta ccttctacct ctttatgcag tttcacaggc acattcgtat
    13021 aacctaacgc gtgaataccg tgtggcaatt ccattttacg tttatcgatt ttaatatcat
    13081 gttgcgcttt caatgcttca gcgatttgtt tcgtactaat agaaccgaac aatttaccgc
    13141 cttcacccga tttcgctttc acttcaactt caagcgctgc taaacgttct tttaacgctt
    13201 ttgcatcttc aagctcttgt tgtttgtctt tttcaatacg tttatttttt tgttctaatt
    13261 gtttcaagtt ccctggtgtt gcttcaacag cataaccatt tttgattaag aagttgttcg
    13321 cataaccgac tggcacgtct ttaacttcac cttgtttccc tttaccttta acatcttgtg
    13381 taaaaatcac tttcatgatt cgtcactcct atccaattgt tcattaatcg cttgttgtaa
    13441 cttttcgata gccgcttcaa cagtcacgcc ctctagttgc gttgcagcgt ttgtgagatg
    13501 accgccacca cccaacgctt ccatagtgag ttggacgttg aattcgccaa gtgaacgggc
    13561 agacatacca atgagatttt cttcacgacg cgcaacgaca tacgccgctt ccacgccatc
    13621 aagactcaac aactcatctg ctgcttgggc tacggtcaca ggatgataga ttttgtcatc
    13681 cggaccatgt gcgattgcga taccattctc ttgtaatttc accgtacgaa tcaactctga
    13741 acggttaata tacgtctcaa tatcatcttt taagaaatgt tgcgttaaga ttgtatcggc
    13801 tccatgcgca cggagataac ttgctgcatc aaatgtacgc gagcctgtac gcaatgtaaa
    13861 gttacgtgta tcaacgatga tacctgcata catcacagtc gattctaagc gtgttaagcg
    13921 ttgttcagtc ggttgatact cgagtagctc tgtgacaagt tctgcggtag agcttgcata
    13981 tggctccatg tagacgagta acggacttga gataaagctt tcgccacgac ggtgatgatc
    14041 aatgaccact ttacgattgg ctttatttaa aatgttctcg tcaatgacca tttccggttt
    14101 atgcgtatca acgacgacaa gtgttgtacg agatgtcatc atattccatg catcatcgga
    14161 cgtcacaaag cgctccttca attcaggctt ttcatcgatt tcatccatca cacgacgtaa
    14221 tgtagggtcg atgtcagact catttaacac gatatacgct tccaagttgt tcatcatcgc
    14281 aaatcgggtc acaccaatcg ccgcaccaat cgcatctaag tctgggcgtt tatgtcccat
    14341 cacgatgact ttgtcgcctt ctaataggat atctttcaac gcatgggaaa tgacacgcgc
    14401 tctcacacga gtacgttttt ccatcgggtc agtcttaccg ccataaaaac ggacgttgcc
    14461 attcatattt ttaatcgcaa cttggtcacc accacgacct aacgcgagat caagaccaga
    14521 ttgtgacaat tcacccaggt caattaagtt ttctgagcct tcaccgacac cgatacttaa
    14581 agtgagttgt gcgcgataac cgacactttt ttcacgaagc tggcttaaaa tatcaaactt
    14641 tgtctcttct aattcacgta aaatacgacg attcaaataa gcaataaatt gatcggaact
    14701 ataacgcttg aaatacacat tatgttcttg tgcccaacga ctaatgacac gtgtcaccat
    14761 cgagttgatt tcagaacgtt gtgtatcgtt catattttgt gtaatttcgt catagttatc
    14821 taaaaataat gtcgcaataa tcggctgttg atcatcgtac gcttgttgga tggtggcttc
    14881 ttccgtcata tctataaaat acaaaatatg ttctttttct gaataacgga cacgataggc
    14941 atacgcacca tctgctattt cgatttcttt cgccttttcg agttgcttta aaatattcgg
    15001 gtacacttca ttgattggat ctgaaatgac attcctttca atccgctctg acatgaaagg
    15061 gttgacccac tcaatttggt cattttcatt taacacaatc aaacctagtg gcattgtttt
    15121 gactgcacga tcactaccta ttgatatttt gccactcaaa tcatctaaat aacgatctaa
    15181 ataacgatag aaacgtctaa aaatgaagac actgataatg agcatgacaa ataacaggat
    15241 agcagcgata aacgcaagcc actgattaaa gaaaaaggat agacctacaa tgatgattgc
    15301 tgtaacggta atcactaaaa aaggtacgat caacgctttc ttcattgaat gacgattcat
    15361 cttgtcacct cttatcgttt tttatcatac gttttaaatt caaccccaaa tcgagtaaac
    15421 caatgaggcg tgtcattgga taaaatagta caccgacaat cactaaaatc actcttaacg
    15481 cgccgggcat tcttttaata gatgcaaaga aatgaataaa acttaaacct tgaatcacta
    15541 ataagaaacc taaaacgatt tggaaattaa tgccaatgct gttcggtgta gtggcaggtt
    15601 gtgttgtaat cgttgttaat aatgccaatg catacataat gaaaactgaa cgcttcattt
    15661 gccagaaaaa tagtgggcga aatacaggtg ttgccacttt gaacttacgt aaaatcggga
    15721 aaatgatgag caatgtaatg aacacgtaaa tagcaatcgc tactacaatc atccccggca
    15781 actgtattgc gagttgttga atcgaattgt ttaaaatctc ttgagcttgt tgatctaaat
    15841 tttctaactc tgcagcttga tgcattattg cacgatacgg ttgcaataag tcgtcagcat
    15901 acgggatttt tttcaaagtt tgtaaaatca tcatcgcact taatgttaaa acacttgcca
    15961 cgaatgtcgt taaatataag atgcgctctt tagatgcacg ttggattaat aactgactga
    16021 tgaccatact taaaactaaa ataatgatta aaaatgtcat cacaaaaacg ttgcctgtga
    16081 gcgttgagag aataatcgca ataagtgcga ctaagccaaa cgaatgctta gattggtacc
    16141 ataaaacgat acctgggatg aaactaaagc atgccaaaat gattgctaat ccaggcataa
    16201 catgtataac taaagtcacc actaacaacg ccacaatgct gattagggtt gctttaggat
    16261 taattttcga aaacaaagac gccacttcca aactattata gtctataaat tctattttac
    16321 aggctttgta atatgaatac aatttgcgcc acatgatttc acgcgtctta caattgaatt
    16381 acaaaacgtc actttcttga acacattaga aaagctatat tttagctatt atccctaaaa
    16441 tatagcttct tgtctagtat tcttagttga cgtaattata acaaaaatgt aacgttttcg
    16501 tctaaagtta gcgtctaaat cgtgaaactt ttaggaaatg atacaggtac ggcgcccaat
    16561 cattaaaatt caataaaaag ccatcatgtc ctacattatc aggcacaaag aaatggcgat
    16621 gatatttgaa ataacagcct aacgcagcga cttggtcatc tggatacagc aagtcatctg
    16681 taaagccgag cgtgagaact ttcgtgtcta atgattggaa tacgtttgcg acatcatctc
    16741 taccatggtg aatgtcatga ctgtctaaca catcaagaag tgttaaataa cattgcaaat
    16801 caaactgttc tttaaattta tcgccttggt gcttttgata taacacgact tcatcaggtg
    16861 tgaagcgggc gtcataactt ttagaggacc ggtacgttaa aaagccgagt tgccgcgcga
    16921 tacttaatcc ttcttctccc gctaaatgga tggcttgtct cgctatttca ttaaacgccc
    16981 gactataaga agatgtcttt tcagtagctg ctaaaatgac tgcctttttc acttcgaact
    17041 tttgattgta gaggagctcc attacttgca tgccacctaa agagcctccg atgagaatgt
    17101 ctattttttg atgaccgagt gcttcaatgc ctttttcgag agcacgcaca atatctcgca
    17161 aggtgagttt ttgtgggaag ttgggatctg ttaaacgaga actcgaccca aacggactac
    17221 caatgacatt aaatgtcaaa aactggtaat catgaactgg catgtacccc ccatcaataa
    17281 tctctcgcca ccaccctgga ttgtcttctg tcccataagt gagatggtta cctgtcaacg
    17341 catgacatac gacgacgagt ggctggccag gataacctac atattcatac tgaagcttca
    17401 aattttcaat cgtttcacct gattctgtcg taaatgcacc taatgctaat gtgtccacgc
    17461 gataattcac catttcagtc taccctccct ctaaaaatta aaaaagttgt acaacctttg
    17521 acggctatac aacgtttata agtcagtttt taaatgaact tatcatccac ataacgtggt
    17581 tggttgtagc accgtactta taacgataag tggttgctga agtgtcactg ggccaaatcc
    17641 ctcaacttct cttaataagc ttatttttaa taaagttatg ttgtgtcttt aatcataccg
    17701 caaacctatc acgtatgcaa atgattgtta gaataatccg ataattctca acagtgccac
    17761 actcaccata ccgacaatga ctgttatcgt taaacgtctc gtccaaaaag caatgataag
    17821 cgtcggaatg agcgcgatga taaagtgcca attcaatgta taacccatca tgccttcttg
    17881 ttgctgaatg aacccatcga ccactaatgc agtaaataat gtaatcggaa taaacgtcag
    17941 ccacttaagc accttgtcag acagttccat acgtgaaatc atgacaaaag gtgtgattct
    18001 gatgagtaaa gtcccaagtc ctgctaaaaa aatcgtccaa aatacgtaca tgctcatcgg
    18061 tcaatcacca tccctatcgt cgcacttaaa gtcgatgcaa gtaaaattgc taaatacgaa
    18121 ggtaaaaaca aactgagtag taacatcata acaatgacga ttgcaactaa atagagatac
    18181 acacgtaatt tcgatttcgt aatgccctca aattgtgaaa ttgctaaaaa gataaacatc
    18241 gcagtgatcg cgtagtccaa gccaaatact tctggatgtt ggaaaaagtc acctaacaat
    18301 ccaccgagca cagtaaccaa tgcccaaaat aagtaggcca gtagatttaa tccatacaac
    18361 cactgatatg tcatcgtatg tcctttcgaa taaggcgtga ttgcaacagc aaatgtttca
    18421 tccgtcaata aagaccctac ccctacccta tgtatgaaat gatcatgttt gaaattcggc
    18481 gccaatgtca tgcttaataa aaacatacgg ctattgacaa tcatcgcagt gagcacaatg
    18541 acccagatcg gcgtttgtac ggcaatgagc gcaataataa taaattgtgc tgcccctgca
    18601 taaacgagta atgagagcag taatatttct aaaatgttga atcctgatgc gacactcaca
    18661 attccaaatg aaaagcctac cccagcatag cctagtacag tagggagaca atcacggatg
    18721 ccttgtttaa atgtagtgta aggcattgag actcccccct tgaaaattat tcttattata
    18781 gtacaacata taccatctcg ctacaaagtc agtctcacct catttatccc tcagtctaac
    18841 ctaccgtata aaaacgttga tattaaggtt tttatgtcaa ttttagaata ttgagataat
    18901 aattgatgag gtgcgtctta ttttgttatt ttgattactt tttaccctcc cctaccctct
    18961 tcacatgcta aaaaaacagg aggtcgtata ttaaaaatac gagctcctga tttgatttca
    19021 gctattctat attgggttgt ttgtaacgtc cattttatct taaagcggtt tgataactgt
    19081 ttgaccaccc atgaatggga ctaacgcttc aggcactgta atcgtaccat cttcattttg
    19141 atagttctct acaatcgccg caaatgtacg acctactgct aaacctgaac catttaacgt
    19201 atgtgcatat tcaggtttgg catctttatc acgtttgaaa cggatattgg cacgacgcgc
    19261 ttggaaatct acacagtttg aacatgaact aatttcttta tagtcactgt agcttggtaa
    19321 ccatacttct aagtcatatg ttttacttgc accgaaacca atatcgcctg tacataaaat
    19381 cacacgacgg tatggtaagt tcaatgcttc gagaatcgct tctgcatttg atgtcatttc
    19441 ttctaaagca tcccaagaat cttcaggttt ttcaatacgc accatttcaa ctttattgaa
    19501 ttggtgcaga cggattaagc cacgtgtatc acggccagct gatcccgctt cacttctgaa
    19561 acatgctgat tgacctgtaa acttagctgg taagaccccc ggctgtacaa tttcgtctct
    19621 atagtagttt gtcaaaggca cttcagcagt tggaattgtg tataagcctt ctttttctac
    19681 tttaaacaaa tcttcttcaa atttaggtaa ttgacctgta ccgtacatcg ctttagcatt
    19741 cactaactgt ggtaccatca tttcgcgata accgtgttgt gtcgtatgca tcgtaatcat
    19801 aaagttcatt aatgcacgct ctaatttagc accgtcattc gttaaataaa cgaaacgtgc
    19861 accagacaca cgtgcggcac gatcaaagtc tgccatttct agtgattcta ctaagtccca
    19921 gtgcgctttt gcttcaaagt cgaactcacg tggtgttccc catcttttaa gttctacgtt
    19981 atcagaatca tcttcacctt caggcacatc atcgtgaata aggtttggaa tacgtgataa
    20041 gatgtcattt aatttcgtat ccgcttcttt taactgtgca tcgatatttt taattttttc
    20101 tcctacttca cgttgcgctt taatcgcatc atccgcattt tctttattac gtttcttttc
    20161 agcaatttgt tgagaagctt tgttacgttc tgcttttaat tcttcagttt gttgtatgta
    20221 atcacggcgt tgttggtcta acgctaacac ttcatctaca actgatggat ccatttgacg
    20281 taacgcaatt ttcttcttaa ctctctctgg ctcatttcta aataatttaa tgtctaacat
    20341 aagtcgactt cctttcataa agtaatttaa aaatttaagg aggatgactc aaaataaaaa
    20401 accacatccc tcacacaagg gacgtggttt gacgtgttgc caccctattt aacagacaga
    20461 atatgcctgc actctcacaa aagttaacgg tttcacccga attgttttca aaacgtgggt
    20521 agatttcgta taggtctgta catttgtttt caccgaccac aaactctcta attccattgc
    20581 tatactactt aatccacaaa caattattta tttcgatttc acatttaata taacaaagaa
    20641 aatttcgaat agcaagctta tttctgatac gccagattct ttaaatattt cgccacattt
    20701 tcaatatctt gatgaaatgg tcggtcttct tgaatcgatg gcacgatttt acgcaatgct
    20761 tcatactgtt cacgtgtttt gggtgacaat tgttcaaccc ctcttatttc gactgcttgt
    20821 gacgcaataa tcgcttcaat cgcaatgacg cgtcgtgtat tttctaaaat ttgatagccg
    20881 tggcgtgacg caatcgtccc cattgatacg tggtcctctt gattggcgga tgaaggaatc
    20941 gaatcaacac tcgccggatg cgccaatgtt ttattttctg atacaagact cgctgccgca
    21001 tactgcataa tcatcgcacc actttgcaaa cctggttctg gacttaaaaa agcagggaga
    21061 cccccattga gttgcggatt gactaaacgt tcaagacgac gttccgcaac gtttgccaat
    21121 tcacttgtcc caagctttaa gaaatccaaa gcgaatgcga caggttgacc gtggaagtta
    21181 ccgccagaaa tgaccaatgt cttatcacct tcattaaaaa taagcggatt atcatttgct
    21241 gcgttcattt caaattctaa cttttcacga acgtattgaa acacttggaa gcttgcacca
    21301 tggatttgtg gaatacaacg caatgtataa gggtcttgaa cacgcatttc cccttgacgt
    21361 gtcgtgagtt tggatccttc aagccagtct gacatccgtc ttgctacagc tgtctgttct
    21421 tcaaagttac gcacttggtg aaccgcttca tgataagcat ctgtaatacc atgtaacgct
    21481 tgatgtgtta acgcggcaat ccattctgct tggtatgcca aattttcagt ttctatccat
    21541 gaaatgaccc cttgtgctgt catcgcctgt gtaccattaa tcagtgccaa tccttctttc
    21601 gcttgtaacg ttaaaggctt acggttcaac tgttttaaga cctctgagct atctaaaact
    21661 tcaccttggt attcaacttt accttcacca attaacgcta aggcaaggtg tgacaatggc
    21721 gctaaatcac ccgaagcacc gagagaacct tgttgtggga taacaggaat gatacgttga
    21781 ttgatgaaaa acaccaattg atccactaat tccatcgtca cgcctgaatg ccctttcagt
    21841 aaagtattta aacgtaaaat catcatcacg agcgaaacat tcgatgcaaa aggtgcaccg
    21901 ataccacacg catgtgaacg tattaaattg acttgtaatt gattatactt ctgttgatca
    21961 atcagtacat cgctaaacaa accaaatcct gttgtaatcc catacacggt ctctttattg
    22021 gcaataatcc gttccacaat cgcacgactt ctttccacgc gcacctgtgc ttcctcagtc
    22081 acttttactt tatcctcata tgctaaaaac tgtcgtatag cctcaatcgt cagctgctcg
    22141 cctgttaaac gtaatgtcat tgtaatcctc ccatctcctt catcacgtga cacacaaaat
    22201 gtctatttct ttcaagtata gttttaggat atcgttttca caatactttc agccaaactc
    22261 gtaatatggt atcaaattaa ccttttaacg tactaaatga actcacttaa acaaatatcg
    22321 aaatttaagt tactttttca aaaaaataaa agggctacaa aataggggaa catgcatagt
    22381 cgctcacgtt tgcgtagcgc tatcacaaag ggtcacattg aaaccttaga atgcctattg
    22441 acgaacgagc aaaccaggta taatatatct tgttgtaata atggaaattc cagataggag
    22501 gtctcaaacg tgaaaacatt gtcagctgtt cacattccta aacgtaagga tgacacacat
    22561 aaaggtgact atggacgtat tctgttaatt gggggcaatg ccaatttagg tggcgcaatc
    22621 atgttagcag cacgcgcttg tgtatacagc ggaagtggct taattacagt cgcaacgcat
    22681 ccaacaaatc atgtcgcatt acattctcgt tgtcctgaag caatggtcat tgacatcaac
    22741 gatacgaaaa aactaacgaa aatgattgaa gcttctgatt gtattttaat cggaccaggt
    22801 ttagggttag attttaaagg taacaatgca atgacatttt tactgcaaaa tattcaaccc
    22861 caccacactt taattgtgga tggtgatgcg atttcaatcg taagcaagct taaacctgaa
    22921 attccagctt gcaatgtcat ttacacacca catcaaaaag agtgggagcg tttgagcggc
    22981 attccgattg aggaacaaac atatgaaaca aaccgtgcag cagttgatcg attaggtggt
    23041 acggtcgtgc tcaaaaaaca cggtacagaa atatactttg aaaatgacgc atacaagctt
    23101 gaagtcggta gcccagcgat ggcaacaggc ggcatgggtg atacacttgc cggcatgatt
    23161 acaagctttg taggacaatt tgacaacgtg attgatgcaa ttacaagtgc aacttatacg
    23221 cacagttata ttggcgataa gttgtcaaag gatatgtatg tcgtaccccc atcaaaaatt
    23281 attgatgaaa ttccttatgc gatgaagcaa ttagaggaaa aataatattt tacaaatcgt
    23341 aggaagaaag actcggaaac ttcaatgtga tccgagtcta tttcttttaa taaggaaatc
    23401 gattggttat tcatgcttct actacacatg tacaattcaa acaaagcggt ggctagttaa
    23461 aatgctaccc ctgggaacgc gccgcatggt tcagcaatct aacggtaaca aggtaactaa
    23521 agaaaaagac gatgatctct aaatgatgag accatcgcct tttcaattta taggttattc
    23581 atcttcattt tcaatatctt cattcacgcg atccataaag tcttctctca atgtttcacg
    23641 ttctggtgat acttctggtt ctggggcttc cgtgtgaatc gtatcgccag gagtcacatc
    23701 atcgacaaca acttctacat catcacttgc ctctgatgcg gttgtatgtt catccgcttc
    23761 gatgtcttct ggctctttct tcacttttgc cactgtcgac acatattgtt cttcatctaa
    23821 tcgaatgaga cgcacacctt gcgccatacg accattgaca gaaatattag agacttccat
    23881 acgaatgatc acaccctggt ttgtcacaac cattaaatct tcgtcgcctt ctacagttgt
    23941 aatacatacg agtcgaccat ttcgttctgt cagtttcgct gttttcacac ccataccgcc
    24001 acggttagac agacgatagt cttctatcga tgtacgttta ccgtaacctt tttctgtcac
    24061 gactagaatt ttatcttgat tgtcatcgtc tgcaacgtct aaaccaatga cttcatcacc
    24121 gtctcttaaa cggatccctt tcacccctgc agcaatacgg ctcatcgcac gtacgtctgc
    24181 ttctttaaaa cgaatgagtg acgcttgggc tgtaccgata agaatatgtt tctcgccatc
    24241 tgttagacgc acggcaatca gttcatcatc atcacggaat ttgatagcaa ttttaccgtt
    24301 acgattaata cggttgaaat tgcttaatgc tgaacgttta attaaacctt ttttcgttac
    24361 gaatacgagg aagtcttctt cagagtctag gtctttcacc gcaatcatcg tactaatcac
    24421 ttcatcttga tcgagttcaa tcacattaac aattggaatc cctttagact gacgggagag
    24481 ttccggcact tcataacctt tcagtttgta gacacgtcct ttgtttgtaa agaacaacac
    24541 ttgatcatgc gtgcttgtcg tcactaactg acttacgaaa tcgtcatcaa gtgtattcat
    24601 gccttgtacg cctcgaccgc cacgattttg cgcacggtat gttgaagcag gtaaacgttt
    24661 aatgtagttg ttatgactca atgtgataac gatttgctct tctgggatta aatcttcatc
    24721 ttctaattga tcaataccac cgagttgaat ttcagtacga cgatcgtcgc caaacttctc
    24781 tttaatctca gtcaattctt cacgtacaag ttctaatagc ttttcttcat ccgctaaaat
    24841 cgcttctaat tcagcaatat acgcaattaa atcattatat tcttgttcaa ttttgtcgcg
    24901 ttctaagcct gtcagacgtc ttaaacgcat gtctaaaatc gcttgtgctt ggcgttctga
    24961 aagggcaaag cgtgactgta aactttccat tgctacttta tctgtctctg attcacgaat
    25021 gattgtaatg atttcatcaa tgtgatccag tgcaattctt aggccttcaa gaatgtgtgc
    25081 gcggtctttc gctttacgca aattgtattc cgtacgacga cgtacaactt ctttttgatg
    25141 ctctaagtaa tgataaaggg cttgcttcaa gttaatcaat tgagggcgtc cattgactaa
    25201 agcaatcatg ttcaccccaa atgatgtttg aagtggtgtt tgtttatata aattatttaa
    25261 aatgacgctc gcattcgcat ctttacgcac atcaatcacg acacgcacac ctgtacgtaa
    25321 actcgtttca tcacgtaaat ccgtaatgcc atcgattttt ttatcacgaa ctaattccgc
    25381 aattttttca atcatacgtg ctttattgac ttgaaatgga atttctgtca cgacaatacg
    25441 atcacgaccg ccaccacgag attcaatttc agctttagct ctcataatga cagaaccgcg
    25501 acctgtttcg tatgcgcgtc gaatcccact tttaccaaga attaatccgg cagttgggaa
    25561 gtctgggcct tgaatgtctt ccatcaattc actaatcgta atgtctggat tatgacttag
    25621 actcagtacg ccatcgatca cttcacgcat gttgtgtggt gggatattgg tcgccatccc
    25681 aaccgcgata cctgaggcac cattgacgag caaattaggg aaacgcgatg gcaagacgct
    25741 cggttcacgc tcattaccgt catagttgtc gataaaatca atcgtgtctt tattgatgtc
    25801 gcgtaataat tctagtgcaa gctttgtcat acgtgcttct gtataacgca ttgccgcggc
    25861 accatcacca tccatcgaac cgaagttacc ttgaccatct acaagtggat aacgatagct
    25921 gaaatcttgt gccatacgta ccattgcttc ataaattgac aagtcaccat gtggatggta
    25981 tttccccatg acatccccta cgatacgggc agatttttta tacggcttgt caggggtcat
    26041 cccttgttca ttgaggccat acaaaatacg acgatgtaca ggttttagac catctcttac
    26101 gtctggcaaa gcacgagata cgataacact catcgcgtag tctaaaaacg attcgcgcat
    26161 ctctttgctg atattacgtt cattaattct tgattcaggt gtttcagcca tcaagatatc
    26221 ctccttctca ttttccaatt ctcattctag aaatccaggt tcgcatatac ggcgttatct
    26281 tcaatgaact gacgacgatt ttcaacgaca tcgcccatca acatttcaaa agtttggtct
    26341 gcttcaatcg catcatccaa cgtcacttgc aacatcgcac ggttttctgg attcattgtt
    26401 gtctcccata actgatccgc attcatctca cctaaacctt tatagcgtgc aatagaccat
    26461 tttggcgtag gattcagttt ttcttttaat ttatcgagct cacggtcatt aaacacataa
    26521 tacttttgct taccttgcgt cagtttatac aacggtggtt gtgcaatata cacgtaaccc
    26581 gcttcaatca acggacgcat aaagcgatag aagaacgtga gtaacaacgt acgaatatgc
    26641 gcaccatcga catccgcatc ggtcataatg acaatcttat ggtagcgtgc ttttgaaata
    26701 tcgaattcgc cgccaatgcc agtaccaaat gccgttacca tttgacgaat ttcattgttg
    26761 tttaaaattt tatctaagcg tgctttttca acgtttaaaa ttttaccacg caacggtaaa
    26821 atcgcttgtg tacgtgagtc acggcctgat tttgtagacc ccccggcaga gtcaccctct
    26881 actaagaaaa tctcactttc agacggatct ttactcgaac agtcagctaa tttacctggc
    26941 aaacttgaaa tgtccaaagc agatttacgg cgcgtgactt cacgtgcttt tttagcagca
    27001 atacgtgcgc gcgatgccat aatccctttt tctacaatga tgcgtgccac ctgtggatgt
    27061 tcatataaaa agcgctcaaa aagctctgag aagacacggt caacaatttg acggacttca
    27121 gagttaccta attttgtttt cgtttgacct tcgaattgtg gatcaccatg tttaatcgac
    27181 acgaccgctg ttaagccttc gcgtgtatct tcacctgata aacgatcctt atcttcttta
    27241 atcaacttgc tttgtgtacc ataattgttc aacactcttg tcaatgcacg tttaaagccg
    27301 tcttcgtgcg tcccaccttc atacgtgtga atgttattcg catatgtcag tagatttgtt
    27361 gcaaaaccac tgttgtattg tagtgcgatt tccacttcaa tatcgtcacg tgtttgatga
    27421 acataaatcg gctcatcatg taaaggctct ttattttcgt ttataagctc cacatacgac
    27481 ttaattccac cttcatagtg ataactatcc tcacgcacat tttcttcgtc acgttcgtct
    27541 gtgagcgtaa tacggatgcc tttatttaaa aatgccaatt cacgtatacg tttttgtaat
    27601 gtttcatagt tataaactgt tgtctcttgg aaaatcgtgc cgtccgcttt gaaacggatg
    27661 actgttcctg tttgatctgt atcgcctact tgttttaaat caaaggcagg gacgccttta
    27721 tggtacgctt gatgatgaat acgaccatct ctgtgcacat aaacctctaa tgtgtcactt
    27781 aaggcgttta ctactgatga gcccacacca tgtaaaccac ctgaaacttt gtatccaccg
    27841 ccgccgaact taccaccagc gtgtaatact gttaaaataa cttcaactgc aggacgtccc
    27901 attttttctt gaatatcaac aggaatccca cgcccattat ccgtaacttt aatccaatta
    27961 tccttctcaa tgactacttc tatgttatca gcatatcctg caagtgcttc gtcaatactg
    28021 ttatcgacaa tttcccaaac gagatgatgc agaccgcgtt ctgaagttga accaatatac
    28081 atacctggtc gcttacgtac cgcttcaaga ccttccaata cttgaatctg acttgcgcca
    28141 tagttttctg agttgttcac atcagccaaa acttccacct tcactttctg cctattgctt
    28201 tatatttcct tgtgtaatcc gatatacctt tgcatccttc ataatttcat gatcaatacc
    28261 atctactgac gtggtcgtga caaaagtttg tactttatgt tgaatggtgc tcaaaagatg
    28321 tgtttgacgt gcatcatcca actcacttaa gacgtcatca agtaataaaa tggggtattc
    28381 ccccacttcc tgattcatta attctatttc tgctaatttt atcgaaagtg ctgttgtgcg
    28441 ttgttgacct tgagagccgt aagtttgtgc atccatgcca ttcacttgaa atgctaaatc
    28501 gtcacggtgc ggtccataca aactcacacc tcgctcaatt tcacgttcca tatggtgttg
    28561 cacatcttct agcacttgtt gaattaagac gtcctcagac tgcgagacgt cttctatttt
    28621 gatgcttggt aaatattgca gtgtcaaagt ttcacgttca ttcgtaatcc cagaatgaat
    28681 cggcgcggca agcaattcta actctttaat gaattgctgc ctacgctgag tcactttaac
    28741 cgcatattct acaaattgat gattcaatac ttcaagcatc gtcgtatctt gtgtcttttt
    28801 gagctgcagt tgcttcaaat aatgattacg ttgttttaaa atgcgttgat attgagataa
    28861 atcattcaaa tacaagcgcg aaatttgacc gagctccata tcaataaaac gccgtctcac
    28921 ttgtggtgca cctttgacga tacttaaatc ttccggggca aagaggacga cattcaaatg
    28981 gccaatatac tgggtcaaac gactctgttc taaatgattc accttaactt ttttaccttt
    29041 tttcgtaata aacatcgtga gcggcatcgt gccatgacga aaattaagct caccttctat
    29101 tttagcatac tcagcattaa agcgaatcaa ttctctgtca ttcgtcgtac ggtggctttt
    29161 agcgagtgcc aaagtataaa tcgattctaa taaattggtt ttcccttgtg cgttttctcc
    29221 gattaagata ttgacctcgg gatgacaatc gaggcttatc tgttcataat tgcgataatt
    29281 ttctagttgg agtgttttga gtttcattgc tcaccgaatt tgatgatgta tgaacctact
    29341 tcaggaatgt ctaattgatc gccatcttgc agttttttgc cacgacgcgt ttccaattcg
    29401 ccatttaaga agacctcata ttcgcttaag aaccatttcg cttggccccc agattcaata
    29461 atgccttcat agtttaaaaa ttgtcctaaa gttagtgcgc catcaacgat tacttcctca
    29521 gccaaattca tcactccatt catatttact cacttatata ttatacattt ttattacgaa
    29581 aatttcatgc tctagaaagg aattttcacg taaaagtttc atgtggaaca tgtgaatctg
    29641 tttcaacgga tgtacagcta ttttattgtt caagcgcttt gtcgatttcg tttttaatcg
    29701 cgtcgaaatc tgtctcgtct tcaacctgtt taccgttcac atagagtgcg ggtacgtatg
    29761 ggacttcctc ttttttcgct aatgcatgat cttcttgcgc gcgcttagct atcgctcctt
    29821 tttcgtcacg ataagctacc gtaatttgtt tacgttcttg ctcactcaaa tctaattttt
    29881 gtaattgctg ttgaattaaa tcgtctgtta accaatgttg actcccaaca tcatctttat
    29941 tgttaggttg ttgttcaaaa agtgcatgat gaaattgcca atatttgtca ggggcatatt
    30001 gattcaccgc gagtgctgct ttagcgccga gttcagattc ctccccatgg attaatacgt
    30061 tgacataacg aaattcaact ttgttattgt cgatatattc tttttctaat ttaggtttga
    30121 tattacgttc aaaatctccg caatacgggc atttaaagtc tccaaattct acgagtaata
    30181 ctttagaatc ttttttacct tgtgtcggtt gcttttgtgt ctctgctgca agtgtttcac
    30241 ctgatccgct atttcctttc ttcgatgttt tgaaagtggc taagctaaaa aagatacctg
    30301 caacgagtat gacaacaatg aatataatca accatttatt tttctttaac ataggtccat
    30361 tcctccattc attcgttata ttaattatac taaagttaaa tcactttgaa taattacacg
    30421 tgtaagttca ggaaatgact ttaaaatttt gtcatttttt tgcaacacat tgaaatggtg
    30481 acaccgctga aatgctggtg gatattgctt ttaactttgt ctctgagaag tttcacatat
    30541 tttgtgcaaa ctattaggaa aatcttaatg ttttagctaa gcattaaaaa agcagttggt
    30601 ctggtagcca actgcttttt ataggtgcgc cggtttagta cgtacggatt ggtaaaataa
    30661 gttgtgtcac agtgtcgtca tctttcggtt ttaaaataaa tggtttcatc gtaccgaaaa
    30721 attctacttc aacttcttcg ttatcgatag ccttcagtgc atccatcata tatttcgagt
    30781 tgaaagaaat ctttaagttg ccgccttcaa catcattggc agtcacttct tctttaaccg
    30841 taccaatttc tggtgatgta gaagacaatt cgatttgcgt atcacctgtg cttaatttga
    30901 tgacattatt gccaccttca cgcgcaagta acgacgcacg atcaatcgca tgataaaaat
    30961 cagagttatt gagccctaac ttaatttcgt agttttcagg gaataaacga gatgtatctg
    31021 gataatgtcc ctctaataaa cgtgaaataa agttgacatt gcctactcta aataatactt
    31081 ggttcgatgc gaagaaaata tcaatatgat cttcactgtc agtcataatt ttgtttaact
    31141 ctgctaatgc tttaccagga atgatgacat ttttatcttc aatctcttct tcaagcttca
    31201 actttcttac agccaagcgg tgtgaatcgg tcgcagtgca taataattca ttttgttgta
    31261 taagccagtt cacacctgtc aatactgggc gtgtttctga ggtggacact gcgaaattcg
    31321 tttgtgcaat gatgtttttc agcactttta ctggtaattg tagtgcatca tcacttgaaa
    31381 cttgtggtaa aagtgggtac tgatctggat caagtccact taagttgaat tcagaatgtg
    31441 ctgaagtaat taatgtttga aattgttcgt ttgttgaaag tttaacttct ttacctggta
    31501 gctttttaat aatgtccaca aagaagcggc ctggtaacac gactgaacct ggttcaacca
    31561 cgttaataat ttcttgacca tcgacttggt taggaattgt gatttcgatt gagatttcag
    31621 aatcagatcc tgttaaaaca ataccttcat tcgtcgcatc tattttaatc cccgttaaaa
    31681 tgggtaaagt tgctcttggt gaaatagctt ttaatgtgtc atttaattga gtgataaaat
    31741 aatctctttg aatagaaaac tccatcatct ataaactcct ttcagtcgtt tatatagtta
    31801 tagttattaa taaattagta atcatagtca taggtgctgt ggattagtgg ataactttaa
    31861 aaaagtcgcg aaaataaagg ttattcacat gtggataacc tgtgtatcat gtgtacaact
    31921 tttccacgtt atccacaaat taacttcgga tatctttttc caaactttcg atttcttgac
    31981 gtaaagttgg gtcattttcg atatcttttt taattttatc atgtgcatgg atgactgttg
    32041 tatggtcacg accaccaaat tcttctccaa ttttaggtaa tgaaaaatct gttagctcac
    32101 gtgataaata cattgcgatt tgtcgcggat atgcgataga tttcgttctt ttcttagcta
    32161 caaagtcttc aatacgcacg ccataatatt cgccgacaac cttttggata tcttgaatcg
    32221 tgattttttt agttttagtc acttgaataa tatcttttaa tgcatcggca gtgagttctg
    32281 ttgtgatggg ttttccttga agttttgaat aggctaagac acgtgtcaaa gcaccttcaa
    32341 gttcacgaat attcgtctga atctgattgg caatgtaagt taaagactca atcggaatat
    32401 cgagattttc ttcttcagtt tttttctgta agatcgccat acgtgtttcg aaatcaggtg
    32461 gtgtaatgtc cacgataagt ccccattgga agcgtgattt aagacgttct tctaaagttg
    32521 aaatttcttt tggcgggcga tcactagaga tgacgatttg cttcttgttt tgatgtaaat
    32581 cgttgaaagt gtggaaaaac tcttcttgcg tctgttcttt cttttggatg aactgaatat
    32641 catcaatcaa tagaatatcg atgttacgat atttttcacg gaatgactca gtatcattgt
    32701 ttcgaatcga ttgaatgaat tcgttcgtaa acttttcact tgacgtgtaa agcactttcg
    32761 catctggatt attttctaac acgtaatgtc caattgcgtg cataagatgc gtttttccta
    32821 aacctacgcc cccatagata aagagtggat tgtaggcatt ggcaggtgat tccgcaacag
    32881 caagacttgc agcgtgcggg aagcggttac caggtccaat tacaaacgtt tcaaaagtgt
    32941 tgtttgtatt gaactgctca ccagacacaa cgggttcaac aggtgtcgaa tgacctgatt
    33001 gatgagatga cgaagcgaca ttaagttctt gtagatcctc ttcagtaatg aacttaatgg
    33061 tgttaatggt ttgttgcgtg acagcttcta aatattgctt gatcagcttt gtatagttag
    33121 tagtaagcca attcgcaata aaaggctgtg ctgcaataac gatagcttca tcacgagata
    33181 gagcatagag tgttgtgtct ttgagccaag tgtcatatga aacagtagtg acattttctt
    33241 tacataagct gagaacgtta tcccaaattt cttgttctga cattttaact ccatcttcct
    33301 aagtaaaaat ttttgttata cacaatatcc ccacctgtga atgacgttaa tcacagggtg
    33361 ttaataatta tccacaattt aatcacaagc tgtggatgag tatcatttga ttgtgagtta
    33421 ttcacaatat atttgcgtaa attacatagt attcaaccta tgcagaataa gggattacac
    33481 cacttatcca cacaattata ctttttcaca aggggtgatg tcaaacggct gtgaatatgt
    33541 tgttatcatc ttaagtaact tgtgcacatg aaaatgttat ccacaatttg agtgacgagg
    33601 gatgtgaata agtggacaac ttttcaacaa cgattatcga taattatgaa aaaacccact
    33661 tgatttacag agatgatttt gttatattgt agtagttgct tgaaatgtag acgtttcatt
    33721 ttagtagaga aatatctatt ttgaacttat taaaaatgaa attaacttaa tttatctata
    33781 atgacgtatt tagataattg aatgaatgaa gatggaggtg ttttgcatgg taaaacgtac
    33841 ttatcaacca aataagcgta aacatagtaa agttcatggt ttcagaaaac gcatgagcac
    33901 taaaaacggc cgtaaagtat tagctcgtcg tcgtcgtaaa ggtcgtaaag ttttatcagc
    33961 ataagatcac tgactcattc agtggtcttt tttttgagtt aacggctatt ggatgagaca
    34021 tgattgagca attgtgacga attagagagg gctaatgaaa aacgatgaaa tttgagtggt
    34081 tgtcctaatc actatcccgc tattttgggc attttgaaga aagacgagtg atgtacaatg
    34141 gaaaaagcat accgaatcaa aaaaaatgct gactttcaat tgatttatcg caaaggtaaa
    34201 tctgtagcca atcgccaatt tgtcgtctat acttatgaaa ctcagacgtt aacacatttt
    34261 agactaggca tcagcgtctc aaaaaagtta ggtaatgctg tgactcgaaa tcgaattaaa
    34321 agaagcataa gagagtgctt taaagtgcac aaagaagaca tcttgccgaa agatattatt
    34381 gtgattgcaa gatttcctgc gaagacgatg tcgacagctg aaattcaaaa gagtttagaa
    34441 catgttttaa aaattgcgaa ggtctttaac aaacgaataa agtaggggag atttagactt
    34501 cggtttgtgt gacttcagac aaaccgaagt ctaacttcta ataatgaata aagcaaactt
    34561 tcattaaata ccgcaaataa aacatgtgat tcgcaataga ttgagaaaca ttttacaata
    34621 tgaaaaggaa tattgtgtta aagggaggta cgtcaatcgt ggaacaactg gatacgataa
    34681 cgagtatatc aacaccaatg ggggaagggg caatcggtat tgtccgttta tcaggtcatg
    34741 atgcggtcga gattgcagat aagctatata aaggcaagca tctgttaaag gatgtcccga
    34801 cgcatacgat taattatggt catattattg atccagaaac tgaagaagtc gttgaagagg
    34861 tgatggtgtc agtattacgc gcaccacgta cgtttacacg agaagatatc gtggagatta
    34921 actgtcatgg tggtattctg acaatcaacc gcgtacttga attaacgatg acatatggcg
    34981 caagaatggc tgaacccggt gaatatacga agcgtgcttt cttaaatggt cgtatcgatt
    35041 tatcacaggc ggaagcagtc atggacttta ttcgttctaa gactgaccgg gcgtctaaag
    35101 tagcaatgaa tcaaattgaa gggcgtttaa gtgacttaat taagcgtcaa cgtcaatcga
    35161 ttttggagat tttggcacaa gtcgaagtga atatcgatta ccctgaatat gatgatgtag
    35221 aagacgcgac aactgagttt ttattagaac gttcacaaga tattaaacaa gaaattcaaa
    35281 agttactcga cacaggtgta caaggtaaaa ttatgcgtga aggtttatct acagtcatcg
    35341 tcgggaagcc aaacgtcggg aagtcttcga tgttgaacaa tctcattcaa gataataaag
    35401 cgattgtgac ggaagttgct gggacaacgc gtgacgtgct cgaggaatat gtcaatgtcc
    35461 gcggtgtacc gttaagattg gttgatacag ccgggattcg tgagacagaa gatattgtcg
    35521 aacgtatcgg tgtggaacgt tcgcgtaagg ctttaagtga agcggactta attttattcg
    35581 ttttaaacta taacgaacca ttaacggaag atgatcgtaa attatatgaa gtgattaaaa
    35641 acgaagatgc gattgtcatt attaataaaa ctgatttaga acaacgctta gaccttgcag
    35701 aagtggaagc aatggtagga gacatgccaa tcattcaaac ttcgatgctc caacaacaag
    35761 ggatagacga gttagaaata caaatacgtg atttattctt tggtggagag gtacaaagcc
    35821 aagatatgac gtacgtgtct aattcacgcc acatttcatt attaaagcaa gctaaaaatg
    35881 caatacaaga tgcgattgat gctgcagaaa tgggtgtccc aatggatatg gtacaaatcg
    35941 atttaacgcg cacatgggaa attttaggtg aaattatagg tgaatccgca agtgaagaat
    36001 tgattgatca actgtttagt caattctgtc tcggaaaata atttttggag gttaacgaaa
    36061 tggtaaaatc attcgacgtg attgtagtag gcgctggaca ttctggtatt gaagctggac
    36121 tcgcatcagc gcgacgtggc gcacatacgc tcatgctgac aatcaattta gataatatcg
    36181 catttatgcc atgtaaccca tcagtagggg gacctgcgaa agggattgtc gtgcgagaaa
    36241 tcgatgcgct cggtggacaa atggcgaaaa caatcgataa aacacatatt caaatgcgta
    36301 tgttgaacac aggtaaaggg ccagctgttc gtgcattacg tgcccaagca gacaaagtgc
    36361 tatatcaaca agaaatgaaa cgtattttag aagatgaaga taacttagaa gtcatgcaag
    36421 gaatggtaga cgaactgatt atcgaagacg gagaagtgaa aggtgtccgt acgaatatcg
    36481 gtacagaata tcgcgcaaaa gcggttattt taacgacagg cacattttta cgtggtgaaa
    36541 ttattctcgg taatttgaaa tattcaagtg gtccaaacca tcaattgcca tcgattacac
    36601 ttgcagatca tttacgcgaa cttggatttg aagtcgtgcg tttcaaaaca ggaacaccac
    36661 cacgtgtgaa cgccaaaaca attgattata gtaaaacaga aattcaacct ggtgatgatg
    36721 tcggtcgtgc attcagttat gatacgacag aatatatttt agatcagctc ccatgttggt
    36781 tgacgtatac gaatggcgaa acacaccaag tgattgatga taacttgcat ttatccgcga
    36841 tgtactcagg tatgattaaa ggaacaggac cgcgttattg cccatccatt gaagataagt
    36901 ttgtgcgttt taatgataag ccaagacatc aacttttcct tgaaccagaa ggccgtaata
    36961 ccaacgaagt ttacgtccaa ggattgtcaa caagcttacc tgaagaagtg caacgtcaaa
    37021 tgttagcgac gattccaggt ttagaaaaag cagatatgat gcgtgcaggt tatgcgattg
    37081 aatatgacgc actcgtacca acacaattat ggccaacgct tgaaacgaaa atgatcaaaa
    37141 atctttatac agcaggtcaa attaacggaa catcaggcta tgaagaagcg gcaggtcaag
    37201 gtttaatggc tggaattaat gcagcagcgc gtgtgttagg taaagaggaa acgattttac
    37261 gccgttcaga cgcatacatc ggtgtgttaa ttgatgacct tgtgacaaaa ggaacgaatg
    37321 aaccgtatcg tttattgaca tctcgtgctg aatatcgttt attattacgt catgacaatg
    37381 cagatttacg tttaacagac ttaggtcacg agttaggttt aatttctgat gaacgttacg
    37441 aaagatttaa tacgaagcgt caacaaatta ctgatgaaat ggcacgttta gaacaaattc
    37501 gtgttaaacc gagcgaacgt gtacaacaaa ttattgaaga aaagggcggt tctcgtctta
    37561 aagatgggat tttggcgaaa gaattgttac gtcgtccaga aatgacttat gaaacgatta
    37621 ttgagatttt agaggaagag cgtcaattgc cggcagatgt tgaagaacaa gttgaaattc
    37681 aaacgaaata tgaaggttac atcacgaagt cattgcaaca agtagataaa gtgaaacgta
    37741 tggaacaaaa gaaaattccg gaagacttgg attacagtca aatcgacagt ctcgcaacgg
    37801 aagcgcgtga aaagttagct gaagtgaaac cgttaaacat cgcacaagcg tcacgtattt
    37861 ctggtgtcaa tccggccgat atttcgatct tattagtcta cttagaacaa ggcaaaattc
    37921 aaagggtgaa ataaatgagc gtagaatggt tagcgacaca attaagtgag cacggaatca
    37981 ctttatctga gcatcaaaag caacaatttg aaaaatatta tgaaatgctt gtagaatgga
    38041 atgagaaaat taatttaaca agtattactg aaaagcatga agtgtatttg aaacattttt
    38101 atgattccat cacgccgagc ttttatcatg atttcaatca gccactcaac ttgtgtgacg
    38161 tgggtgcagg tgcagggttt ccaagtattc cattgaaaat tatctttcca gaaattcatg
    38221 taaccattgt tgatgcattg aacaaacgca ttcagttttt aaatcaattg gcagaagcgt
    38281 tagaattgga aggtgtccga tttgtgcatg atcgtgcaga aacatttgcg aagaatgaag
    38341 actaccgggc gtctttcgat gttgtcacag caagggctgt cgcacgtatg acagtgttga
    38401 gtgaactctg cattccatta gtgaaaaagc atggtgtctt tttggcattg aaatcttcaa
    38461 aaggtcaaga agagttggaa gaagcacgct ttgcagtagg tgtattagga ggacgcattg
    38521 agcgagtcga tacttttgat ttaccggaag atgcaggtga acgtcaaatt gtaacgatag
    38581 aaaaacgtag ccaaacgcct aaaaaatatc cgcgtaaacc gggaacgcca aacaaatcac
    38641 cacttgttga ataaagcatg gattatggaa tattaaaggg agagaataaa catgaagaaa
    38701 cccttttcta agttatttgg tttaaaaaat aaagacgacc tattaaccgt gacagatgaa
    38761 gacaaaaagg gcgtgcaatc gatcaatatt gaaaaaatcg tacctaatcg ataccagccg
    38821 cgtcaaaagt ttgatacagc acgtattgaa gaactggccg agtcgattcg cgcacacggt
    38881 ttactccagc cgattgttgt acgtccgatt gaagaaaata tgtatgaaat cattgcaggt
    38941 gaacgccgtt ttcgtgcctt gcaaatgaat caaatgacag atgcggaagt actcgtgcgt
    39001 catttagatg atgaggaaac agctgttgtt gcactgattg aaaatataca acgtgaaaac
    39061 ttatcagctg tagaagaagc agaagcctac aaaaaattac tagcgtttga aggcattaca
    39121 caggccgaac tcgccaaaag tgttggaaag agtcaaagtt tcatcgcgaa taagttgcgt
    39181 ttgttgaagt taacgcctgt cgtattggaa gcggtccgtg aacatcaaat tacagagcgt
    39241 catgcccgtg cactcgttgg ccaaacgcct gaatttcaag aagagatgct cggtgtaatt
    39301 ttgaaagagc aattgaatgt gaaacaaacc gaggagcgtt tgaaggcaac aaccgttaaa
    39361 gacgatgtgg tggaagagaa agtcgtggcg cgtcctcctg aatttgcaca agatgtctct
    39421 gaagcccgtg acattattgc ggatagtttg atggaaatcc gtgcgaatgg aattcggtat
    39481 gaacaaaaag aaaaagagca tgaagattat gtggagattc agatccgatt gtatcgtaag
    39541 tgattgttat tgaggtgtga gcaaagactg cttgcacctt ttctttttgg ctctcagaag
    39601 tcttacacgg ttctcgtaat gtaggcgttg atgcatattc taataattga atatcaaaca
    39661 gtttgtaaat aaacgtatgt ttaggggagt ctcgcgtacg tctaatttta ttttttgagg
    39721 atgaaactgg ttttgtttta aggtttccta cttttctagc tgtatgaaga tttcagtctc
    39781 aggggctatg acctttatca ccaacttgga tatagtagta ttatcttgtt tgactaaagg
    39841 agttacaacg atgacgcgca aaaaagttac actgattgcg atagcggtat tattggcgag
    39901 tatggtgatc tatatttcaa taagtttaat caatttgaat caaaaaaagt ttattatggt
    39961 caagtgagtc ataaaaatga cagtatcgct ttgtattctg aaaaagataa acataccgca
    40021 tatttaaaga aagatataga acaaatgaaa gcaggcgact gggtgaaagt gacgatgacg
    40081 gatcaaaaag gcgttatttt gaatgtcgaa tctatagctg aaaatgaggt tccgaataaa
    40141 gtattaacaa caataaaagg ttagtcctat atctatgcgt atgatcaagt gaacgatgga
    40201 tgcttggtcg tacgcatttt tattacacac caacgactta attttgcaga ggttaacttt
    40261 ttaggctggt tgactggaag tgtgctattt ggtattgctt cctactatta tgctaaaagt
    40321 aaaattacta tagaaaaata accatttcaa aatcagcatc aaaaaaagag cctaggcgat
    40381 aagcacctaa gctctttttc gtacttataa tgtttctttc gctgctaaaa ctgtaccttg
    40441 tgtcaattcg tggctattca cccagtattc agtcacatca gcaccgcggt ctttaaaaat
    40501 agcgcggaca tgttcgctct ctgaaacagg gacgattggg tcgtttttac ccatagagag
    40561 gtagacagat ttacctgata agtcaagatt ttctggtact tctaatggat aaagtggtgc
    40621 gaataataag ccttttttgt atggcatatt ttcttctaac attaagctaa tcgcaatgtt
    40681 ggagccgttt gagaagccaa ctaaaacgac tttatctaag tcgaagttat attggtttgc
    40741 tgcactttca aggaattcgt gcaattcagt tgttctaaat ttcaagtctt ctacatcata
    40801 ttggccttca ccgtgacgtt tgaagaagcg gttcatgccg ttttctgata cgttaccacg
    40861 tacacctaac acgttgtatg atgggtctag catttctgca acgggtaata aatcgtgttc
    40921 gtctccacct gtaccgtgta ataagacaaa tgtaggctgt gatggttcac cttgtttaaa
    40981 aatatgttcc ataatatttc acctctttta taattatcgg ggtcttttaa ttgtaaatgt
    41041 ttcgccgaga cgcgcataat tgtcgccagc aagtcggctc acaggttgaa cgttttctac
    41101 atctacatac cctttttcta gatcaaataa atcttcatct atataaacct tttgaatttc
    41161 aagtaataac aaatcgttcg tgttttcatt gcgatcattt ttaatttcaa cgtgctgata
    41221 gagcttgact tcaaatcgga tactgctttc attcaagcta ggcacgttga ccatttccga
    41281 atctgtcgtt gtaaatgtcg tatgatccaa ttcgctttca tcaggaggta gcagggcagc
    41341 cgtttgattc gcattcgcaa cgttagcttc agtgacgaca tgtacgactg cttctttcgt
    41401 cgttaagata ttgcgcgcag tgtctttcat cgcgccttct ttacgattga ctgctaccga
    41461 caatagtgcc ggttctgaag agacaatatt gaaaaagctg aacggtgcaa tattgagaag
    41521 accttcctca gactgactcg taattaatgc gataggtcga ggcacaacag aaccgattaa
    41581 aaatttatac atttgttgct ttgataattc agatgcgtaa aaagcgtaca tggtcgccct
    41641 ccattctcat atcacttttg catatgactg tgtctcttat tttgtactac gcgttgtgtc
    41701 aaatgggcgt acttcagatt cgatgtactc tctttgatct tctaagaatg gtggtaatga
    41761 taaagtttcc cctaaagttt cgtatggttc gtcacccatg aatccaggac cgtcagttga
    41821 aagctcaatt aagatatgac ccacgcgagt gtaaagtgct ttgaagtaga aacggtctac
    41881 aataccagag cttcttacac ctaattcatt gtatctttcg aaccattctt caattgcttc
    41941 gtcattttct acacggaatg atacatggtg cacttgaccg taacctggac ggctttctgt
    42001 tgtttcgtct ttacgtaaga taacttgacc gccgttaccg cccttaccta cttctaaaag
    42061 tgttacattt tcttcttctt tgataggttt cataccataa aggtccatta atgcttgttt
    42121 gaactcatca tagtaactaa ctgtaatttc gattggacct aaaccgtaaa tggctttgtc
    42181 ttgaggcaca ggaccatttt tccatgcgac acctggttca acacctgtat tattttcatc
    42241 tgagaagagt tggtatcttt gaccgtcttc ttcttcaaaa cgtaatactt tagtaccgaa
    42301 tactgtgtcg atgtcgtcgt gtttaacacc aaactcgtcg aaacgcgctt tgtagtattc
    42361 taaagctgca tcgtttggta cacggaaacc agtacggctg attgagtttg tacctggtgc
    42421 gcctttaggg ttgtttggga aatcaaagaa tgtcatatct gtaccagcgt gaccttcatc
    42481 atcagcgaag aaagtgtggt acgtataaat gtcatcttgg tttactgttt ttttaacaag
    42541 tctcataccg agcacatcag taaagaagtg atagttacgt tctgcatcat ctgtcattgc
    42601 tgttacgtgg tggatacctt ttaatggata ttgtttcatt tttaaaaact cccttttaaa
    42661 ttaatagtct ctaatgcaat taccatattg catgaaatac gtggacactg ctcagttcat
    42721 actatggctg tgtacttaat gtttttaaaa cttgttgtaa agtgtttaat tcttcatctg
    42781 tcaggactga aaatacagtc tcaatagctt gtgcatgttc tgggaagatt ttttccatga
    42841 gctgctggcc tttgtcagtc aaagctacat aacttacgcg tttatcttta tgacattgtc
    42901 gtcgttttaa atagcccttt tgttctaaag aattaacaac ataagtagtg ctgctactgg
    42961 caatcaaaat gcgttcttga attcgttgta tactttgttc acctttattg tacaaaagtt
    43021 caagtacagc gaacgcagtg acactaaggc cgtacgattt gacatcattg cgaatcgtct
    43081 tatcaatcat gtcattggtt cgtttgatgc cgattaatgt tttgagtgcg gtttctgttc
    43141 tctgcaaatg ccaacacctc cttttatttc gaattcgagg caattataac gtggaaagaa
    43201 aactttgtaa agcaataagt ttaattttta taccagagag ccaaatgctt tgatatgtac
    43261 attgaaaagt ttataatggg cggtgaacga taactatttg aggaggcata atgatggcag
    43321 aagttaaaaa agggcataat aagtattatg taggtgattc agagagtaat cctgaagcaa
    43381 tcatgactta tgtaccaggg ggaactcaaa ttatcatcga ccatacagta gttggggatt
    43441 cactaagagg tcaaggtgta ggcaaacaac ttgtagaagc tgcagtaaag gatgcgcgtg
    43501 aaaacaattt caaaattcat gctacatgtc ctttcgcaaa aagcgtatta gagagaacac
    43561 ctgaatacca tgatgtatat ggtggataat aaaatattag aatgaataag gcgagggtct
    43621 catcaagaaa tatgagattc tcgccttttt ataagattgc atttacttaa tgtgcatatg
    43681 gcattttttg aatttgattt tcattcattt ttaatggaac atgatagtgg tgacagtttt
    43741 cccaagataa atgagacttg aatatctcaa aaccttgatt gaagaatgtt gacagtgtct
    43801 ccaaggtttc tggtgtcatg gcattcattt cgtaaatcaa ttcagtgagt tgtttgtcaa
    43861 agtaggcttc tgaaatcaat ggttgatcga atgtaaatga tttgtctacg aaaggataag
    43921 gtaagataaa gaatgtagga ccttcgaatc gatcatcccc aaaccagaaa ccaaactcga
    43981 taaagtgttc atcaaaagca gcatattcaa tgacttggtt cggctcgaac atttcgtgga
    44041 aagagttgta atggactaaa caagagatgt caaaagtccc ccagaaaagt cctggtttaa
    44101 ttttgcgtgc acgataaggt gcgatgaaat actgaagcgc tcgcgttgca aatgacatta
    44161 actttaatac ttctttactg attgcttcat tataatggtg gcgttttgta tcttgagaga
    44221 ataaagttgt atctgccact tcttgagggc gttcattaat agtgacctct atcccatgac
    44281 gatgtaaggc gtcttgaatt tgttcataat aactttgaat tgtaacacca tcttttaatg
    44341 gaatggtctc ttcaccgtta tttgtttcaa tcaaaattag atgtttaaca aggttgacac
    44401 ttacactata tgtggaggat tgataaaata atagtccagt agaaaatcct gttgttgtaa
    44461 tatctaaaat gacatgcccc cattgtggtt cttgaaaggc actcgcgagt ttatgtttac
    44521 ctagaatttg tgctaaacga tgaagtgttt ctttttcatc cttccattct gcaagcttta
    44581 acatgatgca tacctccaat ttcattattg tttagttgtg tatcgtatga aataacgata
    44641 actcaaattt ttcttcaatt aaaattgata attctaatta t
//
LOCUS       DANHPA010000006        44455 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.006, whole genome shotgun sequence.
ACCESSION   DANHPA010000006 DANHPA010000000
VERSION     DANHPA010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 44455)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 44455)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..44455
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.006"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            26..1669
                     /locus_tag="PTC28_000288"
     CDS             26..1669
                     /locus_tag="PTC28_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006837476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HDK5715609.1"
                     /translation="MRIIPLGGVGEIAKNMYIVEVDDEMFMLDAGLKFPEDEMLGIDI
                     VIPDIQYVLENKHKLKGIFLTHGHEHAIGAVSYILEQVEAPVYGSKLTIGLVKENLKA
                     RQINKKIRYYVVNNESVMRFKGVNITFFNTTHSIPDSLGVCIHTSYGAIVYTGEFKFD
                     QSLHGHYAPDMKKMAELGEEGVFALLSDSTEAEKPGYNTPENVIESHMFDAFAKVTGR
                     LIVSCYASNFIRIQQVLNIANRLNRKVSFLGRSLESSFSIARKMGYFNIPKDLLIPMS
                     EVENYPKNEVIIIATGMQGEPVEALSQMARQKHKIMNIQKGDSVFLAITASANMEVII
                     GNTLNELVRAGAHIIPNNKKIHASSHGCMEELKLMLNMMKPEYFIPIQGEFKMQIAHA
                     KLASEAGVNPEKIFLAEAGDVIHYDGEDMSLNEKVNAGNVLIDGIGVGDVGNIVLRDR
                     HLLAEDGIFIAVVTLDPKNRRIAAGPEIQSRGFVYVRESEALLKEAEEKVREIVEAGL
                     QEKRIEWSEMKQNMRDQVSKLLFESTRRRPMIIPVISEI"
     gene            1808..4171
                     /locus_tag="PTC28_000289"
     CDS             1808..4171
                     /locus_tag="PTC28_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HDK5715610.1"
                     /translation="MAQTKKRKSQTTRNRKRTSKKKQNDTPMRFTLVIVMAIVIMLGV
                     FQLGLVGIAIDSFFNYLFGLTRYLTYFLLLIALGFIAYNGKLPKTRRLTGSIVLQIAL
                     LFVAQLYFMATGGMRAKREPVLSYVFQSYDAAEHMQFGGGLFGFYLMHVVLPLISLAG
                     VVLLTLVLLVSSGILLLKKRHRDVAKVWLEQFKQSTASSYEKVKAHQSERRVTRKEKK
                     EQKRLEREQQRAAEPKDVSDFPEVDIPEEEPTDYPSIPIFGHHSVEVDAPSQPVQNEM
                     TPPTQPDIPKRHKAETETHSEVERSGSEGSITEAGAAENLQYEIPPLSLLKEPKRQQT
                     TSKTEVQRKGKLLETTLKNFGVDAKVTQIKIGPAVTQYEVQPAQGVKVSRIVNLHNDI
                     ALALAAKDIRIEAPIPGKSAVGIEVPNQKVAIVTLKEVLDEKFPAKNKLEVALGRDIS
                     GEPITAELNKMPHLLVAGSTGSGKSVCINGIITSILLNAKPHEVKLMMIDPKMVELNV
                     YNGIPHLLTPVVTNPHKAAQALEKVVAEMERRYDLFQHSGTRNIEGYNDFITRKNKEL
                     EEKEALLPYIVVIVDELADLMMVAGKDVETAITRITQMARAAGIHLIIATQRPSVDVI
                     TGLIKNNIPSRIAFAVSSQTDSRTIIDSGGAEKLLGKGDMLFIKNGGSTRTRVQGAFL
                     SDQEVQTIVDYVVAQQKANYVKEMEPDAVTEGSTASESDDPLYKEAYLFVLEQQKAST
                     SLLQRQFRIGYNRASRIMDDLERNQVIGPQKGSKPRQILVDLNGGEV"
     gene            4177..4893
                     /locus_tag="PTC28_000290"
     CDS             4177..4893
                     /locus_tag="PTC28_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDK5715611.1"
                     /translation="MSVNPDVNIVKEWILKEIEAENIKPGESLPGLLAIARQLDVTTD
                     NVQVAIHELVTEQIITQNFEEGARVKIPQPFFYPLDELMSIGRMISDKGYESGTVFLS
                     LDEEIASLDDCKVMQLEPNSPITVIERIRTANSQPVVYCLDKVTTNVLAHFGTHNQQT
                     SILKAIEAESHQTIAYAETEMEAISYEPYISDALEADPQDGLMLLRQVHYTEDGTPIL
                     YSLNYFKSSLVKFRTIRKRL"
     gene            4927..6201
                     /locus_tag="PTC28_000291"
     CDS             4927..6201
                     /locus_tag="PTC28_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDK5715612.1"
                     /translation="MKQLQDYPDQRISVLSTNKFKTTTMTFKFMAPLDKKTMTQRSLL
                     SKLLVRATQQFPTDKVFNQYLSELYGAYVNSYVSKYKDRHVITVTLEIVNERYLLDDE
                     SLFDKGIALLKEVILNPLVKNGAFDETFVAQEKSLLKKKLTAIEDNKSQIAYLRLLKH
                     MFGEHPYRYMAAGDLDEIDSITATDLYDTYRSMLNDDYCSVYVVGNVEEEATIQHIQS
                     EFNIQPFTYQATQFGQHIQHDAPVNEVIEQDSVDQAKLNMGFRFPTQYGEKDFYAFLV
                     FNMMFGGDPSSVLFNEVREQKSLAYSIHSQIDGKNGFLFVMSGVSAKDYQLAKETIIE
                     AFNRFKTGDFTEDKMALAKKIILSGRKESKDRPKNMIEMMHNQLLLEVPETDDQYEAR
                     IQAVKHEDIQRLCQNAHLDTIYILTKEDDTDE"
     gene            6194..7483
                     /locus_tag="PTC28_000292"
     CDS             6194..7483
                     /locus_tag="PTC28_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDK5715613.1"
                     /translation="MNKTYYQQIDETVYHSTLANGLNLFIIPKKDFQKTFVTYTTQFG
                     SLDHRFKPHGADEFVSVPDGVAHFLEHKLFEKEEGDLFTEFAEHDAQVNAFTSFDRTS
                     YLFSATNHIDDNILRLLKMVESPYFSEASVEKEKGIIAEEIKMYQEQPGYRLMFNTLR
                     AMYQDHPVRVDIAGSVESIYEITKDDLYLCYETFYHPSNMVLFVVGDVDPEHIENLVR
                     THEDARGIVAQPEIERDPLNEPIEVIEHQVVESMALQSPRIMLGLKHPVYDLSRRQGV
                     KEDIEMSFFFEMIYGEETNFYQSLLSQDLIDDTFSYQTVIERTYSFSLITSATTEPEQ
                     LKTLLLDELRARIGTLDDQHAFDLLKRQFIGEYISSLNAPEYIANQSTKFYFDGVSLF
                     ELLNVIDSITLDTMNETVRRRIDMNALVDSRLEIKKP"
     gene            7480..8184
                     /locus_tag="PTC28_000293"
     CDS             7480..8184
                     /locus_tag="PTC28_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDK5715614.1"
                     /translation="MKAIVIGGSGTIGRAITHDLLSNGYEVIVTYHHTPLATLMDEFQ
                     GQPVQFVQLDLSQPVNLEEKLGFVRNLDALIYASGHSLFGMLQDMTDTDIHEAYQVHV
                     FHFIKMTQYFVSQLIQSPHGRIVAISSIWGETGASFETIYSSMKAAQIGFVKSLAKEL
                     ARTSVTVNAIAPGVVAGSMTDGLDHAARTALLEEVPQNRWVDPNEIAHATRFLLSPLS
                     QSVTGTVQRINGGWYC"
     gene            8241..9086
                     /locus_tag="PTC28_000294"
     CDS             8241..9086
                     /locus_tag="PTC28_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmfK family protein"
                     /protein_id="HDK5715615.1"
                     /translation="MITREKREWYLEYQINVNRAGLLGDVSSLLGMMGINIGTINGID
                     QSIRAFIIKSDSEEKIKRFETLLKEIDDISLRVLREPELKDRLAVRHGRYVKQDEHDK
                     KIFRFERDDLGLLVDFMAELFKEEGHKLIGIRGMPRVGKTESIVAGSVSAHKKWLFIS
                     STLIKQTVRSSLIKGEYDKDHVYIIDGAVTARETNPKHQELVKEVMTLPSVKVVEHPD
                     LFVEASDYIMDDFDYIIELRAEENQEIEYEEMKKKTVRSKNNLDFGDTFGGFGDGFGD
                     GFGSL"
     gene            9105..9500
                     /locus_tag="PTC28_000295"
     CDS             9105..9500
                     /locus_tag="PTC28_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDK5715616.1"
                     /translation="MRTIGEVLQSKRERLGMTLTELEKRTQIQRETLVDIEQNRFDQF
                     KHPNHIRGFIQKYAQSVNIDGRILMEKHHEELPAVQHQAHVILEQIAQQKEVLTFTQT
                     DQQPKKVAILIGLLTAVTAVLWVLMTLML"
     gene            9542..10126
                     /gene="pgsA"
                     /locus_tag="PTC28_000296"
     CDS             9542..10126
                     /gene="pgsA"
                     /locus_tag="PTC28_000296"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HDK5715617.1"
                     /translation="MNIPNQITVFRVILIPIFMLFALVDFGMGQVTFLGGQPIRIEFL
                     ISGIIFILASLSDFLDGYLARKWQIVTNMGKFLDPLADKLLVSAALIVLVELGLTNSV
                     VAVIIIAREFAVTGLRLLQIEQGFVSAAGQLGKIKTAVTMVALILILLGEPFSQWIGF
                     SLGQVLLYIGVFFTVLSGIEYFYKGRDVFLQDKK"
     gene            10347..11522
                     /locus_tag="PTC28_000297"
     CDS             10347..11522
                     /locus_tag="PTC28_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family nicotinamide mononucleotide
                     deamidase-related protein"
                     /protein_id="HDK5715618.1"
                     /translation="MKVCIIAVGSELLLGQIVNMNAQFVSQKFNEAGHHVLEHIVVGD
                     NAQRLENVTRRALQQYDVLVFTGGLGPTKDDLTKQTVAEVLNKDLVMNQEAMDYIKDY
                     FRQNGKVMTPNNKQQALVIEGAEVLANQVGMAPGIYVRHDNQHIVMLPGPPKELQPMV
                     ENELMPHFSQGGQTIESEVLRFCGIGESQVETELMDLIDAQSNPTIAPLAGTHEVTIR
                     LTASGESKEVTKQLIAPIKQEILKRIGLYYYGSDDMTPERAVLQLQHQTFTVYDQVTD
                     GLLHARLKQEDSQHLLKGYMLHHPQFLDASVAIEDQLYSAALFVQALYDSEQAISILS
                     QDNIVYIGLLAGDSFQVKTIKMTQMRHLQRDRSQNYILITWLNWLKFPENQSLIDQI"
     gene            11661..12704
                     /gene="recA"
                     /locus_tag="PTC28_000298"
     CDS             11661..12704
                     /gene="recA"
                     /locus_tag="PTC28_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499795.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HDK5715619.1"
                     /translation="MDNERQKALDTVIKNMEKSFGKGAVMKLGENKDRRVSSVSSGSV
                     TLDHALGVGGYPKGRIIEVYGPESSGKTTVALHAIAEVQKNGGVAAFIDAEHALDPVY
                     AEALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIIIVDSVAALTPKAEIEGEMGD
                     THVGLQARLMSQALRKLSAAISKSKTTAIFINQIREKVGVMFGNPETTPGGRALKFYS
                     SVRLEVRRAEQLKQGQDIVGNRTKIKVVKNKVAPPFKVAEVDIMYGKGISREGELIDL
                     GVQYDIVDKSGAWYSYNGERMGQGKENVKQFLLENPKLEDEIDRKLREKLGIYDGDVE
                     ESEQEETQTLFDE"
     gene            12931..14490
                     /gene="rny"
                     /locus_tag="PTC28_000299"
     CDS             12931..14490
                     /gene="rny"
                     /locus_tag="PTC28_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002459258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HDK5715620.1"
                     /translation="MNLLSLLLILLGIILGVVVGYFIAQNLIYQKQLQAKQTAKDILE
                     QANKEAENLKKEKLIEAKEENQILRERVENELRERRTELQRQESRLLQKEENLERKSD
                     LLDKKDEILEQKESKLEERQQQVDAKESSVQSIIMKHEQELERISGLTQEEARKEQLS
                     RVEDELSQDIAVLVKEKENEAKEKVNQNAKELLATVVQRFAADHTSESTVSVVNLPND
                     EMKGRIIGREGRNIRTLETLTGIDLIIDDTPEAVILSGFDPIRREIAKTALINLVSDG
                     RIHPGRIEDMVEKSRREVDEIIRDAGEHATFELNVHNMHPDLIKILGRMHYRTSYGQN
                     VLKHSIEVAHLSGMLAAELNEDVTLARRAGLLHDIGKAIDHEVEGSHVEIGVELAKKY
                     GEPETVINAIHSHHGDVEPTSIISILVAAADALSAARPGARKETLENYIKRLERLEEI
                     SENYEGVEKAFAIQAGREIRVIVEPDTIDDLKSHRLARDIKNQIEGELQYPGHIKVTV
                     VRETRAIEYAK"
     gene            complement(14613..14831)
                     /locus_tag="PTC28_000300"
     CDS             complement(14613..14831)
                     /locus_tag="PTC28_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715621.1"
                     /translation="MSIHIDPEKFAELVVSANPSKKLKPEEIAKESIDLYIHAYRMAE
                     RYTNISSNCYDTASALEALKETELNLYR"
     gene            15029..15409
                     /locus_tag="PTC28_000301"
     CDS             15029..15409
                     /locus_tag="PTC28_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDK5715622.1"
                     /translation="MNQKIATCDTFSIDVEAVQQSKEEIAASNIEQVSQMFKSIADIN
                     RSKIVLVLCHHNELCVCDIAEILNVTVANASHHLRSLYKNGIVTFRKSGKRAFYRLYD
                     EHIRQLMMISIEHKKEVDENDSKS"
     gene            15393..17567
                     /locus_tag="PTC28_000302"
     CDS             15393..17567
                     /locus_tag="PTC28_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HDK5715623.1"
                     /translation="MIQSRKTYRIEGLSCANCAGKFERNVRGLASVEEAQVNFGASKI
                     YVTGDPTVEELEGAGAFENLKLTLDERKKISANADRSTMAQPTSWFDKVKQFYKAHQS
                     ICVATLFMLLGYISHLMSGENHLMTILLFACSILLSGSALLIRGVKNLVHVEFDMHTL
                     MTIAVIGGAIIGQWGEVAVVVILFAMSEALETFSMDKARQSMQSLMDIAPDEATVLRD
                     GQHVKIPVDDIVIGEKLYIKPGQKIALDGVVVEGRAAVNQAAITGESMPVEKVGGAEV
                     FAGTLNEDGILEVRVTKTAAHTTLAKMIQLVEEAQLNQTPAQAFIEKFARYYTPAIMV
                     IALLVAIVPPVVLHQSFLTWVYQGLAVLVVGCPCALVIATPISIVSSIGNAAKNGVLI
                     KGGIHLEQISRVRALAFDKTGTLTKGHPEVTTVLPLTEMRDDTELIGQIAAIESRSDH
                     PLARAIVRYAETKHHHFDSYDVTDFHSQTGQGVRANVEGRQFIIGQPQMFKMAQSTMK
                     TQIQQLQEQGNTVILVSVDDVLRLLIAVRDEVREQSQKAIQTLHELGIQHTVMLTGDN
                     EKTARAIAQTLHMSDVKADLMPVDKLNEIEQLKQQYGTVAMVGDGVNDAPALASASVG
                     IAMGGASTDTALETADIALLSDDMSKLPFTYRLSQKTMRMIKANITFAIAIKLLALLL
                     VIPGWLTLWIAVFSDMGATLIVALNAIRLLYVKADNTEVTTE"
     gene            17898..18692
                     /locus_tag="PTC28_000303"
     CDS             17898..18692
                     /locus_tag="PTC28_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00282 family metallophosphoesterase"
                     /protein_id="HDK5715624.1"
                     /translation="MRILFIGDIVGKVGRQTISELLPKLKQHYRPTLTIVNAENAAHG
                     KGLTEKIYKQLLREGVDFMTMGNHTYGQREIYDFIHEATRLVRPANFPDEAPGVGMRI
                     LQLNAKKLAVINLQGRSFMPMIDDPFKKADQLIAEAEKEADYIFVDFHAETTSEKNAM
                     AWYLDGRVSAIVGTHTHIQTSDNRVLPQGTAYITDVGMTGYYDGILGINRDEVIKRFI
                     TSLPQRHVVPDEGRSVLSGVIIDLKEDGTAKKIDRILINEDHPFEA"
     gene            18845..20605
                     /locus_tag="PTC28_000304"
     CDS             18845..20605
                     /locus_tag="PTC28_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HDK5715625.1"
                     /translation="MKSQLSWKVGGQQGEGIESTGEIFATAMNRKGYYLYGYRHFSSR
                     IKGGHTNNKIRVSTTPVHAISDDLDILVAFDQETIVLNHHEMREDSVILADSKAKPEK
                     PEDSKAQLIVLPFTEVAKELGTTLMKNMVAIGATAALMHLNTDTFESLITNMFEKKGE
                     KVVDLNIQALNEGYRLMQEQMGEVNGDFELEESSGVPHLYMIGNDAIGLGAISAGSRF
                     MAAYPITPASEVMEYMIDNLPKVGGSVIQTEDEIAAATMAIGANYGGVRAFTASAGPG
                     LSLMMEAIGLSGMTETPFVVINTQRGGPSTGLPTKQEQSDLMQMIYGTHGDIPKIVLA
                     PTDAEDAFYLTVEAFNLAEEYQCPVILLSDLQLSLGKQTVKALDHSKIEIRRGATITE
                     DIERDEDDKDYFKRYAVTESGVSPRPIPGVKGGIHHVTGVEHNEEGKPSEAVENRQNQ
                     MDKRMRKTEKLVIPKPVEGTTTHDDADILYLGFISTKGAIQEGTLRLEQQGYHINHLQ
                     IRQLHPFPTEVIQDAVDKAKKVVVVEHNYQGQLANIIKMNVNLGDKLIKQTKYDGTPF
                     LPHEIEDKGLEILNALKERV"
     gene            20606..21472
                     /locus_tag="PTC28_000305"
     CDS             20606..21472
                     /locus_tag="PTC28_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HDK5715626.1"
                     /translation="MATFKDFRNNVKPNWCPGCGDFSVQAAIQKAAANVGLEPDEVAL
                     ITGIGCSGRLSGYVNSYGVHSIHGRALPLAQGVKMANRDLTVIASGGDGDGYAIGMGH
                     TIHALRRNMNITYIVMDNQIYGLTKGQTSPSSAPGFVTKTTPKGNIEQNVAPLELALS
                     SGATFVAQGFSSDIKALTKIIEDAINHDGFSFVNVFSPCVTYNKINTYDWFKENLTAI
                     DDIENYDVSNKQAALQTVIEHDSLVKGIVYQDTTTPSYESQIDGLAETPLAHQDLNLT
                     EEQFESFTKQFI"
     gene            21731..22030
                     /locus_tag="PTC28_000306"
     CDS             21731..22030
                     /locus_tag="PTC28_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-binding protein"
                     /protein_id="HDK5715627.1"
                     /translation="MIDTLMSIQIIPQTPHGEDVIPFVDEAIKVIDESGLNYRVGPLE
                     TTIEGEMSSLLILIQKMNERMVELESPSIISQVKFYHVTEGISIETLTGKYDEMA"
     gene            22134..23684
                     /gene="miaB"
                     /locus_tag="PTC28_000307"
     CDS             22134..23684
                     /gene="miaB"
                     /locus_tag="PTC28_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HDK5715628.1"
                     /translation="MNEEQRKAGTIDVLAQRDSKEEKDYSKYFNFEHVYQPPSLKDAK
                     KRGKETVQYNRDFQIDEKFRGMGKGRTFLIKTYGCQMNAHDTEVMAGILTALGYTPTE
                     DVNTADVILLNTCAIRENAENKVFGEIGNLKHIKQERPDCLIGVCGCMSQEESVVNKI
                     LKSYQNVDMIFGTHNIHRLPQILEEAYLSKAMVVEVWSKEGDVIENLPKVRQGRIKAW
                     VNIMYGCDKFCTYCIVPFTRGKERSRRPEDIIEEVRDLARQGYQEITLLGQNVNAYGK
                     DIEDLEYGLGDLLADISKIDIPRVRFTTSHPWDFTDRMIEVIAEGGNIVPHIHLPVQS
                     GNDQVLKIMGRKYTRESYLDLVARIKAAMPDVALTTDIIVGYPNETEAQFEETLSLYE
                     AVGFEHAYTYLYSQRDGTPAAKMKDNVPTDVKKERLQRLNRLVGEYSSRALKAYEGET
                     VRVLCEGASKKDEAVLAGYTEKNKLVNFRAPKSVIGKIVDVKIVEAKQYSLNGEFVGV
                     SETTMVTV"
     gene            23685..24062
                     /locus_tag="PTC28_000308"
     CDS             23685..24062
                     /locus_tag="PTC28_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RicAFT regulatory complex protein RicA family
                     protein"
                     /protein_id="HDK5715629.1"
                     /translation="MYSREMILESAQKLSASIQSLETIQHYQRIETQIHQNEQIAQYM
                     AELKQNQKQSVNLQNYDKPVAFARSEEKIEEIQTKIDGIPIVNEFKKAQHEANELLHV
                     VIGTLSARIQQENIEAEDDQTHE"
     gene            24117..24626
                     /gene="thiW"
                     /locus_tag="PTC28_000309"
     CDS             24117..24626
                     /gene="thiW"
                     /locus_tag="PTC28_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy coupling factor transporter S component
                     ThiW"
                     /protein_id="HDK5715630.1"
                     /translation="MNTRKLTLTALFIAVNVVLSTVIVIPLGAIKAAPVQHFVNVLSV
                     VILGPWYGLAQAFLSSCIRVMFGTGTPFAFPGSMIGVLLGSLFYYVNRHLFVAAIGEV
                     IGTGIIGSLVCIPLAWILNVDHFLIKPLMAAFIVSSMIGASISYALLILLKRRGVLKH
                     LDLNRKYRK"
     gene            25488..28085
                     /gene="mutS"
                     /locus_tag="PTC28_000310"
     CDS             25488..28085
                     /gene="mutS"
                     /locus_tag="PTC28_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000073352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HDK5715631.1"
                     /translation="MSNVTPMMKQYLSIKAQHQDALLFFRLGDFYEMFYDDAITASRV
                     LEITLTKRDAKKDNPIPMAGVPYHSADSYIETLIQNGYKVAICEQMEDPRQVKGMVKR
                     EVVRIITPGTVMEKGGVDDTQNNYILSFVKADGYALSYCDVSTGELKVTHFEDESTLI
                     NEITTIRPNEIVVTEPLSETLQRQLNMITETITVVEQVSDQNYSVNSLSHPLMHQAIQ
                     IVLDYIYDTQKRDMSHIEAAVEYKALDYMKMDYYAKRNLELTESIRLKSKKGTLLWLM
                     DKTKTPMGARRLKQWVDRPLIQQAEIAKRHDAVDQFLHYFIERDTLRDYLTEVYDIER
                     LVGRVSFGNVNAKDLVQLKHSIAQIPAIKALLQSIEHEAIAHFNALEPLDDLLQVLSD
                     SLVDEPPLSVKEGGLFKAGFNEELDQYLDASKNGKQWLAQLQAQERERTGIKSLKISF
                     NKVFGYYIEITRANLSQFDPSAFGYERKQTLSNAERFITDDLKEKEAIILGAQDKAIE
                     LEYQLFVALREQVKTYIERLQQQAKIISEIDCLQSFAEIAQQYNYVRPQFSEDKTLNL
                     VDSRHPVVERVMDYNDYVPNDCLLNTEQFIYLITGPNMSGKSTYMRQVAIISIMAQMG
                     AFVPCQSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALKYATADSLIIFDEI
                     GRGTSTYDGLALAQAMIEYVAETSQAKTLFSTHYHELTELEQHLPSLKNVHVAADEYQ
                     GELIFLHKVKDGAVANSYGIQVAQLADLPEQVIARAQVILDTFEAHEKAQVTYTSTVD
                     QKSVSPTRVKASTVAEEPPQFEQPTFDLFASEAEVSEIELEIKQLNLSQMTPIEALVK
                     LSELQNRLQ"
     gene            28100..30040
                     /gene="mutL"
                     /locus_tag="PTC28_000311"
     CDS             28100..30040
                     /gene="mutL"
                     /locus_tag="PTC28_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HDK5715632.1"
                     /translation="MGKIKTLHTSLANKIAAGEVVERPSSVVKELLENSIDAGATEIN
                     IEVMESGIASIRVVDNGSGILQDDLGLVFHRHATSKLVEDDDLFHIRTLGFRGEALAS
                     IASVAKVTLQTSTDGVDGYEVYAEEGEIISEKPAKARKGTDIRVDALFYNTPARLKYI
                     KSLYTELGKITDIVNRMAMSHPDIRIALSNDGKKILQTNGSGRTNEVMAEIYGMKVAR
                     DLIRIEGDTSDYHITGYVAKPEHSRSNRHYISLFINGRYIKNFLLNKAVQEGYHTLMM
                     IGRYPIVYLNIEMDPVLVDVNVHPTKLEVRLSKEDQLFDLIVAKIREAFKDQLLIPKN
                     DLKSKYEPKKVLEQFEQQKMAFDQKQAAQTQTSHSNKEMTIDEEPAPYTDVIEPSDTA
                     KTPATSETNDDYAERQRALLNDMVDAPSPTNEVNSTDDSSNGATVSEIQQNHPQPSDK
                     PRRRVPYMEVVGQVHGTYIIAQNDEGMYLIDQHAAQERIKYEYYRDKIGEVNNENQSL
                     LIPLTFNFTKDEQLIIEQHLDPLREAGIFLEPFGGHDYIVDSYPVWFPQENVEEMIKD
                     MIEYVIRHKKVDIAKFREEAAIMMSCKRSIKANHYLKPNEMADLIDQLGEMEDPFTCP
                     HGRPVIINFSNYELERLFKRIQ"
     gene            30052..30585
                     /locus_tag="PTC28_000312"
     CDS             30052..30585
                     /locus_tag="PTC28_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000394287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate responsive antiterminator"
                     /protein_id="HDK5715633.1"
                     /translation="MKPHILPAIRSTKDLEKLLKTDYETCVLLDTHIGHLNGIMKLIS
                     QYELKPFMHIDLIKGMSHDEYACEYIIQTYRPRGIVSTKTKVIKKAKALGVVTIFRVF
                     IIDSHALERSIELIQRIEPDYVEVLPGIADKVIQEIHQKTGTPVIAGGLINTPEEVER
                     AVSSGAAYITTSDKSLW"
     gene            30613..31641
                     /locus_tag="PTC28_000313"
     CDS             30613..31641
                     /locus_tag="PTC28_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HDK5715634.1"
                     /translation="MIKPQKLKKGDTIAIVSPSSGLAGEPQVRWRTEQGIENIQTLGY
                     HVKVMDNSLNGIEWNFEHPKERAEILTAAFVDSEVQAILCTIGGYESVRIIPFLDDEV
                     IRQHPKIFIGYSDITPLHLHMYKLGITSFYGPALLTDFAENVELDAYTVDHLFSAIGD
                     TQPIGNIPTSDEVRVFGLRWEEDKRHIAREKMPNGDYMHISGHGTAQGQLIGGCFESL
                     DKLRGTPYFPKLEHFKGKILFLETSELQVDPMSFEETLRAFGLMGIYDVVSGIVLGRP
                     QNGVHQEAYHDKLRLIMKEFHQATLPIIGNASFGHNEPKCTLPYGVQATLSVDTLSLS
                     IDEAAVVN"
     gene            31882..32697
                     /locus_tag="PTC28_000314"
     CDS             31882..32697
                     /locus_tag="PTC28_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016424956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin family protein"
                     /protein_id="HDK5715635.1"
                     /translation="MNVYLAEFIGTALLLLMGGGVVANVALKKTNGNGADWIVITVGW
                     GLGVTLGVYAVGQISGAHLNPAVTLALAMNGDFAWAQVPGYIIAQLIGGVFGGMLTWL
                     MYLPHWRATEDKATKLGVFATGPALKNYTANFISEIIGTAVLTSGLLYIGANKFTDGL
                     NPLIVGALIVAIGLSLGGTTGYAINPARDLGPRIAHAILPITGKGGSGWGYAIVPILG
                     PMVGGMLGAVLYRLAFKGIFDVWTIVTLIALVLTLLLGVAMNKKAPKDEIAKI"
     gene            32993..34495
                     /gene="glpK"
                     /locus_tag="PTC28_000315"
     CDS             32993..34495
                     /gene="glpK"
                     /locus_tag="PTC28_000315"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HDK5715636.1"
                     /translation="MGNYILSIDQGTTSSRAILFNEEGEIVGVAQREFKQHFPKSGWV
                     EHDANEIWSSVLSVMASVLTENNVSANEVKGIGITNQRETTVVWDKETGRPIYNAIVW
                     QSRQTQPICDALKEEGHEQTFRDKTGLLLDPYFSGTKVKWILDKVEGAREKAAKGDIL
                     FGTIDTWLVWKLSGGRAHVTDYSNASRTLMYNIHELKWDDELLELLDVPKAMLPEVKP
                     SSEVYCETIDYHFFGQNVPIAGIAGDQQAALFGQACFERGDVKNTYGTGGFMLMNTGE
                     EAVKSGNGLLTTIAYGIDGKVNYALEGSIFVSGSAIQWLRDGLRMINSAPQSEDYAKR
                     VDSTEGVYVVPAFVGLGTPYWDSDARGAIFGLTRGTEKEHFIRATLESLCYQTRDVIE
                     AMAQDSGIEVNSLRVDGGAVKNNFLMQFQSDLLNIEVERPEINETTALGAAYLAGIAT
                     GFWKDKSEIQRRWKLEKSFEPEMNQKESNRLYKGWKKAVEATQVFKLDEE"
     gene            34622..36292
                     /locus_tag="PTC28_000316"
     CDS             34622..36292
                     /locus_tag="PTC28_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase/oxidase"
                     /protein_id="HDK5715637.1"
                     /translation="MRLSTLKREAVKKRMQNEAYDLIVVGGGITGAGIALDASARGMK
                     VALVEMQDFAQGTSSRSTKLVHGGLRYLKQLQVGVVAETGKERAIVYENGPHVTTPEW
                     MLLPMHKGGTFGKFSTSIGLAMYDRLAGVKKSERKKMLSKKETSAKEPLVKQDGLKGG
                     GYYVEYRTDDARLTIEVMKKAAEQGADIMNYAKVTNFLYDNKEKVNGVAVVDRLGNET
                     FEIKGKKVVNATGPWVDEVRSADYSKNNKQLRLTKGVHVVIDQSKFPLRQAVYFDTEK
                     DGRMIFAIPREGKAYVGTTDTFYNNDKSKPLVNQEDRDYLVDAINYMFPTVHITDADI
                     ESTWAGVRPLIFEEGKDPSEISRKDEIWEGKSGLLTIAGGKLTGYRHMALEIVDLVEK
                     RLKQEYKLKFKEVDTKHIPISGGDVGGSANFEQFIEDKVAVAKAMNLDTDLARRLATK
                     YGSNVDDLFAIAQAAQHQNTGLPLELYVELVYGVQNELVVKPTDFLVRRIGALYFDID
                     TVLRHKDTVVDVLADLLGYDANVKAVYKQELEEAIQEARHGQHQPAEK"
     gene            complement(36586..36792)
                     /gene="hfq"
                     /locus_tag="PTC28_000317"
     CDS             complement(36586..36792)
                     /gene="hfq"
                     /locus_tag="PTC28_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HDK5715638.1"
                     /translation="MIEKRNIQDEYLEKFKSEGKELTVFLTNGFQLRGTIVDFDQYVI
                     DILSQGRHHLIYKHAISTFLEGTN"
     gene            complement(36785..37741)
                     /gene="miaA"
                     /locus_tag="PTC28_000318"
     CDS             complement(36785..37741)
                     /gene="miaA"
                     /locus_tag="PTC28_000318"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HDK5715639.1"
                     /translation="MSQNKPFIVAIVGPTASGKTELGVALAKAIDGEVISGDSMQVYQ
                     GMDIGTAKVTPDEMDGIPHHLIDILKPDETYSAYDFQQQAQQLITDITTRGKVPIIVG
                     GTGLYIQSVIYDYQFDDETISPETEQRVAEQMAKLKSYTNEAIHDYLGTFDPISHQEI
                     HPNNRKRVERAISYYLSTKKVLSNRKKSTQLTENYDTLLVGIKMSRDTLYSRINSRVD
                     MMLSHGLLDEVQELIELGYESCQSMQAIGYKEIIPVIKNEMPLDEAITLLKQHSRNYA
                     KRQMTWFTNKLNVHWLDREKMSLTSMLSELKPLINKRRNEHD"
     gene            complement(37728..38681)
                     /locus_tag="PTC28_000319"
     CDS             complement(37728..38681)
                     /locus_tag="PTC28_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipase"
                     /protein_id="HDK5715640.1"
                     /translation="MVKSEAMKIAVTDGTMIEAKVDRTDFEAVGIVHIFHGMAEHMDR
                     YVTLVNKLNQQGYHVIRHNHRGHGCDVDGIRGHFDSMTQVVQDAFEIQSTLKAQFNPH
                     LPLILIGHSMGSIIARQFVQTYPQAVQGLILSGTGYFPTWYYIANLPLLKIITLVCGK
                     KRRMNWLNQMTTGRFNKNFKPTRTTSDWLSSDKSEVDHFIQDPHTGFLVSNQLIFSVL
                     QTMMRTSRVKNIADMNLELPILLISGKDDPFGANGKGIRRFGKILKRGGIHHITVQLY
                     KNKRHEVLFEKDKETVWRHMLDWMSRQIIKKQKVGERGVTK"
     gene            39157..39411
                     /locus_tag="PTC28_000320"
     CDS             39157..39411
                     /locus_tag="PTC28_000320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715641.1"
                     /translation="MITDEGELSEVLKADRINRIIDVLIQVDSFKFVKISQQHPFQQQ
                     HESDIRINNQRPVYQFSDIEKVFSTDTCIKHKKHHCFQRT"
     gene            complement(39438..39911)
                     /locus_tag="PTC28_000321"
     CDS             complement(39438..39911)
                     /locus_tag="PTC28_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HDK5715642.1"
                     /translation="MHLYDIEVPKIDGSTYPLSQYKGDVLLIVNTASECGLTPQFEGL
                     QKLYDTYRDKGFTILGFPSNQFGKQEPGSGKEAATNCQLNYGVTFPMHEKIEVNGDNA
                     HPLYNYLKSQKSGIFGDKIKWNFTKFLVDRDGQVVKRFSPQKTPEHLKQDIEHLL"
     gene            40017..41249
                     /gene="hflX"
                     /locus_tag="PTC28_000322"
     CDS             40017..41249
                     /gene="hflX"
                     /locus_tag="PTC28_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HDK5715643.1"
                     /translation="MRKTELHSTEKIKETAVLVGVDLYQSHYDFESTMNELNALAFTC
                     DLDVQGQWTQQKNQVDHKYYVGRGKLTEIQDFIEFHDIDVVVANDELTTAQSKNLNAR
                     LGVKVIDRTQLILEIFALRAKSKEGKLQVEYAQLDYLLPRLTGHGKSLSRLGGGIGTR
                     GPGETKLETDRRHIRTRMNEIKRKLAEVEAHRERYRNQREQNRVFQVALIGYTNAGKS
                     SWFNTLTAADTYEQDLLFATLDPKSRQLKINDGFEMVISDTVGFIQKLPTTLIEAFKS
                     TLEEARQADLLIHVVDASHAEYKIQYDTVNEIVQELDMQDIPQVVIFNKKDLFTGTTT
                     PVTQYPSVFVSSKNEADIEKVKNLLFQAIQKQFDFYTAQLPSSAADQLYHLKQHTLVT
                     KLDYDEATDQYHIEGYQK"
     gene            41267..42514
                     /locus_tag="PTC28_000323"
     CDS             41267..42514
                     /locus_tag="PTC28_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine gamma-lyase family protein"
                     /protein_id="HDK5715644.1"
                     /translation="MTQLTKLIEEVETTLAPYFKDIETRAFENQARVLDAFHKVKITE
                     ADLVGSTGYGYDDYGRDHLEAVYAETFKAEDALVRPQLISGTHAITVALQSTLKPGDS
                     LMYITGSPYDTLLEVIGINGNGVESLKEYGIHYQEVSLKAGHIDVERVLETIDDTTKV
                     IAIQRSKGYDQRPSINVDEIGDAIRQIKAQYPEMIVFVDNCYGEFVETKEPIEVGADL
                     MAGSLIKNPGGGLAKIGGYIVGRRDLVERCGYRLTAPGIGKEAGASLYALQEMYQGFF
                     LSPHVVSQSLKGALFTSLLLERLNMRTSPRYDVKRTDLIQTVSFDTKEQMIQFCQSIQ
                     HASPINAHFSPEPSYMPGYEDDVIMAAGTFIQGSSIELSADGPIRPPYEAYVQGGLTY
                     EHVKIAVTRAVEKLIKVGLIKLK"
     gene            42690..43058
                     /locus_tag="PTC28_000324"
     CDS             42690..43058
                     /locus_tag="PTC28_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016424965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDK5715645.1"
                     /translation="MDNDTIRRNMPVFPMSVVSRLTELSARQIRYYETHELVIPSRTE
                     GNKRLFSLNDLETLLSIKHLLEKGFNMKAIKEIMLEDSQKTLNDEEERLRKQILVDTT
                     QKPQRDSIPLNRGDLSRFFK"
     gene            43082..44422
                     /gene="glnA"
                     /locus_tag="PTC28_000325"
     CDS             43082..44422
                     /gene="glnA"
                     /locus_tag="PTC28_000325"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HDK5715646.1"
                     /translation="MPKQHFTKDDIRRFAKEENVRYLRLQFTDILGTIKNVEVPVSQL
                     EKVLDNEMMFDGSSIEGFVRIEESDMYLYPDLDTWVIFPWTAGQGKVARLICDVYTTD
                     HQPFSGDPRSNLKRVLKEMESLGYTDFNLGPEPEFFLFKLDEKGEPTMELNDHGGYFD
                     LAPTDLGENCRRDIVLELEDMGFDIEASHHEVAPGQHEIDFKYADAITACDNIQTFKL
                     VVKTIARKHNLHATFMPKPLFGVNGSGMHFNVSLFKGKENAFYDEKGEMQLTEDACHF
                     IAGIMKHARGYTAVCNPLVNSYKRLVPGYEAPSYIAWSGKNRSPLVRVPSSRGLSTRV
                     EIRSVDPAANPYMALATILQAGLDGIKNKLEVPEPVNQNIYEMNREEREAVGIEDLPS
                     TLYTALKAMRENPIVKDALGEHIYNQFINSKSIEWDYYRTQVSEWEVEQYMKQY"
BASE COUNT        14658 a         7614 c         9499 g        12684 t
ORIGIN      
        1 tttagtaaag aagaaaaata aagacatacg cattatcccc ctcggtggcg taggagaaat
       61 cgccaaaaac atgtatatcg tcgaagtaga tgatgaaatg tttatgcttg atgcagggtt
      121 aaagttccct gaagatgaaa tgttagggat tgatatcgtt attcctgaca tccaatacgt
      181 attagaaaac aaacataaat taaaagggat tttcttaaca cacggtcatg aacatgcgat
      241 tggtgcagtt tcatacattt tagaacaagt tgaagcgccg gtttatggtt ctaaattaac
      301 gattggttta gtgaaagaaa acttaaaagc acgtcaaatt aataagaaaa tccgttatta
      361 tgtggtcaat aacgaatctg tcatgcgttt taaaggtgtg aatattacat tctttaatac
      421 gacgcacagt attccggata gtttaggtgt atgtattcat acgtcatacg gtgccatcgt
      481 ttatacaggt gagtttaaat tcgaccaaag tttacacggt cattatgcac ctgacatgaa
      541 gaaaatggct gaattaggcg aggaaggtgt gttcgcatta ttaagtgatt ccactgaagc
      601 tgaaaaaccg ggctacaaca cacctgaaaa cgtcattgaa agtcatatgt ttgatgcgtt
      661 tgcgaaggtg actggacgtc ttatcgtgtc atgttatgca tcaaacttta ttcgcattca
      721 acaagtgtta aatatcgcaa atagactaaa tagaaaagta tcatttttag gccgttcatt
      781 agaaagttca tttagtattg cacgtaagat gggctatttc aacattccaa aagatctatt
      841 aattcctatg agcgaagttg aaaattatcc gaaaaatgaa gtgattatca ttgcgacagg
      901 gatgcaaggt gaacctgttg aagcattaag ccaaatggca cgtcaaaaac ataaaattat
      961 gaacatccaa aaaggggatt ctgtatttct tgcgattacc gcttcagcca atatggaggt
     1021 cattattggt aatactttga atgaacttgt acgtgcgggt gcccatatta taccaaacaa
     1081 caaaaaaatt catgcatcaa gtcacggttg tatggaagag ttgaaattaa tgctcaatat
     1141 gatgaaacct gaatacttca ttccaattca aggtgagttt aagatgcaaa tcgcgcatgc
     1201 aaaacttgcg agtgaagcag gtgtaaatcc tgaaaaaatc ttcttagctg aagcaggcga
     1261 cgttattcat tacgatggtg aagatatgag cttgaatgaa aaagtgaatg cagggaatgt
     1321 gctgatcgat ggtattggtg tcggtgatgt cggtaatatt gtattacgtg atcgtcattt
     1381 acttgcagaa gatggtattt ttatcgctgt cgttacgctt gatccaaaga acagaagaat
     1441 tgcggcgggt cctgaaattc aatcaagagg ctttgtttac gtacgtgaaa gtgaagcgtt
     1501 attgaaagaa gctgaggaga aagtccgtga aattgtagaa gctggtttac aagaaaagcg
     1561 tattgaatgg tctgaaatga aacaaaatat gcgtgatcaa gtgagtaaat tactctttga
     1621 aagtacacgt agacgaccaa tgattattcc agtgatttca gaaatatagt tttaaaatca
     1681 gtgtgaagtt caaacaagaa aacgaatctt actctttgaa agccacgcca tttttaaaga
     1741 ggagattcgc ttttttcatc atacaggttg atgacatcat tttttagaaa gtagaaggtg
     1801 acgaagcatg gcgcaaacca agaaacggaa atcccaaacg acgcgcaata gaaagcgtac
     1861 ttcgaaaaag aaacaaaatg atacgcctat gcgatttaca ctcgttattg tgatggcgat
     1921 tgtcatcatg ttaggcgtgt ttcaactcgg actcgttgga attgccattg atagcttttt
     1981 taattactta tttggtttaa cacgttatct tacatacttt ttactcttaa tagcgcttgg
     2041 ttttatcgca tataacggca aattacctaa aacgcgtcga ttgactggtt cgattgtctt
     2101 acaaattgcg ctgttatttg ttgcgcaatt atacttcatg gcaactggcg gtatgagagc
     2161 gaaacgtgag cctgtgttat cttatgtgtt ccaaagttat gatgcggctg agcatatgca
     2221 atttggcggc gggttattcg gtttttattt gatgcatgtg gtgttgccac tcatttcgct
     2281 tgctggtgtc gttttactta cacttgtgtt actcgtttca agtggcattt tattactgaa
     2341 aaagcgccat cgtgatgtgg caaaagtgtg gttggaacaa tttaaacaat caacagcctc
     2401 gtcatatgaa aaggtgaagg cacatcaatc tgaacgacgt gtgacaagaa aagaaaaaaa
     2461 agaacagaag cgactcgagc gcgaacaaca acgtgcagca gagccgaaag atgtgtcgga
     2521 ttttcctgaa gtcgacattc cagaagagga accgactgat tatccttcga ttcctatttt
     2581 cggtcatcat tctgtagaag tggatgcacc aagtcagcca gtgcaaaatg agatgacacc
     2641 accgacgcaa cccgatatac caaagcgtca taaagctgag acagaaacac acagtgaagt
     2701 agagagaagc ggctcagaag gtagtattac tgaagcgggt gcagcagaaa atctacaata
     2761 cgaaatccca ccactgtcgc tactaaaaga accgaaacgt caacaaacga cttctaaaac
     2821 tgaagttcaa cgtaaaggaa agttactcga aacgacatta aaaaactttg gtgtcgatgc
     2881 gaaagtgacg caaattaaaa ttggaccggc agtgacgcaa tatgaagttc aaccggcaca
     2941 aggtgttaaa gtaagtcgta tcgtcaattt acataacgat attgcactcg cacttgccgc
     3001 taaagatatt cgaattgaag cgcctattcc aggtaaatcg gctgtaggga ttgaagtgcc
     3061 taatcaaaaa gtagcgattg ttacgttaaa agaagtattg gatgaaaaat tcccagctaa
     3121 aaataaatta gaagtggcat taggtcgaga tatttcaggt gaaccgatta cagcagaact
     3181 gaataaaatg ccgcacttat tagtcgcagg ttcgacaggg agtggtaaat cagtttgtat
     3241 taacggtatc attacgagta ttttgttgaa tgccaagcca catgaagtca agctcatgat
     3301 gattgaccct aaaatggtag aattaaatgt gtacaacggt attccgcact tattaacacc
     3361 agttgtcaca aatccacata aagctgcaca agcacttgaa aaagttgtgg cagaaatgga
     3421 aagacgctat gatttattcc aacattctgg tacgcgaaat atcgaagggt ataatgactt
     3481 tattacgcga aaaaataaag agcttgaaga aaaagaggcg ttattaccat atattgtcgt
     3541 cattgtcgat gagttagctg acttaatgat ggtagcaggt aaagatgttg aaactgccat
     3601 tacacgtatt acacaaatgg cacgtgctgc agggattcat ttgattatcg caacacaacg
     3661 cccgtcagtc gatgtcatta ccggcttgat taaaaataat atcccatctc gtatcgcatt
     3721 tgcggtgagt tcgcaaacag actctcgtac aatcattgat agtggtggtg ctgagaaact
     3781 gttaggtaaa ggggacatgc tctttattaa aaatggcggt tcgacgagaa cacgtgtcca
     3841 aggtgccttt ttaagtgacc aagaagtaca aacgatcgtt gattacgtcg tggcacaaca
     3901 aaaagcgaac tatgtaaaag agatggaacc agatgcggta acagaaggta gtacagcaag
     3961 cgaaagtgat gatccgcttt acaaagaagc ttatttattc gtacttgaac aacaaaaggc
     4021 gagtacgtca ctgcttcaac gccagtttag aattggttat aatcgtgcat caagaattat
     4081 ggatgattta gaacgtaatc aagtgattgg cccgcaaaaa ggtagtaaac cgagacagat
     4141 tttagttgat ttaaatggtg gagaggtgta acgcatatgt ctgtaaatcc tgatgtgaat
     4201 attgtaaaag aatggattct taaagaaata gaggcagaaa acattaaacc tggcgaatcg
     4261 ttaccaggtt tattggccat tgcacgtcaa ctcgatgtca caacggataa tgtacaagta
     4321 gccattcatg agcttgtgac cgaacaaatt attacacaaa attttgaaga gggtgcacgt
     4381 gttaaaattc cgcaaccgtt tttctaccct ttagatgaat tgatgagcat tggccggatg
     4441 atttctgata aaggttatga aagcggaacg gtatttttaa gtcttgatga agaaatcgct
     4501 tctctcgacg actgtaaagt gatgcaatta gaaccgaatt caccgattac agtgattgaa
     4561 cgtatacgca cagctaatag tcagcctgtt gtatattgtt tggataaggt gacaacaaac
     4621 gtattggctc attttgggac acataatcaa caaacgtcca ttttaaaagc gattgaagct
     4681 gagagtcatc aaacgattgc ttatgctgaa actgaaatgg aagccattag ttatgaacct
     4741 tatatttcag acgcactaga agctgacccc caagacgggc tcatgttatt gagacaagtc
     4801 cattacacag aagatggcac gccgatactc tattctttaa attattttaa aagtagccta
     4861 gtgaagtttc gaacaattcg aaaacgtcta taactatatc aaaaccattg ttaaaggagg
     4921 agttgcatga aacaacttca agattacccg gatcaacgta tatccgtttt atcaacaaac
     4981 aaatttaaaa cgacgacgat gacatttaaa ttcatggccc cattagataa aaaaacgatg
     5041 actcaacgtt ctttgttaag taaattactc gtccgtgcca cacaacaatt tccaacagat
     5101 aaagtattca atcaatatct ctctgaattg tatggtgctt atgttaatag ttacgtgtcg
     5161 aagtacaaag accgccacgt cattactgtt acacttgaaa ttgtaaatga acgttatttg
     5221 ttagatgatg aatcattgtt tgacaaaggg atcgcattat taaaagaggt cattctgaat
     5281 ccacttgtta aaaatggtgc ctttgatgaa acgtttgttg cacaagagaa aagtttattg
     5341 aagaaaaaac tgacagcgat tgaagataat aaatcacaaa ttgcgtattt acgtttactt
     5401 aagcatatgt ttggtgagca tccttaccgt tatatggcag caggcgacct agatgaaatt
     5461 gatagcatta cagcgacaga cttatatgat acatatcgtt cgatgttaaa tgatgactac
     5521 tgttcagtat acgtggtagg caatgttgag gaagaagcta caattcaaca tatacaatca
     5581 gaatttaata ttcaaccttt tacatatcaa gcgacacaat tcggtcaaca tattcagcat
     5641 gatgcacctg ttaatgaagt gattgaacaa gacagtgtag atcaggcaaa attaaacatg
     5701 ggttttcgtt ttcctaccca atatggtgaa aaagattttt atgcatttct tgtgttcaat
     5761 atgatgtttg gtggagatcc ttcatcagtg ttattcaatg aagtccgaga acaaaagagt
     5821 cttgcttact caattcattc acaaattgat ggcaaaaatg gtttcctatt cgtcatgagc
     5881 ggcgtttcag ccaaagatta ccaattagcc aaagaaacga ttattgaggc atttaaccgt
     5941 tttaaaacag gggactttac agaggacaaa atggcattag cgaagaaaat cattttatcg
     6001 ggacgtaagg aatcgaaaga ccgtccgaaa aatatgattg aaatgatgca taatcaattg
     6061 ttgctcgaag ttccagaaac ggatgaccaa tatgaagcgc gaatacaagc cgttaaacat
     6121 gaagacattc aacgtctctg tcaaaatgcg catcttgata cgatttatat tttgacaaag
     6181 gaggatgata cggatgaata aaacatacta tcaacaaatt gatgaaacgg tctatcattc
     6241 tactttggcg aacggcttga acctgttcat tattccaaag aaggattttc aaaaaacgtt
     6301 tgtgacatat acaacgcagt ttggttcatt agaccatcgt tttaaaccac atggtgcaga
     6361 tgaattcgtt tcagtcccag atggtgttgc tcatttctta gagcacaagt tgtttgaaaa
     6421 ggaagaaggc gacttattta cagaatttgc cgaacatgat gcgcaagtga acgcatttac
     6481 aagcttcgac cgtacgagtt atttatttag cgcaacaaac catattgacg acaacattct
     6541 acgtttattg aaaatggtag agtcacctta tttttcagaa gcatcagtag aaaaagaaaa
     6601 aggtattatt gcagaagaaa ttaaaatgta tcaagagcag ccgggatacc gtttgatgtt
     6661 taatacgtta cgtgcgatgt atcaagatca tcccgtacgt gtcgatattg cagggtcagt
     6721 tgagagcatt tatgaaatta cgaaagacga tttatattta tgctatgaaa cgttttacca
     6781 cccttctaat atggtgctat ttgttgttgg tgatgttgat cctgagcata ttgaaaattt
     6841 agttcgtaca catgaagatg cacgcggaat cgtggcacaa ccagagattg aacgtgatcc
     6901 actcaatgaa cctatcgaag tgattgagca ccaagtcgtt gaatcgatgg cccttcaatc
     6961 gccaagaatc atgctcggct tgaaacatcc ggtctatgat ttgtctcgcc gtcaaggtgt
     7021 caaagaagat atcgaaatgt catttttctt tgagatgatc tatggtgaag aaacgaattt
     7081 ttatcagtcg ttattgagcc aagatttaat tgatgatacg ttcagctatc aaacagtcat
     7141 tgagcggaca tacagttttt cattaatcac atcggcaacg acagaacctg aacagttaaa
     7201 aacgttacta ttagacgaat tacgtgcacg aatcggtacc ttagatgacc aacacgcgtt
     7261 cgatttgtta aaacgtcaat ttattggtga atatatctcg agcttaaatg caccagaata
     7321 tatcgcgaat caatccacga agttttattt tgatggtgtg agtttatttg aattattgaa
     7381 tgtgatcgat agtattacgt tagatacgat gaatgaaacc gttcgccgtc gtatcgatat
     7441 gaatgcactt gtcgatagtc gtttggagat taaaaagcca tgaaagcaat cgtcatcggt
     7501 ggttctggaa caataggtcg tgcaataacg catgatcttc tttcaaatgg ttatgaagtg
     7561 attgtgacat atcatcacac tccgttagca actttgatgg atgaatttca agggcaacct
     7621 gtgcaatttg tgcaactgga tttgtctcaa cctgtaaatc tcgaggaaaa attaggtttt
     7681 gtgcgcaatt tagatgcact catttatgcg agtggtcata gtttatttgg catgctacaa
     7741 gatatgacag ataccgatat tcatgaagcg tatcaagtcc atgtttttca tttcattaaa
     7801 atgacacaat attttgttag ccaactcatt caaagtccac acggcagaat tgtagcgatt
     7861 tcgtctattt ggggtgaaac gggggctagc tttgaaacga tttattctag tatgaaagcg
     7921 gcacaaattg gttttgtaaa atcgttggcc aaagaattag ctcgtacatc agtgaccgtc
     7981 aatgcgattg cccctggtgt cgtcgcgggt tcaatgacgg atggtctcga tcatgcagca
     8041 cgtacagcat tgttagagga agtgcctcaa aatcgttggg ttgacccaaa tgaaattgca
     8101 cacgccacgc gctttttatt atcgccatta tcgcaaagtg taaccggtac agttcaacgt
     8161 atcaatggtg gttggtattg ctagtttgat ataatgggga ttaaagataa aagccactgt
     8221 tgacattaag ggggatttta atgattacac gagaaaaacg cgaatggtac ttagaatatc
     8281 aaattaatgt gaatcgtgca gggttattag gtgacgtttc gagtttatta gggatgatgg
     8341 gcataaatat cggaacgatt aacggtatcg atcagtccat tcgtgccttt attattaaat
     8401 cagatagcga agaaaagatt aaacgttttg agacattgtt aaaagaaatt gatgacattt
     8461 cgttaagagt gttacgcgag cctgaattga aagatagact tgcagtaaga cacggacgat
     8521 atgtaaaaca agacgaacat gacaaaaaaa tattccgttt tgaaagagat gatttagggt
     8581 tactcgttga ctttatggca gagttattta aagaagaagg acacaaattg atcggtattc
     8641 gaggcatgcc acgtgtcggt aaaacagaat ctatcgttgc gggcagtgtt tcagcgcata
     8701 aaaaatggtt gtttatcagt tcgacactta ttaaacaaac ggtgcgaagt tctttaatta
     8761 aaggtgaata cgataaagat catgtgtaca ttatcgatgg tgctgtgaca gcaagagaaa
     8821 cgaatccgaa acatcaggaa ctcgtgaaag aagtcatgac cttaccatct gtcaaagtag
     8881 tggaacatcc ggatttattt gttgaagcga gtgactatat tatggatgat tttgattata
     8941 ttatcgaatt gcgtgccgaa gaaaaccaag aaattgaata tgaagaaatg aaaaagaaaa
     9001 cagtcagaag taaaaataat ttagattttg gtgatacttt tggtggcttt ggtgacggtt
     9061 ttggtgatgg attcggttca ttgtaacgat ggagggaata acagatgcgg accattggag
     9121 aagtattaca aagcaaaaga gaacgtttag gtatgacgtt aactgaacta gaaaaaagaa
     9181 cgcaaattca acgagagacc ctcgtggata tcgaacaaaa tcgttttgat cagttcaaac
     9241 atccgaacca cattcgtggg tttattcaaa aatatgcaca atctgtcaat atcgatggac
     9301 gtatactcat ggaaaaacat catgaagaac tccctgcagt ccaacatcaa gcccacgtga
     9361 tattagaaca aatcgcccag caaaaagagg tgctaacttt tacacaaaca gatcaacaac
     9421 ctaaaaaagt ggcgatttta atcggtttat tgacagctgt tacagcggta ctttgggtgc
     9481 tcatgaccct tatgttataa taagcgtatc agatatagat tgagtgaaaa gaggagcaaa
     9541 catgaatata ccgaatcaga ttaccgtctt tcgtgttatt ttaatcccta tttttatgtt
     9601 atttgcactt gtagattttg ggatggggca agtgacattt ttgggaggac agccgattcg
     9661 tattgaattt ttaattagtg gaatcatctt tattttggcg tcgttaagtg actttttaga
     9721 tggttattta gcacgtaaat ggcaaattgt tacgaatatg gggaaatttt tagacccact
     9781 tgcagacaaa ctactcgttt ctgctgcact gattgttctc gtcgaacttg gtttaacgaa
     9841 ttcagtcgtt gcagtcatta ttattgcccg tgaatttgca gtgacaggat tacgtttatt
     9901 gcaaattgaa caaggttttg tcagtgctgc gggtcaatta ggcaagatta aaacggcagt
     9961 gacgatggtt gcattgattt taattttatt aggagaacct ttcagccagt ggattggttt
    10021 cagcttagga caggtgttat tatacatcgg tgtctttttc acagtacttt ctggtattga
    10081 gtatttttac aaaggccgcg acgtattttt acaagataaa aaataagcaa tgcacctatt
    10141 taaaaatgat gatgacaatg aagcaaccat cattttttgt aacaatattt cattgattaa
    10201 taacaaacat gaatggctag ggtcagtttc ctagtcattt ttttattctt tttagcgttt
    10261 ttctttttta taaaatagtg atgtaagata aaatgaaatg taatgaatac gacaatccac
    10321 acgaacgaga gatgggggac gaaaatatga aagtatgtat tatcgcagtg ggatcagaac
    10381 tgctgctagg ccaaattgtg aatatgaatg cgcaattcgt atcgcaaaaa tttaatgaag
    10441 cgggacatca tgtgttagaa catattgtag ttggagataa tgcgcaacgt cttgaaaatg
    10501 tgacaagacg tgctttacaa caatatgatg tgctcgtgtt tacaggggga cttggtccga
    10561 cgaaagatga tttaacgaaa caaacagtag cggaagtgtt gaataaagac cttgtcatga
    10621 atcaagaagc aatggattat ataaaagatt acttcaggca aaatggtaaa gttatgacac
    10681 cgaacaataa acaacaggct ttagtcattg aaggtgcaga agttttagca aatcaagttg
    10741 gcatggcgcc aggtatttac gtccggcatg acaatcaaca tatcgtgatg ttgcctggac
    10801 cacctaaaga acttcagcca atggtcgaaa atgaattgat gccacacttc tctcaaggtg
    10861 gtcaaacgat tgaatcagaa gtgttacgtt tttgcggtat tggtgaatca caagttgaaa
    10921 cggaactgat ggacttgatt gatgcacagt ccaacccgac gattgcgcca ttagcaggaa
    10981 cgcatgaagt gacaattcgt cttacagcaa gtggtgagag taaggaagta acaaagcagt
    11041 tgattgcacc gataaaacaa gaaatattaa aacgtatcgg attgtattac tatggctcgg
    11101 atgacatgac gcctgagcgt gctgttttac aattacaaca tcaaacgttt acggtatatg
    11161 accaagtgac agatgggtta ttacatgccc gtttgaagca agaagattca caacatttat
    11221 tgaaagggta tatgctacat cacccgcaat ttttagatgc atctgttgca attgaagatc
    11281 agctctattc agcggcgttg tttgtgcaag cactttatga cagcgaacag gccatcagca
    11341 tactgtcaca agataacatc gtttatattg gattattagc tggcgattca tttcaagtta
    11401 aaactattaa aatgacgcaa atgaggcatc tgcaacgtga cagaagtcaa aattatattt
    11461 taattacatg gttaaattgg ttaaaatttc ctgaaaacca gtcattaatt gatcaaatat
    11521 aagtacatgc gttctatttt ggagaaaatg cagttcgaaa attacgaaca aacattcgca
    11581 aaacacttgt aatttgattt aataccatgt atagtagagt taaattaaaa ggaaatttcg
    11641 atcaagtagg gggtcctaaa ttggataatg aacgtcaaaa agcgctagat acagtaatta
    11701 aaaacatgga aaaatcattt ggtaaaggtg ccgtaatgaa actgggcgag aataaagatc
    11761 gccgtgtttc aagtgtttca agtggttcgg taacgctaga ccatgcatta ggggttggcg
    11821 gctatcctaa aggtcgtatc atcgaagttt atggccccga aagttctggt aaaacaacgg
    11881 ttgctttaca tgccattgct gaagtacaaa aaaatggcgg tgttgccgca tttattgatg
    11941 ccgaacacgc actcgatcca gtttacgctg aagcattagg tgtagatatt gataacttat
    12001 acctttcaca accagaccac ggtgaacaag gtcttgaaat tgcagaggcg tttgtcagaa
    12061 gtggtgcagt ggatattatc attgttgact cagttgcggc attgactcct aaagctgaaa
    12121 ttgaaggtga aatgggtgat acgcatgttg gtttacaagc gcgtttaatg tctcaagcat
    12181 tgcgtaaact ttctgcagcc atttcaaaat caaaaacaac agctatcttt attaaccaaa
    12241 ttcgtgaaaa agtaggcgtt atgttcggta accctgaaac gacaccaggg ggccgagctc
    12301 tgaaattcta cagctcagtt cgtttagaag tgcgtcgtgc tgaacaattg aaacaaggtc
    12361 aagatattgt aggtaaccgt actaaaatta aagtggttaa aaataaagtc gcaccaccat
    12421 tcaaagttgc agaagtggat atcatgtatg gtaaagggat ttcacgcgaa ggcgaattga
    12481 ttgatttagg tgtacaatac gatatcgttg ataaatcagg tgcttggtat tcatataacg
    12541 gtgagcgtat gggtcaaggt aaagagaatg taaaacaatt cctacttgaa aaccctaaac
    12601 ttgaagatga aattgaccgt aaattacgtg aaaaactcgg catttatgat ggtgatgtag
    12661 aagaatctga acaagaagaa acacaaacac tttttgatga ataacaatgt ttaaaattca
    12721 ttcgaaaagt actgtgttca ataaaaaagc gatgcgggca ggattcattc attctgtgtt
    12781 catcgctttt tctttgtaat cacgacagaa accttgattt ttcgttgttc aaaacgtaca
    12841 attgaacttg tatgattctt atttttatcc atataatcat atagatttat taacatacag
    12901 aacgaaatcc tagaaaaagg aggtgtttgt gtgaatttat taagcctctt actcattttg
    12961 ctgggtatca ttctaggagt tgttgtaggg tattttatcg cccaaaactt gatttaccaa
    13021 aagcagttgc aagcgaagca aactgcgaaa gatattcttg aacaagcaaa caaagaagca
    13081 gaaaacctta aaaaagagaa gttaatcgaa gcgaaagaag aaaaccaaat tctccgagaa
    13141 cgtgttgaaa acgaacttag agaacgacgt actgagcttc aaaggcaaga atcccgactt
    13201 cttcaaaaag aggaaaactt ggagcgaaaa tctgatctac ttgataagaa ggatgagatt
    13261 ttagagcaaa aagaatctaa acttgaagaa agacaacaac aagtagatgc aaaagagagt
    13321 agtgttcaat cgataataat gaagcacgaa caagaactag aacgcatctc cggtctcaca
    13381 caagaagaag cacgtaaaga gcaattatca cgtgtagaag atgagttgtc acaagatatt
    13441 gcagtacttg ttaaagaaaa agaaaatgaa gcaaaagaaa aagtaaacca aaatgctaaa
    13501 gagttgctcg ctacagtagt gcaacgtttt gctgcagatc atacttctga atcaacagtt
    13561 tcagtagtaa acttgcctaa tgatgaaatg aaagggcgaa ttattggtcg tgaaggtcga
    13621 aacattcgta cattagaaac gcttacaggt attgatttga ttattgatga tacgccagaa
    13681 gcagttattt tatcaggttt tgatccgata cgtcgagaaa ttgcgaaaac agcattaatt
    13741 aatctagtat cagatgggcg tattcatcct ggacgcatag aagatatggt tgaaaaatca
    13801 agacgtgaag tagacgaaat tattcgtgac gctggtgaac atgcaacatt cgaattaaat
    13861 gttcataata tgcatccaga tttaattaaa atattaggac gtatgcatta ccgtacaagt
    13921 tacggtcaaa atgttttgaa acattctatt gaagttgcac atctgtcagg tatgctcgct
    13981 gcagaactga atgaagatgt gacattagcg agacgtgcag gtttattaca tgatattggt
    14041 aaggccatcg accatgaagt ggaaggcagt cacgtagaaa tcggtgtgga gttagctaaa
    14101 aaatatggcg agcctgaaac agtgattaat gcgatacact ctcatcatgg tgatgtggag
    14161 ccaacttcta tcatttcaat tttagttgct gcagctgatg cattatctgc tgcaagacca
    14221 ggggcaagaa aagaaacatt agagaattac atcaagcgtt tagagcgttt agaagaaatc
    14281 tctgagaatt atgaaggtgt tgaaaaggcc tttgcgattc aagcaggtcg agaaattcgt
    14341 gttattgtag aacctgatac gattgatgat ttaaaatctc accgtttagc gcgagatata
    14401 aaaaatcaaa ttgaaggtga attgcaatat ccgggtcata tcaaagtgac agtcgttcgt
    14461 gagacgagag caattgaata tgcgaaataa ttgcgtatga aaacgaaaag caagtttctt
    14521 tattaaaggg tataaagaaa cttgcttttt tctgtgcgtt aagtactgtt tgttgttaac
    14581 attaaagact cattacaaaa tcatatgatg tcttatctat aaagatttaa ttctgtctct
    14641 ttcaacgctt ccaatgcact tgcggtatca tagcaatttg aagaaatatt cgtgtagcgt
    14701 tctgccatac gataggcgtg aatatacaaa tcaatacttt cttttgcaat ttcttcaggt
    14761 tttaactttt tagacggatt tgcgctcact acaagttctg caaatttttc tggatcaata
    14821 tgaattgaca taaattataa aacatctcct agtttttgtc ttatacctca cttatgattg
    14881 aatcgaacca taagtcttcc taaaagtgca ttaccctctt cgttatcaat taatcatatt
    14941 tttcattcaa gcaaatactt gaatgttctg tgaaaagaag ttataatttt aatgtaaaaa
    15001 taatatataa gaaggatatg aagatgttat gaatcaaaaa attgcaactt gtgatacttt
    15061 tagtattgac gttgaagctg tacaacagtc aaaagaggag attgccgctt cgaatattga
    15121 acaggtgagt caaatgttta agagtattgc cgacattaac cgctctaaaa ttgtcctcgt
    15181 gctttgtcat cataatgaat tgtgtgtttg tgatattgcg gaaattttaa atgtaaccgt
    15241 tgctaatgcg tctcaccacc tgagatctct ttataaaaac ggcattgtga cttttcgcaa
    15301 atcaggcaaa cgtgcatttt atcgtttgta tgatgaacat attcgacaat tgatgatgat
    15361 atctattgaa cataagaaag aagtggatga gaatgattca aagtcgtaaa acttacagaa
    15421 tagaaggttt atcatgcgcc aattgtgctg ggaaatttga aagaaatgtc cggggtcttg
    15481 cgtcagttga agaggcacaa gtcaattttg gtgcttcgaa aatttatgta acgggcgacc
    15541 caactgtaga agaattagaa ggggcgggcg catttgaaaa tttaaaattg acattagatg
    15601 agcggaaaaa gattagtgcg aacgctgacc gaagcacaat ggcgcaaccg acctcttggt
    15661 ttgataaggt caaacagttt tataaagcgc atcaatctat atgtgtagcg acgttgttca
    15721 tgctacttgg ttacatttca catttgatga gcggcgaaaa ccatttgatg acaattttac
    15781 tattcgcttg ttcgatatta ttaagtggaa gcgcgctact catccgtggt gttaaaaatt
    15841 tagtgcatgt tgaatttgat atgcatacat tgatgacgat tgcggttatc ggtggtgcaa
    15901 tcattggtca atggggagaa gttgcagtgg tcgtcatttt atttgcgatg agtgaggcac
    15961 ttgaaacgtt ttctatggat aaagcacgtc agtcgatgca atctttaatg gatatcgcgc
    16021 cagatgaagc gacagtttta agggacggtc aacatgtaaa gatacctgtg gatgacattg
    16081 taatcggtga aaagttatat attaaaccgg gacaaaaaat tgcgttagac ggtgttgtcg
    16141 ttgagggccg tgctgcagtg aatcaggccg cgattactgg tgagtcgatg ccggttgaaa
    16201 aagtgggagg tgcagaagtt tttgctggga cattgaatga agatggcatc cttgaagtgc
    16261 gtgtcacgaa aacagcagca catacgacat tagcgaaaat gattcaactc gttgaagaag
    16321 cacaattaaa tcaaacacca gcacaagcat tcattgaaaa gtttgcgcgt tattatactc
    16381 ctgccattat ggttatcgcg ttactcgttg cgatagtgcc gccagtagtg ttacatcaat
    16441 cgtttttaac atgggtttat caaggtttgg ccgtgcttgt tgtcggctgc ccttgtgcgt
    16501 tagtcattgc aactccaatt tctatcgtat caagtattgg taatgcagca aaaaatggtg
    16561 tgctcattaa agggggcatc cacctagaac aaatcagtcg tgttcgtgcg ttagcttttg
    16621 ataaaacagg gacactgacg aaggggcacc ctgaagtgac cactgttctg ccattaacag
    16681 agatgcgtga tgacaccgag ctgattggtc aaattgcagc tatcgaaagt cgttcggatc
    16741 atccgttagc acgggcaatt gttcgttatg ccgaaacaaa gcatcaccat tttgattcat
    16801 atgatgtgac agattttcat tcacaaacag gccaaggggt gagggcgaac gttgaagggc
    16861 gtcaattcat cattggacaa ccgcaaatgt ttaaaatggc gcaatcgacg atgaaaacgc
    16921 aaattcaaca attacaagag caaggaaata cagtcattct cgtgtcagtg gatgatgtgt
    16981 tacgtctatt aattgcagtg cgagatgaag tgcgtgaaca gtctcaaaaa gcgatacaga
    17041 cgcttcatga gcttggcatt caacataccg ttatgttgac aggagacaat gagaaaacag
    17101 cacgagcaat tgcgcaaaca cttcacatgt cagatgttaa agcagatttg atgcctgttg
    17161 ataaattaaa tgaaattgaa cagcttaaac agcaatatgg gacagttgcg atggtcggtg
    17221 acggggtgaa tgacgcacca gcactggcga gcgcatcagt gggtattgcg atggggggtg
    17281 cgagtacaga taccgcactt gaaactgcgg acattgcact cctcagtgac gatatgtcga
    17341 agttaccttt tacatatcgt ttgagtcaaa aaacaatgcg tatgattaag gcaaatatta
    17401 cgtttgcaat tgcgattaaa ttattagcgt tgttacttgt gattccaggt tggttaacgt
    17461 tgtggattgc ggtattttct gatatgggtg caacattgat tgtcgcttta aatgcaattc
    17521 gtctcctgta tgttaaagca gataatactg aggtgacgac agagtaaatg atatagccgt
    17581 aatgactaaa aatcttcaaa atgaagttag cgctgccttg atgaagtatg ataaaaaggt
    17641 tcgcgtcaac tggcgacgac aattttacgc gcatacattg acatcgatgg tgagaacggt
    17701 acaataaaac gtatcaacat acatgtaaaa tcgtgatgtc aagcagttca aacatgacga
    17761 tgaacaaggg acgtgtcatg acaaaaatgt tgatgagacg tctcttttat aatgtttttg
    17821 catctcccca gtgataaggt tgctatttaa aaaacgataa agaatagcga ttaaggggat
    17881 tagagaggac gaaaaatatg aggattttat ttataggtga tattgttggg aaggtcggtc
    17941 gccaaacgat ttcagagctg ttaccgaaac tcaaacaaca ttatcgtcct acgttaacga
    18001 ttgtgaatgc tgaaaacgca gcacacggca aagggttaac tgaaaaaata tataagcagt
    18061 tgttacgtga aggtgtcgat tttatgacga tgggcaatca cacgtatgga caacgtgaaa
    18121 tttatgattt tattcatgag gcgacacgtc ttgtgcgacc agccaatttc ccagatgaag
    18181 caccaggcgt tgggatgcgt atccttcaac ttaacgctaa aaaattggca gtcatcaacc
    18241 tgcaagggcg tagttttatg ccaatgattg acgatccatt taaaaaagca gatcaactga
    18301 ttgcagaagc tgaaaaagaa gcggattata tttttgtcga ttttcatgct gagacgactt
    18361 cagaaaaaaa tgcgatggcg tggtatttag atgggcgtgt gagtgcaatt gtaggtacgc
    18421 atacccatat acaaacgtca gataatcgcg ttttgccaca aggaacggca tatattacag
    18481 atgtcgggat gacggggtat tatgacggta tattaggcat taaccgcgat gaagtcatta
    18541 agcgttttat tacgagttta ccgcaacgcc atgttgtgcc ggatgaagga cgaagcgtat
    18601 tgtcaggtgt cattattgat ttaaaagaag atggcacagc gaagaaaatt gatcgcattt
    18661 taattaatga agatcatcca tttgaagcgt aatcatataa atacgttcaa aaagtggctg
    18721 aattgtgata tatccctatc cgccattagt atgaattttt ttcaaaccca ctattttgta
    18781 aagcaaatgg tgggttattt tgataaaata ttgagtgaat tcaaacgtgt aggaggctaa
    18841 atctatgaaa tctcaattat catggaaagt gggaggtcag caaggcgaag gtatcgaatc
    18901 aacgggtgaa attttcgcta ctgctatgaa ccgcaaaggc tattatttat acggttatcg
    18961 tcatttctca agccgtatta aaggtggtca tactaataat aaaatccgtg tttcgacaac
    19021 acctgtgcat gccattagtg atgatttaga tattctggta gcgttcgacc aagaaacaat
    19081 tgtgttgaac catcacgaaa tgcgtgaaga tagcgtcatt ttggcagata gtaaagcaaa
    19141 accagagaag ccagaagata gtaaggcgca acttatcgtc ctaccattta cagaagtggc
    19201 taaagaatta gggacgactt taatgaaaaa catggtagcg attggtgcaa ctgcggcatt
    19261 aatgcactta aatacggata cttttgaatc gttaattacg aatatgttcg agaaaaaagg
    19321 tgaaaaagta gtcgacttaa atattcaagc attaaatgaa ggctatcgtt taatgcaaga
    19381 acaaatgggt gaagtgaacg gagactttga attagaagaa agtagcggcg tacctcacct
    19441 ttatatgatt gggaatgatg cgattggttt aggtgccatt tcagcgggct caagatttat
    19501 ggcagcgtat cctatcacac cagcttcaga agtcatggag tatatgattg acaatttacc
    19561 taaagtaggc ggttcagtca ttcaaacaga agatgaaatt gcagctgcaa cgatggcgat
    19621 tggtgcaaac tacggcggtg tacgtgcctt tacagcatca gcgggtccag gtttatcatt
    19681 aatgatggaa gcaataggtt tatcagggat gactgaaaca ccatttgtag tcattaatac
    19741 gcaacgtggt ggcccatcga caggtttacc gacaaaacaa gaacagtctg acttaatgca
    19801 aatgatttac ggtacacatg gtgatattcc gaaaattgtg cttgcgccaa cagatgcaga
    19861 agacgcattt tacctaactg tagaggcatt taacttagct gaagaatatc aatgtccagt
    19921 catcttatta agtgacttac aactgtcatt aggtaagcaa actgtgaaag cactcgatca
    19981 ttcaaaaatt gaaattcgtc gaggtgcaac gattacggaa gacattgaaa gagatgagga
    20041 cgacaaagac tacttcaaac gttatgccgt tacagaatct ggcgtatcac cacgtccaat
    20101 tccgggtgtt aagggtggca ttcaccacgt gacaggcgtc gagcataacg aagaaggtaa
    20161 gccgagtgaa gcagtagaaa atcgtcaaaa tcaaatggat aaacgtatgc gcaagacaga
    20221 aaaattagtc attccaaaac cggtagaagg tacaacaaca catgatgatg cggatatttt
    20281 ataccttgga tttatttcaa caaaaggtgc aatccaagaa gggactttac gtttagaaca
    20341 acaaggctac cacattaacc atttacaaat tcgacaatta catccattcc caacagaagt
    20401 cattcaagat gctgtggata aagcgaaaaa agtcgttgtt gttgaacata actatcaagg
    20461 tcaactggca aatattatta aaatgaacgt gaacttaggt gacaaactca tcaaacaaac
    20521 caaatatgat ggtacaccat ttttaccaca cgaaattgag gataaaggtt tagaaatttt
    20581 gaatgcatta aaggagagag tgtaattggc tacgtttaaa gattttagaa ataatgtgaa
    20641 acccaattgg tgtccaggct gtggtgactt ctcagtacaa gcggctatcc aaaaagcagc
    20701 tgcaaacgtt ggattagaac cagatgaagt agcactcatt acagggattg gttgttcagg
    20761 acgtctttca ggttatgtga actcatacgg agtccattcc attcatggtc gtgcattacc
    20821 acttgctcaa ggtgtgaaaa tggccaatcg tgatcttact gttattgctt ctggtggtga
    20881 cggtgatggt tacgctatcg gtatggggca tacaattcat gcgttacgcc gaaatatgaa
    20941 tatcacttac atcgtgatgg acaaccaaat ttacggcctg actaaaggac aaacatcacc
    21001 ttcatcagca ccaggtttcg taactaaaac aacgcctaaa ggtaacatcg aacaaaacgt
    21061 ggcaccgtta gagttggcat tatcttcagg agcgacattt gttgcgcaag gtttctctag
    21121 tgatattaaa gcgttaacga agatcattga agatgcgatt aatcacgatg gtttttcatt
    21181 tgtcaacgtt ttttcaccat gtgtcacata caataaaatc aatacgtatg actggttcaa
    21241 agagaattta actgctattg atgatattga aaattatgat gtcagcaata aacaagctgc
    21301 actacaaact gtgattgagc atgattcatt agtgaaaggg attgtctacc aagatacgac
    21361 aacaccttca tatgagtcac aaattgatgg cttagcagaa accccattag cacatcaaga
    21421 cttgaattta acagaagagc agtttgagtc atttacaaag caatttatat aaaaagtttc
    21481 atatatttaa gcgtattcac gcacactaaa tatcgtacta ataataaggc tagggtcgca
    21541 catgtgccta gtcttatttt tttgtatcac tttcaaccat taaatgaaag ttaagaaaat
    21601 tatagtcttt tcgtagctta aaaatagaag tcaaatcaat ggcaaatgca aacctaccaa
    21661 ctgaaagacc tttatttttg caacgtgatg taatcaaagt cataataaaa tgtattaagg
    21721 aggttttcat atgatagata cgttaatgag cattcaaatt atcccacaaa cacctcatgg
    21781 agaagatgtg atcccttttg tggatgaagc gatcaaagtg atagatgaat caggcttaaa
    21841 ttatcgcgtc ggaccattag aaacaacgat tgaaggcgaa atgagtagtt tattaatctt
    21901 aattcaaaaa atgaacgagc gtatggttga actcgaatca ccaagcatta ttagccaagt
    21961 gaagttttat catgtgactg aaggtattag tatcgaaacg ttaacgggca agtatgacga
    22021 aatggcttaa tcaattgcac aacttcaatt gaatttacaa gatatcattt tgcacttttc
    22081 ctagattttt aatataatga actaatgata tatgggcaga aagggttttg catgtgaatg
    22141 aagaacaaag aaaagctgga acgattgatg tcttagcgca acgtgacagt aaagaagaaa
    22201 aagattatag taaatatttt aattttgaac acgtttatca accaccaagt cttaaagacg
    22261 cgaaaaaacg tgggaaagaa actgtgcaat ataaccgtga tttccaaatt gatgagaaat
    22321 ttcgcggtat ggggaaaggt cggacatttt taattaaaac atatggttgt caaatgaatg
    22381 cgcatgatac agaagtcatg gcagggattt tgacagcttt aggttataca ccgacagaag
    22441 atgtgaatac ggccgacgtt attttattaa acacgtgtgc tattcgtgaa aatgcggaaa
    22501 ataaagtgtt tggtgagatt gggaacttaa agcatattaa gcaagagcgc ccagattgct
    22561 taattggtgt ttgtggatgt atgtcacaag aagaatctgt tgtgaataaa attttaaaat
    22621 cataccaaaa tgtcgatatg atttttggta cgcataatat tcaccgctta ccacaaattt
    22681 tagaagaagc ttatttatct aaagcaatgg tggtagaagt atggtctaaa gaaggcgatg
    22741 tcattgagaa cttacctaaa gtgcgtcaag gccgtattaa agcatgggtg aatattatgt
    22801 acggttgcga caaattttgt acatattgta ttgtgccgtt tacacgtggt aaagagcgta
    22861 gtcgtcgccc agaagatatt attgaagaag tgcgtgatct agcacgtcaa ggctatcaag
    22921 aaattacatt gctcggccaa aacgtgaatg catacgggaa agacatcgaa gatcttgagt
    22981 atggtttagg cgatttattg gcggacattt caaaaattga tattccgcgt gttcgcttta
    23041 caacaagcca tccatgggac tttacagacc gtatgattga agtcattgct gaaggtggta
    23101 atattgtgcc gcatattcac ttgccggtgc aatcaggtaa tgaccaagtg ttgaaaatta
    23161 tggggcgtaa atacacgcgt gaaagctatc ttgatctcgt agcacgtatt aaagcagcaa
    23221 tgccagatgt tgctttaaca acagacatca ttgtaggtta cccgaatgaa acagaagcac
    23281 aatttgaaga aacgttatct ttatatgaag cagtcggttt tgaacatgcc tatacgtatc
    23341 tttattcaca acgtgacggt acacctgctg ctaaaatgaa agacaatgta ccgactgatg
    23401 taaagaaaga gcgtttgcag cgtttaaacc gtcttgtcgg tgaatattct tcacgtgcat
    23461 taaaagcgta tgaaggtgaa acagttcgcg tattatgtga aggtgcaagt aagaaagatg
    23521 aagcagtttt agcggggtac actgaaaaga acaaattagt caacttccgt gcgccaaaat
    23581 ctgttatcgg taaaattgta gatgtcaaaa ttgttgaagc gaaacaatat tcattaaatg
    23641 gtgaatttgt aggtgtgagt gaaacaacga tggtgacggt atagatgtat tcacgtgaaa
    23701 tgattttgga atcggctcaa aagttaagtg catccattca atcattagaa acgatacaac
    23761 attaccaacg gattgaaaca caaattcatc aaaatgagca aattgcgcaa tatatggcag
    23821 agttaaagca aaatcaaaag caatccgtta atctacaaaa ttacgataag cctgtcgctt
    23881 ttgcgcgctc tgaagaaaaa attgaagaaa tacaaaccaa aatcgatgga atcccaattg
    23941 tgaatgaatt taaaaaggca caacatgaag cgaacgaact gttacatgtt gtgattggga
    24001 ctttatcagc tagaattcaa caagaaaata tcgaggctga ggacgatcaa acgcacgaat
    24061 gatataagtg gatagagtgg ataaattgcc ctcagctctg tcggagagtg ataagtttga
    24121 acacacgtaa actaacactg accgctctct ttattgcagt caatgttgta ttaagcacag
    24181 tgattgtcat accattaggg gcgattaaag cagcacctgt acaacatttc gtgaatgtac
    24241 tcagcgtcgt cattcttgga ccatggtatg gactcgcgca ggcattttta tcgtcgtgca
    24301 tacgcgtaat gtttggtacg ggtacaccat ttgcctttcc aggaagcatg attggggtct
    24361 tactcggaag tttattttac tatgtgaacc gacacctgtt tgtcgctgct attggtgaag
    24421 tgattggcac aggaattatt ggcagtttag tttgtattcc actcgcttgg attttaaatg
    24481 tcgatcactt tttaattaag cctttaatgg cagcgtttat cgtttcaagc atgatcggcg
    24541 catccataag ttacgcgttg ctcattttgt tgaaacgacg aggcgtatta aagcatttag
    24601 atttaaatcg aaagtatcga aaataacaat tgaacgatga aagcagtgtg tgggtaggat
    24661 tgacttagaa gtagaacaca tgaaagatga ggggctgggg gcttaaacaa cgcgtttata
    24721 ctctcagcct tttatgctta attttatttg gaagattgat cctacctttc ggtttgctga
    24781 actttccatc gctttcctag ggggcggctc ttcaactaaa tttggcttga ttgaagtaaa
    24841 aattttgtag aagccaaatt ggattttccg agccaccttg atccctcagg agtctcggaa
    24901 agttcttgca aacctgaatg attccaccaa tcaaatgata agctaaagtc tgagagtgat
    24961 tttggatggg atagaatata gtgagctgaa cttcccatcg cgttcctagg ggctgtgcgt
    25021 caattcaatt tggcttgatt gatgtttaca ttcgaaggac gctaaattgg attttcgaaa
    25081 gcagtataga aatctgacgt gcaacaaaga tttcgtcgta ctccccccgc taggctgacg
    25141 cgacttctca aaagcatagg cattgagcag tcaggcagct actgcgttaa acaactaccg
    25201 ctcaaaaaat gaagagacaa taatatgatt taaacactag gccctcagaa gtcgtgtatg
    25261 gttcttgcaa tcaaatactt agttaaagtc tgagcggatt ttgaatggta cgaaaatgag
    25321 cactgctaca ttacttaaaa gtgattcaat ggtctagaac ggagatccat caattgtttt
    25381 tttgatgaaa tgcaagtttt ttatgatcat tattaatatt catacataga gggctgcttt
    25441 tgtagcaaag tattacataa actcaaataa aggaatgtga gaaatatatg tcaaatgtca
    25501 cgccaatgat gaagcaatac ttgagtatta aagcacaaca tcaagatgct ttactgtttt
    25561 ttagacttgg tgatttttat gagatgtttt atgacgatgc gattacggcg tctcgtgtgc
    25621 ttgaaattac attgacgaaa cgcgacgcta aaaaagataa tccgattcca atggcgggtg
    25681 tgccttatca ttctgcagat agttatattg aaacgttaat tcagaatggg tataaagttg
    25741 cgatttgtga acaaatggaa gatccgcgcc aagtgaaagg gatggtgaaa cgtgaagtcg
    25801 ttcgtatcat tacgccaggt acagtgatgg aaaaaggtgg cgtggatgat acacaaaaca
    25861 actatatttt aagttttgtg aaggcggatg gttatgcgct aagttattgt gatgtgtcca
    25921 ccggagaatt aaaggtgacg cattttgaag atgaaagtac gcttattaat gaaattacga
    25981 caattcgccc aaatgaaatt gtcgtgactg aaccattatc agaaacgcta caacgtcaac
    26041 tgaatatgat tacagaaacg attactgtcg ttgaacaagt ctcagatcaa aattattctg
    26101 tgaacagttt gtcacatcct ttaatgcatc aagcgataca aattgtgtta gattatattt
    26161 atgatacgca aaaaagagat atgtctcata ttgaagcggc tgttgaatac aaggcactcg
    26221 attatatgaa aatggattac tatgcgaagc gtaatcttga gttaacagaa agtattcgtt
    26281 tgaagtcgaa aaaagggacg ttactttggt taatggacaa gacgaaaaca cctatgggcg
    26341 caagaaggtt gaaacagtgg gttgatcgtc cacttattca acaagctgaa attgcgaaac
    26401 gacatgatgc tgtcgatcaa tttttacatt atttcattga gcgtgacacg ttacgtgact
    26461 atttaacgga agtatacgac attgaaagac ttgtcggtcg tgtcagtttt ggaaatgtca
    26521 atgcgaaaga tttagtgcaa ctcaaacatt caattgcaca aattccagcg attaaagcgc
    26581 tattgcaatc aattgaacat gaagctattg ctcattttaa tgctttagaa ccgttggatg
    26641 acttactgca agtgttgtcg gacagtcttg tcgatgaacc accgctttca gtgaaagaag
    26701 gcggtttgtt taaagcagga tttaatgaag aactcgatca atatttggat gcttcgaaaa
    26761 atggtaaaca gtggttggcg caattacaag cacaagaacg tgaacgcaca ggcattaaat
    26821 ctttaaaaat tagttttaat aaagtatttg gctattatat cgaaattaca cgtgccaatt
    26881 tatcacaatt tgatccgagt gcatttggtt atgagcggaa acaaacatta tccaatgcag
    26941 agcgtttcat tacggatgat ttgaaagaaa aagaagcaat tattctcggt gcgcaagaca
    27001 aagcgattga actcgagtat caattgttcg tggcgttacg tgaacaggta aaaacgtata
    27061 tcgaacgttt gcaacaacaa gcaaaaatca tttcagaaat tgactgttta caaagttttg
    27121 ctgaaattgc gcaacagtat aattacgtgc gaccacaatt tagtgaagat aaaacgttaa
    27181 acttagtcga ttctcgtcat ccggttgttg aacgtgtgat ggactataat gattatgtgc
    27241 cgaatgattg tctattaaat acagagcagt tcatttattt aattactgga ccgaatatgt
    27301 caggtaaatc aacgtatatg cgtcaagtgg cgattattag tattatggca cagatgggcg
    27361 cttttgttcc ttgtcaatcc gcaacgttac cgattttcga tcaaattttc acacgtatcg
    27421 gtgcggccga tgatttagta tctggtaaaa gtacgtttat ggtcgaaatg ttagaagcac
    27481 aaaaagcatt aaaatatgcg acggctgaca gtttaatcat ttttgatgaa attggacgtg
    27541 gcacttcaac atatgacggc ttagcactcg cacaagcgat gattgaatat gttgcagaaa
    27601 cgtcacaagc aaagacatta ttttcaacgc attatcatga attgacagag cttgaacaac
    27661 atttgccaag tttgaaaaat gtacacgtgg cagcggatga atatcaaggt gaactcattt
    27721 tcttgcataa agtgaaagac ggtgcagttg ccaatagtta cggcattcaa gttgcacaac
    27781 tcgcagactt accagaacaa gtcattgcac gtgcacaagt gattctggat acgtttgaag
    27841 cgcatgaaaa agcacaagtg acgtatacat cgaccgtgga ccaaaagtcg gtcagtccaa
    27901 caagggtaaa agcgtcgaca gttgctgaag agccgccgca atttgaacag ccgacgtttg
    27961 atttatttgc atctgaagct gaagtaagtg aaatcgagct tgaaatcaag caactgaatc
    28021 tttctcaaat gacaccgatt gaagcattag tgaaattaag cgaacttcaa aatagattac
    28081 aatagaaggt gaagagctta tgggtaaaat taaaacgtta cacacctcat tagcaaataa
    28141 aattgcagcc ggcgaagtgg tcgaacgtcc aagttctgtc gtgaaagagc tgttagaaaa
    28201 cagtatagat gctggtgcga ctgaaattaa tattgaagtg atggaatcag gaattgcctc
    28261 cattcgtgtg gtcgataacg gctcgggtat tttacaagat gatctaggtc ttgtatttca
    28321 tcggcatgcg acgagtaaat tagtagaaga tgatgacctg ttccatattc gtactttagg
    28381 ttttcgtggt gaggcactgg cgagtattgc ttctgtcgct aaggtgacgc tacaaacatc
    28441 gacggatggt gtggacggtt atgaagtgta tgctgaagag ggcgaaatca tttctgaaaa
    28501 gcctgccaaa gcgcgaaaag ggactgacat tcgtgtagat gcactatttt ataatacgcc
    28561 agcacgctta aaatatatta aaagtttata tacggaacta ggcaaaatta cagatattgt
    28621 caaccgtatg gccatgagtc atccagacat tcgcattgcc ttatcgaatg atgggaagaa
    28681 gattttacag acgaatggtt caggacgcac gaatgaagtg atggctgaaa tctacggcat
    28741 gaaagtcgca cgtgatttaa tccgcattga aggagatacg agtgattatc atataacagg
    28801 ttatgtcgca aaaccggaac attcaagaag taaccgtcac tacatttcat tgtttattaa
    28861 tggtcgctat attaaaaact ttttgttaaa caaagcagta caagaaggct atcacacatt
    28921 aatgatgatt ggccgttatc caatagtcta tttaaatatt gaaatggacc cggttttagt
    28981 tgatgtgaat gtgcatccga cgaaattaga agtacggttg tcaaaagaag atcagttgtt
    29041 tgatttaatt gtagcgaaaa ttcgtgaagc gtttaaagac caattgctca ttccgaaaaa
    29101 tgatttaaaa tcaaaatatg agccgaaaaa agtgctagaa caatttgaac aacaaaaaat
    29161 ggcatttgac caaaaacaag cagcacaaac acagacatcg cattcaaaca aagaaatgac
    29221 gattgacgaa gaacctgcac catacacaga tgtaatagaa ccgtcagata cggctaaaac
    29281 accagcaaca tcagaaacaa acgatgatta cgctgaacgt caacgcgcat tgttaaatga
    29341 tatggtggat gcgccatcac ctacaaatga agtgaactcg actgacgaca gttcaaacgg
    29401 agcaaccgtt tctgaaatac aacaaaatca tccacaacca tcagacaaac caaggcgacg
    29461 tgtgccctac atggaagtgg taggtcaagt tcatggcacc tatattattg cgcaaaacga
    29521 tgaagggatg tatttgattg accaacatgc agcacaagag cggattaaat atgaatatta
    29581 tcgagataaa attggtgaag tcaacaatga aaaccaaagt ttgcttattc cattaacgtt
    29641 taactttacg aaagatgagc aactgattat tgagcaacac ctcgacccgt tacgagaagc
    29701 aggcatcttt ttagaaccat tcggcggtca tgattacatt gtggacagtt atcctgtatg
    29761 gttcccgcaa gaaaacgttg aagagatgat taaagacatg atcgagtatg tcattcgtca
    29821 taaaaaggtc gacattgcga agtttagaga agaagcagcg attatgatga gttgtaaaag
    29881 atcgattaaa gctaatcact accttaaacc aaacgaaatg gcagacttaa tcgatcaatt
    29941 aggcgaaatg gaagatccgt tcacttgccc acatggcaga ccggtcatta tcaatttttc
    30001 gaattatgaa ttagagcggt tatttaaacg gattcaataa aggagggcat catgaagcca
    30061 catattttac cagccatacg atcaacaaaa gatttagaaa agttattgaa aacagattat
    30121 gaaacgtgtg tcctactcga tacacatatc ggacatctca atggcatcat gaaattaatt
    30181 agccaatatg agttaaaacc gtttatgcat atcgatttaa ttaaaggtat gagtcacgac
    30241 gaatatgctt gtgaatatat tatccaaact tatcgtccac gtggcattgt gtcgacaaaa
    30301 acaaaagtga ttaaaaaggc aaaagcatta ggtgttgtaa cgatttttcg tgtgtttatt
    30361 attgatagtc acgcattaga gcgcagtatt gaactgattc agcggattga accggactat
    30421 gtcgaagtgt tgccgggtat tgcagataaa gtgattcaag agattcatca aaaaactgga
    30481 acacccgtta ttgcaggcgg cttaattaac acgccagaag aagttgaacg tgctgtcagt
    30541 agtggcgctg cctacattac gacaagcgat aaatcattat ggtaaatgtc atataaataa
    30601 gggggaattg tgatgataaa accgcagaaa ttaaaaaaag gggatacgat tgcgattgtt
    30661 tctccttctt cagggttggc tggtgaacct caagttcgtt ggcggacgga acaagggatt
    30721 gagaatattc aaacactcgg ttatcatgtc aaagtgatgg ataatagttt gaatggcatc
    30781 gaatggaatt ttgaacatcc gaaagaacgg gctgaaatac ttacagcggc atttgttgat
    30841 tctgaagtac aagcgatttt atgtacaatt ggtggttatg agtctgtgcg cattattccg
    30901 tttttagacg atgaagtgat acgtcaacat cccaaaattt tcatcggtta ttccgacatt
    30961 acacctcttc atttacacat gtacaaactg gggattacct ctttttatgg accggcatta
    31021 ctcactgatt ttgcagaaaa tgttgaattg gacgcatata cagtagatca tctattttcg
    31081 gcgataggcg atacacaacc gattggcaat attccgactt ctgatgaggt gcgcgtgttc
    31141 ggattgcgtt gggaggaaga caagcgtcat attgcacgtg aaaagatgcc taatggtgat
    31201 tatatgcaca ttagcggtca tggtacagcg caaggccagc tcatcggtgg atgtttcgag
    31261 tcgttagata aactgagagg cacaccctat tttccgaagc tcgaacattt caaagggaag
    31321 attttatttt tggaaacgtc agaattgcaa gtggacccta tgagttttga ggaaacatta
    31381 cgtgcattcg gcttaatggg gatttatgat gttgtctctg gaattgtgtt gggacgccct
    31441 caaaatggtg tccatcaaga ggcgtatcat gacaaacttc gtcttattat gaaagagttt
    31501 catcaagcaa cactgcctat tataggtaat gcaagttttg gacataacga accgaaatgt
    31561 acattacctt atggcgttca agccacatta tcagtagata cgttatcgtt aagtattgac
    31621 gaagctgcgg tagtgaatta aaccttcaat cgttgtcata tttaaaaatc aaaactgaaa
    31681 ataattgcga aagtacattg tcacagtata aaaaatatta ataaatttgt taataggctc
    31741 taaagtgttg acaacgcttt cacgtcattg taatattatc tcaagttgat atttagctag
    31801 agactaggag acttctgctc gcgtttgaat gttttttcat gcggattgga gtctctttct
    31861 atttaaaggg aggaaaaaag aatgaacgtc tatttagccg aatttatcgg cacagcattg
    31921 ctcttactca tgggtggcgg tgttgttgca aacgtcgctt tgaaaaaaac aaatggtaac
    31981 ggtgcagatt ggattgtcat cactgttgga tgggggcttg gtgtaacttt aggcgtgtat
    32041 gctgttgggc aaatttctgg cgcgcactta aaccctgctg taacattagc gttagccatg
    32101 aacggtgact ttgcatgggc acaagtacca gggtatatca ttgcacaatt aatcgggggt
    32161 gtgttcgggg ggatgctcac ttggttaatg tacttaccac attggcgcgc aactgaagat
    32221 aaagcgacaa aattaggtgt tttcgctaca ggaccagctt taaaaaacta cactgcaaac
    32281 tttatttctg aaattatagg tacagcggta ttaacttctg gcttattata cattggtgcc
    32341 aataaattta ctgatggttt aaacccactt attgtaggtg cgttgattgt tgcgattggt
    32401 ctaagtttag gtggtacaac gggttatgcg attaaccctg cacgtgactt aggtcctcgt
    32461 attgcacatg ccatcttgcc aatcactggt aaaggcggta gcggttgggg ctatgcgatt
    32521 gtacctattc ttggaccaat ggtaggtggt atgttaggtg ctgttcttta tcgcctggca
    32581 tttaaaggta tttttgatgt atggacaatc gtaacattga ttgctttagt tctaacattg
    32641 ttattaggtg tcgctatgaa taaaaaagca cctaaagacg aaattgctaa aatttaacgc
    32701 aatgcaacat ttcaaaaaga tatagaaaga attggaatga cgaggtttct atcgcttttc
    32761 gcccattgat ggagacctgg tcattcttgt cgaattgaga accatacgtg tgccttatga
    32821 gatgttaaaa tgacgcatac gatgatgtga tcaattgaca cagagccgaa tgtttaaagt
    32881 agtactgata acggctaaat atataaagaa cttttactga agaacacatc atgaatgaca
    32941 tataacaagt taataatgac atagagatga agagttgaga ggagacaata ttatgggaaa
    33001 ttacatttta tctattgacc aaggtacaac aagctcaaga gcgattctat ttaatgagga
    33061 aggggaaatc gttggtgttg cgcaacgtga atttaaacaa catttcccaa aatcaggatg
    33121 ggtagaacat gatgcgaatg aaatttggtc atcagtttta tcagtcatgg cgtctgtatt
    33181 gactgaaaat aatgtatctg caaatgaagt taaaggaatc ggtattacga accaacgtga
    33241 aacaacagta gtttgggata aagaaacagg tcgtccgatt tataacgcaa tcgtatggca
    33301 atctcgtcag acccaaccga tttgtgacgc tttaaaagaa gaaggtcatg aacaaacatt
    33361 tagagataaa acaggtttat tactagatcc atacttttca ggtacaaaag ttaaatggat
    33421 tcttgacaaa gttgaaggtg ctcgtgaaaa agctgcaaaa ggtgatatct tattcggtac
    33481 aatcgatact tggcttgttt ggaagttatc aggtggtcgt gcgcatgtga cagactattc
    33541 taatgcgagc cgtacgttaa tgtataacat ccatgaattg aaatgggatg acgaattact
    33601 tgaattgtta gatgttccta aagcgatgtt acctgaagtg aaaccatcaa gtgaagttta
    33661 ttgtgaaacg attgattatc acttcttcgg tcaaaacgta ccgattgcag gtattgctgg
    33721 tgaccaacaa gccgcattat tcggccaagc atgttttgaa cgtggtgacg tgaaaaacac
    33781 ttatggtaca ggtggcttta tgttaatgaa cactggtgaa gaagcggtta aatctggtaa
    33841 cggtttatta acaacgattg cttacggtat cgatggtaaa gtgaactatg cgcttgaagg
    33901 ttcaattttc gtgtcaggtt ctgctattca atggttaaga gatggtctcc gtatgattaa
    33961 ctcagcacca caatctgaag actacgcaaa gcgtgttgat tcaacggaag gtgtgtatgt
    34021 cgtgccagca tttgttggtt taggtacacc atattgggat tctgacgcac gtggcgctat
    34081 tttcggttta acacgtggta ctgaaaaaga acactttatc cgtgcaacat tagaatcatt
    34141 atgttatcaa acacgtgacg tgatcgaagc gatggcacaa gactcaggca tcgaagtgaa
    34201 tagtttacgt gttgacggtg gcgcagtgaa aaacaatttc ttaatgcagt tccaatcaga
    34261 cttattaaac attgaagttg agcgtccaga aatcaatgaa acgacagcac ttggcgcagc
    34321 ttatttggca ggtattgcga caggcttctg gaaagataaa tccgaaattc aaagacgttg
    34381 gaaattagaa aaatcattcg aaccagaaat gaatcaaaaa gaaagcaacc gtctatacaa
    34441 aggttggaaa aaagcagtag aagcaacgca agtttttaaa ttagacgaag aataagtcgt
    34501 gtgatatact tgagttaagt taataacttc acgcgagata gtgagagact ttgttcgtac
    34561 aacttgatga aagtatgtag gcggagtctc tcttttttat gaaattagga ggcgaaagta
    34621 tatgagatta tcaactttga aaagagaagc ggttaaaaaa cgtatgcaaa atgaagcgta
    34681 tgacctgatc gttgtcgggg gcggcattac aggtgcaggt atcgctttag acgcatctgc
    34741 tagaggtatg aaagttgcat tagtggaaat gcaagacttt gcacaaggga caagttcccg
    34801 ttcaacaaaa ttagtacatg gtggacttcg ttatttaaaa caattgcaag tcggcgtagt
    34861 agctgaaaca ggtaaagaac gtgcgattgt atatgaaaat ggaccacacg taacgacacc
    34921 tgaatggatg ttattgccaa tgcataaagg cggtactttc ggtaagttct caacttctat
    34981 tggtttagca atgtatgacc gtttagcagg tgttaaaaaa tccgaacgca aaaaaatgtt
    35041 aagcaaaaaa gaaacttctg ctaaagaacc gcttgtaaaa caagacggct taaaaggtgg
    35101 cggttactat gtggaatacc gtactgacga tgcacgttta acaatcgaag taatgaaaaa
    35161 agcggcagaa caaggcgctg acattatgaa ctacgcgaaa gtgacaaact tcttatatga
    35221 caataaagaa aaagtaaatg gtgttgctgt cgtggatcgc cttggtaacg aaacattcga
    35281 aattaaaggt aaaaaagtcg ttaacgcaac aggtccttgg gtagacgaag tgcgcagtgc
    35341 agactactct aaaaacaaca aacaattacg tttaactaaa ggggtccatg ttgttatcga
    35401 ccaatctaaa ttcccattac gtcaagccgt gtactttgat acagaaaaag acggtcgtat
    35461 gatttttgcg attccacgtg aaggcaaagc atatgtcgga acaactgaca cattctacaa
    35521 caatgacaaa tcaaaaccac ttgttaacca agaagaccgt gattatttag tggatgcgat
    35581 taactacatg ttcccaacag tgcatattac agatgcagat atcgaatcaa catgggctgg
    35641 tgtacgacca ctcatttttg aagaaggtaa agatccttca gaaatttcac gtaaagacga
    35701 aatctgggaa ggtaaatcag gcttacttac aattgcaggt ggtaagttaa caggttaccg
    35761 tcacatggcg cttgaaattg tagatttagt tgaaaaacgt cttaaacaag aatataaatt
    35821 aaaatttaaa gaagttgaca caaaacatat cccaatttct ggtggtgatg taggtggtag
    35881 cgcaaacttc gaacaattta ttgaagataa agtggcagta gcaaaagcga tgaacttaga
    35941 tacagattta gcacgtcgtc ttgctacgaa atatggttca aacgtagatg acttattcgc
    36001 aattgcacaa gcagcacaac atcaaaacac aggtttacca ttagaacttt atgttgaact
    36061 agtctatggt gtgcaaaacg aattagttgt taaaccaact gactttttag tacgtcgtat
    36121 cggcgcatta tacttcgata tcgatacagt acttcgccat aaagacactg ttgttgatgt
    36181 attggctgac ttacttggtt acgatgccaa cgttaaagct gtgtacaaac aagaattaga
    36241 agaagcaatt caagaagcaa gacacggtca acatcaacca gctgaaaaat aattgaagat
    36301 caaataaaaa agcgtctgag gtgggatgat catctcaggc gctttttctg taaaaacaaa
    36361 agaaaacggt cgatatgaca aacatcaacc gttgttctat aatgaatact cttaagatag
    36421 taatgacttc cctatacgag tgaagaaatg aatgaaaagt tgaagtggaa cagacttgta
    36481 catctcttcc taatttgtgc ttgatgcatc aaaacgatgt aaaatgatgc cctcacatca
    36541 attacacatc gtaagtcttg cctgctccac ttcaattaac atgttttagt tagtaccttc
    36601 taaaaatgta ctaatcgcat gtttgtaaat taaatgatga cgcccctgag agagtatatc
    36661 aattacatat tggtcaaaat caacaattgt accgcgtaat tggaaaccat tcgttaaaaa
    36721 taccgtcagt tctttaccct cacttttaaa tttttctagg tactcatctt gaatgttacg
    36781 tttctcaatc atgttcattt ctccttttat ttattagggg tttaagctca gataacattg
    36841 aagtaagtga catcttctct ctatctaacc aatgaacatt aagtttattt gtaaaccaag
    36901 tcatttgtct ttttgcgtaa ttacgagaat gctgtttcaa taacgtgatt gcttcatcta
    36961 atggcatttc atttttaatc accggtatta tttctttata accgatcgct tgcatacttt
    37021 gacacgattc ataacctaat tcaataagtt cttgcacttc atccaataaa ccatgagaca
    37081 acatcatgtc tacgcgacta tttattctag aatataaggt gtcacgcgac atttttatcc
    37141 ctactaataa tgtatcataa ttttcagtca attgggtact tttcttgcga ttacttaaaa
    37201 ctttttttgt acttaagtaa tatgaaatgg cacgttccac tcttttacga ttattcggat
    37261 ggatttcttg atgtgaaatt ggatcaaaag tgcctagata gtcatgtatg gcttcattcg
    37321 tgtatgattt caattttgcc atttgttcag caacacgctg ttcagtttca ggagagatcg
    37381 tttcatcatc aaactgataa tcgtaaatca cggactgaat atacaaccct gtaccaccta
    37441 caatgattgg tactttacca cgcgttgtaa tgtccgtgat taactgttgt gcttgttgtt
    37501 gaaaatcata tgctgaatac gtttcatctg gttttaaaat atcaatgaga tggtggggga
    37561 taccgtccat ttcatcagga gttactttgg ccgttccgat atccatgcct tgataaactt
    37621 gcattgagtc cccgctaatc acttcaccat cgatagcttt agcgagtgcg acaccgagtt
    37681 ccgttttgcc actggcggtt gggcctacaa tggcaacgat aaagggttta ttttgtgaca
    37741 ccccgttcac ctactttttg ctttttaata atttgtcgac tcatccagtc taacatatgt
    37801 cgccatacgg tttctttatc tttttcaaat aaaacttcat gtcttttatt tttgtaaagt
    37861 tgtaccgtaa tatgatggat accgcccctt tttaaaattt tgccgaaacg acgaatgcct
    37921 ttcccatttg cgccaaacgg atcatctttg ccagaaatga gtaaaattgg taattcgaga
    37981 ttcatatccg cgatattttt cacacgtgac gttcgcatca tcgtttggag tacactaaaa
    38041 ataagttgat tggaaacaag aaaaccagtg tgtggatctt gaatgaaatg atcgacttct
    38101 gacttatcag aactgagcca atcacttgtc gtacgtgtcg gtttgaaatt tttattaaag
    38161 cgtccagtcg tcatctgatt gagccagttc attcgacgct tcttaccaca gacgagcgta
    38221 atgattttca gtaaaggtaa gttggcgata taataccacg ttggaaaata gcctgtacca
    38281 cttaaaataa ggccttgtac ggcttgcgga tatgtttgta caaattgtcg tgcaatgata
    38341 gagcccatcg aatgcccaat taaaattaga ggtaaatggg gattgaattg agctttcaac
    38401 gtactttgaa tttcaaaagc atcttgaacg acttgtgtca ttgaatcaaa atgaccgcga
    38461 ataccatcca catcacagcc atgccctcga tgattgtgac gaataacatg gtagccttgt
    38521 tgatttaact tattaactaa tgtcacgtag cgatccatat gttcagccat accatgaaaa
    38581 atatgtacga taccaactgc ttcaaaatca gtccgatcca ctttcgcttc aatcatcgtc
    38641 ccatcagtca ctgcaatttt catagcttct gattttacca ttttttcacc tctcaagttg
    38701 aaatcactta cttcaacttt accacatcta ttagtttgaa acacattaaa acacacttgc
    38761 tctatatatt acttcatgaa cgaaatgata atatacaata taatgaaagt atcataagaa
    38821 atggagaggt tcagtagcca atatcatgca gttgtaaatg ggtacaaatt tttatattaa
    38881 ccattgacaa taagagagta gggcgccaat cataaaaact aaaggggcaa tggtgaggca
    38941 aacaatagca cgacatattt tacatagagc gagtgtcatt gaatgtccag gtaccaacat
    39001 tcatctcaaa aggggttata ttttacgaca ggattcacat tgcaacatga tcgaaaactt
    39061 gctagagatt gattcaaaca aaatgaaatg caagcgtggc tgtatagtcc tattgcgcaa
    39121 aatgtttatg cacaatagga agcatatcgc aaaagaatga ttacagacga aggagaacta
    39181 agtgaagtat tgaaagctga ccgcatcaat aggataatcg atgttttaat tcaagtggat
    39241 tcatttaaat ttgtgaaaat cagtcaacaa catccctttc agcaacaaca tgaaagcgat
    39301 ataagaatca ataatcaacg tccggtatat caattttccg atattgagaa agtttttagt
    39361 acagatacat gtatcaaaca taaaaaacat cactgctttc aacgtacata acatgaaagt
    39421 gtgatgtttt cttctgtcta taataaatgc tcgatatctt gctttaaatg ttctggtgtt
    39481 ttttgtggtg aaaagcgttt aacgacttga ccgtcacgat cgactaaaaa cttagtaaaa
    39541 ttccatttaa ttttgtcgcc gaagatgcca gacttttgcg atttaagata gttataaagt
    39601 ggatgggcat tgtctccgtt cacttcgatt ttttcatgca tcggaaatgt cacgccatag
    39661 ttcaattggc aattcgtcgc tgcttcttta ccactaccag gttcttgctt gccgaactga
    39721 ttacttggaa aacctaaaat tgtaaatcct ttgtcacgat aagtatcata aagtttttgt
    39781 aatccttcaa attgtggtgt caatccacat tcgcttgctg tattcacaat gagtaagaca
    39841 tcacctttat attgtgagag tgggtatgta gaaccatcaa tttttgggac ttctatatca
    39901 tataaatgca tcgtcttcac ctctaaatct aatatagcac aatcagcacg tatagtctta
    39961 attcacacac tatgatagaa tacgtgaaga tatgtcaaat agaaaacggt gataatatgc
    40021 ggaaaacgga acttcactct actgaaaaaa taaaagaaac ggcggtactg gtcggtgttg
    40081 atttgtatca gtcgcattat gattttgaaa gtacgatgaa tgaattgaat gcgttagctt
    40141 ttacgtgtga tttagatgtt caagggcaat ggacacagca gaaaaatcaa gtggaccata
    40201 aatattatgt cggccgtggt aagttaacag agattcagga tttcattgaa tttcatgata
    40261 tagatgtggt cgtagcaaat gatgagttga caacagcaca gtcaaaaaat ttaaatgcaa
    40321 gacttggtgt aaaagtcatt gatcgaacgc aactcattct tgaaattttt gcgttaagag
    40381 cgaaaagtaa agaagggaag ctccaagtcg aatatgccca actagactat ttgttaccac
    40441 gcttaacagg gcatggtaaa agcttatccc gtctcggtgg gggcatcggg acgcgtggtc
    40501 caggtgaaac gaaactcgaa acagatcgtc gtcatattcg aacacggatg aatgaaatta
    40561 agcgtaaatt agcagaagtg gaagcccatc gagagcgtta tcgtaaccag cgcgaacaaa
    40621 atcgagtgtt tcaagtcgcg ctcatcggct acacaaacgc aggaaaatca tcatggttta
    40681 atacgttaac agcagctgac acgtacgaac aagatttact ctttgcgaca ctcgacccca
    40741 aatcacgtca acttaaaatt aatgatggat ttgagatggt catttcagat acagtcggtt
    40801 ttattcaaaa gctaccgacg acgttgattg aagcatttaa gtcgacatta gaagaagcgc
    40861 gacaagcaga tttgctcatt catgtcgttg atgcgagtca tgcagaatat aaaattcaat
    40921 acgatacagt gaatgaaatc gtacaagagc ttgatatgca agatatccct caagtcgtca
    40981 tctttaataa aaaagactta tttacaggta caaccacgcc tgtcacacag tatccatctg
    41041 tatttgtctc atcaaaaaat gaagcagata ttgaaaaagt gaaaaactta ctctttcaag
    41101 cgattcaaaa acaatttgac ttttatacag cacaattgcc aagctcagca gcggaccaat
    41161 tgtatcatct taaacaacat acgttagtca caaaattaga ttacgatgaa gcaacagatc
    41221 aatatcacat tgaaggttat caaaaataat agaaagaagc ggaatcatga cacaattaac
    41281 caaacttatt gaagaagtcg aaacaacttt agccccttat tttaaagata tcgaaacacg
    41341 tgcatttgaa aatcaagcgc gtgtcttaga tgcttttcat aaagtcaaaa taacggaagc
    41401 cgatcttgtt gggtctacag gatatggcta tgacgattat ggacgtgacc atttagaagc
    41461 ggtgtatgct gagacgttta aagctgaaga tgccctcgta cgtccacagc tcatttcagg
    41521 gacacatgcg attactgtgg ctttacaaag tacgcttaaa ccaggtgaca gtttgatgta
    41581 cattacagga agtccttacg atacgttatt agaagtgatt ggtatcaatg gtaacggtgt
    41641 tgaaagctta aaagaatatg gcattcacta tcaggaggtc tcattaaaag caggtcatat
    41701 tgatgtggaa cgggttttag agactattga tgacactacg aaagtgatcg cgattcaacg
    41761 ttcaaaaggg tacgatcagc gtccgtcgat taatgttgat gaaatcggtg atgccattcg
    41821 acagatcaaa gcgcaatatc ctgaaatgat tgtatttgta gataactgtt acggtgaatt
    41881 tgtcgagacg aaagaaccga ttgaagtcgg cgcagattta atggctgggt cactcattaa
    41941 aaatcctggc ggcggtctag caaaaatagg gggttatatc gtcgggcgtc gcgatctagt
    42001 cgaacgttgt ggttatcgtt taactgctcc gggtatcggt aaagaagcag gtgcctcact
    42061 gtatgcattg caagagatgt accaaggctt tttcttaagt ccgcatgtcg tgagtcaaag
    42121 tttaaaaggg gcattattta caagtttatt gttggaacga ttgaatatgc gtacatcccc
    42181 acgctatgat gtgaagcgaa cagatttaat tcaaaccgtt tcatttgata caaaagaaca
    42241 aatgattcaa ttttgccaaa gcattcaaca cgcatcacct attaatgccc actttagtcc
    42301 agaaccaagc tatatgccgg gttacgaaga tgatgtcatt atggcagcgg ggactttcat
    42361 acaaggttct tcaattgaat tatctgctga tggaccgatt cgcccgccat atgaagcata
    42421 cgtacaaggt ggcttaacat acgaacatgt aaaaattgcc gttacgcgtg ccgttgaaaa
    42481 attaattaaa gtcggtctca tcaaattaaa ataggtatat tttacacttt tgctagaatt
    42541 gacacatcaa aatcgaggtc tgaattgtca gaaatgttgt gatttcgggc tttgaaacac
    42601 tcatgtcagg ttttctgaca catttttgaa atgtccattc gggtatgcta tggttatatc
    42661 aagttcaaaa agtcaaggag atgtaggaga tggataacga tacaattcgc cgcaacatgc
    42721 ctgtatttcc gatgagtgtt gtcagtcgtt taacggaact gtccgcgcga caaattcgtt
    42781 attatgaaac acatgaactt gtaatacctt cgcgcacaga ggggaacaaa cggctttttt
    42841 ctttgaatga tttagaaacg ttactttcaa tcaagcattt attagaaaaa gggtttaata
    42901 tgaaagccat caaagaaatc atgttagagg atagccaaaa aacgcttaat gatgaagaag
    42961 agcggttaag aaagcaaata ctcgtagata cgacgcaaaa accgcaacgt gattcgatac
    43021 cattgaatcg tggagattta tcgcgctttt ttaaataact gatactggag gacatttttc
    43081 aatgccaaaa caacacttta ctaaagatga tattagacgc tttgccaaag aagaaaatgt
    43141 acgctattta cgtttacaat tcactgatat tttaggaaca attaaaaacg tggaagtacc
    43201 agtaagccaa ttagaaaaag ttttagacaa tgaaatgatg tttgacggtt cttcaattga
    43261 aggtttcgta cgtattgaag aatcagacat gtacttatat ccagaccttg acacttgggt
    43321 gattttccca tggacagctg gacaagggaa agtcgcacgc ttaatttgtg acgtttatac
    43381 aacagatcat caaccatttt caggtgaccc tcgtagtaac ttgaagcgtg tattaaaaga
    43441 aatggaatca ttaggttata cagatttcaa cttaggacct gaaccagaat ttttcttatt
    43501 taagttagat gaaaaaggcg aaccaacaat ggaattaaac gatcacggtg gttatttcga
    43561 cttagcccca acagatttag gtgaaaactg tcgtcgtgac atcgtgttag aattagaaga
    43621 tatgggcttt gacatcgaag cttctcacca cgaagtagca ccaggtcaac acgagattga
    43681 ctttaaatat gcagacgcga ttacagcatg tgacaacatt cagactttca aattagtcgt
    43741 aaaaacaatt gcgcgtaaac ataacttaca cgcaacattt atgccaaaac cattattcgg
    43801 tgtgaacgga agcgggatgc atttcaacgt ttcattattc aaagggaaag aaaatgcctt
    43861 ctatgatgaa aaaggcgaaa tgcaattaac agaagatgca tgccacttca tcgcaggcat
    43921 tatgaaacat gcgcgtggtt acacagcagt atgtaaccca cttgttaact catacaaacg
    43981 tttagtacca ggttatgaag caccaagtta tatcgcttgg agtggtaaaa accgttcacc
    44041 attagtacgt gtaccaagct ctcgtggctt atctacgcgt gtagaaatcc gttcagtaga
    44101 cccagcagca aacccataca tggcattagc aacaatctta caagcaggtc ttgacggtat
    44161 taaaaacaaa ttagaagtac cagaaccagt taaccaaaac atctatgaaa tgaatcgtga
    44221 agaacgtgaa gcagtaggta ttgaagactt accatcaaca ctttacacag cattaaaagc
    44281 aatgcgtgaa aacccaatcg taaaagacgc actaggtgaa cacatctata accagttcat
    44341 caactcaaaa tctattgaat gggactacta tagaacgcaa gtaagtgaat gggaagtaga
    44401 gcagtatatg aagcagtatt aatacgtaga accctcgagg ctattggctt tgagg
//
LOCUS       DANHPA010000007        39863 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.007, whole genome shotgun sequence.
ACCESSION   DANHPA010000007 DANHPA010000000
VERSION     DANHPA010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 39863)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39863)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39863
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.007"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            32..544
                     /locus_tag="PTC28_000326"
     CDS             32..544
                     /locus_tag="PTC28_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4242 domain-containing protein"
                     /protein_id="HDK5715647.1"
                     /translation="MSLFLLETQDLSFAKTPAELEEKVQSLSEQAGPELIEVQVTEDL
                     SHGYFIVEGHSEEEAKQFLEDGSIQVSLVKEVRLVGKDLDEVKQGDVSIDYLVTWNIP
                     EGITMDQYLERKKKNSVHYEEVPEVQFQRTYVCEDMTKCVCLYNAPDEDSVRRAREAV
                     NTPIDGIEKI"
     gene            715..1455
                     /locus_tag="PTC28_000327"
     CDS             715..1455
                     /locus_tag="PTC28_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5715648.1"
                     /translation="MIEIKTLHHYFGEHHVIQDFNLTIPKGKIVSFIGKSGCGKSTLL
                     NIIGGFLTPTSGDVVIDQTRKTAPSSDCLMLFQHHNLLPWKTINDNIKLGLTKDVSNA
                     EINTYLSTVGLAHQGTQFPAALSGGMQQRVSICRALIHQPRVVLLDEPLGALDAFTRY
                     KLQDELIKLRTHTNATLILVTHDIDEALYLSDEIVLLGDGAQILNQYTIQQSHPRNRS
                     DEALLSIRRQIMEDFALNHHMAEPEYYL"
     gene            1469..2416
                     /locus_tag="PTC28_000328"
     CDS             1469..2416
                     /locus_tag="PTC28_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDK5715649.1"
                     /translation="MQKRALILFIIALFIVTGCTPNSQNHVNQDKKVLKIGYLPITHA
                     ANLMMTKEIKQNNPNYDIELVRFNNWPDLMDALNSGRIDGASTLIELAMKAKSKGSPI
                     KAVALGHHEGNVVLGQNGHDLHDFNNDNNYMFAIPHRYSTHYLLLEEMRKQLHIGHDH
                     FHYHEMAPAEMPAALSEQRIDGYSVAEPFGALGEQLGKGHLLQHGSDIMPDAYCCVLV
                     LQEDVIQHHHQAAQQFVSDYKKAGYQLDDKAKSVDVMSKYYKQDRKILEQSAKWTSYG
                     DLTIQQEGYDNIAQLVKAHHLFDAPSYDQFVDNSLYKEG"
     gene            2422..3186
                     /locus_tag="PTC28_000329"
     CDS             2422..3186
                     /locus_tag="PTC28_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5715650.1"
                     /translation="MTAKRFKKYLRPFYTFALFLLLWQCVIWIGHYQPVLLPGPVHVA
                     QSIGNFIITGEIFLHLGISLYRFIVGFLIAVMLAIPLGILLGRNRILYQAIEPLLQTI
                     RPISPIAWSPFIVLWFGIGSLPAIFIIFIAAFFPIIFNTIKGVRTIDNHYLKIADNLN
                     LHGWSLYRDIIFPGAFKHIMSGIHVAVGTSWIFLVSGEMIGAQSGLGFLIVDSRNMLN
                     LEDVLSAIFFIGIFGFLIDRIISYLESLILKRFGES"
     gene            3206..4249
                     /locus_tag="PTC28_000330"
     CDS             3206..4249
                     /locus_tag="PTC28_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HDK5715651.1"
                     /translation="MTTIETLIEQELNPYLVEIDNGQYYAQPFIQHLFENGHFSKDNL
                     KQNAQVVEKVAYSCLTTAFCLWCQLAFSTYLKQAQQAALHEDLQQQILSGQALGATGL
                     SNPMKSFNALETFNLTHYYEGDQLIVNGKLPAVSNIGYDHYFGAISQNTKTNELVMFI
                     LQANTDGLTLEEKTNFFGVNGSATYSIIFDNVAVPKSQIITKDAEKFAATIRPQFVAL
                     QIPIALGSIQSSLDLIDQFSNAQNGINAYLEYDVKNYKKQFETLREQYYALLDKAQGD
                     LNDHLLEVIQLKKALGYLLLEVNQASMVNGGSRAYSPKAPQARKLKEGFFFAALTPTL
                     RHLGKLEETLQMT"
     gene            4594..5766
                     /locus_tag="PTC28_000331"
     CDS             4594..5766
                     /locus_tag="PTC28_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5715652.1"
                     /translation="MQEKLWSKDFIFITLINFLMYMIHYMLMVTVTVFTIHEFHASES
                     IGGLASGIFIIGMLLGRLASGRIVDSLQPQKVLVYGVIFSIITVALYFVIQTLSLLLI
                     VRFIHGIAFGFSSTATGTISSRIVPEARKGEGIGYYALSVTTASAVGPFFGILFNQSF
                     GFRSIFTLSLGVIIVAFVLALALKPLPKVEISTESEPLKGIRAFIQKDAIPVSFVLAV
                     IGVAYSSVLSFLSVYTESINLPTVASYFFIVYAITSFITRPFTGKIFDQRGHNAIMYP
                     VIAIFAIGLFILSSAQSTWLITLSAIFIGMGYGTIVPSGQAIVVQQAPRQNVGLATST
                     FYIFLDFGAGFGPFLLGYLISSWGFRALYIAMAVLALVALVIYYFVHGRHVAQHSK"
     gene            6054..7625
                     /locus_tag="PTC28_000332"
     CDS             6054..7625
                     /locus_tag="PTC28_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl CoA:acetate/3-ketoacid CoA transferase"
                     /protein_id="HDK5715653.1"
                     /translation="MKMCTWAAIPSLVKTGDVIGLAALTVSNLPAALLSSLIEHYNQH
                     HEPTQLTMMMANDISSRGLATELDDFVERHMVDRVIMSIMTASPRTAQAIKHNELEAY
                     FLPQGVIATHYRQTNAITPGVITKIGLNTHIDPRYQGGRVNDKTTASLVSFLNIDGED
                     FLHYQLPPLDVALLRGTYADEQGNIYMDEEAHLGESYSLALNAKSNGGTVIVQVKAIV
                     DKGQQNPNHVYIPGSLVDYVYVVEDTSQHRQVVQTMYQPTLSGQARIDIIPEPPLPFN
                     VRKLMLRRAAQFLSVGDTMSIGYGINNELTNLLHEEHVNDLVQPIMDIGIFGGFIGSR
                     EHFGMNYNSDVRMRHELTWDYIYNGGVSIALMSFAEVDQHGNVNVSYFGNRMNGCGGF
                     IDISQSVQKLILTGTLIAGAKLSIENQQLSVVEEGHTQKFVETVSNIDFNASYAKSLH
                     QEVFFVTDRAVFELQEDGLTLIEVAPGLDIEQDIIAQMGFTPKISPQLKEVDPTMYQA
                     KWGQLRQMIQSNRIV"
     gene            7644..9158
                     /locus_tag="PTC28_000333"
     CDS             7644..9158
                     /locus_tag="PTC28_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl--CoA ligase"
                     /protein_id="HDK5715654.1"
                     /translation="MNFDWIKTRADFDVEKPAVIDHLKGTQWSYQQLNIRADHMAHYL
                     TKQGIQKGDVVGVLAPNDVALLDLLFACFKTGAVFLPINWRLNPKEIAAIVEDSTLKL
                     LFYAEKHLSSLNEVNPKYLHMDIDSDAYNQIVDPSQHSVFKAINVESTDLAALIYTSG
                     TTGVPKGVMFSYESFVHNGANIELTYKFNSDYLTIISTPMFHVLGFNDTVLPTLMAGG
                     TLVLQRYFNGEELNNMIAQYHPDFLIMIPTMYYSTLTQDNFNPEHFRAMKYVIQGGSQ
                     PLPSIQQAFKKHGINIINGYGLTEAPLVLVNTPENARQKPMSIGKAVMFVDAKVLDDN
                     KNEVGLNEIGELAIRAKNVTPGYWNKPEETAKIFHNQYLLTGDLAKKDVDGDIFIIDR
                     KKELIITGGENVLPSEVENALAEHPLIDRCVVVGYEHPKYGESIAAAIILREQPEDYV
                     DQLDQHMRERLAGYKVPRMYLPVTHMPLNSTQKPDKLAITKIMNDKAQQQTSEQ"
     gene            9195..10406
                     /locus_tag="PTC28_000334"
     CDS             9195..10406
                     /locus_tag="PTC28_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HDK5715655.1"
                     /translation="MTTDKKNTLKQLYPEDILSIAKGLTDGEVALLQQLNDLLESKYR
                     QDINQHWVDATVPEDYFQDIGNLNYFTNPLLYQGREEAKTPSQLFQFFMSYTIARFDV
                     SLATLLGVHQGLGHNTFLFGGSSEQVAKYVPKLQSHELRTCFALTEPNHGSDVAGGLE
                     TVAERHGDEWVINGAKKWIGGAHVSDVIPVFAVNKDTGKPHCFVVKPEQEGVEIEVLQ
                     HKIALRIVPNAEIRLNHVKVKEADRLQNITSFKDIAKILYSTRAGVAYMATGALAGTL
                     RATLSYVKERQQFGKSISQYQLIQEKLAMIQGNLTHAMAMSAQLARMQENGEYDEVAT
                     STAKMMNALRLRESVAMGRGITGGNGILAGEHDIARFFSDAEAIYTYEGTHEMNALVI
                     GRALTGVSAFV"
     gene            10451..12712
                     /locus_tag="PTC28_000335"
     CDS             10451..12712
                     /locus_tag="PTC28_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HDK5715656.1"
                     /translation="MTIRKVTVLGAGTMGAQLAALLVNAGLKVKLLDIVIDHNDPNKI
                     SKAAYDKITHPKKPLLFDLALAPHLTYGNFEADLANDDADLYLEAVKEDLEVKHQLWQ
                     QVAQTAKPEALFATNTSGIPIEAIAKAFGPEDKKRFFGLHFFNPPRIMKLVELIPNAE
                     TDPTLIDNVQTFTQEVLGKGVIVVNDVPGFVANRIGTQTMNDIMYRAEQQGFSITEID
                     ALTGKIIGRPKTGTYALSDLVGLDIAVSVIRGLQQVPEEQPYFQDVKLVDTLYEAGAL
                     GRKTKQGFYKKARKQKQRLVYDVDEQDYVPLTQPELPILTTFTKDLAHNLDVIFNATD
                     RAGQFLWETLRNNFYYAARNVPKATDDFQDIDRALVWGFNWKLGPFQLWDLMGFDRVK
                     TRIEAELGTLPEWIQQIEDGFYGECETIDVVTPIEHQLDKILWQRKDSQLAIVNAHQL
                     LLKLRSYNNVITDAFNDDLVEAIDMLENEPYSSMVIYADGPHFSVGANLYEMKKAYET
                     NQIDKRIAPSIDRLHASFNRLKYSEKPIVTAIHGRVLGGGCELALHSPFIVASSETYM
                     GLVEAGVGLLPSGGGLAEMSDRILKTTHMMNDKQASMTQLLMTVGLAKVSTNAFEAQR
                     YGFLRPTDTIIFNQERRVQIALQRAQYEADAHYMPAAERQYLALGKDFLSLAQGQLDA
                     QRLGHYISKHDYDIALRIATVLSGGDLPRNTYIQQRYIQQLEKVHFLELIKTEKTYDR
                     ITYMLENGKPLRN"
     gene            12736..13917
                     /locus_tag="PTC28_000336"
     CDS             12736..13917
                     /locus_tag="PTC28_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HDK5715657.1"
                     /translation="MREAYIVAYGRSAVAKAKKGALFHERPDDVAAEVLKGVLNRIDG
                     AFHPDMVEDVIVGNAFPEGLQGQNIARTIALRAGLPNSVPGQTVNRYCSSGLQTIALA
                     ANQIMAGQGDILVAGGIEFMSAVPMGGNEPTNNPTLQQQDVGASYPMGLTAENVAETY
                     QVEREDQDAYAVQSHQRATEAQQKGKFTDEIIPIRVNKVSYDENGPRVDTEIFDTDEL
                     VRPDTHVEALSQLPTVFKADGTVTAGTSAPLSDGVGFVVLMSKEKVTALGVTPIARFV
                     GYKAVGVDPKLMGIGPAFAIPEVLDLTHLTIDDIDLIELNEAFASQTIASMREVGLSE
                     EKTNVNGGAIALGHPLGATGAILTARLLAEMKKRSNVRYGMVTMCIGVGMGAAGVFEL
                     V"
     gene            complement(13979..15310)
                     /gene="gtfB"
                     /locus_tag="PTC28_000337"
     CDS             complement(13979..15310)
                     /gene="gtfB"
                     /locus_tag="PTC28_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system glycosylation chaperone
                     GtfB"
                     /protein_id="HDK5715658.1"
                     /translation="MVNLFEYFNSDTRELYETLRISGHHDETIVLVDDGFLPEGIRSP
                     YQFFANYQVPDKQRARYFNEVPVPRFWEIEGNNDEAWVKDMSDRRAMIYFHPSEKRRL
                     VSHVEWLNRKGQLQYVDHYNQHGFRYAQTVYDLTGNMIFRRYLDQQGNEVIYENFVAS
                     SVILTWKGEQYHFSDSIDFYTFFLKAIDVNLENIVINSLSTPFLILYQLDIPGNDILF
                     WQETSYGEIPGNMRVILERDTPRHCRILIPEREEYENIYAQLTDEERQFIAHSGYLYN
                     YQSENNYTMNILTMTNSDQIENLEAIVQSCPFAHFHIGAVTEMSSKLTAFERYANVHL
                     YQAIELDTVETVYRKCDVYLDINNGGEIINAVKKAFDFNMLILGYSDIAHNRRFTAPE
                     NLFEKEKDASALIEALKDINLKKRYFKLRLQYQQDHANETTIEAFNQIFKA"
     gene            complement(15303..16811)
                     /gene="gtfA"
                     /locus_tag="PTC28_000338"
     CDS             complement(15303..16811)
                     /gene="gtfA"
                     /locus_tag="PTC28_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system glycosyltransferase GtfA"
                     /protein_id="HDK5715659.1"
                     /translation="MTIYNINFGIGWASSGVEYAQKYRAEALRGLDVPLKFVFLDFMS
                     SENIQTLTSNLGFQDDEVIWLYQYFTDIKIAPTTYTIDDIKSSIHEEVVREEVDGSVR
                     WLYLEQPGSFITCYLKNEDEPYVDCAEFVINNKLVRKDYYSYTRTFSEYYAPADQKAK
                     LYMRHYYNEDGSVVYTEYIDEGTHVYAFKDQLFYTKEEFVAYFIQNLKLTSEDIVIYD
                     RATKVGQAMLQNKGDSKVGVVVHAEHFSENATDEDHILWNNYYEYQFTNVKEIDFYIT
                     ATERQNEILSQQFKQYLNAEPPIYTVPVGSLNQLNKPASPRHAYRMVTASRLASEKHI
                     DWLVRAASIAKKEVPELTFDIYGEGGERESIENWIEKLGAHDYIRLLGHQKLDDIYKN
                     YPLFVAASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIRDGKNGYLVPIEVKEDSN
                     EKIIDSLAQAIIRFFNDGPVDPHETSYAIATPYLIENTRQKWKELIEEVLHG"
     gene            complement(16827..19214)
                     /gene="secA2"
                     /locus_tag="PTC28_000339"
     CDS             complement(16827..19214)
                     /gene="secA2"
                     /locus_tag="PTC28_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system translocase SecA2"
                     /protein_id="HDK5715660.1"
                     /translation="MSQSLHKTINKMRLRRLKRILKRIQQYEKPFQMLPDDVLQQKTV
                     TFKRQLLQKETTLEAILPEAYALVREASRRVLGMFPKDVQVLGAIVLHEGNIAEMQTG
                     EGKTLTATMPLYLNALTGKGAYLITTNDYLAKRDYMEMKPLFEWLGLSIALGFVDIPD
                     YEYEKGEKQAIYQHDIIYTTGGRLGFDYLIDNLAESREGKFLPTLNYGIIDEVDSIIL
                     DSAQTPLVISGAPRVQSNLFQVVNTFVQTLENKRHFKMKKTKKEIWLTADGIEAANAY
                     FGVDNIYDAPYFDLVRNINLCLRAQFLFENNMDYFVYQGEVVLIDRINGRMMHGTKLQ
                     SGLHQAIEAKENVEMSMDMSVMATITFQNLFKQFNVFAGMSATSHLGEKEFLDLYSKV
                     VIQIPTHRPIQRIDYPDRVFKNIEDKHQAIIERVKTLYTEQRPVLLITRTAESAEYFS
                     AALFALDIPNNLLIAQNVAKEAQMIAEAGQLRAVTVATSMAGRGTDIKLAEGVPELGG
                     LAVIISEHMENSRIDRQLRGRSGRQGDPGTTQIYISLEDYLVKRWSDHQISRIKRLEK
                     FDTHTLQNSRLFQKHVRKIVKRAQRLSEEQGIKVRETSNEHEKSISVQRELVYKERNR
                     VLQFKGLEEIQLEQLALEVFEEAFEHTHFTVSEWVDYIYKNLSFQYKGQLEGVDLRDI
                     NAVTQYLLKLFKQQLAYQRQHLDDYFYTYFVQKAILKAIDSNWIKQVDHLQRLKNSVN
                     TRQNGKRNPIFEYHKVALESFELMTDAIKKDIVKYLCQSITEKEDDRHLIVHFPN"
     gene            complement(19211..20137)
                     /gene="asp3"
                     /locus_tag="PTC28_000340"
     CDS             complement(19211..20137)
                     /gene="asp3"
                     /locus_tag="PTC28_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein Asp3"
                     /protein_id="HDK5715661.1"
                     /translation="MSDKHPFNIRWTHVTKDTFMYGTKLKWSSTGALFENALMPSGIV
                     IHEWKMMTDFQTDVNVPDLPILKKNCTYHFYFDYDVQPENSIYFKVIFKRRNGTTCGF
                     QIIKTHEADVTVPEDTFSYVIQMINAASTQLMFRQITIKEARLEIHRKDGVRISSMQN
                     PNANVARTTLIFAPKEGLDSELIKGIQNCMLVTGWDVKASTYEITHLVEMIKEKTKGY
                     RCQLVGYDKRSNKMAKLIGSHLKATIFVTSDTDNAQENAPNIHDAQNSTIVIYQGNET
                     VTQSCQWLDAVLNKSHQLRGLNVQRLNGGQIE"
     gene            complement(20127..21671)
                     /gene="asp2"
                     /locus_tag="PTC28_000341"
     CDS             complement(20127..21671)
                     /gene="asp2"
                     /locus_tag="PTC28_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein Asp2"
                     /protein_id="HDK5715662.1"
                     /translation="MKQRYKMLQIGGDNYASHFKDRDEVSWTSMPLDSLSDLEELKKL
                     VEEEKQFDFVFVQVPYSEMLMQAFRLVSQPYNTYVDQRFWNSFFEAEEVVRTRFIRCF
                     SYDSEEDCIKRLMALAFSKQYGDRIHPIHCKVNPLFKGETYYEGRHQLVLKGNFGETY
                     TPILSWNMYLYYDRYKVNEIWLEYTSSPHVEVSYTLRLYENLNMDNLIREFVLEGERL
                     IEPFAIPSMDKDAYIFVTAKAKGEGTLKVGNIHKRWSRMEHGQFILGGQRWSGEDRGE
                     FIHFFHPGDLKPPLNVYFSGYRTAEGFEGYYMMEKFKAPFLLISDLRLEGGGFYLGND
                     AFENQIKKVIQDTLEWLGFKEDEMIMSGLSMGSFGALYYGAQLNPAAIVVGKPLVNIG
                     GIAENMRLMRPEDFGTALDILLTNERGLDDEAIERLNQKFWTTLNQNQIDQTLFAISY
                     MEHDDYDLYAFQNLLSVLSRQGARVMSRSAPGRHNDDTPTITSWFSHFYFMIMESQFG
                     RVRDER"
     gene            complement(21655..23220)
                     /gene="asp1"
                     /locus_tag="PTC28_000342"
     CDS             complement(21655..23220)
                     /gene="asp1"
                     /locus_tag="PTC28_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein Asp1"
                     /protein_id="HDK5715663.1"
                     /translation="MKHFIPAWYTTDDWWRSQALPFHRTLKVNEFDELISLMNIHLKN
                     KAPFEMMVLNYSPNLRLFLHRQELFEATYWSLFDEIQGFTHQTPRPIDYRQFNWPNGT
                     EFVHSLFLIRALTGPDMYSEIQFSQEGYLLWIETFEKGVQKNRCIFDDRGFLSSFLSC
                     DAHGQFAEHYYMTANGDWIMKEDLLLGGVTIHPDYAHRFKYAYYDNMPALIDEYINHY
                     KTKISSKDVIITASDVRHNPIISRHFSTQRLCFSVYQQRENALSDEGMASIKEGPYCL
                     IDTMENERRIADCGILSSETQKRLRITPFDVRITPNVSNQLHESLIGVWIDGIDQGRL
                     VTIVNYLINELECRPQTRVVFLTRREEYQVPEWIQAEVNRIQNFFKERHTESKVLQEF
                     PQKGKRDSIVYASLKSVPFEIDVAEAVSTLRLVIDLNEEPDLFLQICCLGAGLPQISR
                     METDYVKHGRNGYVISNDADLTEGIAHFLDYLKHWNQAYAYAMKLAKAYESNEILKML
                     DDWLEGETHEATL"
     gene            complement(23231..24454)
                     /gene="secY2"
                     /locus_tag="PTC28_000343"
     CDS             complement(23231..24454)
                     /gene="secY2"
                     /locus_tag="PTC28_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein translocase subunit
                     SecY2"
                     /protein_id="HDK5715664.1"
                     /translation="MKNNRITKIINQYEYKIFYKRIAFTILILLIYILGSKITIVDEN
                     AMRQHDSAFYKLAVSNMGGDIHQLNVFSLGLGPWLTAMIIISLITYKNMEKAMHQTRA
                     EKHYKEKFLTLGLSIIQGYFVINQFVRHTDAERFTELLLLLILVTGAMLMMWLADQNM
                     RYGIAGPMPIVLLSVIKSMFTQSLPIVSIEILMLVVMVILIIVALFILLLTELIEYRI
                     HYRDIIEMPTPGQPTYLAWKINPGGSISIMISLSVFLLLTSTINLIFNMVTGKTPHLQ
                     WLSFGHYMGVTIYLILQTVLGYLLSRLIVNTKQNTKDFLKNGNYFIGIRPGADTGNYL
                     NHLAKRLCWFGTTIVTAIIGVPLYISLLVPDLSEYIYFAVQLMIMVYLAMNITETMRT
                     YLYFDKYGAFLNQYW"
     gene            complement(24563..32179)
                     /locus_tag="PTC28_000344"
     CDS             complement(24563..32179)
                     /locus_tag="PTC28_000344"
                     /inference="COORDINATES: protein motif:HMM:NF012948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HDK5715665.1"
                     /translation="MKSESAAKVSESLSTSQSKVDSQSQSVSESASNSRVSRDSKSTS
                     ASMRRSLSESVSQSMSLIDQSESDSTSISISTSISDEDSMLYSMSDSASISTKASSSM
                     STSTSEEHANSHSQSESTASVEVSQEMSASASTSKSESQSESVSVSNEESNISSMQES
                     FVESAKASRSASMSVAKSEASESQLLSESNASVSQSASTSSKASASTSESISTSLSVS
                     EATHGKPRNHSESASASQLLEENESLSDSASTSVEDSESASASLSVYQSQSASALKST
                     HASEKASVNTSTNASKRASASTSISNSKSKVIASESKSTSISTYESLSISTSKEQSTR
                     VSVSESTSTSKVKSESDSASTSTSESISISANRSGYTSSKRSVQMSEAQSTSDSLSVM
                     QSEVSVSVSQSLSVSDKTSQSLSESISHSESDSDSNSVSISQETSEQHSVSDSDSTSI
                     SESESIAYSQSASESESTSIAKSDSISNSLSVSLSESESEASTSASVSTSESTSVKDS
                     LSTSILNSQSASTHQSTEASQSTSTSKVEEASLSDSASVSDSQSLSMSHEKSQSASTS
                     KSTSLSKTISESESVSASTSTSEAVSTEASEFVSAVDSLSQVTSNGSTTKEDASTFVS
                     TVDSLKDKASNNGTPSEFASAVKSTHASVSVSASESTSASTSTSEAVSTEASEFVSAV
                     DSLSQVTSNGSTTKEDASTFVSTVDSLKDKASNNGTPSEFASAVKSTHASVSVSASES
                     TSASTSTSEAVSTEASEFVSAVDSLSQVTSNGSTTKEDASTFVSTVDSLKDKASNNGT
                     PSEFASAVKSTHASVSVSASESTSASTSTSEAVSTEASEFVSAVDSLSQVTSNGSTTK
                     EDASTFVSTVDSLKDKASNNGTPSEFASAVKSTHASVSMSASESTSASTSTSEAVSTE
                     ASEFVSAVDSLSQVTSNGSTTKEDASTFVSTVDSLKDKASNNGTPSEFASAVKSTHAS
                     VSVSASESTSASTSTSEAVSTEASEFVSAVDSLSQVTSNGSTTKEDASTFVSTVDSLK
                     DKASNNGTPSEFASAVKSTHASVSVSASESTSASTSTSEAVSTEASEFVSAVDSLSQV
                     TSNGSTTKEDASTFVSTVESLKDKASNNGTPSEFASAVKSTHASVSVSASESTSASTS
                     TSEAVSTEASEFVSAVNSLSEATSNGSTTKEDASTFVSTVDSLKDKASNNGTPSEFAS
                     AVKSTHASVSVSASESTSASTSTSEAVSTEASEFVSAVDSLSQVTSNGSTTKEDASTF
                     VSTVDSLKGKASNNGTPSEFASVVKSVHGSMSTSASTSASASTSTSEAVSTEASEFVS
                     AVNSLSSEASNGSTTREGASTFVSTVDSLKDKASNNGTPSEFESVVKSVHGSMSTSAS
                     TSASASTSTSEAVSTEASEFVSAVSSLSSEASNGSTTREGASTFVSTVDSLKDKASNN
                     GTPSEFESVVKSVHGSMSTSASASTSASTSASTSTSEAVSTEASEFVSAVNSLSSEAS
                     NGSTTREGASTFVSTVDSLKDKASNNDTASEFESVVKSVHGSMSTSASASTSASTSTR
                     EAVSTEASEFVSAVSSLSSEASNGSTTREGVSTFVSTVDSLKDKASNNGTASEFESVV
                     KSVHGSMSVSASASTSASTSTSDAVSTEASEFVSAVDSLSQATSNGSTTKEDASTFVS
                     TVDSLKDKASNNGTPSEFASAVKSTHASVSVSASESTSASTSTSEAVSTEASEFVSAV
                     SSLSSEASNGSTTREGASTFVSTVDSLKDKASNNGTASEFESVVKSVHGSMSVSASAS
                     TSASTSTSEAVSTEASEFVSAVNSLSSEASNGSTTREGASTFVSTVDSLKDKASNNDT
                     ASEFESVVKSVHGSMSTSASTSASASTSTSEAVSTEASEFVSAVDSLSQVTSNGSTTK
                     EDASTFVSTVDSLKDKASNNGTPSEFESVVKSVHGSMSTSASVSASESTSASTSTSEA
                     VSTEASEFVSAVNSLSSEASNGSTTREGASTFVSTVDSLKDKASNNGTPSEFESVVKS
                     VHGSMSVSASASTSASTSASTSTSEAVSTEASEFVSAVNSLSSEASNGSTTREGASTF
                     VSTVDSLKDKASNNGTPSEFESVVKSVHGSMSTSASASTSSSTSTSDAVSTEASEFVS
                     AVNSLSSEASNGSTTREGASTFVSTVDSLKDKASNNGTPSEFESVVKSVHGSMSVSAS
                     ASTSASTSTSDAVSTEASEFVSAVSSLSSEASNGSTTREGASTFVSTVDSLKDKASNN
                     GTPSEFESVVKSVHGSMSTSASASTSASTSASTSTSEAVSTEASEFVSAVSSLSSEAS
                     NGSTTREGASTFVSTVDSLKDKASNNGTPSEFESVVKSVHGSMSTSASASTSASTSAS
                     TSTSEAVSTEASEFVSASASTSASTSASTSTSEAVSTEASESASISVSMSVSASTSAS
                     MSVSVSNSVSVSDSISVSASTSEPNSVSTSMSSSLSTSASTPSEITSSSSSSDSATVQ
                     KVVSKDEQHATNKVEKLPDTGQSTTQTGLLGGVGALLTGLGLLKKSRKQKDEETSSHE
                     "
     gene            34146..35033
                     /locus_tag="PTC28_000345"
                     /pseudo
     CDS             34146..35033
                     /locus_tag="PTC28_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220341.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cell surface protein"
     gene            36417..36713
                     /locus_tag="PTC28_000346"
     CDS             36417..36713
                     /locus_tag="PTC28_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715666.1"
                     /translation="MLSESLVDVLVDLLNDAESLSDTDVDVDALSESLVDVLVDLLND
                     ADALSESLVDVLVDLLNEAESLSDTDVDVDALSESLVDVLVDLLNDADSLAATD"
     gene            36801..37265
                     /locus_tag="PTC28_000347"
     CDS             36801..37265
                     /locus_tag="PTC28_000347"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715667.1"
                     /translation="MLFDLLNDADSLAATDWLLEIDCDFATLAERLNDVDFSALTELL
                     NDVLFDLLNDADSLAATDWLLEIDCDFATLAERLNDVDFSALTELLNDVLFDLLNDAD
                     SLAATDWLLEIDCDFATLAERLNDVDFSALTELLSDVLFDLLNDADSLAATD"
     gene            37353..37727
                     /locus_tag="PTC28_000348"
     CDS             37353..37727
                     /locus_tag="PTC28_000348"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715668.1"
                     /translation="MLFDLLNDADSLAATDWLLEIDCDFATLADWLCAIDFLTDNDFD
                     FLTEIACDLFAELDFLTESECDFLTEAAFDFLIQLDLFTESECDFAALSELLIDIDCF
                     LDNDIDRLSDSLAATDWLFAID"
     gene            complement(37753..37899)
                     /locus_tag="PTC28_000349"
     CDS             complement(37753..37899)
                     /locus_tag="PTC28_000349"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715669.1"
                     /translation="MRRVDQQVWQNHSRFQEVSQLRRVDQQVWQNHSRFQEVSRLHIA
                     DQQV"
     gene            complement(39674..39775)
                     /locus_tag="PTC28_000350"
                     /pseudo
     CDS             complement(39674..39775)
                     /locus_tag="PTC28_000350"
                     /inference="COORDINATES: protein motif:HMM:TIGR03715.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="KxYKxGKxW signal peptide domain-containing
                     protein"
BASE COUNT        10978 a         8344 c         7625 g        12916 t
ORIGIN      
        1 tccatattaa aaattgttgg aggtactgtt tatgtcatta ttcttattgg aaactcaaga
       61 tttatcattc gcaaaaacgc cagcagaatt agaagaaaag gtgcaatctc tttctgaaca
      121 agcaggtcca gaattgattg aagtacaagt cactgaagat ttatcacacg gttattttat
      181 cgttgaaggc catagcgaag aagaagcgaa acaattttta gaagatgggt ctattcaagt
      241 gagcctagtg aaagaagtcc gtctcgtcgg taaagattta gacgaagtga agcaaggtga
      301 cgtatctatc gactatttag tgacttggaa cattccagaa ggtattacga tggatcaata
      361 tttagaacgt aaaaagaaaa attctgtcca ttatgaagaa gtgcctgaag ttcaattcca
      421 aagaacttat gtttgcgaag atatgacaaa atgtgtatgc ctctataacg cacccgatga
      481 agattcggtg cgtcgtgcac gtgaagctgt gaatacacct attgacggca tcgaaaaaat
      541 ttaacgtcat tattgttatg gcgtcaatgc acaacgtcac atttgggagc gagaaatgag
      601 tagtcagtca gctatttgat tttagaatat cacatactgt cgatacctct ttctcgctct
      661 ttcttatcat tataatccct agtattttaa taagatttaa ggaagggtga tgcaatgatt
      721 gagattaaaa cgttacatca ttattttgga gaacaccatg tcattcaaga ctttaattta
      781 acgataccta aaggaaaaat tgtcagtttt atcggcaaaa gtggttgcgg taagtcgaca
      841 ctactcaata ttatcggtgg ctttttaaca cctacctcgg gtgacgttgt aatagatcaa
      901 acacgtaaga cagcaccgtc atcggattgt ttaatgttat ttcaacatca taacttgtta
      961 ccttggaaga cgattaacga caatattaag ctcggtttaa cgaaagatgt atcaaatgct
     1021 gaaatcaata catatttatc aacggtcggt ttagcacatc aaggtacgca attccctgcc
     1081 gcgctctcag gtgggatgca gcaacgtgtc tccatttgtc gtgcactcat tcatcaaccg
     1141 cgtgtcgtac tcttagacga acccctcggc gcactggatg cttttacacg ttacaaatta
     1201 caagatgaac tgatcaaatt gcggacacat accaatgcta cacttattct cgtgacgcat
     1261 gatatcgacg aagccctcta tttatctgat gaaattgtgc ttctcgggga tggggctcaa
     1321 attctcaacc aatataccat tcagcaatct cacccgagaa atcgcagtga tgaagcatta
     1381 ctatcgattc ggcgccaaat tatggaagat ttcgcactca atcatcatat ggcagagccg
     1441 gaatattatt tgtaaaggag cgagatttat gcaaaaaaga gcactgatct tattcattat
     1501 cgcccttttc attgttacag gatgcacgcc aaattctcaa aatcacgtca atcaagacaa
     1561 aaaagtactt aaaattggtt acctgccgat tacacatgcc gcgaatttga tgatgacgaa
     1621 agaaatcaaa cagaataatc cgaattatga tattgaatta gtgcgtttta acaattggcc
     1681 tgacttaatg gatgcactca atagtggacg gattgatggc gcttctactt tgatcgaact
     1741 cgcaatgaaa gcaaaatcaa aaggttcgcc aatcaaagcc gtggcactcg gacatcacga
     1801 aggcaatgtg gtgcttggtc aaaacggcca tgacttgcat gactttaaca acgacaataa
     1861 ttatatgttt gccattccac accgttattc cacccattat ttactattgg aagaaatgcg
     1921 caaacagctc catatcggcc atgaccattt tcattatcac gaaatggcac ctgctgaaat
     1981 gcctgccgca ctcagtgaac aacggattga tggttattct gtcgcagaac catttggtgc
     2041 acttggtgaa cagctcggta aagggcatct gttacaacat ggtagtgata ttatgcccga
     2101 tgcgtattgt tgtgtccttg ttctacaaga agatgtcatt caacaccatc atcaagctgc
     2161 acaacaattt gtaagtgact acaaaaaagc aggctaccaa ttagatgata aagccaaaag
     2221 tgtcgacgtt atgtcgaaat actataaaca agatcgcaaa atactggaac aatctgcaaa
     2281 atggacgtct tatggtgatt taacaatcca acaagagggc tatgataaca ttgcacaact
     2341 cgtaaaagcg catcacttgt ttgacgcccc atcatacgac caatttgtag acaactcatt
     2401 atataaggaa gggtgattca catgaccgcc aaacgattca aaaaatattt acgccctttc
     2461 tatacattcg cactcttttt attactttgg caatgcgtca tttggattgg acattaccaa
     2521 cctgtcttat tacctggtcc agttcatgtc gcacaaagta ttggcaattt catcattacc
     2581 ggggaaatat ttctacactt aggcattagt ttatatcgct ttattgtcgg ttttcttatt
     2641 gcggtgatgc tcgctattcc actcgggatt cttttagggc gcaatcgcat actttatcaa
     2701 gccattgagc cgttacttca gacgattcga ccgatttcac cgattgcatg gtcaccgttt
     2761 atcgtccttt ggttcggtat cggaagtttg ccagccattt tcattatttt tatcgctgcc
     2821 ttcttcccta tcatcttcaa cacgattaaa ggtgtacgca cgatcgacaa ccattattta
     2881 aaaattgctg acaacttgaa cttacacggg tggtcattat accgtgacat catttttcct
     2941 ggcgcattta aacacatcat gtcaggcatt catgtcgcag tgggtacgag ttggattttc
     3001 ttagtatcag gagaaatgat cggcgcgcaa tcaggactcg gctttctcat tgtcgactca
     3061 cgcaacatgt taaaccttga agatgtgtta tccgccatct ttttcatcgg tattttcggt
     3121 tttctgatcg accgtatcat tagttattta gaaagtctga ttttaaaacg ctttggagaa
     3181 tcttaatcaa taaaggagct acactatgac aacgattgaa actttaattg aacaagaatt
     3241 gaacccttac ttagtcgaaa ttgataacgg acaatattat gcacagccat tcattcaaca
     3301 tttatttgaa aacggccatt tttcaaaaga taatctaaaa caaaatgcgc aagtcgttga
     3361 aaaagtggcc tattcatgcc tgacaacagc gttttgttta tggtgccaac tcgccttttc
     3421 aacgtattta aaacaggcac aacaagcggc attacacgaa gatttacaac aacaaatttt
     3481 atccggccaa gctttaggcg caacaggctt gtctaacccg atgaagtcgt tcaatgcatt
     3541 agaaacattc aacttaacgc attactatga gggcgaccaa ttgatcgtga acggtaaatt
     3601 gccagcagta agtaatatcg gctatgacca ttatttcggt gctatctcac aaaatactaa
     3661 gacgaatgaa ctggtgatgt ttattttaca agcgaataca gatggcctca cacttgaaga
     3721 aaaaacgaat ttctttggtg tcaatggttc agccacttac agcattatat tcgacaacgt
     3781 agcagtaccc aaatcacaaa tcattacgaa agacgctgag aaatttgcgg caaccattcg
     3841 cccacaattc gtcgcattac agattcctat cgcattagga tctattcaaa gttcgctcga
     3901 tttaatcgat caattttcaa acgcacaaaa cggcattaat gcgtatttgg aatatgatgt
     3961 taaaaattac aaaaaacagt ttgaaacgtt acgtgaacaa tattatgcgt tattggacaa
     4021 ggcacaaggt gatttaaacg atcatttact cgaagtgatt caattaaaaa aagcgttagg
     4081 ttatttgtta cttgaagtga accaagcgtc aatggtgaat ggtggttccc gtgcctattc
     4141 acccaaagct ccacaagcgc gtaagttgaa agaaggcttt ttctttgcgg cactcacacc
     4201 aacattgcgt catttaggaa aactggaaga gacacttcag atgacgtaaa caattcaaac
     4261 gcgtcaccca atcaaaagtg aaatcaccct tttacaaaat aatacttttc ctcgggtatg
     4321 cctcaggtcc ccctcatttg tttgactatc atacaaaagt gtgggggagt tgaggcaagt
     4381 cttttggaaa atgcagacca aaggaagtcg tatcccgtat agcaaatata aggttcagca
     4441 atttgtaata ctccagtttt tgtacaacaa tgtatgcatc attgtgctcc ctcccgtcct
     4501 tccaaaacct cttatttaac atgtcgcata cgatgttcta tactaagtac atatcaaact
     4561 tacttctatt gccgacaaaa ggtggtccta tttatgcaag aaaaactttg gtcaaaagac
     4621 tttatcttca tcactttgat caacttttta atgtacatga ttcactatat gttgatggtt
     4681 acagtgacag tctttaccat tcatgaattc catgcctctg aaagtatcgg tggtctcgca
     4741 tccggtattt tcattatcgg tatgttattg ggacgactcg catccggacg tatagtcgat
     4801 tcgctccaac ctcaaaaagt gctcgtttat ggcgttattt tttcaattat tacagtggca
     4861 ctttatttcg tgattcaaac actctcacta ttattaattg tgcggtttat ccatggtatc
     4921 gcatttggtt tttcttctac agcgacaggt acgatttctt cacgtattgt accggaagca
     4981 cgtaagggtg aaggtatcgg ttactatgct ttaagtgtga caactgcttc tgctgtcgga
     5041 ccgtttttcg gtattttatt caaccaatca ttcggtttcc gctccatttt tacactcagt
     5101 ttaggagtaa tcattgtcgc atttgttctc gcacttgcct tgaaaccatt acctaaagta
     5161 gaaatatcta cagaaagcga accgttgaaa ggcattcgcg catttattca aaaagatgcg
     5221 attcccgtct ctttcgtctt agctgtcatt ggcgtcgcat attcaagtgt cctgtcattt
     5281 ttatctgtgt atacagaatc gataaattta ccgactgtcg cgagttactt ttttatcgtg
     5341 tatgcaatca cctcttttat cacacgacct tttacaggga aaatcttcga ccaacgcggg
     5401 cacaatgcta ttatgtatcc tgtcattgct atcttcgcga taggactttt catattgagt
     5461 agcgcgcaaa gtacatggct catcacgctg tccgctatat ttatcggtat gggttacgga
     5521 acgattgtgc caagcggtca agctatcgtc gtacaacaag caccgcgtca aaatgtaggg
     5581 cttgcgacat cgacatttta cattttctta gacttcggtg caggtttcgg tccattttta
     5641 ttaggctatc tcatttcatc atggggcttc cgtgcacttt acattgcgat ggccgtatta
     5701 gcacttgtcg cactcgtaat ctattatttc gtacacggac gccatgtcgc acaacattca
     5761 aaataaacat caaaggactc gccattcaat ggttgagtcc ttttcatttg gaagaccgtt
     5821 ttctcttcaa tcttacgttt ccattcctat accgaattgc ccaattgaaa attttttaat
     5881 ctcccatgta aacgactgaa aacagtgtgg ccactcaatt tatcatactt taaaaattgt
     5941 ctaatctttg tctattgtct gaaaatacaa attttttatt tttacaatca ttgtaactgt
     6001 gttatatttc atgtaagggc ttacataaaa agtgtaaaag gaggctctgc aacatgaaaa
     6061 tgtgtacatg ggcagcgatt ccgtcacttg ttaaaacggg tgatgtgatt ggtttggccg
     6121 cactgaccgt ttccaacttg cccgcagcac tactctcatc gttaattgaa cattacaatc
     6181 aacatcacga accgacacaa ttgacgatga tgatggcgaa tgacattagt agtcgtggtc
     6241 tggcaaccga attagatgac tttgttgagc ggcacatggt agaccgtgtc attatgagta
     6301 ttatgaccgc ttctcctcgc acagctcaag cgattaaaca taatgagttg gaggcgtact
     6361 ttttacctca aggggttatc gcaacacact atcgtcaaac gaatgcgatt acgccaggtg
     6421 tcattacaaa aattggtttg aatacccata ttgatccgcg ctatcaaggt gggcgcgtca
     6481 atgataagac gactgcatcc ctcgtctcat ttttgaacat tgatggcgaa gattttttgc
     6541 attatcaatt accaccatta gatgtcgcat tacttcgagg cacatacgcg gatgaacaag
     6601 gcaatattta catggacgaa gaagcacatc tcggtgaaag ttacagttta gcgctcaatg
     6661 caaagtccaa tggtggcacg gtcatcgtac aagtcaaagc tatcgttgat aaaggtcaac
     6721 aaaatccgaa ccacgtgtat attcctggat cacttgtcga ttacgtgtac gtcgttgaag
     6781 atacatcaca gcatcgtcaa gttgtccaaa cgatgtatca accaacgtta tccggacagg
     6841 cacgcattga catcatacct gagccgccac tcccgttcaa cgtccgaaaa ctgatgttgc
     6901 gacgtgcagc ccaattttta agtgttgggg acacgatgag tatcggttac ggtatcaaca
     6961 atgaattgac aaaccttctg catgaggaac acgtcaatga tttggttcag ccgattatgg
     7021 acattggtat tttcggtggt tttataggta gtcgtgaaca tttcgggatg aattacaatt
     7081 ccgacgtgcg catgcgtcac gaattaacgt gggactatat ctacaacggg ggtgtctcaa
     7141 ttgcattaat gagttttgcg gaggtcgacc aacatggcaa cgtcaacgtc tcctacttcg
     7201 gcaatcgcat gaatggttgt ggtggcttta tcgatattag tcaatctgta caaaagctga
     7261 ttttgaccgg cacactcatc gcaggcgcca agctcagtat agaaaaccaa caattgtccg
     7321 tagtggaaga aggtcataca caaaagtttg ttgagacagt gagtaacatt gatttcaacg
     7381 catcgtacgc caagtcatta catcaagaag tctttttcgt cacagaccgc gctgtattcg
     7441 aactgcaaga agacggcctc accttgatag aagtggcacc agggctagac atcgagcaag
     7501 atatcattgc tcaaatgggc tttacaccaa agatttcacc acaattaaaa gaggtagatc
     7561 ccacgatgta tcaagcaaaa tgggggcaat tacgacagat gattcagtca aacagaatag
     7621 tataaacaag ggggtataaa gagatgaact tcgattggat taaaacgcgt gcagattttg
     7681 atgtggagaa gcctgcagtc attgatcacc ttaaagggac acaatggtca taccaacagc
     7741 tgaatattcg tgcagatcat atggcacatt atctgacaaa acaaggcatt caaaaaggag
     7801 atgtcgtcgg tgtcctcgca ccaaatgatg tcgcattatt ggatttactg ttcgcctgct
     7861 tcaaaacggg agctgttttc ttaccgatta actggcggct caatcctaaa gaaattgcag
     7921 caattgtcga ggattcaact ttgaaactat tgttttacgc tgaaaagcat ttaagttcac
     7981 tgaatgaagt caacccaaaa tacttgcata tggatattga ttccgatgca tataaccaaa
     8041 ttgttgaccc ctcacaacat tctgtattta aagctattaa cgtagagtca accgaccttg
     8101 ccgctttaat ttatacaagt ggaacaactg gcgtacctaa aggggtcatg ttttcgtatg
     8161 aatccttcgt gcataatggt gccaatattg aactgacata taaattcaac tcagactacc
     8221 tcactattat ttcaactccg atgtttcatg ttttaggttt taacgataca gtgttaccga
     8281 ctctaatggc aggtggcacg ctcgtcttac aacgctattt taatggagaa gaacttaaca
     8341 acatgattgc gcaatatcac ccagactttc tcattatgat tccaacaatg tattacagca
     8401 cactaacaca agacaatttc aatccagaac attttagagc tatgaaatat gtgattcaag
     8461 gaggatcaca accattaccg agcattcaac aagcattcaa aaagcacggc atcaacatca
     8521 ttaacggtta tggtctcact gaagcaccgc tcgtgttggt taatacgcca gaaaatgccc
     8581 gacaaaaacc tatgagcatc ggaaaagcag tgatgtttgt cgatgcgaaa gtgttagatg
     8641 ataacaaaaa tgaagtcgga cttaatgaaa ttggtgaact agccattcgc gccaaaaatg
     8701 tcacacctgg ttattggaat aaacctgagg agacggccaa aatttttcac aatcagtatt
     8761 tactgactgg tgacttagct aaaaaagatg tagatggtga catttttatt atcgatcgta
     8821 aaaaagaatt gattattact ggtggcgaaa atgttcttcc atcagaagtg gaaaatgcac
     8881 tcgcggagca tccactcatt gatcgctgtg ttgtcgtcgg ttatgaacat ccgaaatacg
     8941 gcgagtctat tgcagcagcg atcattttaa gagagcaacc tgaggactat gttgaccaac
     9001 tcgaccaaca tatgcgtgag cgattagctg gatacaaagt gccacgtatg tatttaccgg
     9061 tcacacacat gccacttaat tcaacacaaa aaccagataa attagctatt acgaaaataa
     9121 tgaatgacaa agcacagcaa caaacatctg agcaataatc agctcatcat atcactatta
     9181 ggaggtttac ttttatgact acagataaaa aaaacacatt aaaacaattg tatcctgaag
     9241 atattttaag cattgcgaaa ggtttaacag acggtgaagt ggcattatta cagcaactca
     9301 atgacctatt agaaagtaaa taccgtcaag acatcaacca acattgggtc gatgcgacgg
     9361 tgcctgaaga ctattttcaa gatattggaa acttgaacta ttttacaaac ccacttcttt
     9421 atcaagggcg tgaagaagct aaaacaccga gccaattgtt tcaatttttc atgtcgtata
     9481 cgattgcacg ctttgatgtt tctttagcga cactgctcgg tgtacaccaa ggtctcggtc
     9541 ataatacatt tttattcggg ggcagctcag aacaagtcgc aaaatacgtg cctaaacttc
     9601 aatctcatga attacgcaca tgttttgcct tgactgagcc caatcatggt tcagatgtcg
     9661 cgggaggact tgaaacagtc gctgaacgtc atggtgatga atgggtcatt aatggtgcta
     9721 aaaaatggat tggtggagcg catgtgtctg atgtcatccc ggtctttgcc gtcaataaag
     9781 acacaggtaa accgcattgc ttcgtagtta aacctgagca agaaggcgta gagattgagg
     9841 tccttcaaca taaaatcgca ctacgtatcg tgccaaatgc tgaaattcga ctcaatcatg
     9901 tcaaagtgaa agaagctgac cgcctccaaa atattacaag tttcaaagac attgctaaaa
     9961 ttttatactc cacacgtgcc ggcgttgctt acatggcaac aggtgcactt gctggtacat
    10021 tacgtgcaac tctcagttat gtgaaagaac gtcaacaatt tggaaaatca atcagtcaat
    10081 atcaacttat ccaagaaaaa ctcgctatga ttcaaggtaa cttaactcac gcgatggcta
    10141 tgagtgcgca acttgctcgg atgcaagaaa atggtgaata tgatgaagta gcgacctcta
    10201 ctgcgaaaat gatgaatgca ctccgcttac gtgaatcagt cgcaatgggt cgtggcatta
    10261 ctggaggaaa cggaatactc gctggagaac acgatattgc acgctttttc tctgatgctg
    10321 aagcaatcta cacgtatgaa ggcacacatg aaatgaatgc tcttgtcatc ggccgtgcac
    10381 tgacaggtgt gtccgcattt gtataaaaag caattataag ccaaaaagcg aactatggga
    10441 ggaatatatg atgacaatta gaaaagtaac agtcctcggt gcagggacaa tgggggcaca
    10501 acttgctgca ctccttgtca atgcaggact caaagtaaaa ctcttagata tcgtcattga
    10561 tcacaacgac ccgaacaaaa tttcaaaagc agcgtacgat aaaatcacac atccgaaaaa
    10621 accgttacta tttgaccttg cacttgcgcc acatctcaca tacggaaatt ttgaagctga
    10681 cttagccaat gatgatgcgg atctttattt agaagccgtg aaagaagatt tagaagttaa
    10741 acatcagttg tggcaacaag tcgcacaaac tgcaaaacca gaagcattat ttgcgacgaa
    10801 tacgtctggg attccgattg aagcaattgc taaagcgttt ggtccagaag ataagaagcg
    10861 ttttttcggt ctacatttct tcaatccccc acgcattatg aaattagtcg agctcattcc
    10921 aaacgctgag accgacccga cgctcattga caacgttcaa acattcacac aagaagttct
    10981 cggcaaaggg gtgatcgttg tcaatgatgt cccaggattt gtagcgaatc gtatcggcac
    11041 gcaaacgatg aacgatatta tgtatcgtgc agagcaacaa ggtttctcga ttacagaaat
    11101 cgacgcgctc acaggtaaaa ttattggacg tccgaaaaca ggcacatacg cgttatctga
    11161 ccttgtcggc ttagacattg cagtatcagt cattcgagga ttacaacaag tgcctgaaga
    11221 acaaccctac ttccaagatg tcaagcttgt cgacacgctc tatgaagcag gtgcactcgg
    11281 ccgaaaaaca aaacaaggtt tctacaaaaa agcgcgcaaa caaaaacaac gtcttgtcta
    11341 tgatgtcgat gaacaagatt atgttcccct aacacaacca gagttaccta ttctcaccac
    11401 ttttactaaa gacttagcgc acaacttaga cgtgatattc aatgcaacag acagagctgg
    11461 tcaattttta tgggaaacgc tacgcaataa cttttattat gcagcacgca atgttccaaa
    11521 agcaaccgat gattttcaag acatcgatcg tgcacttgtt tggggattca attggaagtt
    11581 aggccctttt caattatggg acttgatggg atttgatcgt gtaaaaacgc gcattgaagc
    11641 agaacttggg actttacctg agtggattca acaaatagaa gatggctttt atggagagtg
    11701 tgaaacaatt gatgtcgtta cacctattga gcatcaactt gataaaattc tttggcaacg
    11761 taaagactca caactcgcta tcgtgaatgc acatcaactg ttgctgaagc ttagaagtta
    11821 caataacgtc attactgatg cttttaacga tgacttggtc gaagcgattg atatgttgga
    11881 aaatgaacct tattcaagta tggtgattta tgctgacggc ccacatttta gtgttggtgc
    11941 taatctatac gaaatgaaaa aagcatacga aacgaatcaa atcgataaac ggatcgcacc
    12001 ttcaattgat cggttacatg caagtttcaa tcgattaaaa tatagcgaaa aaccgattgt
    12061 cactgccatt catggtcgtg tactgggtgg gggttgcgaa cttgccctcc actctccatt
    12121 catcgtagca agtagtgaaa catatatggg ccttgttgaa gcaggggtcg gcctattacc
    12181 aagtggtggt ggcctcgcag aaatgagtga ccgtatttta aaaacaacac atatgatgaa
    12241 cgacaaacaa gcaagcatga cacaacttct tatgacagta ggcttagcga aagtgtcaac
    12301 caatgctttt gaagcacagc gttatggctt cttacgacca acagacacca ttattttcaa
    12361 tcaagaacgc cgtgtccaaa tcgctttaca acgtgcacaa tacgaggcag atgcacatta
    12421 tatgccagcg gctgaaagac aatatcttgc actaggcaaa gattttctct cactcgccca
    12481 aggacagctt gatgcccaac gcctcggcca ctatatcagc aaacatgatt atgacattgc
    12541 gttacgtatt gcaacagttt tatcaggtgg tgacttacca cgcaatacgt atattcaaca
    12601 acgttacatt caacaattag aaaaagtgca tttcttagaa cttatcaaaa ctgaaaaaac
    12661 gtatgacaga atcacatata tgctcgaaaa tggaaaaccg ttacgaaact aatttaaata
    12721 gagaggatga ttggcatgag agaagcttat atcgtcgctt atggccgttc tgcagtcgct
    12781 aaagcaaaaa aaggtgcgct ttttcatgaa cgaccagatg atgttgcagc agaagtatta
    12841 aaaggggtcc tcaatcgtat agatggcgca tttcaccctg atatggttga agatgttata
    12901 gtcggtaatg cattcccaga aggactacaa ggtcaaaata ttgcaagaac cattgcgtta
    12961 cgtgctggcc ttcctaatag tgtgcctggc caaaccgtta atcgttattg ttcatctgga
    13021 ttacaaacga ttgcactcgc tgcaaaccaa atcatggctg gtcaaggcga tattctcgta
    13081 gcaggcggca ttgagttcat gagtgctgta cccatgggtg gaaatgaacc aaccaacaac
    13141 cctacattac aacaacaaga tgtaggggcg tcatatccaa tgggactcac tgctgaaaat
    13201 gttgctgaga cgtaccaagt agaaagagaa gaccaagatg cttatgctgt tcaaagtcat
    13261 caacgtgcaa cagaagccca gcaaaaaggg aaattcacag atgaaatcat ccccattcgt
    13321 gtcaacaaag tcagttacga tgagaacggt ccacgtgtcg atacagaaat atttgatacc
    13381 gatgagctag tgagacccga tacgcatgtg gaagcgctat cacaattacc gactgtattt
    13441 aaagctgatg gtaccgtgac agctggaaca tcagcgccat tatcagatgg tgtcgggttt
    13501 gttgtactca tgtctaaaga aaaagtaaca gcattaggtg tcacgcctat cgcaaggttt
    13561 gtgggctata aagcagtggg cgtcgatcca aagttgatgg ggattggacc tgcttttgcg
    13621 attcctgaag tactagattt aacacattta accattgacg atatcgatct cattgaacta
    13681 aatgaggctt ttgcatctca aactatcgcc tctatgcgtg aagtcgggtt gtctgaagaa
    13741 aaaacgaatg tgaatggtgg tgccattgct ttaggacatc cgttgggcgc aacaggtgct
    13801 attttaacag caagattgtt ggctgaaatg aaaaaacgct caaatgtgcg ctatggcatg
    13861 gttacgatgt gcatcggtgt cggtatgggc gcagctggtg ttttcgaact ggtttaaaaa
    13921 gcgacttatt aggaaaggga ctggacaact cattgtttgt cctagtccct ttatcgtttt
    13981 aagctttgaa tatttgatta aaggcctcta ttgtcgtttc attagcatga tcttgttgat
    14041 attgtaagcg tagtttaaaa taacgctttt tgagattgat atcttttaaa gcttctatta
    14101 aagcactggc atccttttct ttttcaaata aattttcagg tgctgtgaaa cgacgattat
    14161 gtgcaatgtc actataacct aaaatgagca tgttaaaatc aaaggccttt ttgacggcat
    14221 tgataatttc tccaccgtta ttaatatcta agtaaacatc acatttacga taaactgttt
    14281 cgacagtatc caattcaatc gcttggtata aatgcacatt cgcgtaacgc tcaaatgctg
    14341 tcaacttaga tgacatctct gttaccgcac caatatgaaa atgagcgaat gggcaagatt
    14401 gtacaatcgc ttctagattt tcaatttgat ccgagttagt catagttaaa atgttcatgg
    14461 tgtaattatt ttctgattga tagttgtata aataaccact gtgcgcaata aattgacgtt
    14521 cttcatctgt caattgtgca tagatgtttt catattcttc acgctcaggt attaaaattc
    14581 gacaatgacg tggtgtgtct ctttcaagaa tcacacgcat attaccagga atttcgccat
    14641 aagatgtttc ctgccagaat aaaatatcat ttcctggtat atctaattga tacagtatca
    14701 aaaatggtgt actcagcgaa ttgataacaa tgttttccaa attaacatca attgccttta
    14761 ggaaaaacgt ataaaaatcg atactatcgc taaaatgata ctgctcacct ttccacgtta
    14821 aaattacact tgaagcgaca aaattttcat aaatcacttc gttgccttgt tgatccaaat
    14881 agcggcgaaa aatcatattt cctgtcaaat cgtatactgt ttgtgcataa cgaaaaccat
    14941 gttgattgta atgatcaaca tactgaagtt ggccttttcg attgagccat tccacatgac
    15001 tgacaaggcg acgtttctct gacggatgaa aatatatcat cgcccgtcga tcactcatat
    15061 ctttaaccca cgcttcatca ttgttccctt caatctccca aaagcgtggc acaggaactt
    15121 cgttaaaata tcgtgcgcgc tgtttgtcag ggacttgata atttgcaaag aattgatacg
    15181 gtgaacgaat gccctctggt aaaaatccat catcaactaa aacaattgtc tcatcatggt
    15241 gacccgatat ccttaacgtt tcgtatagtt cacgtgtatc actgttaaaa tactcaaata
    15301 aattaaccat gtaacacctc ttctattaat tctttccatt tttgtcgcgt attctctatt
    15361 aaatatggcg tcgcaatcgc atacgatgtt tcatgagggt caacaggtcc atcattgaaa
    15421 aagcgaatga ttgcttgagc taaactgtca attatttttt cattactatc ttctttaact
    15481 tctataggca caagataacc attttttcca tctctaataa aggttggatt gccataattc
    15541 acatcaaagc caatcatccc taaacctgaa cctacagctt ccataagggt aaggccaaac
    15601 ccctcacttg ttgaagccgc aacaaacaat ggataattct tataaatatc atctagtttc
    15661 tgatgtccca gcaaccggat ataatcgtgt gcgcccagtt tttcaatcca gttttcaatg
    15721 gactcacgtt ccccgccttc accataaata tcaaaagtga gttcaggtac ctctttcttc
    15781 gcaatactcg cagcacgaac cagccaatca atatgctttt cacttgctaa tcttgaagca
    15841 gtcaccatgc gatatgcatg tcgcggtgac gctggcttgt taagttgatt taaactccct
    15901 actggtactg tataaatcgg tggctcagcg ttgagatatt gcttgaattg ttgtgacaat
    15961 atctcatttt gacgttctgt agcagtaata tagaaatcaa tctcttttac atttgtaaat
    16021 tgatattcat aataattgtt ccacaaaatg tgatcctcgt ccgtcgcatt ttcactgaag
    16081 tgttccgcat gcactacaac gcctacttta ctatcccctt tattttggag catcgcttgt
    16141 cctactttag ttgcacgatc ataaatgaca atatcttcag atgttagctt taagttttga
    16201 ataaagtatg cgacaaattc ctcttttgta taaaatagtt gatctttaaa cgcataaaca
    16261 tgagtaccct catcaatata ctctgtgtaa acaaccgaac catcttcatt ataataatgt
    16321 ctcatgtata acttagcttt ttggtcagcc ggagcataat actctgaaaa agttcgtgtg
    16381 tagctataat aatcttttcg taccaatttg ttattaatca caaattctgc gcaatccaca
    16441 taaggttcat cttcattctt taaataacat gtaataaagc tgcccggttg ttctaaatat
    16501 aaccatcgca cagaaccgtc tacttcttca cgaaccactt cttcatggat agaagacttt
    16561 atatcgtcaa ttgtatatgt ggtgggtgca attttaatgt ctgtaaaata ttgatatagc
    16621 catatcactt catcatcttg aaaacccaaa ttggatgtta aagtttgtat gttttctgaa
    16681 ctcataaaat ctaaaaatac aaatttcaaa ggaacatcaa gcccgcgtaa cgcttcagcg
    16741 cgatactttt gcgcatattc tactccacta cttgcccatc caataccgaa attaatatta
    16801 taaattgtca tgctctcatc acctctctaa tttggaaaat gcacgattaa atgtcgatca
    16861 tcttcttttt ccgttatact ttgacaaagg tactttacaa tgtctttttt aatagcatct
    16921 gtcatcagtt caaatgattc taatgcgact ttgtgatact cgaaaatggg attacgctta
    16981 ccattttgtc tagtgttcac actattcttt aacctttgta aatggtcaac ttgtttaatc
    17041 caattactgt ctatcgcttt taatatcgct ttttgcacaa agtacgtgta aaaatagtca
    17101 tctagatgct gtctttgata tgctaattgc tgtttaaata atttgagaag atattgagtt
    17161 accgcgttaa tatctctcag atctacacct tcgagttgtc ccttatattg aaaacttaaa
    17221 tttttataaa tatagtccac ccattcagaa acagtgaaat gtgtgtgttc aaatgcttct
    17281 tcaaaaactt ctaacgcaag ttgctctaac tggatctctt ccaagccttt aaattgcaac
    17341 acacgattac gttctttata aaccagttct ctttggacac taatactttt ttcatgttca
    17401 ttcgaagttt ctcttacttt gatgccctgt tcttcagaaa gtcgctgagc acgtttgaca
    17461 atttttctta catgcttttg gaaaaggcga ctgttttgta acgtatgagt atcgaacttt
    17521 tctagtcgct ttatccgtga tatctgatga tccgaccacc gtttgacgag gtagtcttct
    17581 aaagaaatat aaatttgtgt tgtccctgga tcaccttgtc gtcctgaacg tccccgtaac
    17641 tgacggtcaa tacgactatt ctccatatgt tcactgataa tgactgccaa tccgcctagc
    17701 tcaggaacac cttcagctaa tttgatatcc gttccacgac ctgccatact tgttgctacc
    17761 gttacagcac gcaactgtcc cgcttcagca atcatttgcg cttctttcgc aacgttttgt
    17821 gcaatgagta gattattagg aatatcgagt gcaaacaatg ctgctgaaaa atactcagca
    17881 ctttctgcag tacgcgtaat gagtaataca ggacgttgtt ctgtataaag cgttttcacc
    17941 cgttcaataa tcgcttggtg tttatcttca atgtttttaa atacgcgatc aggatagtca
    18001 atgcgttgta tcgggcgatg agttggaatt tgaatgacaa cttttgaata taaatctaaa
    18061 aactcttttt caccaaggtg acttgtggct gacattcccg caaacacatt aaattgcttg
    18121 aacaagtttt gaaaagtaat cgtagccatg acactcatat ccatagacat ttctacattt
    18181 tctttcgctt cgatagcttg atgtaaacct gattgtaatt tagtgccgtg catcattcgc
    18241 ccgttaattc gatctatcag tacgacttct ccttgataaa caaaatagtc catattattt
    18301 tcgaataaaa actgtgcacg taaacataga ttaatgttac gaactaagtc aaaataaggc
    18361 gcatcataaa tattgtccac gccaaaataa gcgtttgctg cttcaatgcc atcagctgtt
    18421 aaccaaatct ctttttttgt ttttttcatc ttaaaatgac gtttgttttc gagtgtttga
    18481 acaaatgtat tgactacctg aaacaagtta gattgcacac gtggtgcacc tgaaataacg
    18541 agcggggttt gagcggagtc taaaataatt gaatccacct catcaatgat gccatagttc
    18601 aatgtaggca agaacttacc ttcacgagat tctgctaaat tatcgattaa ataatcaaac
    18661 cccaaacgcc ctcctgttgt ataaataatg tcatgttgat aaatggcttg tttttcacct
    18721 ttctcatatt cataatcagg aatatccaca aaccctaaag caatactaag tcccaaccat
    18781 tcgaaaaggg gcttcatctc catgtaatcc ctttttgcta aataatcatt tgtcgtgatt
    18841 aaatacgctc ctttaccagt aagtgcattt aaatataatg gcatcgtcgc agtcaatgtt
    18901 ttaccttcac cggtttgcat ctctgcaatg tttccttcgt gtaatacgat tgccccaagc
    18961 acttgaacat ctttaggaaa catacctaag acacgtcgac tcgcttcacg tacaagtgca
    19021 taagcttcag gtaaaatggc ttcaagtgtc gtctcttttt gtaataattg acgcttaaaa
    19081 gttactgttt tttgttgcaa cacatcatct ggtagcattt gaaatggttt ttcatattgc
    19141 tgaatacgtt ttaaaatacg ctttaaacgt ctcaaccgca tcttgttaat tgttttatgc
    19201 agtgactgac tcattcaatc tgacctccat tcaacctttg tacattgagc cctcgtaatt
    19261 gatgactctt attcaataca gcatctaacc actgacacga ctgagtaacc gtttcattgc
    19321 cctgatagat gactattgta ctgttttgtg catcatggat atttggcgcg ttttcttgag
    19381 cattatctgt atcagaagtc acaaaaatcg ttgctttgag atggctacca atcagtttcg
    19441 ccatcttatt tgaacgttta tcataaccga ccaactgaca gcgatagccc tttgtttttt
    19501 ctttgatcat ttcaactaaa tgcgtgattt catatgttga tgctttaaca tcccaccctg
    19561 tcacaagcat acaattttgg atccccttga ttaattcaga gtccaaacct tcttttggtg
    19621 caaaaatcaa tgtagtccta gccacattgg catttggatt ttgcatacta ctgattctaa
    19681 ccccatcttt tcggtgtatt tcaagccgag cttctttaat agtaatttga cggaacatca
    19741 attgtgttga tgcagcattt atcatctgta tgacatatga aaacgtatct tcagggactg
    19801 tcacatctgc ctcatgtgtt ttaataattt gaaagccaca tgtggtgcca ttacgtcttt
    19861 taaaaatcac tttgaaatag atgctattct caggttgtac atcgtaatca aaataaaaat
    19921 ggtaggtaca attctttttt aggataggta agtctggaac attcacgtct gtttgaaagt
    19981 ctgtcatcat tttccattca tgaatgacaa tcccagaagg cattaaagca ttttcaaata
    20041 aggcgcctgt cgaggaccat ttcaattttg taccgtacat aaatgtgtct ttcgtgacat
    20101 gagtccaccg aatattaaat ggatgtttat cgctcatctc tcactctccc aaactggctt
    20161 tccataatca taaaataaaa gtgactgaac caactcgtaa tcgtaggcgt atcatcatta
    20221 tgacgccctg gtgcacttcg actcatcacg cgcgcacctt gacgagataa aactgacaaa
    20281 agattttgga atgcatacaa atcgtaatca tcatgttcca tataagaaat cgcaaagagt
    20341 gtctggtcga tttgattttg attcagtgtc gtccaaaatt tttgattcag tcgttcaatg
    20401 gcttcatcat ctaagcctct ttcatttgtc aacaaaatat caagtgcggt accgaaatct
    20461 tctggtcgca ttaacctcat attttcagct atccctccta tattgacgag gggttttccc
    20521 actacaatag cggctggatt gagttgtgca ccataataga gtgcaccaaa agaacccatt
    20581 gagagtccag acatgatcat ttcatcttct ttaaaaccta accactctaa tgtgtcttgg
    20641 atgacctttt taatttgatt ctcaaaggca tcgtttccta aataaaatcc accaccctcc
    20701 aatctcaaat cactaataag taaaaatggc gccttaaatt tctccatcat atagtaacct
    20761 tcaaatcctt cagcagtacg gtaaccacta aagtaaacat ttaatggcgg ctttaaatca
    20821 cctggatgga aaaaatggat gaattctcct ctatcttcac cactccacct ttgtccacct
    20881 aagataaact gcccatgttc catacgagac catctcttgt gaatattacc tactttgagc
    20941 gtaccttccc cttttgcttt tgcagtcaca aagatatagg catctttgtc catgctcggg
    21001 atggcaaaag gctctatcaa acgctcgcct tccaacacaa attcgcgaat taagttgtcc
    21061 atattaagat tttcatataa gcgtaatgta taagacactt cgacatgggg tgatgatgtg
    21121 tactcgagcc atatttcatt gactttgtat ctgtcgtaat aaagatacat gttccaactc
    21181 agaatcggcg tgtacgtctc accaaaattt ccttttagca caagttgatg ccttccctca
    21241 taatacgtct ctcctttaaa aagtgggttg actttacaat gaatagggtg aatccgatcc
    21301 ccatattgtt tactaaaagc aagtgccatt aatcgtttga tacaatcttc ttctgaatca
    21361 taagaaaaac aacgaataaa gcgtgtacga acaacctctt ctgcttcaaa aaaactattc
    21421 caaaatcgtt ggtcgacata agtgttgtag ggttgactga ctaatctgaa tgcttgcatt
    21481 aacatctctg aataagggac ctgaacaaaa acaaaatcaa attgtttttc ttcttctact
    21541 aactttttta attcttccaa atctgataat gaatcaagtg gcatagaggt ccaactcact
    21601 tcatctctgt ctttaaaatg tgaagcataa ttatccccac caatttgtaa cattttataa
    21661 cgttgcttca tgtgtttcac cttctaacca atcgtccaac attttcaaaa tttcattcga
    21721 ttcatatgcc ttagcaagct tcattgcgta cgcataggcc tgattccaat gttttaagta
    21781 gtctaaaaaa tgagcaatcc cctcagttaa gtcagcatca tttgaaatca catagccatt
    21841 cctaccgtgt ttgacataat ctgtttccat acgggagatt tgtggtaatc ctgcaccaag
    21901 acaacaaatc tgtaaaaata aatccggctc ttcattcaaa tctatgacta gtcttaatgt
    21961 cgaaacagcc tcagcaacat cgatctcaaa tggtacagat ttcaatgaag cataaacgat
    22021 actgtcacgc tttccttttt gcggaaattc ttgcaacacc tttgattcag tgtgccgctc
    22081 tttaaaaaag ttttgtattc gattcacttc tgcttgtatc cattcaggga cctgatattc
    22141 ttctcgtcgt gtaagaaaaa ccacacgtgt ttgaggacga cattccagtt cattgatgag
    22201 gtaattcaca attgttacca atcttccttg gtctatacca tcaatccata ctcctattag
    22261 actttcatgt aattggttgc tgacattcgg agtgatacgt acatcaaaag gtgtaatacg
    22321 aagccttttc tgggtctccg aggataaaat accgcaatcc gctatacgtc gctcattttc
    22381 cattgtgtct attaaacaat atggaccttc tttgatagac gccatacctt catcagatag
    22441 tgcattttct ctttgttggt agactgaaaa gcatagtcgt tgcgttgaaa aatgacgtga
    22501 aatgattggg ttatgtcgga catctgatgc tgtaataatg acatctttac tgcttatttt
    22561 ggttttgtaa tggtttatat attcatcaat aagcgctggc atattgtcgt aataggcata
    22621 tttaaaacga tgagcataat ccggatgaat agtaacacca cctaataaca agtcttcttt
    22681 cataatccag tcgccattcg ctgtcatgta gtaatgctct gcgaattgac catgagcatc
    22741 acatgataaa aagcttgaaa gaaagccacg atcgtcaaag atacaacgat ttttttgaac
    22801 acccttttca aaagtttcaa tccacaaaag atacccttct tggctgaatt ggatttctga
    22861 atacatatct ggccctgtaa gtgctctaat taaaaatagt gaatgtacaa attctgtacc
    22921 attcggccaa ttaaattgac gataatctat aggacgcggt gtttgatgcg taaatccttg
    22981 aatttcatca aataatgacc agtatgtcgc ttcaaatagt tcctgccgat gtaaaaacaa
    23041 gcgtaaattt ggtgaataat taagcaccat catttcaaat ggagctttat tttttaaatg
    23101 aatgttcatc agactaatta attcatcaaa ctcattcact tttaacgttc tatgaaaagg
    23161 aagggcttga ctcctccacc aatcatcagt tgtgtaccaa gcaggtataa aatgtttcat
    23221 aaaatgctcc ttaccaatat tgatttaaga aggcaccgta tttatcgaaa tataaatagg
    23281 tcctcatcgt ttcagtaata ttcattgcca aatacaccat aatcatcagt tgcacagcaa
    23341 aataaatata ttctgacaag tctggaacca gcaatgaaat gtacaaaggc acgccaataa
    23401 tagctgtaac aatggtagtt ccgaaccaac aaagacgctt agctaaatga tttaaataat
    23461 ttcctgtatc tgcacccggc ctaattccaa taaagtaatt accatttttt aaaaagtcct
    23521 tggtattttg tttggtgttt acgattaagc gtgataacaa ataacctaag acggtttgaa
    23581 gaataaggta aatcgtaaca cccatataat gcccaaaaga caaccattgt aaatgaggtg
    23641 ttttcccagt aaccatatta aaaataagat taatcgtact cgttaaaagc aaaaatacag
    23701 ataaactaat catgattgaa atacttccac cagggttgat tttccatgct aaataagtcg
    23761 gttgccctgg agttggcatt tcaataatgt ctcgatagtg aatgcgatac tcaatcaatt
    23821 cagtcaaaag taatataaat aatgcgacaa ttattaatat caccattact actagcatca
    23881 aaatctcaat agatacaatt ggcaaacttt gcgtaaacat tgatttaatc acgctcaaca
    23941 acacaatagg catcggcccc gcaattccat agcgcatatt ctgatctgca agccacatca
    24001 ttaacatggc acctgtaacg aggataagta gaagtaataa ctcagtgaat ctctcagcat
    24061 ctgtatgtcg aacgaattga ttaataacaa aataaccttg tatgatgctt aagcctagcg
    24121 ttaaaaactt ttctttataa tgtttttctg ctcgtgtttg atgcatggct ttttccatat
    24181 ttttatacgt tatcaaactg atgataatca tagctgtcaa ccacggtcct aatcccaatg
    24241 aaaatacatt taattgatgt atatctccac ccatattaga aacagctaac ttgtaaaaag
    24301 cgctatcgtg ttgacgcatg gcgttttcat caacaatggt tattttactg cctaatatgt
    24361 atatcaataa tataagtatt gtgaatgcta ttcttttgta aaaaatcttg tattcatatt
    24421 gatttataat ttttgtgatt ctgttatttt tcactttaac cctctttttt caaacatggt
    24481 gtcaaagagg ctaactatct ctttgacaaa tcatgttata taaacatgaa gctagcctct
    24541 ttaaccatgc ttaaactatt tattattcat gtgatgatgt ttcttcatct ttttgttttc
    24601 ttgatttttt gagtaaacca aggcctgtaa gtaaagcacc tactccaccc aataaaccag
    24661 tttgtgtcgt tgattgacct gtgtcaggta atttttcaac tttatttgta gcgtgctgtt
    24721 catctttaga aactactttt tgaactgtcg ctgaatcgct tgatgacgaa cttgaagtaa
    24781 tttctgatgg cgttgatgcc gatgttgaaa gagaactact catagaagtg cttaccgagt
    24841 taggttcact tgttgatgca cttactgaaa tagagtcact cactgacaca ctgtttgaca
    24901 ctgatacgct cattgaagca cttgttgatg cgctcactga cattgataca cttatcgatg
    24961 ctgactcgct tgcttctgta cttacagctt cgcttgttga tgttgatgct gacgtacttg
    25021 ctgacgttga cgcacttgct gatacaaatt cacttgcttc tgtacttaca gcttcacttg
    25081 tcgatgtcga tgctgatgta cttgccgacg ttgacgcact tgctgatgta ctcattgatc
    25141 cgtgtactga cttcacaact gattcaaatt ctgatggcgt accattgttc gatgctttat
    25201 ctttcaatga atctactgtt gatacaaatg tgcttgcacc ttctcttgtt gtgctaccgt
    25261 tcgatgcttc actgcttaat gagctcactg ctgatacaaa ctcacttgct tctgtactta
    25321 cagcttcgct tgttgatgtt gatgctgacg tacttgctga cgttgacgca cttgctgatg
    25381 tactcattga tccgtgtact gacttcacaa ctgattcaaa ttctgatggc gtaccattgt
    25441 tcgacgcttt atctttcaat gaatctactg ttgatacaaa tgtgcttgca ccttctcttg
    25501 ttgtgctacc gttcgatgct tcactgctta atgagctcac tgctgataca aactcacttg
    25561 cttctgtgct tactgcatca cttgttgatg tcgatgctga tgttgacgca cttgctgata
    25621 cactcattga tccgtgtact gacttcacaa ctgattcaaa ttctgatggt gtaccattgt
    25681 ttgatgcttt atctttcagt gaatctaccg ttgatacaaa cgtgcttgca ccttctcttg
    25741 ttgtgctgcc attcgatgct tcactgctta atgagttcac tgctgataca aactcacttg
    25801 cttctgtgct tactgcatca cttgttgatg ttgatgacga cgttgacgca cttgctgatg
    25861 tactcattga tccgtgtact gacttcacaa ctgattcaaa ttctgatggc gtaccattgt
    25921 tcgacgcttt atctttcagt gaatctaccg ttgatacaaa cgtgcttgca ccttctcttg
    25981 ttgtgctgcc attcgatgct tcactgctta atgagttcac tgctgataca aattcacttg
    26041 cttctgtgct tacagcttca cttgtcgatg ttgatgctga cgtacttgct gacgttgacg
    26101 cacttgctga tacactcatt gatccgtgta ctgacttcac aactgattca aattctgatg
    26161 gtgtaccatt attcgatgct ttatctttca atgaatctac tgttgataca aatgtgcttg
    26221 caccttctct tgttgtgctg ccgttcgatg cttcactgct taatgagttc actgctgata
    26281 caaattcact tgcttctgta cttacagctt cacttgtcga tgtcgatgcc gacgtacttt
    26341 ctgatgctga cacacttgct gatgtactca ttgatccgtg tactgacttc acaactgatt
    26401 caaattctga tggcgtacca ttattcgatg ctttgtcttt caacgaatct actgtggata
    26461 caaatgtgct tgcatcttct ttcgttgtgc ttccgttaga agttacttga ctcaacgagt
    26521 ctactgctga tacaaattcg cttgcttctg tacttacagc ttcacttgtc gatgttgatg
    26581 ctgacgctga cgtacttgct gatgtactca ttgatccgtg tactgatttc acaactgatt
    26641 caaattctga tgctgtatca ttgttcgatg ctttatcttt caatgaatct actgtggata
    26701 cgaatgtgct tgcaccttct cttgttgtgc tgccgttcga tgcttcactg cttaatgagt
    26761 tcactgctga tacaaactcg cttgcttctg tgcttacagc ttcacttgtt gatgtcgatg
    26821 ctgatgttga cgcacttgct gatacactca ttgatccgtg tactgacttc acaactgatt
    26881 caaattctga tgctgtacca ttgtttgatg ctttatcttt cagtgaatct accgttgata
    26941 caaacgtgct tgcaccttct cttgttgtgc tgccattcga tgcttcactg cttaatgagc
    27001 tcactgctga tacaaattca cttgcttctg tgcttacagc ttcgcttgtc gatgtcgatg
    27061 ctgatgtact ttctgatgct gacacactca ctgatgcgtg tgttgatttc actgctgacg
    27121 caaactctga tggtgtacca ttatttgatg ctttgtcttt caacgaatct actgtggata
    27181 caaatgtact cgcatcttct ttcgttgtgc ttccgttaga agttgcttga ctcaacgagt
    27241 ctactgctga tacaaattcg cttgcttctg tgcttactgc atcacttgtt gatgtcgacg
    27301 ctgatgttga cgcacttgct gatacactca ttgatccgtg tactgacttc acaactgatt
    27361 caaattctga tgctgtacca ttgtttgatg ctttatcttt cagtgaatct accgttgata
    27421 caaacgtgct tacaccttct cttgttgtgc tgccattcga tgcttcactg cttaatgagc
    27481 tcactgctga tacaaattca cttgcttctg tgcttacagc ttctcttgtc gatgttgatg
    27541 ccgacgttga cgcacttgct gatgtactca ttgatccgtg tactgacttc acaactgatt
    27601 caaattctga tgctgtatca ttgttcgacg ctttatcttt cagtgaatct accgttgata
    27661 cgaatgtgct tgcaccttct cttgttgtgc taccgttcga tgcttcactg cttaatgagt
    27721 tcactgctga tacaaactca cttgcttctg tacttacagc ttcacttgtt gatgtcgacg
    27781 ctgacgtact tgccgacgtt gacgcacttg ctgatgtact cattgatccg tgtactgact
    27841 tcacaactga ttcaaattct gatggtgtac cattgtttga tgctttatct ttcagtgaat
    27901 ctaccgttga tacaaacgtg cttgcacctt ctcttgttgt gctgccattc gatgcttcac
    27961 tgcttaatga gctcactgct gatacaaatt cgcttgcttc tgtacttaca gcttcacttg
    28021 tcgatgttga tgctgacgct gacgtacttg ctgatgtact cattgatccg tgtactgact
    28081 tcacaactga ttcaaattct gatggcgtac cattgttcga cgctttatct ttcagtgaat
    28141 ctaccgttga tacaaacgtg cttgcacctt ctcttgttgt gctgccattc gatgcttcac
    28201 tgcttaatga gttcactgct gatacaaatt cgcttgcttc tgtacttaca gcttcacttg
    28261 tcgatgttga tgctgacgct gacgtacttg ctgatgtact cattgatccg tgtactgact
    28321 tcacaactga cgcgaactct gatggtgtac cattattcga tgctttacct ttcaacgaat
    28381 ctactgtgga tacaaacgtg cttgcatctt ctttcgttgt gcttccgtta gaagttactt
    28441 gactcaacga gtctactgct gatacaaatt cgcttgcttc tgtacttaca gcttcacttg
    28501 ttgatgttga tgctgatgta ctttctgatg ctgacacact cactgatgcg tgtgttgatt
    28561 tcactgctga cgcaaactct gatggtgtac cattatttga tgctttgtct ttcaatgaat
    28621 ctactgtgga tacaaatgta cttgcatctt ctttcgttgt gcttccatta gaagtcgctt
    28681 cactcaacga attcactgct gatacaaatt cgcttgcttc tgtacttaca gcttcacttg
    28741 ttgatgttga tgctgatgta ctttctgatg ctgacacact cactgatgcg tgtgttgatt
    28801 tcactgctga cgcaaactct gatggtgtac cattatttga tgctttgtct ttcaatgatt
    28861 ctactgttga tacaaatgtg cttgcatctt ctttcgttgt gcttccgtta gaagttactt
    28921 gactcaacga gtctactgct gatacaaatt cgcttgcttc tgtacttaca gcttcacttg
    28981 ttgatgttga tgctgatgta ctttctgatg ctgacacact cactgatgcg tgtgttgatt
    29041 tcactgctga cgcaaactct gatggtgtac cattatttga tgctttatct ttcaatgaat
    29101 ctactgtaga tacaaacgtg cttgcatctt ctttcgttgt gcttccgtta gaagttactt
    29161 gactcaacga gtctactgct gatacaaatt cgcttgcttc tgtacttaca gcttcgcttg
    29221 ttgatgttga tgctgatgta ctttctgatg ctgacacact cactgatgcg tgtgttgatt
    29281 tcactgctga cgcaaactct gatggtgtac cattatttga tgctttgtct ttcaacgaat
    29341 ctactgtgga tacaaacgtg cttgcatctt ctttcgttgt gcttccgtta gaagttactt
    29401 gactcaatga gtctactgct gatacaaact cgcttgcttc tgtacttaca gcttcgcttg
    29461 ttgatgttga tgctgatgta ctttctgatg ctgacatact cactgatgcg tgtgttgatt
    29521 tcactgctga cgcaaactct gatggtgtac cattatttga tgctttatct ttcaacgaat
    29581 ctactgtgga tacaaacgtg cttgcatctt ctttcgttgt gcttccgtta gaagttactt
    29641 gactcaacga gtctactgct gatacaaact cgcttgcttc tgtacttaca gcttcacttg
    29701 ttgatgttga tgctgatgta ctttctgatg ctgacacact cactgatgcg tgtgttgatt
    29761 tcactgctga cgcaaactct gatggtgtac cattatttga tgctttgtct ttcaatgaat
    29821 ctactgttga tacaaatgta ctcgcatctt ctttcgttgt gcttccatta gaagttactt
    29881 gactcaatga gtctactgct gatacaaact cgctcgcttc tgtacttaca gcttcacttg
    29941 ttgatgtcga cgctgacgta ctttctgatg ctgacacact cactgatgcg tgtgttgatt
    30001 tcactgctga cgcaaactct gatggtgtac cattatttga tgctttgtct ttcaatgaat
    30061 ctaccgttga tacaaacgtg cttgcatctt ctttcgttgt gcttccgtta gaagttactt
    30121 gactcaatga gtctactgct gatacaaact cgcttgcttc tgtacttaca gcttcacttg
    30181 tcgatgttga tgctgatgta ctttctgatg ctgacacact cactgatgcg tgtgttgatt
    30241 tcactgctga cgcaaactct gatggtgtac cattatttga tgctttgtct ttcaatgaat
    30301 ctaccgttga tacaaacgtg cttgcatctt ctttcgttgt gcttccgtta gaagttactt
    30361 gactcaacga gtctactgct gatacaaatt cgcttgcttc tgtacttaca gcttcgcttg
    30421 ttgatgttga tgcactcaca gactctgact cagaaatagt ttttgacaga ctcgtagatt
    30481 ttgaagtcga tgcactttgt gatttctcat gactcattga aagtgattgt gaatctgata
    30541 cagaagcaga gtcactcaat gatgcttcct caacttttga agttgatgta ctttgagaag
    30601 cttctgttga ttgatgagta gatgctgatt gactgttcaa gatacttgtt gatagagaat
    30661 cctttacaga cgtactttca gatgtactca ctgaagctga tgtgcttgct tcactttctg
    30721 attcacttaa tgaaacagat aatgagttcg aaatactatc agattttgcg atacttgttg
    30781 attctgattc actcgctgat tgactatatg caatagattc gctttccgaa attgacgtcg
    30841 agtcactgtc tgacaccgaa tgttgttcag atgtctcttg actaatagac actgagttac
    30901 tatcagagtc actttctgaa tgcgatattg attccgataa ggactgtgat gtcttatctg
    30961 atacacttaa agattgcgat acacttactg aaacttcaga ttgcattact gataatgaat
    31021 cgctcgttga ttgtgcttca ctcatttgta ccgaacgttt agacgatgtg taacctgaac
    31081 gatttgcgct aattgagatt gattcagatg tcgacgttga tgccgagtcg ctttctgact
    31141 tcactttaga cgttgatgtc gactcactca ctgatacacg cgttgattgt tctttactag
    31201 tcgatattga caacgattca tatgttgata tgcttgttga cttcgattca ctcgcaatga
    31261 ctttagattt cgagttagag atagatgtcg atgctgatgc acgcttcgaa gcatttgtac
    31321 ttgtattcac tgaagctttt tctgatgcat gtgttgattt caatgcactt gctgattgtg
    31381 attgatacac cgacagagat gctgatgcac tttctgaatc ttcaacactt gttgatgctg
    31441 aatcgcttaa tgactcattt tcttctaata attgacttgc tgaagcactt tctgaatgat
    31501 ttctcggttt tccatgagtt gcttcagata cgctgagtga cgttgaaata gattctgacg
    31561 tacttgctga tgctttacta cttgtgcttg ctgattggct taccgaagca ttagactcac
    31621 ttaatagctg tgattcagag gcttcagatt ttgcaacgct catagatgca ctacgcgatg
    31681 cttttgcact ctctacaaaa gactcttgca tagatgagat atttgattct tcgttactta
    31741 ctgatactga ctctgattga gactcagatt tgcttgttga agccgatgca ctcatttctt
    31801 gagatacttc aaccgatgct gtcgattcag attgagaatg actgttggca tgctcttcgc
    31861 ttgtcgaagt agacatacta cttgatgcct tagtactgat cgatgcggaa tcactcatag
    31921 aatacagcat agagtcttca tcactgattg acgtcgaaat cgatatagat gttgaatcac
    31981 tttctgactg atcaataagt gacatacttt gagatactga ctctgacaat gatcgacgca
    32041 tagaagcgct tgttgatttt gaatctcttg acactcgtga gttgctcgct gattcagata
    32101 ccgattgtga ttgactatct acttttgatt gagacgtaga tagcgattca gataccttag
    32161 cagcactttc tgatttcata gccgatactg acgcacttgt tgaaatgcgt tgtgattgtg
    32221 atgtttgctc tgattgtgat aattctgctg attgttgttg tgatagtgaa tgactatctg
    32281 attgtaatgt tgatgtgtgc tcagaaacgc taattgattc agagtctatt aacgcactat
    32341 ctgattctga taatgacgtt gacactgatg ccgaagcacg acttgaatct ccactactta
    32401 atgatgcaga agtgctttct gatacatgct tatcatgtaa cgcgcttgct gaaagtgatg
    32461 atgatttcga agttgacgcg gacgtactac tagaaacttc gccactaatt gatgcagaat
    32521 cacttaatga tgcattttca gaagcaaatt gacttactga tccggatgta tctctatcat
    32581 tagatgcact taaatcattt tcagaatgtg tgacagatgt cacttcgctt acagaagtac
    32641 ttgctgatgt actaagtgaa gctgagctac ttaacgacgc attagttgaa tttgagccac
    32701 ttgttgatgt agactcagac ttttcaatcg atgtggatgt tgaagcagat aaactacttg
    32761 attgactcgc actgattgaa agtgatgcaa catttactaa ttctgtcgat cccttcgctg
    32821 tactatcttt atccacactt gttgattggc tcaatgaaac cgacgtacta tctgataccg
    32881 atgtcgatgt tgacgcactg tctgaatcac tcgttgatgt acttgtcgac ttacttaatg
    32941 acgcggaatc actatctgat acagatgttg atgtcgatgc actgtctgaa tcacttgtcg
    33001 atgtacttgt tgatttactt aacgatgcgg acgtactgtc tgataccgac gttgatgtcg
    33061 atgcgctatc tgagtcactt gtcgatgtac ttgtcgactt gctcaatgat gctgacgcac
    33121 tatctgagtc acttgttgac atgcttgtcg acttgcttag tgatgcggag tcgctatctg
    33181 atactgatgt tgattttgat gcactatctg agtcgcttgt tgacgtactt gtcgacttac
    33241 ttaatgatgc ggacgtacta tctgagtcac ttgttgacgt gcttgtcgac ttgcttaatg
    33301 aagcggaatc gctatctgat actgatgttg attttgacgc actatctgaa tcgcttgttg
    33361 acgtacttgt cgacttgctt agtgatgctg atgtactatc tgaatcactt gtcgatgtac
    33421 ttgtcgactt gcttaatgat gctgaatcgc tatctgacac tgacgttgat tttgacgcac
    33481 tgtctgagtc acttgttgat gtactagtcg acttactcaa tgaagctgaa tcgctatctg
    33541 atactgatgt tgattttgat gcactatctg aatcacttgt cgatgtactt gtcgatttgc
    33601 ttaatgatgc tgaatcgcta tctgatactg atgttgatgt tgacacgcta tctgatactg
    33661 acgttgattt tgatgcacta tccgaatcac ttgttgatgt acttgtcgac ttgcttaatg
    33721 aaactgatgt gctgtctgat accgatgtcg atgttgacgc actatctgag tcgcttgttg
    33781 acgaacttgt cgacttgctt agtgatgctg atgtactgtc tgaatcgctt gttgatgtac
    33841 ttgtcgactt acttaatgac gcggaatcac tatctgatac tgatgttgat gttgatacgc
    33901 tatctgagtc acttgttgac gtacttgtcg acttgcttag tgatgctgat gtactgtctg
    33961 aatcactcgt tgatgtactt gtcgacttgc ttagtgatgc tgatgtacta tctgaatcgc
    34021 ttgttgatgt actagtcgac ttactcaatg aagctgaatc gctatctgat actgatgttg
    34081 attttgatgc actatctgaa tcacttgtcg atgtacttgt cgacttactc aatgaagtag
    34141 acgtgctgtc tgagtcactc gttgacgtac ttgccgactt gcttaatgat gcggagtcgc
    34201 tatctgatac tgatgttgat tttgatgcac tatctgagtc gcttgttgac gtacttgtcg
    34261 acttacttaa tgatgcggac gtactatctg agtcacttgt tgacgtgctt gtcgacttgc
    34321 ttaatgacgc ggaatcgcta tctgatacag atgttgatgt cgatgcgcta tctgaatcac
    34381 ttgttgacgt gcttgtcgac ttactcaatg aagctgaatc gctatctgac actgatgttg
    34441 atgtcgatgc gctatctgaa tcacttgtcg atgtacttgt tgatttactt aacgatgcgg
    34501 acgtactgtc tgataccgat gttgacgcac tatctgagtc acttgtcgat gtacttgttg
    34561 atttacttaa tgatgcggaa tcgctatctg acactgacgt tgattttgac gcgctgtctg
    34621 aatcgcttgt tgacgtactt gtcgacttgc ttagtgatgt tgacgtactg tctgataccg
    34681 acgttgattt tgatgcactg tctgaatcac ttgtcgatgt acttgtcgac ttgcttaatg
    34741 acgcggaatc actatctgat acagatgttg attttgacgc actatctgag tcgcttgttg
    34801 acgtacttgt tgacttactt agtgatgctg atgtactgtc tgaatcactc gttgatgtac
    34861 ttgtcgactt gcttaatgat gctgagtcac tatctgatac agatgttgat gtcgatgcgc
    34921 tatctgagtc acttgtcgat gtacttgtcg acttactcaa tgatgctgag tcgctatctg
    34981 atactgatgt tgatgtcgat gcgctatctg agtcactcgt tgacgtactt atcgatttac
    35041 tcaatgatgc tgaatcgcta tctgacactg atgttgatgt tgacacgcta tctgatactg
    35101 acgttgattt tgatgcacta tccgaatcac ttgttgatgt acttgtcgac ttgcttaatg
    35161 aaactgatgt gctgtctgat accgatgtcg atgttgacgc actatctgag tcgcttgttg
    35221 acgaacttgt cgacttgctt agtgatgctg atgtactgtc tgaatcgctt gttgatgtac
    35281 ttgtcgactt acttaatgaa gctgaatcgc tatctgacac tgatgttgat tttgatgcac
    35341 tgtctgaatc gcttgttgat gtacttgtcg acttgcttaa tgatgttgac gtactgtctg
    35401 agtcgcttgt tgacgtgctt gccgacttac ttaacgacgc ggatgtgcta tctgatgctg
    35461 acgttgacgt cgatgcactg tctgaatcac tcgttgatgt gcttgtcgat ttactcaatg
    35521 atgctgatgt actatctgaa tcacttgtcg atgtacttgt cgacttgctt aatgatgctg
    35581 aatcgctatc tgatactgat gttgattttg acgcactatc tgaatcactt gttgacgtgc
    35641 ttgtcgactt actcaacgat gctgagtcac tatctgatac tgacgttgat tttgacgcac
    35701 tatccgaatc acttgttgat gtacttgtcg atttacttag tgaagtagac gtactgtctg
    35761 aatcgcttgt cgatgtactt gttgacttac ttaatgatac ggacgtacta tctgataccg
    35821 acgttgattt tgatgcactg tctgaatcgc ttgttgatgt acttgtcgac ttgcttaatg
    35881 atgttgatgt gcttgtcgat ttactcaatg atgctgatgt actatctgaa tcgctcgttg
    35941 acgtacttgt cgacttactc aacgatgcgg agtcgctatc tgataccgac gttgattttg
    36001 acgcactatc tgaatcgctt gttgatgtac tagtcgactt actcaatgaa gctgaatcgc
    36061 tatctgatac tgatgttgat tttgatgcac tatctgaatc acttgtcgat gtacttgtcg
    36121 acttactcaa tgaagtagac gtgctgtctg agtcactcgt tgacgtactt gccgacttgc
    36181 ttaatgatgc tgacgtgctg tctgagtcac tcgttgacgt acttgccgac ttgcttagtg
    36241 atgctgacgt gctatctgat accgacgttg attttgatgc actatctgaa tcacttgttg
    36301 acgtgcttgt cgatttactc aatgatgcgg acgtactgtc tgatactgac gttgattttg
    36361 acgcactatc tgaatcactt gtcgatgtac ttgtcgactt actcaatgaa gtagacgtgc
    36421 tgtctgaatc acttgttgac gtgcttgtcg atttactcaa cgatgcggag tcgctatctg
    36481 atactgatgt tgatgtcgat gcgctatctg agtcgctcgt tgatgtactt gttgacttgc
    36541 tcaatgatgc tgacgcgctg tctgaatcgc ttgttgatgt actagtcgac ttactcaatg
    36601 aagctgaatc gctatctgat acagatgttg atgttgacgc gctatctgag tcacttgttg
    36661 acgtacttgt tgatttactc aatgatgccg actcacttgc tgccactgat tgacttcttg
    36721 aaatcgattg cgatttcgcc acacttgctg aacgacttaa tgacgtcgat ttctctgcac
    36781 tcactgagtt actgagcgat gtgctcttcg acttacttaa cgatgccgac tcactcgctg
    36841 ccaccgattg gcttcttgaa atcgattgcg attttgctac acttgctgaa cgacttaatg
    36901 acgtcgattt ctctgcactc actgagttgc ttaacgatgt gctcttcgac ttacttaacg
    36961 atgccgactc actcgctgct actgattggc ttcttgaaat cgattgcgat tttgctacac
    37021 ttgctgaacg acttaatgac gtcgatttct ctgcactcac tgagttgctt aacgatgtgc
    37081 tcttcgactt acttaacgat gccgattcgc tcgctgccac cgattggctt cttgaaatcg
    37141 attgcgattt tgccacactt gctgaacgac ttaatgacgt cgatttctct gcactcactg
    37201 agttactgag cgatgtgctc ttcgacttac ttaacgatgc cgactcactt gctgccactg
    37261 attgacttct tgaaatcgat tgcgattttg ctacacttgc cgaacgactc aatgacgtcg
    37321 atttctctgc actcactgag ttgcttaacg atgtgctctt cgacttactt aacgatgccg
    37381 actcactcgc tgccaccgac tggcttcttg aaatcgattg cgatttcgcc acactagctg
    37441 attggctctg cgcaattgac tttttaactg ataatgactt tgactttctt accgaaatag
    37501 catgtgacct tttcgccgaa ttagattttc ttaccgaaag tgaatgtgac tttcttactg
    37561 aagccgcttt tgacttttta atccagttag accttttcac cgaaagcgag tgtgattttg
    37621 ctgcactttc agaattactc atcgatattg actgcttttt agacaatgat attgatagac
    37681 tctctgattc actcgctgct acagattggc tattcgcaat cgactgactt cttgaaatcg
    37741 actgtgattc cgctacactt gctgatcggc tatgtgcaat cgactgactt cttgaaatcg
    37801 actgtgattt tgccacactt gctgatcgac tctgcgcaat tgactgactt cttgaaatcg
    37861 actgtgattt tgccacactt gctgatcgac tctgcgcaat tgactgactt cttgaaatcg
    37921 actgtgattt tgccacactt gctgatcgac tgtgtgcgat cgactgcctt cttgaaatcg
    37981 actgtgattt tgctacactt gctgatcgac tgtgtgcgat cgactgcctt cttgaaatcg
    38041 actgtgattt tgctacactt gctgatcggc tgtgtgcaat cgactgactt cttgagatcg
    38101 attgtgattt tgctacactt gctgatcggc tgtgtgcgat cgactgactt cttgagatcg
    38161 attgtgattt cgccacagat tgacttctcg agatggattg cgattttgct acacttgccg
    38221 aatgacttgc ggctacaata gattcactct cagatatgga ctgtgatctt ctaatagact
    38281 ccgattgtac gagcgatgtg gatctcgatt cactcgcctt cacctcagaa atagagttcg
    38341 aaactgaggc tctaccttca ttagtttgaa tatatttgta atatgggtca tagtctcgaa
    38401 tccatacatt ttcaaagtag tctgtcatac cgccgacacc atcttgttga cctacagggt
    38461 gaaattccca attaaatctt cctgttgggt taacaattgg aactgtaatt tcagcagtta
    38521 caccataacc tgcttcccca tgttttggtg acaatacagc aggttgccaa taataaccat
    38581 tattatgatc tccagaaacc ggcttgacat tagagccaac agcccagccg ccataatttt
    38641 ctattgttac cccttgtcta actgttggtt taccgaatgc cgatcctaat ttaagttgac
    38701 cacgaccagg acctgcgtcc cagccatttt taataccata tcgtttctgt cctgcccacc
    38761 taggtttttc aacattagac gtgtttggat catcttgact caatgtatag cggatcttca
    38821 tttctttgcc attacttgta acgacaactt tgtagaaaat attatattta attctacctc
    38881 tacctctgaa gcttccttgc cctgtgtaga cttttgtcgt tggtgttgtt cttgatcttg
    38941 gtacatagta agccgctcta aatcctgtat aacctgagct caaatctgct gaacgcatcg
    39001 tatgttcttc atgaagtttg atgttttgat tttgagataa cttcgaaagg ttttttgaca
    39061 attccccttc tttagtttcc ttcaatgatg tatttgaagt cgacgtttgg ctctcaatag
    39121 ataggctcgt aagactttgt gcagtgtgtg gtgttgattg ctcgtggttg gaagagccat
    39181 ttacctcttg acttgttgac tgatgattat ctgattgact atcttgagtt ttagtatgag
    39241 aatcttttga tgttgattct gattcctcta ctgaagttga tattgatttg gaagttgacg
    39301 ttgaaagact tgttgactct gatgtttgat gctcagataa tgagatactt tcagaatcgt
    39361 gtttactttc actttctgtt attgggttcg ttgattgatc tgacgatgta gacttttcaa
    39421 taacaattga tgtttgatcg ccaatcgttt gacttttggt tgccagttca gaagttatag
    39481 gtgcatccga cgccgcaaat gcttgttggt catgcaacat attaactgtg aacattccac
    39541 ccgcaaaagc agttgttctt aatgcatttt tcttcaactg ttccccaaat tgtgtcgtta
    39601 cttctccatt ttcatccttt acaatgtcat ggcttaaaaa agataagcct aatgctttta
    39661 ataactgaaa ttctttaatt ccagctttaa cccagttttt acctgacttg taaagtttca
    39721 ctcttgcttt ttcttcactt aaacttttct taaattctct aaattttctt gtcattgcaa
    39781 aactcccata tgataaattt caaaagataa aaattccacc actgcattaa tagataataa
    39841 tacgattcta agcgttaggc aac
//
LOCUS       DANHPA010000008        38224 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.008, whole genome shotgun sequence.
ACCESSION   DANHPA010000008 DANHPA010000000
VERSION     DANHPA010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 38224)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38224)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38224
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.008"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(207..1166)
                     /locus_tag="PTC28_000351"
     CDS             complement(207..1166)
                     /locus_tag="PTC28_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HDK5715670.1"
                     /translation="MKRIMITGALGQIGTELVARCREIYGNENVLATDIREPEANSIV
                     AAGPFEILDVTDADKMVQLVESFKPDTLMHMAALLSATCEQNPLLAWNLNMGGLVNAL
                     EAAREYNLQFFTPSSIGAFGPDTPKKNTAQVTIQRPNTMYGVNKVSGELLCDYYFTKF
                     GVDTRSVRFPGLISYVKEPGGGTTDYAVDIYFQAVREGKYTSYIQKDTYMDMMFMDDA
                     IDAIIQLMEADGGKLIHRNAYNLSAMSLEPEMIKEAIQAHIPDFKLTYDVDPVRQDIA
                     ESWPDSIDTSCARGEWGFNPQYDLEKMTVRMLEGIREKESHKA"
     gene            complement(1374..2564)
                     /locus_tag="PTC28_000352"
     CDS             complement(1374..2564)
                     /locus_tag="PTC28_000352"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002479459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HDK5715671.1"
                     /translation="MVQQLNDFLDENLNHLKENGLYNEIDTVEGANGPEIQINGKKYI
                     NLSSNNYLGLATNEDLKTAAKNAIDSHGVGAGAVRSINGTLDLHDELESTLAEFKGTE
                     AAVAYQSGFNCNMAAISAVMNKNDAILSDELNHASIIDGCRLSKAKIIRVNHSDMDDL
                     RQKAKEAVESGQYNKVMYITDGVFSMDGDVAKLPEIVEICEQYGIMVYVDDAHGSGVM
                     GRGAGTVKHFGLQDKVDFQIGTLSKAIGVVGGYVAGSQKLIDWLKAQSRPFLFSTSLA
                     PGDTKAITEAVKKLMASTELHDRLWENANYLKEGLSRLGFDTGQSETPITPVIIGDEK
                     KTQQFSKRLMEEGIYVKSIVFPTVPRGTGRVRNMPTAAHTTDMLDQALEVYARVGKEL
                     GIIE"
     gene            2674..3861
                     /locus_tag="PTC28_000353"
     CDS             2674..3861
                     /locus_tag="PTC28_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDK5715672.1"
                     /translation="MTDWFQLAYDKEQEMVQTRRYLHQNPELSFQETKTHAYILQRLQ
                     QLNFEIDEKVGRNGIIARITGDESGSTIALRADFDALPIEDLKEVPYRSQVPGVMHAC
                     GHDGHTTILLTVAELLHAHQTQLKGTVVLIFQYGEEVMPGGAQEMIADNALMGVDKIY
                     GNHLWSGYPTGTIHTRPGPMMAQPDEFNITIHGKGGHGAKPHETIDPIVILAEFILSA
                     QKIVSRTLDPVKQAVISFGKIEAGEADNVIPDTATCRGTVRTFETDVQAHIYHKMDLL
                     LQGLALANDITYTFDYIKGYLPVYNHEASAEIVKNAAHALNFRYQESDLMMVGEDFSF
                     YLKARPGAFFLTGCGSAQKGTDWPHHSPHFDIDEDAMKYAVSTFMKILELEGIFKDEL
                     KRT"
     gene            4447..5151
                     /gene="budA"
                     /locus_tag="PTC28_000354"
     CDS             4447..5151
                     /gene="budA"
                     /locus_tag="PTC28_000354"
                     /EC_number="4.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017636624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate decarboxylase"
                     /protein_id="HDK5715673.1"
                     /translation="MGDILYQHGTLGTLMAGLLEGTATIQDILKQGDAGLGTLAGSDG
                     EVIFIDGQAFHANAQNEFTQLTGEELTPFATITRFRAHHTFKTTNQSAQHALSQVRTK
                     MRSQNAFSAVKITGTFQHMHVRMMPGQTPPYRRLIESAQQQPEYTRSNISGTLIGFYT
                     PELFHGIGAGGFHIHFADDARTFGGHVLDFHIEAANVEIQDFETLTQHFPVNYRSFTE
                     AEIDYEDINEEIREVE"
     gene            complement(5264..6451)
                     /gene="tuf"
                     /locus_tag="PTC28_000355"
     CDS             complement(5264..6451)
                     /gene="tuf"
                     /locus_tag="PTC28_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDK5715674.1"
                     /translation="MAKEKFDRSKEHANIGTIGHVDHGKTTLTAAIATVLAKHGDSVA
                     QSYDMIDNAPEEKERGITINTSHIEYQTDKRHYAHVDCPGHADYVKNMITGAAQMDGG
                     ILVVSAADGPMPQTREHILLSRNVGVPALVVFLNKVDMVDDEELLELVEMEVRDLLSE
                     YDFPGDDVPVIAGSALKALEGDAQYEEKILELMEAVDTYIPTPDRDSDKPFMMPVEDV
                     FSITGRGTVATGRVERGQIKVGDEVEIIGLTEESSKTTVTGVEMFRKLLDYAEAGDNI
                     GALLRGVAREDINRGQVLAAPGSITPHTKFKAEVYVLSKDEGGRHTPFFSNYRPQFYF
                     RTTDVTGVVNLPEGTEMVMPGDNVEMEVELISPIAIEDGTRFSIREGGRTVGSGVVTN
                     IEQ"
     gene            complement(6633..8714)
                     /gene="fusA"
                     /locus_tag="PTC28_000356"
     CDS             complement(6633..8714)
                     /gene="fusA"
                     /locus_tag="PTC28_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HDK5715675.1"
                     /translation="MGRDFSLKNTRNIGIMAHIDAGKTTTTERILYYTGRIHKIGETH
                     EGASQMDWMEQEQDRGITITSAATTAEWKNHRVNIIDTPGHVDFTVEVERSLRVLDGA
                     VTVLDAQSGVEPQTETVWRQATTYGVPRIVFVNKMDKIGANFDYAVSTLHDRLQANAA
                     PIQLPIGAEDEFSAIIDLVTMKCFKYTNDLGTEIEETEIPEDYRERAEEAREALIEAV
                     AETNESLMEKIFEEQEITVDELKDAIRQATTDVEFYPVLCGTAFKNKGVQLMLDAVID
                     YLPSPLDVKPIVGHRADDPDEEVIAKADDDAEFAALAFKVMTDPYVGKLTFFRVYSGT
                     LTSGSYVKNSTKGKRERVGRILQMHANSREEISTVYSGDIAAAVGLKDTGTGDTLCGE
                     KNDIILESMEFPEPVIHLSVEPKSKADQDKMTQALVKLQEEDPTFKAHTDEETGQVII
                     GGMGELHLDIIVDRMKKEFNVEANVGAPMVSYRETFKSSAAVQGKFSRQSGGRGQYGD
                     VHIEFTPNETGAGFEFENAIVGGVVPREYIPSVEQGLKDAMENGVLAGYPLIDVKAKL
                     FDGSYHDVDSSEMAFKIAASLALKEAAKKCDPVILEPMMKVTIEMPEEYMGDIMGDVT
                     ARRGRVDGMEPRGNAQVVNAYVPLSEMFGYATSLRSNTQGRGTYTMYFDHYAEVPKSI
                     SEEIIKKNKGE"
     gene            complement(8857..9327)
                     /gene="rpsG"
                     /locus_tag="PTC28_000357"
     CDS             complement(8857..9327)
                     /gene="rpsG"
                     /locus_tag="PTC28_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013054923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HDK5715676.1"
                     /translation="MPRKGSVPKRDVLPDPIHNSKLVTKLINKIMLDGKRGTAQRILY
                     SAFDLVQERSGRDAMEVFDEAINNIMPVLEVKARRVGGSNYQVPVEVRPERRTTLGLR
                     WLVNYARLRGEKTMEERLANEILDAANNTGGAVKKREDTHKMAEANKAFAHYRW"
     gene            complement(9408..9821)
                     /gene="rpsL"
                     /locus_tag="PTC28_000358"
     CDS             complement(9408..9821)
                     /gene="rpsL"
                     /locus_tag="PTC28_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015912363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HDK5715677.1"
                     /translation="MPTINQLVRKPRQSKTKKSDSPALNRGFNSQKKQFTKLNSPQKR
                     GVCTRVGTMTPKKPNSALRKYARVRLSNNIEINAYIPGIGHNLQEHSVVLVRGGRVKD
                     LPGVRYHIVRGALDTSGVDGRMQSRSLYGTKKPKK"
     gene            complement(9917..10171)
                     /locus_tag="PTC28_000359"
     CDS             complement(9917..10171)
                     /locus_tag="PTC28_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal L7Ae/L30e/S12e/Gadd45 family protein"
                     /protein_id="HDK5715678.1"
                     /translation="MSNEKVTRFDKQAYVVGLKETLKALRNQRVNKLIIGEDVNVHLL
                     ARVLSFANQNMIPIEFFSSRQALGEYVGINVKATVVALLK"
     gene            complement(10349..13969)
                     /gene="rpoC"
                     /locus_tag="PTC28_000360"
     CDS             complement(10349..13969)
                     /gene="rpoC"
                     /locus_tag="PTC28_000360"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HDK5715679.1"
                     /translation="MIDVNKFHYMKIGLASPEKIRSWSYGEVKKPETINYRTLKPEKD
                     GLFCERIFGPTKDWECSCGKYKRVRYKGMICDRCGVEVTKSKVRRERMGHIELAAPVS
                     HIWYFKGIPSRMGLLLDMSPRALEEVIYFASYVVVDPGPTGLEKKTLLSEAEFRDYYD
                     KFPGQFTAKMGAEGIKDLLEEINLDEELKMLRDELESATGQRLTRAIKRLEVVESFRN
                     SGNNPAWMILDVLPIIPPEIRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGA
                     PGIIVQNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGK
                     RVDYSGRSVIAVGPNLKMYQCGLPKEMALELFKPFVMKELVQREIATNIKNAKSKIER
                     TEDEVWDVLEDVIIEHPVLLNRAPTLHRLGIQAFEPTLVEGRAIRLHPLVTTAYNADF
                     DGDQMAVHVPLSKEAQAEARMLMLAAQNILNPKDGKPVVTPSQDMVLGNYYLTLERKD
                     AVNTGMMFNDTNEVIKAYANGHVHLHTRIGVQASSFNNPTFTEEQNRKILTTSVGKVI
                     FNEIIPDSFAYINEPTATNLEKSTPDKYFVDASELGEGGLAEYFENTELVPPFNKKFL
                     GNIIAEVFNRFSITDTSMMLDLMKDLGFKYSSKAGITVGVADIVVLPDKQEILDESEK
                     LVERVQKQFNRGLLTEEERYNAVIEIWTNAKDRIQAKLMKSLDKTNPIFMMSDSGARG
                     NASNFTQLAGMRGLMAAPSGKIIELPITSSFREGLTVLEYFISTHGARKGLADTALKT
                     ADSGYLTRRLVDVAQDVIVREEDCGTDRGLLVSDIKEGTEMIEPFIERIEGRYSKETV
                     RHPETDEIIIRPDELITPEIAKEITDAGIEEMYIRSAFTCNTRHGVCEKCYGKNLATG
                     EKVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRIQEIFEARNPKGQ
                     AVITEIEGVIDNITVGKDRQQEIVVKGANETRSYLASGTSRLKVEIGQSVARGEVLTE
                     GSIEPKNFLSIAGLTATEEYLLKEVQKVYRMQGVEIDDKHVEVMVRQMLRKVRIIEAG
                     DTKLLPGSLVDIHNFTDANREAFKERKRPATAKPVLLGITKASLETESFLSAASFQET
                     TRVLTDAAIKGKRDDLLGLKENVIIGKLIPAGTGMKRYSKVDIEKDEVTQPGLENQVT
                     VE"
     gene            complement(14204..17758)
                     /gene="rpoB"
                     /locus_tag="PTC28_000361"
     CDS             complement(14204..17758)
                     /gene="rpoB"
                     /locus_tag="PTC28_000361"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HDK5715680.1"
                     /translation="MAGQFVQYGRHRKRRNYARISEVLELPNLIEIQTKSYDWFLKEG
                     LLEMFRDISPIEDFTGNLSLEFVDYRLGEPKYDLEESKNRDATYAAPLRVKVRLIIKE
                     TGEVKDQEVFMGDFPLMTETGTFVINGAERVIVSQLVRSPSVYFNEKLDKNGRVNYDA
                     TVIPNRGAWLEYETDAKDVVYVRIDRTRKLPLTVLLRALGYSTDQEIIELIGDNEYLR
                     NTLEKDSTENTEQALLEIYERLRPGEPPTVENAKSLLYSRFFDPKRYDLASVGRYKAN
                     KKLHLKHRLFNQKLAEPIVNTETGEIVAEEGTVLDRRKLDEIMDVLETNANAQVYELP
                     NSIIDEPVEIQSIKVYVPNDDEERTTTVIGNAFPDSEVKCITPADIVASMSYFFNLLH
                     GIGYTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTDSITPQQLINI
                     RPVIASIKEFFGSSQLSQFMDQANPLAELTNKRRLSALGPGGLTRERAQMEVRDVHYS
                     HYGRMCPIETPEGPNIGLINSLSSYARVNEFGFIETPYRKVDIETNTITDQIDYLTAD
                     EEDSYVVAQANSRLDENGRFIDDEIVCRFRGNNTTMAKEKMDYMDVSPKQVVSAATAC
                     IPFLENDDSNRALMGANMQRQAVPLLNPESPFVGTGMEHVAARDSGAAVISKYRGRVE
                     HVQSSEILVRRLVEENGQEVDGTLDRYPLAKFKRSNSGTCYNQRPIIAKGDIVEKGEI
                     LADGPSMELGEMALGRNVVVGFMTWDGYNYEDAVIMSERLVKDDVYTSIHIEEYESEA
                     RDTKLGPEEITRDIPNVSENALKNLDDRGIVYVGAEVKDGDILVGKVTPKGVTELTAE
                     ERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKVFNREEGDDSLSPGVNQLVRVYIV
                     QKRKIHVGDKMCGRHGNKGVISKIVPEEDMPYLPDGRPIDIMLNPLGVPSRMNIGQVL
                     ELHLGMAAKNLGIHVASPVFDGANDDDVWSTIEEAGMARDGKTVLYDGRTGEPFDNRI
                     SVGVMYMLKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGA
                     AYTLQEILTYKSDDTVGRVKTYEAIVKGENISRPSVPESFRVLMKELQSLGLDVKVMD
                     EQDNEIEMRDLDDDDIPDRKVNMQPSSVPESQKEFNEQ"
     gene            complement(17971..18579)
                     /locus_tag="PTC28_000362"
     CDS             complement(17971..18579)
                     /locus_tag="PTC28_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDK5715681.1"
                     /translation="MSHYYDAHPDAATDEKEITYAYQQHQLHLTTDAGVFSRDQVDFG
                     SDLLVHTFLNAHPPGQKKTIVDVGCGYGPIGLMLAKVAPNDHITMLDVNHRALGLAEK
                     NAQRNQLSNVTIQESDGLSQVANETQHYVVTNPPIRAGKQVVHQIFVDAHRVLEANGE
                     LYVVIQKKQGMPSAKKKMEVVFGNVESIKNSKGYHILKSVKS"
     gene            complement(18657..19022)
                     /gene="rplL"
                     /locus_tag="PTC28_000363"
     CDS             complement(18657..19022)
                     /gene="rplL"
                     /locus_tag="PTC28_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001273587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HDK5715682.1"
                     /translation="MANQEQIIEAIKEMSVLELNDLVKAIEEEFGVTAAAPVAVAGAA
                     GGDAAAEKTEFDVELTSAGSSKIKVVKAVKEATGLGLKDAKELVDGAPSIIKEAMPKE
                     EAEKLKAQLEEVGASVELK"
     gene            complement(19063..19563)
                     /locus_tag="PTC28_000364"
     CDS             complement(19063..19563)
                     /locus_tag="PTC28_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HDK5715683.1"
                     /translation="MSGIIEAKKQQVDVIADQLKGSVSTVVVDYRGLTVAEVTELRKQ
                     LREANVQYKVYKNTMLRRAAEKAGIEGLDEFLTGPTAVAFTTEDVVAPAKVIAGFAKE
                     HEALEIKSGIMEGSVITADEVKTVGSLPSHEGLVSMLLSVLQAPMRNFAYAVKAVGES
                     KEENAE"
     misc_feature    complement(19613..19753)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00557"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L10 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00557"
     gene            complement(19851..20546)
                     /gene="rplA"
                     /locus_tag="PTC28_000365"
     CDS             complement(19851..20546)
                     /gene="rplA"
                     /locus_tag="PTC28_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019468572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HDK5715684.1"
                     /translation="MAKKGKKYQEALNKVDRQALYTVEEAIRLAQETSIANFDASVEV
                     AFRLGIDTRKNDQQIRGAVVLPHGTGKSQRVLVFAKGDKIAEAEAAGADYVGDAEYVN
                     KIQQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGK
                     VEYRAEKAGIVHASIGKVSFETEKLVENFKTLQDVLTKAKPSSAKGTYFKSVAVTTTM
                     GPGIKVDTATFKL"
     gene            complement(20738..21160)
                     /gene="rplK"
                     /locus_tag="PTC28_000366"
     CDS             complement(20738..21160)
                     /gene="rplK"
                     /locus_tag="PTC28_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012664221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HDK5715685.1"
                     /translation="MAKKVEKVVKLQIPAGKANPAPPVGPALGQAGVNIMAFTKEFNA
                     RTQEQVGLIIPVEIYVYEDRSFTFITKTPPAAVLLKKAAGIEKGSGEPNKNKVATVTK
                     DQVREIANTKMPDLNAADEEAAMRIVEGTARSMGIVVE"
     gene            complement(21325..21873)
                     /gene="nusG"
                     /locus_tag="PTC28_000367"
     CDS             complement(21325..21873)
                     /gene="nusG"
                     /locus_tag="PTC28_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001832303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HDK5715686.1"
                     /translation="MSEELGAKRWYAVHTYSGYENKVKKNLEKRVESMNMTEQIFRVV
                     IPEEEETQVKDGKAKKQMKKTFPGYVLVELVMTDESWYVVRNTPGVTGFVGSAGAGSK
                     PNPLLPDEVRFILKQMGMNEKSIDVEVELGEQVRITSGPFASQVGEIHEIEADKFKLT
                     VLVDMFGRETPVEVEFDQIEKL"
     gene            complement(21892..22071)
                     /gene="secE"
                     /locus_tag="PTC28_000368"
     CDS             complement(21892..22071)
                     /gene="secE"
                     /locus_tag="PTC28_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002509413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HDK5715687.1"
                     /translation="MPKKESFFQGVKSEMEKTSWPTGPELVKYTTIVVMTVLFFLLFF
                     WGLDIGIGQLIEMIK"
     gene            complement(22089..22232)
                     /gene="rpmG"
                     /locus_tag="PTC28_000369"
     CDS             complement(22089..22232)
                     /gene="rpmG"
                     /locus_tag="PTC28_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002451211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDK5715688.1"
                     /translation="MKKVPLNCEKCGNRNYHVPKSPNVTERLILKKFCVKCNTHTLHK
                     ESK"
     gene            complement(22304..22876)
                     /locus_tag="PTC28_000370"
     CDS             complement(22304..22876)
                     /locus_tag="PTC28_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDK5715689.1"
                     /translation="MAQIPNPNDIVSETIQRAQQQQPEAIEKLVHHIERIARKSFGDF
                     SVAQADCDDLVQDVVLAIYQKIQSEQFYFGVPFEHYIKRTIYRRKLDYRRKKLTHQRI
                     FEDYVDGYAISYRTQLAEQQRHSHEYLHYIQDTLQQSLQQLSAFEMRVLDYLIAEWRP
                     AEIARELNVSDKKVYNALYRIRQKLKSLLT"
     gene            complement(22953..23477)
                     /locus_tag="PTC28_000371"
     CDS             complement(22953..23477)
                     /locus_tag="PTC28_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002433453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HDK5715690.1"
                     /translation="MKDYYVIIDGYNMIGQSQKLTRVAKESLEEAREQLLIEISNYSA
                     VTKGKIVCVFDAYDRGTPQSEYEYHGVHVVFTKEHETADSFIERYVYNIYNKHTTHIT
                     VVTSDMSEQHAIFGTGAYRLSSREMWRHLKENKESVTKSMDEFGEMKPRTRIQLSEEL
                     LSEFEKIRRGKSRD"
     gene            complement(23481..24230)
                     /gene="rlmB"
                     /locus_tag="PTC28_000372"
     CDS             complement(23481..24230)
                     /gene="rlmB"
                     /locus_tag="PTC28_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HDK5715691.1"
                     /translation="MDSEIIVGRHAVREAVISGHTINKILIQEGIKKQQIEEILKAAK
                     SSKLVVQTVPKSKLDQLANAPHQGVAAFVAPYEYADLNQFLAEQAQKEGLSTVLILDG
                     LEDPHNLGSILRTADATGVDGIIIPKRRSVSLTQTVAKASTGAIQHVPVIRVTNLSQT
                     MDVLKDKGYWIAGAEASNATDYRQMQADMPLAIVIGSEGQGMSRRVKEKCDFYIKIPM
                     VGHVNSLNASVAASLMMYEVFRKRQPIGGDK"
     gene            complement(24236..24637)
                     /locus_tag="PTC28_000373"
     CDS             complement(24236..24637)
                     /locus_tag="PTC28_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mini-ribonuclease 3"
                     /protein_id="HDK5715692.1"
                     /translation="MDKPTNAKLLNPLSLAYVGDAVLDQYVRTYIILKLQSKPNRLHQ
                     EAKRFVSAKSQAVTLEHLIAQDWFNEEELAVVKRGRNAKSYTKAKNTDVQTYRKSSGL
                     EAIIGFLYLEHQEERLEALLKVIVENVEERR"
     gene            complement(24630..26030)
                     /locus_tag="PTC28_000374"
     CDS             complement(24630..26030)
                     /locus_tag="PTC28_000374"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000631968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HDK5715693.1"
                     /translation="MITLYNTLTRQKEVFQPIEPGKVKMYVCGPTVYNYIHIGNARPA
                     INYDVVRRYFEYKGYEVNYVSNFTDVDDKLIKRSQELGETVPEIAERYIQAFYEDTEA
                     LNVKKATSNPRVMDHMDDIIKFIKKLVDEGYAYESGGDVYFRTRQFEDYGKLSHQSID
                     DLKVGARIEQGENKEDALDFTLWKKAKPGEISWESPFGEGRPGWHIECSVMAFEKLGP
                     TIDIHAGGSDLQFPHHENEIAQSEAHNHETFANYWMHNGFINIDNEKMSKSLGNFILV
                     HDIIKEVDPDVLRFFMISVHYRSPINYNLELVEAARSGLERIRNSYQALTERETVATD
                     LTNDATMLTQIDAILTQFETVMDDDFNTANAITAWYDLVKLANKYLLEDNTSTQVIQR
                     FKEVFAIFSDVLGVPLTSNHVEGLLDEEIERLIEERNAARQAKDYARADEIRDQLKAQ
                     NIILEDTPQGVRYKRG"
     gene            complement(26014..26679)
                     /gene="cysE"
                     /locus_tag="PTC28_000375"
     CDS             complement(26014..26679)
                     /gene="cysE"
                     /locus_tag="PTC28_000375"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HDK5715694.1"
                     /translation="MLFEGGVKVFRRMMDDVKMVFEQDPAARSTIEVITTYAGLHAVW
                     SHLIAHRLYQKKRYVLARAISQASRFFTGIEIHPGAKIGRRLFIDHGMGVVIGETCTI
                     GDNVTIYQGVTLGGTGKEKGKRHPDIGDNVLIAAGSKVLGNIKVHSNVNIGANSVVLQ
                     DVPSYSTVVGIPGRIVKQDGRRIGKTFDHLNLPDPIYEQLKQLERQLEQTKNGEIKDD
                     YII"
     gene            complement(27067..28521)
                     /locus_tag="PTC28_000376"
     CDS             complement(27067..28521)
                     /locus_tag="PTC28_000376"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000415154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDK5715695.1"
                     /translation="MSNRVRVRYAPSPTGYLHIGNARTALFNYLFAKHYDGDFVIRIE
                     DTDSKRNLADGESSQFDNLKWLGLDWDESVDKDKGYGPYRQSERGEIYQPLVEQLLAE
                     DKAYKCYMTEEELEAERQEQIARGEMPRYGGKHAHLTEEERQQFEAEGRKPAIRFRVP
                     QNKTYTFDDMVKGPVTFESDNFGDWVIVKKDGVPTYNFAVAVDDHYMEISDVIRGDDH
                     ISNTPKQLMIYETFGWEPPRFAHMTLIVNEQRKKLSKRDGQILQFIEQYRDLGYLPEA
                     LFNFIALLGWSPEGEEEIFSKDEFIKIFTEKRLSKSPAFFDKQKLEWINNQYMKEKDA
                     ETVFEMTLPHMIKAGLLPESPSEAELDWGRKLVALYQEQMSYAGEIVPLSELFFRDEK
                     ELDEASQEVLNGEQVPQLMTALYGKLEALENFEAAEIKKIIKEVQKETGIKGKQLFMP
                     IRVAVTGQMHGPELPNTMEVLGQDKVLRRIQSLL"
     gene            complement(28598..29077)
                     /locus_tag="PTC28_000377"
     CDS             complement(28598..29077)
                     /locus_tag="PTC28_000377"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HDK5715696.1"
                     /translation="MFRVGLGYDVHAFDATRPLIIGGIEVPHTHGLKGHSDADVLLHA
                     ITDAMLGACALGDIGKLFPDTDPQFKDADSKKLLTEAYAEVQKEGYVINNIDATIIAE
                     KPKFRPYIDEMRAIIAGLFAVDIKRVNVKATTSEKLGFTGRQEGIAAQAIVSLTATT"
     gene            complement(29070..29768)
                     /gene="ispD"
                     /locus_tag="PTC28_000378"
     CDS             complement(29070..29768)
                     /gene="ispD"
                     /locus_tag="PTC28_000378"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HDK5715697.1"
                     /translation="MSNYHVIIPAAGKGSRMGRPYNKLFIEVAGRRVLEHTLSVFQSD
                     VQCEGIHLAIHERDRDQLEVLTGPFSKVKSLVVGGETRQDSIHQVLQNVEFTNDDIVL
                     VHDGARPFVTHDTIHEVTAAIRTYGAAIVGVKAKDTIKRVSDQFVTETLDRATLWQVQ
                     TPQGATFELLASAYDHAKTQQMMGTDDASLIEAYGQRIYMVEGDYDNIKLTTEEDLTY
                     AEAILEKRSRHHHV"
     gene            complement(29769..30830)
                     /locus_tag="PTC28_000379"
     CDS             complement(29769..30830)
                     /locus_tag="PTC28_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN/TRAM domain-containing protein"
                     /protein_id="HDK5715698.1"
                     /translation="MDFIKLLVIVSYIIIGSVLGILLIPAVMIDFNVSHPPMMENSYV
                     TSIMGVAIMFLLFGWFIPRIAYAMKDLEQFVLGYSAIEIIFATIGLFMGLLISVMISF
                     ILEFIGTDLINRIVPILLTLSLSYLGFQFGLKKRDEMLLFLPENMARSMAINARNAVP
                     KIIDTSAIIDGRILKIMEAGFIDGEILIPQGVINELQVVADANDSIKRDKGRRGLEIL
                     SAIHLSKHPTRIIHPQRTHQDIDDLIVRLAQHYRAHVITTDYNLNKVCSIQGIKVLNV
                     NDLSDAIRPEVHQGDRFDLMITKVGKEPGQGVGYLDDGTMVVVDDAKQYVNETITLEV
                     ISMLQTASGRIIFAKKVEA"
     gene            complement(30849..32219)
                     /gene="radA"
                     /locus_tag="PTC28_000380"
     CDS             complement(30849..32219)
                     /gene="radA"
                     /locus_tag="PTC28_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499080.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HDK5715699.1"
                     /translation="MAKTKTIFECTACGYQSPKWMGKCPNCGAWNSMEESFEQKTASP
                     KHGVRAQKTSSAKIQKLDDIKQELAPRIQTNSGELNRVLGGGIVEGSLVLIGGDPGIG
                     KSTLLLQMCAALSKEKRVLYITGEESLNQTKIRADRLDEDASQLNVFAETDLMVIHEA
                     VKKVEPDLIVVDSIQTIYHPEISSAPGSVSQVRESTQSLMHIAKQMNVATFIVGHVTK
                     EGQIAGPRLLEHMVDTVLYFEGDEHHAYRILRAVKNRFGSTNEMGIFEMKQSGLKSVL
                     NPSEMFLEERTTNVAGSTIVATMEGTRPLLIEVQALVTPTTFNNPRRMATGIDHNRLS
                     LLMAVLEKKEGYLLQQQDAYIKVAGGVKLSEPAVDLGIVIATASSFKDQAVDGLDCYI
                     GEVGLTGEVRRVSRIEQRVQEAAKLGFKRVIIPKNNIGGWHFPEGIEVIGVTSVNEAL
                     KYALKN"
     gene            complement(32618..33364)
                     /locus_tag="PTC28_000381"
     CDS             complement(32618..33364)
                     /locus_tag="PTC28_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5715700.1"
                     /translation="MKKAKSFLYLTQLNTRRIFRDFKYVLLIIALPMFFYVIYSEIFP
                     QNAAVNGISWKEYSLISLICFGIMGNAINLLGTKVANEKNDNWYAYLKVSVINPNAYM
                     MSYLFSYFLISFIFSVAMILLGYFYNDIHIAFYKLVEIVILLNVFSFAFLFLALIIGQ
                     LGSAAQPIGTIVYLLLSFLGGLWIPVDAMPKHMQAFAEILPSYRYGHIGWSILSEGRI
                     HIEDVLYLIGYAILFFIIFLVLSKVNGKNK"
     gene            complement(33351..34055)
                     /locus_tag="PTC28_000382"
     CDS             complement(33351..34055)
                     /locus_tag="PTC28_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5715701.1"
                     /translation="MGNIFEINDVSKTFGKNKVLDAVDLSVNQGEIVGLLGLNGQGKS
                     TLIKIVLGLLKQNSGKVIKNIDFKQQCGVVLQEVAMPEKMKVKEWLELLKSYSEHQQD
                     TDDILKEVDLVKEKNQYCTRLSGGQKRRLQYAAALVNCPQFLVLDEPTTGMDVASKEL
                     FWEHVRSKVEEEKMSVLLISHDLEEIAAFATRIVILHKGKIVLNEQVEVLFNTFDHKG
                     DKLKKIFKEKVLYEKG"
     gene            complement(34070..35032)
                     /locus_tag="PTC28_000383"
     CDS             complement(34070..35032)
                     /locus_tag="PTC28_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715702.1"
                     /translation="MMKEMIYFKRETPLQEISLFLRPYEKMNSDFAHVLEHILTARVK
                     DDGFHILGAHATEDYIKITLKDDFDIELFKPAPYLYEFNQQEFNRALSEIKQERALEN
                     KEIKNIMNKMRGLKQDAIVNQDLEYYNGLLQNTLDTFSFIFINNDICNEVAHHVFLKD
                     EVIEKVTQPMTAKSGTLSHNKVEFFFKYINIPVHSIQEASTIFYIQKLIGFINKKMAN
                     LRSEGIYYSIVFPMYSRKQIELFLLISFTEDVKRDFNLDIEKMLDAYDIHESIDINNG
                     EQAYTYKENLSVIYLSPKFLMNSIPPVNEEAIRITQQMIQKIIR"
     gene            complement(35029..35841)
                     /locus_tag="PTC28_000384"
     CDS             complement(35029..35841)
                     /locus_tag="PTC28_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SagB family peptide dehydrogenase"
                     /protein_id="HDK5715703.1"
                     /translation="MEHFKSIMISNDYATRLSSKCVLSQTYHQNTKHSKRYLMSNMYQ
                     SRVLLNSPNFLKATQSPERYFPTQQHFKLNAHSSGLLTEYLDKRRSQVHSPDKDAFID
                     LNVLSDLFWAAYGKNSQNKRVVPSAGALYPLEIYGIVFNDYENFKKGLYHYNPSTHTL
                     SLLDNGAHVFDISQYIMRYQNMEHPSIIFFITAVFSRATFKYDDRAYRYILLEAGAVA
                     QNISLMATHYNLVSTSIGGTDDFKVEEMLKIDGNHESIVDCVFITKDREAVL"
     gene            complement(35861..37081)
                     /locus_tag="PTC28_000385"
     CDS             complement(35861..37081)
                     /locus_tag="PTC28_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcaO-like family protein"
                     /protein_id="HDK5715704.1"
                     /translation="MTVKLKAQNFVDEKYGIIKNIYDLPTYYGLPKVYVKMAFGGQYN
                     TAGFNASGAGITEAQAVNSAVGEYIERYSCLHPHRVMKVSKGVVKINPQKINASASAN
                     LDDYQWIHGYDLIQKRTVALPVDAVYLTYRSNKKQSWMTTATGAACGPNLKACFWKGI
                     AEIFERDAFQYIWRRQIACEQIRINDNRELRSYFNRYIKSENIQFKLYKMDMDWDVPA
                     VFGVAILPNKGCVVAASVRPTWIEACKKTLLELAQSIVGYAAIIFKVDENIEVHSYDE
                     VKEYQDHSLLYFNDRMSQHLSFLDGHQHIFRIPENEIQPDDDEAVALFIEKIKSIDKQ
                     VYFVDVTSEEIKHTDWKVGKTIIPGMLDIEPHFIKHLESSRLNEVDRNLIKMKKRQPN
                     ELKNSQPIVPHPFP"
     gene            complement(37078..37929)
                     /locus_tag="PTC28_000386"
     CDS             complement(37078..37929)
                     /locus_tag="PTC28_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715705.1"
                     /translation="MKTNIDYVFKDKSIYIKSDEQIFELSGISQESFIKIWNEIQEGH
                     LHCEEQDVVKKKIIEFLKTIHAFEDVANTASFLQMIGLKMEHKAFENHVIGICGDDDL
                     VELYIRKSPSQNVVNLNEEVTDDYDIGLIILRKFNRKRITKCNEMMFNNGVPYNSVIF
                     DNVSFEVTYTIPKETSCLNCKRLRETENNVYGEVFSLFNDSSHESKEYVPEEIIQLAL
                     SFVAVQMLKEAMQMNDLSVENELIQTVYAYSLLNEGWRTHNLFKHPNCELCFPESVNT
                     QVFEVRL"
BASE COUNT        10799 a         8318 c         6566 g        12541 t
ORIGIN      
        1 atacttacaa ttctgttatt aacaaaaact agaacaacag cgaagtgcat catgtcctag
       61 tttttcattt tcaacaactt tttattggaa tgagaaaaaa tctgcgcctc tctttatatc
      121 cttacccgta tctatcttgt atggtgttga aaacctttta tcaaagctga accctatcaa
      181 cttattcttt atctacgttt cttcgtttat gctttatgac tttctttttc acgaatacct
      241 tcaagcatac ggactgtcat tttctccaag tcatactgtg gattaaagcc ccattcgcca
      301 cgtgcacaac tcgtatcgat actatctggc caactttccg cgatatcttg acggactgga
      361 tcaacatcat acgttaattt aaagtctgga atatgtgctt gaatcgcttc cttaatcatt
      421 tcaggttcaa gactcatcgc actcaagtta taggcattgc gatggatgag tttgccacca
      481 tctgcttcca ttaattgaat aatcgcatca atcgcatcat ccataaacat catatccata
      541 tacgtgtctt tttgaatata gctcgtatat ttaccttctc tcacggcttg gaaataaata
      601 tcaaccgcat aatccgtcgt gccaccaccc ggctctttaa cgtatgaaat gagccctggg
      661 aatcgcacgc tacgagtatc cacaccaaac ttagtaaagt aatagtcaca taacaattct
      721 cctgatactt tgttgacgcc gtacattgta tttggacgtt gaatggtcac ttgtgctgta
      781 tttttcttag gtgtgtctgg tccaaacgca ccgattgaac ttggtgtaaa aaattgtaag
      841 ttgtattcac gtgctgcttc taatgcgttc actaaaccac ccatgtttaa gttccatgcg
      901 agtaacgggt tttgctcaca cgtcgctgat aacaatgccg ccatgtgcat caacgtgtct
      961 ggtttaaatg attccactaa ttgaaccatt ttgtctgcat ctgtgacatc aagaatttca
     1021 aatggtcccg ctgccacaat agaattcgct tccggttcac gaatatctgt cgctaacaca
     1081 ttttcattgc cgtagatttc acgacatctc gcaaccaatt ccgttccaat ttgccctaac
     1141 gcaccggtaa tcataattct tttcatcatc ttccatctcc aatctgtttc tctcgtgtgg
     1201 acatatgtat tctatgtaca atcattccat gtcatataca ctcagattat atcacttaag
     1261 cgctttcttg tacacgtatc atatacatta aaatacagca gaacccgtaa aacttcaaat
     1321 aaaaataaaa agaggcagcc caccctcaga tgcactccct ctacttactt atgctattcg
     1381 ataatgccga gttctttacc gacacgcgca tagacttcta atgcttgatc taacatatct
     1441 gttgtatgtg cagcagttgg catgttacgt acacgacccg taccacgcgg aactgttggg
     1501 aacacaatcg atttcacgta aatgccttct tccatcaaac gtttactgaa ttgttgtgtt
     1561 ttcttttcat ccccaataat cacaggtgta atcggtgttt cagattgacc tgtatcaaag
     1621 cctaggcgtg ataagccctc ttttaagtaa ttcgcatttt cccataaacg gtcatgcaat
     1681 tctgttgaag ccattaactt tttaaccgct tcagtaatcg cctttgtatc tccaggcgct
     1741 aatgaagttg agaataagaa tggacgtgat tgcgctttta accaatcaat caatttttgt
     1801 gaaccagcaa cataaccgcc aacaacacca atcgcttttg ataatgtacc gatttggaag
     1861 tcgactttat cttgcaagcc aaaatgtttc accgttcctg cacctctacc catcacacct
     1921 gaaccgtgtg catcgtctac atacaccata atgccatatt gttcacaaat ttcgacgatt
     1981 tcaggtaatt ttgcaacgtc gccgtccata ctgaagacac cgtcagtaat gtacatcact
     2041 ttgttgtatt gtcccgattc aacagcttct ttcgcttttt gacgtaaatc atccatatct
     2101 gaatggttca cacgaataat tttcgctttt gataaacgac acccatcaat aattgatgca
     2161 tggttcaatt catcagataa gatcgcatca tttttattca tcacggctga aatagctgcc
     2221 atgttacagt taaagcctga ttgatatgcg acagctgctt ctgtcccttt gaactccgct
     2281 aacgttgatt ctaactcatc atgtaagtct aatgtcccgt tgattgaacg taccgcacca
     2341 gcaccgacac catgtgaatc aatcgcgttt ttagcagcag tttttaaatc ttcatttgtc
     2401 gctaagccta aatagttgtt tgatgacaaa ttgatatatt tcttgccgtt aatttgaatt
     2461 tctggcccat ttgcaccttc aactgtatca atttcattat acagtccatt ttcttttaaa
     2521 tgattcaaat tttcatcaag aaagtcgttt aattgttgta ccacctgaat ttcccctttc
     2581 acttttaaat ctccttaatc ataacgcatt ttgaacaaac ttaaaagcag gtgtataata
     2641 aatgccataa tcaaattgaa ggagagaaca agcgtgacgg attggttcca attggcttat
     2701 gacaaagaac aggagatggt tcaaacacgg cgctatctgc atcaaaatcc tgaattgtca
     2761 tttcaagaaa caaaaacaca tgcctatatt ttgcaacgac ttcaacaatt aaattttgaa
     2821 attgacgaaa aagtgggacg caacggcatt attgcacgaa tcacagggga tgaatcaggt
     2881 tcaacaattg cattacgtgc ggattttgat gcactcccga ttgaagattt aaaagaggtg
     2941 ccttatcgtt ctcaagttcc aggtgtcatg catgcgtgtg gtcatgacgg ccatacgacg
     3001 attttattga ccgtcgctga attactacat gcgcatcaaa ctcaattaaa aggaacagtc
     3061 gtcttaattt ttcaatatgg tgaagaagtg atgcctggcg gtgcgcaaga aatgattgca
     3121 gataacgcct tgatgggtgt cgataaaata tatggcaatc atttatggag cggttatccg
     3181 actgggacga ttcacacacg accaggtccg atgatggcac aacctgacga atttaacatc
     3241 actattcacg gtaaaggcgg tcacggggct aaaccacacg aaacgattga tccgattgtc
     3301 atccttgcag agtttatttt aagcgcacaa aaaatcgttt ctcgtacatt agatcctgtc
     3361 aaacaagccg taatttcttt cggtaaaatt gaagccggtg aagcagataa tgtgattcct
     3421 gatacagcga cttgtcgtgg caccgtgcgc actttcgaaa cagatgtcca agcccatatt
     3481 tatcacaaga tggatttgtt actccaagga ctcgcgctcg ctaacgacat cacttataca
     3541 tttgactaca ttaaaggcta tttacctgtt tacaaccacg aagcatcagc agaaatcgtt
     3601 aaaaatgctg ctcatgcgtt gaacttccga taccaagagt ccgatttaat gatggttggt
     3661 gaagactttt cattttattt aaaagcaaga cctggcgcat ttttcttaac tggttgtggt
     3721 agcgctcaaa aaggcacgga ttggccacat cacagtccgc attttgatat tgacgaagat
     3781 gcgatgaaat acgccgtgag cacatttatg aagattttag aacttgaagg gatattcaaa
     3841 gatgaactga aaagaacatg acgaagatag gatacaaaaa gttttgatgc tattgctgca
     3901 atcatttcgt ttaactttcc ctctctctat gatttatatt tttgattgcc ttcatggctt
     3961 cgcgttccga ggggttggtc cttcaacgca ctaacgcttg attaaactgt tatatgggtt
     4021 gaggtgttat tggattttgg gagcagtaca gaaatctcat ttacatcaaa tatttcgtcg
     4081 cactgcctcc gcatggctga ttcgacttct taaaagtgta gacattgaga agtcatacag
     4141 ctactgcgat aaacagtaac cactattaaa gagaagagat aactgtcagc agtttgcacg
     4201 cattccctca ggagtcttag tgtactgggc agtttgatat caaatacagc gaaactgagc
     4261 ccaagtttat caaatcaaga aagccatagt atcaattttg tatcccattc gcactcattt
     4321 tccaacagtt ttaaaatcat taataaataa tcaatctata attcgttgaa atggggctgg
     4381 gaaaacttga tgtcccggct ccgtttcctt ttctctataa aatttcacac tgaaaggaat
     4441 gttacgatgg gagatatact ctatcaacat gggacactgg gtacactcat ggcaggatta
     4501 ttagaaggca ctgcaacaat tcaagacatc ctcaaacaag gtgatgcggg tttaggcacg
     4561 ttagctggat cggatggtga agtcattttt atagacggcc aagcatttca cgccaatgcg
     4621 caaaacgaat tcacgcaact cactggagaa gaactgacgc ctttcgcgac gatcacacga
     4681 ttccgagcac atcatacgtt taaaacgacc aatcaatccg cacaacatgc attatcacag
     4741 gtccgcacca aaatgcgtag tcaaaatgcc ttttcagcag tcaaaatcac tggaacattt
     4801 caacatatgc atgtgagaat gatgccggga cagacccctc cataccgtcg cttaattgaa
     4861 tccgctcagc aacaacccga gtatacacga tccaatattt caggcacact cattggcttt
     4921 tatacacccg aactgtttca tggcattggc gctggtggct ttcatattca ctttgccgat
     4981 gatgcacgaa cattcggtgg acatgtatta gattttcaca ttgaagcagc taacgtcgaa
     5041 attcaagatt ttgagacgct gacacaacat tttccagtca attatcgttc tttcacagag
     5101 gctgaaattg attatgagga tattaatgaa gaaattagag aagttgagta aagttttaaa
     5161 gcagtgtcta aaaatggacg caaatatccc ctttttcaac tttacaggct ataaaaaaag
     5221 agctggccga ggccaactct tttttatcta tatttgtgat agattattgt tcgatgttag
     5281 ttacaacgcc tgatcctaca gtacgtccac cttcacgaat tgagaaacga gtaccgtctt
     5341 cgatagcgat tggagaaatt aattcaactt ccatttcaac gttatcgcca ggcattacca
     5401 tttcagtacc ttctggtaag tttacaacac cagttacgtc agtagtacgg aaatagaatt
     5461 gtgggcggta gttagagaag aatggtgtat gacgaccacc ttcgtctttt gataatacgt
     5521 aaacttccgc tttaaatttt gtgtgtggtg tgattgaacc aggagcagct aatacttgac
     5581 cacggttgat gtcttcacgt gcaacaccac gtaataaagc accaatgttg tcaccagctt
     5641 cagcgtagtc taataactta cggaacattt ctacaccagt aacagttgtt ttagaagatt
     5701 cttcagttaa accgatgatt tctacttcgt caccaacttt gatttgacca cgttcaacac
     5761 gaccagtagc aactgtacca cgacctgtga ttgagaatac gtcctcaaca ggcatcatga
     5821 atggtttgtc tgagtcacgg tctggagttg gaatgtaagt gtctacagct tccattaatt
     5881 ctaagatttt ttcttcgtat tgtgcatcgc cttctaaagc ttttaatgct gaaccagcga
     5941 ttacaggtac gtcatcacct gggaagtcgt attcagataa taagtcacgt acttccattt
     6001 ctactaattc taataattct tcgtcgtcta ccatgtcaac tttgtttaag aatacaacta
     6061 atgctggtac accaacgtta cgtgataaaa gaatgtgctc acgagtttgt ggcattggac
     6121 catcagcagc agatactact aagataccac cgtccatttg tgcagcacca gtgatcatgt
     6181 ttttaacata gtcagcgtgt cctgggcagt caacgtgtgc atagtgacgt ttgtcagttt
     6241 ggtactcgat gtgtgaagta ttgattgtga taccacgttc tttttcttct ggagcgttgt
     6301 caatcatgtc gtatgattgt gcaactgagt caccatgttt tgctaataca gttgcgattg
     6361 cagctgttaa agttgtttta ccatggtcaa cgtgaccgat agtaccaata ttggcatgtt
     6421 cttttgagcg atcgaatttt tcttttgcca ttatgaaatc tctcctcttt gattaagaat
     6481 tattatttta atatctctca tgaaagttac tcaccaacat gagatagata atgttatttc
     6541 ctttataaat catttcttgg aaaaaatcaa tttaaaaacc agtcgctatt tgagttaccc
     6601 tcaagggcga cgtgtcaaac taagatgatg aattattcac ctttgttctt tttaatgatc
     6661 tcttcagaaa ttgatttagg tacttctgca tagtgatcga agtacatagt gtaagtaccg
     6721 cgaccttgcg tgttagaacg taatgaagtt gcgtaaccga acatttctga aagtggtaca
     6781 taagcgttaa caacttgtgc gttaccacgt ggttccatac catctacacg tccacgacga
     6841 gcagtaacgt cacccatgat gtcacccatg tattcttcag gcatttcgat agtgactttc
     6901 atcatcggtt ctaagataac tggatcacat tttttagcag cttctttaag tgctaaagat
     6961 gcagcaattt tgaaggccat ttcagatgaa tcgacatcat ggtatgaacc atcaaataat
     7021 ttagctttaa catcgattaa tggataacca gctaatacac cattttccat tgcgtcttta
     7081 agaccttgtt caactgatgg gatgtattca cgaggaacaa caccaccaac gatagcgttt
     7141 tcgaattcga aacctgcgcc tgtttcattt ggtgtgaatt caatgtgaac gtcaccatat
     7201 tgaccacgac caccagattg acgagagaat ttaccttgaa cggctgcaga agatttgaat
     7261 gtttcacggt aagataccat tggtgcaccc acgtttgctt ctacattaaa ttctttcttc
     7321 atacggtcaa caatgatgtc aaggtgaagt tcacccatac caccaatgat aacttgacca
     7381 gtttcttcat ctgtgtgcgc tttgaaagta gggtcttctt cttgaagttt cacaagcgct
     7441 tgagtcattt tatcttggtc tgcttttgat ttaggttcaa ctgataagtg aataactggc
     7501 tctgggaatt ccattgactc aaggatgatg tcatttttct ctccacaaag tgtatcacct
     7561 gtaccagtgt ctttaagacc tacagctgct gcgatatcac cagaatatac agtgctgatt
     7621 tcttcacgtg agttggcgtg catttgtaaa atacgaccta cacgttcacg tttaccttta
     7681 gttgagtttt taacgtatga acctgaagtt aaagtaccag agtaaacacg gaagaaagtt
     7741 aatttaccaa cgtaagggtc agtcataacc ttaaatgcta atgcagcgaa ttctgcatcg
     7801 tcgtccgctt tagcgataac ttcttcatca ggatcatccg cacgatgacc aacgattggt
     7861 ttaacgtcta aaggtgatgg aaggtagtca attactgcgt ctaacattaa ttgaacacct
     7921 ttgtttttga atgctgtacc acaaagtact gggtagaact caacatctgt tgttgcttga
     7981 cggattgcgt ctttaagctc atcaacagtg atttcttgtt cttcaaagat tttttccatt
     8041 aagctttcat ttgtttcagc aacagcttca atcaatgctt cacgtgcttc ttcagcgcgc
     8101 tcacgatagt cttcaggaat ttcagtttct tcaatttcag ttcctaaatc gttcgtgtat
     8161 ttgaaacatt tcattgttac taagtcaatg atagctgaga attcatcttc agcaccgatt
     8221 ggtaattgaa ttggtgcagc attggcttgt aaacggtcat gtaaagtgct tacagcgtaa
     8281 tcgaagttag caccgatttt gtccattttg tttacaaata cgatacgagg tacaccgtaa
     8341 gttgttgctt gacgccaaac tgtttcagtt tgaggttcta cacctgattg cgcgtcaaga
     8401 actgttaccg caccatcaag tacacgcaat gaacgttcaa cttctacagt gaagtctacg
     8461 tgcccaggtg tgtcgatgat gtttacacgg tgatttttcc attcagcagt tgtagccgct
     8521 gaagtgatcg taataccacg gtcttgctct tgttccatcc agtccatttg tgaagcaccc
     8581 tcatgtgttt caccaatttt gtggatacgt ccagtgtaat aaagaatacg ttcagtcgtc
     8641 gtcgttttac cagcatcgat gtgcgccatg ataccgatat tacgagtgtt ctttaaagaa
     8701 aaatctcttc ccatgggtat tctttctcct tccagaatat aggattatat gattagatat
     8761 agctttaccc taagcatgta tagaactgtt caatcaacgg ctaaaaagca ggttgatggc
     8821 actatacaga aattgctcag ggaattcgca aatatcttac cagcggtagt gagcgaatgc
     8881 tttgttcgct tcagccattt tgtgagtgtc ctcacgtttc ttaactgcac caccagtgtt
     8941 gttagctgcg tctaagattt cgttagctaa acgctcttcc atagtttttt caccacgaag
     9001 acgcgcatag tttactaacc aacgtaaacc taaagtagta cgacgctctg gacgaacttc
     9061 tacaggtact tggtagtttg aaccacctac acggcgagct ttaacttcaa gtactggcat
     9121 aatattgttg attgcttcat cgaaaacttc cattgcatca cgaccagaac gttcttgaac
     9181 taagtcgaat gctgagtaaa gaatacgttg agcagttcca cgcttaccat ctaacataat
     9241 cttgttgatt aattttgtta ctaacttaga gttgtgaatt ggatctggta acacatctct
     9301 tttaggtact gatcctttac gaggcataat acaagtcctc ccttcctatt atagtatatt
     9361 tgatttcttt catcatgatt aaatgagatt tttacaatct tttaatctta ttttttaggt
     9421 tttttagtac cgtataatga acggctttgc atacgaccgt caacacctga cgtatctaat
     9481 gcaccacgaa cgatatggta acgcacacca ggtaagtctt ttacacgtcc accacgtaca
     9541 agtacaacac tgtgttcttg taagttgtgt ccgataccag ggatgtatgc gttgatttca
     9601 atgttgtttg ataaacgcac acgcgcatat ttacgtaacg ctgagtttgg ttttttagga
     9661 gtcattgtac ccacacgtgt acatacgcca cgtttttgtg gagaattcaa tttagtgaat
     9721 tgtttctttt gactgttaaa acctctattt aaagctggtg aatcagattt tttagttttg
     9781 ctttgtcttg gtttacgtac taattggtta atagtaggca ttcaagtttc ctcctctctt
     9841 catttcttaa tcccacacat ccaggtggtt catttttggg ttaaataaaa tttagtaagc
     9901 atcatactta ctaatctcac ttgagcaaag caacgactgt cgcctttaca tttataccaa
     9961 catattctcc aagtgcttgt cgacttgaga agaattcgat aggtatcata ttttgattgg
    10021 caaagcttaa cacgcgcgcg agcaaatgca cattcacatc ttcgccgata atcagtttgt
    10081 ttacgcgttg attacgaagc gcttttaacg tctccttaag accaaccacg taggcttgtt
    10141 tgtcaaagcg tgtgactttt tcattagaca tttacatatc ctccaaagta ctgcttgcat
    10201 caacctttac tatattatca ttttagcaaa tcgttcgtca acagttattc gaaaatattc
    10261 tgtgattttg ttgaagattt tcacagtcag ttcgaacaag aagtcaccga tattgatgac
    10321 ttctgttcaa ctcactggaa atgaaaagtt attccacagt cacttgattt tcaagacctg
    10381 gctgtgtcac ttcatccttt tcaatatcaa ctttactgta acgtttcata cctgtacctg
    10441 cagggattaa cttaccgata ataacgttct ctttaagacc gagaagatca tcacgtttac
    10501 ctttaatcgc tgcgtcagtt aagacacgtg ttgtttcttg gaatgatgct gcagataaga
    10561 agctttctgt ttcaagagac gcttttgtaa taccaagcaa tactggtttg gcagttgctg
    10621 gacgtttacg ctctttaaac gcttcacggt ttgcatctgt gaagttgtgg atgtcaacaa
    10681 gtgaacctgg taataatttc gtgtcaccag cttcaatgat acgcacttta cgtaacattt
    10741 gacgtaccat aacctcaacg tgtttgtcgt cgatttctac accttgcata cggtaaactt
    10801 tttgtacctc tttaagtaag tactcttctg ttgctgttaa accagcgata gacaggaagt
    10861 ttttcggctc gattgaacct tccgttaaga cttcaccacg tgcaactgat tgaccgattt
    10921 cgactttcag acgtgatgtt cctgatgcaa ggtaagaacg ggtttcgtta gcacctttaa
    10981 caacgatttc ttgttgtcta tctttaccta ctgtgatgtt atcaatgaca ccttcaattt
    11041 cagtaatcac tgcttgacct ttagggttac gtgcttcgaa aatctcttgg atacgaggta
    11101 aaccttgcgt gatatcgctt ccggctaccc cacctgtatg gaacgtacgc attgttaact
    11161 gtgtacctgg ttcaccgatt gattgtgcag cgatagttcc gactgcttca ccgacttcta
    11221 ctttttcacc agttgctaag tttttaccgt aacatttttc acatacaccg tgacgtgtgt
    11281 tacatgtaaa tgcagagcgg atgtacattt cttcaatacc tgcatccgta atctctttcg
    11341 caatttcagg tgtaatcaat tcatccggac gaatgatgat ttcgtctgtc tctggatgac
    11401 gtactgtttc tttagaataa cgaccttcaa tacgttcgat aaatggttcg atcatttctg
    11461 taccttcttt gatatctgaa acgagtaaac cacgatccgt accacagtct tcttcacgta
    11521 cgataacgtc ttgagcaacg tcaacgagac gacgtgttaa gtaacctgag tcggcagtct
    11581 taagtgctgt atcggcaaga cctttacgcg caccgtgagt agagataaag tactctaata
    11641 ccgttaaacc ttcacggaat gatgatgtga ttggaagttc gataatttta cctgatggcg
    11701 cggccattaa accacgcata ccagcaagtt gcgtaaagtt agaggcgtta ccacgggcac
    11761 cagagtcact catcatgaag attgggttcg tcttatcaag agacttcatc aatttcgctt
    11821 ggattctatc tttcgcattt gtccaaattt caataaccgc attgtaacgt tcttcttctg
    11881 ttaataaacc acggttaaat tgtttttgga cgcgttcaac taatttctca gactcgtcta
    11941 aaatctcttg tttatccggt aataccacga tgtcagctac accaactgta atacctgctt
    12001 ttgaagaata tttgaaacct aagtctttca ttaagtcaag catcatagac gtatctgtaa
    12061 tgctgaagcg attgaacact tctgcgataa tgtttcctaa gaattttttg ttgaatggtg
    12121 gcacaagttc agtgttttca aagtactcag ctaagccacc ttctccaagt tcagatgcat
    12181 caacgaaata tttatcaggt gtactctttt ctaagttcgt cgctgttggt tcgttaatgt
    12241 atgcaaatga atctggaata atttcgttaa agatcacttt acctacagaa gttgttaaga
    12301 ttttgcgatt ttgctcttcg gtaaatgttg ggttgttgaa tgatgacgct tgaacaccga
    12361 tacgcgtatg caagtgaacg tgcccattcg cataagcttt aatcacttca tttgtatcat
    12421 tgaacatcat acccgtattg actgcatctt tacgctctaa tgttaagtaa tagttaccta
    12481 aaaccatgtc ctgagacggt gtcacaactg gtttaccatc tttagggttc aagatgtttt
    12541 gagcggcaag cattaacata cgtgcttcag cttgtgcttc ttttgataaa ggtacgtgaa
    12601 ccgccatttg gtcaccatca aagtcggcgt tataagctgt agttacaagt gggtgtaatc
    12661 ggatcgcacg gccttcaact aaagtcggct cgaacgcttg gatacccaat ctgtgtaatg
    12721 ttggtgcacg gttaagtaat actgggtgtt cgataatcac atcttctaat acatcccaaa
    12781 cttcatcttc tgtacgctca attttacttt tcgcgttttt gatgtttgtc gcaatttcac
    12841 gttgtacaag ttctttcatg acaaacggct tgaacaattc taatgccatt tcttttggta
    12901 gaccacattg atacattttc aagtttggtc ctaccgcgat aactgaacga ccagaatagt
    12961 ctacacgttt accaagtaag ttttgacgga aacgaccttg tttacctttc aacatgtgtg
    13021 aaagtgattt aagcggacgg ttacccggac ctgttaccgg acgaccacga cgaccgttat
    13081 cgattaatgc gtcaacagct tcttgtaaca tacgtttttc gttttgtacg atgatgccag
    13141 gcgcacccaa atctaataaa cgttttaaac ggttgttacg gttgatgaca cgacgatata
    13201 aatcatttaa gtcacttgtc gcaaaacggc caccatcaag ttgtaccatt ggacggatct
    13261 caggtggaat aattggtagt acatctaaaa tcatccacgc tgggttgttg ccagagttac
    13321 ggaatgattc cacaacttct aaacgtttaa tggcacgtgt taaacgttga ccagtcgcag
    13381 attctaactc atcacgaagc attttcaact cttcatctaa gttgatttct tctaataagt
    13441 ctttaatccc ttctgcaccc attttggcag taaattgacc agggaatttg tcatagtaat
    13501 cacggaattc tgcttctgaa agtaatgttt tcttctctaa acctgttggg cctggatcaa
    13561 ccacaacgta tgaagcaaag taaatcactt cttctaatgc acgtggtgac atgtctaata
    13621 agagacccat acggcttgga atccctttga agtaccaaat gtgagacaca ggtgctgcta
    13681 actcaatgtg tcccatacgt tcacgacgta cttttgattt tgtaacttca acaccacaac
    13741 ggtcacaaat cataccttta tagcgtacac gtttatattt cccacaacta cattcccagt
    13801 cttttgttgg tccgaaaatt ctttcacaga aaagaccatc tttttctggt tttaacgtac
    13861 ggtagttaat tgtttctggc tttttgacct caccatatga ccaagaacga attttttcag
    13921 gtgaagcgag tcctattttc atgtaatgga atttatttac atcaatcaag gagcctacct
    13981 cctttagttt aaattaactg tgctagttga ttgatttaca atttatctta aaaatgttgc
    14041 agtatcgggc atgcatcgaa acccaacccc tctcgttgga ttccgagcac attgccgaaa
    14101 cgattaatcg cacatcacac ttgttgcatt caaagtgtga tatttgaata caaacgcaag
    14161 cttcatcaag cgtttctatt ccgcttaatc tatctacaat tcatcattgt tcgttaaatt
    14221 ctttttgtga ttctggaaca cttgacggtt gcatgttgac tttgcgatct ggaatatcat
    14281 catcgtctaa gtcacgcatt tcaatttcgt tatcttgttc gtccatcact ttaacgtcaa
    14341 gacctaaact ttgtaattct ttcatcaata cacggaatga ttctggaaca cttggtcttg
    14401 agatgttttc acctttaacg atagcttcgt aagttttcac acggcctact gtgtcgtctg
    14461 atttgtatgt gagaatttct tgtaatgtgt atgccgcacc gtatgcttca agtgcccata
    14521 cctccatctc accaaatctt tgtccaccga attgtgcttt accaccaagc ggttgttgtg
    14581 taacaagtga gtaaggtcct gtagaacgtg cgtgaagctt gtcatcaacc atgtgtgcaa
    14641 gtttcaacat gtacatcaca cctacagaga tacggttgtc gaatggttca cctgtacgtc
    14701 catcgtaaag aacagtttta ccatcacgtg ccatacctgc ttcttcaatt gtagaccata
    14761 cgtcatcatc gttcgcacca tcgaatactg gtgatgcaac atggattcct aagtttttag
    14821 ccgccatacc taagtgaagc tctaaaactt gtccgatgtt catacgagat ggtacaccga
    14881 gtgggttcaa catgatatcg attggacgac cgtctggtaa gtacggcatg tcttcttcag
    14941 gaacaatttt agagatgaca cctttgttac cgtgacgacc acacattttg tcccctacat
    15001 gaattttacg tttttgaaca atgtacacac gtacgagttg gttgacacct ggtgaaagtg
    15061 aatcatcgcc ttcttcacga ttgaacactt taacatcaag tacaataccg ccagcgccat
    15121 gaggtacacg taatgatgta tcacgaactt cacgtgcttt ttcaccaaag atggcatgta
    15181 ataaacgttc ttcagcagtt aattccgtta cacctttagg cgttacttta cctactaaaa
    15241 tgtcgccgtc tttaacttct gcaccaacgt aaacgatacc tcgatcatct aagtttttca
    15301 gtgcattttc agatacgttt ggaatatcac gcgtaatttc ttcaggtcca agtttagtgt
    15361 cacgtgcttc agattcatac tcttcaatat gaatagacgt atacacatcg tctttaacta
    15421 aacgttcgct catgataacg gcatcctcgt agttgtaacc gtcccaagtc atgaaaccaa
    15481 cgacaacgtt acgacctaat gccatttcac caagttccat tgaaggacca tcagcaagga
    15541 tttcaccttt ttctacaatg tcaccttttg caatgattgg acgttggtta taacatgtac
    15601 cagagtttga acgtttgaat ttcgctaatg gataacgatc taacgtacca tcgacttctt
    15661 gaccgttttc ttcaactaaa cgacgtacta aaatttcgct tgattgcaca tgttcaacac
    15721 gaccgcgata tttagaaatc acagcagccc ctgagtcacg tgcagcaacg tgttccatac
    15781 ctgttcctac aaatggagat tcagggttta acaatggtac cgcttgacgt tgcatgttcg
    15841 cacccattaa cgcacggtta gagtcatcgt tttctaagaa tgggatacac gctgtcgcag
    15901 cagatacaac ttgcttcggt gatacgtcca tgtagtccat tttttcttta gccattgttg
    15961 tgttgttacc acggaagcga cacacaattt catcatcaat aaagcgaccg ttttcatcaa
    16021 gacgtgagtt cgcttgtgcg acaacgtaac tgtcttcttc atcagcagtt aagtagtcga
    16081 tttggtcagt gatcgtgttt gtttcgatat cgactttacg atatggtgtt tcgataaagc
    16141 caaattcgtt cacacgtgca taacttgata atgagttgat taaaccaatg tttggaccct
    16201 caggtgtttc gattggacac atacgaccat agtgagagta gtggacgtca cgtacttcca
    16261 tttgtgcacg ttcacgcgtc aaaccaccag gtcctaatgc tgatagacga cgtttgtttg
    16321 tcaactcagc aagtgggttc gcttggtcca tgaattgaga taattgagag ctaccaaaga
    16381 actctttaat tgacgcaatt actgggcgaa tattaattaa ttgttgcggt gtgatagaat
    16441 ctgtatcttg gattgacatt ctttcacgta ccacacgttc cattcttgat aaaccgatac
    16501 ggaattggtt ttgtaacaac tcacctactg aacgtagacg acggttacca aggtggtcga
    16561 tatcgtctgt gtaaccaata ccatgtaata agttgaagaa gtatgacata gatgccacaa
    16621 tatcagccgg tgtaatacat ttcacttctg aatctgggaa tgcattaccg ataactgttg
    16681 ttgtacgttc ttcatcatca tttggtacat aaactttaat agactgaatt tctacaggct
    16741 catcaatgat actatttgga agctcataga cttgtgcatt cgcgtttgtt tcaagaacgt
    16801 ccataatttc atctaattta cgacgatcta aaacagtgcc ctcttcggca acaatttcac
    16861 ctgtttctgt attaacgata ggttcagcta atttttgatt gaataggcgg tgttttaaat
    16921 gtaatttttt gtttgcttta taacgtccaa cgcttgctaa atcataacgt ttagggtcaa
    16981 agaaacgtga atataataag ctttttgcgt tttctacagt tggtggttca cccggacgta
    17041 aacgttcata aatttcaagt aacgcttgtt ctgtattttc tgtgctatct ttttctaatg
    17101 tattacgtaa atattcgtta tccccaatta attcaatgat ttcttggtct gttgaataac
    17161 ctaacgcacg taataatact gttaatggta actttctcgt tctgtcgata cgcacataaa
    17221 cgacatcttt tgcatctgtt tcgtattcca accaagcacc acggttagga atcactgtcg
    17281 catcataatt cacgcgtcca tttttatcta acttttcatt gaagtataca gatggtgaac
    17341 gaactaattg tgatacgata acacgttctg ccccgttaat cacaaaagta cccgtttctg
    17401 tcatcaatgg gaaatcaccc ataaatactt cttgatcttt cacttcgcct gtttctttaa
    17461 tgattaaacg aactttcaca cgtaatggcg ccgcataagt agcatcacgg ttttttgatt
    17521 cttctaaatc atacttcggt tcacctaatc tataatcaac aaattctaat gaaagattac
    17581 ccgtgaagtc ttcaatagga gaaatatcac ggaacatttc taataaacct tcttttaaga
    17641 accaatcata cgatttcgtt tgaatttcaa ttaagtttgg taactctaaa acttccgaaa
    17701 ttcttgcgta gtttctacgt ttacgatgtc ttccatattg gacaaattga cctgccaaac
    17761 agattcaccc ctcaaaaatt gtgcgaacac ttttcagccc tcatcatgta acaagacaaa
    17821 aagaaaacgg tagcacataa aacgatgaca ccattttcta ttctataagt cttattttga
    17881 aatgttacaa tgaaacttta accgtaaaag tacacactta ttgaacataa ttatttcatc
    17941 ttacgactat accataaaca agcattaaaa tcaagattta acgcttttta aaatatgata
    18001 gcccttacta tttttaattg attcgacatt gccaaaaaca acttccattt ttttcttcgc
    18061 ggatggcatg ccttgtttct tttgaatcac gacgtacaat tcaccatttg cttcaagaac
    18121 acgatgcgca tcaacgaaaa tttgatggac cacttgcttc cctgcacgaa taggcgggtt
    18181 tgtgacaaca taatgctgtg tctcgttagc aacctgtgat aagccatcac tttcttggat
    18241 tgtcacattc gatagttggt tgcgctgtgc atttttctct gccaaaccta atgcacgatg
    18301 attgacgtct aacatggtaa tatgatcgtt tggcgcgact ttagcgagca ttaatccgat
    18361 aggtccataa ccacacccta catccactat cgtcttcttt tgacctggag gatgtgcatt
    18421 caaaaatgtg tgaacgagca gatcagagcc aaagtcgact tgatctcgag aaaaaacgcc
    18481 tgcatctgta gtgagatgga gttgatgttg ttgatatgcg tatgtaattt ctttttcgtc
    18541 tgttgctgca tcgggatgtg catcatagta atgactcata ggcgttgcac ctctttattg
    18601 tttaatattc aaaaacccgc tattacgtaa tagcgggttt ttcacttatc aatgaattat
    18661 tttaattcta ctgaagcgcc aacttcttct aattgagctt taagtttttc agcttcttct
    18721 ttaggcatag cttctttgat gatgcttggc gcaccgtcaa ctaattcttt agcgtctttt
    18781 aagcctaaac cagttgcttc tttaactgct ttaacaactt tgatttttga tgatccagct
    18841 gaagttaatt caacgtcgaa ttcagttttt tctgctgctg cgtctccgcc tgctgcacct
    18901 gctactgcaa ctggtgctgc tgcagttaca ccaaattctt cttcaattgc ttttactaag
    18961 tcgtttaatt ctaaaactga catttcttta attgcttcaa tgatttgctc ttgattagcc
    19021 atgtttattt tcctccaatt gattaatttt ttaattgatt aattattctg cgttctcttc
    19081 tttgctttct ccaacagctt taaccgcata agcgaagttg cgcattggtg cttgtaatac
    19141 agaaagaagc atagatacaa gaccttcgtg tgatggtaat gaaccaacag ttttcacttc
    19201 gtcagcagtg atgacactac cttccatgat acctgatttg atttctaaag cttcgtgttc
    19261 tttagcgaat ccagcgataa ctttagctgg tgcaaccaca tcttcagttg tgaatgcgac
    19321 tgctgtagga ccagttaaga actcgtctaa gccttcaata ccagcttttt cagctgcacg
    19381 acgtaacatt gtgtttttgt acactttgta ctgaacattt gcttcacgta attgcttacg
    19441 taattctgtt acttctgcta ctgttaaacc acggtagtca acaactactg tagaaacaga
    19501 acctttaagt tgatcagcaa tcacatcaac ttgttgtttt ttcgcttcaa tgattccaga
    19561 cattttgaca cctccataga taagttttgg gtgcttttat aattaagtgg acacttaaat
    19621 taaaaaaaca ctttttaccc acggcaaaaa gtgcttgaat gcgttaacgt tcaagtccat
    19681 tttagcctcg gtaggatgtt gttttaagtt ctttatgaac tcctactgtc ttaggtaaaa
    19741 tattcaacag aatttaatat aaaggttttc gcgtcattcg tcaacctttt ttatatttta
    19801 tgatgcactt aatgattaaa ctaagtgtca atcattaagt gcgcattgaa ttatagtttg
    19861 aaagttgcag tatctacttt gataccagga cccattgtag ttgtcactgc aacagatttg
    19921 aagtaagtac ctttagctga agatggtttt gcttttgtta acacatcttg taaagttttg
    19981 aagttttcaa ctaatttttc agtttcaaat gaaactttac cgatagaagc gtgaacgata
    20041 cctgcttttt cagcacggta ttcaacttta ccagctttga tttcttcaac agctttttta
    20101 acgtccattg ttactgtacc agttttaggg tttggcatta aacctttagg tcctaataca
    20161 cgacctaatt taccaacttc acccatcatg tctggtgttg caacaacaac atcaaagtcg
    20221 aaccaacctt gttggatttt gtttacgtat tcagcatcgc ctacatagtc agcacctgct
    20281 gcttctgctt cagcaatttt atcaccttta gcgaatacta atacacgttg tgatttacca
    20341 gttccgtgtg gtaatactac tgcaccacgg atttgttgat cgtttttacg tgtatcgata
    20401 cctaaacgga atgcaacttc tactgatgca tcgaagttag cgatagacgt ttcttgagct
    20461 aaacgaattg cttcttctac agtgtaaagt gcttggcgat caactttatt taaagcttct
    20521 tgatactttt tacctttttt agccattttt tgtcctcctt tagtggtttt atcggaatgt
    20581 cctcccacgt taacttgcct taatagcaag ttgagcgcag atagcccttt gcgtcaatac
    20641 gcacagaatg atgaaatatg tcattaatca taggcctacc tgcgttcgtt ttcgaaaatt
    20701 tatcgtatca ttttgttaat tgtcaatatg ttgattatta ctcaacaaca atacccatac
    20761 tacgtgcagt accttcaacg atacgcatag ctgcttcttc gtcagcagcg tttaagtcag
    20821 gcattttagt gttagcaatt tcacgtactt gatctttagt tacagttgca actttgtttt
    20881 tgtttggttc accagaacct ttttcaatac ctgctgcttt tttaagtaaa actgctgcag
    20941 gtggtgtttt tgtaatgaat gtaaatgaac ggtcttcata tacataaatt tcaactggaa
    21001 taattaaacc cacttgttct tgtgtacgtg cgttaaattc ctttgtgaaa gccataatgt
    21061 tcacaccggc ttgacctaat gcaggaccaa ctggtggtgc tgggtttgct ttacctgctg
    21121 gaatttgtaa cttaactact ttttctactt ttttagccac gatgtgcacc tccttgatat
    21181 cgtgatgtgg tcacagggct catttttgcc ctcccactct taacatttcg tgacgaaatg
    21241 tagcgctatg aatgcgcgac ctcgttatta taacatttgc gttaacttaa tacaacacat
    21301 tttttgtaac atattatact acaattaaag tttttcgatt tgatcgaatt caacttctac
    21361 aggcgtctct cttccgaaca tgtctacgag aaccgtcaat ttaaacttgt ccgcttcaat
    21421 ttcgtgtatt tcaccgactt gacttgcgaa cggtccagac gtaatgcgca cttgttcacc
    21481 taactcaact tcaacatcga tagatttttc gttcattccc atttgtttca ggatgaaacg
    21541 gacttcatct ggtaacaatg gattcggttt tgaccctgca cctgctgatc ctacgaaacc
    21601 tgtcacacca ggtgtatttc taacgacgta ccaagattcg tcagtcatca caagttcaac
    21661 taaaacataa cccggaaatg ttttcttcat ttgttttttc gctttaccat ctttaacttg
    21721 tgtttcttcc tcttctggaa tgacgactct aaagatttgc tctgtcatat tcattgattc
    21781 gacacgtttt tctaaattct ttttaacttt gttttcgtaa ccagagtagg tatgtactgc
    21841 ataccaacgt tttgcaccta gctcttcaga catgctgaca actcctcgtt cctattttat
    21901 catttcaatt aactgaccaa ttccgatatc taaaccccag aaaaacaaca agaagaacaa
    21961 tacagtcata actacaattg ttgtatactt aacaagctcg ggccctgttg gccaacttgt
    22021 tttttccatt tcggatttaa cgccttggaa gaaactttct tttttcggca taattaattc
    22081 ccctccaatt atttggattc tttatgaagt gtatgcgtat tacatttcac acaaaacttt
    22141 ttcagtatta atcgctccgt cacgttcggt gatttcggta cgtgatagtt tcggttgcca
    22201 catttctcac aatttaacgg cacttttttc aacatttctc accttgcttc tataatacca
    22261 gtttactata cataagttta cattcaattg tcaaaccact ttcttatgtg aggagacttt
    22321 tcaatttttg acgaattcga tacagcgcat tataaacttt cttatctgaa acattcagtt
    22381 cacgtgcaat ttctgcaggt cgccattctg caataaggta atctagcacg cgcatttcaa
    22441 atgcactcaa ctgttgaagt gactgttgta acgtgtcttg aatataatga agatattcgt
    22501 gactatggcg ttgctgctcg gccaactgtg ttcgataact gattgcatag ccatcgacgt
    22561 aatcttcaaa aatgcgctga tgggtcagtt ttttgcgtcg atagtcaagt ttacgccgat
    22621 aaatggtccg cttaatgtaa tgttcgaatg gaacaccaaa ataaaactgc tcgctttgta
    22681 ttttttgata aattgcgaga acaacgtctt gtactaaatc atcacaatct gcttgggcta
    22741 cactaaaatc accaaaactt tttcgcgcga tacgctcaat atggtgaacc aacttttcaa
    22801 ttgcttcggg ttgttgctgt tgcgcacgtt gtatggtttc tgaaacaata tcgtttggat
    22861 tagggatttg tgccatgaaa cttttcctca ccttcgacca atgatgtctt atcatatctg
    22921 tcaaaggtgt ctctctacaa cttgcaaaac gattaatctc gagacttgcc ccgtcttatt
    22981 ttttcaaatt cagataacaa ctcttctgat agctgaatac gtgtacgcgg cttcatttca
    23041 ccaaattcgt ccatcgattt ggtcacactc tctttgttct cttttaaatg gcgccacatt
    23101 tctcttgagg ataaacgata agcacctgtt ccaaaaatgg catgttgttc actcatatca
    23161 ctcgtcacta ccgtaatatg ggtcgtatgc ttattataaa tattatagac atagcgttcg
    23221 ataaaactat ctgctgtttc gtgctctttt gtaaatacga catgcacccc gtgatactca
    23281 tattcagact gtggtgtgcc acgatcataa gcatcaaaca cacacacaat tttacctttt
    23341 gtcactgcac tatagttgga aatttcgatg agcaattgtt ctctcgcttc ttctaaactt
    23401 tctttagcga cacgagtcaa tttttgggac tgaccaatca tgttataacc atctatgatt
    23461 acgtaatagt ccttcatcat ttacttgtca ccgccgatag gttgacgttt acgaaacact
    23521 tcatacatca tcaaactcgc tgcgaccgat gcatttaaac tgttcacatg gccaaccatt
    23581 ggaattttaa tgtaaaagtc acatttctct ttcacacgac gactcatccc ttgaccttca
    23641 ctgccgatga caatcgctaa aggcatatcg gcttgcattt gacgataatc tgtcgcattg
    23701 ctcgcttctg cacctgcaat ccaataccct ttgtctttca acacatccat cgtttgcgac
    23761 aagtttgtca cacgaatcac aggcacatgc tgaattgcac ctgttgacgc tttcgctact
    23821 gtttgcgtca agctaaccga acgacgttta ggaataataa tcccatccac acctgtcgca
    23881 tcagccgttc gtaaaataga acctaagttg tgtggatctt ctaacccatc taaaatcaac
    23941 acggtggaca agccttcttt ttgcgcttgt tctgctaaaa attgattcaa gtctgcatat
    24001 tcatatggtg caacgaatgc cgcaacacct tgatggggtg cattcgcaag ttgatctaat
    24061 tttgattttg ggaccgtttg gacaacgagt tttgatgatt tcgcagcttt taaaatttct
    24121 tcaatttgtt gcttcttaat cccttcttga attaagattt tattaatcgt atgtcctgat
    24181 atgactgctt ctctcactgc atgacgcccc acaataattt ccgagtccat ggatttcaac
    24241 gcctttcttc aacattttca acaatcactt ttaacaatgc ttctaatcgt tcttcttgat
    24301 gctctaaata taaaaagcca atgatcgctt ctaaaccaga actttttcga taggtctgga
    24361 catctgtgtt cttcgctttc gtataacttt tcgcatttcg tccacgcttc acaaccgcaa
    24421 gttcctcttc attgaaccaa tcttgcgcga ttaaatgttc tagcgtcact gcctggcttt
    24481 tagctgatac aaatcgttta gcctcttgat gcagacgatt cggtttactt tgaagcttta
    24541 aaataatata cgtacggaca tattgatcaa gcaccgcatc cccgacataa gcgagcgaca
    24601 gtgggttgag tagtttggca tttgtcggct tatccacgtt tatatctcac accttgtggc
    24661 gtatcttcta aaatgatgtt ttgggctttc aattgatcac gtatttcgtc agcacgtgca
    24721 taatcttttg cttgacgtgc agcgttacgt tcttcaatca gccgttcaat ctcttcgtcg
    24781 agtaaccctt ctacatggtt tgaagttaac ggcacaccta gcacatcact aaagatcgcg
    24841 aacacttctt taaaacgttg aatcacttgt gttgaagtat tgtcttctaa taaatattta
    24901 ttcgcgagct tcactaaatc gtaccaagct gtaatcgcat ttgctgtgtt gaagtcatcg
    24961 tccatcactg tctcaaactg cgtcaaaatc gcatcaattt gtgttaacat cgttgcgtca
    25021 tttgttaagt ccgtcgccac agtttcacgt tccgtcaatg cttgataact attgcgaata
    25081 cgttccaaac cacttctcgc tgcttcaaca agttctaaat tgtagttgat tggacttcga
    25141 taatgaacac taatcatgaa aaagcgtaat acatctgggt ccacttcttt aataatgtca
    25201 tggactaaaa tgaagtttcc taaagactta ctcatttttt cattatcaat attaataaaa
    25261 ccgttgtgca tccagtagtt cgcaaacgtc tcatggttat gcgcttctga ctgtgcaatc
    25321 tcgttttcgt gatgtgggaa ttgcaaatcg cttcccccag catgaatatc aatcgtaggg
    25381 ccgagctttt caaaggccat tactgaacat tcaatatgcc accccggacg gccttcaccg
    25441 aatggactct cccaactaat ttcacctggt ttcgcttttt tccatagtgt gaagtcgagt
    25501 gcatcttctt tgttttcgcc ttgctcgata cgtgcaccga ctttcaaatc atcaatcgac
    25561 tgatggctca acttaccata atcttcaaat tgacgcgttc tgaaataaac gtcgccacca
    25621 ctttcatatg cataaccttc atcaactaac tttttaataa atttaataat gtcatccata
    25681 tgatccatca cgcgcggatt cgacgtcgct tttttaacat tcagggcctc tgtatcttca
    25741 taaaaggctt gaatgtaacg ttccgcaatc tctggaactg tttcgcccaa ctcttgtgaa
    25801 cgtttaatca atttatcatc aacgtcagta aagtttgaga cgtaattcac ttcataacct
    25861 ttatattcaa aataacgacg gaccacgtca tagttaatcg ctggacgtgc gttcccaata
    25921 tggatgtaat tgtacacagt tgggccacac acatacattt tcacttttcc tggttcgata
    25981 ggctgaaaca cttctttttg acgtgttaat gtattatata atgtaatcat ctttaatctc
    26041 tccattttta gtttgttcaa gttgtcgttc tagttgtttg agttgctcat aaattggatc
    26101 tggcaagtta agatgatcga atgtcttacc gatacgtcta ccatcttgct tcacaatacg
    26161 tcctggaata cctaccaccg tagaataact tggaacatct tgaagcacga ccgaattagc
    26221 accgatatta acatttgaat gcaccttaat attacctaac actttagaac ctgctgcgat
    26281 aaggacgtta tcaccaatgt cgggatgacg cttccctttt tctttaccag ttccacctaa
    26341 cgtcacacct tgatatatcg tcacattgtc accaatagta catgtttcgc cgatgaccac
    26401 ccccatacca tggtcaataa ataaacggcg cccaatttta gcacctggat gaatttcaat
    26461 acctgtaaaa aatcgtgaag cttgagaaat cgctcttgca agtacataac gtttcttttg
    26521 atataagcgg tgtgcaatca aatgactcca aaccgcatgt aaacccgcat aagttgtaat
    26581 cacttctatc gttgagcgtg ctgctggatc ttgttcaaat accattttga catcatccat
    26641 catacgtcgg aacactttaa cccctccttc aaacagcatg acaatactta ttcttgtaaa
    26701 ctaactgaaa aacgactttc acggacaacc cactccttgg cttcattgtc ctccttaaaa
    26761 agtgtgatca gaattgaaaa aagcacctct aacatgtcat atgtcagagg tgcgatatgt
    26821 gcacggttcc actcttaatt agtacatgtt caaagcttaa actttgcatc catatactca
    26881 ctcaattggt tattcaattc tcatcctaaa ggtgcattca acaaattttg tggtgcactc
    26941 tcaccaaccg tacactctct gattcacacg ctgtttgctt acttgtcctt tattctattc
    27001 aaatccactt taatagtagt cgattttcaa agtgatatca agtacgaaaa tcgaacatac
    27061 ccttttttat aataaacttt gaatgcgacg aagcacttta tcttgcccta atacttccat
    27121 tgtgttcggt aattcaggtc catgcatttg gcctgttact gcaacacgga ttggcataaa
    27181 taattgcttt cctttaatgc ctgtttcttt ttggacttct ttgatgattt ttttaatctc
    27241 agccgcttca aagttttcta aagcttctaa cttaccgtat aatgctgtca tcaattgtgg
    27301 cacttgttca ccgttcaata cttcttgcga tgcttcgtcc aactcttttt catcgcggaa
    27361 gaacaactca gataacggta caatttcacc cgcatagctc atttgttctt gataaagcgc
    27421 aactaacttg cgaccccaat ctaactccgc ttctgatggt gactctggta ataagcctgc
    27481 tttgatcata tgcggcaatg tcatttcaaa tactgtttcc gcatcttttt ctttcatata
    27541 ttggttgtta atccactcta atttttgttt atcgaaaaat gctggtgatt ttgataaacg
    27601 cttttcagtg aagattttga tgaattcgtc tttagagaaa atctcttctt caccttctgg
    27661 agaccaccct aacaatgcga taaagttaaa taacgcttct ggtaaatagc ctaaatcgcg
    27721 atattgctcg ataaattgta aaatttgacc gtcacgttta cttaattttt tacgttgttc
    27781 attaacgatt aaagtcatat gcgcaaagcg tggtggttcc caaccaaatg tttcgtaaat
    27841 cattaattgt ttaggtgtgt tagaaatgtg gtcgtcacca cgaatgacgt cagaaatttc
    27901 catgtagtga tcgtccacgg ctactgcaaa gttatatgtt ggtacaccgt cttttttcac
    27961 gatgacccag tcgccgaagt tgtcagattc aaatgtgaca ggccctttca ccatatcatc
    28021 aaacgtatat gttttatttt gcggcacacg gaaacggatt gctggcttgc gtccttctgc
    28081 ttcaaactgc tgacgttctt cttcagtcaa gtgtgcatgt ttcccaccgt aacgcggcat
    28141 ttcaccacgt gcgatttgtt cttgacgttc tgcctctaat tcttcttcag tcatataaca
    28201 tttatacgct ttatcttctg ctaataactg ctcgactaaa ggttggtaaa tttcaccacg
    28261 ttctgattgg cgataaggtc catagccttt atctttgtct acagattcgt cccaatccaa
    28321 acctagccac ttcaaattat cgaactgtga tgattcaccg tccgctaagt tacgtttaga
    28381 atctgtatct tcaatacgaa tgacaaaatc accatcgtaa tgtttcgcga ataaatagtt
    28441 aaataatgcc gtacgtgcgt tcccaatatg caaatagcct gttggacttg gtgcatatct
    28501 tactctcact cggttactca tttcgttcac tcctgtttca ttgttcaatt gttatattat
    28561 agcatgtcat ccccatttat gcatatcaca gcttaggtta agttgttgcc gttaatgaca
    28621 caatcgcttg agcggcaatc ccttcttgac gccctgtaaa acctaacttt tcgctcgtcg
    28681 tcgctttcac attcacacgc ttaatatcga cagcaaaaag acctgcaatg attgcgcgca
    28741 tctcatcgat ataaggtcgg aatttcggtt tttccgcaat aatcgttgca tcaatattat
    28801 taatgacata accttctttt tgaacttctg cgtacgcttc tgttaataat tttttcgaat
    28861 ctgcatcttt aaattgtgga tccgtatctg gaaatagctt acctatatca cctaatgcac
    28921 atgcccctaa catcgcatct gtaatcgcat gtaacaagac atctgcatca ctatgccctt
    28981 tcaaaccatg cgtatgtggc acttcaatcc cgccaataat taaagggcgt gtcgcatcaa
    29041 atgcgtgcac atcgtatcct aatccaactc taaacatgat gatgtcgact ccttttttct
    29101 aaaattgctt ctgcatatgt taaatcttct tcagtcgtta atttaatatt atcataatcc
    29161 ccttcaacca tataaatgcg ttgaccgtaa gcttcaatta acgaggcgtc gtccgtcccc
    29221 atcatttgtt gcgtttttgc atggtcatag gctgaagcaa gcagttcaaa tgtcgcacct
    29281 tgaggcgtct gcacttgcca taaagtcgca cgatccaatg tttccgtcac aaattggtcg
    29341 gacacgcgtt taatcgtatc ttttgccttc acaccgacaa tcgccgcccc atatgttcga
    29401 atggcagccg ttacctcatg aatcgtgtca tgcgtgacaa acgggcgtgc cccatcatgc
    29461 acaaggacaa tgtcatcatt cgtgaactca acgttttgca gcacttgatg aatactatct
    29521 tgacgtgtct caccgccaac gactaaactt tttacttttg aaaatggtcc tgttaatacc
    29581 tcaagttgat cccgatctct ctcgtgtatc gccaaatgaa tgccttcaca ctgtacatcg
    29641 gattgaaaaa cggaaagcgt atgctctaac acacggcgcc ccgcaacttc aatgaacagt
    29701 ttattatacg gacgtcccat acgactgcct ttgcctgctg ctggtataat gacgtgataa
    29761 tttgacattt atgcttccac cttcttcgca aaaataattc gccctgatgc agtttgtaac
    29821 atactgatta cttcaagtgt aatggtttca ttcacgtatt gctttgcatc atccacgacc
    29881 accattgtgc cgtcatctaa ataaccgaca ccttggccag gctctttccc aacttttgta
    29941 atcatcaagt caaaacgatc gccttgatgc acctcaggtc gaatcgcatc agataggtca
    30001 ttgacattta acactttgat tccttggatg ctgcatactt tgttcaagtt ataatccgtt
    30061 gtaatcacgt gcgcgcgata atgttgcgct aaccttacaa ttaagtcgtc aatgtcttgg
    30121 tgtgtacgtt gcgggtgaat aatacgtgtc gggtgtttcg acagatgaat cgcacttaaa
    30181 atttctaaac cacggcgccc tttatcacgc ttaatactat cattcgcatc cgcgacgact
    30241 tgcaactcat taatgacacc ttgaggaatg agaatttcgc catcaataaa tcccgcttcc
    30301 ataattttta aaatacgacc atcaataatc gcactcgtat caataatttt cggcacagca
    30361 ttgcgggcat taatcgccat cgaacgcgcc atattttctg gtaaaaacaa cagcatttca
    30421 tcacgttttt tcagaccaaa ttgaaaaccg agataactta aacttaatgt aagtaggata
    30481 gggacgatac ggttaatcaa atccgtccca ataaactcaa gaataaagga aatcatgaca
    30541 gatatgagta gccccataaa caaaccaatc gttgcgaaga taatttcaat agcactatac
    30601 cccaacacaa attgctctaa atctttcatc gcatacgcaa tacgggggat aaaccaacca
    30661 aacaataaaa acatgatagc aacacccatg atcgacgtca cataactatt ctccatcatt
    30721 ggaggatgac tgacattaaa atcaatcatg acagcaggga ttaagagtat gcctaacaca
    30781 ctaccaataa taatataaga cacaatcact aataatttaa taaaatccac ctctatcatc
    30841 cctcctttct aattttttaa tgcgtatttc aatgcttcat tgacagaagt cacgccaatc
    30901 acttcaatac cttctgggaa gtgccatccg ccaatattgt ttttagggat aatcacacgt
    30961 ttaaagccca attttgctgc ttcttgcaca cgttgctcaa tgcgcgaaac acggcggacc
    31021 tcaccagtca atccaacctc gccaatataa caatcgaggc cgtctactgc ttggtcttta
    31081 aaactagaag ctgtcgcaat gacgatacct aagtcgacag caggttcaga gagtttgacg
    31141 cccccagcca ccttaatgta agcgtcttgt tgttgtaata aataaccttc ttttttctct
    31201 aacaccgcca ttaacaaact gaggcgatta tggtcaatac ctgtcgccat acgtctcgga
    31261 ttattgaacg tcgtcggtgt gacaagcgct tgtacttcaa ttaacaatgg tcgtgtccct
    31321 tccatcgttg cgacaattgt cgaacctgca acattggtcg tccgttcttc taaaaacatt
    31381 tctgacgggt taagcacgct ttttaaacct gactgtttca tttcaaaaat acccatttca
    31441 ttcgtagagc caaaacggtt tttcaccgct cttaaaatac gatacgcatg atgttcatca
    31501 ccttcaaaat aaagcaccgt atccaccata tgttcaagta aacgcggccc cgcgatttgg
    31561 ccttctttcg tcacatggcc tacaataaac gtcgcaacat tcatttgttt tgcgatgtgc
    31621 atcaagcttt gtgtactttc acgaacttga gatacagagc caggcgccga actgatttcg
    31681 ggatggtaga tcgtctgaat agagtccact acaattaaat caggttcgac ctttttcacc
    31741 gcttcatgaa taaccattaa gtccgtttcc gcaaacacgt taagttgact cgcatcttca
    31801 tccaaacgat ccgctctaat tttagtttga ttgagtgatt cctcaccagt aatatagagc
    31861 acccttttct ctttagataa agccgcgcac atttgaagta acaatgtgga cttccctatt
    31921 cctggatcgc caccaatcag cacgagtgac ccttctacaa taccgccacc gagcacacgg
    31981 tttaattcac cactattcgt ttggatacgt ggcgcaagct cttgtttaat gtcatcgagc
    32041 ttttgtattt ttgctgaact tgttttttgc gcccgtacac cgtgtttagg actcgcagtt
    32101 ttttgttcaa aagattcctc cattgaattc caagcaccac aatttggaca tttccccatc
    32161 catttaggcg attgataacc acaggccgta cattcaaaaa ttgtttttgt ttttgccact
    32221 cagacacctc catctcgtca tataacatat ctattttata cttgaaaaat gtttctgaca
    32281 aatgttgccc tttatcattt aaacgcttta aatatccgtt ctcatcgaaa cacactatcc
    32341 aattataaat aatatacagc aaatacttaa aaatgtagcc tgtacaacac aaaacaggaa
    32401 atagaaagct caaataacca gctctatcat cagtaaaata cactacaacg cacttgacgc
    32461 actaaagcca aagacaaaga caaagacaaa agacgattac aactgacata gcaaaggcta
    32521 taacccattt gtaaccgtcc cttttttgtt tctattttaa atacagcgta ggtccattgc
    32581 agtcaatcgc atgacttgtg ccattgaata aaatagttta tttatttttg ccattcacct
    32641 tcgatagcac taaaaagatg atgaagaaaa gtatcgcata acctattaaa tataaaacgt
    32701 cctcaatatg gatacgccct tcacttaaaa tgctccatcc aatatgcccg taacgatatg
    32761 aaggtaatat ctcagcaaaa gcttgcatat gtttcggcat cgcatcgaca ggaatccata
    32821 gcccccctaa aaaagacaaa agtaaataaa caatggtacc tatcggctgc gcggctgaac
    32881 cgagttggcc aatgattaaa gctaaaaata aaaatgcaaa actgaaaaca ttcaacaata
    32941 tcacaatttc taccagttta tagaaggcga tatgaatgtc attataaaaa taacctaaca
    33001 aaatcattgc gacggaaaag atgaaagata taagaaagta tgagaataag taactcatca
    33061 tataggcatt cggattaatg acagacactt taagatatgc ataccagtta tcattttttt
    33121 catttgctac ctttgttcca agtaaattaa tcgcgtttcc cattatacca aagcagatca
    33181 gagaaatgag tgagtattcc ttccaactga taccattgac tgctgcattt tgtggaaaaa
    33241 tctcagaata tataacatag aaaaacattg gcaatgcgat aattaataaa acatacttaa
    33301 aatccctaaa tattcttcgc gtattgagtt gagttaagta tagaaatgat ttagcctttt
    33361 tcatataaaa ctttctcctt aaaaattttc ttcaacttgt cacctttatg gtcaaaggta
    33421 ttgaataaaa cttctacctg ctcattcaac actattttac ctttatggag aatcacgatt
    33481 cttgtagcga aggcggctat ttcttctaaa tcgtgactaa tcaacaacac actcatcttt
    33541 tcttcttcga ctttcgagcg aacgtgttcc caaaataact ctttagaagc aacgtccatg
    33601 cctgtcgttg gttcatcaag cactaaaaac tgagggcaat tcactagagc tgctgcatat
    33661 tgtagtcttc ttttttgtcc ccctgataag cgcgtgcaat attgattttt ttccttcact
    33721 aaatcgactt cttttagtat gtcatctgta tcttgttgat gctctgagta actttttaaa
    33781 agctctaacc attctttcac tttcattttt tcaggcattg ccacttcttg taacacaaca
    33841 ccacattgtt gtttgaaatc gatatttttt atcaccttac ctgaattttg tttgagtaga
    33901 cctagcacta ttttaatcag tgtggatttt ccctggccat tcaaccctaa aagacctaca
    33961 atttcacctt gattgaccga caagtcaaca gcatccagca ctttgttttt accaaaagtt
    34021 ttactcacat cattaatttc aaatatattg cccatattat tcaaactcct taacggatta
    34081 tcttttgaat catttgttgc gtaatccgaa tagcttcttc attaactgga gggatagaat
    34141 tcattaaaaa tttaggggaa agataaatca ctgaaagatt ttctttatac gtataagcct
    34201 gttctccgtt attgatatct attgattcat gaatatcgta tgcatctaac attttttcaa
    34261 tgtctaaatt aaaatcccgt ttcacgtctt ctgtaaagga aataagtaga aacaattcaa
    34321 tctgctttct actgtacata ggaaatacaa tactataata tatcccttcg cttcttaagt
    34381 tcgccatttt cttattgatg aatccgatta atttttgaat gtaaaaaata gttgatgctt
    34441 cttggataga atgaactggg atattaatat acttgaagaa aaactcgact ttgttgtgtg
    34501 atagcgttcc acttttcgct gtcatcggtt gtgtcacctt ttctatcact tcatctttta
    34561 aaaaaacatg atgagccact tcattacata tgtcattatt gatgaagatg aacgagaaag
    34621 tatccagcgt gttttgaagt agtccgttat aatattccaa atcttgattc actattgcat
    34681 cttgtttcag acctctcatc ttgttcataa tatttttgat ttctttgttt tcaagtgcac
    34741 gctcttgttt aatttcactc aaagctctgt tgaattcttg ctgattaaat tcatataaat
    34801 atggagcggg tttaaaaagc tcaatatcaa agtcatcttt caaagtgatt ttgatgtaat
    34861 cttctgtcgc atgtgcacct aaaatatgaa aaccgtcatc ctttactctt gccgttaaaa
    34921 tgtgctcgag tacatgtgca aagtcactgt tcattttttc atagggtcta aggaataatg
    34981 aaatttcttg taatggcgtt tctcttttaa aatatatcat ttccttcatc ataaaaccgc
    35041 ctctctatct ttagttataa atacacagtc aacgatactt tcatgattac catcaatttt
    35101 taacatttct tctactttaa agtcgtcagt cccccctata gaggtactca ctaaattgta
    35161 atgggttgcc ataagtgaaa tattttgagc cacagcgcct gcttctagca aaatatatct
    35221 gtatgccctg tcgtcatact taaaagtagc ccttgaaaaa acagctgtaa taaaaaatat
    35281 aatagaagga tgttccatgt tttgatatct cataatatat tgggagatat caaaaacatg
    35341 cgcgccattg tctaacagac tgagagtatg cgtcgaagga ttgtaatggt agagtccttt
    35401 tttaaaattt tcgtaatcat taaaaacaat gccatatatt tctaacggat ataaagcgcc
    35461 cgctgaaggg acaacccgtt tattttgact attctttcca taagctgccc aaaacaaatc
    35521 tgaaaggaca tttaaatcga taaaagcatc tttatccgga ctatgaactt gagatcttct
    35581 cttatctagg tattctgtta gcaaaccaga tgaatgtgca ttcaatttga aatgttgttg
    35641 tgttggaaaa tagcgttccg gactttgtgt cgctttaaga aaattcggac tatttaataa
    35701 aactctagat tgatacatat tgctcattaa atatcttttg ctatgcttcg tattttgatg
    35761 atatgtttga ctcaatacac attttgaact taatcgagtc gcataatcat tactgatcat
    35821 tatagatttg aaatgttcca tggcatactc ctttaaaatg ttatgggaaa ggatgtggga
    35881 caatcggttg actatttttt aactcattag gctgcctttt cttcatttta attagattcc
    35941 tatcgacttc attaaggcgg ctactttcta gatgtttaat aaaatgtggc tctatatcaa
    36001 gcattccagg gataatcgtt ttccctactt tccaatccgt atgttttatc tcttcagaag
    36061 tcacatctac aaaatacacc tgcttatcaa tagactttat tttttctata aataaagcta
    36121 ccgcctcatc gtcatctggt tgtatctcgt tttcaggaat ccgaaaaatg tgctgatggc
    36181 catcaagaaa cgacaaatgt tgcgacatac gatcattgaa atataaaaga gaatggtcct
    36241 gatattcttt cacttcatca taactatgaa cctcaatatt ttcatcgact ttaaaaataa
    36301 ttgccgcata cccaacaata ctttgtgcta attctagtaa agttttttta cacgcctcaa
    36361 tccatgtagg tctcacactc gcggcgacaa cacacccttt gttgggaaga atagccactc
    36421 caaaaacagc gggcacatcc caatccatat ccattttata taacttaaat tgaatatttt
    36481 cagatttgat ataacgatta aaataacttc ttaattctct gttatcattg atacgaattt
    36541 gctcacaagc aatttgtctt ctccaaatat actggaaagc atctctttca aatatttctg
    36601 caataccttt ccaaaaacat gctttgagat tcggtccaca cgcagcgcca gttgctgtcg
    36661 tcatccaact ttgcttctta ttacttctat aagtgagata cactgcatct acagggagtg
    36721 cgacggttct tttttgaatc aagtcataac catgaatcca ctggtaatca tcaaggttcg
    36781 cacttgcaga cgcattgatt ttttgtggat tgatttttac taccccttta cttactttca
    36841 tgacacgatg aggatgcaaa caagaatagc gttcgatgta ctctcctaca gccgaattta
    36901 cagcctgtgc ttctgtaata ccggcaccac tcgcattaaa tcctgcagta ttatactgac
    36961 ccccaaaggc cattttcaca taaactttag gtagtccata atatgtcggc aaatcatata
    37021 tatttttaat aataccgtat ttttcgtcca caaagttttg ggcctttaat ttcactgtca
    37081 taatctcacc tcaaaaactt gtgtattcac tgattctggg aagcacaatt cacagttggg
    37141 gtgtttgaat aaattgtgcg tgcgccatcc ttcatttaat aaagaataag cgtacactgt
    37201 ttggatcagt tcattttcaa cactcaagtc attcatttgc attgcttctt ttaacatttg
    37261 tactgccaca aaactcaatg ccagttgaat gatttcttct ggtacgtatt ctttactttc
    37321 gtgagatgaa tcattgaata gcgaaaaaac ttcgccatat acattatttt cagtttctcg
    37381 taaccgctta caattcaaac aactcgtttc tttgggtatc gtataagtga cctcgaaaga
    37441 aacattatca aaaatgacac tattatatgg tacgccattg ttaaacatca tttcattaca
    37501 ttttgtaatt ctttttctat taaattttct cagtatgatt aatccgatat cataatcatc
    37561 cgttacttct tcatttaaat tcactacatt ttgagaaggt gattttcgaa tatacagttc
    37621 gactaaatca tcgtctccac atatacctat gacatgattt tcaaacgctt tatgctccat
    37681 ttttaatcca atcatctgca aaaaggatgc tgtattggcg acatcttcaa atgcatgaat
    37741 tgttttgagg aattcaatta tttttttctt caccacatct tgttcctcac aatgcaaatg
    37801 accttcttgg atttcattcc atattttaat aaaagactct tgagagatac cacttaattc
    37861 aaaaatctgc tcgtcacttt ttatgtatat acttttatct ttaaaaacgt aatcgatgtt
    37921 tgttttcatg atgtgctctc ctctcatttt caaaaaagga attgaagcta tggttaactt
    37981 caattccttt aaaacatata ctttaacaac aacagcagca agggcaacaa caaagtgtta
    38041 ttgtccagtt catttgttcg cttgataaaa agtcttcagt gttcaatttt ttgatttgta
    38101 attcgttggc taacattgta accacccctt ttcaaatttt aaaaaacaaa aaggaaactg
    38161 tataacaatc caataatcaa agcgcctaaa acaataaata gttttttatt ctctttaaaa
    38221 aaca
//
LOCUS       DANHPA010000009        35786 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.009, whole genome shotgun sequence.
ACCESSION   DANHPA010000009 DANHPA010000000
VERSION     DANHPA010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 35786)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35786)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35786
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.009"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..1149
                     /locus_tag="PTC28_000387"
     CDS             <1..1149
                     /locus_tag="PTC28_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HDK5715706.1"
                     /translation="KIYNPMRLVKNDTILFESFGGKNYSDSPKYIYEYMKNAYPNLKY
                     YWIFNDISNPELPNDIQKIQKGSSDYYKIFKKARVWVSNSRLPLYLEKKPNQTYIQTW
                     HGTPLKRLANDMKQVRLPETTTELYKRNFYAATRRWDYLISPNPYSTEIFQSAFWMAP
                     NKILETGYPRNDILVNHANDTILLQSIKEELNIPKDKKVLLYAPTWRDDEYKEAGHYT
                     FDLPFDLQQFYEQFGDTHVILLRMHYFISNQLSLKDYEDFAIDVSNYNDISRLYLISD
                     CLITDYSSVMFDYGILKRPQLFFPYDIEKYATELRGFYIDYHNDLPGPIYTDPDALIE
                     GLKNIELIRETYQDQIEAFHQRFCSMENGRAAQYIGDMIYNEIQKSSD"
     gene            complement(1723..2412)
                     /locus_tag="PTC28_000388"
     CDS             complement(1723..2412)
                     /locus_tag="PTC28_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDK5715707.1"
                     /translation="MIKLEHITVQYKEVTALDDVSLAVGPHEIVGIVGESGSGKSTLA
                     HVMLGELRAQRGQVTSTFQRVLPILQHASYAFNPKMTIARALNEALAYEASQRQAHQH
                     YRDELMASMGLSHELMKRYPNALSGGQLQRFNVIRTLMLQPDLLICDEITANLDVIAE
                     HRMAQQLKRHVERTHCAMVVISHDLAFLQKWVSRIVVMYQGRVVDAFPIEALFDEARD
                     DYTKALLSIYE"
     gene            complement(2405..3181)
                     /locus_tag="PTC28_000389"
     CDS             complement(2405..3181)
                     /locus_tag="PTC28_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5715708.1"
                     /translation="MNKLLNLNNLTVRQGERHVIKSLDMTLYASKVNVLIGESGAGKS
                     ILIKALLGALPEHFEMTYDEWHYQGQRVTSLKPYLGKQVGYISQDYTHSFNDHTPIGK
                     QLIGIYRQHYKVSRQEAAHQVQKALQWVGLDHLDLRKRYRFMLSGGQLERVLIASVMM
                     LEPTLIIADEPTAALDAVTGQQIMTLLHHLAEAHDVTLWVVTHNLTHVKRFSDYLYVL
                     QHGRIVDHGDDIYFKSANIHPYSALLFEHRSQLKQGESYD"
     gene            complement(3174..3998)
                     /locus_tag="PTC28_000390"
     CDS             complement(3174..3998)
                     /locus_tag="PTC28_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5715709.1"
                     /translation="MMKQLRQLPKMVWVCALYVVVLIIAQFSVSTQAALEVKLSDQFL
                     SISSMHWLGTDDYGRDLFARLIIGARYTLLVSLVTIVMTVVIGVPIGMIAGFLKGKVE
                     KTIMRIVDIGLSIPEFVLIIAMASLLKPSIWNIVWAMVLLRWMTYTRLTRTIVASIRH
                     MDYIRMAKLYRVPTYRMMLHHFVPHVLPSILVVATVDFGKNILYISSLSFLGLGAQPP
                     SPEWGAMLNAGRDFMTSNPILLFAPAVMIAVTILIFQLTGDALRDHFTQEEHRGHE"
     gene            complement(3995..4981)
                     /locus_tag="PTC28_000391"
     CDS             complement(3995..4981)
                     /locus_tag="PTC28_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5715710.1"
                     /translation="MQIKRFVRAFVKMIIILWVLSTITFILMKSTPGDPVNQILHVGE
                     SNISQSTIEATRAQYGLNDAWFVQYFRWIGQIVQFDFGTSYQTGRPVLQEIVFYAPPT
                     ITIAFFTIIMVMVTALPLGVVAARHPNGKLDRIIRAVTSVTVSIPSFFLGIILLHIFA
                     LHFKILPVSGFGSPAQLVLPVIAMSIGMSAYYVRLMRANVMDLYRSREVTASRLRGLS
                     ERYIFMTDILKPALVPVVTILGLSIGSLIGGTVVIENVFGIPGIGRFLVDSIRARDYP
                     VIQGIVLMLGIIVVLSNLMSDTIVLFLDPKQRYLKTDKGDAHMSTSTYEVSQ"
     gene            complement(4971..6467)
                     /locus_tag="PTC28_000392"
     CDS             complement(4971..6467)
                     /locus_tag="PTC28_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDK5715711.1"
                     /translation="MKLKYSLAVLTTTSLLLASCGTESGDRNADEKVLDIEMPLKTTS
                     IAPYETDVPVRAGALESLFKVSKEGEVQPWLAKDFKQVSSEKLELTVKDDVKFQNGEK
                     LTGQKVKESLEQALKESDFVKSTLPIKSIEAVGQKVTITTKEAYPELASELANPYVAI
                     FDADAKTDIDAKPVGTGPYQIKDYQRAQKITLDRNDNYWHGKPKLDGVTVTYQEDGNA
                     RVSHLQSGEADLITDVPVNRVKQLEDKGDTKVSHVSGYRTQMVIYNLHSDKMTHDVRE
                     AMDKIIDRKGLAKDVSNGYAKPATGPFNDNLDFIDNHKVKKQDIEGAKKLMEDAGYSD
                     AHPLKIQLATYEGRPELPKMAQVIQSDAKKAHIDIEIRNVDDIEGYLEDRSQWDATMY
                     SFGTIPRGDTGYFFNQAFHEDGSSNKGAYKNKEVTEMIDTLNHTVDKAQRESLSNDII
                     DKAAQDIPASYITYNDTVDGMNKDVTHFKATPEGIYLVDDKVDIQDAN"
     gene            complement(6571..7299)
                     /locus_tag="PTC28_000393"
     CDS             complement(6571..7299)
                     /locus_tag="PTC28_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HDK5715712.1"
                     /translation="MIQAEHILEKMKNQKINYDKVLRKMIVNWERENERPSILLHSCC
                     APCSTYTLEFLTEYADVSIYFANPNIHPKNEYLRRARVQEQFVHDFNERTGNNVRYIE
                     APYEPHEFMKMAKSRGLTEEPEGGARCSACFGMRLEMVAEAAVELGYDYFGSAITLSP
                     KKNAQLINEIGLDVQQLYDVKYLPSDFKKNKGYERSITMCQDYDIFRQCYCGCVFAAQ
                     QQGIDFKTINQQAKLFLEHLENKN"
     gene            complement(7486..8115)
                     /locus_tag="PTC28_000394"
     CDS             complement(7486..8115)
                     /locus_tag="PTC28_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDK5715713.1"
                     /translation="MEFMDVFEKWAERYDETVFNTGNDNEYEDVFDGYTAMLEGVVAL
                     SSGRVLEIGAGTGNLTQRLIHQEFDVTAIDPSEDMRMIANQKEDIHVLDGHFLNIPVD
                     AHFDTIVSTFAFHHLDHVSKRETLTYLKSFLIDEGQVILVDTLFESEADKARMIETYR
                     DKGYVNLVEDLETEYYPFKDELTSIVEAVGGKAEFERLNTFAWRVRITF"
     gene            complement(8501..11335)
                     /locus_tag="PTC28_000395"
     CDS             complement(8501..11335)
                     /locus_tag="PTC28_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhgE/Pip domain-containing protein"
                     /protein_id="HDK5715714.1"
                     /translation="MKNAIKLFLTDIKKLAKTPGAMVLILGLAILPSFYAWFNLEATW
                     DPYSNTDGIKIAVVNEDKGDTVRNKKINVGNQIEETLRKDDHFDWQMVSREKADRELK
                     MGKYYAAIYIPEKFTHQVTGIVRKDPQQAEVEYKVNQKLNAIAPKMTDAGSSEIVRNA
                     NKKFNETVTKALLDEANRIGIKLEDQLPNYHKVRDGIYAANNALPKIEKFRKTLIYLD
                     ENQDQIDQYADKFRALDQYKDDAVTATERLNQLNASIPAINERAKLIVSLNQAMPDIE
                     RVLQVASGVPNHFPEINDGVDRAIAGTDQALVKLNEIQQLLPAVEQRVNVLQNGVDRG
                     RVVNQAVGENARNATTTTPQSTRGTAYHTAAMSTTTQGDSTNVPAGHIISPADAQTMT
                     TAYGDTLQQVNQAVTQQLKATSADLDTAENLSYGILSAKDPKQFESPLNHLIARMNNA
                     TKTIRDYRDYLANIEKSEGVDLSDAQSRLKTVQEDIEQRTKRLNALKDAISAGNSGQA
                     EAADVLDSLSKAKDHLNAVGKYLRGDFTQTLRDISDRLGAALNQGATTLDNVQQRLNQ
                     LNSAIRQGQQFLTEGQQRLHQLSDTLPRVEAAYINAMKAAQAYFPQFRQKVAEASNFV
                     ENDLPRVEGRVSDATATVNEKLPEAFAQYDRLRNILDTNQPKAKETLHRLAEFARNDL
                     PQVEEDLQKADGIFKQLDKENTIEDLIDLLRNDLKKQAGVIASPVDLQKENVFPVKDY
                     GSASTPFYTALAIWVGALLLVSLLSVHNKHPELKPYLTIRETYLGKMGLFLLMNIIQA
                     TIVSIGDIVILKASIESVPLFIAISMYSALIFTTIVYTLVSVLGNPGKALAIVLLVLQ
                     IAGGGGTFPIEVTPQFFQSIHPFLPFSYSIDALREAVGGPVPQILTYKLTMLTVFGVG
                     FFLVGLIGKPYLDPLAQGLAEKAEKSDVLE"
     gene            11664..13739
                     /locus_tag="PTC28_000396"
     CDS             11664..13739
                     /locus_tag="PTC28_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase domain-containing protein"
                     /protein_id="HDK5715715.1"
                     /translation="MNKKFIYTGLLSTALLIPSVTPQWAVAATPQTENGPKNPKVDNH
                     DQDVASDETRDDRKKQSQSSDKKETTKRESSKTSEKTTSQQHDSKKADLFDITSPLDS
                     QLKSSLSPHTDWFGQLFHSTLNETTDAPQHTYPAPTNDATSMPKQAQSSTPENRDFFE
                     QLQAILSGGEDSKNDTTTSTDDALSSDQATTASPSTEQRDNDQENVTPSHNTDTSNEQ
                     PSTEDATTSEKSKATSEGTSEVPPVNDDSTTEKPSTTVDAPDTEDKQTENHAPSTRDD
                     ATSDQQTKKNQNDAVIDALLDEYSEKAEQTHHAYQQQKEANEPSSTSKSQKHEAQVSD
                     PDTFKSSREQAPKQSYQNEADRKQTRQTTLFETMPDSDTSTNDAGTMRVVPQSSTREF
                     INDIAKDAHDIGQQEDLYASIMIAQAILESDSGRSELSRDPYFNLFGIKGSYHGESAH
                     FKTLESDGKQLYEIDAAFRKYPDHKASLQDYADLIKGGIDGNPNIYEDVWKSHSSSYH
                     DAASALVGTYATDPQYDQKLEALIEAYDLTRFDQDDMPDLLAEKDDNETAKSDGGAFK
                     PFAISADSPYPYGQCTWYVYNRMAQFDIHISGTMGNAADWTYSALTQGYSVSSKPKVH
                     SAVVFNPNELGADRYYGHVAFVEKVNRDGSIVVSESNVRGLGVISFRTIDAKDAAQLD
                     YISGDLATE"
     gene            complement(14332..16191)
                     /locus_tag="PTC28_000397"
     CDS             complement(14332..16191)
                     /locus_tag="PTC28_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall anchor protein"
                     /protein_id="HDK5715716.1"
                     /translation="MTERKSPSSQNMRHRLVKAGTVLLLVGSGLQMPSTLSHEMTAIA
                     QTDATDDLKTLRENADKKVKALQYLNTDYKNEFLALIREYDTSSKNIEVVVDEAEAAN
                     RLAHDAQSDDEIQPELDAIDEKISALKAKVDEGQRESTEARQDVTSTETKSAESEGRE
                     PSTKGESKVKESSSAQTIVAPHHGQQDVSALKDHIKNDVDTLKQDYATQNKQVTPLQG
                     IDSAITRIDHFVSESVDHKSDNYFEEKRQHLQNFEQDIKKRTDISGTEKATLLDDAKT
                     VANQLNAQNDTILTELQQHDDKRAAVESILGEIFNAQEAAERAKQIDVKGKTDQQLAN
                     EIHQQADGLIKTSSDDLLLGMLENNSNTQGLVESILRTRFDKQEAHKIAGEIMQGKPS
                     NTAILDRLKDHFKANGKASGDDILNALINNTDADAEVIESILGGRLNAENAKLIADRV
                     QKDKKKTHQNLKAIEDELSAQANRLLTLRKQLQQIRHNTQTDMNDLFAPLRRIANILG
                     GGLNRDDIHSSGRTNDKLQQLLNRDHSLLGRGGDLFKHDFAPKPNIDPYQAINSQTAS
                     EGFLDGLFDQNGDFNLPNTGEIVKRTWLPLGILVVAIGVLILTVRFHKKTRKQ"
     gene            complement(16328..18250)
                     /locus_tag="PTC28_000398"
     CDS             complement(16328..18250)
                     /locus_tag="PTC28_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDK5715717.1"
                     /translation="MKILAVTSCPNGIAHTYMAQEKLEQAAASLGIDIKVETQGGVGT
                     ENVLTAEEIAAAEGIIIAADRQVDLSRFNGKPLLKESVRAGIHQPEALIQRVVQGEVP
                     VYHSTGQAEASETSSHQSENNKNGMQMVYQHLMNGVSFMVPFIVVGGLLIALALSLGG
                     EKTATQGLVIPDDSFWKPFEKIGALAFSFMVPILAGYIAVSIADKPGLVPGMIGGAIA
                     ADGSFYGSTAGAGFLGGIVAGFLAGYIAKWIKNVKVPKAMAPIMPIIIIPIIASVLVG
                     MIFIFILGAPIAAVFESLTTWLKGMQGANIVILALIIGAMIAFDMGGPVNKVAFLFGS
                     ALIAEGNYSVMGMVAVAVCTPPIGLGLATFIQKRKFNRNEIEMGKASFTMGLFGITEG
                     AIPFAAQDPLRIIPANMIGAMVASVIAALGHVGDRVAHGGPIVAVLGGIDGVLMFIVA
                     VLAGSFVTTALVLTFKKQPTATQAISRTSISTVKANDDTDVEDMLNPQAMIQTATPMD
                     RDKAIDTIINRLVRENYVANAAVLKEAVLAREAESTTALGMHIAMPHAKTNAIRQPII
                     GVLKHDQGVQWESLDGTLPQLVFLIAVPEQSHDTHLKVLQQLSKNLMHDDKRQRLLDT
                     TNEAELYKTLQRIIKA"
     gene            complement(18437..19159)
                     /locus_tag="PTC28_000399"
     CDS             complement(18437..19159)
                     /locus_tag="PTC28_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDK5715718.1"
                     /translation="MSHYSTGELANMFGLTKRTIQYYDLQHILKPAYIDDNQYRMYTE
                     HEVEQLRLILVMKSLGLTLKEIKQMLSVDGTLQTVRTLVTRKVEETEAEIRQQQQQLK
                     QMKQMQQMILDSSRAPVKNLSDIEDAMKQKPQHQRLVKHMFLMGTTATLFEVIGIGLS
                     WKYRQLWPAVLGFGSAITVAQKMTHTYYQQVSYMCPNCQQQFKPPYRTWLFAPHTSQT
                     RLLTCPNCGFKGYCTEIYDTTN"
     gene            complement(19189..20154)
                     /locus_tag="PTC28_000400"
     CDS             complement(19189..20154)
                     /locus_tag="PTC28_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDK5715719.1"
                     /translation="MKTYVEQDGRTIQKHYLTLNGHRQGIIIESRGTDKPILLVVHGG
                     PGFPLYSFFRAHHIDLTDRYTVVFWDQRGTGMSYTRETVEMADLISDSYQLIQFLRRH
                     FQQEQVYLMCHSFGTIIGTHLAHRYPEYIAAYIGMGQLGDVFGNEQCILQHLIFLAHE
                     ERNQRAIQQLKAIHLTRDFNQDCQYEKARQRYTARYHVGFSSHGYSVWRMFRVMMQTP
                     YYRLIERINIVRGSLSTFEHLTSEMAHTNLNDIAQEIKVPFYVLQGVHDMQTTYEDSK
                     AFFEHVGSAEKRFYAFQDTAHAPFVDEPEKMIEIMHEIVDRHVTS"
     gene            complement(20300..20629)
                     /locus_tag="PTC28_000401"
     CDS             complement(20300..20629)
                     /locus_tag="PTC28_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HDK5715720.1"
                     /translation="MFMAENKLTLQKGTAEATMERFHRRQGIETIDGFIEMYVTQTNG
                     LKEYDEVKILTVWQSEDAFREWLGSDVFKASHKNVRQHHEEKESPILKNKVSTYQIGY
                     HYEKAHA"
     gene            complement(20796..21101)
                     /locus_tag="PTC28_000402"
     CDS             complement(20796..21101)
                     /locus_tag="PTC28_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715721.1"
                     /translation="MIISLAVFGFVFLLVLVIHIFKLDAVIANIDFEQIDERYRDTVR
                     RRWFVWTEMMVIVLGIWTTIFTFYYKNIPLFIAGIVCFFILNLVRLNYLIKKFKKRK"
     gene            complement(21233..22621)
                     /locus_tag="PTC28_000403"
     CDS             complement(21233..22621)
                     /locus_tag="PTC28_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HDK5715722.1"
                     /translation="MTKFDVENPSTGEVIKTYAFTEEAEIHHKIERAYEAYLSWREVD
                     AHERSRLLWQWSTLIKENREALAELITLEGGKPYQEALGEVDYAVGYVDWYAEEVKRI
                     YGRTIPANSPDKKILVDKFPVGVVGAITPWNFPAAMITRKMAPALAAGCTIVCKPATQ
                     TPMTTIRLVELAHEAGIPEDAISYILASGKTAGKIFTEHELINKVTFTGSTPVGKKLI
                     EQSAASVKNVTMELGGLAPLIVHKDADIEHAVEQTIKTKFRNAGQTCICANRIYVHED
                     IAEEYEKQLIEQVHALKVGDGMEKDVKIGPLINQKGVDKVLDHIQDAVEHGGQLSREL
                     EDIQALGGNFLKPVVITNVNHDMKCMHEETFGPVAPVMRFADIDEAIHLANDTEFGLA
                     SYFFTNDYRTGLYIYNNLHYGVVGWNDGAPSAPHAPFGGVKESGYGREGGIEGIEPYL
                     ETKYLSIGTKTE"
     gene            22774..23124
                     /locus_tag="PTC28_000404"
     CDS             22774..23124
                     /locus_tag="PTC28_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HDK5715723.1"
                     /translation="MTTAIPNCPQCDSEYTYEDGGLYICPMCAYEWTNDTLEAAAEQA
                     VIRDANGNPLQDGDTVSVIRDLKIKGSSQMIKQGTKVKNIKLVDPEDGHDIDCKIPGF
                     GQIGLKSEVVKKIK"
     gene            complement(23191..23550)
                     /locus_tag="PTC28_000405"
     CDS             complement(23191..23550)
                     /locus_tag="PTC28_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase
                     phosphotransferase subunit DhaM"
                     /protein_id="HDK5715724.1"
                     /translation="MTQIVLVSHSDKIAEGTQELLAQMAQDVNVVAIGGIEGEIGTSF
                     DDISAVLNDINDDAICFFDIGSSEMNLDMAIEMYTGTHRIEKVDAPIVEGSFIAAVAL
                     STGQTIDEAIASVDEAF"
     gene            complement(23547..24128)
                     /gene="dhaL"
                     /locus_tag="PTC28_000406"
     CDS             complement(23547..24128)
                     /gene="dhaL"
                     /locus_tag="PTC28_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit L"
                     /protein_id="HDK5715725.1"
                     /translation="MDVATLKERLLALKETFETEEEALTELDRAIGDGDHGVNMRRGF
                     EALPDQLDDSSMQALFKTTGMTLMSKVGGASGPLYGFSFVKMAQVANDEIDHDNLVEL
                     LKAFEEAVAQRGKVTLNEKTMYDVIARAREAVEQGETVDLATLQSYADATRDIEATKG
                     RASYFKKDSIGYIDPGAQSSVYILNALIGADEA"
     gene            complement(24151..25113)
                     /gene="dhaK"
                     /locus_tag="PTC28_000407"
     CDS             complement(24151..25113)
                     /gene="dhaK"
                     /locus_tag="PTC28_000407"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020361079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HDK5715726.1"
                     /translation="MKKLIQDKTHFLQDMLDGLKITNPNIDVIADTVVVRQHKKTSGV
                     ALVSGGGSGHEPAHAGYVGEGMLDAAVCGEVFTSPTPDKVLEAIKAVDNGDGVLLIVK
                     NYAGDVMNFEMAKDMAAMEDIQVEMVVVGDDIAIDDVEKRRGVAGTVFVHKYAGYLSE
                     RGKKLTELKTEVEALIDQIRTIGMALTPPAVPTTGKYGFDIEESEMEIGIGIHGERGL
                     ERVPVEPVEQIVQRLIEQLKAEVTSDELIVMVNGMGGTPLSELDIVTKYVALQLEQEG
                     KTVKGWFVGDYMTSLDMQGFSLTFVPYDEHILSAFRAPTTSRFF"
     gene            complement(25280..25981)
                     /gene="lrgB"
                     /locus_tag="PTC28_000408"
     CDS             complement(25280..25981)
                     /gene="lrgB"
                     /locus_tag="PTC28_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antiholin-like protein LrgB"
                     /protein_id="HDK5715727.1"
                     /translation="MVNHLAIDTPYFGILLSVIPFLIATVLFKKTNGFFLFAPLFVAM
                     VFGVAFLHFTGIPYEKYKIGGDIINFFLGPATISFAIPLYKKRDVLVKHWHRIIGGIG
                     IGTVLALVGIFFVAKALQFGSDIIASMLPQAATTAIALPVSEGIGGIKELTSLAVILN
                     AVIIYALGNKLLKWFHIDDPIARGLSLGTSGHTLGVAAAKELGPVEESMASIAIVLVG
                     VVVVAVVPILTLIFF"
     gene            complement(25974..26408)
                     /gene="lrgA"
                     /locus_tag="PTC28_000409"
     CDS             complement(25974..26408)
                     /gene="lrgA"
                     /locus_tag="PTC28_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antiholin-like murein hydrolase modulator LrgA"
                     /protein_id="HDK5715728.1"
                     /translation="MKQKEEKTYSFLHQVLVIASVLFVSSIIESFMPIPMPASVIGLV
                     LLFVLLCTGVIKLGQVEKVGTALTNNIGFLFVPAGISVVNSLDIISASPILIIGLIII
                     STILLLVFTGFASQILMRMTTKDKVATPPRTKAKVKGAHSHG"
     gene            complement(27208..27942)
                     /locus_tag="PTC28_000410"
     CDS             complement(27208..27942)
                     /locus_tag="PTC28_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor LytR"
                     /protein_id="HDK5715729.1"
                     /translation="MRALIVDDEPLARNELIYLLNRIGGFDVLDEAENVSETIEALLV
                     NEYDLVFLDINLMNENGIELGKKIQKMKAPPAIVFATAHDQFAVQAFELNATDYIMKP
                     FDQSRIAQAVAKVRAQQEKYEDMHVPHSAVKVTQPLPIEIGERIHMLNPVDVIGISVN
                     QGVTTIYTTQGEYETHEPLSAYEKRLDEAQFIRIHRSNVINRQHIEAIEHWFNSTYMV
                     TLTDGVKMQVSRSYMKKFKQAMGLKL"
     gene            complement(27946..29697)
                     /locus_tag="PTC28_000411"
     CDS             complement(27946..29697)
                     /locus_tag="PTC28_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014373763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDK5715730.1"
                     /translation="MFNLTILLLERVGLIIILAYILMNSKYFKHTMQQRQAWASKWQL
                     CIVFSLFALLSNFTGIVIKNGDILAGSIYFQLDDNVSLANTRVLTIGVAGLVGGPFVS
                     VFVGILSGVFRLYMGGAEAYTYLISSLFIGLISGYYGRQALEQHQYPTIAKSALIGGM
                     MEIVQMICIFSFAQDKQYAMDLIALIGLPMIVVNSAGTAIFMSIISSTLKQEEQMRAV
                     QTHDVLELTNQTLPYFKEGLNEDSAKHVAMIIKDLMKVSAVAITNRHDILAHVGAGSD
                     HHIPKKEIITHLSKAVLQTGELKEVHTKEEIGCTHPHCPLHAALVIPLKMHGKVTGTL
                     KMYFTNPTNLTFVERQLAEGLAEIFSSQIELGEAEMQSKLLKDAEIKSLQAQVNPHFF
                     FNAMNTISALVRIDSEKARELLLELSHFFRSNLQGSRQNTITLEKELSQVTAYLSLEQ
                     ARFPGRFDVTFDVPEKVKQASVPPFLIQILVENAVKHAFPNRKKGNTIKVGARLKDAQ
                     QLYIEVSDNGRGIPPDKLTQLGQKVVESESGTGSALENLNLRLKGLFSEQAALHFDSD
                     DTGTCVWCTLPYQQKED"
     gene            complement(30032..35719)
                     /locus_tag="PTC28_000412"
     CDS             complement(30032..35719)
                     /locus_tag="PTC28_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YPDG domain-containing protein"
                     /protein_id="HDK5715731.1"
                     /translation="MKKSRKKRIDFLPNRQNRYAIRRFSVGTASILVGATLIFGIHSN
                     DASAAVEDATSQEAGTTNENSNSTEEATTNESTTVEAPTSEEATTEEQSVEAPTSEEV
                     TTEEQSVEAPTSEEVTTEEQSVEAPTSEEVTTEEQSVEAPTSEEVTTEEQSVESPTSE
                     EVTTEEQSVEAPTSEEVTTEEQSVEAPTSEEATTEEQSVEAPTSEEATTKTPVKEETS
                     STQENSPTTTLEEQFSNEFNQLTSTEDKTNYTREYLTQNTNLSAEQVEATVERLNLSQ
                     ENVTAQDIYFALLKDLADQQDALLPRVTLLAARDSELTNEASIALTENSPMFRAALAN
                     SPSGNDVVSEEDNIIVADALANGYINSQTDATNAANTLSGRAWVVDTGTPATMSNGLT
                     AVPEGTKVYMQWIDTDGAVSPVYQASTTNKLSSSGGSQVGPGAYAFDLREAWIDSNGK
                     AHRYEASSGQYYRLWIDDYKTVDGNTATMLRQAGGFFPGSYVNSVTGNNIGQFPLIGT
                     NMQRTGIFMGVIPTNDYMTTDTSNWIQDNEGPISNPAVTSTSEFVSGKVWSETGSGDY
                     ANSATGPNFNSGDIAREGYQVVMSSLTSAGAQAYKAQVESLPTDQQAAAAHQLFKDHP
                     EFISATVTGKTDANGAYTLRFPSGSLSKDYLYGYVMDNKGNLVKGYSSFTSPLFRSPN
                     SNLSFAPQTAPYHRPAKNAWVNVNFALVETIETSIDITNFDVTANPAQRGDTAIIDVT
                     STALSPLPTHVEWRDSKGNVVQKSGDVTTVEEAETAGTFTIPDDAKTGEIYTVYIVSG
                     GNEVAADSLIVQVQENAATYEPVYPTTTVEQDQTVTIPTPTNEDGLALPDGTKFEGGN
                     NVPEWATVNEDGSISISPNQDVEKGNYNVPVVVTYPDGSKETVFAPVLVQEAVPTAEQ
                     YDPTSETINKEYGTTATEDEIKGAITIPDYPTDGDQPTITIDDPTQIPNGTEEGTVNV
                     GVTVTYPDGSTDKLTVPVVTGKQADNDKYTPETTPITKDFGTGVTEDEVKGAVTVPDY
                     PTDGDQPTITIDDPSQLPDGSKEGTTDVDVTVEYPDGTTDHITVPVTVGKQADNDKYT
                     PETTPITKDFGTGVTEDEVKGAVTVPDYPTDGDQPTITIDDPNQLPDGSQEGTTDVNV
                     TVEYPDGTTDHITVPVTVGKQPDNDKYTPESNGVNKDFGTPTTEEDVKDSITIPDYPT
                     DGDQPTVTIDDPNQLPDGSQEGTTDVDVTVEYPDGTTDHITVPVTVGKQADNDKYTPE
                     SNGVNKDFGTPTTEEDVKDSITIPGYPTDGDQPTVTIDDPNQLPDGSQEGTTDVNVTV
                     EYPDGTTDHITVPVTVGKQADNDKYTPETTPITKDFGTGVTEDEVKGAVTVPDYPTDG
                     DQPTVTIDDPNQLPDGSQEGTTDVNVTVEYPDGTTDHITVPVTVGKQADNDKYTPETT
                     PITKDFGTGVTEDEVKGAVTVPDYPTDGDQPTVTIDDPSQLPDGSQEGTTDVNVTVEY
                     PDGTTDHITVPVTVGKQADNDKYTPETTPITKDFGTGVTEDEVKGAVTVPDYPTDGDQ
                     PTITIDDPSQLPDGSQEGTTDVNVTVEYPDGTTDHITVPVTVGKQADNDKYTPETTPI
                     TKDFGTGVTEDEVKGAITIPGYPTDGDQPTITIDDPSQLPDGSQEGTTDVDVTVEYPD
                     GTTDHITVPVTVGKQADNDKYTPETEGVNKDHGTSVTEDEVKGAVTVPGYPTDGDQPT
                     VTIDDPSQLPDGSQEGTTDVNVTVEYPDGTTDHITVPVTVGKQPTKDNGATDNDGDMN
                     QGTDEGNSATDHGDNVKQDSNGNYTPVEQRDNHATSPATDMDPMPSNSQTTFDGINAK
                     GSTSEKANHKQQSEQLPDTGESNTQNGALLGGLFAALGGLFLIGRRRKEKEGK"
BASE COUNT         9966 a         8002 c         6408 g        11410 t
ORIGIN      
        1 aagatttata acccaatgcg attagtcaaa aatgatacca tactgttcga atcattcggc
       61 ggtaaaaatt atagtgatag ccctaagtac atatacgaat acatgaaaaa tgcataccct
      121 aatttaaaat actattggat tttcaacgat attagtaatc ccgaacttcc aaatgatata
      181 caaaaaattc aaaaaggaag ctcagattat tataaaattt tcaaaaaagc gcgtgtatgg
      241 gtttctaact ctagacttcc actatatcta gaaaaaaagc caaatcaaac atatattcaa
      301 acgtggcatg gcactcctct gaaacgactc gccaatgata tgaaacaagt gcgtctacct
      361 gaaactacaa cagaactata taagaggaat ttttatgctg cgactcgtcg ttgggattat
      421 ttgatttcac ccaatccata ttctactgaa atctttcaat ctgcattctg gatggcaccg
      481 aataaaattt tagagacagg gtatccacgt aacgatattt tagtgaatca tgcgaatgat
      541 actatacttc tacaaagtat caaggaagag cttaacattc ctaaagataa aaaagtgtta
      601 ttgtacgcac caacttggcg tgacgatgaa tataaagaag caggtcacta cacgtttgat
      661 ttgccttttg acctacaaca attttatgaa caatttggag atacacacgt tattttatta
      721 agaatgcatt actttatttc gaatcaattg tcacttaaag actacgaaga ttttgcgatt
      781 gatgtatcga attataatga tatttcaaga ctatatttaa ttagtgactg tttgattacg
      841 gattactctt cagtcatgtt tgattatggc attttgaagc gtccgcaact gttctttcct
      901 tatgatattg aaaaatatgc gacggaatta cgtggctttt atatcgacta tcataatgac
      961 ctgccaggcc ctatttatac agatccagat gcattaattg aaggattgaa aaatattgaa
     1021 ctgattcgcg aaacatatca agaccagatt gaagcctttc accaacgttt ttgttcgatg
     1081 gaaaatgggc gtgcggctca atatattggt gacatgatat acaatgagat tcagaaaagt
     1141 tcagattaat aaagttccca cattgataat aataaacaat tgctattttg ggctcgcgtt
     1201 cctaggggct gcccttcaac taactaacgc gtgattgaac tgttacattg aaggaggcgt
     1261 tggtggattt tgggagcagt acagaaatct catgtgcaac aaagatttcg tcgtattgcc
     1321 cccgcaaggc tgactagact tctcaaaaac atgagccttg agaagtcaga cagctactgc
     1381 gatatacaat aaccactgtt aaagttaaat gacgttattt tgctttttac ataatccctc
     1441 aagcgtctcg ccccttttag caatttgaca cttaagtgtg atagacaatg cgggcagact
     1501 tttaatttga agataatcaa tttttttatc ttttgttaat ctaagttaaa ctcatgttct
     1561 catattctaa cttccactta taaaatacaa aaagctgaga tgacgtcatt gtgatctcag
     1621 cttctttcat gtatttcagt tttcctctta attcatttta acgacatcca accacggtga
     1681 atgagttgat catacgtaac gctttacctg acgcatcggc atctactcat aaatcgacaa
     1741 caacgctttt gtataatcat cgcgtgcctc atcaaacagc gcttctattg gaaaagcatc
     1801 gacgacacgc ccttgataca tcactacaat tcgtgagacc catttttgta aaaaggccaa
     1861 gtcatgggaa atgacaacca tggcacagtg tgtccgttcg acatgtcgtt ttaattgctg
     1921 agccatgcga tgttctgcaa tgacatctaa atttgcagta atctcatcac aaattaacaa
     1981 gtctggttgc aacattaatg tgcgaatgac attgaaacgt tgcaattgtc ctccactcaa
     2041 tgcattcgga taccgcttca tcaattcatg agacaatccc atcgatgcca tcaattcatc
     2101 acgataatgt tgatgtgctt gacgctgtga tgcctcataa gctaacgcct catttaatgc
     2161 acgcgctatg gtcatcttag gattaaatgc gtaactggca tgttgtaaaa tcggcaggac
     2221 acgttgaaat gtcgatgtga cctgacctcg ttgggcgcgc aattcaccta acatcacgtg
     2281 cgctaatgta gattttccag acccactttc accgacgata cccacgattt catgcgggcc
     2341 gactgctaat gacacatcat ctaaagcggt cacctcttta tattgcacgg tgatatgttc
     2401 taatttaatc atatgattca ccttgtttta actgacttcg atgttcaaat aacaacgcac
     2461 tgtacggatg gatgtttgct gatttgaaat agatatcgtc accatggtcc acaatacgcc
     2521 catgttgcaa cacatacaga taatcactga atcgtttcac atgggttaag ttatgtgtca
     2581 cgacccataa cgtcacgtcg tgtgcttcag caagatgatg cagtaacgtc atgatttgct
     2641 gccctgtcac agcatctaat gcggcagtag gttcgtctgc gataatgagt gtcggttcta
     2701 acatcatgac gctcgcaatc aggacgcgtt ccagttgccc tcctgacagc atgaagcgat
     2761 accgtttgcg caaatcgagg tggtctaatc ccacccattg caacgctttt tgaacttgat
     2821 gcgccgcttc ttgacgcgac accttgtaat gctgacgata aatcccaatg agctgcttcc
     2881 caatcggcgt atggtcatta aaactatgtg tataatcttg tgaaatatac ccgacttgtt
     2941 tacctaaata cggcttcaat gacgtgaccc tttgtccttg ataatgccat tcatcgtacg
     3001 tcatttcaaa atgttccggt aaagcaccga gtagcgcctt aatcaatata cttttccccg
     3061 caccactttc accaatcaag acgttcactt ttgaagcata aagggtcata tcgagacttt
     3121 ttatgacatg acgttcacct tggcgtactg ttaagttgtt taggtttaat aacttattca
     3181 tgtccacgat gctcctcttg tgtaaaatga tcgcgtaacg catcgccagt caattggaaa
     3241 attaaaattg tcacggctat catcacggca ggcgcaaaca gcagtatcgg attggaagtc
     3301 ataaaatcac gacctgcatt taacatcgcg ccccattcag gtgatggcgg ttgtgcccct
     3361 aatcctaaaa atgatagcga tgaaatatag agaatgtttt tcccgaaatc caccgtcgct
     3421 accactaaaa tagacggcaa aacatgtgga acaaaatgat gtaacatcat gcgatacgtt
     3481 ggaacacgat acaatttcgc catacgaata taatccatat gacgaatact cgccacaatc
     3541 gtacgggtca atcttgtata cgtcatccaa cgtaacaaca ccatcgccca gacgatattc
     3601 caaatactcg gtttcaacaa acttgccatt gcaataatga gcacaaattc tgggatactg
     3661 agaccgatat cgacaatacg catgattgtt ttttcgactt tcccttttaa aaagcccgca
     3721 atcataccga taggcacacc gataacaact gtcatgacga ttgtcaccaa actcacgagt
     3781 agcgtatagc gtgcaccgat aataaggcgt gcgaacaagt cacgtccata gtcatctgtc
     3841 cctagccaat gcatcgaact gatcgataaa aactggtcgc tcaacttcac ttctaacgca
     3901 gcttgtgtgg aaacagaaaa ttgtgcaatg atgagtacca cgacgtacag cgcacatacc
     3961 cataccattt tcggtaattg tcgtaactgt ttcatcattg cgacacctcg tatgttgacg
     4021 ttgacatgtg tgcatcacct ttgtcagttt tcagatagcg ctgtttcgga tctaaaaaga
     4081 ggacaatcgt gtcactcatc aaattagaca gcactacgat tatacctaac atgagtacaa
     4141 tcccttgaat gaccggataa tctcttgccc gaatactatc gactaaaaac cgcccaatcc
     4201 ctggaatacc gaacacattt tcaatgacga ctgtaccacc gattaagctc ccaatagaaa
     4261 gtcctaaaat ggttacaaca gggacgagtg ccggctttaa aatgtcagtc ataaaaatat
     4321 aacgctccga taaacctctt aatcgtgagg cggtcacttc acgactacga tataaatcca
     4381 tgacattggc acgcattaaa cgcacgtaat acgcactcat tccgatgctc atcgcaatga
     4441 ccggtaacac caattgtgca ggtgaaccga aacctgacac gggtaaaatt ttaaaatgca
     4501 acgcaaaaat gtgtagtaaa attattccta aaaagaacga cggaatactc actgtcaccg
     4561 atgttacggc gcgtattatc cgatcaagtt taccattcgg atgacgtgct gcgacaaccc
     4621 ctagaggaag cgcagtcacc atcaccatga taattgtgaa gaacgcaatc gtaatcgttg
     4681 gcggtgcata aaagacaatt tcttgaagga ctggacgacc tgtttgataa cttgtcccaa
     4741 aatcgaactg tacaatttgt cctatccaac gaaaatattg aacaaaccac gcatcattca
     4801 aaccatattg tgcacgtgtt gcctctatag tcgattgtga aatattggat tccccaacat
     4861 gcaaaatttg attgactggg tcgcctggcg tacttttcat caaaataaac gtaatggtcg
     4921 acagcaccca taggatgata atcattttta cgaaagcgcg cacgaaacgc ttaatttgca
     4981 tcttgaatat caaccttatc atcgactaaa taaatgcctt ctggtgttgc cttaaagtgc
     5041 gtcacatctt tattcatgcc atctactgta tcgttatacg taatgtaact tgctggaatg
     5101 tcttgtgcag ctttatcaat aatgtcattt gagagcgact cacgttgcgc tttatctaca
     5161 gtatgattca atgtgtcgat catttctgtc acttctttat ttttgtatgc ccctttattg
     5221 cttgaaccat cttcatggaa cgcttgattg aagaagtaac ctgtatcccc acgtggaatc
     5281 gtaccaaaac tatacatcgt cgcatcccat tgtgagcgat cttctaagta gccttcaata
     5341 tcatcgacgt tgcgaatttc aatatcaata tgtgcttttt tggcatcaga ttgaatgact
     5401 tgtgccattt taggaagttc tgggcgacct tcatatgttg caagttgaat tttgagtgga
     5461 tgtgcatcac tataaccggc atcttccatt aacttttttg caccttcaat atcttgtttt
     5521 ttcactttat ggttgtcaat aaagtctaaa ttatcattaa atgggcccgt tgcaggtttc
     5581 gcataaccat ttgacacatc tttcgccaac cctttacgat caataatttt atccatggct
     5641 tctcgaacat catgcgtcat tttgtcacta tgtaagttgt aaatcaccat ttgtgtacgg
     5701 tagccagaaa cgtgcgacac ttttgtatca cctttatcct cgagttgttt cactcgattt
     5761 acagggacgt ccgtaattaa atccgcttca cctgattgta aatgactgac acgtgcatta
     5821 ccatcttctt gatatgtcac agtcacacca tcaagtttag gttttccatg ccagtaatta
     5881 tcattacgat caagcgtaat cttttgagcg cgttgataat ctttaatttg ataagggcct
     5941 gtaccgactg gcttcgcatc aatgtctgtt tttgcatccg catcgaaaat agcgacgtac
     6001 ggattggcga gttcagaagc gagctctggg taagcctctt tcgtagtaat cgttactttt
     6061 tgaccaaccg cttcaataga tttaatcggt aacgttgatt ttacaaaatc gctctctttc
     6121 aatgcttgtt ctaaactttc tttcactttt tgtcctgtta atttttcacc attttggaac
     6181 tttacatcat ctttaaccgt tagttccaat ttttcagaag agacctgttt aaagtcttta
     6241 gccaaccaag gctgtacttc tccctctttg gatactttga ataaagactc tagtgcgccc
     6301 gctctaacag ggacatctgt ttcatatgga gcaatcgatg tcgttttcaa aggcatctca
     6361 atatctaaca ccttttcgtc agcattgcgg tcccccgatt ctgtaccaca acttgccaac
     6421 aataatgatg ttgttgttaa aacagcgagt gaatatttca atttcatacg ataagcgcct
     6481 tctttctcta taattagcct aactcactat caccgctaat attatatcag aaaaatttta
     6541 gtcatataaa actatttatt ttggttatcc ttaattttta ttttctaaat gttctaaaaa
     6601 tagctttgct tgttggttaa tggttttgaa atcaatacct tgttgttgag cagcaaacac
     6661 acagccacag taacattgac ggaaaatgtc ataatcttga cacatcgtaa ttgaacgttc
     6721 atagccttta tttttcttaa agtcactcgg taaatatttc acatcataca attgttgcac
     6781 gtctaaacca atttcattaa tcaactgtgc atttttcttc ggtgataatg taatcgcact
     6841 accaaaataa tcatagccaa gttctaccgc cgcttctgcc accatttcta aacgcatacc
     6901 aaaacatgcc gaacatctcg caccgccttc aggttcttct gtcaaaccac gagatttcgc
     6961 cattttcata aattcatgcg gctcatatgg cgcttcgata tagcggacat tattgcctgt
     7021 tctttcattg aagtcatgca caaactgctc ttggacacgt gcacgtcgca agtattcatt
     7081 tttgggatgt atgttcggat tcgcaaaata aatggacaca tccgcgtatt ccgttaaaaa
     7141 ctctaacgta taggtactac atggtgcaca acaactatgt aacaaaatgg aaggacgctc
     7201 attttcacgc tcccaattga caatcatctt acgtaaaact ttgtcgtaat tgatcttttg
     7261 atttttcatt ttttctaaaa tgtgttccgc ttgaatcata ggactccccc acttcgaaat
     7321 cttatctctt ttcaataaaa caaatatatc acaaaatttc ttacaatgta tggccatttt
     7381 catcaacaaa aaagcagtca tccaacacga catcggatca ctgctatact gataatgcga
     7441 gatatgccac actaaccagt tcaaatattc atattactca acatcctaaa acgtgatacg
     7501 cacacgccat gcaaatgtat tcaatcgttc aaattcagct ttgccaccca ctgcttcaac
     7561 aattgaagtg agctcatctt taaaaggata gtattccgtc tctaaatcct cgactaaatt
     7621 gacatagccc ttatcacgat acgtctcaat catacgcgct ttgtccgcct cagactcaaa
     7681 cagcgtatca acgagaatca cttgaccctc gtctattaaa aatgacttca aataagtcag
     7741 cgtctctcgt ttactaacat gatctaagtg atgaaaggcg aatgtagaca cgattgtatc
     7801 gaagtgtgcg tcaacaggaa tattcaaaaa gtggccatct agcacatgta tgtcttcttt
     7861 ttgattcgca atcatccgca tgtcttctga aggatcaatg gctgtgacat cgaactcctg
     7921 atggataagc cgctgtgtta aattacctgt gccggcacca atctcaagta cacgtcccga
     7981 tgataatgca accacgccct ctaacattgc tgtgtagccg tcaaacacat cttcatactc
     8041 attgtcatta ccagtgttaa ataccgtttc atcataacgc tctgcccatt tttcaaacac
     8101 gtccataaac tccatgatta tccccttttc aattcctagt atttcgatat gtattatata
     8161 ctaatcaaca actattgcca acctcaaaaa gaagaaaata caattaacta caaattctaa
     8221 aaataaaaag cacagtgcaa aagggcttca caacctttgc actgcacttg ctataatgaa
     8281 acattgacga ctcaacaaag aatcgtgttt tgaaagatca ctgtcataca aaatctttgt
     8341 tgcacatgag atttctgtac tgttcccaaa atccactaac gcttctttta taacagttca
     8401 attaagcgtt agttcgttga gagatcggcg tctcggaaag cgcagcacgg ttcagcaatt
     8461 gtagttacca ccaaaaacaa tatgcctgat ttcaaaaaca ttattccaat acgtcgctct
     8521 tctcggcctt ttccgctaat ccttgtgcta atgggtctaa atacggcttc cctatcaagc
     8581 ccactaagaa gaaaccaaca ccaaatacag taagcatcgt caacttatac gttaaaattt
     8641 gtggcacagg tccacccact gcttctctca atgcatcaat actgtatgag aatggcaaga
     8701 atgggtgaat actttggaaa aattgtggtg tcacttcaat tgggaatgtt ccgccacccc
     8761 cagcgatttg taatacaagc aagacgatag ccagtgcttt acctggattt cctaatactg
     8821 atactaatgt atacacaatc gttgtaaata tcagtgcaga atacatacta atcgcaataa
     8881 aaagtggcac tgattcaatc gatgctttca atatcacaat atccccaata gagacgatcg
     8941 tcgcttgtat gatattcatt aataagaaaa gtcccatttt acctagatat gtttcgcgaa
     9001 tggtcaaata tggttttaac tctggatgct tattgtgcac tgacaacaag ctgacaagta
     9061 acaatgcgcc gacccaaatt gccaatgccg tatagaatgg tgtactcgct gaaccataat
     9121 ctttaactgg gaaaacattc tctttttgta gatcgactgg actggcaatg acaccagctt
     9181 gttttttcag gtcattccgc aataagtcaa ttaaatcttc tatcgtattc tctttatcga
     9241 gttgtttaaa aataccgtct gccttttgca aatcttcttc aacttgcggc aaatcatttc
     9301 ttgcaaattc tgccaaacga tgtaatgttt ctttcgcttt tggttgattt gtatctaaaa
     9361 tattgcgcaa acggtcatat tgtgcgaatg cttctggtaa tttttcattc actgtggcag
     9421 tcgcatcaga aactcgtcct tccactcttg gtaagtcatt ttctacaaag ttggatgctt
     9481 cagcgacctt ttgacgaaat tgtggaaagt aagcttgggc tgctttcatc gcattaatat
     9541 atgctgcttc cacgcgaggt aacgtatcac ttaattggtg taagcgttgt tgcccttcag
     9601 ttaaaaattg ctgcccttgt cgtatcgcac tgtttaactg attcagacgc tgttgtacat
     9661 tgtctaaagt cgttgcccct tgattcaatg ctgcgcccaa tctgtcagaa atatcccgta
     9721 gtgtttgtgt aaaatctcct ctaaggtatt ttccaacagc gtttaagtga tcttttgctt
     9781 tagatagact atccaataca tctgcagctt ctgcttgacc agagttgcct gctgagatag
     9841 catcctttaa tgcattcaaa cgctttgttc gttgttcaat atcttcttgc actgttttga
     9901 gtcgtgattg ggcatctgat aaatcgacac cttcactttt ttcaatgttt gctaaataat
     9961 ctctataatc acgaatcgtt ttcgtcgcgt tattcatacg tgcaatgagg tggtttaacg
    10021 gcgattcaaa ttgttttgga tctttggcgc tcaaaatacc gtaacttaag ttttctgccg
    10081 tatctaaatc agcggacgtc gctttaagtt gttgtgttac cgcttgattc acttgctgca
    10141 atgtatcccc ataagccgtc gtcatcgttt gcgcatctgc tggtgaaatg atgtgacccg
    10201 ctggaacgtt ggtactatct ccttgtgtcg tcgtactcat tgctgccgta tgatatgccg
    10261 tacctcgtgt actttgcggt gtggttgtag tcgcatttcg cgcattttct cctacagctt
    10321 gatttactac tcttccacgg tccacgccat tttgaagtac attcacacgt tgttctactg
    10381 caggcaatag ctgttgaatt tcgttcagtt taacaagtgc ttgatctgta cctgcaatgg
    10441 cacggtccac cccatcgtta atctctggga aatgattagg cacaccactt gccacttgga
    10501 gcacacgctc aatgtctggc atcgcttgat ttaatgacac aataagtttg gcacgctcgt
    10561 taatggctgg gatgctcgcg ttcagttgat ttaaacgctc ggttgctgtc actgcatcat
    10621 ctttatattg atctagtgct ctaaatttgt ccgcatattg atcgatttgg tcttgatttt
    10681 catctaaata aatcaatgtt ttacggaact tttcgatttt tggcaatgca ttattcgccg
    10741 cataaatgcc atctctgact ttgtgatagt tgggcaattg gtcttctagt ttaatgccaa
    10801 tacgatttgc ttcatctaat aaagctttcg tcaccgtctc gttaaatttt ttgttcgcat
    10861 ttctcactat ttcacttgag ccagcatccg tcattttagg tgcaatcgcg ttcagcttct
    10921 gattcacttt atattcgact tcagcttgtt gagggtcttt acgcacaatt ccagtcactt
    10981 gatgcgtgaa tttttctgga atataaatcg ccgcataata ttttcccatt tttaattccc
    11041 gatccgcctt ttctcgactc accatttgcc aatcaaaatg gtcatcttta cgcaaagtct
    11101 cttctatttg attcccaacg ttaatttttt tattgcgcac tgtatcgcct ttatcctcgt
    11161 tgacaactgc aattttaatg ccgtctgtat tcgaatacgg atcccaagtc gcttcgaggt
    11221 tgaaccacgc ataaaaagaa ggcagtatcg ctaaccctaa aatcagcacc atcgctccag
    11281 gtgttttagc aagtttttta atatccgtca gaaaaagttt gatggcattc ttcatttttt
    11341 cacctcaata ttttgtgaaa cactttatta tttactttca ttcatgtaat ataaaatatg
    11401 tataacaatt gcaaaatttc gttattttta tttttaagtt aacacgcatc aacgaaatgc
    11461 aagacatctt ttagtataac aagttcttta gcattttgta tacctttgta taaacggaat
    11521 gcttttgata gtgatgaatc aaacacgtta atctcacatc acgtcacttc cccttgtgac
    11581 ccgagtcgtg ccattatcat tgtgcatttc aaccctattt tacacatcaa tcactgcgct
    11641 ttttttaaga aaggagtctt aaattgaata agaaattcat ttatacaggg ttgttaagta
    11701 ctgcattgct catcccttct gtcacacctc aatgggctgt tgcagcaaca cctcaaactg
    11761 aaaatggacc taaaaatcca aaagtggata atcatgatca agatgtcgcg tcagacgaaa
    11821 cacgtgacga ccgtaaaaag caatctcaat catcagataa aaaagaaaca acgaaacgag
    11881 aatcatcgaa aacaagtgag aaaacaactt cgcaacaaca tgattcaaaa aaggctgacc
    11941 ttttcgacat aacatcccct ttggattcac agttgaaatc gtctttgtcg cctcatacag
    12001 attggtttgg ccaactgttt cattctacat taaatgaaac aacagacgcg cctcagcata
    12061 catatccagc accaacaaat gacgcgacat caatgccaaa acaagcgcaa tcatcgacgc
    12121 ctgaaaatcg agactttttc gagcaacttc aagcgattct gagcggtggt gaagacagca
    12181 aaaatgatac gacaacttca actgatgacg cattatcatc agaccaagca acaacggcat
    12241 caccttcaac tgaacagcga gacaatgacc aagaaaatgt tacaccttca cacaacacgg
    12301 atacttcgaa tgaacagccc tcaactgaag atgcgacaac ttcagaaaaa agcaaagcta
    12361 catcagaagg cacatcggaa gtaccacctg tgaatgacga tagtacaact gaaaagccat
    12421 caacaacggt agatgcaccg gataccgaag ataaacaaac agaaaaccat gcgccatcaa
    12481 ctcgtgacga cgcgacttcg gatcaacaaa ctaaaaaaaa tcaaaatgat gcggtgattg
    12541 atgcactgtt agacgaatat agcgaaaaag ctgaacaaac gcatcatgca tatcaacaac
    12601 aaaaagaggc taatgagcca tcttcaacgt caaaatcgca aaaacatgaa gcgcaagttt
    12661 ctgaccctga cactttcaag tcatcacgag aacaagcacc gaaacaatcc tatcaaaacg
    12721 aggcagatag aaagcaaaca cgtcaaacga cactgtttga aacaatgccc gattctgata
    12781 cgtctacaaa tgatgcagga acaatgcgtg tcgtcccaca atcatcaaca cgtgagttta
    12841 ttaatgacat tgcgaaagat gcacatgata tcggtcaaca agaagacctc tatgcctcta
    12901 tcatgattgc tcaagcgatt ttagaatctg actctggtag aagtgaatta tcacgtgatc
    12961 cttatttcaa cttgtttggt attaaaggca gctatcacgg agaaagcgca catttcaaaa
    13021 ctttggaatc agacggcaag caattgtatg aaatcgatgc tgctttccga aaataccccg
    13081 atcacaaagc gtccttacaa gattatgcag atttaattaa aggaggcatc gatggtaatc
    13141 cgaatatcta tgaagacgtt tggaaaagcc atagttctag ttatcacgat gccgcttcag
    13201 cactcgttgg tacatatgcg acagatccac aatatgacca aaagttagaa gctttaattg
    13261 aagcgtacga tttaacgcgt tttgaccaag atgacatgcc agatttatta gctgagaaag
    13321 atgataacga aactgcgaaa agcgatggcg gtgctttcaa accatttgcc atatctgcag
    13381 actcaccgta tccgtatgga caatgtacgt ggtatgtgta caatcgtatg gcacaatttg
    13441 acattcacat ttcaggtaca atgggaaatg ccgctgattg gacttattct gcacttacac
    13501 aaggttatag cgtatcaagc aaaccaaaag tacacagtgc agtagtattt aatccgaatg
    13561 aattaggtgc agatcgttat tacggtcacg tcgccttcgt tgagaaagtg aatcgtgatg
    13621 gttccatcgt cgtatcagaa tctaatgtca gaggactggg tgtcatttca ttccgtacaa
    13681 ttgatgcaaa agatgccgca caattagatt acattagcgg tgacttagca actgaataaa
    13741 gaatgttact catgctgttt tatttaaaaa gtggtagagg caaggacatt aagttatccc
    13801 cgcctctacc acttttcagg ttttgcttta tttatattta ttaaacagtc aaaaaataag
    13861 gatgaattgg acataaaaat tggatactat tggttttctt gatttcataa acttgccctc
    13921 aatttcaata ttttaatatc agatttccca gaaggctgag acgcctgtgg gaatacgtgc
    13981 atactgctga caatgacctc ttttctttaa tagcggttac tgtttatcgc agtagctctc
    14041 tgacttctca atgtttacac ttttgagaag gcgagtcagc cttgcgggga caatacgacg
    14101 aaacctttgt gacacatgat atttctgtaa tgctcccaaa atccattaac agctcaacaa
    14161 atgtacccgt ttaatcaagc gtttgtgcgt tgaaggggca cccctttgga aagggaagcc
    14221 ttaatggcaa tcaaaaccat aaagcattga ggacaagtta aacaaaatat cgtatcaatc
    14281 gcatcaaaaa tttttatctc tcctcccctt atttatgcat agttttcgtg cttattgttt
    14341 gcgtgttttt ttatgaaatc tcaccgttaa gatcagtaca ccgattgcaa cgactaaaat
    14401 acccaacggt agccaagtcc gcttcactat ttcacctgta ttcggtaaat tgaaatcgcc
    14461 attttgatca aataaaccat ctaaaaagcc ttctgatgcc gtttgactat taatcgcttg
    14521 atatggatcg atattcggct ttggcgcaaa atcatgtttg aataaatcac caccacgacc
    14581 taacaacgaa tgatcacgat ttaacagttg ctgcaatttg tcattcgtac gacctgaaga
    14641 gtgaatgtcg tcacgattta aaccaccacc gagaatattt gcaatacgac gcagcggtgc
    14701 aaacaagtca ttcatatctg tttgcgtatt atgacggatt tgttgcaatt gcttccgtaa
    14761 cgttaacaac cgattcgctt gcgcactaag ttcgtcttca attgccttta agttttgatg
    14821 tgttttcttt ttatctttct gtacacggtc ggcaatcaat tttgcatttt ctgcattaag
    14881 acggccccct agaattgatt caatcacttc agcatctgca tccgtattat taattaacgc
    14941 atttaaaata tcatctccac tcgccttacc attcgcttta aaatggtctt tcaaacggtc
    15001 gagtatcgct gtatttgaag gcttgccttg catgatttcg ccggcaattt tgtgcgcttc
    15061 ttgtttgtca aagcgtgttc gtaaaatgct ttccactaga ccttgtgtat ttgaattatt
    15121 ttccaacatt cctaacaata aatcatcact cgacgttttg ataagtccgt ccgcttgttg
    15181 atgaatttcg tttgccaatt gttgatctgt tttaccttta acatctatct gtttcgcacg
    15241 ttcagccgct tcttgtgcat taaaaatctc acctaatatc gattcaactg ctgcacgttt
    15301 atcgtcatgc tgttgaagtt cagttaaaat cgtatcattt tgcgcgttca gttggttggc
    15361 taccgttttc gcatcatcaa gcaaagtcgc cttctcagtc ccagaaatgt ccgtacgttt
    15421 tttaatgtct tgttcaaagt tttgtaaatg ttgacgtttt tcttcaaaat aattgtcaga
    15481 cttgtgatcc acgctttctg aaacgaaatg gtcaatacgt gtgattgcac tgtcaatgcc
    15541 ctggagtggt gtcacttgct tgttttgcgt tgcatagtct tgtttaagtg tatcgacatc
    15601 gttcttaata tggtctttca gtgcgctcac atcttgttga ccatgatggg gtgctacaat
    15661 cgtttgtgct gaagatgact cctttacttt gctctcgcct ttagtagatg gctctcttcc
    15721 ttctgattca gcactctttg tctctgttga cgttacatct tgacgcgctt cagttgattc
    15781 tcgttgacct tcatcaacct ttgcctttaa cgcgctaatt ttttcatcaa tggcatctaa
    15841 ttcaggttgt atttcatcgt ccgattgagc gtcatgcgct agacgattgg ctgcttctgc
    15901 ttcgtcaaca accacttcaa tattttttga cgacgtatca tattcacgaa ttaacgcaag
    15961 aaattcattt ttataatccg tatttaaata ttgtaacgct ttcacttttt tatctgcatt
    16021 ttcacgtaat gttttcaaat catcagtcgc atctgtctga gctatcgctg tcatttcgtg
    16081 tgacaatgtt gaaggcattt gcagtccact accaaccaat aaaaggacag taccagcttt
    16141 gactaaacga tgacgcatgt tttgagatga aggggatttt cgttctgtca tgccatcatt
    16201 cctttctata acatgtgtct attatagcgc gtattgaaca ctttttaaat aaagataagt
    16261 tctattgcaa attgaaaata agcaaaaagt aagagactga gtcaccccca gcctctttaa
    16321 gccccagtta tgctttgatg atacgttgta atgtcttgta taattccgct tcattcgttg
    16381 tgtctaacaa tcgttgtcgt ttgtcatcat gcattaagtt tttcgacagt tgttgcaaca
    16441 cttttaaatg cgtatcatga ctttgttctg gtacagcaat taaaaagacg agttgtggca
    16501 atgtaccgtc taaactttcc cattgtaccc cttgatcatg tttaagtaca ccaataatcg
    16561 gttgacgtat cgcatttgtt ttcgcatggg gcatcgcgat gtgcataccg agggctgtcg
    16621 tcgattcggc ctcacgtgcg agtacagcct cttttaacac cgcagcattt gccacatagt
    16681 tttcacgcac taaacgatta attatcgtat caatggcttt gtctctatcc ataggcgttg
    16741 ctgtttgaat cattgcttgt ggattcaaca tatcttctac gtctgtatcg tcatttgcct
    16801 tcactgtgga tattgatgtc ctagatatcg cttgagttgc tgtcggttgc tttttaaatg
    16861 ttaacacgag tgctgtcgtg acaaagctac cggctaatac tgcgacgata aacatgagca
    16921 ccccatcgat gcctcctaat accgcaacaa taggtccacc gtgcgcaact ctatcaccga
    16981 catgacccag tgcagcaatg accgaagcca ccatcgcacc gatcatattc gcgggaataa
    17041 tacgtaatgg atcttgtgcc gcaaatggaa tcgcaccttc tgtaatcccg aagagtccca
    17101 tcgtaaatga agctttcccc atttcaattt cattacggtt gaatttacgt ttttgaataa
    17161 atgtcgcaag tccgagtcca atcggcggcg tacagactgc tactgcgacc atccccatga
    17221 cgctgtagtt gccttctgcg attaaagccg aaccaaataa aaatgcaact ttgttcactg
    17281 gaccacccat gtcaaacgca atcattgcac cgataattaa agctaaaatg acaatgtttg
    17341 ccccttgcat ccctttcagc caagtcgtca aagattcaaa aactgctgca atgggcgcac
    17401 ctaaaatgaa aataaaaatc atgccgacga ggaccgacgc aataattgga ataataataa
    17461 tcggcataat cggcgccatc gcttttggca ctttaacatt tttaatccat ttcgcaatat
    17521 aacctgctaa gaaaccggca acgataccgc ctaaaaagcc agcacccgca gtactaccgt
    17581 aaaagctacc gtccgctgca atcgcaccac cgatcatccc tggcacgaga cctggcttat
    17641 cagcaatact caccgcaatg taaccggcca atatcggtac cataaagcta aacgctaatg
    17701 caccaatttt ttcgaacggt ttccaaaatg aatcatcggg aatcactaaa ccttgtgtcg
    17761 ctgttttttc accacctaat gacaatgcca atgcgatgag taacccaccg acaacgataa
    17821 atggcaccat aaaggaaacc ccattcatta aatgttgata aaccatttgc atgccatttt
    17881 tgttattctc gctttggtgt gaagatgtct cacttgcttc agcttgccct gtcgaatgat
    17941 acaccggtac ttccccctgc accacacgtt ggattaaggc ttccggttga tgaatacctg
    18001 ctctgacact ttctttcagg agcggcttac cattaaaccg tgataaatcc acttgtctat
    18061 ctgcggcaat aataataccc tctgcagctg cgatttcttc agctgttaat acattttctg
    18121 taccgacacc cccttgcgtt tccactttaa tatcaatacc gagtgacgct gcggcttgtt
    18181 ctaacttttc ttgtgccata tatgtatgcg caataccgtt tggacaagat gtaactgcga
    18241 gtattttcat acgaatgctt cctctcttca caaaattcat acacctccat cttatccgct
    18301 tcatccatgc aattcaacgt gtttttgaag cgcttacaaa ttttcacagc cgatgcacat
    18361 tccattttaa aaacgagaca aaaagcaagt gcgcaacatt atcagactcg catgtcacgc
    18421 actcaatcct cattatttaa ttggttgtat cgtaaatttc tgtacaatat cctttgaagc
    18481 cacagttcgg gcaagtcaac agtcttgttt gagacgtatg cggtgcaaat aaccatgttc
    18541 gatatggcgg tttaaactgc tgttggcaat ttggacacat gtaactgact tgctgatagt
    18601 acgtatgtgt cattttttgg gctactgtaa ttgcacttcc aaatcctaaa acggctggcc
    18661 ataattgacg atatttccaa ctcaagccaa taccaatcac ttcaaataat gtggctgtcg
    18721 ttcccatcaa aaacatgtgt ttcacgagac gttgatgttg tggtttttgt ttcatcgcat
    18781 cttcaatgtc agatagattt ttaacaggtg cacgtgatga atccagtatc atctgttgca
    18841 tttgcttcat ttgtttcagt tgctgttgtt gttgtcgtat ttccgcctca gtttcttcta
    18901 cttttcgtgt cactaaagta cgtaccgttt gaagtgttcc atccactgac aacatttgct
    18961 taatctcttt aagcgtgaga cctaatgact tcatcactaa aattaggcgc aactgttcca
    19021 cctcatgctc tgtatacatg cgatattgat tatcgtctat ataggcaggt tttaagatgt
    19081 gttgaagatc ataatactga atggttcttt ttgtaagtcc aaacatattc gcaagttcac
    19141 ctgtcgaata atgtgacatc gatttcacct ccatacttca tgtatagcct atgacgtcac
    19201 gtgacggtca acaatttcat gcataatttc gatcattttt tcaggctcat cgacaaatgg
    19261 ggcgtgcgca gtatcttgaa aagcgtaaaa acgtttttct gcagaaccga catgctcaaa
    19321 aaaagcttta ctgtcttcgt atgtcgtctg catgtcgtga accccttgta aaacataaaa
    19381 tgggaccttt atttcctggg caatatcatt caaattcgta tgtgccattt cactagttaa
    19441 atgttcaaac gtggacaaac tacctctgac aatattaatt ctttctatca aacggtaata
    19501 tggcgtttgc atcatcacac gaaacatgcg ccaaacggaa tagccatgac tcgaaaagcc
    19561 gacatggtaa cgcgcagtat aacgttgtct tgctttttca tattgacaat cttgattaaa
    19621 gtcccgtgtt aaatgaatcg ctttgagttg ctggatcgca cgttgattgc gttcttcatg
    19681 cgctaaaaat atcaagtgct gcaaaataca ctgttcattg ccaaacacgt ctccgagctg
    19741 acccatgcca atatacgcgg caatatattc agggtaacga tgcgcgaggt gcgtgccaat
    19801 aatcgtaccg aatgagtgac acatcaaata cacttgctct tgttgaaaat gacgtcgtaa
    19861 aaattgaata agctgatacg agtcagaaat taaatctgcc atttctacag tttcgcgcgt
    19921 atacgacatg cccgtcccac gctgatccca aaagacaact gtataacgat ccgtcaaatc
    19981 aatatgatgt gctctaaaaa aggaataaag cggaaatcct ggcccaccat ggacgacaag
    20041 cagtatcggt ttatcagtac ctcttgattc aataatgata ccttgtcgat gaccgtttaa
    20101 agtcaaatag tgtttctgaa tggtacgtcc atcttgttct acgtatgttt tcatgtctac
    20161 acctcacatc tttcgatatc attataatct attttgagag gcttgtagca tttttaagct
    20221 aaggaagaaa caaatatgat aaaaatcgaa ataaaaaaaa cacaggcctc gtgattcaac
    20281 cgagacctgc catacttagc tatgcatgtg ctttttcata atgataacca atctgatatg
    20341 tagaaacctt atttttcaaa atcgggcttt ccttctcttc atgatgctgt ctgacatttt
    20401 tatgtgacgc tttaaacaca tctgacccta accattcacg aaatgcgtct tcagattgcc
    20461 aaactgttaa aattttcact tcatcatatt cttttaaacc attcgtttgt gtcacataca
    20521 tttcgataaa tccatcaatc gtttcaatgc cttgacgacg gtggaatcgt tccatcgtag
    20581 cctccgctgt ccctttttgt aatgtcaatt tattttctgc cataaacatt ggacttcatc
    20641 tccttttacg cattcgcata agtcgcgtct gcccccttat tgtatctatc tccaaatgag
    20701 gtatcttgat tgttcattca atacagactc actgttcaat cgatcacttc ttttattata
    20761 attgataaag attatcatta tcaactgaaa ttgtgttatt tacgcttttt aaattttttt
    20821 atgagatagt tcaacctgac caaatttaaa atgaaaaagc atacaatacc tgcgataaaa
    20881 agagggatgt tcttataata aaaagtgaaa attgttgtcc aaatgccgag aacaatcacc
    20941 atcatttctg tccaaacaaa ccatcgtctc cgcacagtat cccgatagcg ttcatcaatt
    21001 tgttcaaagt caatattggc aatcacagca tctaatttaa aaatatgaat cacgagtact
    21061 aataaaaaaa caaaaccaaa aacggcaagt gatataatca ttgagttgct cctttttcca
    21121 gatgatttta gttaataaaa gcataacata aaaaaatatt taaaagaaac tcctcaaaaa
    21181 aagaccggaa gatgatgaca ttctcccagc ctttaatgca ttcattgtat cgttattctg
    21241 tttttgtacc gatagaaaga tattttgttt caagataggg ttcgatgcct tcaataccac
    21301 cttcacggcc gtaaccactc tctttcacac caccaaatgg cgcatgcggt gcggatggtg
    21361 caccgtcatt ccaacctacg acaccgtaat gtaagttgtt gtatatataa agtcctgtac
    21421 gataatcgtt tgtgaagaag taagatgcca atccaaattc tgtatcattc gctaaatgaa
    21481 tcgcttcatc aatatcagca aaacgcatta caggcgctac tggaccgaat gtttcttcgt
    21541 gcatacattt catatcatgg ttaacattcg taatgactac tggttttaag aagttaccac
    21601 ctagtgcttg aatgtcctct aattcacgtg ataattgacc gccatgttca accgcatctt
    21661 gaatgtgatc gagcacttta tcgacgcctt tttggttaat gagtggtcca attttcacat
    21721 ctttctccat accgtcccct acttttaagg catggacttg ttcaatgagt tgtttttcgt
    21781 attcttctgc aatgtcttcg tgtacataaa tacggttggc acaaatacaa gtttggcctg
    21841 catttctaaa ttttgtttta atcgtttgtt cgactgcatg ttcaatgtcg gcatctttat
    21901 gcacgatgag tggtgccaga ccgccgagtt ccattgtgac attttttaca gatgctgctg
    21961 attgttcgat taacttttta ccgacgggtg tagagcctgt gaatgtcact ttgttgatca
    22021 gttcatgttc agtgaaaatt tttcctgctg ttttaccact tgctaaaatg tatgaaatcg
    22081 catcttcagg aatgcccgct tcatgtgcta attcgactaa acgaatcgtc gtcatgggcg
    22141 tttgtgtcgc tggtttacat acgattgtac aacctgctgc gagcgcgggt gccattttac
    22201 gtgtaatcat tgcagctggg aagttccacg gtgtaatggc ccctacaacc ccaaccggaa
    22261 atttatccac taaaattttc ttatctggcg aattagccgg aatcgttcta ccgtaaatgc
    22321 gcttcacttc ttcagcatac caatccacat aaccaacagc gtaatccact tcacctaatg
    22381 cttcttgata aggcttgccc ccttcaagtg taatcaattc tgctaatgct tcacggttct
    22441 ctttaattaa agttgaccat tgccataata aacgtgaacg ttcatgcgca tcgacttcac
    22501 gccatgataa atacgcttca tacgcacgtt caattttatg atgaatttca gcttcttctg
    22561 taaatgcata agttttaata acttctcctg ttgaagggtt ttctacatca aactttgtca
    22621 tcttccatcc ctctttcttt tagttagtga ccgtatgaca cttcattgcg tctcatacaa
    22681 ttatcgtaac atgtcgttaa atttgttaca tacttttcac tcagaatgtg ttagattaga
    22741 tttatatttt taatgaaagt agttgattct aacatgacaa ccgcaatccc aaactgtccg
    22801 cagtgtgatt ctgaatatac ttacgaagat ggcggacttt acatttgccc gatgtgtgcg
    22861 tatgaatgga caaacgatac actcgaagca gctgctgaac aagccgtcat ccgtgatgca
    22921 aatggtaatc cacttcaaga tggtgacacg gtgtcagtca ttcgcgattt aaaaatcaaa
    22981 ggcagttctc aaatgattaa acaaggaacg aaagtaaaaa atattaaact cgttgaccct
    23041 gaagacggcc acgatatcga ctgtaaaatt cctggttttg gacaaattgg tttaaaatct
    23101 gaagttgtga aaaaaattaa ataacgttaa aaaataggac aacattgtcg tgcgatacgc
    23161 gctcaagctg tcctatttct atagatgtta ttaaaatgct tcgtcgacag atgcaatggc
    23221 ttcatctatc gtttgacctg ttgataaggc aactgccgca atgaaactgc cttctacaat
    23281 tggggcatcc actttttcaa tacgatgtgt ccccgtatac atttcaatcg ccatatccaa
    23341 attcatttct gatgaaccaa tatcaaaaaa gcaaatcgca tcatcgttta tatcatttaa
    23401 cactgcggaa atgtcatcaa aagacgtacc aatttcacct tcgatcccac caatcgcaac
    23461 gacattcaca tcttgtgcca tttgtgcaag gagttcttgt gtaccttctg caattttatc
    23521 actgtgactc actaaaacga tttgtgtcac gcttcatcag ctcctatcag tgcatttaaa
    23581 atgtaaacac tactttgtgc accagggtca atatacccga ttgagtcttt tttaaaatat
    23641 gaagcacggc ctttcgtcgc ttcgatatca cgtgtcgcat ccgcatatga ttgtaacgtc
    23701 gctaaatcga cagtctcacc ttgttctacc gcttctctcg cacgtgcaat gacgtcatac
    23761 attgtttttt catttaaagt tactttaccg cgttgggcta cagcttcttc aaatgctttt
    23821 aacaattcga ctaagttgtc atgatcaatc tcatcatttg cgacttgcgc cattttaaca
    23881 aaactaaaac cgtataatgg tccagacgcg ccgcccactt ttgacatgag cgtcatacct
    23941 gtcgttttga ataaagcttg catcgagctg tcgtctaatt ggtcaggaag cgcttcaaaa
    24001 ccacgtcgca tattcacacc gtggtccccg tcaccaatcg cacggtctaa ctctgtcaaa
    24061 gcctcttctt ctgtttcaaa tgtttctttt aatgcaagta atcgttcttt taaagttgct
    24121 acgtccatct tggaaacctc ctggattatg ttaaaaaaat cgacttgttg taggtgcgcg
    24181 aaatgctgat aatatgtgtt catcataagg aacaaatgtt aatgaaaagc cttgcatatc
    24241 gagtgatgtc atataatcac ctacaaacca tccttttaca gtctttcctt cttgttctaa
    24301 ctgtaatgcg acatatttcg tcacaatatc taattctgat aatggtgtac cgcccatgcc
    24361 attgaccatg acaatcaatt catcgcttgt cacttcggct ttcaattgtt caatcaaacg
    24421 ttgcacaatt tgttctaccg gttcaactgg tacacgttct aacccacgtt caccgtgaat
    24481 accaatgccg atttccattt cactctcttc aatatcgaaa ccatacttac ctgtcgttgg
    24541 tacagcaggc ggtgttaatg ccatcccaat cgtacgaatt tgatcaatca atgcttcgac
    24601 ttcagttttc agctctgtta atttcttacc acgttctgat aaataaccgg catatttatg
    24661 aacaaagacc gttcccgcaa caccgcgacg tttttcaaca tcatcaatcg caatgtcatc
    24721 acctacgacg accatttcga cttgaatgtc ttccatcgct gccatatctt tagccatttc
    24781 aaagttcatg acgtcacctg cgtaattttt aacaataagt aacacaccgt ctccattgtc
    24841 caccgcttta atagcttcta acactttatc cggtgtcggc gaggtaaaca cttcaccaca
    24901 taccgcagca tctaacatac cttcacctac atagcctgca tgtgcaggtt catgaccact
    24961 gccgccacca gaaactaatg cgacaccaga cgttttttta tgctgacgta caacgaccgt
    25021 atctgcaatg acatcaatgt tcggatttgt aattttcaac ccgtctagca tgtcttgcaa
    25081 aaagtgcgtc ttatcctgga ttaacttttt catttgctca ccttctatcc tattttcttc
    25141 tattataagt tttacaatga aaacgttcac gcaaaaacta ttgtgatata tttgacaatt
    25201 ctgtatacaa aaaagttgta cagacgcgca ttccaactta cacgtactgt acaacatttt
    25261 ttatgctatt gaattgtgtc tagaagaaga taagtgtcaa aatcggaaca actgctacaa
    25321 cgacaacccc aaccagtaca atcgcgatgc tcgccattga ctcctctact ggtcctaatt
    25381 cttttgctgc cgctacacct aacgtatgtc cgctcgttcc taaagataag cctctcgcaa
    25441 tcggatcatc aatgtggaac catttcaata atttattacc taacgcataa ataatgaccg
    25501 catttaaaat aaccgctaat gatgtcaact ctttaatacc gccaatgcct tctgatacag
    25561 gtagtgcaat cgctgttgtt gctgcttgcg gaagcataga tgcgataatg tcactaccga
    25621 attgaagtgc ttttgcgaca aagaaaatac caacaagtgc caatacagta ccaatcccaa
    25681 taccgccgat aatacggtgc caatgtttca ccaagacatc acgctttttg tataaaggaa
    25741 tcgcaaatga aattgtcgct ggtccgagga agaaattaat gatatcccca ccaattttat
    25801 acttttcata tggaatacct gtaaagtgta agaacgctac tccgaaaacc atcgcaacaa
    25861 agagtggtgc gaataagaaa aagccatttg ttttcttaaa aagtacagtt gcgattaaaa
    25921 atggaatcac tgataataaa ataccgaaat acggtgtgtc tatagcgaga tgattaacca
    25981 tgtgaatgcg ctcctttcac tttcgctttc gtacgcggcg gtgttgctac tttatctttc
    26041 gtcgtcatac gcattaaaat ttgtgacgca aagcctgtaa atacaagtag tagaattgtt
    26101 gaaataataa tcaagccaat aatgagaatc ggacttgcac taataatgtc taatgaattt
    26161 acaactgaaa tcccagcagg cacgaataaa aagccaatat tattcgttaa cgctgtgcct
    26221 actttttcaa cttgaccgag cttgatcaca cctgtacata ataaaacgaa caataatacg
    26281 agccctatca ctgatgccgg cataggaatc ggcataaatg attcaataat acttgaaaca
    26341 aacaacaccg atgcaatcac taacacttga tgtaaaaaac tatacgtttt ctcttctttt
    26401 tgtttcactt ttacaacctc ccgtgcgtct ctgattgact tcattatatt atgaaaaaat
    26461 tcacatatac cgttttcatc gcgaaatgca aaaaaagagg cgtgaaatac aaaatcacac
    26521 ccttgtccaa caaccacact atttaaatgt catatagtgg cgcaaagcat acttttttaa
    26581 aatcactcaa ctttcagcaa ttcgaacctg ttccctttca cttaacacta tatgaggcgg
    26641 caaatagttg accggtatca tcgcctcgga aagcgcaaca cgattcaaga tctcgcacta
    26701 tcctttctct cctcgaatac tgaagggggg taggctttgt ttcatgaggt gcagtttcgt
    26761 tctaatcatt tcaacccacc attgaccagc ttgaggcact tacccagact gcaagaatcg
    26821 tgcaagactc ccgagggata aaataaatat ctaaatatga tttctactct ttaatagtgg
    26881 ttcctgttta tcgcagtagc tgtctgactt ctcaatgcgc tcgcttttga gaagtctagt
    26941 cagccttgcg ggggcagtac gacgaaatct ttgttacaca tgagatttct gtaccgctcc
    27001 caaaatccaa tttgtcttcc atcctgcgta catctcaatc aagccgaatt tagttggagg
    27061 ggcagcccct tggaaagcgc agcacgattc agcagtcaac gattacccca aaaccacaaa
    27121 tgtatcttca agtatttcta aaataccact catgaaatca aagagtgaga cacatcaaac
    27181 cgactgtctc actcctcatc attccactca cagctttaaa cccatcgcct gcttaaactt
    27241 cttcatatac gaccgactca cctgcatctt caccccatcc gtcaaagtca ccatgtacgt
    27301 cgaattaaac caatgctcaa tcgcctcaat atgctgtcga ttgatcacat tcgaccgatg
    27361 aatccgaata aactgtgcct catccaatcg cttctcatac gcactcaatg gctcatgtgt
    27421 ctcatactca ccttgcgtcg tataaatcgt ggttacacct tgattgaccg aaataccaat
    27481 cacgtcaaca gggttcagca tatgaatacg ctcaccaatt tcaatcggta aaggttgcgt
    27541 tactttcaca gctgaatgtg gcacatgcat gtcttcgtac ttttcctgct gtgcacgcac
    27601 ttttgccaca gcttgcgcaa tgcgagattg atcgaatggc ttcataatat aatctgtcgc
    27661 attcagttca aacgcctgta ccgcaaattg gtcatgcgct gtcgcaaata caatcgcagg
    27721 cggtgctttc atcttctgta tttttttacc taattcaatc ccattttcat tcattaaatt
    27781 aatatctaaa aacaccaaat catattcgtt tactaataac gcttcaatcg tttcgctcac
    27841 attttccgct tcatctaaaa catcaaatcc tccgatacga ttcaataaat atatcaattc
    27901 attacgcgcg agtggttcat catcaacaat taatgcacgc atgatttaat cctccttctg
    27961 ttgataaggt aacgtacacc atacgcacgt tcctgtgtca tcactatcaa aatgtagcgc
    28021 ggcttgctca ctgaacaaac cttttaatct taaatttaaa ttttctaaag cactacccgt
    28081 tcctgactct gactcgacca ctttttggcc caattgcgtc aatttatctg gtggaatccc
    28141 acgtccattg tcactcactt caatatagag ttgttgcgca tcttttaatc gtgccccgac
    28201 tttaattgtg ttgccttttt tacggtttgg aaacgcatgt ttgaccgcat tttccactaa
    28261 gatttgaatt aaaaatggtg gcacagatgc ttgtttcacc ttttctggca catcaaaagt
    28321 cacatcgaat cgtcctggaa aacgcgcttg ttcgagtgat aaataagccg tcacttgact
    28381 taactctttc tctaaagtga ttgtgttttg acgcgaacct tgtaaatttg aacgaaagaa
    28441 atggctcaac tcgagtaata attctctcgc tttttcacta tcaatacgta ctaatgctga
    28501 aatcgtattc atcgcgttaa aaaagaaatg cgggttcact tgtgcttgaa gggatttaat
    28561 ctccgcatct ttcaacaact tactttgcat ctctgcttct cccagttcga tttgactact
    28621 aaaaatctcc gccaaacctt ctgctaactg tcgttcgaca aacgttaaat tggtcggatt
    28681 cgtaaagtac atttttaacg tccctgtcac tttcccatgc attttaagtg gaatcactag
    28741 cgcggcatgc agtggacaat gcggatgcgt gcaaccaatt tcctctttcg tatgcacttc
    28801 tttaagctca ccagtttgta gtaccgcttt agataaatgc gtaataatct cttttttagg
    28861 aatgtgatgg tcactccccg cccccacatg tgccaaaatg tcatgtcgat tcgtaatagc
    28921 gacggccgat actttcatca aatctttaat aatcatcgcc acgtgttttg cggagtcttc
    28981 attgagcccc tctttaaaat aaggcaacgt ttgattggtc aattctaata catcatgtgt
    29041 ttgaacggca cgcatttgtt cttcttgctt caaagttgaa ctgatgatag acataaaaat
    29101 cgctgtacct gcactattaa cgacaatcat cggcagtcca atcaaagcaa tcaagtccat
    29161 cgcatactgt ttgtcttggg cgaacgaaaa aatacaaatc atctggacaa tttccatcat
    29221 accaccgatc aatgcacttt tcgcaatcgt tggatattgg tgttgttcga gcgcttgacg
    29281 tccataatat ccagaaataa gtccaataaa tagggaagaa attaaatatg tatatgcttc
    29341 tgcaccaccc atataaaggc gaaaaacacc agataaaatg ccgacaaaca cactgacaaa
    29401 aggtcctcct accagtcctg cgacaccgat tgtcagcaca cgtgtattcg ctaaagaaac
    29461 attatcatct aattgaaaat aaatgctccc cgctaaaata tcgccatttt taatgacgat
    29521 acccgtaaag ttagacaaca gcgcaaagag gctaaagacg atacacaatt gccactttga
    29581 tgcccatgct tgtcgctgtt gcatcgtatg cttgaagtat tttgaattca ttaaaatgta
    29641 cgccaatata ataatgagtc cgacacgctc caacagtaat atcgttaaat taaacatcga
    29701 ttttggctcc ttttgcaatg atgagacttt ttgaaacttt attctagttt atcacaacac
    29761 aacaaacatg cccgatagat agaatgacta attttttaca gttacaatga tttaatatag
    29821 aaaattacgc cacgatctaa cttttgtcag ataataacgg tgctgtatgt gtgagtgttt
    29881 tttataaaag atgattaagc aggggtttcg acattttgta gtacattgtc gtagtatctc
    29941 gaataataaa aaagacttgc ccccattaaa gaggacaagc ctattcattg ccttagtcgt
    30001 gattgaattg agaattgatg cgcgttgtta attatttgcc ttctttttct ttacgacgtc
    30061 tgccgattaa gaataagcct ccaagtgctg caaataatcc gcctaaaagt gcaccatttt
    30121 gtgtattgct ttcacctgtg tctggtaatt gctcagactg ttgtttatgg tttgctttct
    30181 ctgaagttga accttttgca tttatgccat caaaagttgt ttggctattg cttggcattg
    30241 gatccatatc tgttgcaggt gaagtcgcat gattgtcacg ttgttcaacc ggcgtatagt
    30301 ttccgtttga atcttgtttt acattgtcgc catgatcagt agcactattt ccttcatctg
    30361 tgccttgatt catgtcgcca tcattatctg tagccccgtt atctttagta ggttgtttac
    30421 caacagttac tgggactgta atgtggtctg ttgttccgtc tggatattcc actgttacat
    30481 ttacatcagt cgtaccttct tgtgaaccgt ccggcaattg acttggatca tcaattgtaa
    30541 ccgttggttg atctccatct gttgggtatc ccggaacagt gactgcacct ttcacttcat
    30601 cttctgttac tgacgtacca tgatctttgt tgacaccttc tgtttctggt gtgtacttat
    30661 cgttatctgc ttgcttacca acagttactg ggactgtgat gtgatctgtt gtgccatctg
    30721 gatattccac tgttacatcg acatccgttg ttccttcttg tgaaccgtct ggtaactgac
    30781 tcggatcgtc aattgtaatt gttggttggt ctccatctgt tgggtaacct ggaattgtga
    30841 ttgcaccttt cacttcatct tctgttacac ctgtaccgaa gtctttcgta attggtgttg
    30901 tttctggtgt gtacttatca ttatccgctt gctttccaac agtcactgga actgtgatgt
    30961 gatctgttgt gccgtctgga tattccactg ttacatttac atcagtcgta ccttcttgtg
    31021 aaccatcagg caactgactt gggtcgtcaa tcgtaattgt tggttggtct ccatctgttg
    31081 ggtaatccgg aacagtgact gcacctttca cttcgtcttc tgttacacct gtaccgaagt
    31141 ctttcgtaat tggtgttgtt tctggcgtgt acttatcgtt atctgcttgc ttaccaacag
    31201 tcactggaac tgtgatgtgg tctgttgtgc catctggata ttccactgtt acattcacat
    31261 ctgttgtgcc ttcttgtgag ccatctggta actgactcgg atcgtcaatt gtaaccgttg
    31321 gttgatctcc atctgttggg taatccggaa cagtgactgc acctttcact tcgtcttctg
    31381 ttacacctgt accgaagtct ttcgtaattg gtgttgtttc tggtgtgtac ttatcgttat
    31441 ccgcttgctt tccaacagtc actggaactg tgatgtgatc tgttgtgcca tctggatatt
    31501 ccactgttac atttacatca gtcgtacctt cttgtgaacc gtccggtaat tgatttggat
    31561 catcaattgt aaccgttggt tggtcaccgt ctgttgggta atccggaaca gtgactgcac
    31621 ctttcacttc gtcttctgtt acacctgtac cgaagtcttt cgtaattggt gttgtttctg
    31681 gtgtgtactt atcattatcc gcttgctttc caacagtcac tggaactgtg atgtgatctg
    31741 ttgtgccgtc tggatattcc actgttacat ttacatcagt cgtaccttct tgtgaaccgt
    31801 ccggtaattg atttggatca tcaattgtaa ccgttggttg gtcaccgtct gttgggtagc
    31861 ctggaattgt gattgaatct ttcacatctt cttctgttgt cggtgtacca aagtctttat
    31921 ttacaccatt tgattctggt gtgtacttat cgttatccgc ttgctttcca acagtcactg
    31981 gaactgtgat gtgatctgtt gtgccatctg gatattccac tgttacatcg acatccgttg
    32041 ttccttcttg tgaaccatcc ggtaattgat ttggatcatc aattgtaacc gttggttggt
    32101 caccgtctgt tgggtaatcc ggaattgtga ttgaatcttt cacatcttct tctgttgtcg
    32161 gtgtaccaaa gtctttattt acaccatttg attctggtgt gtacttatcg ttatctggtt
    32221 gtttaccaac agtcactgga actgtgatgt gatctgttgt gccatctgga tattccactg
    32281 ttacatttac atcagtcgta ccttcttgtg aaccgtccgg taattgattt ggatcatcaa
    32341 ttgtaattgt tggttggtca ccgtctgttg ggtaatccgg aacagtgact gcacctttca
    32401 cttcgtcttc tgttacacct gtaccgaagt ctttcgtaat tggtgttgtt tctggtgtgt
    32461 acttatcatt atccgcttgc tttccaacag tcactggaac tgtgatgtga tctgttgtgc
    32521 cgtctggata ttccactgtt acatcgacat ccgttgttcc ttcttttgaa ccatcaggca
    32581 actgacttgg gtcgtcaatc gtaattgttg gttggtctcc atctgttggg taatccggaa
    32641 cagtgactgc acctttcact tcgtcttctg ttacacctgt accgaagtct ttcgtaattg
    32701 gtgttgtttc tggtgtgtac ttatcgttat ccgcttgctt acctgtaacg actggtactg
    32761 ttaatttgtc tgttgaacca tctggataag tgacagtgac acccacattc actgtgcctt
    32821 cttctgttcc atttggaatt tgagttgggt cgtcaatcgt gattgttggt tgatctccat
    32881 ctgttgggta atccggaatt gtgattgcgc ctttaatttc atcttctgtt gcagtagtac
    32941 catattcctt attaattgtt tcacttgttg gatcgtattg ttctgcagtt ggaacagctt
    33001 cttgaactaa aactggtgca aatactgttt cttttgaacc atctggatat gtgacgacaa
    33061 caggcacatt atagttacct ttttccacat cttgatttgg tgaaattgaa atagaaccat
    33121 cttcattcac agttgcccat tcaggtacat tgttgccacc ttcgaacttt gttccgtctg
    33181 gtaatgctaa accatcttca tttgtaggtg taggaattgt tacagtttgg tcttgttcaa
    33241 ctgttgttgt tggatataca ggttcatagg ttgccgcatt ttcttgcact tggacaatca
    33301 gtgagtctgc tgcaacttca ttgcctcctg aaacaatata aactgtatag atttcacctg
    33361 ttttcgcatc atcaggaata gtaaatgtgc ctgccgtttc agcttcttct accgtagtga
    33421 catctccact tttttgaacg acattccctt ttgaatctct ccactcaaca tgcgtaggta
    33481 atggtgacaa tgctgtagaa gtcacatcaa tgatagccgt atcaccacgt tgcgctgggt
    33541 tggctgtcac atcaaagttc gtgatgtcta tacttgtttc aattgtttct acaagcgcaa
    33601 agttcacatt cacccaagca tttttggctg gtctatgata tggcgctgtt tgtggcgcga
    33661 aagataagtt actgttaggc gaacggaata aaggtgacgt gaatgatgaa tagcccttaa
    33721 ccaagttgcc cttattatcc atcacataac cataaagata atctttactc aatgagcctg
    33781 aagggaaacg taatgtatac gcaccgtttg catcagtttt acccgtcact gtcgcagaaa
    33841 taaattctgg gtggtctttg aataattggt gtgctgctgc cgcttgttgg tctgttggca
    33901 acgattcgac ttgtgcttta tacgcttggg caccagcact tgttaatgaa gacatgacaa
    33961 cttgataacc ttcacgtgca atatcacctg agttaaagtt tggacctgtc gcagagttcg
    34021 catagtcacc tgaacctgtc tcagaccata ctttaccact gacaaattca cttgtgctcg
    34081 ttactgctgg gtttgaaata ggtccttcat tatcttgaat ccaattgctt gtatctgtag
    34141 tcatgtaatc gttcgttggt atcacaccca taaagatacc tgtacgttgc atgttcgttc
    34201 cgataagtgg gaattgacca atattgttac ctgtcaccga attaacatat gaaccaggga
    34261 agaaaccacc tgcttggcgt aacatggttg ccgtattccc atctactgtt ttgtagtcat
    34321 caatccataa acgataatat tggccacttg acgcttcata tctgtgcgct ttgccatttg
    34381 agtctatcca tgcttcacgt aaatcaaatg catatgcacc tggacctact tggctaccac
    34441 cacttgaact caatttattt gttgtgcttg cttgatacac tggtgaaacc gcgccatctg
    34501 tatcaatcca ttgcatgtag acttttgtgc cttctggaac agctgttaag ccgtttgaca
    34561 ttgtcgctgg tgtccctgta tccacaaccc atgcacgacc agacaatgta tttgccgcat
    34621 ttgttgcatc tgtttgtgaa ttgatgtatc catttgcgag tgcatcagcc acaataatat
    34681 tatcttcttc tgacaccaca tcattgccag aaggactatt cgctaatgct gcgcggaaca
    34741 ttggactatt ttcagttaaa gcgatagacg cttcgtttgt gagctcagaa tctctagcgg
    34801 ccaaaagtgt tacacgtggt aataaggcat cttgttgatc agctaaatct ttaagtaatg
    34861 cgaaatagat atcttgggct gttacatttt cttgacttaa attcaagcgt tcaactgttg
    34921 cttccacttg ttctgccgaa agatttgtgt tttgagttaa atattcacgt gtgtagtttg
    34981 ttttatcttc tgtagatgtt aactgattga attcatttga aaattgttct tctagtgtag
    35041 tcgtgggtga attttcttgt gttgaggatg tttcttcttt tacaggagtt tttgtagttg
    35101 cttcttcact tgttggtgct tctactgatt gctcttccgt tgttgcttct tcacttgttg
    35161 gtgcttctac tgattgctct tccgttgtta cttcttcact tgttggtgcc tctactgatt
    35221 gctcttccgt tgttacttct tcacttgttg gtgactctac tgattgctct tccgttgtta
    35281 cttcttcact tgttggcgct tctactgatt gctcttccgt tgttacttct tcacttgttg
    35341 gcgcttctac tgattgctct tccgttgtta cttcttcact tgttggtgcc tctactgatt
    35401 gctcttccgt tgttacttct tcacttgttg gcgcctctac tgattgctct tccgttgttg
    35461 cttcttcact tgttggtgct tcaacagttg tactttcgtt tgttgttgct tcttctgtac
    35521 tatttgaatt ttcgttagtt gttcctgctt cttgagatgt tgcgtcttct actgctgccg
    35581 atgcatcatt tgaatgaatt ccaaaaatta atgttgctcc aacgagaatt gacgcagtgc
    35641 ctactgaaaa acgacgtatc gcatatcgat tttgacggtt aggtaaaaaa tcgatacgct
    35701 tttttctaga ctttttcatg aaatttatca tctccttaat caaattaaat tgtgctacga
    35761 attaaagaat ataccattac tttgca
//
LOCUS       DANHPA010000010        35349 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.010, whole genome shotgun sequence.
ACCESSION   DANHPA010000010 DANHPA010000000
VERSION     DANHPA010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 35349)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35349)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35349
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.010"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(856..2223)
                     /gene="ffh"
                     /locus_tag="PTC28_000413"
     CDS             complement(856..2223)
                     /gene="ffh"
                     /locus_tag="PTC28_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002457378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HDK5715732.1"
                     /translation="MAFEGLSDRLQATMQKIKGKGKVTEADIKAMMREVRLALLEADV
                     NFKVVKNFVNTVSERALGSDVMKSLTPGQQVIKIVQEELTTLMGGDNTSITMAKKPPT
                     VVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAINQLQTVGKQIDIPV
                     YSEGDQVPPQQIVQNALQHAKAEHLDFVIIDTAGRLHIDEALMNELQEVKEISKPDEI
                     MLVVDAMTGQDAVNVAESFDQQLDVTGVTLTKLDGDTRGGAALSIRAVTEKPIKFVGM
                     SEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDEEKARDLEKKMRTSSFTLEDF
                     LEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPEERENPD
                     KLNVSRKRRIAAGSGRTLQEVNRLLKQFNDMKKMMKQFTGGGKGKKGKQAQLQNMLKG
                     MNLPF"
     gene            complement(2237..2572)
                     /locus_tag="PTC28_000414"
     CDS             complement(2237..2572)
                     /locus_tag="PTC28_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding protein"
                     /protein_id="HDK5715733.1"
                     /translation="MHHDDDLIKTVRMNYLFDFYQSLLTEKQRNYLRLFYLEDYALSE
                     IAETFEVSRQAVYDNIRRTGDLVEDYEQKLGLYRRFTRRQEIFQQIRNHIHEPEHIQQ
                     YIQELEELE"
     gene            complement(2576..3775)
                     /gene="ftsY"
                     /locus_tag="PTC28_000415"
     CDS             complement(2576..3775)
                     /gene="ftsY"
                     /locus_tag="PTC28_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HDK5715734.1"
                     /translation="MSFFKRLKDKFAKPDNEQQLEQDLQQDAVEHQEPERTQHTAPSE
                     TVHQDNDLTSVEDEFDDGLMSIEEFEELESQKIGAKFREGLEKSRENFQNQLNNLLAH
                     YRKVDEDFFEALEEMLIQADVGFNTVMELVDELRMEAKRRNITETEDLREAIVEKIVE
                     IYQQDDEKSEEMNIEDGRLNVILMVGVNGVGKTTTIGKLAHRYQAQGKKVMLAAGDTF
                     RAGAIEQLEVWGQRVGVDVIRQGEGSDPAAVMYDAINAAKNKGVDILICDTAGRLQNK
                     QNLMNELEKVKRVISRSVPDAPHEVLLALDATTGQNALAQAKAFKEVTDVTGIVLTKL
                     DGTAKGGIVLAIRNELHIPVKYVGLGEKLDDLQPFNAESYVYGLFADMIEQNVPEVAE
                     NQPENEG"
     gene            complement(3777..7349)
                     /gene="smc"
                     /locus_tag="PTC28_000416"
     CDS             complement(3777..7349)
                     /gene="smc"
                     /locus_tag="PTC28_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002505738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HDK5715735.1"
                     /translation="MVYLKSIDAYGFKSFAEATQIQFDKGVTAIVGPNGSGKSNITDA
                     IKWVLGEQSARSLRGSKMEDIIFSGAQHRNAQNFAEVQLKLDNSKGLLNFDATEVIVT
                     RRLYRNGDSEFYVNNERRRLKDIHELFLDSGLGKEAFSIISQGRVDEVLNAKPTDRRQ
                     IIEESAGVLKYKKRKEASLEKLSHTEDNLTRVEDILYDLEGRVEPLKEEAAIAKEYLQ
                     LSDILKESDIRVTVHDIVSHQTQIAEHDTALNELKSQQADTHHKKSQISHTMQKAKGE
                     RFEVDQQLEKVNQQLIETTEQVEKLTGQYQLIEERQKNQSQSNARIEEEQASIAQHQQ
                     QLDQDVAETEKTLSQLKEKRQQLNQHIQTLEGQLYQSDETMEEDVETLKDTYYQLMTE
                     QADINNDIRFLTKTIEEHKAKQSRIDSRLTEAYAQLKDAQQHMHDIEQRQQQKKRQMT
                     KIENDCKQIEASLSKAKSEQTEAESQLYQAYRYNDKLKARIETMKMREDDLSSFYQGV
                     KAVLKAKAQQLQGIHGAVAQQIDVPSKYTKAIETALGASMQYVIVSDEAAARQAIQFL
                     KTKKLGRATFLPLNVIKAKTLDPRVVQTAQQMTGFVTLASEAVKVDTTYKAIIDNLLG
                     RTLIVDGLKNANDMARAIQYQTRIVTLEGDVVNPGGSMTGGGTQQRQSLLGQKDELQQ
                     LQAQLETYLEKTKQLELFCQNQKSQQDTLSEQYVTAQQDFNTYKQALHDLSLEHDRYR
                     EIEQRLKNENEEFEFEKNDGYQSDKSEATLKDKQARQVEIAEQLEQMEQQIKAMTEQR
                     KVSQAQASQLQQQLHQYKSDLAVVVERIKTQQQQLKRMEKEQQQIDAQQQKLTDQLAL
                     INSDEVNDRSTLEKIQAQITKYQDAKTRHLEQQRQLRQQRQDIEDLIESNEQALESIH
                     QKLLEIENQYQNIKSAQSRLDVLIDQALKHLNEKYHMTFEHAKSSYSLADANIDALRQ
                     KVKLTQMSIDELGHVNLNAIEQYEEVSARYTFLSEQRNDLREAKATLEQIIQEMDAEV
                     AERFSTTFHAIQDHFASVFKNLFGGGQAELILTEKDYLTAGVDIKVQPPGKKLQHLSL
                     LSGGERALSAIALLFAILKVRSAPFVILDEVEAALDEANVIRYATYLKTLSKETQFIV
                     ITHRKGTMEMCDCLYGVTMQEMGVSRLVSVNLNTIDEVLKEEQA"
     gene            complement(7353..8084)
                     /locus_tag="PTC28_000417"
     CDS             complement(7353..8084)
                     /locus_tag="PTC28_000417"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HDK5715736.1"
                     /translation="MTKVRKETLIAEFQENFAKKMKALNLTYDNMSLYQQAFSHSSFI
                     NDFNMDRTEHNERLEFLGDAVLELTVSRYLFDAFPKLPEGELTKMRANIVCEPSLVVF
                     AQHINLMPLILLGKGEEKTGGRTRPSLVADVFEAFVGALYLDQGLEAVWQFAEAVIFP
                     HVKGRQLIGVVDFKTKFQEYVHQNYLGVIKYRVAKEEGPAHNKTFTSEILLNGEAVSR
                     GEGRTKKESEQKAAEQAYLLMTHKE"
     gene            complement(8978..9211)
                     /locus_tag="PTC28_000418"
     CDS             complement(8978..9211)
                     /locus_tag="PTC28_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002510960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDK5715737.1"
                     /translation="MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVM
                     ELEDEFGTEIPDEEAEKINTVGDAVNYINTLDK"
     gene            complement(9440..10177)
                     /gene="fabG"
                     /locus_tag="PTC28_000419"
     CDS             complement(9440..10177)
                     /gene="fabG"
                     /locus_tag="PTC28_000419"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HDK5715738.1"
                     /translation="MSKVALVTGASRGIGRSIALQLAEEGYNVVVNYAGNQEKAEAVV
                     EEIKNKGVESVAMQANVANGDEVKAMIKEIVKTFGSLDVLVNNAGITRDNLLMRMKEH
                     EWDDVIDTNLKGVFNCIQKATPQMLKQRAGRIINLTSVVGAVGNPGQINYVASKAGVI
                     GMTKTAARELASRNITVNAVAPGFIVSDMTDALNDDLKETMKTQIPLGRFGQDTDIAH
                     TVAFLASDKAAYITGQTIHVNGGMHME"
     gene            complement(10170..11096)
                     /gene="fabD"
                     /locus_tag="PTC28_000420"
     CDS             complement(10170..11096)
                     /gene="fabD"
                     /locus_tag="PTC28_000420"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HDK5715739.1"
                     /translation="MSKTVLMFPGQGAQKVGMAQDLYQQDEAATKILEAAAEHMPFNL
                     LETMFEDPNQVLGQTENTQPALLTHSMALYAAMGQSTADYTIGHSLGEYSSLVMSGVL
                     KFEDAVQIVRKRGELMAQAFPNGVGGMAAVLGLSFDEVKAICDQISTEDAIVEPANIN
                     APGQIVVSGHKVAVDRLVSEGKSLGAKRVMPLDVSGPFHSSMMQVIEDEFKTYINQFE
                     WHDATTPVVQNVHARPETDAETIKQQMVKQLYSPVQFIDSVQWLIDQGVDHFIEVGPN
                     KVLSGLVKKMSRDVKITSIQTLEDVKEWIGNE"
     gene            complement(11089..12075)
                     /gene="plsX"
                     /locus_tag="PTC28_000421"
     CDS             complement(11089..12075)
                     /gene="plsX"
                     /locus_tag="PTC28_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HDK5715740.1"
                     /translation="MVKLAVDMMGGDDAPHIVLEAVEKAVQDFDDLEIILFGDEKQCH
                     LNHPRVEIRHTTEEISMEDEPVRAIKRKKDSSMVRMAEAVKNGEADGCVSAGNTGALM
                     SAGLFIVGRLPGVARPALVVTLPTVSGKGVVFLDVGANADAKADHLYQNAVLGHIYAQ
                     KLRDIAEPRVALLNIGTEDKKGNSLTKEAFRLMSETDQFKFTGNIEAKSIMEDEADVI
                     VTDGFTGNIVLKNLEGTAKSFGKILKNDLLSSLKNKLAALVLKNDIKRIAKQLDYSEY
                     GGSVLLGLDGIVVKAHGSSNAKAFYSAIRQAKIAGETKIVENMRAKVGDTDE"
     gene            complement(12077..12637)
                     /gene="fapR"
                     /locus_tag="PTC28_000422"
     CDS             complement(12077..12637)
                     /gene="fapR"
                     /locus_tag="PTC28_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription factor FapR"
                     /protein_id="HDK5715741.1"
                     /translation="MKKTKDERRTLIETTIQQNPFITDQALSDMFEVSIQTIRLDRSQ
                     LQIPELRERVKNVAKDQYQNISALEDQDIIGDIVSLEPNLSGKSIMTISKKDVFTRNA
                     IARGHVLFAQANSLCVAIVKHASVLTKESHIHFVKPVQLGDVVVAEAEVQFHDDKYYE
                     MSVTSFVAQEKVFEGLFKMYYISEDE"
     gene            complement(12764..14809)
                     /gene="recG"
                     /locus_tag="PTC28_000423"
     CDS             complement(12764..14809)
                     /gene="recG"
                     /locus_tag="PTC28_000423"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HDK5715742.1"
                     /translation="MTKLNLIENPYALKDIKGLGPKRLAILNEMNIHTIQDLVLYLPT
                     RYEDNTLVDLTTAEDESHVTVRGEVYSTPTVAFFGRNRSKLTVHLMINGIAVKAVFFN
                     QPYLKNKIQLHETVVIKGKWSRRKQEINGQKMFFDLSQLADAQFTPVYRVKEGLKQKT
                     LRDMIQQTLQDITIHEWLPASMREQYKLETLHDTIHALHEAKDQQSLLRARRTFAFTE
                     FFMFELRMQWLNRMEKMSEEAIEVQYDIQQVKTFIETLPFELTEGQKQSVNEIFRDLK
                     APIRMHRLLQGDVGSGKTVVAAICMYAMKTAGYQSALMVPTEILAEQHAESLVELFGP
                     YMNVALLTGSVKGKKRQLLLERLANGEIDCLIGTHALIQDDVAFHNVGLVITDEQHRF
                     GVQQRQKLREKGALSNVLFMTATPIPRTLAISVFGEMDVSSIKSLPKGRKPIETYWVK
                     HEQYAQVIEHMERELRQGRQAYVISPLIESSEHLEDVQNAIALYENLQVALPQRRIGL
                     LHGKMSADEKDDVMHRYSAHELDVLVATTVVEVGVNVPNATFMMIYDADRFGLSTLHQ
                     LRGRVGRSDFQSYCVLIASPKTETGIERMQIMTQTTDGFELSEKDLEMRGPGDFFGVK
                     QSGLPDFLVGNLVEDYRMLEVARDEAAQLMQSGVFFTNEFERLRTFIEDKVLYQSFD"
     gene            complement(14812..15681)
                     /gene="sdaAA"
                     /locus_tag="PTC28_000424"
     CDS             complement(14812..15681)
                     /gene="sdaAA"
                     /locus_tag="PTC28_000424"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002507890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent,
                     subunit alpha"
                     /protein_id="HDK5715743.1"
                     /translation="MFKSVKELIERCEAENKAIYEVMLEQEMAVTGMTAEEVYTHMDR
                     NLQTMENALEEGLAGVTSKTGLTGGDAVLMKQYIESGQALAGNLVLDAVSKAVATNEV
                     NAAMGKICATPTAGSAGVVPGVLFSLKNRLQLNRQDMLNFLLTSGAFGFVVANNASIS
                     GAAGGCQAEVGSASAMAAAAIVEAAGGSPQQSAEGFAICLKNMLGLVCDPVAGLVEVP
                     CVKRNAAGASNAIVSADMALAGITSRIPTDEVIDAMYKIGQTMPSALRETGRGGLAGT
                     PTGQRLKQQIFGD"
     gene            complement(15700..16365)
                     /gene="sdaAB"
                     /locus_tag="PTC28_000425"
     CDS             complement(15700..16365)
                     /gene="sdaAB"
                     /locus_tag="PTC28_000425"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent
                     subunit beta"
                     /protein_id="HDK5715744.1"
                     /translation="MKYKSVFDIIGPTMVGPSSSHTAGAVRIGLVARDLFGKQPERAD
                     IYLYGSFMETYKGHGTDVALVGGLLGYDTDDDRIVTSLETAKEAGMRIHFIEMSEERS
                     HPNTAIIDMTDGVKNISVEGVSIGGGKIEIVAINGFPLAISGNYPTLLVFHQDTFGTI
                     GKVANILGDDGINVGSMQVSRKEKGDQALMTCELDDEVNDKILDAIRQVPGVVTVSLM
                     GDN"
     gene            complement(17348..19012)
                     /gene="fakA"
                     /locus_tag="PTC28_000426"
     CDS             complement(17348..19012)
                     /gene="fakA"
                     /locus_tag="PTC28_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid kinase catalytic subunit FakA"
                     /protein_id="HDK5715745.1"
                     /translation="MITKINGNLFADMIIQGAQNLSNNADMVDALNVYPVPDGDTGTN
                     MNLSMTSGREEVQAHLTAHIGNLGKAFSKGLLMGARGNSGVILSQIFRGFSKALEDKE
                     EIDVKQFAESFEAGVKTAYKAVMKPVEGTILTVAKDAGAAAVKKAQETDDCLEVMAYV
                     YEEAQKSLENTPNLLPVLKEVGVVDSGGKGLTLVYEGFLKAMKGEKIVAEAPKVDREA
                     FFNDEHDFHGVIDTDDIVYGYCTEMMVRFEADKAPFDEADFRQEMSQFGDSLLVISDD
                     EIVKVHVHTETPGEVFSFGQKYGELIKVKAENMREQHREVLRKEAAHQSKTKNTNDTT
                     QTVETAVITISMGDGITKLFKSMGATHVISGGQTMNPSTEDIVKVINDSGCKRAIILP
                     NNKNIQMASQQAADIVEVETIIIPTRTVPQGIAAMFHYDESADLATNEETMTAAIDDI
                     QSGAMTYAVRDTKIDGIEIEKGAFMGLVEDKIIASDRDKQTVLKDTLNHMLSEDSEIL
                     TIITGEEAESELTDWIETFVGEHYEDVEVEVQDGQQPIYPYLFAVE"
     gene            complement(19025..19399)
                     /locus_tag="PTC28_000427"
     CDS             complement(19025..19399)
                     /locus_tag="PTC28_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HDK5715746.1"
                     /translation="MALEITNDYGSIDISNEVIASIVGGKAVECYGIVGMASRQQVRD
                     GIAEILGHENYAKGIVVREDNGVLDVDMHIIVSYGVKISEVAQNVQSTVKYTLENTLK
                     LKVNSVNIFVQGVRFNNDGKDK"
     gene            19732..19920
                     /locus_tag="PTC28_000428"
     CDS             19732..19920
                     /locus_tag="PTC28_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HDK5715747.1"
                     /translation="MGKECFVTGRKASTGNRRSHALNSTKRRWNANLQKVRILVDGKP
                     KKVWVSTRALKSGKVTRV"
     gene            complement(19991..20632)
                     /locus_tag="PTC28_000429"
     CDS             complement(19991..20632)
                     /locus_tag="PTC28_000429"
                     /EC_number="2.7.6.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine diphosphokinase"
                     /protein_id="HDK5715748.1"
                     /translation="MNDKVIGLLCSDRELPEALFDIQRHQTWGGVDRGTMILLQHNIT
                     PIFAVGDFDSISESEREWVQSRIAIEPVPAEKADTDLALAVRTAVEQGYHHIQIFGAT
                     GGRLDHFMGAMELLQHPDFEAVRIQLIDQQNEIEYLTKGQHVLQNDTAYRYVSFMQGV
                     DQVVLSLKGFKYELCEQQLNRGETLTVSNEFDAKQGEVIVHRGGVYVMRSRDK"
     gene            complement(20632..21282)
                     /locus_tag="PTC28_000430"
     CDS             complement(20632..21282)
                     /locus_tag="PTC28_000430"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HDK5715749.1"
                     /translation="MTKVFPSLLSADFLNLKQELTKLEESGIDALHFDVMDGQFVPNI
                     SIGFPVLEAIRAATDLPIDAHLMIETPNDYVEAFAEKGVNKISVHMEGNPHIHRVVQN
                     IKKHGVEAGVVINPGTPVHALDAIIEEVDFVLVMSVNPGFGGQAFLPAAVDKIKQLDD
                     IRKNRQLDFKIEVDGGINDQTAKQVIEAGADWLVAGSYFFSRADYKEANQRLKGEL"
     gene            complement(21282..22157)
                     /gene="rsgA"
                     /locus_tag="PTC28_000431"
     CDS             complement(21282..22157)
                     /gene="rsgA"
                     /locus_tag="PTC28_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HDK5715750.1"
                     /translation="MKTGRIIKSISGVYRVDVNGEMFDAKPRGLFRKKQITPIVGDIV
                     DIDVETHASGYIQHVHERRNELKRPPVSNIDLLIVVMSAVSPDFSTQLLDRFLVIGHS
                     YGLQPSILITKKDLASKEEQAAIEEVLKYYEKIGYQTQFIGKDDDVAEVFQHWAPGLA
                     VLSGQSGVGKSTFLNRYAPSLALETNEISQSLNRGKHTTRHVELYPREQGHIADTPGF
                     SALDFDHIEKEDLRDYFIDIAELGAYCKFRDCYHINEPRCHVKAMLDAGKLPAFRYDH
                     YVQLYNEISNRKVRY"
     gene            complement(22339..23607)
                     /locus_tag="PTC28_000432"
     CDS             complement(22339..23607)
                     /locus_tag="PTC28_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HDK5715751.1"
                     /translation="MAKKLPKDTGLDNTLKMINEAYTYVPKRLEKFGTKAFETRALGM
                     KPIVVISGKAAAELFYDNDKISRKGTLPKRIVHTLFGKGAIHTTEGKVHVDRKALFMS
                     LMTEKNLKYLRELTRNYWFMHTERMQNKDEVNVYQEAGLILTKVGFRWAGLKQTDEQA
                     AQNAEDMNTMIDSFSGLGQSLKGYREAKKARARVEQFLQEQIEAVRVGQQYAEPGTAL
                     YEFAHWKDLNDQPMDPHLCAVDLMNIVRPLVAVNRFVSYGVKALIEFDQERKKLQVTN
                     DPNYAYKFAQEVRRIFPFVPFLPGRLKKTVEFDGFKLKKGTLTVLDIFGTTHDPELFE
                     NPYQFNPDRFDNWDGSPFDLIPQGGGDFYTNHRCAGEWMTVIVMEETIQYFANKIDFV
                     VPAQDLSVKLSQFPGKVTSGTMIKNVYPRI"
     gene            complement(24367..26373)
                     /gene="pknB"
                     /locus_tag="PTC28_000433"
     CDS             complement(24367..26373)
                     /gene="pknB"
                     /locus_tag="PTC28_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Stk1 family PASTA domain-containing Ser/Thr
                     kinase"
                     /protein_id="HDK5715752.1"
                     /translation="MIGRLIDDRYELKQILGGGGMSNVYVAMDTILNRQVAVKLIHIP
                     PNEKQATIQRFESEVQNTTILTHPNIVNVLDVGEEVDFFFLVMEYIEGPTLADYIKAN
                     GPLKPEKALYFIEQILSGIRHAHERGIVHRDIKPQNVMIDRNQTLKIVDFGIAKALSE
                     TTMTQTNHVVGTVQYLSPEQAKGEKTGERSDIYSIGIVLYEMLTGHPPFSGETAVSIA
                     IKQIQEAVPNVTDTRRDVPQALSNVILKATEKDQSHRYRSVSEMAHDVMSTLDPTRQN
                     EAIYEVDGTATKTVPINKNALKAEQAKQGQAVDETAQIPIVTPEKQPQGQPKPKPQPA
                     YYSPPPKRSGRKKWIFGVILLLLLGSLFIFMGAAMTGDKYSQVPEVLGKSRAQAEKLL
                     KDNKLTVGDVTYDYSDRYSKDQVMTVDPEEGSKVEQESSVDLVISKGQRVEAMPNLVG
                     MTKQDAERRLKELGFTHVTFTTAYTKNNIEKGHIESQSIQPGQNVAVTQDKVEVTESL
                     GKRQVYVGDYTNKDIDDVKAELEEKGLVVKIEKERSDRRVKKHHIINHSPKKTNVEEG
                     DTVSFIVSTGEKEDDEDSDSAVKAYSETVNIPYTGENDKPQKVEVFITDKNDNGQSPA
                     ETFNITRDTPQTMQFVIEKNKSAKYVIKVDGKTVARKTIDFDDF"
     gene            complement(26370..27113)
                     /locus_tag="PTC28_000434"
     CDS             complement(26370..27113)
                     /locus_tag="PTC28_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000888494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HDK5715753.1"
                     /translation="MLNAEFFSVAGDFRENNEDAGGVFYNKTEQQFLVLCDGMGGHQA
                     GEVASQFVVDALQERFEAENYIEPEQAEAWLKHQLQIVNRDLYDQAQQNPEYHGMGTT
                     CVCALVFDHHIVVANVGDSRAYLTNGRTMDQITIDHTFVNQLVMLGEITEEEAFVHPR
                     RHIITKVMGTNRFVTPDIFTKRTQFYQYLILNSDGLTDYVKPYQLHELLNEGKTIQEI
                     GDDMLAVAEEQEAKDNVSFILAEIAGEPV"
     gene            complement(27120..28214)
                     /gene="rlmN"
                     /locus_tag="PTC28_000435"
     CDS             complement(27120..28214)
                     /gene="rlmN"
                     /locus_tag="PTC28_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002435140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HDK5715754.1"
                     /translation="MITAEKKKKNKFLPDFEKQSIYSLRFDELQGWLKENGQQSFRAK
                     QIYEWLYDKRVDSFEEMTNLSKALRQLLADHFTITTLATVVRQESRDGTIKFLFELQD
                     GYTIETVLMRHDYGNSVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVSQVLTVQKA
                     LDETDERVSSIVIMGIGEPFENYDEMMDFLKIVNDDHSLNIGARHITVSTSGIVPRIY
                     DFADESLQINFAVSLHAANNEIRSKLMPINRAYDVDKLMEAIQYYQEKTKRRITFEYG
                     LFGGVNDQLEHARELAKLIKPLNCHVNLIPVNHVPERNYVKTPKDDIFKFEKELKKLG
                     INATIRREQGADIDAACGQLRAKERQAETR"
     gene            complement(28220..29521)
                     /gene="rsmB"
                     /locus_tag="PTC28_000436"
     CDS             complement(28220..29521)
                     /gene="rsmB"
                     /locus_tag="PTC28_000436"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HDK5715755.1"
                     /translation="MVTVRELSLMTIEAVLKDGAYSNLKMNEMLQTYPLNPADRGLYT
                     ELVYGTIKRKLTLDYYLKPFVKTKIKGWVRRLLWMSLYQFLYLDKVPTHALINEAVNI
                     AKKRGGAQTGNTVNAILRQMTSQPLPDITAIKKQPERLSIQYSIPTWIIKHWLTHFGA
                     DTTEAIAANLLLPGTQTVRVNRTQITVDEAIEQLRAEGFDVQSDTHIDVCLHVSGHGV
                     MTSELFQKGLISIQDKSSMFVAEYMELQPGDAVLDSCSAPGGKACHMAEILNDQGTVL
                     ATDVHAHKIQLIDHNIRKLHLTGIRAMQHDATQPYDQQFDKVLLDAPCSGLGVLRHKP
                     EIKYVITPQDVKGLVDLQLRIIDNVSKHLKAGGTMVYSTCTIEQLENDNVIYTFLKSH
                     PDFEFDPIEDPRTHEPVKTLQLLPQDMHADGFFITRVRKKG"
     gene            complement(29522..30454)
                     /locus_tag="PTC28_000437"
     CDS             complement(29522..30454)
                     /locus_tag="PTC28_000437"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020363823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HDK5715756.1"
                     /translation="MSKIIFMGTPDFSTAILEMLIDTEEVIAVVTQPDRPVGRKRVLT
                     PPPVKKVAVAHDIPVYQPEKLSGSAELETLLQTECDLIVTAAFGQLLPESLLEHPKFG
                     AVNVHASLLPKYRGGAPIHQAIIDGEAETGVTIMYMVKKLDAGDIISQQAIPIEDKDN
                     VGTMHDKLSRLGTELLKETLPSIINGTNDRTPQDEALVSFASNIQREDERIDWTQDAR
                     TIFNHIRGLSPWPVAYTTFEDKNMKLYEAQFVKGQSGRPGEIIDVTKKHIIVGTGSDD
                     AIALTEIQLAGKKRMSVAQFLSGFQTSLVGKELI"
     gene            complement(30447..30932)
                     /locus_tag="PTC28_000438"
     CDS             complement(30447..30932)
                     /locus_tag="PTC28_000438"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HDK5715757.1"
                     /translation="MIRKIKTHMHPILRKKAAPVTDFDAHLKDLIQDLEDTLYDAEGQ
                     ALAAPQIGVSERVAIVDMEQDGLLQLINPEVIAQSDETATELEGCLSVPGRFGEVTRS
                     RMITVRSYDLNGNEVEMTAYDDIARMILHVIDNLNGILFVDMMDREISNAELEAYLED
                     E"
     gene            complement(31189..33597)
                     /gene="priA"
                     /locus_tag="PTC28_000439"
     CDS             complement(31189..33597)
                     /gene="priA"
                     /locus_tag="PTC28_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HDK5715758.1"
                     /translation="MIAQVIVDVASKSVDKRFDYAIPADLENIVQPGVRVIVPFGPRK
                     IQGYVMRCVPDEEAEYDLEKLRPILEVKDIQPELTTELVQLSEWYSRYFLSKRISILE
                     AMLPSAIKAKYSKAFKLKEDADLPDEVVAYFNNEGLYYYKDAQQDENIEQLMPYLKEG
                     YIEAVTILSQNTTKKKRRAVRVVSTEMAEAYLETAQKKQKQYEVLVFLLDERHRDVLL
                     QELLEMAFSTSAINSLEKQGVIEKYDAIVERNPYEGRVFEKEQKRELTPEQQVAYDTL
                     LHSVRQQQAETFLLHGVTGSGKTEVYLQIIEDVLTQGKEAMMLVPEIALTPQMVLRFK
                     RRFGDEVAVLHSALSNGERYDEWQKIRDGRARVSVGARSSVFAPFKNLGMIIIDEEHE
                     STYKQEDYPRYHAKDIAEWRSRYHQCPLVLGSATPSLESYARAEKGVYTLLSMPSRVN
                     QQPLPDVEILDMREELANGNRSMFSARLVEAIEQRLARKEQVVLFLNRRGYASFMLCR
                     DCGHVPQCPNCDISLTYHKSSDQLKCHYCGYQEQAPFQCPNCESEHIRQMGTGTQRVE
                     ELLQQQFPDARTIRMDVDTTTKKGSHEKLLKQFGEGNGDILLGTQMIAKGLDFPNITL
                     VGVLNADTMLNLPDFRSSERTFQILTQVAGRAGRHEKKGEVIIQTYNPDHYAIKDVQQ
                     NDYLNFYQKEMQYRKLGQYPPYYYLINFTITHEKTKEVLQAATHIHQILLQHLTDKAF
                     ILGPSPSVIPRINNEYRFQILVKYKSEPSLIHALTYLDDYYHEMFVKNKLGLKIDINP
                     YMMM"
     gene            complement(33594..34802)
                     /gene="coaBC"
                     /locus_tag="PTC28_000440"
     CDS             complement(33594..34802)
                     /gene="coaBC"
                     /locus_tag="PTC28_000440"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HDK5715759.1"
                     /translation="MMKNILLAVTGGIAAYKAIDLTSKLTQGGYDVRVMLTEHAQQFV
                     TPLSFQAISRNAVYTNTFLEENPAEIQHIALGDWADAIVVAPATANIISKLSHGIADD
                     MVTTTLLATTTPKFMAPAMNVHMFENPRIQANIQTLIDDGYHFIEPGEGFLACGYVAK
                     GRMAEPLEIKAVIDRQGQKNAEKIQSAYFRDKKVLVTAGPTIETIDPVRFVSNRASGK
                     MGYAIAEALQKLGAEVTLVTGPTSIEAPRHVEVVQVTTAEDMFQAVRQRFKQQDIIFK
                     TAAVSDYTPVDPLPHKMKKQNGDVTVTFKRTQDILKYLGEHKTTQKLVGFAAETQNME
                     SYAQDKLARKNADVIIANNVGDTSIGFSSDNNEVSLYFKDGTFETLQKGPKKKLAFQI
                     LSILESRWDV"
BASE COUNT         9569 a         7970 c         6014 g        11796 t
ORIGIN      
        1 gtgctggtcc agattctgaa agttcttgtt tttctctaca tttgttgtca ataaattttg
       61 catctctcat catctccttg ttatcagcat tatttttgta aaattcagta atagaatatc
      121 cgttttcagt caaaacgtca atcgcaactt tactgtatat tgtttagatc taacctcatt
      181 caactagatt aatagcatcc atggaaatgt tgactcttca tctgaattct cgaaataaac
      241 gaagcatctc gctcccctgc tttttcattc tgacaaccat agtccatatt gtgaacctag
      301 gcgagactcc tgagggataa agttcaaaac aaataccaat ctttaaactt tgaaagtggc
      361 taatggttat cgcagtagct gtctgacttc tacctaatgt ccacctcaat caagccgaag
      421 tgagttgagg ctagtcccct aaaaacgcga gccttaaagt tcacaatttg caaaattctc
      481 acctaaccct caccctctcc tccatgtaaa gtaaacaagg aagcaacaag tagaaatttc
      541 gtcattttat tttcaaacga aacgtctctc gaaatactcg aagcatctcg ctcccctgct
      601 ttttcattcc gaagaccaca ccccagattg tgaacctagg cgagactctt gagggatcag
      661 ctgagccgga aaatccacca acgctttcac tgaatggcac agttcgaaca aagcgttggt
      721 tagttgaagg atcagcccct aagaacgcga gccttaaggt tcacaatctg caagatcccc
      781 aaaatttaat gttaccgtaa tgtcaaaaac cgcaaaaaac accgagatgc ttcacacatc
      841 ccagtgttct caaaattaaa atggcaaatt catacctttt aacatatttt gcaattgcgc
      901 ttgcttgcct tttttacctt taccgccacc tgtaaactgc ttcatcatct tcttcatatc
      961 attaaactgc ttcaataaac ggtttacttc ttgtaatgtg cgccctgaac ctgccgcaat
     1021 acgacgtttt cttgaaacat tcaatttatc tgggttttcg cgttcttcag gtgtcatgga
     1081 ttgaataatc gccttaatat gatcaatttg tttgtcgctc atattgagtt tgtcgagccc
     1141 tttcatcttg ttcatacctg gaatcatttt cataatgtca tctagaggtc caagattttt
     1201 cacttgatcg agttgttcta aaaagtcttc taatgtaaat gaagaagtac gcattttttt
     1261 ctctaaatct cttgcttttt cttcatcgac atcttgttgt gctttttcga tcagactcaa
     1321 tacatcaccc atacctaaaa tacgtgatgc catacgttct gggtggaaca actctaaacc
     1381 atctaacttt tcactcatac ctacaaattt gataggtttt tctgtgacgg cacggataga
     1441 aagtgctgca cccccacgtg tgtccccatc taatttcgtt aatgtcacac ctgtgacgtc
     1501 gagctgttgg tcaaacgatt ctgcaacatt gactgcatct tgacctgtca tggcatcaac
     1561 cacgagcatg atttcgtcag gcttcgaaat ttctttgact tcttgtaatt cgttcatcaa
     1621 tgcttcgtca atgtgtaaac gacctgctgt atcgataatg acaaagtcta aatgttcagc
     1681 tttggcatgt tgtaacgcgt tttggacgat ttgttgtggt ggcacttgat cgccttcgct
     1741 atatacaggg atgtcgattt gtttcccaac tgtttgtaat tggttaatcg ctgctggacg
     1801 gtagatgtca cctgctacca gtaacggctt tttgttatac tttttgcgca tgagcaatgc
     1861 aagtttccct gctgttgtcg ttttaccagc accttgcaag ccgaccatca tgacaacggt
     1921 aggcggtttt ttcgccatcg taatcgacgt gttgtcgcca cccattaatg ttgtcagttc
     1981 ttcttgtacg attttgatga cttgttgccc tggtgttaat gacttcatca catcagatcc
     2041 taatgcacgt tctgaaactg tgttgacaaa gtttttaacg actttaaagt taacgtccgc
     2101 ttcgagtaaa gcaagacgta cttcacgcat cattgctttg atatcagctt cagtcacttt
     2161 acctttacct tttattttct gcattgttgc ttgcagtcga tcggataatc cttcaaaagc
     2221 cataaagtga ccctccttat tctagttctt caagttcttg gatatattgt tgaatgtgtt
     2281 ctggttcatg aatatggttt cgtatttgtt gaaaaatctc ttgtctgcgg gtaaaacggc
     2341 gataaagtcc taacttttgt tcgtaatcct ctactaaatc accagttctt cttatgttat
     2401 catacaccgc ttgacgactc acttcaaatg tctctgcaat ttcactgagc gcatagtctt
     2461 ctaagtaaaa aagacgtaaa tagttacgct gtttttcagt gagtagtgac tgataaaagt
     2521 caaaaagata attcattcgg acggttttaa ttaaatcatc gtcatggtgc atcgtctatc
     2581 cctcattttc aggttgattt tccgctactt ctggtacatt ttgttcaatc atatctgcaa
     2641 ataaaccgta aacataactt tctgcgttga acggttgtaa gtcatccagt ttttcaccta
     2701 agccaacgta tttcactgga atgtgcaatt catttcggat ggcgaggacg ataccgcctt
     2761 tagctgttcc atcaagtttc gttaagacga tacctgtcac gtctgtcact tctttaaatg
     2821 ctttcgcttg tgccaatgca ttttgtcctg ttgtcgcgtc gagtgccagt aatacttcgt
     2881 gaggtgcatc aggtactgaa cggctaatga cacgtttcac tttttcaagt tcgttcatta
     2941 agttttgttt attttgtaaa cgacccgctg tatcacaaat taaaatgtcg acacctttat
     3001 ttttcgcagc gttgatcgca tcgtacatga cagcggctgg gtcagaacct tcaccttggc
     3061 gaatgacatc aacaccaaca cgttgccccc atacttcaag ttgctcaatc gcacctgcac
     3121 ggaatgtatc tccagcagct aacatcactt ttttaccttg tgcttgatag cggtgtgcaa
     3181 gtttaccgat agttgtcgtt ttaccaacac cattcacacc caccattaaa atgacattca
     3241 agcggccgtc ttcaatattc atctcttctg acttttcatc gtcttgttga taaatttcta
     3301 caattttttc gacgattgct tcacgcaaat cttctgtttc agtaatattg cgacgttttg
     3361 cttccatgcg taattcatcg accagttcca tcactgtatt gaaaccgacg tcggcttgga
     3421 ttaacatttc ttctaatgct tcaaagaaat cttcgtcgac tttacgataa tgtgctaata
     3481 aattgtttaa ttgattttgg aagttttcac gtgatttttc gagtccttca cggaatttcg
     3541 caccaatttt ttgtgattcg agctcttcaa attcctcaat cgacatcaag ccatcatcaa
     3601 attcatcttc aaccgaagtt aaatcattgt cttgatggac agtttcacta ggagcagtat
     3661 gttgtgtgcg ttcaggttcc tggtgttcaa cggcatcttg ttgcaaatct tgttcgagtt
     3721 gttgttcatt atcaggtttc gcaaatttat cctttaatcg tttaaaaaag ctcatattat
     3781 gcttgttcct ccttcaatac ttcatctatc gtatttaaat tcacacttac gagtcgtgac
     3841 acgcccattt cttgcatggt cacgccgtaa agacaatcac acatttccat tgtaccttta
     3901 cggtgggtaa tgacaatgaa ttgcgtctct ttcgacaatg ttttcaagta ggtcgcatat
     3961 cgaatgacgt tcgcctcatc cagtgctgct tcgacctcat ccaatataac aaacggtgcg
     4021 gaccttactt tcaatatcgc aaacagtaag gcgatggcac ttaacgcacg ttcgcctcca
     4081 cttaataacg acaagtgctg tagtttttta cctgggggtt ggactttaat atcaacacca
     4141 gctgttaagt aatctttttc tgtcaatatg agttccgctt gaccgccacc gaataaattt
     4201 ttgaacacgc tcgcaaagtg gtcttggatc gcatggaatg tcgtactgaa acgttccgcc
     4261 acttctgcat ccatttcttg aataatttgt tctaacgtcg ctttggcttc tcttaaatca
     4321 ttgcgttgct ccgataagaa tgtataacgt gcagacactt cttcatattg ctcaatcgca
     4381 ttcaaattca catggcctaa ttcatcaatc gacatttgtg taagcttcac tttttggcgt
     4441 aatgcatcaa tattcgcatc agctaacgaa taagacgatt tcgcatgttc gaatgtcata
     4501 tgatattttt cattcaaatg tttcaacgct tgatcaatga ggacatctag ccttgattgt
     4561 gcagacttga tattttgata ctggttttca atttctaaca atttttgatg aatggactct
     4621 aacgcttgtt cattcgattc aatcaagtct tcaatatctt gacgctgttg tcgtaattgt
     4681 cgctgttgtt cgagatgacg tgttttagcg tcttgatatt ttgtaatttg tgcttgaatt
     4741 ttttcaagtg tcgaacggtc attgacttca tctgaattaa tcaatgccaa ttgatccgtt
     4801 agtttttgtt gttgtgcatc gatttgttgt tgttcttttt ccatacgttt gagctgttgt
     4861 tgttgtgtct tgatacgttc aacgacgaca gcgagatcag acttgtattg atgaagttgt
     4921 tgttgtaatt gtgatgcttg tgcttgagac actttgcgct gttctgtcat tgctttaatt
     4981 tgttgctcca tttgttcgag ctgttccgca atttcaactt ggcgcgcttg tttatctttt
     5041 aatgtcgctt cacttttatc actttgatac ccatcatttt tttcaaactc aaactcttca
     5101 ttttcatttt ttaaacgttg ttcgatttca cgataacgat catgttctaa tgacaaatcg
     5161 tgaagtgctt gtttatacgt gttgaaatct tgttgtgctg tgacatattg ttcactcaac
     5221 gtatcttgtt gtgatttttg attttgacaa aacagttcca attgcttcgt cttttcgaga
     5281 tatgtctcta actgggcttg cagttgttgc agttcatctt tttgtccgag taggctttga
     5341 cgttgttgtg taccgccccc agtcattgaa ccacctggat taacgacatc accttctaat
     5401 gtgacgatgc gcgtttgata ttgaatcgcg cgggccatgt cattcgcatt tttcaagcca
     5461 tctacaatta aagtacggcc taataaattg tcgataatcg ctttgtatgt cgtatcaact
     5521 tttaccgctt cactagcgag cgtcacaaat cccgtcattt gttgggctgt ttggacgacg
     5581 cgtgggtcta atgtttttgc tttaatgacg ttcaacggta aaaatgtggc gcgccctaac
     5641 tttttcgttt tcaaaaattg aatcgcttgg cgggctgctg cttcatcaga tacgatgaca
     5701 tattgcatgc tcgcacctaa agccgtttcg atcgctttcg tatattttga agggacatcg
     5761 atttgttgtg ctactgcacc atgaatccct tgtaattgtt gagctttcgc ttttaaaact
     5821 gctttaacac cttgataaaa gctactcaaa tcgtcttctc tcattttcat cgtttcaatg
     5881 cgtgctttca acttatcatt gtaacggtaa gcttgataca gttgtgattc tgcctcggtt
     5941 tgttcagatt tcgcttttga taatgatgcc tcaatttgtt tgcaatcatt ttcgattttt
     6001 gtcatttgcc gctttttttg ttgttgacgt tgctcgatgt cgtgcatatg ttgttgggca
     6061 tcttttaact gcgcatatgc ttcagtcaat ctagaatcga tacgagattg tttcgcttta
     6121 tgttcttcaa tcgttttcgt caaaaatcga atgtcattgt taatatccgc ttgttcagtc
     6181 attaattgat aatacgtatc ttttaaggtc tcaacatctt cttccatcgt ttcgtcagac
     6241 tgatacaatt gtccttcgag cgtttgaatg tgttgattta attgttggcg cttttctttt
     6301 aattgactca gcgttttttc agtttctgcc acatcttgat ctaattgttg ctgatgttgt
     6361 gcaatagacg cttgttcttc ttcaatacgc gcattagatt gtgattgatt cttttgacgc
     6421 tcttcaatca attgatattg ccctgtcaac ttctccactt gttctgtcgt ttcaatcagt
     6481 tgttggttga ctttttctaa ttgctgatcg acttcaaaac gttcaccttt tgccttttgc
     6541 atcgtatgtg agatttgcga ctttttatga tgcgtatcgg cttgctgact ctttaattca
     6601 ttcaatgccg tgtcatgttc cgcaatttgc gtttgatgcg acacgatgtc atgcaccgtt
     6661 acacgaatat cactttcttt taaaatgtca ctcaactgca aatactcttt cgcaatcgcc
     6721 gcttcttctt ttaacggttc cacacgacct tctaaatcgt acaaaatgtc ttccacacgc
     6781 gttaaattgt cttcggtatg ggacaacttt tctaatgatg cttctttgcg ctttttatat
     6841 ttcaatactc ctgcagactc ttcaatgatt tgacggcgat cagtcggttt cgcgttgagc
     6901 acttcatcga cacggccttg tgaaataatg ctgaacgctt ctttaccgag tccagaatct
     6961 aaaaagagct catgtatatc tttcagacga cgacgttcat tattgacata aaattcactg
     7021 tcaccattcc ggtaaaggcg tctcgttacg ataacttctg tcgcatcaaa attcaacaaa
     7081 cccttgctat tatcgagttt caactgtact tcagcaaagt tttgagcatt gcgatgctgt
     7141 gcaccagaaa agataatgtc ttccatttta ctgccacgca atgaacgtgc ggattgttca
     7201 ccgagcaccc atttaatcgc atcagtaatg ttactctttc cactaccatt tggcccaacg
     7261 atggcagtga cacctttgtc aaattgaatt tgagtggctt ccgcaaatga tttaaatccg
     7321 tatgcatcaa ttgactttaa ataaaccata ttctactcct tatgcgtcat caataagtat
     7381 gcttgttcgg ctgctttttg ttcagactct tttttcgtac gaccttcacc tcgagagacg
     7441 gcttccccat ttaataagat ttcggaggtg aacgttttgt tgtgtgcagg tccctcttct
     7501 tttgcaaccc gatacttaat cacacctaaa tagttttgat gaacatattc ttgaaatttt
     7561 gttttaaaat cgacgacacc gatcagttgg cgtcctttaa cgtgtgggaa aatgactgct
     7621 tctgcaaatt gccacactgc ttcaagccct tggtctaaat acagtgcacc aacaaatgct
     7681 tcaaagacat ccgcaactaa cgatggacgt gttctcccac ctgttttttc ttctccttta
     7741 ccgagcaaga taagcggcat taaattgata tgttgcgcga aaacaacgag cgagggttca
     7801 caaacgatat tcgcacgcat tttcgtcaat tctccttcag gcaacttagg gaatgcatcg
     7861 aataaataac gcgatacagt taattcaagt accgcatctc ctaaaaactc taaccgttca
     7921 ttatgttcag tacggtccat gttaaagtca ttaataaaac tagaatgtga aaaagcttgt
     7981 tgatacagtg acatattatc atacgtcaaa ttcagtgctt tcattttttt cgcaaaattc
     8041 tcttgaaact cagcgatgag cgtttcctta cgcacttttg tcatgccatc atttcctcct
     8101 ttatttcttt caatcagata catggacatt ttcaatttga ttatccgacc atcctcagtt
     8161 gcatatcaca ttgttaacac gaacatggga tactacaaac tgtgacgacc gctatagttg
     8221 aatacgctct caaactttta gtgagcacat cacattgtca tcgtgttcaa taaaagtgag
     8281 acccatcttt tcaaaatcca tacccattac cattatacgt gatatccaaa ccgaaaccta
     8341 tccattcact aaaacttctc atactttaaa cttcatatca ggataggatt gggatataaa
     8401 aaattggatg ctattgatgc aatatttttg ttaaacttcc cttcctatga tttatgactt
     8461 tagattgcct tcatggcttc gcgttcctag gggctagccc tacaactaac tcacgcttga
     8521 ttaaactatt acatttgatg aggcgttagt ggattttggg agcagtacag aaatctcatg
     8581 tgtaacaaag agttcgtcgt actgcccccg aaagactgac tagacttctc aaaaggaacg
     8641 cattgagaag tcagacagct actgcgataa atagtaccca ctaaataaat atcagaaatc
     8701 atatttaagt ctttgattca tcccctcagg agtctcagcc ttctgagcaa tcttaaatca
     8761 aatatcgtga actgaaggca agtttatgaa gtcaagaaaa caatagcatc aatttttatc
     8821 ccattcaccc tcattttccg accgtattaa agtcattaat gaatcagcaa tctatgtatg
     8881 gcttgaggct taatttttcc aagccccatt cctcggtata cacagaaaaa tatagtaaag
     8941 gagctgagga aacttaatgt cccagctccg ataatcatta tttgtcaagt gtattaatgt
     9001 aattaacagc gtctcccact gtgttgattt tttcggcttc ttcatctgga atttcagtac
     9061 cgaattcatc ttctaattcc attactaact ctgcgatatc aagtgaatca gcgcctagat
     9121 cgtctttgaa agatgcatct tcagtgactt tgtcagcgtc tacgcctaaa cggtcaacga
     9181 tgatgtcttt tactttatcg aagttttcca cgttgtttca cctccttata aaataatgct
     9241 ttgtttatgt aacgcatgtt gcgcgttttt ttatcgaatt gaagtactcg actgttatat
     9301 tttgccattt tatcgactta aatacaaccc atttcaatga agttcaccgc gttctacata
     9361 catttcatta acatcttatg tgcgttgaac aaaaatctct gttttcactc aagatttcat
     9421 aatcgatacg ctgtcatgat tattccatgt gcatgccacc attgacatga atcgtttggc
     9481 cagtaatata tgctgcttta tctgaagcta aaaatgctac tgtatgcgcg atgtctgtat
     9541 cttgaccgaa acgacctaat ggaatttgtg ttttcatcgt ctctttcaag tcatcgttta
     9601 acgcatcagt catatctgaa acgataaagc ctggcgcaac agcgttgaca gtaatgttac
     9661 gtgatgccaa ttcgcgcgct gcagttttcg tcatgccaat aacgcctgct ttagacgcca
     9721 catagttaat ttgacctggg ttcccaactg caccaacaac acttgttaag ttgataatgc
     9781 gtccagcacg ttgtttcaac atttgtggcg ttgctttttg gatacagtta aagacacctt
     9841 ttaagtttgt atcaatcaca tcatcccact catgttcttt cattctcatg agtaagttgt
     9901 ctctcgtaat acctgcgttg ttcacaagca cgtcaagtga accgaaagtt ttgacgattt
     9961 ctttaatcat ggctttcact tcatcaccat ttgcaacatt tgcttgcata gcaacacttt
    10021 cgacaccttt atttttaatt tcttcaacaa cggcctctgc tttttcttgg ttacccgcgt
    10081 agttaacgac aacattgtat ccttcttcag caagttgtaa ggcaatacta cggccaattc
    10141 cacgtgaagc acctgtcact aatgcaactt tactcatttc caatccattc ctttacatct
    10201 tcgagcgttt gaatcgaagt tatttttaca tctctactca tttttttaac taaacctgat
    10261 aatactttgt tcggaccgac ttcaatgaaa tgatccacac cttgatcgat taaccattga
    10321 acagaatcaa taaattgcac cggcgaatac aattgtttca ccatttgttg tttaatcgtc
    10381 tctgcgtctg tttcaggtct tgcatgaaca ttttgtacga cgggggttgt cgcatcatgc
    10441 cactcaaatt gattgatata cgttttaaat tcatcttcaa tgacttgcat catagacgaa
    10501 tgaaacggtc ctgaaacgtc taatggcatc actcttttcg caccaagtga tttaccttca
    10561 ctcactaaac gatccacagc aactttatga cctgacacaa cgatttgtcc tggtgcatta
    10621 atattcgcag gctcgacgat agcatcttct gttgagattt gatcacaaat ggctttcact
    10681 tcatcaaatg ataaacctaa tactgcagcc ataccaccaa caccatttgg aaatgcttgt
    10741 gccatcaatt cgccacgttt acgaacgatt tgtacggcat cttcaaactt taaaacaccg
    10801 ctcatcacaa ggcttgagta ttcgcctaaa ctgtgaccaa tcgtgtaatc agcagtcgat
    10861 tgacccatcg cagcataaag tgccatgcta tgtgttaaca gtgcaggttg tgtattttca
    10921 gtttgcccta acacttgatt gggatcttca aacatcgtct caagtaaatt aaatggcatg
    10981 tgttcagcgg ctgcttctaa aattttcgtc gccgcttcat cttgttgata caagtcttgt
    11041 gccatcccta ccttttgtgc cccttgccca gggaacatca acacagtttt actcatcagt
    11101 gtcgcctacc tttgctctca tattttcaac aattttcgtt tcacccgcaa ttttcgcttg
    11161 acgaatcgct gaataaaacg cctttgcatt tgaactgccg tgcgctttga ccacgatacc
    11221 gtccaatcct aacaacactg aaccgccata ttcggaatag tccaactgtt tcgcgatacg
    11281 tttaatgtca ttttttaaga cgagtgctgc taatttattc ttaaggctcg ataacaaatc
    11341 atttttcaaa attttaccga atgatttggc agtgccttct aggtttttca atacgatatt
    11401 acctgtaaaa ccatctgtca caattacgtc agcttcatct tccataatcg attttgcttc
    11461 aatattgccg gtaaatttga attggtctgt ttcagacatt aaacgaaatg cttcttttgt
    11521 taagctattc ccttttttat cttctgtccc aatattcaat aatgccactc tcggttctgc
    11581 aatatctctt aacttttgcg cataaatatg accgagtacc gcattttgat acaaatgatc
    11641 cgctttcgca tcagcatttg caccgacgtc taaaaatacg acacctttac cgctcaccgt
    11701 cggcaaagta acgactaacg ctggtcgcgc cacccctggc aaacgcccta caataaagag
    11761 gcctgccgac atgagtgcgc ctgtgttacc tgctgagaca catccgtctg cttctccatt
    11821 tttcactgct tccgccatac ggaccataga gctgtctttt ttgcgtttaa tggcacgcac
    11881 tggctcatct tccattgaaa tctcttcagt tgtatgacgt atttcaactc ttggatggtt
    11941 caaatgacat tgcttttcat caccgaaaag aataatctcc aaatcatcga aatcttgtac
    12001 cgctttttca acagcttcaa gtacgatgtg aggggcatcg tcgccaccca tcatatctac
    12061 agctagtttt accatcttat tcatcctcgc ttatgtaata cattttaaat aggccttcaa
    12121 agactttttc ttgcgcaacg aatgacgtca cactcatttc ataatattta tcatcatgaa
    12181 attggacttc cgcttctgca acaacgacat cacccaattg tacaggtttg acaaagtgga
    12241 tgtgactttc tttcgttagt acggatgcgt gtttcacaat cgcgacacat aatgaattcg
    12301 cttgtgcaaa caacacatgt ccacgtgcaa tcgcatttcg cgtaaagaca tctttttttg
    12361 aaatcgtcat aattgacttc ccagataaat taggttctag tgacacgata tcacctataa
    12421 tgtcttgatc ttcaagggca ctaatatttt gatattgatc ttttgctaca tttttcacgc
    12481 gttctcgaag ttcaggaatt tgtaactggc ttcgatcaag gcgtatcgtc tgtatgctca
    12541 cttcaaacat gtcactcaaa gcttgatcag tgataaatgg attttgctgg atggtagttt
    12601 caataagtgt ccgtctttca tctttcgtct ttttcacatc atcgccaccc aaatttagta
    12661 ccaagtctta atcgactcca ttttatttta acatgtttac agcacagttc aaaatgattt
    12721 catgtcacat caacacgcga atatcaggtc atttgactac cgattaatca aagctttggt
    12781 acaacacttt atcttcaata aatgtccgca accgttcaaa ttcattcgta aaaaacacac
    12841 ctgactgcat taattgagct gcttcatctc tcgctacttc taacatgcga taatcctcga
    12901 ccaaattgcc cactaaaaag tcaggcaaac cactttgttt cacaccaaag aaatcgccgg
    12961 gcccccgcat ttctaaatct ttctcactca attcaaaccc gtccgtcgtt tgcgtcataa
    13021 tttgcatacg ttcgattcct gtttctgttt taggagaagc aatgagtaca caataacttt
    13081 gaaaatcact acgacctaca cgaccacgca attgatgtaa cgtcgacaac ccgaaacgat
    13141 ccgcgtcata aatcatcata aaagtcgcat tgggcacatt cacaccgact tcaacaacgg
    13201 ttgttgcaac aaggacatcg agttcatgtg cactgtaccg atgcatgacg tcatcttttt
    13261 catctgcgct cattttccca tgtaataaac cgattcttcg ctgtggtaac gctacttgta
    13321 aattttcata cagtgcaatc gcgttttgga cgtcttctaa atgttccgag ctttcgataa
    13381 gcggtgaaat gacatacgcc tgtctccctt gtcgcaactc gcgttccata tgttcaatga
    13441 cttgggcgta ttgctcatgt ttcacccagt aagtttcaat cggtttacgg ccttttggta
    13501 aacttttaat tgaggagaca tccatttcac caaatactga aatggcgagc gttctaggaa
    13561 tcggtgttgc agtcataaag agaacattgc tgagtgcacc tttttcacgt aacttttgac
    13621 gctgttgcac cccaaaacga tgctgttcgt ccgtaatcac aagacccaca ttatgaaacg
    13681 ccacatcatc ttgaatcaat gcatgtgtac caatcaagca atcaatttcg ccatttgcta
    13741 accgttcaag caagagctga cgttttttcc ctttgacaga accagttaac agcgctacgt
    13801 tcatatacgg tccaaataat tcgaccaaac tttccgcatg ctgttccgct aaaatctctg
    13861 tcggtaccat caatgctgat tggtatcctg ctgttttcat cgcatacata caaatcgccg
    13921 ctacgaccgt tttaccggag cccacgtccc cttgtaataa acggtgcata cgtattggtg
    13981 ctttcaaatc acggaaaatt tcattcacac tttgtttttg cccctctgtc agctcaaaag
    14041 gcaacgtctc tataaacgtt ttaacttgct gaatatcata ttgtacttct atcgcttctt
    14101 ctgacatttt ttccatacga ttgagccact gcatacgaag ctcaaacata aaaaattctg
    14161 taaaagcaaa cgtccggcgt gcacgtaata acgattgctg atctttcgct tcatgaaggg
    14221 catgtatagt atcatgtaac gtttctaact tgtattgttc acgcatcgaa gccggcaacc
    14281 attcatgaat tgtaatgtct tgtagtgttt gttgaatcat atcgcgcaac gttttttgtt
    14341 ttaacccttc tttcacacga taaacaggtg taaactgcgc atccgctaac tgcgacagat
    14401 caaaaaacat tttctgacca ttaatttctt gtttacggcg agaccatttt cctttaataa
    14461 cgaccgtctc atgcaactga attttatttt tcaaataggg ttgattgaag aacactgctt
    14521 tgaccgcaat cccattaatc atgagatgaa ctgtcaattt tgaacgattt cttccaaaaa
    14581 aagcgacagt gggggttgaa tatacttccc cgcgaactgt cacatgagat tcatcttcag
    14641 ccgtcgtcaa atcaaccaac gtattatctt cataacgcgt cggtaaataa agcaccaaat
    14701 cttgaatggt atgaatattc atttcgttta aaatggccaa ccgtttagga cctaaccctt
    14761 tgatgtcctt aagcgcataa ggattttcaa tgaggtttaa ctttgtcatt attaatcacc
    14821 aaaaatctgt tgttttaatc gctgacctgt tggtgtaccc gctaagccac cacgacctgt
    14881 ttcacgcaaa gcagatggca tcgtttgacc aattttatac atcgcatcaa tgacttcatc
    14941 tgttggaatg cgagatgtaa tacctgccaa tgccatatcc gctgacacaa tcgcattgga
    15001 cgcgcccgcc gcattacgtt ttacacaagg tacttccact aagcctgcca ctggatcaca
    15061 tacgagacct aacatatttt taagacaaat cgcaaaacct tctgcagatt gttgcggtga
    15121 tccgccagct gcttcaacaa ttgccgcagc tgccattgca cttgctgaac cgacttctgc
    15181 ttgacagcca cctgccgcac cagaaataga cgcattgttc gctacaacaa aaccaaaagc
    15241 acccgacgtg agtaaaaagt tcaacatatc ttgtcggttt aattgtaatc tatttttaag
    15301 tgaaaataaa acaccaggaa caacgccagc agaacccgca gtaggtgttg cacaaatttt
    15361 ccccatcgct gcattcactt catttgtcgc tactgcttta cttactgcat ctaacactag
    15421 attacctgct aatgcttggc cgctttcgat gtattgtttc attaagaccg catcgccacc
    15481 cgttaatcct gttttagaag tgacccctgc taatccttct tcaagtgcat tttccatcgt
    15541 ttgtaaatta cgatccatgt gcgtatacac ttcttcagct gtcatacccg ttacagccat
    15601 ttcttgctct aacataactt cataaatcgc tttattctcc gcttcacatc tctcaattaa
    15661 ttctttgaca cttttaaaca ttttcacgtc tgtcatcatt taattatccc ccatcaacga
    15721 aactgttacg acacctggaa cttgtcgaat cgcatctaaa atcttgtcat tcacttcatc
    15781 gtccagttca cacgtcatta acgcttgatc acctttttct tttcgtgaca cttgcatact
    15841 gccgacgtta ataccgtcat cacctaaaat attggcaact ttaccaatcg taccaaatgt
    15901 atcttgatga aatacgagta atgtcggata gttaccacta atggctaatg gaaaaccgtt
    15961 aatcgcgaca atttcaattt taccgccacc aatcgatacg ccttcaacag aaatattttt
    16021 tactccatcg gtcatgtcga taattgctgt gtttggatgt gaacgttctt cactcatttc
    16081 aataaagtgt atgcgcatgc cggcctcttt tgcagtttcg agactcgtta caatgcgatc
    16141 gtcatctgtg tcatagccga gtaatccccc gactaatgcg acgtctgtac cgtgcccttt
    16201 gtatgtttcc ataaatgagc cgtatagata gatgtctgcc cgttctggtt gtttgccgaa
    16261 tagatctctt gcgacaagac cgattctgac ggcacctgct gtatgtgaag atgacggacc
    16321 aaccattgta ggtccgataa tatcaaatac gcttttatat ttcatttttg ctccccccgt
    16381 ttttgaccat caaatgtgtc tctttattat atcaatgttc tttgtagaat gtaatttttg
    16441 ttgtttttta ttatttgtgt ttgattgtgt tgtttttcct atatggtttt gaacatttgg
    16501 tgtttgtgat acgtttggtt ttgatgcggt gtttttgata catttcaggt tataatgtcg
    16561 cgttggtttt gacattgtag tgtattggat acgttggttt tgacattgta gctcacagaa
    16621 tactattcct ttaacatttc agttatttgg attgcttgcc accctcacgt tcctaggcgc
    16681 tcgcttcaac tcaattcggc ttaattgtgg tgtacatggg gtggttgccg aattggattt
    16741 tgggagcagt acagtaatct catgtgtaac aaagatttcg ttgtattgcc cccgcaaggc
    16801 tgactgggct tctcaaaagc aagcgtattg agaagtcaga caactactgc gataaccatt
    16861 aaccactttc aaggtttaaa gacatgcatt tgtattgaac tctatgcctc aggagtcttg
    16921 ggtggctttg gcaatctctg gcatcgtttt tgagccgtca tgatacatgg aaggcatgtc
    16981 cacttgttgc ctaagaacag ttcaatagac ttaatgccta caccattaca cttctgtacc
    17041 aagaagcacc tttgaaaatc aaaagcagtc cattttaact acagtttcaa aaaggcatat
    17101 gctcattttc aatacccttt tctagaatta tcaagacaca cgatgcaaat caaaaaatat
    17161 actaccattt actaacatta agtaaacatc aagtggtgag ttgatttctg ccctaggaat
    17221 gcgaaagtta agttcgtcaa tctgataaca acgctctact ccgtaatacg gaaaacccaa
    17281 cgaccattaa aaagcatcaa acaacgatga tacgtcgtct gatgcttgtt aggttctatc
    17341 aatcaaacta ttctactgca aataagtatg gataaattgg ctgttgaccg tcttgtactt
    17401 caacttcaac gtcttcatag tgctcaccta cgaatgtttc aatccaatct gttaattcgc
    17461 tctccgcttc ttcacctgtg ataatcgtta aaatttcact atcttcgctt aacatgtgat
    17521 ttaaagtatc tttcaatacg gtttgcttat ctcggtcact tgcgatgatt ttatcttcta
    17581 caagtcccat gaaagcacct ttttcaattt cgataccgtc aattttcgta tctctcacgg
    17641 cataagtcat cgcacctgac tggatgtcgt caatagctgc agtcattgtt tcttcgttag
    17701 tcgctaggtc cgcgctttca tcataatgga acatggctgc gatgccttgt gggacagtac
    17761 gtgttggaat aatgattgtt tcaacttcaa caatatctgc tgcttgttga ctcgccattt
    17821 gaatattttt attattcggt aaaataatgg cacgcttaca accactgtcg ttaatcactt
    17881 tgacaatgtc ttcagttgaa gggttcatcg tttgaccgcc actaatgaca tgtgtcgcac
    17941 ccattgattt gaacagcttt gtaatgccgt cacccattga aatggtaatg accgctgttt
    18001 ctacagtttg tgttgtatca tttgtatttt ttgttttaga ttgatgtgct gcttctttac
    18061 gtaaaacttc acggtgttgt tcacgcatat tttcagcttt aactttaatc aattcaccgt
    18121 acttttgacc gaatgaaaag acttcacctg gtgtttctgt atgaacatgg actttcacga
    18181 tttcgtcatc actaattacc aataatgaat ccccaaactg gctcatttct tgtctaaagt
    18241 cagcttcatc aaacggtgct ttatctgctt cgaaacgcac catcatttct gtacaatagc
    18301 catagacgat atcatctgta tcaataactc catgaaaatc gtgttcatca ttaaagaaag
    18361 cttcacgatc gactttcggt gcttctgcga caattttttc acctttcatc gctttaagga
    18421 aaccttcata aactaatgtc aggcctttac caccgctatc tacaacgccg acttctttca
    18481 gcactggtaa taaattaggt gtattttcaa gtgacttttg cgcttcttca taaacgtacg
    18541 ccatcacttc caaacaatcg tctgtttctt gcgctttttt aacagctgct gcaccggcat
    18601 ctttagcgac agtcaaaatt gtcccttcta ccggtttcat gactgcttta taagctgttt
    18661 taacaccagc ttcaaaactt tccgcgaatt gtttgacatc aatttcttct ttatcttcta
    18721 atgcttttga aaatccgcgg aaaatttgag atagaataac accagagttg cctcgtgcgc
    18781 ccatcaataa tcctttagaa aaagctttac ctaagttccc aatatgagcc gtcaaatggg
    18841 cctgtacttc ttcacgtcca gaagtcattg acaagttcat atttgtacct gtatccccat
    18901 caggcacagg gtaaacattt aatgcatcca ccatgtccgc attatttgat aaattttgtg
    18961 ccccttgtat aatcatgtcg gcaaatagat taccgttgat cttcgttatc atgcaaatat
    19021 cctcctattt gtctttcccg tcattattaa agcgcacgcc ctgaacaaaa atattcacag
    19081 agttgacttt aagttttaat gtattttcta aagtatattt cacagttgat tgcacgtttt
    19141 gcgcaacttc tgaaattttc acaccgtaac ttacaataat gtgcatatct acgtctaata
    19201 caccattatc ttccctcact acgatccctt tcgcatagtt ttcatgtcct aaaatttcag
    19261 caataccgtc tctcacttgt tgacgtgaag ccattccaac aataccataa cattctacag
    19321 ctttaccgcc tacaattgac gcgattactt catttgagat atcgatactt ccataatcat
    19381 ttgtaatttc taaagccatc cttttcgcct cctatttaca aattcactct tttatatcat
    19441 ctatcactat atttattaaa attgattacc aatcattaaa aaacactctg atttctaata
    19501 atattatctt actatatctg acgagtcgtt gccaatatac gcatgtgcac gattacattt
    19561 tctcatattt cagttaatca cagtttcaaa ttatatcaga aagtgcataa cacaaaaagt
    19621 gatttatgaa aatataacct aactttttat tgcatgtcaa ttattaatgt ggtatattac
    19681 cttagtatgt agtagaaaag tgtatttgta tttcttaaag gaggtacgat gatgggtaaa
    19741 gaatgtttcg taacaggacg taaagcttca acaggtaaca gacgttcaca cgcgttaaac
    19801 tcaactaaac gtcgttggaa tgctaactta caaaaagtta gaatccttgt tgatggtaaa
    19861 cctaaaaaag tttgggtttc aactcgtgct ttaaaatcag gtaaagttac tcgcgtataa
    19921 ttaacaacat atatcgaaat aaaaaacagg tctttatgtg ggagacctgt ttttttattg
    19981 atactcattt ttacttatct cgacttctca tgacatagac gccacctcga tgaacgatga
    20041 cctctccttg ttttgcatca aattcgtttg agactgttaa agtttcgcct cgattcaact
    20101 gctgctcgca caattcatat ttaaagcctt ttaatgaaag tacgacttga tccacccctt
    20161 gcataaacga aacataacga taagctgtat cattttgtaa tacatgctga cctttagtta
    20221 aatattcgat ttcattttgt tgatcaatga gttgaatacg caccgcttca aaatcagggt
    20281 gttgcaggag ttccatagcg cccataaaat gatctaaacg tccacctgtt gccccaaaaa
    20341 tttgaatatg atgataccct tgttccactg cagtgcgtac agcaagggct aggtctgtat
    20401 cggctttttc ggctggtacg ggctcaatgg caatgcgtga ttgtacccat tcgcgttcac
    20461 tttcagaaat tgaatcaaaa tcgcctaccg caaaaattgg cgtaatattg tgttgtaata
    20521 aaatcatcgt ccctcgatct acgccccccc atgtttgatg gcgttggata tcgaacaatg
    20581 cttctggcaa ttcgcgatca ctacagagca agccaatgac tttatcattc attacagttc
    20641 accttttaaa cgttggttcg cttctttata gtctgctcgg ctaaagaaat acgaacctgc
    20701 tactaaccaa tctgcacctg cttcaatgac ttgtttcgct gtttgatcat taataccacc
    20761 gtcgacttca attttaaagt caagttggcg attttttcgt atgtcatcta attgtttaat
    20821 tttatctacg gcagctggaa ggaatgcttg accgccaaaa cctggattca cggacatgac
    20881 taagacgaaa tccacctcct caatgatcgc atctaaagca tgtacaggtg tccctggatt
    20941 gatgacaacg cccgcttcaa caccatgttt cttaatattt tgaaccactc tatgaatatg
    21001 tggattacct tccatgtgca ctgaaatttt gttcacacct ttttccgcaa atgcttcgac
    21061 atagtcattc ggcgtctcaa tcatcaagtg tgcatcaatc ggtaaatccg ttgccgcacg
    21121 aatcgcttca agcactggaa aaccaattga aatattaggt acgaattggc catccatcac
    21181 atcaaaatgt aatgcatcaa tcccactttc ttctaatttt gttaattctt gttttaagtt
    21241 taaaaaatca gctgataata aagaaggaaa aacttttgtc attagtatct tacctttcga
    21301 tttgatattt cattatataa ttgtacgtaa tggtcataac ggaatgctgg caattttcct
    21361 gcatctaaca tcgctttgac atgacaacgc ggttcattaa tatgataaca atctctaaat
    21421 ttacagtatg cccctaattc ggcaatatcg ataaaatagt ctcgcaaatc ttctttttca
    21481 atatgatcaa aatcgagcgc actaaagcca ggtgtgtcgg cgatatgacc ttgctcgcgt
    21541 ggataaagtt cgacatggcg cgtcgtatgc ttgcctcggt tgagtgattg tgaaatttca
    21601 ttcgtctcca acgcaagact cggcgcataa cggttgagaa atgtcgattt ccctacccct
    21661 gattgtccac tcaatacggc aagtccaggt gcccaatgtt gaaatacttc agccacatca
    21721 tcatctttac caataaactg tgtttgataa ccaatttttt cgtaatattt gagaacttct
    21781 tcaatagctg cttgctcttc ttttgatgca agatcctttt tcgtaatgag tatactcggt
    21841 tgtaacccat atgaatgacc aatcacgaga aagcgatcta acaattgtgt tgaaaaatca
    21901 ggagacaccg cactcatcac gacaatgagt aaatcgatat tgctcactgg cggccttttt
    21961 aattcattac gacgttcatg tacgtgttgg atataacccg atgcatgtgt ttccacatca
    22021 atatccacaa tatctccaac gataggcgta atttgctttt ttctgaagag tccgcgtggt
    22081 tttgcatcaa acatttcacc gttgacgtca acgcgataga caccgctgat tgatttaata
    22141 attcgacctg ttttcaaatt cacacctctt ttttgttaat atcctcaatt attatatcaa
    22201 agccttatag acaatgatat gatttaatac ttgcaacaat ttttgacatt aatggatgcc
    22261 atctcattta aaaaagagac tgagaaaaca atgccccagt cccatctcgc tttatttcag
    22321 cctattcata cacacaaatt aaattcttgg atatacattt ttaatcatcg tcccacttgt
    22381 cactttacct gggaattgac ttaacttcac agacaagtct tgtgcaggta ctacgaaatc
    22441 aattttattc gcaaaatatt gaatcgtttc ttccatcaca atcactgtca tccactcacc
    22501 cgcacaacga tgattcgtat agaaatctcc gccaccttgt ggaattaaat caaacggact
    22561 gccatcccaa ttgtcaaaac ggtctgggtt aaattgatat ggattttcaa ataattcagg
    22621 gtcatgtgtc gtcccaaaaa tatccaatac cgtcaatgtg ccttttttca gtttaaaacc
    22681 gtcaaattca accgttttct ttaatcgacc tggtaaaaat ggcacaaatg ggaaaattcg
    22741 tcgcacttct tgagcgaatt tataagcgta attcggatcg ttagtcactt gtaacttttt
    22801 acgttcttga tcaaattcaa tcaatgcttt cacaccatag ctcacaaagc gattcaccgc
    22861 aacaagtgga cgtacaatat tcattaaatc tactgcacat aagtgagggt ccatcggttg
    22921 atcattcaaa tctttccaat gcgcaaactc atataaagcc gttcctggtt ctgcatattg
    22981 ctgacccact cgcaccgctt cgatttgctc ttgtaaaaat tgttcaacac gtgcacgcgc
    23041 ctttttcgct tcacgatacc ctttcaaaga ttggccgagc ccgctaaacg aatcaatcat
    23101 cgtattcata tcttccgcat tttgcgctgc ttgttcatct gtttgtttta aacctgccca
    23161 gcgaaaaccg acttttgtta aaatcagtcc cgcttcttgg tagacgttaa cttcatcctt
    23221 attttgcatg cgttctgtat gcataaacca ataatttctt gtcaattcac gtaaatattt
    23281 caaatttttc tcagtcatca aagacataaa aagcgcttta cggtcgacat gcactttacc
    23341 ttctgtcgta tgaatcgcac cttttccgaa taaagtatga acaatacgtt tcggcaacgt
    23401 cccttttctt gaaatcttat cgttgtcata aaatagttct gccgctgctt taccactgat
    23461 tacaacaata ggtttcatcc ctaatgcacg cgtttcaaaa gctttcgttc caaacttttc
    23521 tagacgctta ggtacataag tataagcttc gttgatcatt ttaagcgtat tgtctaatcc
    23581 cgtatctttt ggtaatttct ttgccacttt aaatcccccc gaaaaacaat tttttatctt
    23641 ctcccccatt atacgtggtt aacagcgaaa tgtaatccca aaacccaact ttcaaaagca
    23701 ttcttagcaa attaatctgt tttcttaatc acagatatca gaaagccatt ttcaacataa
    23761 aaaacaaccg tcaaaacgaa ccccacgtcc attttcacag ttgataaatg atatgctatt
    23821 aaatgtcaac aatctccaat atctcaccca cacataatag tggcgaaaga tgataaattt
    23881 atttttaccg agcacaacgc aatctatgtc tctctataca aaaaaacaga ttgctagaac
    23941 gatgcttcct aaaaacaaaa tagccttatt gattaacaat cctggcaaga ctcctgagtg
    24001 gttatgttaa aggctaaata atgttactta acttcaaaag tagttactgt ttaacgcagt
    24061 agctgtctga tttctcaacg cgttcgcttt tgagaagtct agtcagcttt gcgggggcag
    24121 tacgacgaaa tctttgtgac acatgagatt tctgtactgc tctcaaaatc caattcggct
    24181 accaccaaat gtatactata atcaagccga attgagttga aggacccacc cctaggaacg
    24241 cgagccttag attgcatcaa taaggctaaa tcaatataac aacgaagcat cgttcagcaa
    24301 tctgtaggat taaaacacac atgtcaccga aatactaaaa acctaacaaa aacaacactt
    24361 catcttctaa aaatcatcaa aatcaatcgt ctttctcgcc actgttttac catccacttt
    24421 aatcacatat ttcgccgatt tatttttctc tatcacaaat tgcatcgttt gcggcgtatc
    24481 tcgtgtaata ttaaacgttt cagcagggct ttgaccatta tcatttttat ctgtaataaa
    24541 aacttctact ttttgaggct tatcattttc acctgtataa ggaatgttca ccgtctcact
    24601 gtacgctttc accgctgaat cactgtcctc atcatcttct ttctcacctg tagatacgat
    24661 aaagctcacc gtatcgccct cttctacatt tgtcttttta ggcgagtgat tgataatatg
    24721 atgttttttc acacggcggt ctgaacgttc tttttcaatt ttaacgacaa gtcctttttc
    24781 ttctaattct gctttcacat catctatgtc tttgttcgta taatcaccga catatacttg
    24841 acgtttaccg agtgattctg tgacttcaac tttatcttgc gtcactgcca cgttttgacc
    24901 tggctgaata ctttgcgact caatatgacc tttttcaata ttattcttag tataggccgt
    24961 tgtaaatgtc acatgcgtga agcctaattc ttttaatctt cgttcggcat cttgtttcgt
    25021 catacctacc aagttcggca tggcttccac acgttgacct tttgagatga caaggtccac
    25081 actgctttct tgttccacct tactgccttc ttctggatcg acggtcatca cttgatcttt
    25141 actgtaacgg tcactgtaat catatgtgac gtcacctaca gtcaatttat tatcttttaa
    25201 tagtttttcg gcttgagctc tcgatttgcc gagcacttca ggcacttgac tatatttatc
    25261 tccagtcatc gctgcaccca taaaaataaa caagctacct aataaaagta ataaaatcac
    25321 accgaaaatc cattttttgc gtcccgagcg cttcggtggc ggactataat aagcaggttg
    25381 tggtttcggc ttaggttgtc cctgaggttg cttctcaggc gtgacaattg gaatttgtgc
    25441 cgtttcatca acagcttgac cttgtttcgc ttgctcagct tttaacgcat ttttattgat
    25501 gggtacagtt tttgttgctg taccgtccac ttcgtatatt gcttcatttt gacgggtcgg
    25561 atctaaagtc gacatgacat cgtgcgccat ttctgatact gaacggtaac ggtgactttg
    25621 atccttttct gtggctttta aaataacatt acttaacgct tgaggcacat ctcttcgcgt
    25681 atctgtcacg ttcggcacag cttcttgtat ttgtttaatt gcaatactca ctgccgtttc
    25741 gccactaaaa ggcggatgcc ccgtcaacat ttcatacaat acaataccga ttgagtaaat
    25801 gtcagaacgt tcgcctgttt tttcaccttt tgcttgttca ggcgataagt attggacagt
    25861 gccaacaaca tgattcgttt gcgtcatcgt tgtttcactg agcgctttcg caataccaaa
    25921 gtctacaatt tttaacgttt gattcctgtc aatcatgacg ttttgcggct taatatcacg
    25981 atgcacaatg ccacgttcat gtgcatgacg aatcccactt aaaatttgct cgataaaata
    26041 gagcgctttt tcaggcttta acggcccgtt cgctttaatg taatcggcta aggtgggccc
    26101 ttcaatatat tccatcacga gaaagaaaaa gtcgacttct tcacccacgt ctaaaacatt
    26161 gacaatattt ggatgtgtca gtatcgtcgt gttttgaact tcgctttcaa agcgttggat
    26221 cgtcgcttgc ttttcgttcg gtggaatatg aatgagtttc acagcgactt gacgattcaa
    26281 aatagtatcc attgcgacat aaacattcga catgccaccg ccaccaagaa tttgcttcaa
    26341 ctcgtagcgg tcatctatta aacgcccaat catacaggtt cacctgcaat ttcagcgagt
    26401 ataaaagaaa cattatcttt tgcttcttgt tcttcagcaa ctgcaagcat gtcatcacca
    26461 atctcttgaa tagtcttacc ctcattcaag agttcatgca attggtacgg cttcacataa
    26521 tctgttaaac catcagaatt taaaatcaga tattggtaaa attgcgtacg tttagtgaaa
    26581 atatcaggtg tcacaaaacg atttgtaccc atcactttcg taataatgtg tcttctcgga
    26641 tgtacgaaag cttcttcttc ggtaatttca cctaacatca cgagctgatt gacaaatgta
    26701 tggtcaattg taatttggtc catcgttcga ccatttgtta aatacgcacg tgaatcgcct
    26761 acatttgcga caacaatatg atgatcaaat actaatgcac atacacacgt cgtccccatg
    26821 ccatggtact caggattttg ttgggcttga tcgtataaat cacggttgac gatttgaagt
    26881 tgatgtttca accaagcttc tgcctgctca ggctcaatat agttttccgc ttcaaacctt
    26941 tcctgtaaag catctacaac aaattgagat gcaacttcac ctgcttgatg accacccata
    27001 ccatcacata atactaaaaa ttgttgttct gttttattgt aaaacacgcc acctgcatct
    27061 tcattgtttt cacgaaaatc ccctgctact gaaaaaaatt ctgcatttaa cattatgttc
    27121 tacctcgttt ctgcttgacg ttcctttgct ctaagttgtc cacacgctgc gtcgatatct
    27181 gcgccttgtt cacgtctaat tgtagcatta atgcctaatt tttttaattc tttttcaaat
    27241 ttaaaaatgt catctttagg cgttttaaca taattacgct ccggaacgtg gttcactgga
    27301 attaaattca catgacaatt taatggttta atcaattttg ccagttcacg cgcgtgctca
    27361 agctgatcat tcacaccgcc aaataagcca tattcaaacg taatacgacg ctttgttttt
    27421 tcttgataat attgaatcgc ttccatcaat ttatccacat cgtatgctcg gttaatcggc
    27481 attaattttg aacgaatttc attattcgct gcatgtaagc tcaccgcaaa gttaatttga
    27541 agtgattcat cagcaaaatc ataaattctc ggtacaatac ctgatgttga aactgtaata
    27601 tgacgcgcac caatgtttaa actgtgatca tcgttcacta ttttcaaaaa gtccatcatt
    27661 tcatcatagt tttcaaacgg ctcaccaatc cccataataa caatagaaga gacacgttcg
    27721 tctgtttcat ctaacgcttt ttgcacagtt aagacttgtg agacgatttc acccgcttct
    27781 agattacgct tcagtccgcc taatgttgac gcgcaaaacg tacagccaat acgacagccc
    27841 acttgtgtcg tcacacatac agaatttccg tagtcatgac gcattaatac cgtttcaatc
    27901 gtatacccat cttgtaattc aaataaaaac ttgattgtac catcgcgact ttcttggcgg
    27961 acaaccgttg ccaaagtcgt tatcgtaaag tgatccgcga gaagttgacg taatgctttc
    28021 gataaatttg tcatttcttc aaaagaatct acacgtttat cataaagcca ttcgtaaatc
    28081 tgcttagccc ggaaactttg ttggccattc tctttcaacc aaccttgcaa ttcatcaaat
    28141 ctaagtgaat aaatcgattg tttttcaaag tctggcaaaa atttattctt ctttttcttt
    28201 tctgcagtaa tcatattgtc taccctttct tccttactct cgttataaaa aagccatctg
    28261 catgcatatc ttgtggcaat agttgcaatg ttttcactgg ttcatgtgtc cgagggtctt
    28321 ctataggatc aaattcgaaa tcaggatgtg actttaaaaa agtataaatc acattatcgt
    28381 tttctagttg ttcaatggta catgtcgaat aaaccattgt tcccccagct ttaagatgct
    28441 ttgaaacatt gtcaatgatg cgtaattgta agtctactaa tcccttaaca tcttgtggcg
    28501 ttatcacata tttaatttct ggtttatgtc tcaaaacacc tagcccacta catggcgcat
    28561 cgagtaaaac tttgtcaaac tgctggtcgt atggttgtgt tgcatcatgt tgcatcgcac
    28621 gaatccctgt taaatgcaac ttgcggatgt tatggtcaat gagctgaatt ttatgcgcat
    28681 gtacatctgt tgcgagcact gttccttgat catttaaaat ttcagccatg tgacacgctt
    28741 taccgccagg tgcactacag ctgtctaaca cggcgtcacc cggttgtaat tccatatatt
    28801 cagcgacaaa catagagctc ttatcctgga tactgatcaa acctttttga aacagttcag
    28861 acgtcatcac gccatgacct gacacgtgta gacaaacgtc aatatgagta tctgattgaa
    28921 cgtcaaaacc ttcagcgcgt aattgttcga tagcttcatc tactgtgatt tgcgtacggt
    28981 tcacacgtac agtttgtgtt cctgggagaa gcaaattcgc cgcaatcgct tcagttgtat
    29041 cagctccgaa atgcgttaac caatgtttaa taatccaagt tggtatgctg tactgaattg
    29101 aaagtctctc aggttgcttt ttaatcgctg tgatgtctgg taacggctgc gatgtcattt
    29161 gacgtaaaat cgcattgacc gtattgcctg tttgtgcacc accgcgcttc tttgcgatat
    29221 tcacggcttc gttaattaaa gcatgcgtcg gcactttatc taaataaagg aattgataca
    29281 gactcatcca taacaaacga cgcacccaac ctttaatttt tgttttcacg aatggtttta
    29341 aataataatc taaagtcagt ttgcgcttaa ttgtcccata cacgagctct gtatataaac
    29401 cgcgatcagc aggatttaat ggatatgtct gtaacatctc attcattttt aaattactgt
    29461 aagcgccgtc tttcaacact gcttcaattg tcattaaact taattcacga actgtgacca
    29521 tttagatgag ttcctttcca actagagatg tttggaaacc acttaaaaat tgtgcaacag
    29581 acattctttt cttacccgct aattgaattt ctgtcagtgc aatcgcatcg tctgaacctg
    29641 taccgacaat gatatgtttt ttcgtaacat cgattatctc acccggacgc ccagattgac
    29701 cttttacaaa ttgcgcttca tataacttca tatttttatc ttcaaatgtc gtgtaagcca
    29761 ctggccatgg agataaacca cgaatatggt tgaaaatcgt gcgtgcatct tgtgtccaat
    29821 ctatgcgttc atcttcacgt tgaatattgg atgcaaagct cactaacgct tcatcttgtg
    29881 gtgtacggtc gttcgtccca tttataattg atgggagcgt ttctttcaat aactccgtac
    29941 caagtctact caacttatca tgcatagtcc ccacattgtc tttgtcttca ataggaatcg
    30001 cttgttgtga aatgatatca ccggcatcta actttttcac catgtacatg attgtcacac
    30061 ctgtttctgc ttcaccatca ataatcgctt ggtgaatcgg tgcaccgccg cgatattttg
    30121 gcaataatga cgcatgtaca ttgaccgcgc caaattttgg atgttcaagt aatgattcag
    30181 gtaataattg accaaacgcc gctgtcacga ttaagtcaca ttccgtttga agtaatgttt
    30241 caagttctgc tgagccactt aacttttcag gttggtacac aggaatatcg tgtgcaaccg
    30301 caaccttttt cactggaggt ggcgtgagta cccgtttacg tcctacgggt ctgtcgggtt
    30361 gagtgacaac tgcaatcacc tcttcagtgt cgattaacat ttctaaaatt gcggttgaaa
    30421 aatcaggtgt ccccataaaa ataatcttac tcatcttcta aataagcctc caattctgca
    30481 tttgaaattt ctcgatccat catatctaca aataaaatgc catttaaatt atcaatgaca
    30541 tgtaaaatca tccgagcaat gtcatcataa gccgtcattt caacttcatt gccatttaaa
    30601 tcgtaacttc gaaccgtaat catacgactg cgcgtcactt caccaaaacg ccctggcaca
    30661 ctcaagcacc cttcaagttc cgtcgctgtt tcatctgatt gggcaatgac ttcaggattg
    30721 atcagctgca acaaaccatc ttgctccatg tcgacaattg cgacacgctc actcacacca
    30781 atttgtggtg cagctaacgc ctgaccttct gcatcatata acgtatcttc caaatcttga
    30841 atgagatctt tcaaatgtgc atcaaaatca gttacaggcg ctgctttttt cctcaaaatc
    30901 ggatgcatat gtgttttaat ttttctgatc atatccttca tcgcccctca cgaaaattta
    30961 tcattatatt atagcttatt ctcacctaaa atgcgatagt ctctcatcga catcataaca
    31021 aaaaacacat cattcatcat tatgcgtatg caaaaaaagg gacaaactac tcaatgatca
    31081 attaaaaatc tatcacatta agctatttgc ccttttgttg catgaatcat attcgattac
    31141 catatcactg tatcaaaaca ctggcatatg aatacttagt ccaatctatt acatcatcat
    31201 ataaggattg atatctattt taagccccaa cttatttttc acaaacattt cgtggtaata
    31261 gtcatctaaa tacgtcaatg catggatgag tgacggttca cttttgtatt tcactaatat
    31321 ttggaagcgg tactcgttgt taatacgcgg aataactgac ggtgacggcc ctaatatgaa
    31381 tgctttatct gttaaatgtt gcaacaaaat ttgatgaata tgtgttgctg cttgtaggac
    31441 ttctttcgtc ttttcatgcg tgattgtaaa gttaattaaa taatagtaag gcggatattg
    31501 tcctaactta cgatactgca tttctttttg gtaaaaattc aaataatcat tttgttgtac
    31561 gtctttaatc gcgtaatggt ccggattata cgtttgaatg atcacttccc cttttttctc
    31621 atgacgtcct gcacgtcctg cgacttgcgt caaaatttga aaagtccgtt cactcgagcg
    31681 aaaatcaggc aaattcaaca tcgtatctgc attcagtacg ccaacgaggg taatattcgg
    31741 aaagtccaat cctttcgcaa tcatctgtgt gcctaacaat atgtcgccgt ttccttcacc
    31801 aaactgtttc aataattttt catgactgcc ttttttggtc gtcgtatcaa catccatgcg
    31861 aatcgttcgg gcgtcaggga attgttgttg cagcaattct tctacacgtt gggtccctgt
    31921 ccccatttga cgaatatgtt cactttcgca gttcggacac tgaaacggtg cttgttcttg
    31981 ataaccacaa tagtgacatt tcaattggtc actcgatttg tgatacgtta atgaaatatc
    32041 acaattcgga cattgtggca catgaccaca gtcgcgacac aacataaatg atgcataccc
    32101 acgacgattc aaaaagagga cgacttgttc tttgcgcgca agtcgttgtt cgatcgcttc
    32161 aacgagacgt gctgaaaaca tggaacggtt tccatttgcc agttcttctc tcatgtctaa
    32221 aatttcaaca tcaggtaatg gctgttggtt gacacgtgac ggcattgaca ataacgtata
    32281 aacgcctttt tcggcgcgtg cataactttc caaacttggt gtcgcactgc ctaacacgag
    32341 tggacattga tgatatcgac tgcgccactc tgcaatatct tttgcatgat aacgcggata
    32401 atcttcttgc ttgtatgtcg attcgtgctc ttcatcaata ataatcatgc caagattttt
    32461 aaacggcgca aatacactcg aacgcgcgcc aacactgaca cgtgcacggc catcacgaat
    32521 tttttgccat tcatcataac gttcgccgtt cgacaaagca gagtgtagga cggctacttc
    32581 atcaccaaag cgtcgtttaa atcgtaatac catttgcggt gttaaagcga tttctggcac
    32641 gagcatcatc gcctctttac cttgtgtgag gacatcttca ataatttgga gatacacttc
    32701 tgttttgccg gaacccgtta cgccatgtag taaaaacgtt tcagcttgtt gttgacggac
    32761 cgaatgcagt aaagtgtcat atgcgacttg ttgttctggc gtgagctcac gtttttgttc
    32821 tttctcaaaa acacgtcctt catatgggtt gcgttccaca atcgcatcat atttttcgat
    32881 tacaccttgt ttttctaacg aattgatggc tgaagtagaa aatgccattt ctaataattc
    32941 ttgcaacaat acatcacggt gacgttcatc gagtaaaaat acgaggacct catactgctt
    33001 ttgtttcttt tgcgcggttt ccaaatacgc ttcagccatt tctgtagaca ccactctgac
    33061 cgcacgtcgc tttttcttcg tcgtattttg cgataatatc gtaacagctt caatatagcc
    33121 ttctttcaaa tacggcatga gctgttcaat attttcatct tgttgcgcgt ctttataata
    33181 gtacaaccct tcattattaa aatacgccac cacttcatca ggcaaatccg catcctcttt
    33241 taacttgaat gcttttgaat atttcgcttt aatcgcactg ggcaacatcg cttcaagaat
    33301 agagatgcgt ttcgataaaa aatagcggct ataccattca cttaattgga cgagttctgt
    33361 cgtcagttct ggctgaatat ctttcacttc taaaatcggt ctcaatttct ccaaatcata
    33421 ttccgcttct tcatccggta cacatcgcat gacgtaccct tgaattttgc gcgggccgaa
    33481 tggcacaatg acacgaaccc ccggctgaac gatattttct aaatcagcgg gtatggcgta
    33541 atcaaacctt ttatctacac ttttcgaggc aacgtctaca atgacttgcg cgatcataca
    33601 tcccatctac tttctaaaat tgataagatt tggaaagcca atttcttttt agggcctttt
    33661 tgaagcgttt caaatgtccc gtctttaaaa taaagtgaca cttcattgtt gtctgaacta
    33721 aaaccaatag acgtatcgcc cacattgttc gcaataatga catctgcatt tttacgcgcg
    33781 agtttgtctt gtgcgtagct ttccatattt tgtgtttctg cagcaaagcc taccagtttt
    33841 tgtgtcgttt tgtgttcacc taaatatttc aaaatgtctt gtgtacgttt gaacgtgaca
    33901 gtcacatcac cgttttgctt tttcatttta tgtggcaacg gatcaaccgg tgtgtaatct
    33961 gatacggcag cagttttgaa tataatatct tgttgcttga aacgctgcct taccgcttga
    34021 aacatatctt cagctgtcgt cacttgtacg acttcgacat gacgtggtgc ttcgattgac
    34081 gtaggtccag ttactagagt tacctctgca ccgagttttt gaagtgcctc tgcgatggcg
    34141 tatcccattt tccctgatgc tctgttcgat acaaaacgga cagggtcaat cgtttcgata
    34201 gttggccctg cagtaacaag cactttttta tcacggaaat atgccgattg tatcttttct
    34261 gcatttttct gaccttgtcg atcgatgact gctttaattt cgagaggttc cgccatacgt
    34321 cctttcgcta cgtaaccaca tgctaaaaag ccttctcccg gttcgataaa atgataacca
    34381 tcgtctatga gtgtttgaat attagcttga attcgcggat tttcaaacat atggacattc
    34441 attgcaggcg ccataaattt aggtgtcgtc gtcgctaata acgtcgtcgt caccatatcg
    34501 tccgcaatac cgtgacttaa ttttgaaatg atgttcgctg tcgcgggtgc aacgacaatc
    34561 gcatccgccc aatctcctaa agcaatatgt tggatttcag ctggattctc ttctaaaaac
    34621 gtattcgtat aaactgcgtt acgactaatc gcttgaaatg ataatggtgt tacgaattgt
    34681 tgtgcatgtt ctgtcaacat gacgcgcaca tcataacccc cttgtgtcag tttacttgtt
    34741 aaatctatgg ctttatatgc agcgataccg cctgttacag ctagcaaaat atttttcatc
    34801 atttccactc ctgttttttt cactcttaaa agcattataa tatatttaac gttttgtttc
    34861 atatgacgtt gctttttaga atcatagcat cgaacataaa aatttcagcg atttaaatta
    34921 ttatatttta aatcagatac gcttcattga ttattgttct gaattctaca cgattgtcat
    34981 tataaaatca cgctctatgg acttgtctca actcattttg gttcgattca aatatacatt
    35041 tgatggaatt cggattggat gtttaagcag tacagaaatc tcatatgtaa caaagatttt
    35101 gcagggttct gtatcaatat cggttagtga gacgataaca cattaagcaa cgtttttgtg
    35161 gttcagtacg ttttttatat tcacttataa acaccctaga aatcatttaa attcaattcc
    35221 taaaattcca gaaatttctg tcaccatact aataatgaaa tatgcttgta ttttacatta
    35281 tattcttata gccaaacact gaatttattt tgatggttct gttgcaaagt cgaaaaaact
    35341 gaataagta
//
LOCUS       DANHPA010000011        34553 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.011, whole genome shotgun sequence.
ACCESSION   DANHPA010000011 DANHPA010000000
VERSION     DANHPA010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 34553)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34553)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34553
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.011"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(221..1150)
                     /locus_tag="PTC28_000441"
     CDS             complement(221..1150)
                     /locus_tag="PTC28_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDK5715760.1"
                     /translation="MLSLLLILGLVAGAVIPVQTSINSRLSRFTQSSLYASAISFTVG
                     TLLLVILNFILNPHLLTAEAFGHYHFDYYWYVGGLMGVIYLTGNMILLPRIGASLTVV
                     TTITGQILMSMLIDTFGWFNVDVQALHVMKVLGIVLLLIGIILMNLQKNAKQLAQSSH
                     NGPWMLSGMIIGFTPPIQTAINSHLGQTLHSPFFASLVSFTVGASALIILTLMLHRHV
                     KIHATSEQHGPLKWWHFVGGALGVIFVTTNIILTPVIGVTFTLITVMVGQIIMGLLID
                     HFGLFGVPHRHITKQRLLGFMLIIIAIIIIQFN"
     gene            1363..1632
                     /locus_tag="PTC28_000442"
     CDS             1363..1632
                     /locus_tag="PTC28_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715761.1"
                     /translation="MKLKESCDILKEHEIVRVIDDHLFFINVNASSKLEEGQYVEVLN
                     PFKSYKTLARIDEVYEKYAICQKLGKFKIFYGDEVRIRPNYQSNV"
     gene            complement(1973..2188)
                     /locus_tag="PTC28_000443"
     CDS             complement(1973..2188)
                     /locus_tag="PTC28_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2922 domain-containing protein"
                     /protein_id="HDK5715762.1"
                     /translation="MNVKTLEITFLDALQKTFKLSLPNIKGTITKEVVQEEAEKLVAL
                     NVLKTMHGPVVKVAGAQVIDKSLIVLF"
     gene            complement(2204..2407)
                     /locus_tag="PTC28_000444"
     CDS             complement(2204..2407)
                     /locus_tag="PTC28_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1659 domain-containing protein"
                     /protein_id="HDK5715763.1"
                     /translation="MNINHLTLILTQTTTSAEGKPKKASRRFTQLKTDASHEDLKAFS
                     QMIEKLTGEQYDAIELMTSENIQ"
     gene            2550..3101
                     /locus_tag="PTC28_000445"
     CDS             2550..3101
                     /locus_tag="PTC28_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDK5715764.1"
                     /translation="MNCVDPIREMRDIHRMYDFLQSHSIRDYLFFKFAIHTGVKLVEL
                     LNLKVSQVMHDDGTIIEKWDVSQSQEVSVRIPNSLREELKAYIDAEALIKTDLLFRSK
                     RTQKGLSRQQAYRIINTAAQQLGLEHIGLTTLRKTFAYHAYESGISISMIQKYLGHQT
                     SHETMKFIGVPKKEMDTTIALNL"
     gene            3123..5513
                     /locus_tag="PTC28_000446"
     CDS             3123..5513
                     /locus_tag="PTC28_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000060776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4040 family protein"
                     /protein_id="HDK5715765.1"
                     /translation="MMLSGLLLILIVVMGALVISMQWQTTRLPHWIAMLAPIISSIVF
                     IFYAPQVLNHQQIVETIQWFPALDINLILRLDGLGLFFALLISLMGVAVFFYATRYLS
                     HQHDDLPRFYLYLVLFMFSMLGIVLSDNTIILYMFWELTSVSSFLLISYWYDSSESQK
                     GAVTSFMVTVFGGLAMLVGLIMLYFVTGTNVISEQLNQRHDIVGHPLFIPIMLMLLLG
                     AFTKSAQWPFHFWLPKAMAAPTPVSAYLHSATMVKAGIYLLLRYTMLLGLSDAYIYLV
                     TGVGLLTMIFGSMTALKQYDLKGILAYSTISQLGMIMSMVGLGGGIAQATDTHMIKIY
                     AYVLFAAIFHLFNHALFKGTLFMGVGLIDHETGTRDIRKLGGLRRRLPVTMVVMFAAS
                     LAMAGVPLFNGFISKEMFFESLIEAHHLSAFNVPLMIVIALVGWLASIFTFIYALYLI
                     KTTFFGELRIERHVHEPRLMILPATVLALCLPLIFIVPQWIGTHVITPAFRGVVHTEA
                     IVQTAPHLAQWHGFNLPLLMSVTVIVLGIVGVFSVDRLRKRFLSAQENALSVENIFHT
                     SYESLERVSGYGLRHLMNNRLNSYIIVTLLIYFTINIYGLIRAGVPELYDIKVTDYHI
                     FHILLLVTIMLIGFALIFIRQRLTMVILTGGIGYIVTLFFILMRAPDLALTQLVTETI
                     TTVLFIVSFSRLPNVPRGQFNFKKEAVKIAISLMTAITVVGLVFMIQQASALETISVF
                     YHDAYEKSGGKNIVNAILGDFRALDTLAEGLVLIIAGLGIYTLLNFKDRRGQDERE"
     gene            5500..5925
                     /locus_tag="PTC28_000447"
     CDS             5500..5925
                     /locus_tag="PTC28_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000661906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation/H+ antiporter subunit B"
                     /protein_id="HDK5715766.1"
                     /translation="MKENDLVLKTVTRIVIFIILTFGFYLFLAGHNNPGGGFIAGLIL
                     SSAFILMFLAFDVAQVLDALPIDFRKLMIIGALVSLTTAIVPVFFGKNILYQADWYVK
                     FPYFGEVHLSTIMFFEAGITLSVVGVVVTTILSLSGGKS"
     gene            5922..6266
                     /gene="mnhC2"
                     /locus_tag="PTC28_000448"
     CDS             5922..6266
                     /gene="mnhC2"
                     /locus_tag="PTC28_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh2 subunit C"
                     /protein_id="HDK5715767.1"
                     /translation="MNIILLIVIGFLVFIGTYMVLSKNLIRIVIGIAIFTHAGNLIIM
                     SMGEYTPQKTEPLIVGNNQNFVDPLLQAIVLTAIVIGFAITAFLLVLVYRTFKVTKED
                     EIDVLTGGEEDE"
     gene            6259..7758
                     /locus_tag="PTC28_000449"
     CDS             6259..7758
                     /locus_tag="PTC28_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit D"
                     /protein_id="HDK5715768.1"
                     /translation="MNDNLLAVPILVPLICALFLVILHRQVRLSRRIALGALLISFIA
                     SLIMLIEVMKNGPMTLDFGDWPAPFGIQYVGDPLSLILVTTTFLVVFMIVAFGFGRGE
                     KRASRYYLLSFILFLTTGVVGSFLTADLFNLYVMFEIMLLASFVLVTLGQSVEQLRAS
                     IIYVVLNVIGSWFFLVGIGLLYRQIGTLNFTHIAIRIQELHDPTAIHLVAMSFIVAFG
                     SKAALVLFMWLPKAYAVLNTELAALFASLMTKVGAYALIRFFTLIFNQSGDIVEPLLI
                     VMSCLTMLIGAIGTVAYKDIKKIAAYQVVLSIGFVIFGLGTHTFYGVNGAIFYLVNDM
                     IVKALLFFIIGIIVYTTGYRQYRHLKGLAKKEPWLGVALIIVTLAIGGVPPLSGFPGK
                     LLIFMGAIQHQHYIGLTLMILTSLIGMFSLFRVFFYMYAGNDVKGAEMDYKPIRVNRK
                     TIVMFMTGVTLAMGLFAPIIYKVTEQATNLSMDPHQYEKMVNPELRGGS"
     gene            7759..8241
                     /locus_tag="PTC28_000450"
     CDS             7759..8241
                     /locus_tag="PTC28_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001071973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit E"
                     /protein_id="HDK5715769.1"
                     /translation="MRQIGLNVMIAFLWVLFQDEDAFRLTTFVTGYIIGIVVIYIVHK
                     FFDQEFYPKKVWVSIKFLAVYLYQLLTATISITNYVLFKTNQMDPGLVTYETQLDKDW
                     EITFLTILIIITPGSTVIRVNREPSIFLIHAIDTTEKEKKSLLKSIKQYEELIVEVTK
                     "
     gene            8238..8531
                     /locus_tag="PTC28_000451"
     CDS             8238..8531
                     /locus_tag="PTC28_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000616642.1"
                     /note="subunit F of antiporter complex involved in
                     resistance to high concentrations of Na+, K+, Li+ and/or
                     alkali; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDK5715770.1"
                     /translation="MIEALTQFLLSSALVIFAISLVVVLFRLVKGPTTADRVVAFDAM
                     SAILMSTVGVLSLLFETFSFLDSVLLIAIISFLSSVTISRFIEGGNVFHGDDK"
     gene            8515..8961
                     /locus_tag="PTC28_000452"
     CDS             8515..8961
                     /locus_tag="PTC28_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit G"
                     /protein_id="HDK5715771.1"
                     /translation="MAMTNDIIELLAAFLVFAGSLIALVSAVGLVRFRDVFLRIHAAT
                     KASTASVLLTLVGVFIYFIFAQGYYSVRTLLALVFINITAPVGGHLISRAAYRTGAYM
                     YQKNASQENTDLNKEHLDEEAKRQIRIEKRAKRRKRIYSRLDKDDT"
     gene            complement(9598..10515)
                     /locus_tag="PTC28_000453"
     CDS             complement(9598..10515)
                     /locus_tag="PTC28_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002501435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HDK5715772.1"
                     /translation="MKRIFAIAILFVLLAACGINKGDESEHKLKIVTTNSILYDMTKN
                     ITGDKAEIHSIVPVGQDPHEYEIKPKDVQALTDADVIIYNGFNLESGNGWFEKALKQA
                     NKSIKDDSVIQASKNVKPIYLKQGEKSEHNIDPHAWLSLGNGIEYVKTIKSALENADK
                     THAKDYDKQGSEYLSKLEKLNKESKDKFNDIPKEKRVMITSEGAFKYFAQQFDVKPGY
                     IWEINTENQGTPEQMKQAVDFVKENHIKNLLLETSVSDKSMKSLGEETGAKIYGTVYT
                     DSIGKKGSDGDSYYKMMESNIKTIHESMQ"
     gene            complement(10515..11354)
                     /locus_tag="PTC28_000454"
     CDS             complement(10515..11354)
                     /locus_tag="PTC28_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDK5715773.1"
                     /translation="MSFVQHLFEYQFLSRAMLTAILVGVVCGVVGCLIILRGLSLMGD
                     AMSHAVLPGVALSFLMNIPMFIGAMVTGMLSSIMIGYISEASKTKKDAAIGITFTTFL
                     ALGIVLISVIHSATDLYHILFGNILAITQSAFHTTLAVSIVVLALILILYRPLKMSTF
                     DPIFSRMSGLNTTMIHYFVMLLLALVIVASVQTVGVILVVALLITPASTAFLFTKKLS
                     TMMIVSSIFSVISSTLGIYMSFKLNLPSGAVIVLISAVLYGLTFGIIKLINLLQKGAF
                     QTS"
     gene            complement(11329..12105)
                     /locus_tag="PTC28_000455"
     CDS             complement(11329..12105)
                     /locus_tag="PTC28_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HDK5715774.1"
                     /translation="MLSIENLNLHLGQKHVLKNISLDLPFNGEMIGIMGPNGSGKSSL
                     IKSIIGELPAKGKVTLNQQPAQQQLTNITYIPQKSVLDLDFPINVQDLVLTGCYQEIG
                     WFRRVPKAIREKRDTLLKELELYELRKRQLHALSGGQLQRVFIARALMSDSLVYLLDE
                     PFVGIDFKSERIIFEKLQYLKQQGKLILIVHHDLSTAGQYFDRILLLNQSIAFLGDSA
                     EALQPKNIESVFLSRYHQAKKDTPLHRKESAQHVVRSTPL"
     gene            12227..12874
                     /locus_tag="PTC28_000456"
     CDS             12227..12874
                     /locus_tag="PTC28_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HDK5715775.1"
                     /translation="MLTEEKEDYLKAILSHDGIDTYVSNKTLSRFLNIKPPSVSEMVG
                     RLEKEGYVMTKPYKGVKLSELGLSYTLDVIKRHRLIELFLIEVLNYTWEEVHVEAEVL
                     EHRVSKLFVERLDELLKYPKTCPHGGVIPRDNHFEEIYKIPLLSFEEGDVVTIRRVRD
                     RSELLVFLSSKALSIGDTVKVIAKDDINRLMELENKGEKIVLSYQNAEVIFGEKA"
     gene            complement(13272..14270)
                     /locus_tag="PTC28_000457"
     CDS             complement(13272..14270)
                     /locus_tag="PTC28_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDK5715776.1"
                     /translation="MKNERYSKDNIYLCIGLISLVIVGLLSMMVGSDVIRFSDVIAYF
                     INPSASAYQFTLEVLRLPRITLAILAGTALGLSGLLLQNVLKNPIASPDIIGVTGGAS
                     LSAVLFITWFSHLSIHLLPLFAITGGTVAMFILMSFQMNYQIRPSTLIIIGIALQTVL
                     MGITQGLLLTTKQLSASKAYTWLVGSLYGASFQDSLILCGALLLMTPLLWVIIPRMKI
                     AALNESVATGLGLRIQQTRLLQIIVATLLVSIAISFVGNIGFIGLIAPHIAKTLIRTS
                     TIKQFIMTACIGAISLMVADLISRTLFLPKEVPAGVFIAAFGAPFFIYLLLTVKKL"
     gene            complement(14267..15262)
                     /locus_tag="PTC28_000458"
     CDS             complement(14267..15262)
                     /locus_tag="PTC28_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000925002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDK5715777.1"
                     /translation="MSLKPIHHLFIASACLVIVSFLSLMIGNTLVSLPQLIQALFHFD
                     GQNDVHTLVTGSRASRTIIALLTGAALAVAGLFMQVLTRNAVASPGLFGVNAGAVFFI
                     VTGVTLIRVHSFEALVVMAFVGAILVTILVVGLGMFKQARFTPQRVILAGASISMLFT
                     AFTQGILIMNETNLQGLLFWLSGSVSLRNIWDIPWMIVIILLFLIAGFFMAPHLNILM
                     TSDEIATGLGQNVKRIKWVIVLMISVLAGSSVALAGSIIFVGLIIPNIAKLILPPRYQ
                     LLIPYTALLGSCLMISADIVARVIIRPLELPVGIITGILGALVLIYLMKKGIYRV"
     gene            complement(15279..16262)
                     /locus_tag="PTC28_000459"
     CDS             complement(15279..16262)
                     /locus_tag="PTC28_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-siderophore ABC transporter
                     substrate-binding protein"
                     /protein_id="HDK5715778.1"
                     /translation="MNKLLQLLVLPLVLLLVLSACGNSSHKEASDKKADTTTIKHAMG
                     TTEIKGEPKRVVTLYQGATDVAVSLGVKPVGAVESWTQAPQFEYLRDDLKDTKNVGQE
                     PAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTITTDTVYKFKDTTEMMGKALGK
                     EKEAQSLLQKYDDKVKAFQKDAKAKYGDAWPISASVVNFRADQTRIYAGGYAGDILQD
                     LGFKRPEGQQKEVDKGKDIIQLTSKESIPLMDADQIFIFKSDPKAADADLVQKTEQEW
                     TSSTEWKNLDAVKKGHVVDGVDEITWNLAGGYQSSLKLIDDLYEKLDIKKQ"
     gene            16499..17476
                     /gene="sbnA"
                     /locus_tag="PTC28_000460"
     CDS             16499..17476
                     /gene="sbnA"
                     /locus_tag="PTC28_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diaminopropionate biosynthesis protein SbnA"
                     /protein_id="HDK5715779.1"
                     /translation="MIKNEATYDSLLSCIGQTPIVQLQRLFPEHRVLAKLEYMNPGGS
                     MKDRPAKFIIERGLATGEINASTHLIESTSGNLGIALAMIAKIKGLKLTCVVDPKISP
                     TNLKMIESYGANIEMVEEPDEHGGYLMTRIHRVKTLLAETENAYWINQYANDLNWQAH
                     YHGAGTEIVEAVEEPIDYFVAPVSTTGSIMGMSRKIKEHHPNAQIVAVDAKGSIIFGD
                     TPCNRELPGIGASRVPEILNAAEIDDVIHIDDYRSALGCHQLVDQEGIFAGGSTGAII
                     SAIQQLTQKVEPGATIVTILPDRGDRYLDLVYSEKWFEQLKNKQESETY"
     gene            17478..18488
                     /gene="sbnB"
                     /locus_tag="PTC28_000461"
     CDS             17478..18488
                     /gene="sbnB"
                     /locus_tag="PTC28_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diaminopropionate biosynthesis protein SbnB"
                     /protein_id="HDK5715780.1"
                     /translation="MKHPLLYLNRTDIEQAGGAQSQIYVDALTEALTAHANQDFVQPL
                     KPYLRQDAENGHIADRIIAMPSHIGGDHSVSGIKWIGSKHDNPSKRQIERASAVIILN
                     DPETNYPIAVMEASLISSMRTAAVSAIAARHLARPGFENLTIIGCGLIGDKQLQTMLE
                     QFDHIQKVYLYDQFEAASQKMIEKWSAQRPDMTWVQAQSAREAVENGDVVIPCTVTDQ
                     PYIEYDWLRQGAFVSNISIMDVHKEVFIKADKVVVDDWSQSNREKKTIHQLVQDGLFS
                     REQLHAELGQLVTGEKVGREHDDEIILLNPMGMAIEDIASAYFIYQRAQAENIGTTLS
                     LY"
     gene            18500..20275
                     /gene="sbnC"
                     /locus_tag="PTC28_000462"
     CDS             18500..20275
                     /gene="sbnC"
                     /locus_tag="PTC28_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B biosynthesis protein SbnC"
                     /protein_id="HDK5715781.1"
                     /translation="MVSEHEHNVTRAQQYILKDLVDALLFEDLGGIASTSERLTIQQQ
                     TYLRYEKKGIVLLIPVYYSGLNVYRSNGEAVFHIESKTCMPLTVHELWELFVTMNADL
                     AAEWAHARFAEGLEAAVTELTAQYDGFKASEHPFILSEQFASLKDRPFHPVAKEKRGL
                     TAEDYAVYQAEYHQPLAVQTVAIRKSHVIQGKGATDEQYAQFWGDTLLRCQQALIEKG
                     YDTEDYVIFPVHPWQYEHVLPVQFSAEIKQGIVVLLDVTMGQYLSSSSMRTLIPLAAP
                     FTHLKVPFSMQSLGALRLTPTRYMKNGEAGETLLRDIIAQDTSLNGRVKLCDETVWWS
                     YMNEAQDIFQDQSGHLTMQLRHYPESIKDAQMVTSMAALAAHESTLYERILETDHPTT
                     EQINALFEQVSDAFLKMTLALMKYGVLPELHGQNVLVVFREGHVAEFVLRDHDTVRIF
                     PEWLTAQGFKLPNYAVRKDTPNTLLNEDIETFFAYFQTLAVSVNLYAIVDALVDVFKV
                     SEMELMTQLRQTMQHHIDTIDWLPGTSEEVERIIFTQETWPFKRILLPLLHQRGDGGG
                     SMPSSIGRVPNPMKRTDNHRTNVAT"
     gene            20247..21509
                     /locus_tag="PTC28_000463"
     CDS             20247..21509
                     /locus_tag="PTC28_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5715782.1"
                     /translation="MIIEQTWRRNFRTLWLGQFMAIAGLTVLVPLLPIYIASLKQLNI
                     FEIQLWSGIAIAAPAITTMLASPLWGKLGDRLSRKWMVLRALFGLGLCLLLMAFCTTP
                     FQFVLVRLLQGLFGGVVEASSAFASGEAPESERGAVLGKLQSAVSAGSLVGPLIGGVL
                     ATVLGFQALLFLIGLITLLMSILGVFFLIETTHTHANTEQPQVKKSVRQSMKCLLCTQ
                     LTCRFIIVGVLANFAMYGMMTALAPLVSSVNHVHIDDRAAVGILQSAFWTASMMSAPF
                     WGYFNDKAYVKNVYIIASILCGISVLWQGVATDLWMLGIARVLQGLTYSALIQSVMFV
                     VVNASHHQLKGTFVGSTNSFLVVGQIVGSLSGAIVTSYTAPATTFILMGVIFALSSTL
                     LWTSHIKNQKINPILTGFWEVKEQRAKL"
     gene            21496..23214
                     /locus_tag="PTC28_000464"
     CDS             21496..23214
                     /locus_tag="PTC28_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore biosynthesis protein SbnE"
                     /protein_id="HDK5715783.1"
                     /translation="MQNFKMNKRAEHAALERLLNIYFREKGCSPKKEGTSQWHITLKD
                     DLTLRGKLRYVSSMGHHMYDSAVYLESIGHVSQLTPLEAIRYILEAIAYDETSQTETT
                     IVEAVYQDICNSISRTTRYLDQARRHAPPHQNHYIASEQSLYLGHPFHPTPKSATGFT
                     DEDIEQYAPECHVAFQLHYLAVDPALLVERYVPNYEARVDETVRQLAQIEEDEYTVTY
                     RLLPVHPYQIEVLKQQPTIQQHLANGTIQDLGQRGHVVYPTSSVRTVFVKALNIYLKL
                     PIQVKITNFVRTNDFEQIERTLDAAEIIAAIKPEYETATFKLMFEQGYRALQPDNDAV
                     IDILANSAMIVREGIEQYDSLEEIHVLASLFETMPDEPTSKLGQAWLRSGLSREDWLT
                     LYLNQVIWPMLELFAHTGISLEAHVQNTLVALEEGRPTVCYVRDLEGICVSERIATAQ
                     GMIPHQISADSPVVYTHHEAWHRFKYYVIVNHLGHLVSTLGKATGDEEMLWQTVNRTL
                     ETWQERAEGHDVLMQCLEDLRYNPTFAAKANLMSKLQERGEDPIYIKIPNPISQEEDS
                     IYETTD"
     gene            23198..24952
                     /gene="sbnF"
                     /locus_tag="PTC28_000465"
     CDS             23198..24952
                     /gene="sbnF"
                     /locus_tag="PTC28_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphyloferrin B biosynthesis protein SbnF"
                     /protein_id="HDK5715784.1"
                     /translation="MKQLIEQVRQRIMQQLVTSLIYEDVVHYEQLPSEDDECDTYTIE
                     GEAVTYRVQLQQSDSFERLRISPPVWRIADGEEAVTLDYAQLLREVRFTFDKDEQKLE
                     DFIIELLQTELKDTQAQRYRAQQSQMSLTAFDDYESYAMEGHMYHPSYKSRLGFTLDD
                     NVRYGPDFRPSFQLQWIAIAPDHVETTVSASVDTVALLQRQLGTETLATFEETLQQHG
                     HTLETMVLIPVHPWQFEHVIQVEFAEAWMHGEMLWLGTSDEMYVPQQSIRTLTPTDRN
                     KYYLKTPISITNTSTKRVLAPHTIENAAQITDWLKHIQSKDTYLQQHLQTVFLGEVLG
                     HAYHNPTLSEVKQQRIYGALGVIWRENIHHYLALHESAIPFNALYSVDADNRPLIDAW
                     MSKYGVEQWMAQFFSVAVTPLIHMLYHHGIAFESHAQNMMLIHENGWPTRIALKDFHD
                     GVRFKPSLLSEVAQNPRLRDTPEAHRKVNRNSFIETEDVNLVRDFLHDAFFFINIAEI
                     IDFVARQYKLKASEQWTMVRTVIEQYQQQFPNLENYRHFDLFVPTIQVEKLTTRRLRE
                     DVALRLHEVRNPLRRSEV"
     gene            24949..25743
                     /locus_tag="PTC28_000466"
     CDS             24949..25743
                     /locus_tag="PTC28_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HpcH/HpaI aldolase/citrate lyase family protein"
                     /protein_id="HDK5715785.1"
                     /translation="MKSLSLKRNLAEGKVQYGLMNSIPDPLVIEIIAASGYDFVVIDT
                     EHVAINDETLAHMIRAAETANIIPIVRVTAAIERDIIKVLDMGAKGIVVPHVNDRETA
                     ERIVKLSRYYPEGMRSLNGGRVARFGEIPLKEAMAEANASICVIAMIENMQGVRAIDE
                     IVQVEGLDMVIEGAADLSQSLGIPWETSHDQLQRAIQHVYTTTTTAGKQFCALPRDDQ
                     QVQRWQQQGVQCFLMGDDRGKLYRHLKHNLAQVKEVTAHDGDSYIS"
     gene            25718..26920
                     /locus_tag="PTC28_000467"
     CDS             25718..26920
                     /locus_tag="PTC28_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III PLP-dependent enzyme"
                     /protein_id="HDK5715786.1"
                     /translation="MTAIHTLVKQLKQQGPLCHFIYDMDGLRQHLETVTSQLPDNCEM
                     YYAMKANSESEILAAIQPHVAGFEVASEGEIAKALVHTTAEHVIFGGPGKTDESLRYA
                     IQQGIRRIHVESLYELERLNALLKQENATMSILLRVNLAGPFPAATLHMAGQPTQFGI
                     DETEVDTVIATAQNMPRIQLEGFHFHSISNNLDAALHLQVMTLYFQKAKAWAAQHDFT
                     LQHLNVGGGIGVNYADLNEQFDWTYFTTELSALIEEEGLQNITINFECGRYMVAHIGY
                     YVTEVLDIKRVHGAWFAILKGGTQHFRLPVSWQHNHPFEILPLGEQVNQIAPRTIEQQ
                     AVTFVGQLCTPKDVFAKAVEIPALSTGDAVIFIYAGAYGWSISHHDFLSHPHPQCIYW
                     SSEKEGES"
     gene            26917..27681
                     /gene="sbnI"
                     /locus_tag="PTC28_000468"
     CDS             26917..27681
                     /gene="sbnI"
                     /locus_tag="PTC28_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional transcriptional
                     regulator/O-phospho-L-serine synthase SbnI"
                     /protein_id="HDK5715787.1"
                     /translation="MKQIYDTLQLIPVDKIDLHEAFEPSRLEKTKESIAKEQHLRHPV
                     LVVKTLFGRYMVIDGVHRFMSLKALGCEVIPVQVIQRTQYSIGSWHHKIPNGAWCEGL
                     TDEELLPWTTEVRDETPFITMCDQQTEHYLYVADLTVDKLDIWKKVVNSYSASCNVER
                     VPHSACLCLDSNDILMKYQPLQIGEIEAVVQRGQTVPAGVTRFNIAGRCLNLQVPLHL
                     LKNSNLGNQEQWHTFLQKKIESMRCYTEKIYLIEAE"
     gene            complement(27963..28706)
                     /locus_tag="PTC28_000469"
     CDS             complement(27963..28706)
                     /locus_tag="PTC28_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M50 family metallopeptidase"
                     /protein_id="HDK5715788.1"
                     /translation="MHGYSWITSPIPISFILLLCIAGLYLVSRHYAYRPIFSLLDIAL
                     NYIPVLTHEFGHVLFNRLSGGRVRDFVVVTTRRERNATGQQGYAVTASRSRSGHIITT
                     LGGYLMSPIMLILGLYIQSKGQGALFIMLYILVFIYFTWKTSRKAVPLLIIAFLILIG
                     YLGIQSENLTNYSFIYMLVYHFILGTLLGEIIQSTITIIQLTFARPQPEWDGTALKML
                     TKLPTVFFSSLWIVTNFLAIYYFIQYVLL"
     gene            complement(28780..29199)
                     /locus_tag="PTC28_000470"
     CDS             complement(28780..29199)
                     /locus_tag="PTC28_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nodulation protein L"
                     /protein_id="HDK5715789.1"
                     /translation="MTHMIGHVQNHCYIEPPFYFDYDYNIHLGDNVYVNKHNTWFDIG
                     LFLSTITSKIRPNVQLITVNHPLDPTKRRSGIEQGPKMTIEDDVWIDADVPALPGVTV
                     HQGATVAARRIVTRAVPASTDVADNPTKVIRQLNDTL"
     gene            29572..30393
                     /locus_tag="PTC28_000471"
     CDS             29572..30393
                     /locus_tag="PTC28_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WecB/TagA/CpsF family glycosyltransferase"
                     /protein_id="HDK5715790.1"
                     /translation="MAKALPTGHHEGTFPSRDTTVEGTYTFKEKKAQVQVMNVMFDNV
                     TLMDMHQNILKYMHTETKHNLFIVTANPEIVHYASENPLYAQMLKQADFIVPDGTGIV
                     KAAWILGQPLQERVPGIEVMETCLNIADLERKKVFLLGATSPVVEKAARRIQRQYPHI
                     DIQTHHGFIDITDQNVIEQVRDFNPDFIFVGMGYPKQEQWIQHNRHHFDHTLMMGVGG
                     SIDVYSGEVKRAPYVWRAMNLEWAYRALTDIKRIHRLKRIPKFVVGVYKQKYLGK"
     gene            complement(30607..31401)
                     /gene="tagH"
                     /locus_tag="PTC28_000472"
     CDS             complement(30607..31401)
                     /gene="tagH"
                     /locus_tag="PTC28_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acids export ABC transporter
                     ATP-binding subunit TagH"
                     /protein_id="HDK5715791.1"
                     /translation="MNPTVSINEVTKEYRIYRNNKERIKDAIWPKHKNKTFYALKDVT
                     FQAYAGDVIGLVGINGSGKSTLSNMIGGSLTPTHGHIDKTGDVSVIAINAGLNGNLTG
                     MENIEFKMLCMGFKKNEIKALTPEIVEFSELGEFIYQPVKKYSSGMRSKLGFSISATI
                     NPEILVIDEALSVGDQTFTQKSLKKIYEFKEDEKTIFFVSHNLRQVKEFCTKIAWIEA
                     GQLKDFGSVEDVLPKYEAFLKDFKKKSTAEQKAFRQALDENRFVIK"
     gene            31680..32483
                     /locus_tag="PTC28_000473"
     CDS             31680..32483
                     /locus_tag="PTC28_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001273058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5715792.1"
                     /translation="MNSVITVMKEHFKSFYLIQRLAQFQLKISNHNNYLGFAWEIINP
                     VIQIMVYWFVFGFGIRSNHPIDGVPFIYWLLVGISMWFFINQGILEGTKSITMKYGQV
                     AKMNFPLSIIPTYIVTSKLYGHIMLVVAIVILCTVSGMTPTIYILQLFIYIPFAFCLT
                     ASVTLLTSTLGVLVRDTQMAMQALLRVLFYASPILWTPPAGSLAEKILMFNPIYFVAE
                     SYRAAILFHEWYFITHWELALYNVCVTAMLFIIGSMLHMRYRDHFADFM"
     gene            32558..33649
                     /locus_tag="PTC28_000474"
     CDS             32558..33649
                     /locus_tag="PTC28_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HDK5715793.1"
                     /translation="MMRYYIKAFYICMVACLSRLYSALRIDRKHIVFLMTFKEDQLPI
                     IYQLSQRGFNITVFAKPKDFHYLENRKQITYYPLKQSSILKQLAALATAKVVFIDTYY
                     LIMAGWRKKEGQTVIQTWHAAGALKKFGLEDHSVDLTQKEHVDQYCAVYQATDKYLVG
                     GQQMADCFEKAFGARYEQLLSFGSPRLTTYRHIDRHAHQQKLKKQLGIQNKVAVYLPT
                     YREGGQTNRTIDKETFETAVPGYTLLSKYHPTVSAAAENIKMCTLDLIVLADLIITDY
                     SSLAIEASIVNTPTLFYVYDEADYEIVRGLNKYYYDIPQEYKAYDERTLYERINEGQL
                     QPLFQKWHQYNTSESLNQVVNYVEKLVRI"
     gene            33743..34141
                     /gene="tagD"
                     /locus_tag="PTC28_000475"
     CDS             33743..34141
                     /gene="tagD"
                     /locus_tag="PTC28_000475"
                     /EC_number="2.7.7.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate cytidylyltransferase"
                     /protein_id="HDK5715794.1"
                     /translation="MKRVITYGTYDLLHYGHIELLRRAREMGDYLVVALSSDEFNRIK
                     NKKSYYNFEQRKMMLESIRYVDLVIPENDWGQKETDVEKYEIDTFVMGHDWEGEFDFL
                     KDKCEVIYLKRTEGISTTQIKQELYGKDAK"
BASE COUNT        10463 a         6234 c         7368 g        10488 t
ORIGIN      
        1 aatttggcat atttaattaa aaatcacagc agtatatata tactttttgt atttatatac
       61 attttattgc ggtataaaat aattacgagc tacatttatt gcaatttgta gcatattaag
      121 atcataaaat gacatagagg tgtgaaaaaa taaaaagcgt cctcaaaaaa gtgcatgatt
      181 cacacacttt tgagaagaca atgaatcaaa tagcgtatgc ttagttgaac tgaatgataa
      241 taatcgcaat aataatgagc ataaaaccta ataagcgctg tttcgtaata tgacgatgtg
      301 gtacaccgaa tagtccgaaa tggtcgatga gtaagcccat aataatttgt ccgaccatca
      361 cagtaataag tgtgaaagtg accccaatca caggcgttaa aataatattc gttgtgacaa
      421 aaatgacacc taatgccccg ccaacaaagt gccaccattt caatggacca tgctgctcag
      481 aggttgcatg aattttaacg tgtctgtgta gcatcaacgt caaaataatg agtgctgatg
      541 cccctactgt aaatgaaact aatgacgcaa agaaggggga gtggagcgtt tggcctaaat
      601 gactattgat tgctgtttga atgggcggcg taaaaccaat gatcataccg ctaagcatcc
      661 atggcccatt atgactcgat tgtgccaatt gcttagcgtt cttttgcaga ttcatcaaaa
      721 taataccgat gagtaataac acaatcccaa gcactttcat cacatgtaac gcttgaacat
      781 ctacattgaa ccaaccgaac gtatcgatca acatactcat caaaatttgt ccggtaatcg
      841 ttgtcacaac ggttaacgat gcgccaatac gtggtaacaa aatcatatta ccggttaaat
      901 aaatcacgcc catcaatcca ccaacatacc agtaataatc aaaatggtaa tgtccgaaag
      961 cttctgcagt cagtaagtgt ggattgagta taaagttgag tatcacgagc aataatgttc
     1021 cgaccgtaaa tgaaatggca gaagcatata aagaagattg cgtgaaccgg cttaacctag
     1081 aattaataga ggtctgtaca ggaatgacag caccagctac taaccctaaa atcagtaaga
     1141 gtgaaagcat aatcaaccat ccttttgttt aactgtgtta tcattatagc aaaatgtcta
     1201 tgtgatagtg ctatatttgt ttgcgaacaa tttcaatagg gagacataca gggtaaaaga
     1261 tgtggtttga aacctattgg ttattataaa acggtaatag attatagtaa attttgctgt
     1321 gaacatgtat gatcatcatt ggtaaccgca ccatgactaa gaatgaagtt aaaggaaagt
     1381 tgtgatattt tgaaggaaca tgaaatcgta cgtgtgattg atgaccatct cttttttatt
     1441 aatgttaatg cgtcgtcaaa gcttgaagag gggcagtatg ttgaagtgct taatcctttt
     1501 aaatcttata aaacgttagc acgtattgat gaagtatacg aaaaatatgc gatttgtcaa
     1561 aagcttggga agtttaagat tttttatggt gatgaagtga gaattcgtcc gaactatcaa
     1621 tctaatgtgt aaatatagaa gttacgaaag tggcgagaca tcaaattttt gctagcccga
     1681 gatgatacac atcttaaatt attgtgtcta ttcatccgga gttattatga atttgagtgt
     1741 gcaaagactg gggaatctct ctcggtcttt tttatttgtt ttgaatatgt tcggttttga
     1801 gattaaggag ataccgatag attgatataa acgcaaaaaa ggccaggata tttaatattc
     1861 ctagcctcta tctacttatg gatttgtaat tcattaattc gaaatcgaga gtgaattgga
     1921 tacaaaaatg gatgctattg atttttgatt ttcacttctc taacgcgaca tattaaaaca
     1981 acacaatgag agatttatca atgacttgag cgcctgccac tttgacgaca ggaccatgca
     2041 tcgtcttcaa tacatttaat gccactaact tttccgcttc ttcttgaact acttcttttg
     2101 tgattgtccc tttaatgtta ggtaaactta atttgaaagt tttttgtaat gcgtctaaaa
     2161 aagtgatttc taaagtttta acgttcatcg taattgctcc tttttattga atattttctg
     2221 atgtcattaa ttcaatagcg tcatactgct cgccagtcaa cttctcaatc atttgactga
     2281 aagcttttaa gtcctcgtgt gaagcgtctg tttttaactg tgtaaagcga cgtgatgctt
     2341 tcttaggttt tccctctgct gaagttgttg tttgcgtcag aataagtgtt aagtgattga
     2401 tgttcatgtt tctgacctcc tttcactata tatatcgaaa tccaacgcaa aaaatcacac
     2461 ccctcatgag aaaaagtttt gtgaaagttg tttaatgtta ctcaaatata gtttataatt
     2521 aaataagaaa cataaaggag ggggaacgag tgaattgcgt ggatccaatt cgtgaaatga
     2581 gagatattca taggatgtat gattttttac aatcccattc gatacgtgat tatttgtttt
     2641 ttaagtttgc gattcatacg ggtgttaagt tagtcgaatt attaaattta aaggtcagtc
     2701 aagtgatgca tgatgatggc actatcattg agaaatggga tgtgtctcaa agtcaggaag
     2761 ttagtgtgcg tatcccgaac agtttaaggg aagagttaaa ggcgtatatc gatgctgagg
     2821 cgttaattaa gacggactta ttatttcgct ctaaacggac gcaaaaagga ctgagtcgac
     2881 aacaagccta tcgcattatt aatacagcgg cacagcaatt aggcctcgaa catatcggct
     2941 tgaccacttt gagaaaaact tttgcctatc acgcgtatga atcgggcatt tctatttcaa
     3001 tgattcaaaa gtatctcggg caccaaacat cacatgaaac gatgaaattt atcggtgtgc
     3061 ctaaaaaaga aatggatacg acaattgctt taaacctata aaaatagaga aaaggaggcg
     3121 tgatgatgct tagtggtttg ttacttattt tgattgttgt gatgggtgca cttgtcatct
     3181 caatgcaatg gcagacaaca cgtttaccgc attggattgc aatgcttgca cctatcattt
     3241 catcaattgt gtttattttt tatgctcctc aagttttaaa tcatcagcaa atcgttgaaa
     3301 caattcaatg gttccctgca ctagatatta acctcatctt gcgcttagac ggactcggtc
     3361 tattttttgc gctactgatt tcacttatgg gtgtggcagt atttttctat gcgacacgct
     3421 atttatctca ccaacatgat gatttgcctc gtttttactt gtatcttgtc ttatttatgt
     3481 tcagtatgtt gggcattgtc ctctccgata ataccatcat tctttatatg ttttgggaat
     3541 tgacgagtgt gtcatcattt ttattaatta gttattggta tgattcttca gaaagtcaaa
     3601 aaggggcagt gacgtccttt atggtgacgg tctttggcgg tttggccatg ctcgtcggat
     3661 tgatcatgtt gtatttcgtg acgggaacga atgtgatcag tgaacagctg aatcaacgtc
     3721 atgacattgt agggcatcca ttatttatcc ctatcatgtt gatgttgttg ctaggcgcgt
     3781 ttacgaaatc tgcacagtgg ccgtttcatt tttggttacc gaaagcgatg gcagctccaa
     3841 cgccagtgag tgcttatttg cattcggcga cgatggtcaa agcaggtatc tacttgttac
     3901 ttcgctatac gatgttgctc ggattgagtg atgcgtacat ttatttggtg acaggcgtgg
     3961 gcttgctgac gatgatattc ggttctatga cagcacttaa acaatatgat ttgaaaggga
     4021 ttctcgctta ttccactatc agtcagcttg ggatgattat gtcgatggtc ggtctcggcg
     4081 gtggtattgc acaagcgaca gacacgcaca tgattaaaat atatgcgtat gtgctgtttg
     4141 cggcgatttt ccatttgttc aatcatgcat tgtttaaagg gacattattc atgggtgtag
     4201 gcttaatcga ccatgaaacc ggtacacgtg atatacgaaa gctcggtggt ttgagacgcc
     4261 gcttacctgt gacgatggtc gttatgtttg cggcatcatt agcgatggca ggagtcccat
     4321 tgtttaacgg ctttatcagc aaagagatgt ttttcgaaag tttaatagaa gcacatcatt
     4381 taagtgcgtt taatgtgcca ctcatgattg tgattgcatt ggttggatgg ttggcaagta
     4441 tttttacatt catttacgcc ttatatttaa ttaaaacgac ctttttcgga gagctccgta
     4501 tagaacgtca tgtccatgaa ccgcgtctga tgattctacc tgcgacggtg ttggctctat
     4561 gtttaccgct catctttatc gtgccacaat ggatagggac acatgtgatt acaccagcat
     4621 ttagaggtgt cgtgcataca gaggccattg tccaaacggc accacacctt gcacaatggc
     4681 atggctttaa tttgccatta ttgatgagtg tgacagtgat tgtgctcggt attgtaggtg
     4741 tgttttctgt tgatcgttta cgcaagcgct ttttatctgc tcaagagaat gcattatcag
     4801 ttgaaaatat tttccatacg tcatacgagt cactggagcg tgtgtcaggt tatgggttac
     4861 gtcatttaat gaacaaccga ctcaattcct acattattgt aacgctactt atttatttca
     4921 ccattaatat atacggctta atacgtgcgg gtgtaccgga actttatgat atcaaagtga
     4981 cagattacca catttttcat attctgttac ttgtgaccat tatgttgatt ggttttgcgc
     5041 ttatatttat tcgccaacgt ttaaccatgg tcattttaac aggtggtatc ggttatattg
     5101 tgacattgtt ttttatttta atgcgcgcac cggatttagc attaacgcaa ttagtgactg
     5161 aaacgattac aacggtactg tttattgtga gtttttcaag attgccgaat gtcccacgtg
     5221 gccagtttaa ctttaaaaaa gaagcggtga aaatcgcaat ttcattgatg actgccatca
     5281 cggttgtcgg cttagttttt atgattcaac aagcgagtgc attagaaacg atttctgtgt
     5341 tttaccatga tgcgtatgaa aagtctggtg gtaaaaatat tgtaaatgcg attctaggag
     5401 actttagagc gctcgatacg ttggcagaag gtttagtact gattattgca ggcttaggta
     5461 tttatacatt actcaacttt aaagatagga gaggtcaaga tgaaagagaa tgatttagtc
     5521 cttaaaacag tcacacgtat tgtcatattc atcattttga cattcggttt ttacctcttc
     5581 ttggcaggtc ataacaatcc gggaggcggc tttattgcgg gattaatttt aagttctgca
     5641 tttatcttaa tgtttttagc ttttgatgtc gctcaagtgt tagacgcgct gcccatcgac
     5701 tttagaaagt taatgattat cggtgcttta gtatctttaa cgactgcgat tgttcccgtg
     5761 tttttcggta aaaatatttt gtatcaggcc gattggtacg tcaaattccc gtattttggt
     5821 gaagtgcatc tttctaccat tatgtttttt gaagcgggca tcacattaag tgttgttggc
     5881 gtcgttgtta caaccattct atcgttgagt ggagggaaat catgaatatt atattactca
     5941 tcgttatcgg atttttagtt tttatcggca catatatggt gttatcgaaa aacttgatac
     6001 gtatcgtgat tggtattgcg atttttacac atgcaggtaa tttaatcatt atgagtatgg
     6061 gtgagtatac acctcaaaaa accgaaccgt taattgtggg gaataaccaa aactttgtcg
     6121 acccattgtt acaagcgatt gtgttaactg cgatcgtcat tggttttgcg attacggcct
     6181 ttttactcgt attagtttat cgtacgttta aagtaacgaa agaagatgaa attgatgttc
     6241 taactggagg tgaagaagat gaatgataat ttactagccg ttccaattct tgtgcctctc
     6301 atctgtgctt tatttctagt gattttgcat cgacaagtac gtttgtctcg acgtatcgca
     6361 ttaggtgcgc ttttgatttc gtttatcgcc tctttaatca tgttaatcga agtcatgaaa
     6421 aacggcccga tgacattaga ctttggtgat tggccagccc cgtttggtat tcaatatgtg
     6481 ggagatccat taagcctcat attagtgacg acaacctttt tagtcgtttt catgattgtg
     6541 gcattcggct ttggacgtgg tgaaaaacgt gctagtcgct actatttact gtcctttatt
     6601 ttatttttaa caacaggggt cgtcggttcg tttttaacgg cagacttatt caatttatat
     6661 gtcatgtttg aaattatgtt attagcgtca tttgtactcg tcacactcgg tcaatctgta
     6721 gaacaacttc gtgcgagtat catttatgtc gttttgaatg tgatagggtc ttggtttttc
     6781 ctcgttggca ttggcttgtt gtatcgccaa atcgggacat tgaacttcac acatatagcg
     6841 attagaattc aagaattaca tgatccaacc gcaattcatt tagttgcgat gtcattcatt
     6901 gtcgcatttg gttcgaaagc tgcattagtg ctctttatgt ggttgcctaa agcgtatgcc
     6961 gtgttgaata cagaacttgc cgcattgttt gcttcattaa tgacaaaagt aggcgcctat
     7021 gcactcattc gattctttac ccttattttt aatcagagcg gtgacattgt cgaaccctta
     7081 ctcattgtca tgtcttgttt gacgatgctc attggggcaa ttgggacggt tgcgtataaa
     7141 gatattaaaa aaattgcagc gtatcaggtc gtcttgtcga ttggtttcgt catatttgga
     7201 cttggaacgc atacatttta tggcgtcaat ggtgcgatat tttatttagt gaatgacatg
     7261 attgttaaag cgttattgtt tttcattatt ggtatcatcg tttatacgac aggttatcgt
     7321 caatatcgtc atttaaaagg gctcgccaaa aaagaaccat ggctcggtgt ggcgttgatt
     7381 atagtgacac tagctattgg aggtgtgccg ccgttaagtg gttttcctgg gaaattattg
     7441 attttcatgg gtgcgattca acatcaacat tatatcggcc taacattgat gattttaacg
     7501 agtttaatcg ggatgtttag tttgttccgc gtcttctttt atatgtatgc gggcaatgac
     7561 gtgaaaggtg cagaaatgga ttataaacca attagagtga atcgtaagac cattgtcatg
     7621 tttatgacag gtgtcacttt agcaatgggt ctttttgcgc ccatcattta taaagtgact
     7681 gaacaagcga caaatttatc aatggatccg catcaatatg aaaaaatggt gaatccagaa
     7741 ctgcgaggtg gcagttagat gagacaaatt ggtttaaatg ttatgattgc atttttgtgg
     7801 gtacttttcc aagatgaaga tgcatttcga ctcacgacat ttgtgacagg ttacattatc
     7861 ggtattgtag tcatctatat cgtgcataaa tttttcgatc aagaatttta tccgaaaaaa
     7921 gtatgggtgt ctattaagtt tctggctgtt tatttatatc aattattgac ggcaacgatt
     7981 tcaattacga attatgttct tttcaaaacg aatcaaatgg atccaggatt ggtcacatat
     8041 gaaacacaat tagataaaga ttgggaaatt acgtttttaa cgattctcat cattattacg
     8101 ccgggatcaa cagtcattcg tgtgaatcgt gaaccgagca ttttcttaat tcatgcgatt
     8161 gatacgactg aaaaagagaa aaagagctta ctcaaaagta ttaaacaata tgaggagtta
     8221 atcgtggagg tgacgaaatg attgaggcat taacgcaatt ccttttgtca agcgcattag
     8281 ttatttttgc aatttcgtta gtcgtcgtat tatttcgtct tgtcaaaggt ccgactactg
     8341 cagatcgtgt ggtcgctttt gatgcgatga gtgcgatttt aatgtcgaca gtaggggtac
     8401 tcagtttatt atttgaaaca ttttcatttt tagattccgt attgctcata gcgattattt
     8461 catttttaag ctcggtcaca atttcccgtt ttatcgaagg aggcaatgtt tttcatggcg
     8521 atgacaaatg atatcattga gcttttagca gcctttcttg tattcgcggg aagccttatc
     8581 gcattagtca gtgctgttgg tttagtccga tttagagacg tgtttttacg aattcatgcc
     8641 gcgaccaaag cttcgacagc atcagtacta ttaacactcg ttggcgtatt catttacttt
     8701 atttttgcac aaggttatta cagtgtacgg acattgttag cattagtatt tatcaacatt
     8761 actgcaccag tgggtggtca cttgatctca agagccgctt atcgtacagg cgcttatatg
     8821 tatcaaaaaa atgcctctca agagaataca gatttaaaca aagaacactt ggacgaagaa
     8881 gccaaacgtc aaatccgtat cgaaaaacgt gccaaacgcc gtaaacgcat ctattcaagg
     8941 ttggataaag atgatactta gttaaaagat acaaaagtac tcctctctat gaatgagaag
     9001 cataaaactt caacatcata gagaggggat ttttatcatt ctattttgat tgtatgggta
     9061 atgcatttga aattgctaga atcagtcttt gtcgtcagta tagatgacaa atctagacga
     9121 acctccctag gcagagttaa caaaaaaaac acctcatcct caaaagagta atggagtgga
     9181 taaggataaa ttgttttcaa acaggagcta acctagttcg acaagtcaca ctttcaaaag
     9241 attgtagaac gattctcgct gatatgaatg tcttgacgca taagattgca gagcgaggcg
     9301 agactcctag catatttaga ataaaacgca aactccccct ctatagagaa gggggagttc
     9361 gcatgaaagt actgttagat ttctgccgtt ttcataagct attatatttt agaatgacta
     9421 tggttcaaat tgcaaaaacc gtgcaagact cccgagggat agagccgaag cggaaaatcc
     9481 accaacgcct cctctctgta actttcaatc aaagcgttgg ttagttgtag cgaggccctg
     9541 ggaaagcgca gcacggttca gcaatacggc taaagttaac tgtagaattc taaaatatta
     9601 ctgcatgctt tcatgaatcg tcttaatatt cgattccatc atcttataat acgaatcccc
     9661 atcgctacct ttcttaccga ttgaatctgt ataaactgta ccgtaaatct tagcacctgt
     9721 ttcttcacca agactcttca tactcttatc actcacactt gtttcaagca ataagttttt
     9781 aatatgattc tctttaacaa aatcaacagc ttgtttcatt tgttcaggtg taccttggtt
     9841 ttctgtatta atttcccaaa tgtatcctgg tttcacatca aattgttggg cgaaatattt
     9901 aaacgcacct tcacttgtaa tcatgacacg tttttctttc ggaatgtcat tgaacttatc
     9961 tttactttct ttattcaatt tttcaagttt tgataaatat tcactgcctt gtttgtcata
    10021 atcttttgcg tgtgttttat ctgcattttc aagtgctgat ttgatggttt taacatattc
    10081 aatgccatta cctaagctga gccaagcgtg tgggtcgata ttatgctctg atttttcacc
    10141 ttgttttaag taaatcggtt ttacattttt agaagcttga atgactgaat catctttaat
    10201 cgatttgttt gcttgtttca atgccttttc aaaccaaccg ttaccacttt caaggttgaa
    10261 accattgtaa ataatgacat cagcgtcagt taacgcttga acgtctttcg gtttaatttc
    10321 gtattcgtga ggatcttgac caacagggac gattgaatga atttcggcct tatcgcctgt
    10381 aatattttta gtcatatcgt aaagaataga gttcgtagtg acaattttta atttatgctc
    10441 ggattcgtct cctttattga taccacatgc agcgagtaac acaaagagaa tcgctatggc
    10501 gaaaattctt ttcatcatga tgtttgaaat gctccttttt gtaatagatt tatgagttta
    10561 atgatgccaa aagtaaggcc atataacacg gctgaaatga gtacgataac ggcaccactt
    10621 ggtaaattca atttaaaact catataaatg cctaacgttg aactgataac actaaatatg
    10681 ctagaaacaa tcatcatcgt agacaatttt ttagtaaata aaaacgctgt tgaagcgggt
    10741 gtgatgagta aagctaccac taaaatgaca ccgaccgttt gaacacttgc gacaataaca
    10801 agcgcaagta ataacatgac aaaataatga atcattgtcg tatttaagcc actcatacga
    10861 ctaaaaattg gatcaaatgt cgacatttta agtggtcggt atagtattaa aatcaatgcg
    10921 agaacgacta tgctgacggc taatgtagta tgaaacgcag attgagtaat cgcaaggatg
    10981 ttaccaaaaa gaatgtgata taaatcagtg gctgaatgaa tcacactaat gagtacaatc
    11041 cctagtgcta aaaaggtagt gaaagtaatc ccaatagcag catctttttt tgtttttgaa
    11101 gcttctgaaa tatagccaat cataatgctg cttaacatcc ccgtaaccat tgcgccaata
    11161 aacatcggaa tattcattaa aaacgagagt gccacacccg gtaagactgc gtgactcatc
    11221 gcatctccca tcagtgacaa acctcttaaa ataatgaggc aaccgacgac accacaaacg
    11281 acaccaacta agatggctgt taacatcgca cgtgataaaa actgatactc aaagaggtgt
    11341 tgaacgaacg acatgttgtg ccgactcctt tctgtgtaaa ggcgtatctt ttttggcttg
    11401 atggtaacga cttaaaaata cagattcgat gtttttaggt tgcaatgctt cagcgctgtc
    11461 tcccaaaaat gcgatagatt gattcaagag aagaatacga tcaaaatatt gtcctgctgt
    11521 tgaaaggtca tggtgtacaa ttaaaatcaa tttcccttgt tgctttaaat attgcaattt
    11581 ctcaaaaata atccgctcac ttttgaaatc gataccgaca aacggttcat ctagaaggta
    11641 gacgagacta tcagacatca gtgcgcgtgc aataaagaca cgttgtaatt gtccgccact
    11701 caatgcatga agttgtcgtt tccttaattc ataaagttcg agttctttta aaagtgtatc
    11761 tcttttttct cgaatggctt taggaacacg ccgaaaccag ccaatttctt gataacaacc
    11821 tgtcaaaact aaatcttgta cattaattgg aaagtccaaa tccagtacag atttttgtgg
    11881 aatatacgtt atatttgtca attgttgttg tgctggctgt tgattcagcg taacttttcc
    11941 ttttgcaggt aattctccaa taattgattt gatgagggat gattttccgc taccgtttgg
    12001 tcccataata cctatcattt caccattaaa aggtagatct aaagatatgt tttttaggac
    12061 gtgtttttgg ccaagatgca aatttaagtt ttctatagac agcataatta acaccacctt
    12121 cacttgaaat taggataccc taataaaatt atacgataaa ttgaaaattg tcaacatgaa
    12181 ttcgtttcgt ggtacaataa agtgaatatt tgagagaggt gaacatatgt taactgagga
    12241 aaaagaagac tatcttaaag cgattttgag tcatgatggt attgatacgt atgtttcgaa
    12301 caaaacattg tctcgctttt taaatatcaa gccaccgtct gtgagtgaaa tggtaggtcg
    12361 cttggaaaag gaaggctatg tgatgactaa gccgtataaa ggtgttaaat tgtccgagct
    12421 tggattgtca tatacgttag atgtgattaa acgccatcgc ctcattgaac tgtttctcat
    12481 tgaagtgttg aattatactt gggaagaagt acacgtagaa gcagaagtgt tagaacatcg
    12541 agtgtcgaaa ctctttgttg aacgattaga tgagcttcta aaatatccaa aaacgtgtcc
    12601 tcatggtggt gtgataccgc gtgataatca ttttgaagaa atatacaaaa taccgctcct
    12661 ctcttttgaa gaaggcgatg tcgtgacgat tcgtcgtgtg agagatcgtt cggaattgtt
    12721 agtgttctta tcgagtaagg cgctgtcgat tggtgatacg gtgaaagtga tagcgaaaga
    12781 cgatattaat cgtttgatgg agcttgagaa taagggcgag aagattgtgt tgagttatca
    12841 gaatgcggaa gtgatttttg gtgaaaaggc ttagttttat caatttttcg gttatatgat
    12901 ggagatagtg aatctttgta tattgctaaa ccaaccgacg cttttcctag ggctgatccc
    12961 tcaggagtcg cggttggttt ttgcaatctg aggtgtggtg aatctaatcg ttgaaaactt
    13021 gtaaagtaga aattactgta tttgtttgca ttttcaactc aatcacgctt cattttcttt
    13081 tgtggaagag tggaagttga gtgatattac gacaattaga attgtgccgt acattctagg
    13141 agtcttggct caactcagtt cggttgagtt aagcaatatc gaagtcaaaa aataataact
    13201 cacataaaaa aacggttgta ggagagaagg ggaatttctc atctgcaacc gtttttgtga
    13261 tatcgtgacg tctatagttt tttgacagtg agtaataaat agataaagaa tggcgcgcca
    13321 aatgctgcga tgaatacacc ggctgggact tctttcggta aaaagagtgt gcgactgatt
    13381 aagtcagcca ccataagcga aatggcaccg atacaagcgg tcatgatgaa ttgtttgatt
    13441 gtacttgttc gaatcagtgt tttagcgata tggggtgcaa tcaacccgat aaagccaatg
    13501 ttccctacaa aactaatagc gatggatacg agtagtgtcg cgacgataat ttgtaacagt
    13561 cgtgtttgtt gtatacgtag accgagtcct gttgcgacag attcatttaa agcagcaatt
    13621 ttcatgcgtg gtatgatgac ccataacaga ggtgtcatca agagcagtgc gccacataag
    13681 atgagactgt cttgaaaaga agcgccgtat aaactcccaa cgagccacgt ataagcttta
    13741 gaggccgaga gttgtttggt tgtgagtaat aggccttgtg tgatgcccat gagtactgtt
    13801 tgtaatgcga tgccaataat gataagtgtc gagggacgaa tttgatagtt catttgaaat
    13861 gacatcaaga tgaacatcgc gaccgttcct cccgtgatgg cgaaaagggg aagaaggtga
    13921 atgcttaagt ggctaaacca tgtgataaat agtacagcac ttaaactcgc cccccctgtg
    13981 accccaataa tatcagggga agcgatagga ttttttagga cattttgtaa taatagtcca
    14041 ctcagaccga gcgctgtccc tgcaagaatc gcaagtgtaa tgcggggaag gcgtaaaact
    14101 tctaacgtaa attgataagc actcgcgctt ggattgataa aatatgcgat gacatctgaa
    14161 aaacgaatga cgtctgatcc aaccatcatg cttaacaagc ctacgatgac aagactgatg
    14221 aggccgatgc atagatagat gttgtcttta ctatagcgct catttttcat acacggtaaa
    14281 tccccttctt cataagatat atcaatacta aagcgcccaa aatgcctgta ataatgccca
    14341 cgggtagctc tagcggtcga atgatgactc gcgcaacaat atctgcactg atcattaagc
    14401 aagacccgag taatgctgtg tatggaatca ataactgata gcgagggggc agtatgagtt
    14461 tggcaatatt tggaatgatg aggccgacaa atataatcga accggcaagt gcaacggaac
    14521 tccctgcaag cacactaatc atcaatacga tcacccattt gatgcgcttt acattttgac
    14581 ctaatcctgt cgcaatctca tcgcttgtca ttaaaatatt gagatgtggt gccatgaaaa
    14641 atccggcaat gagaaacaaa agtatgatca ctatcatcca cggtatatcc caaatatttc
    14701 gcaacgatac agaaccactc aaccaaaata ataagccttg gagattcgtt tcgttcataa
    14761 ttaaaatgcc ttgggtaaag gcagtgaaca gcattgaaat tgatgcgccg gcaaggatga
    14821 cgcgttgtgg tgtaaaacgc gcttgtttaa acatgcctaa tccgacgaca agtatcgtga
    14881 cgagaatagc gcctacaaaa gccatcacga cgagtgcttc aaatgagtga acacgaatca
    14941 atgtgacgcc cgtaacgata aaaaagacag cgcctgcatt gacaccgaac agtccaggtg
    15001 aagcgaccgc atttcgtgtg agcacttgca tgaatagacc tgcaactgca agggcagcac
    15061 ctgtaagtag ggcgatgatt gttcgagaag cacgtgaacc tgtcacaagg gtatggacat
    15121 cgttttggcc gtcaaagtgg aataacgcct gtatcaactg aggcagtgat acaagcgtgt
    15181 ttccaatcat taggcttaaa aacgatacaa tgacaagaca tgcacttgcg ataaataagt
    15241 gatgtatcgg tttaagcgac ataatgtaac tccttatgtt attgcttttt aatatcgagt
    15301 ttttcgtata aatcgtcaat caatttaagt gaagattggt aaccgcctgc taagttccaa
    15361 gtgatttcat ctacaccatc aacgacatgt ccttttttca cagcgtctaa gtttttccat
    15421 tctgtgcttg atgtccattc ttgttcagtt ttttgtacaa ggtcggcatc tgctgcttta
    15481 ggatctgatt tgaaaatgaa gatttggtca gcatccatca acggaatact ttcttttgaa
    15541 gttaattgaa taatgtcttt ccctttatcc acttcttttt gttgaccttc aggacgttta
    15601 aagcctaaat cttgtaaaat atctccagcg taaccaccag cataaatacg tgtttggtca
    15661 gcacggaagt ttacgacaga agctgaaata ggccatgcat caccatattt ggctttagca
    15721 tctttttgga atgctttcac tttatcatca tatttttgaa gtaatgattg tgcttctttt
    15781 tctttcccta aagctttccc catcatttca gttgtatctt taaatttata aactgtatct
    15841 gtcgtaatcg ttggggcgat ttttgacaat tgatcatata ctttttcgtt tctcacttta
    15901 gaagcaacaa tgagatcagg ttttaatttt gagatttctt ctaagtttgg cgcaggttct
    15961 tgaccgacat ttttcgtgtc tttcaaatca tctcttaggt attcaaattg gggtgcttgt
    16021 gtccaagatt ctactgcgcc cactggttta acacctaaag aaactgcgac atccgttgcg
    16081 ccttgatata aagtcacaac acgtttaggt tcgcctttaa tttcagtcgt tcccattgcg
    16141 tgtttaattg ttgttgtatc tgctttcttg tctgacgctt ctttgtgact tgaattgcca
    16201 cacgcagata agacgagtaa taagactaaa ggtaaaacga gtagctgtaa aagtttattc
    16261 atgagatgaa ctttcctcct atgtatcatc ggtattttca aaaataatga gaatcattat
    16321 caattaaagt atgtcgaatt tcaactcata agtcaataat aattttatct tttcaacaaa
    16381 aattataaat gtttgactta taaattgaat atcaatataa tgccaccata accgataatg
    16441 ataatcattc tcagttataa aagtttcatc tcaattcgat acaaggaggt cgtcgttttt
    16501 gattaaaaat gaagcaacat atgattcgtt attatcttgt attggccaga cgcctatcgt
    16561 acaactgcaa cgattatttc ctgaacatcg tgttttagcg aaattggaat atatgaaccc
    16621 gggtggcagt atgaaggatc gtccagccaa atttattata gagcgtgggt tagcaactgg
    16681 agaaattaac gcgtcgacgc atttaataga aagtacatca ggcaatctcg gcattgcatt
    16741 agcgatgatt gcaaagatta aaggattaaa gctaacatgt gtggtcgatc ctaaaatttc
    16801 accgacgaac ttgaaaatga ttgaaagtta cggtgccaat atcgaaatgg tggaagaacc
    16861 cgatgaacat ggtggctatt tgatgacacg tattcatcgc gtcaaaacat tgttagcgga
    16921 aacagaaaac gcgtattgga ttaatcaata tgcgaatgat ttaaattggc aagcgcatta
    16981 ccacggtgct ggtacggaaa ttgtcgaagc ggtggaagaa ccgattgact atttcgttgc
    17041 tcccgtgagt acgacaggta gcattatggg gatgagtcgc aaaattaaag agcatcatcc
    17101 gaatgcgcaa attgtagctg tggatgcgaa agggtcgatt atttttggtg atacgccatg
    17161 taatcgtgaa ctacctggga ttggtgccag tcgcgtgcca gagattttga atgcggctga
    17221 aattgatgac gtgatacata ttgacgatta tcgatctgca ttagggtgtc atcaattagt
    17281 ggatcaagaa ggcatttttg cagggggttc gactggtgcg attattagtg ccatccaaca
    17341 acttacgcaa aaggttgagc ctggcgctac cattgtgacg attttgccgg atagaggcga
    17401 tcgctattta gatttagtgt attcagaaaa gtggttcgaa caattaaaaa ataaacaaga
    17461 aagtgagact tattaatatg aaacatccat tattgtattt aaatcgtacg gacattgaac
    17521 aagcaggagg ggcacagtca caaatttacg tcgatgcatt aacagaagca ttaacggcac
    17581 atgcaaatca agattttgtc caaccgttga aaccttattt acgtcaagat gctgaaaatg
    17641 gtcatatcgc cgaccgtatt attgcgatgc caagtcatat cggtggtgat cattcagtat
    17701 ctggaatcaa atggattggg agtaaacacg acaacccctc aaagcgacaa atcgaacgtg
    17761 ctagtgcggt gattatttta aatgatccag aaacgaacta cccgattgcg gtcatggaag
    17821 caagcttaat cagtagtatg cgtacagcag ctgtttcagc gattgcggca cgtcacttag
    17881 cacggccagg ttttgaaaac ctaacgatta tcggttgcgg cttgattggt gacaaacagc
    17941 tccaaacaat gcttgaacag tttgatcata ttcaaaaggt gtatttatat gatcaatttg
    18001 aagcagcatc acaaaaaatg attgaaaaat ggtcagcgca acgaccagat atgacatggg
    18061 ttcaagcgca atctgcacgt gaagctgttg aaaatgggga tgttgtcatt ccgtgtacag
    18121 taacggatca accgtatatc gaatacgact ggttacgtca aggcgctttc gtcagcaaca
    18181 tttcgattat ggatgtgcat aaagaagtgt tcattaaagc agataaagtt gtcgtagatg
    18241 attggtcaca aagtaatcgc gaaaagaaaa cgatacatca actcgttcaa gacggtctat
    18301 tcagtcgaga acagttacac gctgaactcg gacaacttgt gacaggtgag aaagtcggac
    18361 gtgaacatga cgatgagatt attttattaa acccaatggg catggcgatt gaagacattg
    18421 cgagtgcgta cttcatttat caacgtgcgc aagctgaaaa tataggcaca acattaagtc
    18481 tttattagga gtggcatata tggtaagtga acacgaacac aatgtaacgc gtgcacaaca
    18541 atacatatta aaagaccttg tggatgcgtt attatttgaa gatttaggtg gcattgcatc
    18601 gacgagtgaa cgattaacga tacaacaaca gacgtattta cgttatgaga aaaaggggat
    18661 tgtgttgctc attccagttt attacagtgg actgaatgtg tatcgctcta atggagaggc
    18721 agtgttccat attgaaagta aaacatgtat gcctttgaca gtgcatgaat tgtgggaatt
    18781 atttgtcaca atgaatgcag atttagcggc tgagtgggca catgcgcgct ttgcagaggg
    18841 actggaggca gctgtgaccg agttaacggc acaatatgac ggatttaaag cgagtgaaca
    18901 tccattcatc ttgtcagaac agtttgccag tttgaaagac aggccttttc atccggtcgc
    18961 aaaagaaaaa agaggattga cagcagaaga ttatgctgtg tatcaagcgg aatatcatca
    19021 accattagcc gtacaaactg tggcaatccg aaagtcacat gtcatacaag gtaaaggtgc
    19081 gacagatgag cagtacgcac agttttgggg tgacacattg cttcggtgtc aacaagcact
    19141 cattgagaaa gggtatgaca ctgaggacta tgtcattttt ccggtacacc cttggcaata
    19201 cgaacatgtc ttgccggttc aatttagcgc agagatcaaa caaggtatcg tcgtcttgct
    19261 tgatgtgacg atgggacaat acctctcgtc ttcatctatg cgcacattga taccattagc
    19321 cgcgccgttc acgcatttaa aagtaccgtt ttcaatgcaa tcacttggtg cgttaagact
    19381 gacgccgaca cgttacatga aaaatggtga agcaggagaa acgttattgc gtgatattat
    19441 cgctcaagat acgtcattga acggtcgtgt gaagttgtgt gatgaaacgg tgtggtggtc
    19501 gtacatgaat gaagcacaag atatttttca agatcaatcg ggacacctca ctatgcagtt
    19561 acgtcactat cctgagtcaa taaaagatgc acagatggtc acttcgatgg cggcacttgc
    19621 tgcacatgag tcgacactct atgaacgcat tttagagacg gaccatccaa cgactgaaca
    19681 aatcaatgca ttgtttgaac aagtgagcga tgcattttta aagatgacac tcgcattgat
    19741 gaaatatggt gtgttgcctg aattgcacgg tcaaaatgtg ttagttgtct ttcgagaagg
    19801 gcatgtggcg gaatttgtat tgcgagatca tgatacggtc cgcattttcc cagagtggtt
    19861 aacagcacaa ggctttaaac tgccgaacta tgcggtgaga aaagatacac cgaacacact
    19921 attaaatgaa gatatcgaaa cattttttgc ttattttcaa acgttagcag tgagtgttaa
    19981 tttatatgcg attgtcgatg ctttagttga tgtgtttaaa gtatctgaaa tggaattgat
    20041 gacacagttg agacaaacga tgcaacatca catcgataca atagattggt tacctgggac
    20101 atctgaagaa gtggaacgca ttatctttac acaagaaaca tggccattca aacgcatttt
    20161 actgccattg ttgcatcaac gtggtgacgg tggtggaagt atgccatcga gtatcggtcg
    20221 tgtccccaat ccaatgaaaa ggacagataa tcatagaaca aacgtggcga cgtaatttca
    20281 gaacgctatg gctcggtcag tttatggcca tagcgggttt gaccgtgtta gttccattac
    20341 ttccaatcta tatagcgtcg ttgaaacagt taaacatttt tgaaattcag ttgtggagtg
    20401 ggattgctat tgcggcgcct gcaatcacaa cgatgttagc ttctccgtta tggggaaagc
    20461 tcggtgaccg actgagccga aaatggatgg tgttgcgtgc attgtttggc ttagggctat
    20521 gtctcttatt aatggctttt tgtacgacac cgtttcaatt tgtactcgta cgcttgttgc
    20581 aaggtttatt cggtggcgtg gtcgaagctt cgagtgcatt tgcgagtggt gaagccccgg
    20641 aatctgagcg tggcgcggta ctcggtaaat tacaaagtgc tgtgagtgcc ggctctctcg
    20701 taggtccact gattggcggc gtgctcgcga cagtgctcgg ttttcaagca ctcttattct
    20761 tgattggtct tatcactttg ttgatgagta ttctgggcgt ctttttctta attgaaacga
    20821 cacatacgca cgcgaataca gaacagccac aagtaaaaaa aagtgtacga caatcgatga
    20881 aatgtttgtt gtgtacgcaa ctgacttgtc gctttataat cgtcggggta ttagcgaact
    20941 ttgcgatgta tggcatgatg actgctttgg ccccattagt gagtagcgtc aaccatgttc
    21001 acattgatga tcgtgcggca gtcggaattt tacagtcagc gttttggaca gcttcgatga
    21061 tgagtgcccc tttttggggt tacttcaatg ataaagctta tgtcaaaaac gtatatatta
    21121 ttgcgagtat tttatgtggc atcagtgtgc tttggcaagg tgtggcgaca gacctgtgga
    21181 tgctaggtat cgcacgtgtg ttacaaggtt taacttatag tgcgctcatt caaagtgtca
    21241 tgtttgtcgt tgtaaatgcg agtcaccacc aactgaaagg gacgtttgta ggctcgacga
    21301 atagcttctt agtagttggt caaatcgtcg gtagcttgag tggcgcaata gtaacaagtt
    21361 ataccgcacc ggcgacgaca tttatcctga tgggcgttat tttcgcattg agtagcacac
    21421 tattatggac gtcacacatt aaaaatcaaa aaatcaaccc tatattgacg ggtttttggg
    21481 aggttaaaga gcaacgtgca aaactttaag atgaacaaac gcgcggaaca tgctgcgtta
    21541 gaacgactgc tcaatattta ttttagagaa aaaggttgta gccctaaaaa agaagggacg
    21601 tctcaatggc acatcacttt aaaagatgat ttgacgctac gtggaaagtt gcgctatgtc
    21661 tcatcaatgg ggcatcacat gtatgattca gccgtttact tagagagtat cggccatgtg
    21721 tcgcaactga caccacttga ggcaatcaga tatatacttg aagcgattgc gtacgatgaa
    21781 acttctcaga ctgagactac gatagtagaa gcggtttatc aagatatatg taacagtatt
    21841 tcacgaacaa cacgttatct tgatcaagcg agacggcatg caccacctca tcagaatcat
    21901 tatatcgcat cagaacaatc actttatctg ggccatcctt ttcacccgac gccgaaaagt
    21961 gctacaggct ttactgatga agatattgag caatatgcgc ctgaatgcca tgttgcgttc
    22021 caactgcact acttagcggt ggatccagct ctattagtcg aacgttatgt gccaaattat
    22081 gaagcgcgtg ttgatgaaac tgtgcgtcaa cttgcacaaa ttgaagaaga tgaatatacc
    22141 gtaacctatc gtttactgcc agtgcatcct tatcaaattg aagtgctcaa acaacaaccg
    22201 acgattcagc aacatctcgc aaatggtacg attcaagact taggacaacg tggccatgtc
    22261 gtttatccga cgtcatctgt gcgaacagta ttcgtaaaag cgttgaatat ttatttgaag
    22321 ttgccgattc aagttaaaat tacgaatttt gtgagaacaa atgacttcga acaaattgag
    22381 agaacattgg atgcggcaga aattatagca gcgattaaac cagaatatga aacggcgaca
    22441 tttaaattga tgtttgaaca aggctaccgc gcgctacaac cagataatga tgcggtgata
    22501 gatattttag ccaatagtgc aatgattgtg cgtgaaggca ttgaacagta cgactcatta
    22561 gaagaaattc acgtcttagc aagcttattt gaaacgatgc cagatgagcc gacgtcaaaa
    22621 ttaggccaag cttggttgcg cagtggatta tctcgtgaag attggctgac attgtattta
    22681 aatcaagtca tttggccaat gttggaatta tttgcacata cagggattag tctcgaagca
    22741 cacgtccaaa acacactcgt tgcgctagaa gaagggcgtc cgacagtttg ttatgtgcgc
    22801 gatttagaag ggatttgtgt ttctgaacgt atcgccacag cacaagggat gattccgcac
    22861 caaattagcg cagacagtcc ggtcgtgtat acgcatcatg aagcgtggca ccgttttaaa
    22921 tattatgtca ttgtgaatca tttgggccat ctcgtttcaa cgttgggtaa agcaacaggt
    22981 gatgaagaga tgttatggca aaccgtgaat cgcacattgg aaacgtggca agaacgtgca
    23041 gaaggtcatg atgtgttaat gcaatgtttg gaagatttac gttataatcc gacatttgct
    23101 gcgaaggcga atttgatgag taaattacaa gagcgcggtg aagacccgat ttatattaaa
    23161 attcctaacc cgattagtca ggaggaggac agtatttatg aaacaactga ttgaacaagt
    23221 gaggcaacgt atcatgcaac agttggtcac gtcacttata tatgaagacg tggtgcatta
    23281 tgaacagcta ccgagcgaag atgacgagtg tgatacgtac actattgagg gggaagccgt
    23341 gacgtatcgc gtgcaactgc aacagtccga tagttttgaa cgactcagga tcagccctcc
    23401 agtttggcgt attgcagatg gagaggaagc ggtcactctt gattatgcgc aactgctacg
    23461 agaggtgcgt tttacatttg ataaagatga acaaaaatta gaagacttta tcattgaatt
    23521 attacaaacc gaacttaaag acacgcaagc gcaacgttat cgtgcacagc aatcacagat
    23581 gtcattaacg gcatttgatg attatgaatc gtatgctatg gaaggccata tgtatcaccc
    23641 aagttataaa tcacggctcg gctttacact ggacgacaat gtacgctatg gtccggattt
    23701 ccgcccctca tttcaactgc agtggattgc gattgcaccg gatcatgtgg aaacgacggt
    23761 atccgcgagt gtcgatacag ttgcattgct tcaacgtcag ctcggtacag agacgttagc
    23821 aacgtttgaa gagaccctcc agcaacatgg gcataccctt gaaacgatgg tgctcatacc
    23881 ggtacacccg tggcagtttg aacatgtcat tcaagtcgaa tttgcggaag catggatgca
    23941 tggagagatg ctatggctcg ggacaagtga cgaaatgtat gtgccgcaac agtctattcg
    24001 aacactcaca ccgactgatc gtaacaaata ttatttgaaa acaccgatca gtataacgaa
    24061 tacatcaaca aaacgtgtgt tagccccaca cacgattgaa aatgcagcac aaattacgga
    24121 ttggttaaaa catattcagt caaaagatac ctatttacaa caacatttac agacggtatt
    24181 tctaggtgaa gtgttgggcc atgcatatca caatccgacc ttatccgagg tgaagcaaca
    24241 acgtatttac ggtgcactcg gtgtcatttg gcgtgaaaat attcatcatt atttagcatt
    24301 gcatgagtca gctattccat ttaatgcttt atattcagta gatgctgata accgcccact
    24361 cattgatgcg tggatgtcaa aatacggtgt agaacagtgg atggcacaat ttttcagtgt
    24421 cgcagtgacg ccattgattc atatgctgta tcatcacggc attgcgtttg agtcgcatgc
    24481 acaaaatatg atgttaattc atgaaaacgg ctggccaaca cgtatagcat tgaaagattt
    24541 ccatgacggg gttcgcttta agccgagttt gttaagtgag gttgcacaaa atccacgatt
    24601 acgtgacaca cctgaagcgc atcgcaaagt gaaccgaaac tcatttatcg aaacagaaga
    24661 tgtcaatctc gtccgtgatt ttttacatga cgcctttttc tttattaata ttgcagaaat
    24721 cattgacttt gttgcacgtc aatataagtt aaaagcgtca gaacagtgga caatggtacg
    24781 tacggtcatt gaacagtatc aacagcaatt cccaaacctt gaaaattatc gccacttcga
    24841 tttatttgta ccgaccattc aagtggaaaa actgacgaca cgccgtttac gcgaagatgt
    24901 agcattacgt cttcacgaag tacgcaatcc gttgaggagg tctgaagtat gaaatctttg
    24961 tcactgaaac gtaacttagc agaaggaaag gtacaatacg gattgatgaa ttcgattccg
    25021 gatccactcg tcatcgaaat cattgctgca agtggttatg attttgtcgt tattgatacg
    25081 gaacatgtcg caattaacga tgaaacatta gcgcatatga ttcgtgctgc tgagacagcc
    25141 aatattattc ccattgttcg cgttacagct gcaattgaac gcgacattat taaagtgttg
    25201 gacatgggcg ccaaagggat tgtggtccca catgtgaatg accgcgaaac agcagaacgc
    25261 attgtgaagc taagtcgtta ttatccagaa ggcatgcgca gtttgaatgg tggacgcgtt
    25321 gcacgatttg gcgaaattcc tttaaaagaa gcgatggctg aagcgaatgc atcgatatgt
    25381 gtcatcgcaa tgatagaaaa tatgcaaggc gtccgcgcga ttgatgaaat agtgcaagta
    25441 gaaggtttgg atatggtcat tgaaggtgcg gctgacttat cccaatcact cggcatccct
    25501 tgggaaacaa gccatgatca acttcaacga gcgattcagc atgtctacac aactacgacc
    25561 actgcaggca aacagttttg cgctttgccg agagatgacc aacaagtgca acgatggcaa
    25621 cagcaaggcg tgcaatgttt cctcatgggc gatgaccgcg ggaaactgta ccgtcattta
    25681 aaacacaatt tagcacaggt gaaagaggtg acagctcatg acggcgattc atacattagt
    25741 taaacagctc aaacaacaag gcccgctctg ccattttatt tatgatatgg acgggctacg
    25801 acaacatctc gaaactgtga catcacagct ccctgacaat tgtgaaatgt attatgcaat
    25861 gaaggcgaac agtgagtctg agatattagc cgcgattcag ccccatgtcg ccggcttcga
    25921 agtggcgtca gaaggtgaaa ttgcaaaagc attggtacat acgacagcag aacatgtcat
    25981 ttttggtgga ccgggaaaaa ctgacgaatc tttacgatac gcgattcaac aagggattcg
    26041 acgcattcat gttgaaagtt tatatgaatt agagcgatta aatgcattgc ttaaacaaga
    26101 aaatgcgacc atgtcaattt tgctgagagt gaatttagcc ggaccttttc cagctgcgac
    26161 gttacatatg gcaggtcaac cgacacaatt tggtattgat gaaacagaag tcgacacggt
    26221 cattgcaaca gcgcaaaata tgccacgtat ccaattagaa ggctttcact ttcattcgat
    26281 ttctaacaac ttagatgccg ccttgcattt acaagtgatg acgttatatt tccaaaaggc
    26341 aaaagcatgg gcagcacaac atgactttac attgcaacac ctgaatgtag gtggtggtat
    26401 cggtgtgaat tacgctgact taaatgaaca atttgactgg acgtatttca cgacagaact
    26461 gtccgctttg attgaagaag aaggtctaca aaatataacc atcaactttg aatgtggtcg
    26521 ctatatggtg gcacatatcg gctattacgt aaccgaagta ttggatatta agcgtgtgca
    26581 tggcgcgtgg tttgctattt taaaaggggg cacacaacat ttcaggctgc ctgtctcatg
    26641 gcaacataat cacccatttg aaatattgcc gctaggtgaa caggtaaatc aaattgcacc
    26701 aagaacaatt gaacaacagg cagtgacgtt cgtcggtcaa ttgtgtacgc ctaaagatgt
    26761 gtttgctaaa gcggtggaga taccagcgct gtctacaggt gatgcggtta ttttcatata
    26821 tgccggtgcg tatggttggt cgatttcaca tcacgacttt ttaagccatc cgcatccgca
    26881 atgcatttac tggtcaagtg agaaggaggg agaatcatga aacagattta cgacacattg
    26941 caactcattc ctgtcgacaa gattgacctc cacgaagcat ttgaaccgag tcgattagaa
    27001 aaaacgaaag agagcattgc taaagaacag catttacgtc atccagtgct cgtcgttaaa
    27061 acattatttg gtcgctatat ggtcattgat ggtgtacacc gatttatgag tttgaaagca
    27121 ctcggctgtg aagttattcc agtacaagtg attcagcgca cacagtactc cattggcagt
    27181 tggcatcata aaattcctaa tggtgcatgg tgcgaagggt taacggatga ggaactatta
    27241 ccgtggacga cagaagttcg cgatgaaaca ccttttatta cgatgtgtga tcaacagact
    27301 gaacattatt tatatgtagc agatttaaca gtagataaac tagatatttg gaaaaaggtt
    27361 gtgaacagtt acagtgcgag ctgcaacgtt gaacgtgttc cgcatagcgc ctgtttgtgt
    27421 ctcgacagca atgatatatt aatgaagtat cagccccttc aaattggtga aattgaagct
    27481 gttgtgcaaa gaggtcaaac tgtaccagcg ggtgtcacac gttttaacat tgcaggacgt
    27541 tgtttgaatt tacaagttcc gctccattta ttgaaaaata gcaatttagg taatcaggaa
    27601 cagtggcata catttttaca gaagaaaatt gaaagcatgc gttgctatac tgaaaagata
    27661 tatttaatag aagcggagta aagcgcatca tcatttatat tcatatgaag taaaaaagct
    27721 ggggaacaat gacgttttcc cagtttttct tgtcactctt tgttgagaaa gggttcattg
    27781 aaatctcgcc ctttgagata cattggctca aataggcgag acgcttgagg gatgatgtta
    27841 aaggtcaaag gaatgtcact taactttaaa agtggttagt gtttatcgca ctagctgttt
    27901 tacgttgtga catagaaaag tttcagtctt tatccattca tagatttaag aatcatcaat
    27961 aactagagga ggacatattg aatgaaataa taaatggcta aaaaatttgt gacaatccat
    28021 aagcttgaaa agaaaacagt aggcagtttc gtcaacattt ttaacgctgt cccatcccat
    28081 tcaggctgag ggcgtgcgaa tgtaagttgt ataatcgtaa tcgtcgactg aataatttca
    28141 cctaacagtg tcccaagtat gaaatggtaa acgagcatat aaatgaatga atagttcgtt
    28201 aaattttcag actgaatacc taaatagcca atgagtatta aaaaggcaat gatgagtaac
    28261 ggaacagcct ttcttgacgt tttccatgta aagtaaatga aaacaagaat ataaagcata
    28321 ataaacaatg cgccttgtcc cttactttgg atatacaaac ctaaaatcaa catgataggt
    28381 gacatgagat agccacctaa tgtcgtgatg atatggcctg aacgacttct actagcggtg
    28441 acagcgtagc cttgttggcc tgttgcgtta cgttcacgtc ttgttgtaac aacgacaaaa
    28501 tctcgtacac gtccgcctga taaacgatta aagagtacat ggccaaattc atgtgtcaag
    28561 actggaatat aattcagcgc aatgtctaat aatgaaaaaa taggacggta tgcataatgg
    28621 cggcttacga ggtagaggcc tgcgatacat aaaagtaaaa taaatgaaat agggataggt
    28681 gaagtaatcc acgaatatcc gtgcatagat gtcaatcctt tcgcaaaact tactttctat
    28741 tataacgggt ctattgcgtc tgaactatag acttaagtcc taaagtgtat cattcagttg
    28801 acgtattact tttgtaggat tatccgcgac atccgtagat gcaggcacag cacgtgtcac
    28861 gatacgtcta gcagcaacgg tagccccttg atgtactgta acaccgggga gggcgggcac
    28921 atctgcatcg atccatacat catcttcaat agtcattttt ggtccttgtt caatccctga
    28981 acgacgtttt gttggatcaa gtggatgatt gacagtaatc agttgcacat ttggcctgat
    29041 ttttgacgtt attgttgata aaaataggcc aatatcaaac catgtgttgt gcttattcac
    29101 ataaacgttg tcacctaaat gaatattgta atcatagtcg aagtagaacg gtggctcgat
    29161 gtaacaatga ttttgtacgt gacctatcat gtgtgtcaaa tactgttcgc gttgtgcgat
    29221 gtcggtcctt gcattgtagg tattgcgagc taatgcggct tgttaacggt catctacgag
    29281 cgttgcatcg cttggataat aaggtgattc attgattatt ttttgttatc agtcatagga
    29341 gcactccctt cccgtaatgt cgttttaaat gatatgcaac gcatcaaaaa agcggacatc
    29401 taaaacatta aaaataatgt atcatcatct cggactttgg aatgaacttt caataaaaag
    29461 taggatttag cttgattttg gtgtaaaatg tgttaaagtg acatcaatat attgtaaata
    29521 ccatgtaaaa caaattgaat tgaaattaaa tgaaagattg aaggtgagac tatggctaaa
    29581 gcattgccta ctggtcatca tgagggcact tttcctagtc gtgacactac agtagaggga
    29641 acatatacgt ttaaagagaa aaaagcgcaa gtccaagtga tgaatgtgat gtttgataat
    29701 gttacattga tggacatgca tcaaaatatt ttaaaatata tgcatactga aacgaaacat
    29761 aatttattta ttgtgacggc taacccagaa atcgtccatt atgcatcaga aaacccatta
    29821 tatgctcaaa tgttgaaaca agcagacttt atcgttccgg atgggacagg cattgttaaa
    29881 gctgcttgga tattaggtca acctttacaa gaacgtgtac cgggtattga agtaatggaa
    29941 acatgtttaa atattgcaga tttagagcgt aaaaaagtgt ttttacttgg cgcaacatct
    30001 ccagttgttg aaaaagctgc acgacgtatt caacgtcagt acccacatat cgatatccaa
    30061 acgcatcacg gatttatcga tattactgat caaaacgtca tcgaacaagt acgtgatttt
    30121 aatccagatt ttatttttgt aggtatgggc tatccgaagc aagaacaatg gattcaacat
    30181 aaccgtcatc atttcgatca tacattgatg atgggtgtgg gcggctcaat cgatgtttat
    30241 agtggtgaag tgaaacgcgc accttacgta tggagagcga tgaatctaga atgggcttac
    30301 cgagcgttga cagatataaa gcgaattcac cgtttgaaaa gaattcctaa gtttgtcgtt
    30361 ggtgtgtata aacaaaaata tttaggtaaa tagtgtagat aatcaaagcg cgcgtcagac
    30421 catttcgatt gtgattagaa gtgggatgaa gcgcactttt tttattaagt tcacaataaa
    30481 tacaaaaaat gaggcatagt ctcagttgaa atggggtaaa aattcactgc atcgaccaca
    30541 caacccatag attcaacgtg attgatgcag tgtgtgggct gcaattatta cacgtatacg
    30601 gaaaagttat ttgatgacaa agcgattttc atctaaagct tgacgaaatg ccttttgttc
    30661 tgcagtcgat tttttcttga aatctttcaa aaaggcttca tatttaggaa ggacatcttc
    30721 cacagaaccg aaatctttaa gttgtccggc ttcgatccaa gcaatttttg tacaaaattc
    30781 tttcacttgg cgtaagttgt ggctgacaaa gaagattgtt ttttcatctt ctttaaattc
    30841 ataaatcttt ttcaaactct tttgggtaaa agtttggtca cctacagaca acgcttcgtc
    30901 aatgacaaga atttctggat tgattgtcgc actaatggaa aagccgagtt tcgaacgcat
    30961 cccgcttgaa tattttttta cgggctgata aataaactca cctaattcgc taaattcgac
    31021 aatttcgggt gtgagtgctt taatttcatt ttttttgaaa cccatgcaca acattttgaa
    31081 ctcaatattt tccatacctg ttaagttgcc attgagtcca gcgttaattg cgatgacact
    31141 tacatcgcca gttttatcaa tatgcccgtg tgtcggtgtg agcgaaccac caatcatatt
    31201 gctcaatgtc gatttaccgg agccattaat cccgactaaa ccgataacat cacccgcgta
    31261 ggcttggaat gtgacatctt tgagtgcata aaatgttttg tttttatgtt ttggccatat
    31321 agcatcttta atacgttctt tattattacg ataaatacga tattctttag tcacttcgtt
    31381 aatactgaca gttggattca tctgtgaaca gtccttacat tgataatatt gaaatgaaat
    31441 ttggtttttg cttccatcat cttatgtcta tacattataa tatattacta agtggttgtt
    31501 aaatttgtga agctattgta aagtattatg gatacaatgt atttaattct acttaaatca
    31561 acttagcttt tcaattaaag aataggcgat gagacatact aggtcaaata ttaatgtata
    31621 atatgatttt gatgattggc tctagatgga ttatctagca tgtgaaagcg tggtaaatta
    31681 tgaattctgt tattaccgta atgaaagaac attttaagag tttttatctg attcagcggt
    31741 tagcacaatt ccagcttaag atttcaaatc ataataacta tctcggattt gcttgggaga
    31801 tcattaatcc tgtgatacaa attatggttt actggtttgt cttcggtttt gggatcagaa
    31861 gtaaccaccc gattgatggc gtccctttta tttattggtt gctcgtcggt attagtatgt
    31921 ggttcttcat taatcaaggt attttagagg gaacaaaatc gataaccatg aaatatggac
    31981 aggtggcgaa aatgaacttc ccactttcta tcattccgac atacatcgtc acaagtaaac
    32041 tgtatgggca cattatgctt gtggtagcga ttgtcatttt gtgtacagtg agtggtatga
    32101 caccaacgat ttatattctt caactgttca tttatatccc gtttgcgttt tgtttgacgg
    32161 catcagtgac gctcctaaca tcaacattag gcgtgcttgt ccgtgatacg caaatggcaa
    32221 tgcaagcttt attaagggtt cttttctatg cttcaccgat tctttggacg cctccagcag
    32281 gatcgttagc agaaaagatt ttaatgttta accctattta ttttgtagcg gagagttacc
    32341 gtgctgcgat actatttcat gaatggtact ttattacgca ttgggaacta gcactttaca
    32401 atgtgtgcgt tacagcgatg ttatttatta ttggttcgat gttacatatg cgctacagag
    32461 atcacttcgc agattttatg taatgagaac agtccctcaa tacattagat ttgtgttgag
    32521 ggttttgttt taaataacat tttagggtgg tgaagaaatg atgcgttatt atatcaaagc
    32581 attttatatt tgtatggttg cgtgtttaag tcgactgtac agtgcgttac gtatcgatag
    32641 aaaacatatt gtctttttaa tgacttttaa agaagatcaa ttaccaatta tatatcaact
    32701 gagtcaacgc ggttttaaca ttactgtttt tgcaaagcct aaagattttc actatttaga
    32761 aaatagaaag cagattacgt attatccttt gaaacaatct tctattttaa agcagttagc
    32821 cgcattagct accgcaaaag tggtgtttat tgacacatat tatttaatta tggcagggtg
    32881 gcgcaaaaaa gaaggccaaa ccgtcattca aacgtggcat gcggcaggtg cattgaagaa
    32941 gtttggttta gaagatcatt cagtagattt gactcaaaaa gaacatgtgg atcaatattg
    33001 tgcagtgtat caagcgaccg ataaatactt agtcggtggt caacagatgg cagattgctt
    33061 tgaaaaggcg ttcggggcac gttatgaaca gctgctcagt tttgggagtc cgagattaac
    33121 gacataccga catatcgacc gacatgcgca tcagcaaaaa cttaaaaaac aattaggtat
    33181 tcaaaacaaa gtcgctgtct atttaccgac ttatcgtgaa ggcgggcaaa cgaaccgtac
    33241 gattgacaaa gaaacatttg agactgcggt gcctggctac acgttgttaa gtaaatatca
    33301 tcctactgtt tccgcagcgg cagaaaatat taaaatgtgt acgcttgatc ttatcgtatt
    33361 ggcagattta attattacgg attacagttc tttagcgata gaagcaagca ttgtcaatac
    33421 gccaacttta ttttacgtat acgatgaggc ggattatgaa atcgtacgag ggctcaacaa
    33481 gtattattat gacatcccgc aagaatataa agcgtatgac gagcgcacat tgtatgaacg
    33541 tatcaacgaa ggtcaattac aaccattatt ccaaaaatgg catcaataca atacaagtga
    33601 aagcttaaat caagtggtca actatgtaga aaaactcgtg agaatttagc gtaaacactg
    33661 gatattttta ggaatcgaga aatgtttatg ctataattct acaaaatgaa gaaaatatta
    33721 aacatgttaa ggaggtgtaa agatgaaacg tgtcattaca tatggaacgt atgatctttt
    33781 acactatgga catattgaat tactaagacg tgcacgtgaa atgggggatt acctcgttgt
    33841 agcactctca agtgatgaat tcaaccgcat taaaaacaaa aaatcatatt acaattttga
    33901 acaacgtaaa atgatgcttg aatcgattcg ttacgttgac cttgtcattc ctgaaaatga
    33961 ttggggccaa aaagaaaccg acgttgagaa gtatgaaatc gatacatttg taatggggca
    34021 tgattgggaa ggcgaatttg atttcttaaa agataaatgt gaagtgattt acttgaaacg
    34081 tacggaaggt atttctacaa cacaaatcaa acaagaatta tacggtaaag acgcaaaata
    34141 atgggaataa aaaaagaccg aaagcgtgtg gagtatcgca ttttcggtcc ttttttatga
    34201 ctgttattct gaagtttgac ttacataaat atgtcgaaaa ataaaggaca gaaaacctgt
    34261 gacccctttc cattagcatg tctcctctat agtcaatctt tagagaaata taacacaaat
    34321 tgaatcaatc taagttgagg aggatttcac aatttctaca tacaagtgcc ttttaaattt
    34381 aaaagcgata caacttgatt aaaagcacaa gaaagaggtg aacctcgctt ttcggaattt
    34441 gaagacacag ttagcgttcc aaaaattata ggtccaagtc gatgacaata aatgttcaaa
    34501 agtgaagcta cataaatgac tgttttttca taaagacgta gcaaatttat atg
//
LOCUS       DANHPA010000012        32167 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.012, whole genome shotgun sequence.
ACCESSION   DANHPA010000012 DANHPA010000000
VERSION     DANHPA010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 32167)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32167)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32167
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.012"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            51..503
                     /locus_tag="PTC28_000476"
     CDS             51..503
                     /locus_tag="PTC28_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DM13 domain-containing protein"
                     /protein_id="HDK5715795.1"
                     /translation="MNMKMALVSGALATTFLLGACGNDNADKAKEDNKAESSMHDKKA
                     NESKVDNSKVMKTGTFKGENNEMVKGKAEIKDGKLMLTDYESSKGPDLHVYLTKGNVI
                     KNGVKLDAVKYNEATQTFDLKDVNAADYDTVTIYCDKAHVIFGSAELK"
     gene            543..1001
                     /locus_tag="PTC28_000477"
     CDS             543..1001
                     /locus_tag="PTC28_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDK5715796.1"
                     /translation="MAIAYKVLILIIRLGSGFYILMQGFEKLTGGFAIDGLVSVIRDN
                     QDSPQWYKTFFEFAVANHLELFKWMVQIGEIAIGLGLILGVFSYTASFFGVFVMLNYI
                     LADMIFTYPLQLLFFIILLMNRETLASLSLNHFIKRKNIRNDEHDAHTHS"
     gene            979..1665
                     /locus_tag="PTC28_000478"
     CDS             979..1665
                     /locus_tag="PTC28_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDK5715797.1"
                     /translation="MTHILIVDDEQDIREICKTYFEYEGYHVSTASNGIEALDLLNTN
                     VDVMVIDIMMPEMNGYEVVREMKNQGLDIPYVYLTAKTSEQDTIFGLMLGADDYVKKP
                     FSPRELVIRVKNLMNRVNVTSPSTQETIHCGRLVLNNLNKTVELEGEVIPFRIKEFEL
                     LWYFANHESVALSKTDLLEQVWGYEYYEDMNTLNVHVHRIREKLEKYGYDDYIIATVW
                     GLGYKFQRQL"
     gene            1666..2700
                     /locus_tag="PTC28_000479"
     CDS             1666..2700
                     /locus_tag="PTC28_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDK5715798.1"
                     /translation="MTIRKQLIYSFIVTIITTTFLFYTLYKLMWFDGPLTILLTLCSF
                     LSGMMTLIIGIFFTVPMIKKIERLNHKTQKIANGQFETEKTKIHAPKEIQQLSESFDQ
                     MVDKIQEQMNLIKEEQEEKMNLVQNLAHDLKTPLASIKSYSEGLRDGIIHSECDTKKA
                     YSILISQSDRLSRMFDDLTDVITVNHQESEQTLIHMDQLLIPIFEIYSQKLHHENRQL
                     DVEIDPNIKPFIQDQRAIERILMNFIDNALKFSDHGSPLAVKVFEENDEIAISVIDQG
                     MGIMESDIKNIFERTFRVESSRHKDTGGSGLGLYIAKTLAHQMDGHIEVSSTYGQGTA
                     ITLYFPPKVC"
     gene            3204..5138
                     /locus_tag="PTC28_000480"
     CDS             3204..5138
                     /locus_tag="PTC28_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HDK5715799.1"
                     /translation="MLTNRQFEILNKVIKAQDFISIAELANEFERSERTIQYDIEYIE
                     FMKEALQLQIQRSKSNGIKIECENFSAIRQMNRATFPDVHFTKSERHLQILLHLFEAK
                     APVNSRMLSTLVNVSRRTIVDDLKDVTEWLQAQALTLRYMKNKGFVIDGDEGSYRKAY
                     GLIIHDYVKSTNELVRKTLFENEDMQWMRQMVIRTLEEKGYPLFQIALDGLVIHLLIA
                     IQRVKKQFTMEPPTEALTALIETDAFRVAQAIAVEVEQHDDIAFPISETMFIALHLLS
                     AKKLKIENDHVGTEELKILIHQFVERMSASLGIDLIRDTKLLNNLYLHLAPALNRLTY
                     RFVQHNPIKQEIYTQYMEITEVITDNIWIFEELYEVEFTDDEMAYLTLHVASAIERLT
                     QHRGRKIKIVLLCGSGIGTSQLLKEKLRKIYPEFDILNAYSLYQIDETQLKKRYVDYV
                     ITTVPIELESIECIKVTPFLDEKDREKLNDIINKERERFVHHLSRRGLQLKQVMKSEF
                     LGSIHQKMSRNEAIAEVMRPLEQAGMIHAQYKKEIINKLDEFGAYMVISPHIALLHGS
                     TEFALKGVGMTLFHFEQGVYFGHERFDPVKVMIGLATDEPQKHLTALKELSDILMDDT
                     MRVQLLNGDLTGLKNKLACL"
     gene            5151..5600
                     /locus_tag="PTC28_000481"
     CDS             5151..5600
                     /locus_tag="PTC28_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDK5715800.1"
                     /translation="MSLEMLTEDKINVKECVASWEEAIKEASQPLVEQEYISQSYIDA
                     MIDSVYRHGPYIVIAPEIAIAHARPNGNVNKVGISLLKLNQHINFGEKSHYASLVFVF
                     SAVDTHSHLDILQSLAQILGDVAIVKNLIQSQNEKEILSIIKGVEQR"
     gene            5597..5881
                     /locus_tag="PTC28_000482"
     CDS             5597..5881
                     /locus_tag="PTC28_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HDK5715801.1"
                     /translation="MKILVVCGHGLGSSFMVEMNVQEVLKQLTLKDAVDVEHSDIMSA
                     SPEMADLFICGRDLEENAARLGDVLILDNILDKAELEGKLIDKFETLDVI"
     gene            5900..7261
                     /locus_tag="PTC28_000483"
     CDS             5900..7261
                     /locus_tag="PTC28_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
                     /protein_id="HDK5715802.1"
                     /translation="MQTILDLIVDVLSQPAILVALIAFIGLVVQKKPVSVVTSGTIKT
                     ILGFLVLSAGAGVVVQSLEPFGKIFQHAFGVQGVVPNNEAIISIALEKYGTTAALIMV
                     FGMLVNILIARVSNLKFIFLTGHHTFYMAAFLAIILTVGHIKGVLTVILGALILGLIM
                     AVFPALAQPTMRKITGNDQVALGHFGTVSYWAAGEVGKLFKGHSKSTEEINFSKGLSF
                     LRESTISISLTMILLYLIASLFAGVGYVHDEISKDQNFIVFSLIQGVTFAAGVFIILT
                     GVRLILAEIVPAFKGISEKLVPHSKPALDCPIVFPYAQNAVLIGFFVSFLTGVLGMFV
                     MFLIGGVVILPGVVPHFFLGATSGVFGNARGGIKGAVAGSALNGLLITFLPLLFLPFL
                     GDLGLASTTFSDTDFLVVGIVFGNIVKYLGIVGLVIGIIIVAAVAIVLQKRGRTVSEA
                     TKS"
     gene            complement(7389..7502)
                     /locus_tag="PTC28_000484"
     CDS             complement(7389..7502)
                     /locus_tag="PTC28_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014533356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Fst family toxin"
                     /protein_id="HDK5715803.1"
                     /translation="MCEIFFHYIATTLSGCTVALFAYWLHKKDNRDKNRRL"
     gene            8316..10166
                     /gene="nrdD"
                     /locus_tag="PTC28_000485"
     CDS             8316..10166
                     /gene="nrdD"
                     /locus_tag="PTC28_000485"
                     /EC_number="1.17.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020361474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HDK5715804.1"
                     /translation="MTQLEKQLTGLMTKDPTIVNENANKDSETFSTMRDLTAGVVSKS
                     YALQHLLPPHVAMAHQKGEIHFHDLDYHPFQPLTNCCLIDAKGMMAHGFQIGNAQVTS
                     PKSIQTAAAQLVQIIANVSSSQYGGCTIDRVDELLSHYAKFNEEKHREVAREFVKSDQ
                     IDDYVDKRVTQDIADAVESLEYEINTLYTSNGQTPFVTLGFGLGIDELSRKVQTAILK
                     TRIKGLGKDRITAIFPKLVFSIKKGTNFAPEDPNYDIKQLALQCAMKRMYPDILNYDK
                     TVELLGDFKAPMGCRSFLPAWQNAQGEFENNGRCNLGVVTLNIPRIAIESAGDMTRFW
                     DLFDERMQVLHDALVYRIERVKEAVPNNAPILYKRGAFKHRINEEDPVDTFFNQRRAT
                     ISMGYIGLYEAATVFFGPNWETNPEAKDFTLNILKQMKNYQLEWTDQYDVWFSIYSTP
                     SESLTDRFCRLDREAFGDIPDITDKGYYQNSFHYDVRKDVTPFEKLDFEKDYPYLASG
                     GYIHYCEYPKLDHNVKALETVWDYAYDRVSYLGTNIPIDHCYDCGFEGDFDTTETGYR
                     CPECGNQNPETVDVVKRTCGYLGNPVQRPTIEGRHKEMCARVKHLKVRQS"
     gene            10163..10702
                     /gene="nrdG"
                     /locus_tag="PTC28_000486"
     CDS             10163..10702
                     /gene="nrdG"
                     /locus_tag="PTC28_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase
                     activating protein"
                     /protein_id="HDK5715805.1"
                     /translation="MSVLDVSTGAGYIAKIEYQSFVDGEGVRCSVYVSGCPFQCQGCY
                     NKAAQHFRYGEAMTHTVMEEVLDACAPEYIAGLSILGGEPFCNLKVVAPLVQAFRARY
                     GREKSLWIWTGYLFEYLWRANDQRTEIIKQTDVIVDGMFMQKLYQPNLPYKGSLNQRV
                     IDVHQFIKTKMMSQSIYIE"
     regulatory      10900..10998
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            11062..12339
                     /locus_tag="PTC28_000487"
     CDS             11062..12339
                     /locus_tag="PTC28_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase/cysteine synthase"
                     /protein_id="HDK5715806.1"
                     /translation="MRSDFKFETLQLHSGQEVDESSHSRALPIYQTTSFTFDDTAHAA
                     NLFGLDELGNIYTRLMNPTTNVLETRVTELEGGVAGVAVASGMAAITYAIQAVAQKGD
                     HIVASSTLYGGTHTLFTHTLPKYGIDVTLVDTTEVSHIENALQDNTKALFVETIGNPE
                     GNVEDFDALVTITKAQGIPLIVDNTFATPYLSRPIEHGANIVVHSATKFIGGHGTSMG
                     GVIVDAGNFNWDNGKFPGLSEPDPSYHGLVFSEKFGEAALAFKIRTTILRDTGAAISP
                     FNAFLLTQGLETLSLRLERHVENAEKVAQYLEKHDKVAWVKYAGLPTSEYYALKEKYL
                     PKGASSIFTFGVKGGYEAGKKFIEGLELFSLLANVGDAKSLVIHPASTTHQQLTEAEQ
                     TAAGIAPETIRLSIGLEHIDDIIADLEKGFAKL"
     regulatory      12496..12596
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            12642..14021
                     /locus_tag="PTC28_000488"
     CDS             12642..14021
                     /locus_tag="PTC28_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDK5715807.1"
                     /translation="MTRKQIHFNGFVQNSPAPHAAGLWKHPKDKGATHHNLKYWTNIA
                     QTLERGLFDGIFIADVLGTYSVYNQSHDAAVKHAVQLPAHDPIPLVSAIAAVTEHIGI
                     APTVSTTYAQPYKLARQLSTLDHLTNGRLGWNVVTSYLESEAVNLGLKERLPKALRYS
                     RADEFLQVSYQLWEDSWEDDAVVKTRETDTYADPSKVHAIHHKGTFFDIPGPHLVEPS
                     PQRTPVLFQAGASEKGKTFAAKHAEAVFTKHTSIESLRAYVTDIRTRAQQFGRNGEDI
                     LVFPMVLPIIGETEEEAYEKYEALQNEVSYEGSVALLSGHTGIDFSQYDPDEYIENIE
                     TEAMQGNLNLYTKDPHRKWTLREAVKNHGLGNGTVKFIGTPTQIADQLELWANEGGAD
                     GFNIAQAYSPGTFEEFVDFIIPELQKRGIYRTEYEGETLRENMFGKGHTKVKPTHPAR
                     NKKVNLVQI"
     gene            14032..15528
                     /locus_tag="PTC28_000489"
     CDS             14032..15528
                     /locus_tag="PTC28_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:pantothenate symporter"
                     /protein_id="HDK5715808.1"
                     /translation="MNDVKVYTWIGFIVFMALMITVGFVSSRKMKSISDFATGFGRIG
                     PRTLGLSFAATYLSAATFLGYPGWSYTWGLNNLWLFLAMFIGGPTGVLMVAKRVRSLN
                     TTQQSLSLPDWLGDFYDSSILRVGTAMILLFNIFYIASQLVAGALIFKYLLGMSYFSS
                     LIVITVIVVLYVYVGGALADIYTDALQVIMMAVAGLTIFISGIVLFWKGSIHDTFSGI
                     VQNLNHQNHYLVQVFNPDSVHFHSFTMIIGAIIIQWAFASAPHLFNKILGLKSEKDLG
                     RMIRTYIFVMSICLLVLFGGIFSRVALGGQVESSDLALLQYIEWAFPAGIVALFGVVI
                     LAAAMSTTDGLFVSISTVFANDLFLKLIVKQKWVSLEEEKANRIAFRISRVSVPVVGL
                     LSFLLVLKPPLYMSDFMWIGISGIAAGTMGPILHAVYAKQKAPGRAAELSMVVGLVSY
                     LVIYFGGVIPSTMSAGAIATILGILTITVMSSVMHHRASQLSVDKGEV"
     gene            15644..16033
                     /locus_tag="PTC28_000490"
     CDS             15644..16033
                     /locus_tag="PTC28_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase family protein"
                     /protein_id="HDK5715809.1"
                     /translation="MPIIKIDLIKGKSKDYIKEVLDISYEVMLEAFHAPVGDRYQIVT
                     QHEAYEMQILDTGLGVERTTDVLVFTLITRPRTQEQKTIFYRKLVEMLHLKLGIRKED
                     VLITLVENTDENWSFFNGEAQFLNGEL"
     gene            16398..17090
                     /locus_tag="PTC28_000491"
     CDS             16398..17090
                     /locus_tag="PTC28_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016426012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HDK5715810.1"
                     /translation="MKKIMIVNTSYDQFDGFDLPTGLWLSELVHFYDVFQNNPNYQLD
                     IYNINGGETPIDPVSMNKVTLDRLTKKYYEDETFMRKLHDSPSIDEADVTQYDVIYFT
                     GGHGVMYDFRGHDTIARAVNDIYDRGGLVSSVCHGASALLEIKRPNDHFLIEGQKLTG
                     FSNREESIARRKKQVPYQLETALKEKGALYQKSIIPLKSFVVEEEQLITGQNPASARD
                     VGEAIKLRLDVK"
     gene            17379..19034
                     /gene="adcA"
                     /locus_tag="PTC28_000492"
     CDS             17379..19034
                     /gene="adcA"
                     /locus_tag="PTC28_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding
                     lipoprotein AdcA"
                     /protein_id="HDK5715811.1"
                     /translation="MKKSFKLLATVVLSGSMLAACGQGDDKASSNDQLKVTTTVFPLQ
                     SFVKQIGGEHVEVDSIYPKGADLHSFEPTQKDIIDASKSDLFIYTGDDLDPVAKKVAN
                     AIKKDDHKLSLESSLDKATLLTDQHEHGEHEEHGEHEEHGEHEEHGEHEEHGEHEEHG
                     EHEEHGEEGHKHSEAHDEHEHHHHHGGYDPHVWLDPQLDKKFVSAIRDDLSKRDPKHK
                     AEYDKNADKVLKDLDSIDKELKDVTKDHQGHAVFISHESLGYLADRYGFVQKGVQSLN
                     AEDPSQKELTEIVKEINETGAKYILYEENVANKVTDTIRKETDAKPLKFNNMEAVSKD
                     QAKDATYQSLMKENVKNIEKALNDKIKVEDDKAANKHSKAIQDGYFKDDQVKDRDLSD
                     YAGEWQSVYPLLKDGTLDEVFEHKAEDKGDKSAKEYKAYYDKGYKTDVEKIKITDNQI
                     TFTKNGKSMTGTYTYDGKDILQYEGGNRGVRYTFKLEGDASEGLPKYVQFSDHNIAPT
                     KTGHFHIFTGNDREKVLKELENWPTYYPANLTKEQVKDEMLEH"
     gene            complement(19527..20417)
                     /locus_tag="PTC28_000493"
     CDS             complement(19527..20417)
                     /locus_tag="PTC28_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose bisphosphate aldolase"
                     /protein_id="HDK5715812.1"
                     /translation="MNQEQFDKIKNGNGFIAALDQSGGSTPKALRGYGVSEDQYTNDD
                     EMFNLVHDMRTRIVTSPSFTADKVLGAILFEQTMDREVEGKHTGEYLADKGIVPFLKV
                     DKGLEDKENGVQLMKPIPELDSLLDRANEHKIFGTKMRSNILEFNKEGIDAVVEQQFG
                     IARQIISKGLVPIIEPEVNIDAEQKAEIEAYLAESIQKQLDKLGSEDYVMLKITIPTQ
                     KNQYQSLINHPNVVRVVALSGGYSLEKANEFLKTNHGLIASFSRALINDLRVSQSDEE
                     FDRLLGQTIDAIYDASVNKV"
     gene            complement(20824..21510)
                     /locus_tag="PTC28_000494"
     CDS             complement(20824..21510)
                     /locus_tag="PTC28_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate decarboxylase"
                     /protein_id="HDK5715813.1"
                     /translation="MKEYRHYIHQVGTMKSLLEGHLESEVTIAELLRYGDYGFGTLNH
                     ADGDFVIIDGQPVHMNQFDEHHGLNGREKVPYGAIYRDRAQLTFDITDMHHTYVFERI
                     KQKFESNQLFSITRIHGDLSDLHLSIYEKHPVIEPSSQHIQPITLSEVERTIREIKGT
                     ILVLFTPHELSGIHPPGFSAYFVSEHHHIVGKVMSFNVVAARASFQSFDGFSVICPTV
                     EPLFIPYFPE"
     gene            complement(22002..22937)
                     /locus_tag="PTC28_000495"
     CDS             complement(22002..22937)
                     /locus_tag="PTC28_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HDK5715814.1"
                     /translation="MKKIAIAGAGAMGGRIGSQIKEAGYDVKLIDMWEEHVNTINEKG
                     LEIQTETDTYTLEIPAVLPHQVNETFDLVIILTKSMQAKQMLRTLYDNKAINEDTALL
                     SMMNGLGHGDRLSAIVPKTQIFLAVTMWTAGLRGPGQLLLEGQGSIEFQRADGQADER
                     TERINQVFNDAKLNAKISDNVFKSIWSKATLNSVLNPLCTILDKTINEFSQYEKARDI
                     VEPLIGEIVAVAEARGVSLSAAALLDKIEAAYPNEAQGLHYPSMHQDLYNGRYTEIDY
                     LNGQIAKYGRELGIATPNNEMLTHLIHELEMKHVK"
     gene            23207..24585
                     /gene="uhpT"
                     /locus_tag="PTC28_000496"
                     /pseudo
     CDS             23207..24585
                     /gene="uhpT"
                     /locus_tag="PTC28_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498780.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hexose-6-phosphate:phosphate antiporter"
     gene            complement(24788..25531)
                     /locus_tag="PTC28_000497"
     CDS             complement(24788..25531)
                     /locus_tag="PTC28_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDK5715815.1"
                     /translation="MYKVVICDDERIIREGLKQAISWEDYHFHEVWLAKDGIEGLSLI
                     REHQPDLVITDIRMPRMDGVELLEAIKDLPCQKIILSSYDDFEYMQAGIHHHVLDYLL
                     KPIDSEQLNQRLAQFVPLAHEQKTTMTTTLPIFQSLMKLEYPDYYVNYVVQHIHHHYD
                     QKWQSNALTTELGVSESYLMRIFKTHVGITMLDYLNRYRIYQAMSLLQSGDKHYEIAH
                     KVGFSDYKSFSYHFKKYLKMSPREYVNSK"
     gene            complement(25524..27077)
                     /locus_tag="PTC28_000498"
     CDS             complement(25524..27077)
                     /locus_tag="PTC28_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDK5715816.1"
                     /translation="MKTYQPYRYQLRRSLFISTILPVFLVILLGLVSFYTLYIWVEHR
                     HIHQHLHEAEHDLAHTENQIKTTLQTEKSTLKQLDLSKKSDVTTFKRLLLELVHQQPG
                     TVYYVVDNGKTSITNNYEKKDVHQLYLMHQQRIQLLHESVALSFYLAQTPHIEEIQDR
                     YGHTTLILDRFDNILYSNSEHFHVDDAFPPPPFGFISERIRLNDKGEQMIQFKDIHDA
                     LEDGLRLLAIICIAFVLLMIFGFMNAHRMAKRQTRDIELMIDRINQAQRRELGAYQPL
                     GQPSELEDINTYIYELVESNETLIHSIEQTEQQLRKIQLKEIERQFQPHFLFNTMQTI
                     HYLITLSPHQAQKVVQQLSQMLRYTLRVKTDKVPLKEELAYIQKYVTIQNIRFDDSIT
                     LNIDMGHRLENELIRKMMIHPLIENAIKHGRESEPLIITIRIKQTAKYLRIFVHDNGM
                     GMTVDRRAQVRQMLQENVFDTSHLGLNHLNHKVQIQYGVRARLRIFSAYQQGTLIAFQ
                     LPREEQTDV"
     gene            complement(27074..28027)
                     /locus_tag="PTC28_000499"
     CDS             complement(27074..28027)
                     /locus_tag="PTC28_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HDK5715817.1"
                     /translation="MKKWLWCLLIILLCGCQQDTSNANDTLTIYSPYPKHLIQPILKD
                     FEHQENVKVTVIEDSTQVLLSKIHQTPKHGRGDIFVGGVLSETIEHPEDFVPYKALDL
                     SKFRISLSNQPIVTPFILMPTVIVVNTDLQGDIHINGYSDLMQPALKQKVAYSNPKTT
                     TTGYQHMRGLYHIHHNTDAIHQFRQQAVALSKSSDVIAQVAQGRYYAGLSYEQDARTW
                     LQKGYPLKVIYPDEGTVLNIDGIALVNSQHPHPKRTALIHYLTSYTVQQRLAQENGVK
                     PIRRDVSEIKEPGIAQLRDIPVIPETALPHETHQKFLERVE"
     gene            28406..29269
                     /gene="galU"
                     /locus_tag="PTC28_000500"
     CDS             28406..29269
                     /gene="galU"
                     /locus_tag="PTC28_000500"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HDK5715818.1"
                     /translation="MKKITKAVIPAAGLGTRFLPATKAMPKEMLPILDKPTIQYIVEE
                     AVRAGIEDIIIVTGKHKRAIEDHFDNQIELEMNLAEKGKDDLLEKVQHATQLANMFYV
                     RQKEQKGLGHAIWTAKQFIGDEPFAVLLGDDIVESETPAIQQLMEEYERTGKSVIGVQ
                     EVPERETHRYGIVDPKNQQERLYEVTQFVEKPVFGTAPSNLAIMGRYVLTPDIFDYLE
                     NQEEGAGGEIQLTDAIERLNQSQQVFAYRFEGERFDVGEKVGFVKTTIQFALRDAEMA
                     DEIRAFLKEVQ"
     gene            29459..30766
                     /locus_tag="PTC28_000501"
     CDS             29459..30766
                     /locus_tag="PTC28_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDK5715819.1"
                     /translation="MLLFTIEILIMILAIVLGLRTAGALGCGIFALVAQIVMIFGFGL
                     PPGSAPVTAVLIILSIGIAGGTLQATGGIDYLVHLASKMIERFPKSIIFIAPMIVFVF
                     VFGIGTTNIALSLEPIIAKTALKARIQPKKALTASVLTANIALLCSPAASATAYMISE
                     FAGLGISMGQYLSIVLPTALLSMLVLSCFNTFVGRTKIDEQHAQTMLQKMAVDQEETT
                     KQYDTRVKLGVFAFIVAVGFILLFGIFPEVGPKFQVDGKVVELQMTDLVQLFMYMSAM
                     INLLLVKVQPNQILTTHITQAAIGAIFAVLGPGWLGATIFSAPSNRAMMEDGIGGLIA
                     QAPWLIIILVGLVAMIVISQSATASIMVPIVLSLGIPPMFFIAIVQTLNVNFVIPAQP
                     TILFAVDVDETRSTKVTSFLIPGFFLITTTVVIGLTIKTILGM"
     gene            complement(30922..32112)
                     /locus_tag="PTC28_000502"
     CDS             complement(30922..32112)
                     /locus_tag="PTC28_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbfB/YjiJ family MFS transporter"
                     /protein_id="HDK5715820.1"
                     /translation="MREIQDLRIHGYRQLALGMIALFIVIALGRFAYTPILPFMQLDT
                     GLDNKSVGLLATFNYLGYLIGAMLPIFYIMKNKVFDLKCYLLLNVATMLLFGVTDHFV
                     IWSLLRLLNGISSGAVFVLASNIVLEALHLARREGIAGLLYSAVGLGLFSSSLFIFLY
                     TDVTHWRETWIWLGSAAFILTLIIIVCLRENPTLPEPASHEAHGPEKVIRYSKKFYIP
                     FAIAYFCEGAGYIITGTFLVAIVKTMPTLSEYAALSWMFVGLGAIPATVLWSMIGQRI
                     GICLSVILAFLLQIVAVLMPIFTVNAFAIALSSMIFGATFLGLTTLFMSKSHQITFET
                     KGNNLVAVMTLIYSVGQMIAPYISGILIERTHSYNDALIFAAAILVFGILSSLYSKRY
                     AHPM"
BASE COUNT        10179 a         5477 c         6585 g         9926 t
ORIGIN      
        1 aagcatatat catgatacat gtaatcccaa aaagaaagaa ggaatttgtt atgaacatga
       61 aaatggcatt agtttcaggt gctttagcga caacattttt gctaggtgct tgtggtaacg
      121 acaacgcaga taaagcaaaa gaggacaaca aagctgaatc ttcaatgcac gacaaaaaag
      181 cgaatgagtc taaagtagat aattcaaaag taatgaaaac aggcacattc aaaggtgaaa
      241 acaacgaaat ggtaaaaggt aaagctgaga ttaaagatgg taagttgatg ttaactgact
      301 acgaatcatc aaaaggtcca gatttacatg tttacttaac aaaaggtaat gtcatcaaaa
      361 acggtgtgaa gttagatgca gttaaatata acgaagcaac tcaaactttc gaccttaaag
      421 atgtcaatgc agcagactat gatacagtaa caatttactg tgacaaagca cacgttattt
      481 ttggttctgc ggaacttaaa tagttagacg gaatcgacat catgaagaaa ggagagtaac
      541 atatggcgat agcttataaa gtcttaattt tgattattcg cttaggatca ggtttttata
      601 tcctgatgca aggctttgaa aaactaacgg gtggttttgc gattgatgga cttgtttcag
      661 taatccgtga caaccaagat tccccacaat ggtataagac attctttgag tttgcagttg
      721 caaaccacct ggagcttttc aaatggatgg ttcaaatagg tgagattgca attggtttag
      781 gtctcatttt aggtgttttc tcatatactg cgagtttctt tggtgtgttt gttatgttaa
      841 attatatttt agctgatatg atttttacgt acccacttca attgttgttt ttcattattc
      901 tattaatgaa tagagaaaca ttagcatcat tgagtttaaa tcatttcatc aaacgtaaaa
      961 atataaggaa tgatgaacat gacgcacata ctcatagttg acgacgagca agacatccga
     1021 gaaatctgta aaacctattt tgaatacgaa ggctaccacg tttccacagc atcaaatggc
     1081 atagaggcac tcgatttatt aaatacgaat gttgatgtta tggtaattga tattatgatg
     1141 cctgagatga atggatatga agtggtacgc gagatgaaaa atcaaggact cgatatccca
     1201 tatgtttact taactgcgaa gacaagcgaa caagacacca tattcggttt aatgttaggg
     1261 gcagatgatt acgtcaagaa acccttcagt ccccgtgagt tagttatacg agtgaaaaat
     1321 ttaatgaatc gtgtcaacgt cacaagtcct tcaacacaag aaacgattca ttgtggcaga
     1381 ctcgtattaa ataacttaaa caaaaccgta gaattagaag gggaagtgat cccttttcgc
     1441 atcaaagagt tcgaattgct atggtacttt gcaaaccatg aatcagtcgc tttgtccaaa
     1501 acagatttgc tagaacaagt ttggggttac gagtattacg aagacatgaa taccctaaat
     1561 gttcatgttc atcgtatacg cgaaaaacta gagaaatatg gctacgatga ctatatcatt
     1621 gcaacggtat ggggattggg ctataaattt cagaggcagc tttaaatgac gatacgcaag
     1681 caattaattt attcgtttat cgtcacaatt atcacaacga cctttttatt ctatacgcta
     1741 tataaattga tgtggtttga tggaccgtta acgattctat taacgctatg ttcatttctt
     1801 tctggtatga tgacactcat tatcggtatc ttttttacag tccccatgat taaaaagata
     1861 gaaaggctga accacaaaac tcaaaaaata gcgaatggcc aatttgaaac agaaaagaca
     1921 aaaatacatg ccccaaaaga aatacaacaa ttgagtgaat cttttgatca aatggtcgat
     1981 aaaattcaag agcaaatgaa tcttatcaaa gaagagcaag aagaaaagat gaatttagtt
     2041 caaaatcttg cccatgattt aaaaacaccc ttagcaagta ttaagtccta ttcagaagga
     2101 ttgcgagacg gcattatcca tagtgaatgt gatacgaaga aagcatacag cattcttata
     2161 agtcagtctg atcggttgtc gagaatgttc gacgatttga cagacgtcat cacagtcaac
     2221 caccaagaaa gcgaacaaac actcattcat atggatcaat tgcttatccc aatatttgaa
     2281 atttattcac aaaaattaca ccatgaaaac agacagcttg atgtagaaat agatcctaat
     2341 atcaaacctt ttattcaaga ccaacgcgcg atagaacgta tcctcatgaa cttcatcgat
     2401 aacgcgctga aattttctga ccacggttcg cccttagccg tgaaggtctt tgaagaaaat
     2461 gatgaaattg ccatctccgt cattgatcaa ggtatgggta ttatggaatc agatatcaaa
     2521 aatatatttg aacgaacttt tcgcgtagaa agttctcgac ataaagatac aggtggttct
     2581 ggtcttggtt tatatattgc taaaacttta gcgcatcaaa tggatgggca tatcgaagtg
     2641 agtagcacat atggtcaagg gacagcaatc acattatact tccctccaaa agtatgttaa
     2701 atataaataa taattctcaa actcagtact tctcaaacct ttcataaatt atatagatag
     2761 atattacagg cgttaggcat agtcctagcg tcttttttga tggatggaaa gctaaacgtt
     2821 cagaaatata gctttctctc ttcacattct ttcatctcac ctccgtctct tttttgttgc
     2881 aattgcacat ctctctcata ttgtttcaca ctttaaaaat gcgcataaat aggtgttatt
     2941 tctttcttta tttcaatttc ctatatgttc aaacttatcc atttttatat taatcatgat
     3001 tttatgtttt tgaaaccgct ttgattatga atcgtttaag gttttaataa agacaactac
     3061 agtgtggtgc aaagatgcgc gtgtagtgag ttctgtcgtt tccttcgagc tgcatatgca
     3121 aaatttcgtt ttgagaactg aagtgaattg cacatctata aaacgactgg agctattaca
     3181 ataatgacat aggaggttga acgttgctaa cgaacagaca atttgaaatt ttaaacaaag
     3241 ttatcaaagc tcaagatttc atttccattg ctgaattggc aaatgaattt gaacgctccg
     3301 aaagaacgat tcaatatgat attgagtaca ttgagtttat gaaggaagca ttacaattac
     3361 aaattcaaag gagtaaaagt aacggcatta aaattgagtg tgaaaatttc agtgcaattc
     3421 ggcagatgaa tcgtgcgact tttccagatg tgcattttac gaaaagtgaa cggcatttac
     3481 aaattttatt acatctgttt gaagcgaaag cacctgttaa ttctcggatg ttatctactt
     3541 tggttaatgt gtcgcgacgt acgattgtag atgatttgaa agatgtgaca gagtggcttc
     3601 aagcgcaggc gttaacttta cgttatatga aaaataaagg gtttgtcatt gatggagatg
     3661 aagggagtta tcgcaaggct tatggtctca ttattcacga ttatgtaaag tcgacaaatg
     3721 aattagtacg caagacatta tttgaaaatg aagatatgca gtggatgcga caaatggtca
     3781 ttcgtacgtt agaagaaaag gggtatccac tctttcaaat tgcgcttgat ggattagtga
     3841 ttcatttgct cattgcgata cagcgtgtta aaaaacaatt tacgatggaa ccgccgacag
     3901 aagcactcac agcattgata gagacggatg cattccgagt tgctcaagcg attgcagtcg
     3961 aagtcgaaca acatgatgac attgcgtttc cgatatcaga aacgatgttc atagcacttc
     4021 atttattgag tgctaaaaag ttaaaaattg aaaatgatca tgttggcact gaagaactta
     4081 aaattctcat tcaccaattt gtcgaaagga tgagtgcgag cttgggcatt gatttgatta
     4141 gagacacgaa attgctcaat aatctctatc tacatttggc tcctgcactc aatcggttaa
     4201 catatcgttt cgttcaacat aatcctatta aacaagaaat ttatactcag tacatggaaa
     4261 taacagaagt gattaccgac aatatttgga tttttgaaga attatacgag gttgaattta
     4321 cagatgatga aatggcatat ttaacacttc atgtcgcttc ggcaattgaa agattgacac
     4381 agcatagagg tcgaaaaatc aaaattgtat tattgtgtgg ctctggtatt ggaacgtcac
     4441 aattattaaa agagaagtta cgaaaaattt acccagagtt tgatatttta aatgcttatt
     4501 cgttgtatca aattgatgaa acacagttga aaaaacgtta cgtcgattat gtcattacga
     4561 cagtaccaat cgaattggaa tccattgaat gtattaaagt gacacctttt ttggacgaga
     4621 aagatagaga aaaacttaat gacatcatta ataaagaacg ggaacgcttt gtacatcatc
     4681 tatcaagacg aggcttgcaa ttgaaacaag tgatgaaatc tgaatttttg ggatcgattc
     4741 accaaaagat gtctcgaaat gaagcgattg ctgaagtgat gcgaccgcta gagcaagcag
     4801 gcatgattca tgcacagtac aaaaaagaaa ttatcaataa gttggatgag tttggggcat
     4861 atatggtcat cagtccgcat attgcgttac ttcacggcag tacagaattt gcgttgaagg
     4921 gagtaggcat gacattgttt cattttgaac aaggtgtcta ctttggacat gagcgatttg
     4981 atccggtcaa ggtgatgatt ggtttagcga ccgatgaacc gcaaaaacat ttaactgctt
     5041 tgaaagaact gagtgacata ttgatggatg acaccatgcg tgtccaactc ttaaatggag
     5101 atttgacggg attgaaaaat aaattagcgt gtttgtaaag gaggccgaat atgtccttag
     5161 aaatgctgac agaagataag atcaatgtga aagaatgtgt ggcatcgtgg gaggaagcaa
     5221 ttaaagaagc gtctcaaccc ctcgtagaac aagagtacat tagtcaaagt tatatcgacg
     5281 cgatgataga tagtgtatat cgacatggtc cctatattgt cattgccccg gagattgcga
     5341 ttgcccatgc gcgtccgaat ggtaacgtga acaaagtcgg gatcagtttg ttgaagctca
     5401 atcagcatat caattttggt gaaaagagcc actatgccag cttagttttt gtatttagtg
     5461 cagtggatac gcattcacat ttggatattt tacagagttt ggcacagatt ttaggagatg
     5521 tagcaatagt aaaaaattta attcaaagtc aaaatgaaaa ggaaatctta tcaattatca
     5581 aaggggtaga gcaaagatga aaattttagt ggtatgtggt cacggattag gaagtagttt
     5641 tatggtagaa atgaatgtcc aagaagtgtt aaaacagttg acgctaaaag atgctgtcga
     5701 tgttgaacat agtgacatta tgagtgcaag tcctgaaatg gctgatttgt ttatttgtgg
     5761 acgtgactta gaagaaaatg cggcacgact cggggatgtg ctcattttag acaatatttt
     5821 agataaggca gagttagaag gaaaactaat agataaattc gagacgttag atgtcattta
     5881 aaaataagga gtgttgtcta tgcaaacgat acttgattta atagttgatg tactgagcca
     5941 gcctgcgata cttgttgctt taattgcatt catcggctta gttgtacaga aaaagccagt
     6001 gtcagtagtg acatccggaa caattaaaac gattctaggt tttttagtat taagtgctgg
     6061 cgccggtgtg gttgtgcaat cattagaacc attcggaaag attttccaac atgcattcgg
     6121 agtccaaggg gtcgttccaa acaatgaagc gattatttcg atagctttag aaaaatatgg
     6181 gacaactgca gcactcatta tggtatttgg catgttagtg aacattttaa ttgcgcgcgt
     6241 atcgaatttg aagtttattt tcttaactgg gcatcatacg ttttatatgg ccgcattttt
     6301 agccattatt ttaacggtag ggcatattaa aggtgtgtta acggttatat taggtgcatt
     6361 aattttagga ttgattatgg ctgtatttcc agcattagca caaccgacga tgcgtaaaat
     6421 cactggtaat gatcaagtcg cattaggcca ttttgggaca gtgagttatt gggcagcagg
     6481 tgaagtagga aaattattta aaggccattc taaatcgacg gaagagatta acttttccaa
     6541 aggtttgagc tttttacgag aaagtacgat tagtatttcg ttaacaatga ttttgctgta
     6601 tctcattgcg agtttatttg ctggtgtcgg ttatgtacac gatgaaatta gtaaagatca
     6661 aaactttatc gttttttcac tcattcaagg ggttacattc gcggcagggg tgtttatcat
     6721 tttaacgggc gtccgcttga ttttggccga aattgtacct gcatttaaag gtatttcaga
     6781 aaagttggtt ccgcattcga agccagcatt agattgtccg attgtattcc cttatgcgca
     6841 aaatgcagta ttgattgggt ttttcgttag ctttttaaca ggtgtacttg gtatgtttgt
     6901 gatgttttta attggtggtg tagtgatttt accgggtgtt gtcccacact tcttcttagg
     6961 tgcgacttca ggtgtgtttg gtaatgcacg cggtggcatt aaaggggctg ttgcagggtc
     7021 agcattaaat ggtctactga tcacgttttt acctttactc ttcttaccgt ttttaggaga
     7081 tttaggactc gcttcaacga ccttctcaga tactgacttt ttagttgttg gcattgtatt
     7141 tggtaatatc gtcaaatatt taggcattgt gggtctggtc ataggtatta tcattgtagc
     7201 tgccgtcgcg attgtattac aaaagcgcgg tcgtacagtt tcagaagcga caaagtctta
     7261 atgaatctgc atttaaaata aacttgcacc tttcttaaag agacgctata atagtgtcat
     7321 aagatttcac acatgtacta caccaaaccc cctcactctg gaccagtgag ggggttttta
     7381 tggtgtggct acaatcgcct atttttgtct ctgttgtctt ttttgtgtag ccaataggca
     7441 aataaagcaa cagtacagcc acttaaagta gtggctatat agtgaaaaaa gatttcacac
     7501 atatgtctac acctcccttc tatgccaaaa tgacacctaa aggataggcg ataccctatt
     7561 atataacatt ataaatgcaa aaataaagtt ataatataaa aatagtcgtt tattgttttt
     7621 ctgctgatga atggttctct gtttttttaa aagtcaatct cacatcgcct gatacttcaa
     7681 ttgttcgacg ttcattgacg tcacttttaa aaattttgtg ataagcgcct agaaacatat
     7741 gagagtaaat ttagttttca tcaatagagt tacaattttt ataaagaaag gttataataa
     7801 agatgtaaaa ttttacaata ggtttacacc tcacttcctc actgtaccag agtgagaggg
     7861 gtttttaatg gtgtggctac aatcgcctat ttttttaccg ttatttttat ttcatagcca
     7921 atggacaatc aaagcaatgg tacacctact gagaacagtg agtgtgtatt gctttaagat
     7981 ttcacacacg accccttcac tttttattca aagtgaaggg gtttttatta tcgcttattt
     8041 ctcatctgac tcgtttctca caatgcgata atacatagag atattcctca tatttaaaat
     8101 ccatccccag caaatctaac gacgatacac gtgatttaac taaaaacaat cgtacgatga
     8161 agttcctttt gacaccttct atctcacaac gctttgttca cataatgtta aaaaagaaat
     8221 gacaaatcgg ttaatgattc agatatcatt tgaaaatcac tatatatggt gtttatgatt
     8281 atttatagac actacatata gaaaagagtg atattttgac acaacttgaa aaacaattaa
     8341 caggtttaat gacaaaagat ccaacgattg taaatgaaaa tgctaataag gatagtgaga
     8401 ctttttcaac aatgcgcgat ttaacggcag gtgtcgtttc aaaatcatac gcgttacaac
     8461 atttattacc cccgcatgtt gcgatggcgc atcaaaaagg agaaattcac ttccatgatt
     8521 tagattacca tccattccaa ccgctaacga actgttgtct catcgatgcg aaaggaatga
     8581 tggcacatgg ttttcaaatt gggaacgcac aagtgacatc tccaaagtca attcaaactg
     8641 ccgcggccca acttgttcaa attattgcga atgtgtctag cagtcagtac ggtggttgca
     8701 cgattgatcg tgttgatgaa ttattgagtc attatgcaaa gtttaatgaa gagaaacatc
     8761 gtgaggttgc acgtgagttt gttaagagtg atcaaattga tgactatgta gataaacggg
     8821 taacccaaga tattgcagat gcggtcgaaa gtttagaata tgaaattaat acgctctata
     8881 cttcaaatgg tcagacgccg ttcgttacat tagggtttgg attaggcata gatgagctta
     8941 gtcgcaaagt acaaacagca attttaaaga cacggattaa aggactcggt aaagaccgca
     9001 ttacagcgat atttccaaaa ctcgtgtttt ccattaaaaa agggactaat tttgcaccag
     9061 aagacccgaa ttatgacatc aaacagttgg cgttacaatg tgcgatgaag cggatgtatc
     9121 cagatatttt gaattacgat aaaactgtag aacttttagg tgactttaaa gcgccaatgg
     9181 gatgtcgctc atttttacct gcatggcaaa atgcacaagg tgagtttgaa aataatgggc
     9241 gctgtaattt aggcgtggtc acgctaaaca ttccacgtat agcgattgag tcggctggtg
     9301 atatgacgcg tttttgggat ttgtttgatg agcggatgca agtcctacac gatgcgctcg
     9361 tttatcgtat cgagcgtgtg aaagaagctg taccgaacaa tgcaccaata ttatacaaac
     9421 gtggcgcttt caaacaccga attaatgaag aagatccggt cgatacattt ttcaaccaac
     9481 gacgcgcaac gatttcgatg ggctatattg gattatatga agcagcgact gtgttctttg
     9541 gtccaaattg ggagacgaat cctgaagcga aagattttac attaaatatt ttaaaacaaa
     9601 tgaaaaatta tcaacttgaa tggacagatc aatatgatgt atggtttagc atctatagta
     9661 cgcctagcga gtcgttgacg gaccgttttt gtcgcttgga tcgagaagca tttggtgaca
     9721 taccagatat tacagataaa ggttattacc aaaattcttt tcactacgat gtgcgtaaag
     9781 atgtcacacc ctttgaaaag ttagattttg agaaagacta cccttattta gcatcgggtg
     9841 gctatatcca ctactgtgaa taccctaaat tagatcataa tgtgaaagcg ctcgaaactg
     9901 tatgggatta tgcgtatgac cgagtgagtt atttagggac taacattccg attgaccatt
     9961 gctatgattg cggttttgaa ggtgattttg atacgactga gacaggttat cgttgtccgg
    10021 aatgtggcaa tcaaaatcca gaaacggtgg atgtggtgaa gcggacatgt ggttatcttg
    10081 gtaatcctgt gcaacgtccg acgattgaag gccgccataa agaaatgtgt gcacgagtca
    10141 aacatctgaa ggtacgtcaa tcatgagtgt attagatgta agcactggtg ccggttatat
    10201 tgcgaaaatc gaataccaaa gttttgtcga tggtgaaggt gtccgatgta gtgtttatgt
    10261 ctctggttgt ccatttcaat gtcaaggttg ctacaataaa gcagcccaac attttcgcta
    10321 tggtgaagca atgacgcata cggtgatgga agaagtgctt gatgcgtgtg cgccagaata
    10381 tatagctgga ttaagtattt taggaggcga acctttttgc aatttgaaag ttgttgcgcc
    10441 acttgttcaa gcttttcgtg cacgatacgg tcgtgaaaag tcattatgga tatggacggg
    10501 atatttattc gaatatttat ggcgtgctaa tgaccaacgg acagagatca taaaacaaac
    10561 tgatgtgatt gtagacggca tgttcatgca aaaattatat caacctaatt tgccctataa
    10621 agggtcatta aaccaacgtg tcattgatgt tcatcaattt attaaaacta agatgatgag
    10681 ccagtcgatt tacattgaat aaacagatgc gtgctgattc tcataaatat aatttttcga
    10741 atttttgcaa cttgcaagaa aattcggatt tgtatattga catcgttaag gatgttagat
    10801 agacttgttg taacattaaa agccagtaaa acacccgcac ggttattgca ttggccgttc
    10861 tattttcgcg atacatcttg cattttaaca attgaatcat acttatcaag attggtggag
    10921 ggacaggccc tttgaaacca ggcaacctat tcagttaggt gctaattcct gcaggtgatt
    10981 ttacctgaga gataagtctt ctagtaaaag tctatcttta tcaggtaggc ttttattttt
    11041 tatgattagg aggaatgtca aatgagaagt gattttaaat ttgaaacgtt gcaattgcac
    11101 tcaggacaag aagtcgacga aagtagccat tcacgtgctt taccaattta tcaaacgaca
    11161 tcttttactt ttgacgatac agcacatgcg gcgaatttat tcggtttaga tgaacttgga
    11221 aatatttaca cacgtctgat gaatcctaca acgaacgttc ttgaaacacg ggtaaccgaa
    11281 cttgaagggg gtgtcgctgg tgtagcggtt gcttcaggta tggcagcgat tacttatgcg
    11341 attcaagctg tcgcgcaaaa gggtgatcat atcgtagcaa gttctacatt atatggcggg
    11401 acacatacac tgttcacaca tacgttaccg aaatatggga ttgatgtcac attagtcgat
    11461 acgacagaag ttagtcatat agaaaatgcg cttcaagaca atacgaaggc cttatttgta
    11521 gaaacgattg gtaatccaga aggtaatgtt gaggattttg atgcacttgt aacaattaca
    11581 aaagcacaag gtattccact tattgttgat aatacattcg cgacgcctta tctttcacgt
    11641 ccgattgaac atggcgcgaa cattgttgtt cactctgcaa ccaaatttat tggtggacac
    11701 ggaacatcaa tgggcggggt cattgttgat gcaggtaatt ttaattggga taatggcaag
    11761 tttccaggat taagtgaacc cgatccatct tatcatggtt tagtattcag tgaaaagttt
    11821 ggtgaagccg cacttgcttt taaaattcga acaacaatat taagagatac aggagcagca
    11881 atctcaccat ttaatgcatt tttactaacg caaggattag agacgctttc attacggtta
    11941 gaacgtcatg tagaaaatgc tgaaaaagtt gcacaatatc ttgaaaagca tgacaaagtc
    12001 gcatgggtta aatatgctgg cttgccaacg agtgagtatt atgcgttaaa agagaagtat
    12061 ttaccaaaag gcgcaagttc catctttacc tttggtgtca aaggtggata cgaagctggc
    12121 aaaaaattta ttgaaggctt agaattattt tctttgttag cgaatgtagg agacgccaaa
    12181 tcgcttgtca tccaccccgc atcaacgaca catcaacaat tgacggaggc agaacaaaca
    12241 gcagcaggta ttgcccctga aacgattcgg ctttctatag gccttgagca tatcgatgat
    12301 attattgcgg atttggaaaa aggctttgct aaactttaat tttaaacgtt gcacaaaata
    12361 aagggaaatt catgatacgg tagattgaaa tgaatgcttt taaacaatga aacttcatat
    12421 ggaagatgca gttgttctac cgccatgatt ttacctttca ttaattaaaa agtatcccca
    12481 tgaatataca tcatcgtctt atcaagagag atggagggac tggcccaatg aaatctcggc
    12541 aacaggaatt gattcactgt gccaattcca gtagcacaat tgctagaaga taagtcaact
    12601 ttcactatgc cttatcttcc tatttttagg aggtaatgtt catgacacga aaacaaattc
    12661 attttaacgg attcgtccaa aactctcccg ctccccatgc tgcaggttta tggaaacacc
    12721 caaaagataa aggagcgaca caccacaatt taaaatattg gacgaatata gctcaaactt
    12781 tagaacgtgg tttatttgat ggtattttta ttgctgatgt attaggtact tatagtgttt
    12841 ataatcagtc ccatgacgcc gcagtgaaac acgcagttca actccccgca cacgacccta
    12901 tcccactcgt ttctgctatt gcagcagtaa cagagcatat tggtattgca cctactgttt
    12961 ctactactta tgcacaaccg tataaactag cccgtcaatt gtctacactc gatcatctga
    13021 caaatggtcg attaggttgg aatgttgtga cgtcttattt agaaagcgag gcagtgaact
    13081 taggcttaaa agaacgcttg cctaaagcgt tacgttacag ccgtgctgat gaattcttgc
    13141 aagtgagtta tcagctgtgg gaagacagtt gggaggacga tgcagttgtt aaaacgcgtg
    13201 agacagatac gtatgctgat ccttccaaag ttcatgcgat tcaccataaa ggtacatttt
    13261 tcgatatacc tggaccgcat cttgtagagc cttcccctca aagaacacct gttttatttc
    13321 aagctggtgc ctccgaaaaa ggtaaaacgt ttgctgcaaa gcatgcagag gctgtgttta
    13381 ctaaacatac ctctattgaa tcgttacgag catatgtcac agacattcgt acaagggcac
    13441 aacaatttgg ccgtaatggt gaagatatcc ttgtttttcc aatggttttg cctattatcg
    13501 gtgaaactga agaagaggct tatgaaaaat atgaagcact gcaaaatgaa gtcagttatg
    13561 aaggttcagt cgcattgtta agcggacata cgggtattga tttttctcag tatgatccag
    13621 atgaatatat cgaaaatata gaaacagaag cgatgcaagg caatcttaat ttgtatacaa
    13681 aagatccaca tcgaaaatgg acattgcgag aagcggtgaa aaatcacggg ttaggtaatg
    13741 gaacggttaa gttcattggc acaccaacac aaattgctga tcaattggaa ttgtgggcga
    13801 atgaaggcgg tgcagacggt tttaatattg cacaagccta ttctccaggt acgtttgaag
    13861 aatttgtgga cttcatcatc cctgaattac aaaaaagagg tatatatcgt acagaatatg
    13921 aaggtgaaac tttacgtgaa aacatgtttg gcaaaggcca tacgaaagtg aaaccgacac
    13981 atcccgcgcg aaataaaaaa gtcaatttag tacaaatata gggggatgat tatgaatgac
    14041 gttaaagtgt atacatggat aggctttatt gtttttatgg cgctcatgat tacggtaggt
    14101 tttgtcagtt ctagaaagat gaaaagtatt tcagattttg cgacgggctt tggaaggatt
    14161 ggaccacgta cgctaggctt gtcttttgca gcgacgtatt taagtgctgc aacctttcta
    14221 ggttatccag gatggtcgta tacgtggggc ctcaataatt tatggttatt tttagcgatg
    14281 tttatcggtg gacctacagg cgttttaatg gtcgctaaaa gagtcagatc attaaacaca
    14341 acacaacaat ccctctcact accagattgg ttgggcgatt tttatgacag ttctatttta
    14401 cgtgttggga cggctatgat cttattattt aatattttct atatcgcaag tcagcttgtc
    14461 gcaggcgctt tgatttttaa atatttactc ggtatgagtt acttttcaag tttaattgtt
    14521 atcacagtca ttgttgtgct ttatgtatac gtaggtggtg cacttgcaga tatttataca
    14581 gatgccttac aagttatcat gatggcagta gctggtctca ccatttttat ctctggcatt
    14641 gtgctatttt ggaaggggag catccatgat acgttttcgg gtattgtaca aaacttaaac
    14701 caccaaaatc attacttagt ccaagttttt aatcctgact ctgttcactt tcactctttt
    14761 acaatgatta tcggcgcgat tattattcaa tgggcttttg catcagcacc ccacttattt
    14821 aataaaattt taggtttaaa aagtgaaaaa gatttaggac gcatgattcg aacttatatt
    14881 tttgtaatgt caatctgttt acttgttctt tttggcggta ttttcagtcg tgtggcatta
    14941 ggtgggcaag ttgagagttc agatttagcc ctattacaat atattgagtg ggcattccct
    15001 gctggcattg ttgctttatt cggtgtcgtt atattggcag cagccatgtc aactacagat
    15061 ggtttgtttg tttcaatttc tacagtgttt gcgaatgatt tatttttaaa actgattgtc
    15121 aaacagaagt gggtgagtct tgaagaagag aaagccaatc gaattgcttt tcgcattagt
    15181 cgtgtttctg tgccggttgt aggactttta tcgtttttat tagttttgaa gccaccgctc
    15241 tatatgagtg acttcatgtg gattgggatt tcgggtattg cagccggtac aatgggtcct
    15301 attttgcatg cggtatatgc gaaacaaaaa gcacctggcc gtgcagcaga actatcgatg
    15361 gttgtaggct tagtttccta tctcgttatt tattttggtg gtgtcatccc aagtacaatg
    15421 tctgctggtg ctatcgcaac aatattaggt atattgacaa ttacagtgat gtcatctgtc
    15481 atgcaccatc gtgctagcca actttctgta gataaggggg aagtataatg tttgtaaatg
    15541 aaatgttatc catttggcta tatggttata tagggatatt tgttggacta cttctcgcat
    15601 taaaatgggg ttactcaaat catgacgaaa aggagaatga ttaatgccaa taattaaaat
    15661 tgatttgatt aaaggaaaaa gcaaagatta tattaaggag gttttggata tttcatatga
    15721 agtgatgcta gaagcctttc atgcaccagt aggggatcgc tatcaaattg tgacacaaca
    15781 cgaagcgtat gagatgcaaa tcttagatac aggtttaggc gtagaacgga cgacggatgt
    15841 gttagttttt acacttatca cgcgcccaag aacgcaagaa caaaaaacga ttttttatcg
    15901 caagctagta gaaatgttac atctaaaatt aggcattcga aaagaagacg tactcattac
    15961 tcttgtagaa aacacagatg agaattggag ctttttcaat ggggaggcgc aattcttgaa
    16021 tggagagtta taatatgaca agaaaaatat catctaaaat ctctctgctc tcttgagttg
    16081 tattgattgg gaaaagagtt cagtggtaag catataaatt catcaacact gcaaattata
    16141 tggttgagta agaaaaatta gtagtctaca actaagcaaa cgttaaatgc caacaaacgt
    16201 attcagacaa cacatagcga tgaactgtaa aatctgatga ttagaaaaga ttttacagtt
    16261 ctttttattg aatctcaggt gcttttcact ctaatcactg ccgtcatgag gtctgaaatc
    16321 atagtcgtta agcatcgtat taagtgcata gagaaaagtt cgttataata gtgaaaaaga
    16381 cgaaagatgt gttcaaaatg aaaaaaataa tgattgtgaa tacgagttat gatcaatttg
    16441 atggctttga tttaccaaca ggtttatggt taagcgaact tgtgcatttt tatgatgtat
    16501 tccaaaataa tccgaattat caattggata tatacaatat caacggaggc gaaacgccaa
    16561 tagatcctgt cagtatgaat aaagtgacgt tagatcgttt gaccaaaaaa tattatgaag
    16621 atgaaacttt tatgcgaaaa ttacacgatt caccatccat tgatgaagca gatgtgacac
    16681 agtatgatgt gatttatttt accggtggcc atggtgtgat gtatgacttc cgaggacatg
    16741 atacgattgc ccgtgcggta aacgacattt acgatcgtgg gggtctcgtt tcttcagttt
    16801 gtcatggtgc gagtgcttta cttgaaatta agcgcccaaa cgatcatttt cttatagaag
    16861 gtcagaagtt gacaggtttc tcaaatcgag aagaaagtat agcgcgacgt aaaaaacaag
    16921 taccatatca gttagaaacc gcattaaaag aaaaaggcgc actttaccaa aaaagcatca
    16981 taccattaaa aagctttgtc gttgaagagg aacaattaat tacaggacaa aacccagcgt
    17041 cagcacgtga tgtaggtgaa gcaattaaac tcagattaga tgtgaagtga aaacaaaaaa
    17101 attagaatag gacttaaaga taggacttaa agagttgagg tgaaataaaa gagccactca
    17161 aacggctttt tatttcactt ttttagtatc ttgtcgtaaa aatatgacca tcctaacctg
    17221 tgatgatttt aatgaaaaag atacacttta aacacaatac atcttgcaat ttctcatttt
    17281 tagaaaataa tgattttaaa aatgcatatt gcgcttatga aatgtttagc gtataatttt
    17341 aaatcgaaat cattactatt ttaggaggag accacatcat gaaaaaaagt ttcaaattat
    17401 tagcgactgt ggtattgtcg ggttctatgt tagcggcttg tggtcaaggt gacgataaag
    17461 catcatcaaa cgaccaatta aaagtaacaa cgacggtttt cccattacaa tcgtttgtta
    17521 aacaaattgg tggtgagcat gttgaagtag attctattta tccgaaaggg gcagacttgc
    17581 atagctttga gccgacacaa aaagatatta tcgatgcaag caagtctgat ttattcattt
    17641 atactggtga tgatctagac cctgtagcga aaaaagtagc aaatgcgatt aagaaagatg
    17701 atcataaatt atcattagaa agtagtttag ataaagccac tttattaaca gaccaacatg
    17761 aacatggtga gcacgaagaa catggtgaac atgaagaaca cggtgagcat gaagaacatg
    17821 gtgagcatga agaacatggt gagcatgaag aacacggtga acatgaagag catggggaag
    17881 agggacacaa gcacagtgaa gcgcatgatg aacatgagca ccaccatcat catgggggtt
    17941 atgatccaca cgtatggtta gatccacaat tagataaaaa attcgtatct gcaattcgtg
    18001 atgatttaag caaacgtgac cctaaacata aagcagaata tgataaaaat gcagacaaag
    18061 tattaaaaga tttagacagc attgataaag agttaaaaga tgtgacaaaa gatcatcaag
    18121 gtcatgcggt atttatttca catgaatcat taggttattt agctgatcgt tatggttttg
    18181 tacaaaaagg cgttcaaagt ttaaatgctg aagacccatc acaaaaagaa ttaactgaaa
    18241 ttgtgaaaga aattaatgaa acgggtgcga aatatattct ttacgaagaa aacgttgcaa
    18301 acaaggtgac agatacgatt cgtaaagaaa cagatgcgaa accattgaaa tttaataata
    18361 tggaagctgt atctaaagac caagcgaaag atgctactta tcaatcattg atgaaagaaa
    18421 atgtaaaaaa cattgaaaaa gcgctcaacg acaaaattaa agtagaagac gataaagcag
    18481 caaataaaca cagcaaagcg attcaagatg gctatttcaa agacgatcaa gtgaaagatc
    18541 gtgatttatc tgactatgct ggtgaatggc aatcagttta tccattatta aaagatggta
    18601 cgctcgatga agtttttgaa cataaagcag aagacaaagg tgacaaatct gcaaaagagt
    18661 acaaagctta ttatgataaa ggttacaaaa ctgatgtaga aaagattaag attacagata
    18721 atcaaattac ttttacaaag aatggtaagt ctatgacagg cacatatacg tatgatggta
    18781 aagacatttt gcaatatgag ggtggcaacc gtggtgtgcg ttatactttc aaacttgaag
    18841 gtgacgcgtc agaaggatta ccaaaatatg tacaatttag cgatcataac attgcgccta
    18901 cgaaaacagg acatttccat atctttacag gaaatgaccg tgagaaagta ttgaaagagt
    18961 tagagaattg gccaacatat tatccagcta atcttacaaa agaacaagtt aaagatgaaa
    19021 tgttagagca ttaatatgat ttaataaaag aaccggacga gacgtgtatc tcttctggtt
    19081 cttttgatgt ttgaggtggt tgggttgctt ctacattgag caacaagaaa gactgattgt
    19141 ttaacgtagg ccgcttcttc tctatcgttt aattttatgc tttttttggc tcgaatagct
    19201 ctgttggatt gactacatat taacaaaccg ctatccattt tttcattatg aaaatatcat
    19261 cctgcttttt ctgtatgtaa ctgtatcaaa ttttaaaatt gataggatga aatacaagat
    19321 aatttgaata tagcaataat cttttaaaac ggatgtcata cactgaaaat gagatggcag
    19381 agcgcgttaa tgcgtgtgag tatattttga attgtagcca atttgtaaaa taaaaatatg
    19441 gataacgtca tcatttcaac attaagcaaa atgagcgcta tccataattg agttttaggg
    19501 atgagttaaa aactgagcca taccacttag actttattga ctgatgcgtc gtaaatggca
    19561 tcaatcgttt ggcctaataa gcgatcaaat tcttcgtcag attggctcac acgtaagtca
    19621 ttaattaatg cacgtgagaa acttgcgatc aagccgtgat ttgtttttaa gaactcattc
    19681 gctttttcaa ggctgtaacc ccctgataat gctaccacac gaactacatt tggatggttg
    19741 attaatgatt gatattgatt tttttgagtt ggaatggtaa tctttaacat cacataatct
    19801 tcagaaccaa gtttgtctaa ttgtttttga atagattcag ctaaataagc ttcaatttcg
    19861 gctttttgtt ctgcatcaat attcacttca ggctcgatga ttggcacgag accttttgaa
    19921 atgatttggc gtgcaatccc aaattgttgt tcaacaacag cgtcgatacc ttctttattg
    19981 aattctaaaa tgttagaacg catttttgta ccgaagattt tgtgttcatt cgcacgatct
    20041 aataagctgt ctaattcagg aataggcttc atgagttgaa cgccattttc tttatcttca
    20101 agccctttat ctacttttaa gaaaggcaca atacctttgt cagctaaata ttcaccagtg
    20161 tgcttacctt ctacttcacg atccatcgtt tgttcgaata aaatcgcacc aagcacttta
    20221 tctgcagtaa atgacggaga agtcacaata cgcgtacgca tgtcatgaac gaggttgaac
    20281 atttcgtcat cattagtgta ttgatcttct gaaacaccgt agccacgtaa cgctttaggt
    20341 gtactaccac cactttggtc aagggctgcg ataaaaccat ttccattttt aattttatca
    20401 aattgttctt gattcatact gactttcctc cttgaaacat ttttctacat ctagtatgac
    20461 gaattatgat aacagattca aatgaaatga gaaatctaaa aattgaaaaa agtagcgata
    20521 aaacgctgtc atagcaggca ccagaggatt ttgtctataa agtgaacatt ttgaagaaag
    20581 gtaaatgtga ggaaataaaa aaacactgca ccacgcattg ttggaatatg catggtacag
    20641 cagcggatac atggctgacg tctaaaattg cgcatttcat ttaattcaag acaagtcatc
    20701 tgacattgat gatggaataa attttgaata ctttcactgc atcgattttg gtggaaactc
    20761 atctttctta tgatttattt gctaaggcgt catatgatat cgtgtcaaat acttaatgtt
    20821 tgtttattca gggaaatatg gaataaacaa tggttcaacg gttggacaga ttactgagaa
    20881 accgtcaaaa ctttggaatg atgcacgcgc agctacaacg ttaaagctca tcacttttcc
    20941 aacgatatga tggtgctctg aaacgaaata ggcgctaaac ccaggcggat gaataccact
    21001 cagctcatgg ggtgtaaata gaactaaaat agtgcctttg atttcacgaa ttgtacgttc
    21061 aacttcggat aaagtaatcg gttgtatgtg ttgagatgat ggttcgatga ctgggtgttt
    21121 ttcataaatg ctgagatgta aatcactcaa gtcaccgtgt attcttgtta tggaaaacaa
    21181 ctgattgctt tcgaactttt gtttgattct ttcaaaaaca taggtatgat gcatgtcagt
    21241 gatgtcaaaa gtcaattgag cacggtcacg gtaaatggcg ccatacggta ctttctctct
    21301 accattaagt ccgtgatgct catcaaactg attcatatga acgggctgac catcaataat
    21361 cacaaaatcg ccatctgcat gattcaatgt gccgaagcca taatcaccgt aacgtaacag
    21421 ttcagcaatc gtgacttcac tctctaggtg accttctaat aatgatttca tcgtgccaac
    21481 ttgatgaata tagtgacgat attctttcat tggatcagcc tcctttttat ttctcaatac
    21541 aatctgaaat atcgcagact tcctatttta atactgtgcc tcattggcca aagatagcaa
    21601 agcgcttcgt cgacgaataa gattttaaaa tatattttgt tgcttgctat gtaaagagta
    21661 taaacgccgg cagtaaaaaa atcaacataa ttttctgaaa aaaatgacat aaattttctg
    21721 gcaatggcat aatgcgctga ttatcaggat tttcatgtca aaatttgaac taaaaaatat
    21781 atacatttct gtagttgtgt gaaccatttt catgcgtcga gtgtacaaaa tctaacgcaa
    21841 tatgttttaa ccgcttcata tgaatttcaa cagtgagatt ttaaagagag taaaaaataa
    21901 taaagtataa aaaggtaagt atgttgacct attggggtaa aaaaagagga acgccttggc
    21961 caacatactt acctcatcca agatggttaa aatgtcgttg attatttcac gtgtttcatt
    22021 tctaattcat gaatcaagtg cgtcagcatt tcgttattcg gtgtagcaat accgagctca
    22081 cgaccgtact ttgcgatttg accgttcaag tagtcgattt ctgtatagcg cccgttgtac
    22141 aaatcttgat gcatcgaagg atagtgtaaa ccttgtgctt catttggata cgccgcttca
    22201 attttatcaa gcaatgctgc tgcacttaat gagacacctc gcgcttctgc aactgcgaca
    22261 atttctccaa tgagaggttc gacaatgtca cgtgcttttt catattgact gaattcatta
    22321 atggttttgt ctaaaatcgt acagagcggg tttaaaacac tgtttaatgt cgctttactc
    22381 caaattgact taaatacatt gtcactaatt ttagcgttta attttgcatc attaaacact
    22441 tgattaatac gttctgtacg ttcatccgct tgaccatcag cacgttggaa ttcaatagaa
    22501 ccttgtcctt ctaataacaa ttgacctggt ccacgcaaac cagctgtcca cattgttact
    22561 gctaagaaaa tttgtgtttt tggaacgata gcagagagac gatcgccatg acctaaacca
    22621 ttcatcatag acaatagagc ggtatcttca ttgattgctt tgttgtcgta tagtgtacgt
    22681 aacatttgtt tagcttgcat tgatttcgtc aaaataatca ctaaatcaaa tgtttcgttt
    22741 acttggtgtg gcaaaacagc aggaatctct agcgtgtaag tatcggtttc tgtttggatt
    22801 tcaagtcctt tttcattgat tgtattcaca tgttcttccc acatatcaat caatttcaca
    22861 tcatagccgg cttctttaat ttggctcccg atacgtccac ccatagcccc tgcaccagca
    22921 atagcaattt ttttcataaa acaatgcctc cttatataaa attagttaca acttaagttt
    22981 agatttcact ttttgtatcc gtcaataaaa agttacagag actttcgaaa attagtatta
    23041 tatgtgatga aatattgaaa tttgctacaa gaaagcccaa tgtgtagatt aacgcattca
    23101 gttcaatgcc tttgttcagt atttcggata aaacgataat ttttaggata ttaagcgctt
    23161 tcatcaggtg ctatagtgaa gtcaaatgaa gacagaggtg aaccacatga actttttcga
    23221 cattcaaaag atccctaaca aagggatttc gctttcaatg caacgtaaac tttggctacg
    23281 ttatttcttg caagctttct tcgttgtgtt tttcgcttac atggcgatgt acttgattcg
    23341 taataacttt aaggcggcgc aacctttact taaagaagag attggattga cgacgttaca
    23401 actcgggtat atcggtttag catttagtat tacatatgga ttagggaaga cattactcgg
    23461 ctattttgta gatggtcgta atacgaaaaa aatcatttcc tttttacttg ttttatctgc
    23521 aacagtcgtt ttaattatgg gatttgtatt aagttacttc ggttctgtaa tgggcttatt
    23581 aattgtttta tggggattaa atgggatatt ccaatcggtc ggtgggcagc aagttactca
    23641 acgatatcac gctgggcacc acgtacaaag cgcggtcgtt atttaggttt ctggaataca
    23701 tcacataata ttggtggtgc cattgcaggg ggtcttgcgt tatggggagc gaacgttttc
    23761 ttccatggta gtgtcattgg aatgtttgtg ttcccatcag tcatcgcgtt gataattggg
    23821 atagcgacac tctttatcgg taaggatgat cctgaagaac tcggttggaa tcgtgcagaa
    23881 gagatttggg aagagcctgt cgaacaagaa aatattgatg cacaagacat gacgaaatgg
    23941 caaattttca cgaaatatat tttaaagaat cctgtgattt ggattttgtg tgtatctaac
    24001 gtatttgttt atatcgtaag aattggtatc gacaactggg cgccattgta tgtgtcggaa
    24061 taccttcatt ttgataaggc agatgcggta aatacgatat tttactttga aattggcgca
    24121 ttagtcgcaa gtttattatg gggttatgtg tcggatttac tcaaaggacg tcgtgccgtt
    24181 gtagcaatcg gatgtatgtt tttaattaca tttgttgtgc atttctacac tcatgcaaca
    24241 agtgtgacaa tggttaacgt ttcattattc gctttaggtg cacttatttt cggaccgcaa
    24301 ttattaattg gtgttgcatt aacaggcttt gtacctaaaa atgcgattag tgtagcgaat
    24361 gggatgaccg gctcatttgc gtatttattt ggtgattcaa tggcgaaagt tggacttgca
    24421 gcgattgcag atcctcagcg caacggatta acagtatttg gttatacatt aagtggttgg
    24481 acagatgtct ttatcgtctt ttatgccgca ctctttatag gtattattct actcggtttt
    24541 gttgcttatt ttgaagaaaa gaaaattaga agtttaaata tttaatgtac aattgggagg
    24601 cttagacgtt caatcgtcta agccccttag tttttttgat taatagatgt gcttttacat
    24661 aactttacat gtttaatctg acagaagtta gcctgcattc gagtcacgac gaatcactta
    24721 taaaaagttt tgtgcaagta gatgtcatca gtgaatgaag tggtgaacca tactcggtgt
    24781 tcatacctta ttttgaattc acgtattctc gtggtgacat tttcaaatac tttttaaaat
    24841 gataactgaa acttttgtaa tcagaaaaac cgactttatg ggcaatttca taatgtttat
    24901 ccccactttg caacaatgac atcgcttgat aaatccgata acgatttaaa taatctaaca
    24961 tcgtaattcc gacatgggtt ttaaaaatcc gcatcaaata agattcactc acgccgagct
    25021 ctgtggttaa tgcattactt tgccattttt gatcataatg atgatggata tgttgaacaa
    25081 cgtaattgac gtaatagtca ggatactcta atttcattaa cgattgaaat ataggtaatg
    25141 ttgtcgtcat tgttgttttt tgctcgtgtg caagtggaac aaattgcgcc aaacgttgat
    25201 ttaactgctc tgaatcaatc ggtttcaata aataatctaa cacgtgatga tgaatccctg
    25261 cttgcatata ttcaaaatca tcataactcg ataaaattat cttctgacac ggcaagtctt
    25321 taatcgcttc taacagttcg accccatcca tacgcggcat acgaatgtct gtaatcacaa
    25381 ggtcgggttg atgttctcga atcagtgaca acccttcgat gccgtcttta gcgagccaaa
    25441 cttcatgaaa atgatagtct tcccacgaga ttgcctgctt cagtccttca cgaataatac
    25501 gttcatcatc acaaatgacc actttataca tcagtttgct cctctcttgg tagttgaaat
    25561 gcgattaatg tcccttgttg ataagctgaa aaaattctca atcttgcacg tacaccatat
    25621 tgaatttgta ctttatggtt aaggtgattc aaacctaaat gtgacgtatc aaatacattt
    25681 tcttgcaaca tttgtctcac ttgcgcacgt ctgtccactg tcatacccat cccattatca
    25741 tggacgaaaa tacgtaaata tttggcagtt tgcttaatac gtatcgtgat gattaaaggt
    25801 tcggattcac gaccgtgctt aattgcattt tcaattaaag ggtgaatcat cattttacga
    25861 atcagctcat tttcaagacg atggcccata tctatattta acgtaatact gtcatcgaag
    25921 cggatgtttt gaatggtgac atatttttga atataagcaa gctcctcttt taatggcact
    25981 ttgtccgtct tgacgcgcaa tgtataacgc aacatttgtg acaactgttg tacaactttt
    26041 tgtgcttgat gcggtgacag tgtaattaaa taatgtatcg tttgcatcgt attaaagagg
    26101 aaatggggtt ggaattgacg ctcgatttcc tttaattgta ttttccgtaa ttgctgttct
    26161 gtctgttcaa ttgagtgaat gagtgtttcg tttgattcga ctaattcata aatataagtg
    26221 ttgatatctt caagttcact cggttggcct aaaggttgat atgccccgag ttcacgacgt
    26281 tgtgcttggt tgatacgatc aatcattaat tcgatatcac gtgtttggcg tttggccatg
    26341 cgatgtgcat tcataaaacc aaaaatcatt aacagcacga aagcaataca aataatggct
    26401 aacaaccgca gaccatcttc taatgcatcg tggatatctt taaattgaat catttgttca
    26461 cctttatcgt tcaggcgaat acgttctgat ataaagccga atggtggggg tggaaaagca
    26521 tcatcgacgt gaaaatgttc cgagttggaa tacaaaatat tatcaaagcg atccaaaatc
    26581 aaagttgtat gaccatagcg gtcttgaatt tcttctatat gtggcgtttg agcaaggtag
    26641 aaagacagtg cgacactttc gtgcaacagt tgaatacgtt gttgatgcat taagtacaac
    26701 tgatggacat ctttcttttc ataattgttc gtaatagatg tcttaccatt atcgaccacg
    26761 taatagaccg tacctggctg ttgatgcaca agttcaagta atagacgttt gaaagtggtc
    26821 acatcagact ttttggataa atcgagttgt ttcaatgtcg atttttcggt ttgaagggtc
    26881 gtttttattt gattttcagt atgcgctaaa tcatgttcag cttcgtgcaa atgttggtga
    26941 atgtgtcgat gttccaccca aatatataaa gtgtaaaaac tgacgagtcc aagtaaaatc
    27001 acaaggaaaa caggcaaaat cgtcgaaata aacagcgaac gacgcaattg ataacgataa
    27061 ggttgatacg ttttcattct acacgctcca aaaatttttg atgagtttca tgtggcaatg
    27121 cagtttcagg gatgactgga atatctcgta attgagcaat tccgggttct ttgatttctg
    27181 agacatcacg acgtatcggt tttaccccat tttcctgggc taaccgttgt tgtacagtgt
    27241 agcttgttaa gtaatgtatg agtgcagttc ttttagggtg cgggtgttga ctgttcacta
    27301 acgcaatacc gtctatattg agcactgtac cttcatccgg atagatgact tttaacggat
    27361 agcctttttg aagccaggtg cgcgcatctt gttcgtaact gagtccagca taataccgtc
    27421 cttgagctac ttgggcaatg acatcagaag acttagaaag cgccactgct tgttggcgga
    27481 attgatgaat tgcgtcagta ttgtgatgaa tatggtataa cccgcgcata tgttgatagc
    27541 ctgtcgttgt cgttttaggg ttcgaatagg cgactttttg tttgagtgcc ggttgcataa
    27601 ggtccgaata gccattgatg tgaatatcac cttgtaagtc tgtattcaca acaattactg
    27661 tcggcattaa tataaacggt gtgacgatag gttggttcga taatgaaata cgaaacttcg
    27721 atagatctag tgctttataa ggcacaaaat cttcgggatg ctcgatagtt tcacttaata
    27781 ccccacctac aaaaatatct ccgcgtccat gtttcggcgt ctgatgaatt tttgataata
    27841 aaacttgtgt cgaatcttca atgactgtta cctttacatt ttcttgatgt tcaaagtctt
    27901 tgagtatagg ttgaatcaaa tgtttcggat agggggaata aatggttaat gtatcgttcg
    27961 cattcgatgt atcttgttga caaccacaaa gaagtataat gagtagacac cataaccatt
    28021 ttttcattcg tataatcctt tcctatctca agtattgtat ttatcttacc aatatttatt
    28081 taatttgtag agaaaaaaat taatattatg actttcttat gattttggat gattgaaatt
    28141 tagattggtg gagttattta acagtcacag gggcatgtaa atataaaagc ggtgtgatac
    28201 gcatgagtag gcctcaaatt ttaagtttat tttaaagata tgcggaacaa gaagtaagaa
    28261 atttttaatg ttcatttaaa ggacgttagg cttattaaaa aagaaatgat aaactaatga
    28321 caatatagac tttataaaga gaagtattaa gttgactaga gtttgatgag tgttaaataa
    28381 atagaaaagt aaggtgaaac tcacaatgaa gaaaataacg aaagctgtga ttcccgcagc
    28441 aggtttaggt acacgttttt tacctgcgac gaaagctatg ccgaaagaga tgttgccgat
    28501 tttagataag ccgacgattc aatatattgt ggaagaagcg gtacgtgcgg gcattgaaga
    28561 tattattatc gttactggta aacataaacg tgcgattgaa gatcattttg acaatcaaat
    28621 cgagctcgaa atgaacttgg ctgaaaaagg caaggatgat ttgttagaaa aggttcaaca
    28681 tgcgacacaa ttggcgaata tgttttacgt ccgtcaaaaa gagcaaaaag ggttagggca
    28741 tgcgatttgg acggcgaaac aatttattgg tgacgagcct ttcgcggtat tgctaggtga
    28801 tgatattgtc gaatcagaga cgccagcgat tcaacagctg atggaagaat atgagcgcac
    28861 aggtaaatcc gtcatcggtg tgcaagaagt gcctgaacgt gaaacgcatc gttacgggat
    28921 tgttgacccg aaaaatcaac aagaacgttt gtatgaagtg acgcaatttg ttgaaaagcc
    28981 agtctttggt acagcaccat ctaatttggc cattatgggt cgctatgtat tgacaccgga
    29041 tattttcgat tatttggaaa atcaagaaga gggagctggc ggtgaaattc aattaaccga
    29101 tgcgattgag cgtttaaatc agtcgcaaca agtatttgcc taccgtttcg aaggtgagcg
    29161 atttgatgtg ggtgaaaaag tcggtttcgt caaaacaacg attcaatttg ctttacgtga
    29221 tgcagaaatg gctgacgaaa ttcgtgcatt tttaaaagaa gtacaatgat aacaagttga
    29281 acacatattg taataatgca aaaattattt aaagtgacta tcgagttctt ttcatatgag
    29341 acaataatat gatgcaattg ttctatttta gacatgaatt tgcagtttta catattaaag
    29401 tgataacgta actgtgttag aatgttcaca tgaaaattta gaaaagagga agaaaaagat
    29461 gcttcttttt acgatagaaa ttttaataat gattctcgcg attgtattgg gcctccgtac
    29521 tgctggggca ctcggttgcg ggatttttgc acttgtagcc caaattgtaa tgattttcgg
    29581 ttttggttta ccaccgggct cagcaccagt cactgcagta ttgatcattt tatctatcgg
    29641 tattgctggt ggaacgttac aagcgacagg tgggattgat tacttagtgc acctcgcttc
    29701 caaaatgata gaacgttttc cgaaatctat tatttttatt gcaccaatga ttgtatttgt
    29761 gtttgttttc ggtatcggta caacgaatat tgcattatca ctagaaccga ttattgcgaa
    29821 aacagcatta aaggcgcgta ttcaacctaa aaaagcattg accgcttctg tattgacggc
    29881 caacattgca ttgctttgta gtccagcagc ttcagcaaca gcctatatga tttcagaatt
    29941 tgctggctta ggtatttcaa tggggcaata cctttctatc gtacttccga ctgcattatt
    30001 gagcatgtta gtactcagtt gttttaacac atttgtcggc cgtactaaga ttgatgaaca
    30061 acatgcacaa acgatgcttc aaaaaatggc tgtggaccaa gaagaaacga cgaaacagta
    30121 tgatacacgt gtgaagttgg gtgtatttgc gtttatcgtc gcagttggct ttattttgct
    30181 cttcggtatt ttccccgaag ttggaccgaa attccaagta gatggtaaag tcgtcgaact
    30241 tcaaatgacg gatttagtgc aattgtttat gtatatgagt gcgatgatta atctactact
    30301 cgtcaaagtc caaccgaacc aaatattgac cacgcatatt acacaggccg cgattggtgc
    30361 aatttttgcg gtattagggc ctggttggtt aggggcaacg atattcagtg caccctcgaa
    30421 ccgtgccatg atggaagacg ggattggtgg acttattgct caagcaccgt ggctcattat
    30481 tatcttagtc ggtttagtag caatgattgt catttctcaa tctgcaactg cttcgattat
    30541 ggtaccgatt gtgttgagtt taggcattcc gccgatgttt ttcattgcga ttgtgcaaac
    30601 gttaaatgtc aactttgtga ttccagcaca gccaacgatt ttatttgcgg tagacgtaga
    30661 tgaaacgcgt tcaacaaaag taacgagctt cttaattcct ggctttttct taattacaac
    30721 aactgtagtg ataggattga cgattaagac gattttaggc atgtaatgaa aagtgaaaga
    30781 tttggattgt taaaccgtgc tgcacattct gaggtgtgga agttttaacg taagaagaca
    30841 atgaatcaat agacatatca aaaacacccc caaagctatc aaatgcggat agcttgaggg
    30901 tgtttttgat attaatgtac gttacattgg atgggcatag cgtttactgt acagactact
    30961 caatattccg aagactaaaa tcgcggcagc aaagatcagt gcatcattgt agctatgcgt
    31021 acgttcgatt aatatacctg aaatgtaagg agcaatcatt tgtccgacac tgtaaatcaa
    31081 tgtcatcact gcgactaagt tgttgccttt cgtttcaaac gtaatctggt gcgacttcga
    31141 catgaaaagg gtcgttagcc ctaaaaacgt cgcaccgaaa atcatcgaac tgagcgcaat
    31201 cgcaaaggca ttgactgtaa agataggcat cagtaccgca acaatttgta ataaaaaggc
    31261 gagtatgact gaaagacaaa taccaatccg ctgaccaatc attgaccata agacagtagc
    31321 tggaatggcg ccaagtccga caaacatcca actgagtgcc gcatattccg ataacgtggg
    31381 catcgtttta acaattgcaa cgagaaaagt ccctgtaatg atataaccgg caccttcaca
    31441 aaaataggca atcgcaaaag gaatataaaa ctttttagaa taacgtatca ctttctcagg
    31501 accatgtgcc tcatgagatg caggttcggg caatgttggg ttttcacgta aacacacgat
    31561 aatgatgagc gttaaaatga aagcggcact gcctaaccaa atccacgttt cgcgccaatg
    31621 ggtcacatct gtatatagaa aaataaataa actgctcgaa aataaaccga ggccgactgc
    31681 gctatataac agaccagcaa ttccttcacg gcgcgctaaa tgtaaagctt ccaatacaat
    31741 attagatgcg agtacaaata cagccccact agaaatcccg ttcaataaac gaaggagcga
    31801 ccaaatgaca aagtgatctg tcaccccaaa caataacatc gttgcgacat ttaataaaag
    31861 ataacacttc aaatcgaaaa ctttattttt cattatgtaa aaaataggta acatagcacc
    31921 aattaaataa cctaaatagt taaatgttgc taacaggccg acacttttgt tatccagtcc
    31981 agtatccaac tgcataaaag gtaagatcgg tgtataagca aaccggccta acgcaataac
    32041 gataaacagt gctatcatcc ctaatgctaa ttgacgataa ccatgtattc tgaggtcttg
    32101 tatttctctc aaatggattc ctcctaaatg gtaaagatgt tcctattata cgcgaaattt
    32161 aaggtta
//
LOCUS       DANHPA010000013        31647 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.013, whole genome shotgun sequence.
ACCESSION   DANHPA010000013 DANHPA010000000
VERSION     DANHPA010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 31647)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31647)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31647
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.013"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(667..813)
                     /locus_tag="PTC28_000503"
     CDS             complement(667..813)
                     /locus_tag="PTC28_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715821.1"
                     /translation="MAKKNDKLQNVVQMLSSIGVKVKKTKPRLDIMRSLPKPNPATEK
                     LKPY"
     gene            complement(899..3079)
                     /locus_tag="PTC28_000504"
     CDS             complement(899..3079)
                     /locus_tag="PTC28_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HDK5715822.1"
                     /translation="MTQEETFKITGMTCAACSARIERVLQREAGIDQINVNLVMENGT
                     VKYDPSQISIEEIYERVAKIGYEAFPMETKDETAKRKSDELKRQKGKFIISLILALPL
                     LYTMFGHFSFLGFIPVPELLMNGWFQFILATPIQFVLGWQFYVGAYKSLKSKSANMDV
                     LVAMGTSAAYFYSLYLMLTHLGHSGHVPLYFETSAVLITLILLGKYFEMRAKGHASDA
                     ISKLAALQVKDAEVERDGKIEMIAIDDVRVGDIVWVRSGQQIPLDGQVIEGSTTVNEA
                     MLTGESMPVEKNIGDTVIGSTINQTNFIKLQVTHVGEDLVLNQIIKVVEEAQNDKPQI
                     QRLADKISNIFVPTVVVLALLSFIVWFFVVTPFQFTAAFEIFIAVIVIACPCALGLAT
                     PTSIMVGSGRAAESGILFKTAEALEQAQHVDTIVFDKTGTITNGEPKVVHVYHETEEP
                     TIGAYVKSLEMQSEHPLSKALVDYYSDEAVHTVSQYETHAGSGISGVIDDNRVRIGSI
                     RFVTNNDLTQEQQDRIHSVAEQGATVVGMTINETLVAIIGVRDEPKAEAKAVIETLNK
                     NYDLVMLSGDSKQTAQAIGRELGFTRVIAEVKPDEKSKVVTELQNEGKRVMMVGDGIN
                     DAPALMKSDIGVAMGSGSDIALESADIALVRNHLDGIADALQLSRLTIKNIKQNLFFA
                     FCYNLIGIPIAAAGFLAPWVAGTAMAFSSVSVVLNALRLKNVKK"
     gene            complement(3180..3386)
                     /locus_tag="PTC28_000505"
     CDS             complement(3180..3386)
                     /locus_tag="PTC28_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HDK5715823.1"
                     /translation="MAKHMIEVEGMTCAHCKAAVEGAVKENAHVTHVEAFPADNRVEV
                     EVTDDSALADVKQRIYDQGYDVIS"
     gene            complement(3390..3611)
                     /locus_tag="PTC28_000506"
     CDS             complement(3390..3611)
                     /locus_tag="PTC28_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HDK5715824.1"
                     /translation="MENGYVKVTQLTTEAQQQQLSDRLLRLIGVESVAIDVATQSLTL
                     TYDTPANLNTIEKEIYDAGFPVIQSHKGV"
     gene            complement(3624..3911)
                     /gene="csoR"
                     /locus_tag="PTC28_000507"
     CDS             complement(3624..3911)
                     /gene="csoR"
                     /locus_tag="PTC28_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-sensing transcriptional repressor CsoR"
                     /protein_id="HDK5715825.1"
                     /translation="MTEQAHHSEEIKRNLKSRLNRIEGQVKAINRMIDEDVYCDDVLT
                     QIRATRSALNSVASRLLDHHMKGCIKHKIDAGHQDEAMEELLVTFQKLMKD"
     gene            4043..5533
                     /gene="cls"
                     /locus_tag="PTC28_000508"
     CDS             4043..5533
                     /gene="cls"
                     /locus_tag="PTC28_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HDK5715826.1"
                     /translation="MPEFFYAIFYNHNVLFNYILVGAFLLNLIFIFTIIFMERRSASS
                     IWAWIFVLGLFPLVGFVLYLLFGRQIQRKSIFKLEKQDRIGLDSIVNDQLTAIKNGEF
                     EVDNPHIQNYSRMIQMLLYNNAAFYTNNNEIKLLTDGNEKFDCLKEDIRNAERYVHIQ
                     YYIFRHDTLGKSILKLLEEKLEQGVEVKMLYDDMGSRALTLRDFKRFKEKGGHVESFF
                     PSKLPLINLRMNNRNHRKIVIIDGQIGYVGGFNVGNEYLGLSKKFGYWRDTHLRIQGN
                     AVSALQLRFILDWNSQSHRDNITYSSQYFPKPQQTHNGNIGVQIASSGPDEFWEQVKY
                     GYLKMISMAKNDIYIQTPYFVPDEAFMDALKIAALGGVNVNIMIPSKPDHPFVYWATF
                     KNVASLLEAGARVYLYDNGFLHAKTLTIDDEITSVGTTNMDNRSFTLNFEVNAFVYNE
                     KLAREVRESFEEDLKVCSELTKERYAQRSLWIKFKESVSQLLSPIL"
     gene            5554..6210
                     /locus_tag="PTC28_000509"
     CDS             5554..6210
                     /locus_tag="PTC28_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HDK5715827.1"
                     /translation="MKQQHIQAAEQYMRKTHQHDSSGHDIAHVLRVRKRALEIAQHYP
                     SADPYHIEMASLLHDTVDDKLVDVKSSRQALFAFFKEQGVSVMDQEAIIYIIDHMSFR
                     KTKKVGTLKTIEAQIVQDADRLDAIGAIGIARTFQFAGHFNEPMWTGTHRLTEMYQLS
                     DIDAVPPSAIKHFFEKLLKLKDLMNTPVAKDMAQQRHDFMESFLQQFFAEWDTEIKRS
                     "
     gene            complement(6264..7130)
                     /gene="yidC"
                     /locus_tag="PTC28_000510"
     CDS             complement(6264..7130)
                     /gene="yidC"
                     /locus_tag="PTC28_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HDK5715828.1"
                     /translation="MKNKALMTMLAGVVLLLAGCDYSKPSNRDGFFFNTFVQPMDRLI
                     HWLGDHLNNNYGLAIIIIVLVVRIVLLPFMLSNYKNMHMMREKMKIAKPEITEAQEKV
                     KRARTQEDKMAANQEMMQVYKKYNMNPMASMLGCLPLILQMPIIMGLFFVLKYPSGGG
                     ITKYSDFLWFHLDKPDIWITIIAGVLYFIQAYVSSFNMPQEQRQMGYMMMIISPIMIV
                     WISFSSAAALGLYWSVSAAFLVVQTYIANVVYGKKAKEEVAPLIKKFEAEKNGNKTGK
                     NTQVVSKKNKKK"
     gene            complement(7219..7857)
                     /locus_tag="PTC28_000511"
     CDS             complement(7219..7857)
                     /locus_tag="PTC28_000511"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDK5715829.1"
                     /translation="MTFNRKQLRVYFIAGTQDVKQGSLDGILKEALEAGITMYQFREK
                     GSSSLQGEEKTAMAVRLRDLCRHYQVPFIVNDDVDLAIEIDADGIHVGQEDAKVQSFQ
                     HLLEDKIIGLSVGSFEEYDQSDLTNVDYIGVGPVYETSSKLDASKPGGIRLIRRMREY
                     DENIPMVAIGGITEENVAPLLKNGADGIATISSITHSTDIEKSVKRYLQYFK"
     gene            complement(7847..8650)
                     /gene="thiM"
                     /locus_tag="PTC28_000512"
     CDS             complement(7847..8650)
                     /gene="thiM"
                     /locus_tag="PTC28_000512"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HDK5715830.1"
                     /translation="MNYLAAVRKQQPLVVCYTNDVVKNFTANGLLSMGASPAMSEAPE
                     EAVDFFKVTQGLLINIGTLTTRNSEDMLTIAKSANQMGVPIVFDPVAVGASQFRKDFC
                     QRFLEEIDVAVIKGNASEILTLVDTATTMKGTDSASDIDVVSIAQQAYEKYQTAIVLS
                     GKEDVIVHDGKVVILSNGSPLLTKITGAGCLLGAVVASFLLGETKPSIDQLIEAVSYY
                     NISAEQAELREGADLPGTFLVAFIDALNQTLAESYLLEIKKREVSENDI"
     gene            complement(8652..9458)
                     /gene="thiD"
                     /locus_tag="PTC28_000513"
     CDS             complement(8652..9458)
                     /gene="thiD"
                     /locus_tag="PTC28_000513"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016426465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HDK5715831.1"
                     /translation="MKKPKIALTIAGTDPSGGAGAMADLKSFHSCGVYGMAAVTSIVA
                     QNSMGVQHIHNLEASWLEEQLASVFNDEMPHALKTGMIPTPEMMEVIASNLKKVDIPY
                     VIDPVMVAKSGDSLMDQKVRNRLKETLLPYADVATPNVPEAEEIAGVTIDSVEKIHQV
                     GRFFIHDIGSKGVIIKGGHLEGDAIDHLFTQEGHYEFKSERFSTQHTHGTGCTFSAVI
                     TAELAKGKSVYDAVAKAKKYISLAIQHTPEIGKGRGPVNHFAYEKLNGWD"
     gene            complement(9458..10141)
                     /gene="tenA"
                     /locus_tag="PTC28_000514"
     CDS             complement(9458..10141)
                     /gene="tenA"
                     /locus_tag="PTC28_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiaminase II"
                     /protein_id="HDK5715832.1"
                     /translation="MRFSEQIKQEAQPIIEQIYHDGFIQGMLNGDIATESVKHYLRAD
                     SRYLNEFAKIYALLIPKVDTKDEIRFLTEQIQFASSGEVEAHHILADYVGEDYQTIIQ
                     RGDWYPSADHYIKHMYYNAYAFDNVAFTIAAMAPCPYVYQRLGKMAIENHHFEANHPL
                     KGWFDFYNREMDTLLSYIDRWLDSYAEVSSEKVQQQLRQNFLQSTVHERNFFNMADQL
                     EKWEFGGEK"
     regulatory      complement(10208..10311)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(10725..11081)
                     /locus_tag="PTC28_000515"
     CDS             complement(10725..11081)
                     /locus_tag="PTC28_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDK5715833.1"
                     /translation="MNNINHFQAVGIINRPPSFYEKEESYFVTFTVAVTREYLSKKQK
                     PITDYLNCKAFGNIALQIHETIQEGITVAISGQIQTRRYIHNDEKRYATELLVSQISP
                     IGAVTIESNTDEFNDE"
     gene            11262..11696
                     /locus_tag="PTC28_000516"
     CDS             11262..11696
                     /locus_tag="PTC28_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YwpF-like family protein"
                     /protein_id="HDK5715834.1"
                     /translation="MKTFKAVRFQIVSENSSVAEYELLDGVIINKENSGTGWVLEIVI
                     SDIHQEQMQAYMEAETLLDIRVVITRPSNDPALFDATIKHITPLNGSISVVFECHIYT
                     LRQVYAENLLEQLVNEGMQGQELITTFNRMMKSKPRLKDERQ"
     gene            complement(11810..12253)
                     /gene="fabZ"
                     /locus_tag="PTC28_000517"
     CDS             complement(11810..12253)
                     /gene="fabZ"
                     /locus_tag="PTC28_000517"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016426460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HDK5715835.1"
                     /translation="METIFNYNEIKNIIPHRQPFLLIDKVVEYEPGQRCVGIKQVSGN
                     EPFFQGHFPDYAVMPGVLITEALAQTGAVAMLNSEENKGKLALFAGIDKCRFKKQVVP
                     GDTLVLEVEITKIKGPIGKGTAKATVDGQIACSCELTFALQDPNA"
     gene            complement(12253..12462)
                     /locus_tag="PTC28_000518"
     CDS             complement(12253..12462)
                     /locus_tag="PTC28_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HDK5715836.1"
                     /translation="MKELMTKWRYGLQTLMDSTSFKLTLFVFIAIMMFVVGLMTGFII
                     NHDNVLNTFNLRFWQHIIETIGGHH"
     gene            complement(12443..13708)
                     /gene="murA"
                     /locus_tag="PTC28_000519"
     CDS             complement(12443..13708)
                     /gene="murA"
                     /locus_tag="PTC28_000519"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HDK5715837.1"
                     /translation="MDRIIVKGGNTLKGEVGVEGAKNAVLPILTASLLASDGKSELVN
                     VPALSDVETINNVLSVLNAKIKYNEKQQSVTVDASKDLSEEAPYEYVSKMRASILVMG
                     PLLARLGRAKVALPGGCAIGSRPIEQHLKGLEALGAEIHQEAGYIYAEAPQGLVGNEI
                     HFDFPSVGATQNIMMAASLAKGRTVIENVAREPEIVDLANYINEMGGDIKGAGTDTVI
                     INGVESLKGVKHAIIPDRIEAGTLMIAAAITRGDVLVKGAIKEHMTSLVYKLEEMGVE
                     LDYTEEGIRVTAPEKLQPVDIKTLPHPGFPTDMQSQMMALLLTAEGHKVVTETVFENR
                     FMHVAEFKRMNAQISVEGRSAKIEGKSALQGAQVKATDLRAAAALILAGLVADGETIV
                     TELKHLDRGYVDFHGKLKSLGANIERIND"
     gene            complement(13819..14049)
                     /locus_tag="PTC28_000520"
     CDS             complement(13819..14049)
                     /locus_tag="PTC28_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1146 domain-containing protein"
                     /protein_id="HDK5715838.1"
                     /translation="MDYLGQFAIAHIIMHVLCICVAYWGLNAVRLDQFFKKGFPLQVQ
                     VIMIFLAIVIGTSVSNFIIDLLQFSTQIKYLF"
     gene            complement(14442..14846)
                     /locus_tag="PTC28_000521"
     CDS             complement(14442..14846)
                     /locus_tag="PTC28_000521"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HDK5715839.1"
                     /translation="MNTLTLDIVTPNGSVYKEDNVEIVVLQTTAGEMGVMYGHIPTVT
                     PLRIGHVKVTKDGKSDYIAVTEGFAEIRHEKVNILAQAAESADDIDLERAKSAKQRAT
                     FYLEGDRDDTDLRRAERALKRAENRIEVAKYK"
     gene            complement(14869..16281)
                     /gene="atpD"
                     /locus_tag="PTC28_000522"
     CDS             complement(14869..16281)
                     /gene="atpD"
                     /locus_tag="PTC28_000522"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017636767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HDK5715840.1"
                     /translation="MGLGRVTQVMGPVIDVRFEHNEIPNINNALLIDVSRDGETESLT
                     LEVALHLGDDVVRTIAMDSTDGVQRGAEVRDTGAAISVPVGDATLGRVFNVLGEHIDL
                     EEPIDAAVRRDPIHREAPKFDELSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVG
                     KTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYEMKDSGVIAKTAMVFGQMNEP
                     PGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQP
                     TLATEMGQLQERITSTNKGSVTSIQAVFVPADDYTDPAPATAFAHLDATTNLERKLSE
                     MGIYPAVDPLASTSRALEPTIVGQEHYDVARQVQSTLQKYRELQDIIAILGMDELSEE
                     DKKTVERARRIQFFLSQNFHVAEQFTGQKGSYVPVKQTVQDFKAILDGKYDHIPEDAF
                     RLVGGIDDVIAKAKDMGVEV"
     gene            complement(16306..17172)
                     /locus_tag="PTC28_000523"
     CDS             complement(16306..17172)
                     /locus_tag="PTC28_000523"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011302681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HDK5715841.1"
                     /translation="MASLKEIDSRIKSTKKTKQITNAMNMVSSSKLRKAEKNAMTFRP
                     YMEKMKDAITAIAGSNRVSSHPMLNERPVKRVGYMVITSDRGLAGAYSANVLKKMIRD
                     IEQRHNSPEEYRIIVLGQIGATFLQNRGYQLENTLTDIPDQPAFKTIQAIGKRAIDLY
                     VDEQIDELHIYYSHYVSVIENKPSSKKLLPLSPEDSSLGHGAMATYEFEPDKDAILKI
                     LLPQYIESLIYGTILDAKASEHASRMNAMKNASDNATEMIDDLSLQYNRARQAAITQQ
                     ITEIVGGSAALE"
     gene            complement(17210..18721)
                     /locus_tag="PTC28_000524"
     CDS             complement(17210..18721)
                     /locus_tag="PTC28_000524"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001829913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HDK5715842.1"
                     /translation="MAIKAEEISALLRSQIENYESEMSVTDVGTVIQIGDGIALVHGL
                     NDVMAGELLEFHNGVLGLAQNLEETNVGVVILGPYDEIKEGDEVKRTGRIMEVPVGEE
                     LIGRVVNSLGQPIDGQGPLNTTKTRPIEKKATGVMARKSVDEPLQTGIKAIDALVPIG
                     RGQRELIIGDRQTGKTTVAIDTILNQKDQDMICIYVAIGQKESTVRAAVEKLRQAGAL
                     DYTIVVSASAAQPAPMLYIAPYAGVTMAEEFMFNGKHVLIVYDDLTKQAAAYRELSLL
                     LRRPPGREAYPGDVFYLHSRLLERAAKLNDDLGGGSITALPFVETQAGDISAYVPTNV
                     ISITDGQIFLQSDLFFSGIRPAINAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYREL
                     ESFAQFGSDLDEATASKLERGKRTVEVLKQDQNKPLPVEHQVLIIYALTRGYLDDIPV
                     VDITRFEAEIIEWTKSNANEIFTEIRETGGLPADEKFESAINEFKKGFKASEE"
     gene            complement(18748..19287)
                     /locus_tag="PTC28_000525"
     CDS             complement(18748..19287)
                     /locus_tag="PTC28_000525"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HDK5715843.1"
                     /translation="MANVAQKYAQALYDVTLSHNILSEVYDEFTEINTAVESQIDYLK
                     GIDYEPKITIADRRHIVDNVFAGTQPYLMNTLKIVAGHRNLHLIPAIFKAFEAQYYQF
                     HGLADAYVESASTLNEDELMQVTNALLDRTGLKDLIIHSTVNEELIGGVRVKIGTKVY
                     DGSVQNDLNQLVKKFNRVH"
     gene            complement(19287..19811)
                     /locus_tag="PTC28_000526"
     CDS             complement(19287..19811)
                     /locus_tag="PTC28_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HDK5715844.1"
                     /translation="MIVTANLFTLAAAGGGVNIGDIIVTVVTFLILLALLRKFAWGPL
                     KKVMDDRERSINQDIDDAERAKLNAQRLEEENRQKLKETQDEVHKILEDAKLQARRQQ
                     EEILHEANQRANGMLETAQSEIKSEKERALAEINNQVSELSVLIASKVLRKEISEQDQ
                     KALIEKYVKEVGDK"
     gene            complement(19972..20184)
                     /gene="atpE"
                     /locus_tag="PTC28_000527"
     CDS             complement(19972..20184)
                     /gene="atpE"
                     /locus_tag="PTC28_000527"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HDK5715845.1"
                     /translation="MNLIAAAIAIGLSALGAGIGNGLIVSRTVEGVARQPEARTQLMS
                     IMFIGIGLVEALPIIGVVITFIVLFI"
     gene            complement(20227..20949)
                     /gene="atpB"
                     /locus_tag="PTC28_000528"
     CDS             complement(20227..20949)
                     /gene="atpB"
                     /locus_tag="PTC28_000528"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HDK5715846.1"
                     /translation="MDHKHPVVTWHFLGVDINFNLSTIMMLLVTAVIVFVIAVLCTRN
                     LQKRPKGAQNFIEWVFDFVRGIIESNMAWSKGGQFHFLAVTLILFIFVANMLGLPLQF
                     VNGHTLWWKSPTADAHVTLTLATMMVLLTHYYGVKMRGPKAYLKGYSKPYLALLPINV
                     FEEFASTLTLGLRLYGNIYAGEILLGLLSKVTLTVAFGFIIGIPGLIIWQGFSIFVGS
                     IQAYIFIMLSMVYMSHKVADNH"
     gene            complement(20984..21340)
                     /locus_tag="PTC28_000529"
     CDS             complement(20984..21340)
                     /locus_tag="PTC28_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HDK5715847.1"
                     /translation="MNRFYKMFQPFLTYYATILAGLLILYSLDVQQPIVLGLIVGIIA
                     SIVNTCIFEYYLWRAKRFSAEPISTGNGWRYLVAILACVIWVLFQAQIHILGVLIGLM
                     VSYVLMVFRPLLKKES"
     gene            complement(21509..22648)
                     /gene="wecB"
                     /locus_tag="PTC28_000530"
     CDS             complement(21509..22648)
                     /gene="wecB"
                     /locus_tag="PTC28_000530"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HDK5715848.1"
                     /translation="MKRIMTIFGTRPEAIKMAPLVLQLKKDEALEPIVVVTAQHREML
                     DSVLDTFGIEPDYDLNVMKQGQTLSEVTSRVLLGLEDVIKKAQPDMILVHGDTTTTFA
                     GSLAAFYNEISIGHVEAGLRTWNKYSPFPEEMNRQMTGIMADLHFAPTEQAQANLLQE
                     NKDPEKVVVTGNTAIDAMHTTVDPQYQSDIIQRHQDKRIILLTAHRRENIGEPMHHIF
                     KAARRIVEEFEDAVIVYPMHKNPKVREIAYKHLSNHERIELIEPLEVVDFHNFAHQAH
                     FILTDSGGVQEEAPSLGKPVLVLRDTTERPEGVEAGTLRLVGTEEADVYEATKALLTD
                     EALYEAMSVAQNPYGDGQASQRICENIKYFYGLIDQKPAPFRVDK"
     gene            complement(22671..23300)
                     /gene="upp"
                     /locus_tag="PTC28_000531"
     CDS             complement(22671..23300)
                     /gene="upp"
                     /locus_tag="PTC28_000531"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017636774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HDK5715849.1"
                     /translation="MGKVHVFDHPLIQHKLSFIRDVNTGTKAFRELVDEVGMLMAYEV
                     TRDLELQEVEIETPVTKAIAKRLSGKKLAFVPILRAGLGMTTGILNLVPAARIGHVGL
                     YRDPETLEAIEYFVKLPQDIEEREIIVVDPMLATGASAIEAINSLKKRGAKHIRFMCL
                     IAAPEGVEKLQAAHEDVDIFIAALDEKLDDNAYIIPGLGDAGDRLFGTK"
     gene            complement(23334..24572)
                     /locus_tag="PTC28_000532"
     CDS             complement(23334..24572)
                     /locus_tag="PTC28_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HDK5715850.1"
                     /translation="MSFLAKQDKSVFESIQKEFHRQNTSIELIASENFVSEAVMEAQG
                     SVMTNKYAEGYPGRRYYGGCVFVDQTEQLAIDRAKALFNAEHVNVQPHSGSQANMAVY
                     LVALEHGDTVLGMNLSHGGHLTHGSPVNFSGKFYNFVEYGVTKDEEHIDYEEVRKLAK
                     EHKPKLIVAGASAYSRSIDFKKFKEIADEVGAKLMVDMAHIAGLVAAGLHQNPVEFAD
                     FVTTTTHKTLRGPRGGMILCKEEYKKEIDKTIFPGIQGGPLEHVIAAKAVAFGEALQP
                     EFKTYQQQVIKNAQMLAKTLKDNGFRIVSGGTDNHLVSVDVKGSVGITGKVAEEALDE
                     IGITCNKNTIPFDQEKPFVTSGIRLGTPAATTRGFDENAFEEVGRIISDVLKNHEDQK
                     VLADAKSRVQALTEKFPLYQ"
     gene            complement(24593..25120)
                     /locus_tag="PTC28_000533"
     CDS             complement(24593..25120)
                     /locus_tag="PTC28_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01440 family protein"
                     /protein_id="HDK5715851.1"
                     /translation="MQDLNQLLEELKAQSFFNEGEICVIGCSTSEVQGERIGTTGSID
                     VAQEIFEALVKIQQETGVSFAFQGCEHINRAITIERKDFDPYVMTEVSVVPDVHAGGS
                     LSTHAYRHMEAPMVVEHIRADKGIDIGQTLIGMHLKHVAVPVRTTVKQVGQAIVTVAT
                     SRPKKIGGERAKYQL"
     gene            complement(25238..25663)
                     /locus_tag="PTC28_000534"
     CDS             complement(25238..25663)
                     /locus_tag="PTC28_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight protein arginine
                     phosphatase"
                     /protein_id="HDK5715852.1"
                     /translation="MKIVFVCTGNTCRSPLAESIAKQLMPDFEIVSRGLMAQEGQPIS
                     SHSRELLQRHELPIPKGAQLFDAGDAEADLILTMTTAHRQMIQAMYGPQVNVYALNDY
                     VDEDLPVEDPYGGQYETYEQVFEQLTRMIDKLKSKLVTE"
     gene            complement(25660..26712)
                     /locus_tag="PTC28_000535"
     CDS             complement(25660..26712)
                     /locus_tag="PTC28_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HDK5715853.1"
                     /translation="MSETKIWDVRDYTTRLEEYPKLPEIVKTLQDGGLVVLPTETVYG
                     LGGNAKDDTAIRKIYEAKGRPSDNPLIVHIHDTDQLDDFVADISESTRKLMEAFWPGP
                     ITFILPLKQGFLCDRVTGGLNSVAVRMPSHPVALALLKAVDLPIAAPSANLSGRPSPT
                     TFEHAFHDLNHRVEGIMRSTQSDAGLESTVVDCTSFPFRIARPGTITRNMLNDILPQS
                     VEVHSPLATEKPIAPGMKYRHYAPSTPLKMITQLNAPIHEDAHEDWSKIAFIVPETKK
                     KFLPASAQVIVISESESDIQGANHNLYDVLHQLDQLNDVDMAYIYGFEDNFDTEALRN
                     RMLKAVSQQVVKGESL"
     gene            complement(26878..27720)
                     /gene="prmC"
                     /locus_tag="PTC28_000536"
     CDS             complement(26878..27720)
                     /gene="prmC"
                     /locus_tag="PTC28_000536"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDK5715854.1"
                     /translation="MNYKEWRQQAEQQMVVKGYEPNAIQWFMMDTLQWSRTSLILNEM
                     TPMAESTLKQLNDGLSQLLTGMPVQYVVGQSEFYGRQFKVNSDVLIPRPETEEVVHYF
                     LTQLAAAKVVADIGVGSGAIAITLKAERPELRVIATDISFQALAVARENAQRLQRDIT
                     FLQGNALQPLIDQDVRLDGLISNPPYIGEHERTLMDNSVIQYEPHVALFATQEGYQVY
                     AAILRDLPHVMQDGAPVVFEIGFQQGAQLTRMMQQLYPHITPEVINDINGHARIFHFK
                     WTQP"
     gene            complement(27710..28786)
                     /gene="prfA"
                     /locus_tag="PTC28_000537"
     CDS             complement(27710..28786)
                     /gene="prfA"
                     /locus_tag="PTC28_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HDK5715855.1"
                     /translation="MFDQLDIVEERYEQLNELLSDPEVVSDSNLLRKYSKEQSELQKT
                     VEVYRQYKQVKEDAEEIELMLAETDDADEVEMLKEEASALKAEVPELEEQLKLLLIPK
                     DPNDEKDVIVEIRGAAGGDEAAIFAGDLFRMYSKFAESHRFKLEIVEATESDHGGYKE
                     ISFSVSGDGVYSKLKYENGAHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNE
                     DLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGVIATSSEKSQIQNREKAMKVLKARLY
                     DMKLQEEQQKYAAQRKSAVGTGDRSERIRTYNYPQSRVTDHRIGLTLQKLDQIMEGKL
                     DEIVDALTMHEQTEKLKELNTGEL"
     gene            complement(28786..29388)
                     /locus_tag="PTC28_000538"
     CDS             complement(28786..29388)
                     /locus_tag="PTC28_000538"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HDK5715856.1"
                     /translation="MYEAYHSGWIECITGSMFSGKSEELIRRLRRGVYAKQKVVVFKP
                     TIDDRYHKEKIVSHNGNEIEAINISKASEIWHHDLNGVDIIGIDEIQFFDRDIVDIAQ
                     TLAERGYRVITAGLDMDFKGEPFHPVPEMLAVSEHITKLQAVCAVCGASSSRTQRLID
                     GKPAKVDDPIILVGANESYEPRCRAHHIVAPSENDKEALE"
     gene            complement(29736..29990)
                     /locus_tag="PTC28_000539"
     CDS             complement(29736..29990)
                     /locus_tag="PTC28_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HDK5715857.1"
                     /translation="MKQGIHPEYRKVIFLDTTTDYKFLSGSTKFSNETMEWEDGNEYP
                     VIRLDISSDSHPFYTGRQKFAAADGRVERFNKKFGLKSDN"
     gene            complement(30113..31426)
                     /gene="rho"
                     /locus_tag="PTC28_000540"
     CDS             complement(30113..31426)
                     /gene="rho"
                     /locus_tag="PTC28_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HDK5715858.1"
                     /translation="MSRERTSPQYESFHELYKNYTTKALTEKAKSLKLVNYSKLNKKE
                     LVLAIMEAQMEQDGNYYMEGILDDIQQDGYGFLRTVNFSKGEKDIYISASQIRRFEIK
                     LGDKVTGKVRKPKENEKYYGLLQVDFVNDHNAEEVKKRPHFQALTPLYPDERIKLETE
                     PRNYSTRVMDLITPIGLGQRGLIVAPPKAGKTTLLKEIANAIVTNKPNAKLFILLIGE
                     RPEEVTDIERSVDEAEVVHSTFDEHPKHHVKVAELLLERAKRLVEIGEDVIILMDSLT
                     RLARAYNLVVPPSGRTLSGGLDPASLHGPKTFFGAARNIEAGGSLTILATTLVDTGSR
                     MDDMIYEEFKGTGNMELHLDRRLSERRIYPAIDISRSSTRKEELLVPKNELDSLWQLR
                     NMFSNSPDFTERFIRKLKKTKSNAEFFELLQQSAAESSKTGKPII"
BASE COUNT         9249 a         6716 c         5396 g        10286 t
ORIGIN      
        1 tatattttag aattagattt aagcacaaag taatttatat tttatctcta gtactaattc
       61 ttgtataaaa gcaatacgtt cagaaattta taatcttcac cattatgcag ctttcataag
      121 taaaactatc ccactaaaaa ccattcaatc ctccttaaaa ttaattacta ttgtcaaccg
      181 ctgattcgtt ttagattcaa tcgatagaac acatcaattt ataccaaaaa catataaact
      241 tatatattaa gattttgatg ttcatatcgc tacatctccc ttgttttttc accatgatgt
      301 acacttcgat tttgtcatcg ggttctctct taaacttata ttgattttgg attgcggaac
      361 tggccgagac tcctgaggga tcagacgtag ccgaaaatcc aattcggcca ccatccagtg
      421 ttctctccaa tcaagccgaa tttagttgag gcaagtcccc taggaaagca aggccaaaga
      481 ggagcaatca acaaaatcaa taatatttct ataactcccc cgattacaaa atcgaagata
      541 ctcaacgaag tgtttaaaag gtagagttga tatttagcta agtgtttaaa aaggtaaagt
      601 ttaaaaatct gaaaaaaagc acctagacgt gacatcagtc aacatctaag tgcttctcaa
      661 acatacttaa taaggtttca atttctcagt tgcaggatta ggtttgggta atgatcgcat
      721 aatatctaat cggggcttcg tttttttcac cttcacaccg attgaagata acatttggac
      781 cacattttga agcttatcat tctttttcgc catttgatca ccccgtattc tgctatctac
      841 tcctttatct taccctaaat tgtagcgctt tactacacca aattgtaaat tgataaaatt
      901 attttttcac attttttaat cgcaaggcat ttaatacaac tgaaactgaa ctaaatgcca
      961 tcgctgtacc tgcaacccaa ggtgctaaaa agcctgctgc agcaataggg ataccaatca
     1021 aattataaca aaaggcgaaa aataagtttt gtttaatatt tttaatcgta aggcgactaa
     1081 gttgaagtgc atcggcaata ccgtccaaat gattacgtac aagcgcaatg tctgcggatt
     1141 ctaatgcgat gtctgagcca gaacccattg cgacgccgat atcacttttc attagtgctg
     1201 gtgcatcatt aatgccatca ccgaccatca tgacacgttt tccttcgttt tggagttcag
     1261 taacgacttt agatttttca tctggtttca cttctgcgat gacacgtgta aagccgagtt
     1321 cacgaccgat tgcttgcgct gtctgtttac tatctccact caacatcact aagtcgtaat
     1381 ttttgtttaa cgtttcaatg actgctttcg cttctgcttt tggctcatct ctcacaccga
     1441 tgattgcgac gagtgtttca ttaattgtca taccaaccac tgttgcgccc tgttctgcca
     1501 ccgaatgtat tctatcttgt tgttcttgag ttaagtcgtt gtttgtaacg aaacgaatgg
     1561 aaccgatacg cacacggttg tcgtcaataa cacctgaaat accacttcct gcatgtgtct
     1621 catattgcga aacagtgtgg accgcttcgt cactataata atcgactaac gctttagaca
     1681 gtggatgctc tgattgcatt tccagacttt taacataagc gccaatagtt ggttcttccg
     1741 tttcatggta cacgtgcacg actttaggtt cgccgttcgt aattgtacca gttttatcaa
     1801 agacaatcgt atcgacatgt tgggcttgtt ctaatgcttc tgctgtttta aataaaatac
     1861 cagattctgc tgcacgacct gacccaacca taatcgaagt cggtgtcgca agtcctagag
     1921 cacaaggaca ggcaatgacg atgacagcga tgaaaatttc aaatgctgcc gtaaattgaa
     1981 acggtgtgac aacgaaaaac catacgataa atgacagtaa tgccaacaca acgacagtcg
     2041 gtacgaaaat atttgaaatt ttgtcagcta accgttgaat ttgtggttta tcattttgcg
     2101 cttcttcaac gactttaata atttgattca atactaaatc ttcaccaaca tgggtcactt
     2161 gaagtttaat aaaattcgtt tggttgattg tacttccaat gacagtatcg ccgatatttt
     2221 tttcaacggg catactttcc cctgtcaaca tcgcttcatt gaccgttgtg gaaccttcaa
     2281 tcacttgacc gtctaatgga atttgttgac cacttctcac ccatacaatg tcacctacac
     2341 ggacatcatc aatcgcaatc atttcaatct tgccatcacg ttccacttcc gcatctttca
     2401 cttgtaatgc agcaagtttg ctaatcgcgt cactcgcatg cccttttgca cgcatttcga
     2461 aatatttacc taataaaatg agtgtaatta ataccgcact cgtttcaaaa taaagtggta
     2521 catgaccgct atggcccaaa tgtgtcaaca ttaaataaag actataaaag taagccgctg
     2581 aagtgcccat cgcaacgaga acgtccatgt tcgcactttt acttttcaaa gatttataag
     2641 caccgacata aaattgccag ccgagtacaa attgaatcgg cgttgctaat ataaattgaa
     2701 accagccgtt cattaaaagt tctggaactg gaataaaacc taaaaatgaa aaatggccga
     2761 acatcgtata cagtaacggt aatgctaaaa tgagtgaaat aatgaatttc cctttttgtc
     2821 gcttcaattc atcacttttt cgtttagctg tttcatcttt cgtctccatt ggaaaagctt
     2881 catacccgat tttagcgaca cgttcataaa tctcttcaat cgaaatctgg ctcggatcgt
     2941 acttcactgt cccattttcc atcactaagt tgacattaat ttggtcaatt cccgcttcac
     3001 gctggagcac ccgttcaata cgtgctgaac aggcggcaca tgtcatacct gtaattttga
     3061 aagtttcttc ttgagtcatt atgtcatctc ctatacctat agagggtata ttttaaatac
     3121 gaaatgaggg cttacctctc atctcttcaa tgaaaaacta agccctgatt gctgttaaat
     3181 tatgatataa cgtcataccc ttgatcgtaa atacgttgtt tcacatctgc taatgcactg
     3241 tcatctgtta cttctacttc tactctgttg tcagctggaa atgcttcaac gtgggtcaca
     3301 tgcgcatttt ctttcactgc accttcaact gctgctttac aatgcgcaca agtcatacct
     3361 tctacttcaa tcatatgttt tgccatcagt tacactcctt tatgtgattg gataacagga
     3421 aatcctgcat cataaatttc tttttctatc gtgttcaaat ttgctggcgt gtcataagtg
     3481 agcgtcaacg attgtgttgc cacatcaata gcaacagact cgacaccaat taaacgaagc
     3541 aaacgatcag atagctgttg ttgctgtgct tcagttgtca gttgtgttac tttaacataa
     3601 ccattttcca taattgtacc tcactaatct ttcatgagtt tttgaaatgt tactaataac
     3661 tcttccatcg cttcgtcttg gtgtcccgcg tcaatcttat gcttgatgca tcctttcata
     3721 tgatgatcta acagacgcga cgccacactg tttaaagccg aacgtgtcgc tctaatttgc
     3781 gtcaacacgt catcacaata gacatcttcg tcaatcattc ggttgattgc tttcacttgg
     3841 ccttcaatac gattcaaacg cgacttcaag ttacgtttaa tttcttcaga atgatgtgct
     3901 tgttcagtca tgtcacatcc cccagattca ttttgatatt attatgatat accctgtata
     3961 ggtatatgtc aatgcgtaaa attcctctat tttatagaac atgatacaat aaaagcactt
     4021 cacgaaaaag gagataaaag tgatgccaga gtttttttat gcgatatttt ataatcacaa
     4081 tgtactgttc aattacatat tagtcggtgc atttttatta aatttaatct tcatctttac
     4141 cattattttt atggaacgaa gaagtgcgag ttccatctgg gcatggattt ttgtattagg
     4201 cttattcccg cttgtaggct ttgtacttta tttattattc ggccgacaaa tccagagaaa
     4261 atccattttt aaacttgaaa aacaagatcg tatcggttta gactctatcg tgaatgatca
     4321 acttactgca attaaaaatg gagaatttga agttgataac ccccatattc aaaactacag
     4381 tcgtatgatc caaatgttac tgtataacaa tgctgccttt tatacgaaca ataacgaaat
     4441 taagttattg acagatggta acgaaaaatt cgattgttta aaggaagata ttcgtaatgc
     4501 agagcgctat gtacatattc aatattatat tttccgtcac gatacccttg gtaaaagtat
     4561 tttaaaactg ttagaagaaa aactcgaaca aggtgtagaa gtcaaaatgt tatatgatga
     4621 catggggtcg cgcgcactca cattacgcga ttttaaacgc tttaaagaaa aaggaggaca
     4681 tgtagaatca tttttcccat ccaaactgcc gctcattaat ttacgaatga acaatcgaaa
     4741 tcaccgaaaa attgtgatca ttgatggtca gatcggctat gtaggtggct ttaatgtcgg
     4801 aaatgaatat ctcggcttat ctaaaaagtt tgggtattgg cgtgatacac atttacgtat
     4861 tcaagggaat gctgtcagtg cacttcagtt gcgtttcatt ttagactgga actctcaatc
     4921 gcaccgtgac aacattacct atagtagtca atatttccca aaaccgcaac agactcataa
     4981 tggcaatatt ggggttcaaa ttgcttcaag tggtccagac gaattttggg aacaagtcaa
     5041 atatggttat ttaaaaatga tttcgatggc gaaaaatgat atttacattc aaacacctta
     5101 cttcgtgcct gatgaagctt ttatggatgc gcttaaaatt gcagctttag gtggcgttaa
     5161 cgttaatatt atgattccat cgaaacctga tcacccattc gtttactggg ccacttttaa
     5221 aaatgtcgcg agtttactcg aggccggcgc acgtgtttac ctttatgata acggcttttt
     5281 acacgcgaaa acattaacca ttgatgatga aattacgagt gtaggtacaa caaatatgga
     5341 taatcggagt tttaccttaa attttgaagt gaatgcattt gtatataatg aaaaattagc
     5401 gagagaagta cgcgaaagtt ttgaagaaga cttaaaagta tgtagcgaat tgacgaaaga
     5461 acgctatgcc caacgcagct tatggatcaa atttaaagag tccgtcagtc aattgctctc
     5521 ccctatttta taacttaagg aatgactaac aaaatgaaac aacagcatat tcaagcagca
     5581 gaacaatata tgagaaagac acatcaacat gatagtagtg gacacgacat cgcgcatgtg
     5641 ttacgtgtta gaaagcgcgc ccttgaaatc gcacaacact atccatcagc tgacccttac
     5701 catatcgaaa tggcatcact cctccatgac actgttgatg acaaattggt agacgtcaaa
     5761 agtagccgtc aagcattatt tgcatttttt aaggaacaag gtgtatcagt aatggatcaa
     5821 gaagccatta tttacattat tgaccatatg agctttcgaa aaactaaaaa agtcggtaca
     5881 ctgaaaacaa ttgaagcaca aattgtccaa gatgctgaca gacttgatgc tatcggcgca
     5941 attggcattg cacgtacatt tcaatttgct ggtcacttta atgaaccgat gtggacaggg
     6001 acacatcggt taaccgaaat gtatcaactg tcagacatag acgcggtacc accatcagca
     6061 atcaaacact tctttgaaaa gctactcaaa ttaaaagatt taatgaatac acctgtagca
     6121 aaagacatgg cgcaacaacg tcatgatttt atggaaagtt ttttacaaca attttttgct
     6181 gaatgggaca ctgaaatcaa acggtcatga ataggaaaag gctgggaact tagcatccca
     6241 gcctttaagt atgtgcaata tgattatttc tttttgttct ttttacttac aacttgtgtg
     6301 tttttacctg ttttgttgcc atttttttct gcttcaaact ttttaattaa tggcgccact
     6361 tcttcttttg cttttttacc atataccaca ttggcaatat aagtttgaac tacaaggaaa
     6421 gctgctgata ctgaccaata taaacctaac gccgccgcag agctgaatga aatccacaca
     6481 atcataattg gtgagataat catcatcata taacccattt gacgttgttc ttgaggcata
     6541 ttaaaacttg acacataggc ttggatgaag taaaggacac ccgcaatgat agtaatccaa
     6601 atatccggtt tatctaaatg gaaccataag aaatctgagt acttcgtgat tccgccacca
     6661 gacggatatt ttaagacgaa gaataatccc atgatgattg gcatttgaag tataagcggt
     6721 aaacagccta acatacttgc cattggattc atgttatatt ttttgtatac ttgcatcatt
     6781 tcttggttcg ctgccatttt gtcttcttgt gtacgtgcac gttttacttt ttcttgcgct
     6841 tctgtaattt caggtttcgc aattttcatt ttttcacgca tcatatgcat gtttttgtaa
     6901 tttgataaca tgaaaggtaa taagacgata cgtacaacca atacgatgat aataatggct
     6961 aaaccatagt tattatttaa atgatcccct aaccagtgaa tcaatctgtc cattggttga
     7021 acaaacgtat tgaaaaagaa tccgtctcga ttactcggtt tactatagtc acaacccgct
     7081 agaagtaaaa ctacacctgc aagcattgtc attaacgctt tgttcttcat ttttccacct
     7141 ctaatgatat attcacataa atgatatttt atcatagaaa tagacgcggt ggaaacatat
     7201 tccggcataa attgaacttt atttaaaata ttgtaagtaa cgtttcacag atttttcaat
     7261 atctgtactg tgtgtaattg atgaaatcgt cgcaatacca tcagcgccgt ttttaagaag
     7321 tggcgccaca ttttcttcag taattccacc aatagcgacc atcggaatgt tttcatcgta
     7381 ttctcgcata cgtcgaatta aacggatgcc acctggttta cttgcatcca acttagaact
     7441 tgtttcatat acagggccca caccaatata atcgacattg gtaaggtcag actgatcata
     7501 ttcttcaaaa cttccgacgc tgaggccgat aattttatct tctaataaat gttgaaatga
     7561 ctgtactttc gcatcttctt ggccaacatg tataccatct gcatcaattt caatcgctaa
     7621 atcaacatca tcattaacaa tgaagggtac ttgataatgg cgacacaagt ctcttaaacg
     7681 aacggccatt gcagttttct cctcaccttg taaagatgaa gagccttttt cacgaaattg
     7741 atacatcgta atacccgctt ctaacgcttc ttttaaaata ccatctaggc taccttgttt
     7801 gacatcttgt gtacctgcaa taaaatacac acgtaattgt tttcgattaa atgtcatttt
     7861 cactcacttc tctcttttta atctccaata aataggactc agctaaagtt tggtttaatg
     7921 catcgataaa agcgactaaa aatgtacccg gtaaatctgc accttcacgt aattcagctt
     7981 gttctgctga aatgttatag tacgaaacgg cttcgatgag ttggtcgata gatggttttg
     8041 tttcacctaa tagaaaactt gccaccaccg cgcctaataa acaacctgct ccggtaattt
     8101 ttgtcaacaa tggagaacca tttgataaga tgaccacctt accatcgtgt acaatgacat
     8161 cctctttacc tgagaggaca atcgcggttt gatacttttc gtaagcttgt tgtgcaatgc
     8221 tgaccacatc aatatcagaa gcactatctg ttcctttcat cgtcgtcgct gtatccacta
     8281 atgtcaatat ttcagatgca ttgcctttaa tgacagccac atcaatttct tctaaaaagc
     8341 gttgacaaaa atctttacgg aattgcgatg cgcctactgc aacagggtca aaaacaatgg
     8401 gtacacccat ttgattcgca gacttagcaa tggtaagcat gtcttcacta tttctcgtgg
     8461 ttaacgtacc tatattgatt aataagcctt gtgttacctt gaaaaaatct actgcttctt
     8521 ctggtgcttc actcattgcc ggacttgccc ccatactcaa caaaccattc gcagtaaaat
     8581 ttttgacgac atcatttgta taacaaacga caaggggttg ttgctttctg actgctgcta
     8641 aataattcat gttaatccca cccatttaat ttttcatatg caaagtgatt cactggacct
     8701 cgacctttac caatttctgg tgtatgttga atcgctaatg agatgtattt ttttgcttta
     8761 gctacggcgt cataaactga ttttccttta gctaattcgg ctgtgatgac ggctgaaaat
     8821 gtacatcctg tgccgtgtgt atgttgcgtt gaaaaacgtt cacttttaaa ctcgtaatga
     8881 ccctcttgcg taaataagtg atcgatggca tcaccttcta aatggccacc tttaataatg
     8941 accccttttg aaccaatatc atgaatgaaa aagcgaccaa cttgatgaat tttttccacc
     9001 gaatcgattg taacaccagc gatttcttca gcttctggaa cattaggtgt tgctacatct
     9061 gcataaggta acagtgtttc tttaagacga tttcgcactt tttggtccat taaagaatca
     9121 ccacttttag caaccataac tgggtcaatc acatatggaa tatccacctt tttcaaattt
     9181 gacgcaatca cttccatcat ctctggtgtc ggaatcatac ctgtctttaa cgcatgtggc
     9241 atttcatcat taaagacact ggctaattgt tcttctaacc aacttgcttc taaattatga
     9301 atatgttgta cacccattga attttgagcc acgatacttg tcactgcagc cataccatag
     9361 acaccacaag aatggaaaga tttcaagtct gccatcgccc ctgcaccacc acttggatct
     9421 gtgcctgcaa tcgttagcgc aatttttggt tttttcatca tttttctcct ccaaattccc
     9481 atttttcaag ttgatcggcc atattgaaaa agtttcgctc atgaaccgtg ctttgtagaa
     9541 agttttgtct taattgttgt tgaacttttt cggaactcac ttctgcatat gaatcaagcc
     9601 aacgatcaat ataggacaac aacgtatcca tttctctatt gtaaaaatcg aaccaccctt
     9661 ttaatggatg attggcttca aagtgatgat tttcaatcgc cattttacct aatcgttggt
     9721 acacatatgg acatggcgcc attgcagcaa tagtaaaagc gacattgtca aaagcatatg
     9781 cgttataata catatgttta atataatggt cggcagatgg ataccagtcc cctcgttgaa
     9841 tgatagtttg ataatcttca ccgacatagt ccgctaaaat atgatgcgcc tctacctctc
     9901 cagaactcgc aaactgaatt tgttctgtta aaaatcgaat ttcatctttc gtatccactt
     9961 tagggatcag cagtgcatat attttagcaa attcattcaa gtaacgtgag tctgcgcgta
    10021 aataatgttt aactgattct gtcgctatgt ccccgttaag cataccttgt ataaaaccat
    10081 catgataaat ttgttcaata atgggttgag cttcttgttt aatttgttca gaaaaacgca
    10141 tcttcattct cctttaatat gaaaaaagac tacgttaaaa gtagccttgt tcacacacta
    10201 aagcatgcgt gtccatgtgc tacttcccta cgttggtttc atccaaatca ggttcagagg
    10261 gtctgaatat ccattcatct cagccacaaa tcggcacccc tagtagtcct tcatttttta
    10321 gttaccttta atgtatcaga aacctaacgc aagttcaatt atgtaaaagc actaaacaaa
    10381 ttgcgaaata tatgtataat ttaacaaaac aaatgactct attagattat tttacatttc
    10441 ttatgaatca ttcgataaat attaatgaga ataaaagtgg tgattggcca ctaaatacat
    10501 gcacgtattt aatagccaat acacctcatt ttaaggttga tagatagaca atttaggtag
    10561 caggttatat accaaatttc actagagctc aagtcaatat gttgaagata aaagtaatgg
    10621 tgtgagataa atcgaattat ttcaatcgga gtatatactt tgagaagggt taataaaaat
    10681 aggtgggatg atcaaatatt ggaaaatctt tgcttgttgc tttgctattc atcgttgaac
    10741 tcatctgtat ttgactctat cgttactgca ccaattggag agatttgtga aacgagtaat
    10801 tctgtagcat aacgtttttc atcattatga atataacgtc tagtttggat ttgcccgctt
    10861 atggctacag ttatcccctc ttggatcgtt tcgtgaattt gaagagcaat gttaccgaac
    10921 gctttacaat ttaagtaatc agtgatgggc ttttgttttt tacttaaata ctctcgcgtg
    10981 acagcaacgg taaaggtaac aaagtaactc tcttcttttt cgtaaaaact gggcgggcgg
    11041 ttaatgatac ctactgcttg aaaatggtta atgttgttca cctcctgtac ccgtaatata
    11101 aacgtttcat tgtgaaatgg caaaatgcaa attcatataa aattaaagta tgtatcgaga
    11161 tatatttaag ccttatcgag aattatttta aaaattgcgt tataatgaaa agtaccatag
    11221 aaatttcgta aagtttttta aatgatatgg aggtggctcc aatgaagacg tttaaagctg
    11281 ttcgttttca aatcgtttct gaaaatagta gcgtggctga atatgaactc ctagacggtg
    11341 taattattaa taaagagaat agtggtacgg gttgggtgtt agaaatcgtt atttcagata
    11401 tacatcaaga acagatgcaa gcgtacatgg aggcagaaac acttttagat attcgtgttg
    11461 tcattacgcg accgtctaat gatcctgcac tatttgatgc gacaattaag catattacac
    11521 ctttaaatgg cagcatttca gttgtatttg aatgtcatat ttatacattg cgacaagttt
    11581 atgcggaaaa tttactcgag caattggtca atgaaggcat gcaaggtcaa gagctcatca
    11641 caacgttcaa tcgcatgatg aaatctaaac cacgccttaa agacgaacga caataagata
    11701 tgagacttac atacatgtac tatgttcaaa ttgaatcgtg aaaatgattt acaaagaacc
    11761 cataaaaaac cacctcatta tgaagacgag gtggtttttt atatttgatt tatgcgtttg
    11821 gatcttgtaa tgcaaaagtc aattcacaac tacatgcaat ttgaccatca acagttgctt
    11881 ttgcagtacc tttaccaatc ggccccttga tttttgtaat ttcaacttct aacactaaag
    11941 tatcgccagg caccacttgc tttttaaatc gacatttatc aattcctgca aataaagcga
    12001 gctttccttt gttttcttca ctatttaaca ttgctactgc acccgtttga gccaacgctt
    12061 cagtaattaa aacgcccggc ataaccgcat aatctggaaa atgtccttgg aaaaacggtt
    12121 cattaccaga gacttgttta atgcctacac aacgctgacc tggttcgtat tcaaccactt
    12181 tatcaatcaa taaaaatggt tgtctgtgcg ggatgatgtt ttttatttca ttataattaa
    12241 agattgtttc cattagtgat gtcctccaat tgtttcgatg atatgttgcc aaaaccttaa
    12301 attaaatgta ttcaacacgt tatcatggtt gataataaag cctgtcatta aaccgactac
    12361 aaacatcatg attgcgataa aaacaaataa agttaattta aaactagttg aatccattaa
    12421 tgtttgtagc ccatatctcc atttagtcat taattctttc aatattggca cctaaagatt
    12481 taagcttgcc atgaaagtca acataaccac ggtcaaggtg ttttaactca gtgacaatcg
    12541 tttcaccatc agctacaagt ccagctaaaa ttaatgctgc ggcagcacgt aaatcggtcg
    12601 ccttcacttg tgccccttgc aacgcacttt tcccttcgat tttagcgcta cgaccttcaa
    12661 ctgaaatttg tgcgttcata cgtttgaatt ccgccacatg cataaaacgg ttttcaaata
    12721 cggtttcagt caccacttta tgcccttctg ctgtgaggag taacgccatc atttgggact
    12781 gcatatctgt tgggaaacca ggatgtggca atgttttaat atcgacaggc tgtaattttt
    12841 ccggtgcagt cactcgaatg ccctcttctg tataatctaa ttcgacaccc atttcttcta
    12901 atttatatac gagacttgtc atgtgctctt taatcgcacc tttgacgagc acatcaccgc
    12961 gtgtaatggc agctgcgatc atcaatgtac cggcttcaat acggtcagga atgatagcat
    13021 gcttcacccc ttttaatgat tcaacaccat taatgattac ggtatcggta ccggcacctt
    13081 tgatatcgcc gcccatttca ttgatatagt tcgctaaatc cacaatttct ggctctctcg
    13141 caacattttc aatcactgta cgcccttttg ctaacgaagc tgccatcatg atgttctgtg
    13201 ttgcaccgac acttggaaag tcgaaatgaa tttcattacc aactagtcct tgaggtgcct
    13261 ctgcgtaaat atatcctgct tcttgatgaa tttcagcacc aagcgcttct aatcctttca
    13321 aatgttgttc aatcggacgt gaaccaatcg cacatcctcc tggtaatgcg actttagctc
    13381 gtcctaaacg cgccaataac ggccccataa ctaaaatact cgctctcatc ttactcacat
    13441 attcatatgg cgcttcttca cttaaatctt tcgacgcatc aacagttact gattgttgtt
    13501 tttcgttata tttaattttt gcatttaata cgctcaatac attattaata gtttccacat
    13561 cacttaacgc cggaacgttg acaagttcac ttttaccatc acttgctaac aaagacgctg
    13621 taagaatcgg caaaactgca tttttcgctc cttctactcc gacttcacct ttaagtgtat
    13681 ttccaccttt aacaataatt ctatccatct tattaatcct ccactatgct tacagctcta
    13741 ttctattttt gctctgaaaa taagtctatc tacccataac gtattaactt attttataca
    13801 ctttaaacat cttaacaatt aaaataagta tttaatctga gttgaaaatt gtaataaatc
    13861 aatgataaaa ttactcacac ttgtgccaat cactattgcc aaaaatatca tgatgacttg
    13921 tacttgtaat ggaaatccct ttttgaaaaa ctggtctaaa cgaacggcgt ttaatcccca
    13981 ataggcgaca caaatgcata aaacatgcat tataatatgt gctatcgcaa attgtcctaa
    14041 ataatccatt aattgatatt gctccttcac atataatctc ttttactaat tttacatgat
    14101 ttaaagccca aatcatacta taagcaactt aaagaaacac aatttttcac attataatgc
    14161 ttaatgacaa gcaatttaca ttttactggc tttcatagtt tttgtataga atttttgcaa
    14221 agcatgtgcc aacttttcag catgtgaaat gtaagcgtta tcaccttgag agtcgtctta
    14281 ctatatttac aaagtcagtc gatatgtcta catctactca aatgtgttta aggaaatttt
    14341 acaggttgct tcaatgtcga ccgttacctt gtcgccttga ataacgccaa aaagctcggt
    14401 ctgccacgag ggacataccg agctttttga tgtgcatatg attatttata tttcgcaact
    14461 tcgatacgat tttcagcgcg cttcaatgca cgttcagcac gtcttaaatc cgtatcatca
    14521 cgatcgcctt caaggtagaa agttgcacgt tgtttcgctg atttcgcacg ctctaagtca
    14581 atatcatctg ctgactctgc agcttgagct agaatgttca ctttttcgtg acgaatttca
    14641 gcaaaccctt ctgttacagc tatataatcc gatttgccat ctttagtcac tttcacatga
    14701 ccaatacgca atggtgtaac cgtcggaatg tgaccgtaca tcacacccat ctcgcctgct
    14761 gtcgtttgta agacaacaat ttcgacattg tcttctttat aaacagaacc attaggagtg
    14821 acgatatcta aggttaatgt gttcattatc caagcctcct aatttgtatt aaacttctac
    14881 acccatgtct ttagctttag cgatcacatc atcaatgccg cccactaagc ggaatgcatc
    14941 ttctggaatg tggtcatatt taccatctaa aatggcttta aagtcttgaa ctgtttgttt
    15001 aactggtaca tatgaacctt tttgaccagt aaattgctca gcgacgtgga agttttgtga
    15061 taagaagaat tgaatacgac gcgcacgttc aactgttttc ttatcttctt ctgataactc
    15121 atccatacct aagattgcga taatatcttg caattctcga tatttttgta acgtcgattg
    15181 aacttgacgt gcaacatcat aatgctcttg tccgacaatt gttggctcta aagcacgtga
    15241 cgttgaagcc aatggatcca ccgctgggta aatacccatt tcacttaatt tacgctctaa
    15301 gtttgttgtc gcatctaagt gagcaaaagc tgttgctggt gccgggtcag tatagtcatc
    15361 ggcaggtacg aatacagctt ggattgacgt aacagatcct ttgtttgttg atgtaatacg
    15421 ttcttgtagt tgacccattt ctgttgcaag tgtgggttgg taacctactg ctgatggcat
    15481 acgacctaat aatgccgata cctcagaacc tgcttgtgtg aaacggaaga tgttgtcaat
    15541 gaacaataac acgtcttgac cttgttcatc acggaaatat tcagccattg ttaaaccaga
    15601 aagtgcaaca cgcatacgcg cacctggtgg ctcgttcatt tgaccaaata ccatcgcagt
    15661 tttcgcaata acaccactgt ctttcatttc atagtacaag tcgttacctt cacgtgtacg
    15721 ttcacctaca ccggcaaata ctgaaatacc accgtgttct tgtgcgatgt tattgatcag
    15781 ctcttggatt aatacagttt tacctacacc ggcaccaccg aataaaccga ttttaccacc
    15841 tttaatgtat ggtgctaata agtcaacaac tttaatacct gtttctaaaa tttctacttc
    15901 tgtagagagt tcatcaaatt taggcgcttc acgatgaatt gggtcacgac gtacagcggc
    15961 atcaattggc tcttctaagt ctatatgttc acctaataca ttaaatacgc gtcctaatgt
    16021 agcatcgccg acagggacac tgattgctgc tcctgtatct cttacttccg caccacgttg
    16081 aacaccgtca gtagagtcca ttgcgattgt gcgtacaaca tcatcgccta agtgaagggc
    16141 aacttctaat gttaagctct cagtctcacc gtctcttgac acatcaataa gcagtgcgtt
    16201 gttaatgttt ggaatttcgt tatgttcaaa acgcacgtca attactggcc ccatgacctg
    16261 agttacacgg cctaatccca tgtttcttcc tccttataat caaaattatt ctaacgctgc
    16321 tgaaccacca acaatttcag taatttgttg tgtaatggct gcttgtcgcg ctcggttata
    16381 ttgtaatgat aaatcgtcaa tcatttctgt tgcattatct gaggcattct tcattgcatt
    16441 catacgtgac gcatgttcac ttgcttttgc atcaagaatc gtaccataaa ttaaactctc
    16501 aatatattga ggtaataata ttttcagaat ggcatctttg tctggctcaa attcataagt
    16561 ggccattgca ccgtgaccta agctagagtc ctctggagat aatggtaata attttttact
    16621 gctaggctta ttctcgatta cacttacgta atggctatag tagatgtgta attcatcaat
    16681 ttgttcatct acgtataaat cgatggcacg ttttccgatt gcctgaattg ttttgaatgc
    16741 aggctgatcc gggatgtcag ttaacgtatt ttcaagttga tagccacggt tttgtaaaaa
    16801 tgtcgcaccg atttgtccaa gtacgataat acgatactct tctggactgt tatgacgttg
    16861 ttcgatatca cgaatcattt tctttaacac gttcgcgcta taagcacccg caagtccacg
    16921 atcgctcgta atgaccatat aacctacacg tttcacagga cgttcgttca acatcggatg
    16981 tgatgaaact ctattcgacc ctgcgattgc tgtaattgcg tctttcattt tttccatata
    17041 aggacgaaat gtcatcgcat tcttctcagc tttacgtaat ttagaacttg ataccatgtt
    17101 cattgcattc gtaatctgct tcgtcttttt cgtcgatttt atacgtgaat caatttcttt
    17161 taatgaagcc accatctcac caccttatct attttaatca tctgttcaat tattcttctg
    17221 aagctttaaa accttttttg aattcattga ttgctgattc aaatttttcg tctgcaggaa
    17281 ggccacctgt ttcgcgaatt tcagtaaaga tttcgtttgc gttagatttt gtccattcga
    17341 taatttcagc ttcgaaacgc gtaatatcaa caacaggaat gtcatctaaa taaccacgtg
    17401 ttaatgcata aataatcaat acttggtgtt caacaggaag tggtttgttt tggtcttgtt
    17461 ttaacacttc aaccgtacgt ttaccacgtt ctaatttgct tgctgttgct tcatcaaggt
    17521 cagaaccaaa ttgcgcaaat gattcaagtt cacgatatga agctaagtct aaacgtaacg
    17581 tccctgcaac tttcttcatc gctttaattt gtgctgatcc ccctacacgt gatactgaaa
    17641 gacccgcatt aatcgctgga cgaataccag agaagaataa gtctgattgt aagaagattt
    17701 gaccatcagt aattgagatt acgtttgtcg gcacatatgc tgagatatcc ccggcttgtg
    17761 tttcaacaaa tggtaatgca gtaatcgaac cgccacctaa atcatcattt aatttcgccg
    17821 cacgctctaa taaacgacta tgtaagtaga atacatcacc tgggtatgct tcacgacctg
    17881 gtggacgacg taataataat gataactcac ggtatgctgc agcttgtttt gttaaatcat
    17941 catatacaat taaaacgtgc ttaccattga acataaattc ttctgccatc gttacacccg
    18001 catatggcgc gatatataac attggcgctg gttgtgctgc tgatgcagat acaacgattg
    18061 tgtaatctaa tgcacccgct tgacgtaatt tttcaactgc tgcacgaaca gttgattctt
    18121 tctgaccaat tgcgacatag atacaaatca tatcttgatc tttttggttt aaaatcgtat
    18181 caatcgctac agttgtttta cctgtttgac ggtcaccgat gattaactca cgttgaccac
    18241 ggccgattgg cactaaggca tcgattgctt tgatccctgt ttgtaaaggt tcatcaacag
    18301 atttacgcgc cataacacct gttgcttttt tctcgatagg acgtgttttt gttgtattta
    18361 aagggccttg tccatcaata ggttgaccta atgagttcac aacacgaccg attagttctt
    18421 cacctactgg cacttccatg atacgacccg tacgtttcac ttcgtcgcct tctttaattt
    18481 catcataagg acctaaaata acaacaccca cgtttgtttc ttctaagttt tgtgccagtc
    18541 caagtacgcc gttatggaat tctaataact caccagccat aacgtcgttc aatccgtgaa
    18601 ctaatgcaat accgtcacca atttgaataa ctgtacctac atccgttaca gacatttctg
    18661 actcatagtt ttcaatttgt gagcgaagta atgcactaat ttcttcagct tttatggcca
    18721 tctatgtcac tcctccattt aatctaatta atgtactctg ttaaatttct taacgagttg
    18781 atttaaatca ttttgtacac taccgtcata tacttttgta ccgattttca cgcgtacgcc
    18841 accgatcagt tcttcgttta cagtagaatg aatgattaaa tctttaagtc ctgtacgatc
    18901 taacaatgcg tttgtcactt gcattaattc atcttcattt aaagttgaag ctgattcaac
    18961 ataagcatct gccagaccgt ggaattgata atactgcgct tcaaatgctt tgaaaatagc
    19021 aggtattaaa tgtaaattac ggtgtcccgc aacaattttt aacgtattca tcaaataagg
    19081 ttgtgttcct gcaaaaacat tatctacaat atgacgtcta tccgctattg taatttttgg
    19141 ttcataatcg atgcctttta agtaatcgat ttgactttca acagctgtat tgatttctgt
    19201 aaattcatca tatacctcgg ataagatatt gtgtgataat gtaacatcat acagtgcttg
    19261 ggcatatttt tgagcaacgt tagccattac ttatccccta cctctttaac gtacttctct
    19321 attaaagctt tttgatcttg ttcagagatt tctttacgta atacttttga tgcaatcagt
    19381 actgagagtt ccgaaacttg attattaatt tctgctaatg cacgttcttt ttcactctta
    19441 atttcacttt gtgccgtttc aagcatacca ttggcacgtt gatttgcttc atgaaggatt
    19501 tcttcttgtt gacgtcttgc ttgtaacttg gcatcttcaa gaattttatg aacttcatct
    19561 tgtgtttctt taagtttttg tctattttct tcttctaaac gttgcgcatt caattttgca
    19621 cgttctgcat catcaatgtc ttgattaatt gaacgctcac gatcgtccat gactttttta
    19681 agtggtcccc aagcaaactt tctaagtagt gcgagtaaaa tgaggaaagt tactactgtt
    19741 acaataatat ccccaatgtt cacgccacca cctgctgctg caagggtaaa taaattagca
    19801 gtcactatga tgtacactcc tttcaaccat ttcatctgtt caaataataa aaacgaatgg
    19861 cgaaagccta atctgtacta gacctcgccc tgacaaatgt ttttcatatg taaaaataag
    19921 aaattaacaa atgtctttat tacgtcatgc ttcctaactg attagcttcg attaaatgaa
    19981 taatacgatg aatgtgataa ctacaccgat gataggaagt gcctctacta aaccaatacc
    20041 gatgaacata attgacatta attgtgtacg agcttctggt tgacgtgcca caccttcaac
    20101 tgttctagaa acgattaaac cgttaccaat acctgcacct aatgctgata aaccgattgc
    20161 gattgctgct gcgattaaat tcattatata aatcctccta attgttttta aattttaatt
    20221 tttattttaa tggttgtctg ctactttatg tgacatatac accattgata acatgataaa
    20281 gatataggct tggattgagc ctacgaaaat tgaaaaacct tgccaaataa tcaatccagg
    20341 aataccaata ataaaaccaa atgctactgt taaagtcact tttgaaagta accctaataa
    20401 aatctcaccg gcataaatgt taccgtacag acgtagacct aacgtcaatg tcgatgcaaa
    20461 ctcttcaaag acattaatag gaagtagtgc caaatacggt ttactgtagc ctttaagata
    20521 agctttagga cctcgcattt taacaccata gtaatgggtt aaaaggacca tcatcgttgc
    20581 gagtgtcaaa gtcacatgtg catcagcagt tggtgacttc caccatagtg tatgaccgtt
    20641 cacaaactgc aatggaagcc ctagcatatt cgccacaaaa atgaataaaa ttaaagtgac
    20701 ggctaagaag tgaaattgtc caccttttga ccaggccata ttactttcga tgatgccacg
    20761 gacaaagtca aaaacccatt cgatgaagtt ttgtgcgcct tttggtcttt tctggaggtt
    20821 gcgcgtacat aagactgcaa taacaaatac tatcactgct gttactaata acatcataat
    20881 agtagataag ttgaaattaa tatctactcc gagaaaatgc caagtcacca cgggatgttt
    20941 gtgatccatt ctagatttca cctcttttca aaatataatt caatcacgat tccttcttta
    21001 acaaaggacg aaaaaccatt aacacatatg aaaccatcaa tcctatgagc acgccgagta
    21061 tatgtatttg cgcttgaaat agtacccata tgacacatgc caatatagcg acgagatagc
    21121 gccaaccatt cccagttgaa ataggttctg ctgagaaacg ctttgcccgc cataaataat
    21181 attcaaaaat gcacgtattc actatagatg ctattatccc tacgatgagc ccaagtacaa
    21241 tcggttgttg cacgtctaaa gaatagagga ttaatagccc tgctaaaatc gtagcgtaat
    21301 atgttaaaaa cggctgaaac attttataaa aacgattcat attgagcctc ttttctgcct
    21361 taagacacaa ttctgaaagc cgttccatac atacaacttt cataataata tagggcgaaa
    21421 agtgtgtcaa ttgcacaatt aaaagggtca atttttataa attgaattgt cacatatttg
    21481 acacattcgt ccctattaaa atgtcacttt acttgtccac tcgaaatgga gcgggttttt
    21541 gatcgattaa accgtaaaag tatttaatat tttcacaaat acgttgtgac gcttgcccat
    21601 caccatacgg attttgtgcg acactcatcg cttcatacaa cgcttcatca gttaataaag
    21661 ctttagttgc ttcgtaaaca tccgcttctt cagtaccgac gagtcggagt gtccccgctt
    21721 ccacgccttc tggacgctct gttgtatctc ttaatacgag cacaggcttg ccgagtgaag
    21781 gtgcttcttc ttgtacacca cctgaatctg tcaaaataaa gtgcgcttga tgtgcaaagt
    21841 tatgaaaatc aacaacttcg agtggttcaa ttaattcaat acgttcatga ttacttaaat
    21901 gtttataagc aatttcacgt actttaggat ttttatgcat tgggtagacg atgaccgcat
    21961 cttcaaattc ctcaacaatg cgtctagccg ctttaaaaat atgatgcata ggttcaccaa
    22021 tattttcgcg acggtgcgca gtgagtaaga taatacgctt atcttgatga cgttgaatga
    22081 tgtctgattg gtattgtgga tcgacagtcg tatgcatagc gtcaatcgct gtgttacccg
    22141 ttacaacaac cttttcaggg tctttgtttt cttgcaataa gtttgcttgt gcctgttcag
    22201 tcggtgcaaa atgtaaatca gccataatac cggtcatttg acgattcatt tcttctggga
    22261 atggagaata cttattccaa gttcgtaacc cggcttcaac gtggccaatg ctaatctcgt
    22321 tgtaaaatgc agcgagactt cctgcaaaag ttgttgtcgt atctccatgg accaatatca
    22381 tatctggttg tgcctttttg atgacatctt ctaacccgag taatacgcgt gatgtcactt
    22441 ctgataacgt ctgcccctgt ttcatcacgt ttaaatcata atcaggttca attccaaacg
    22501 tatctaatac agaatctaac atttcacggt gttgtgcagt gaccacgact ataggttcta
    22561 atgcttcatc ttttttgagc tgtaaaacga gcggtgccat tttaatcgct tcaggcctag
    22621 taccaaaaat cgtcattatc cttttcatgt caatgcgctc cttgtatgaa ttattttgta
    22681 ccgaatagac ggtctccagc atcgccgaga ccagggatga tataagcatt gtcatctaac
    22741 ttttcatcca atgcggcaat aaaaatatcc acatcttcat gtgctgcttg aagtttttcc
    22801 acgccttctg gagcggcaat taaacacata aagcgaatat gtttcgcgcc tcgctttttc
    22861 aatgagttaa ttgcttcgat cgctgatgca cccgttgcaa gcattgggtc gactacgatg
    22921 atttcgcgtt cttcaatatc ttgtggtagt ttcacaaaat attcgatcgc ttcaagtgtt
    22981 tcagggtcac gatataaacc gacatgacct attcttgctg cagggacaag gtttaaaata
    23041 cctgttgtca taccaagacc cgcgcgtaaa attggaacaa aagcgagctt tttgcctgat
    23101 aagcgtttcg caatcgcttt cgtaacaggt gtttcgattt caacctcttg aagctctaaa
    23161 tcacgtgtca cttcataagc cattaacatg cctacttcat caactaattc acgaaatgct
    23221 tttgtaccag tattcacatc tcgaataaag cttaacttat gttggattaa agggtgatca
    23281 aatacatgta ctttacccat gatattgcct ccgtttgttc taaaataatt ggtttattga
    23341 tataaaggga atttttcagt caacgcttga acacgtgact tcgcatctgc taaaactttc
    23401 tgatcttcat ggtttttaag aacgtcgctt ataatacgac caacctcttc aaaagcattt
    23461 tcatcaaaac cacgtgttgt tgcagctgga gtacctaaac ggataccgct tgtaacaaaa
    23521 ggtttctctt gatcgaatgg aatcgtattt ttgttacatg taataccaat ttcatcaagt
    23581 gcctcttctg ctactttacc tgtaatgcct acagaacctt taacatctac tgatacaaga
    23641 tggttatctg taccaccaga tacaattcta aagccattat cttttaaagt ttttgcaagc
    23701 atttgcgcat ttttaatcac ttgttgttga tacgttttaa attctggttg taatgcttct
    23761 ccaaatgcaa cagctttcgc agcgatcaca tgctcaagtg gaccaccttg aatgccaggg
    23821 aaaattgttt tatcaatctc ttttttatat tcttctttgc ataaaatcat accgccacga
    23881 ggaccacgta acgttttatg cgttgttgtt gtaacgaaat ccgcaaattc aactgggttt
    23941 tggtgaagac ccgctgcaac aagccctgca atatgcgcca tatctaccat taactttgcg
    24001 ccaacttcat cagcaatttc tttaaatttc ttgaagtcga ttgaacgtga ataagcagat
    24061 gcacccgcta cgattaattt aggcttgtgt tcttttgcta acttacgaac ttcttcatag
    24121 tcaatatgct cttcgtcttt agttacacca tattccacaa agttgtagaa cttaccacta
    24181 aagttaactg gtgaaccgtg cgttaagtga ccgccatgac ttaaattcat accgagtact
    24241 gtgtcaccat gttcaagtgc aacaagatat acagccatat tcgcttgtga accagaatgc
    24301 ggttggacat tgacatgttc agcattgaaa agtgcttttg ctctatcaat tgcaagctgt
    24361 tccgtttggt ctacaaatac gcatccccca tagtaacggc gtccaggata accttcagca
    24421 tatttattcg tcatgactga accttgtgct tccatgactg cttcagaaac aaagttctca
    24481 gatgcaatta actcaatgct tgtgttttga cgatgaaact ctttttgaat actttcaaat
    24541 acagacttat cttgtttagc aagaaatgac atagacaatt ccctcttttc tgttaaagtt
    24601 gatatttagc acgttcgccc ccgatttttt tcggtcgaga tgttgctaca gtcacaattg
    24661 cttggccaac ttgtttcact gtagtccgaa caggtactgc cacatgcttc agatgcatac
    24721 caatcaatgt ttgaccgata tcaatacctt tgtcagctcg aatatgttcg actaccatgg
    24781 gtgcttccat atgacgatac gcatgcgttg ataaagaacc cccagcatgc acatctggaa
    24841 cgacagagac ttcagtcatc acgtatggat caaagtcttt acgttcaata gtaatggcac
    24901 gattgatatg ttcacaacct tgaaatgcaa atgaaacacc tgtctcctgt tgaatcttaa
    24961 caagtgcttc gaaaatttcc tgagcgacat ctatcgagcc agtcgtccct atacgctccc
    25021 cttgaacttc agaagtcgaa caacctatga cacatatctc accttcatta aaaaacgatt
    25081 gggctttaag ttcttctaat aattgattta aatcctgcat accgttaccc ccttgttcat
    25141 cggatgagtc aaaaaaacaa taatgaaagg actacgaaac atgctatacg tcctttatta
    25201 taactcattt tttctttaac ttatactgat tatacaatta ttctgtcact aatttagact
    25261 ttaacttgtc gatcatccgt gtcaactgtt caaagacttg ttcatacgtt tcatactgcc
    25321 cgccataagg atcttctact ggcaaatctt catccacata atcgtttaat gcatacacat
    25381 tcacttgcgg gccatacatc gcttgaatca tttggcgatg tgcagtcgtc atcgttaaaa
    25441 tcaaatccgc ttcagcatcc cctgcatcaa acaattgtgc acccttcggt atcggtaatt
    25501 catgacgttg taataattcg cgactatgtg acgatatcgg ttgcccttct tgtgccatca
    25561 gccctcttga aacaatttca aagtctggca ttaattgttt cgcaatactt tcggctaatg
    25621 gactacgaca cgtgttgccc gtacatacaa atacgatttt cataacgact caccctttac
    25681 gacttgttga ctgaccgctt taagcatccg atttctcaac gcttcagtgt caaagttatc
    25741 ttcaaatcca taaatgtatg ccatgtcgac atcattgagt tggtccagtt gatgtaacac
    25801 gtcatataga ttatggtttg caccttgaat atcggattca ctttcactta tgacaatgac
    25861 ttgcgcactt gctggcaaaa actttttctt cgtttcaggg acgataaatg cgattttcga
    25921 ccagtcttca tgtgcgtctt cgtgaatcgg tgcattgagt tgcgttatca ttttaagagg
    25981 cgttgacggc gcataatgac gatatttcat ccctggcgca atcggttttt cagtagctag
    26041 tggactgtga acttcgacag attgtggtaa aatatcattc aacatgttgc gcgttatcgt
    26101 ccctggtcgc gcaatgcgaa atggaaatga tgtacaatct acaactgtac tttcaagtcc
    26161 tgcatcactt tgcgtcgatc gcatgatgcc ctccacccga tgattcaaat catgaaacgc
    26221 atgttcaaac gttgttgggg aaggtcgtcc acttaaattt gcactcggtg ctgcaatcgg
    26281 caaatcgact gcttttaata atgctaatgc tacagggtga ctcggcatac gcactgccac
    26341 agaattcaat ccacctgtca cccgatcaca taaaaatcct tgttttaacg gtaatataaa
    26401 ggtaatcggc cccggccaaa aagcttccat taacttacgt gtcgactccg aaatatctgc
    26461 tacaaaatcg tcaagctgat ccgtatcatg aatgtgcaca attaaagggt tatcggaagg
    26521 acgccctttt gcttcataaa ttttacgaat ggccgtatcg tctttcgcat ttccacctaa
    26581 accgtaaact gtttctgtcg gtagcacgac aagaccgcca tcttgtaaag tttttacaat
    26641 ttctggtaat tttggatatt cttctaatcg tgttgtataa tctcgaacat cccaaatttt
    26701 cgtttctgac attaacgtcc acctctcctt ctcttctatt ttactacaaa aataaaaatg
    26761 ggtgcatgac ttcaatcgta agaatacgtc ttagatttta ctgtcgtgca tccattttta
    26821 attgctgtta tattgacgct cattcgcgaa attttcattg cttcacagac aaagcgacta
    26881 tggctgagtc catttaaaat gaaaaattcg tgcatgaccg ttgatgtcgt ttatgacttc
    26941 tggcgtaata tgcggataca actgttgcat catacgcgtt aactgtgcac cttgttgaaa
    27001 gccaatttca aagacgaccg gcgcaccgtc ttgcatgaca tgaggcaaat cacgtaatat
    27061 tgctgcataa acttgatagc cttcttgggt tgcaaaaaga gccacatgcg gttcatattg
    27121 aatcacactg ttatccatta atgtgcgttc atgctcacca atgtagggtg gattagaaat
    27181 taaaccgtcc aatcgaacgt cctgatcaat caatggctgt aacgcatttc cttgtaaaaa
    27241 ggtgatgtct cgttgcaggc gctgagcatt ttctcgtgcg accgctaacg cttgaaatga
    27301 aatatctgtc gcaataacac gcaattcagg tcgttcagct tttaaagtga tggcaatcgc
    27361 accacttccc acaccaatgt cagcaacaac tttagcagct gccaactgtg ttaaaaaata
    27421 atgcaccact tcttctgtct cgggtctagg aatgaggaca tccgaattca ctttaaattg
    27481 gcgaccgtaa aattccgatt gaccgacaac gtattgcact ggcatccccg tgagcagttg
    27541 tgataaaccg tcattcaatt gtttaagcgt tgattcagcc attggcgtca tttcattcaa
    27601 aatgagtgaa gttctcgacc attgcaacgt atccatcata aaccattgga tggcattcgg
    27661 ctcatatcct ttcaccacca tttgctgctc agcctgttgt cgccactctt tataattcac
    27721 cagtattaag ctctttcaat ttttcagttt gttcatgcat cgttaacgca tccacaattt
    27781 cgtctaactt gccttccata atttggtcta atttttgtaa tgttaaacca atacggtggt
    27841 ccgtcacacg actttgcgga tagttatatg tacggatacg ttcagaacgg tcacctgtac
    27901 ccaccgctga cttacgttgc gctgcatatt tttgttgttc ttcttgcaac ttcatatcat
    27961 acaatcgtgc tttcaacact ttcatcgctt tttcacggtt ttgaatttgc gatttttctg
    28021 aagatgtcgc aatgacccca gttggaatat gagtaatccg tacggcagag tccgttgtat
    28081 taacgtgctg tccacctgca ccacttgaac gatacgtatc gattttcaag tcttcgttgc
    28141 ggatttcgat ttctacatct tctacttctg gtaggactgc aactgtggct gttgacgtat
    28201 gaatacggcc acctgattct gtttcaggaa cacgttgaac acggtgcgca ccattttcat
    28261 atttcaattt actgtaaaca ccgtcgccag aaactgaaaa actgatctct ttataaccac
    28321 cgtggtcact ttctgtcgct tctacaattt caagtttaaa acgatgtgac tcagcgaact
    28381 tagaatacat acggaataaa tcaccagcaa aaatagccgc ttcatcgcca cctgcagccc
    28441 cacgaatttc cacaataaca tctttttcgt cattcggatc ttttggaatg agcaataatt
    28501 ttaactgctc ttctagttct ggcacttctg ctttcaatgc acttgcttct tcttttaaca
    28561 tttccacttc atcagcgtca tctgtttcag caagcattaa ttcaatttcc tcagcatctt
    28621 ctttcacttg tttatattga cggtacactt ctaccgtttt ttgtaattct gattgttctt
    28681 tagaatattt tctaagaaga tttgaatcac tcacaacttc tggatcgctt aacaattcat
    28741 tcagttgttc ataacgttct tcaacaatgt ctaattgatc aaacattatt ccaacgcctc
    28801 cttatcattt tcactcggtg ctacgatatg atgtgcacga caacgcggct cataactttc
    28861 atttgcacct acaagtataa tcggatcatc cacttttgca ggtttaccat caatcaatcg
    28921 ttgcgtacga ctcgatgatg ccccacaaac cgcacagacc gcttgtaatt ttgtaatatg
    28981 ttcactcacc gctagcattt caggaacagg gtgaaaaggt tcgcctttaa aatccatatc
    29041 aagacctgca gtaattacac ggtaccctct ttcggcaagc gtttgtgcaa tgtctacaat
    29101 atctcgatca aaaaattgaa tctcatcaat accgataata tccacaccat ttaagtcatg
    29161 gtgccatatc tcacttgctt tagaaatgtt aatcgcttct atttcattac cgttatgaga
    29221 aacaattttt tctttatggt agcggtcatc aattgttggt ttaaatacaa ccactttttg
    29281 ctttgcatag acacctcggc gtaagcgtct gatgagctct tctgacttgc cactaaacat
    29341 gcttccagta atgcattcta tccaacctga atggtacgct tcatacatga ttctttccac
    29401 ctttttcaaa acaaaatcaa ttcattatat cataaaatat acgtattcgt tgatgtaatt
    29461 cgtatgtata tcaaaattca ttaaattctt gtttatttga tttaaaatcc ccctttaaac
    29521 tttcagaatg tgataaatga ggtaaagccc tagcaaagca gataataaaa aagtgggtac
    29581 acaatctaaa ggtttagatt ccgttgaccc actacaacgc acaacacgtt tccttatgat
    29641 acagtatcaa agaaaacgtg ttgacgtaca ttttattcac atttcattaa gcatacagtt
    29701 tgagaggaca gctatccacc caagccaatg ttgtcttagt tgtctgattt gagaccaaat
    29761 tttttgttga aacgttccac acgaccatct gccgcagcaa atttttgacg tcctgtgtag
    29821 aatggatgtg aatcagaaga aatatctaaa cgaataactg ggtactcgtt accatcttcc
    29881 cattccattg tttcgttaga aaatttagta gaaccgctta aaaatttgta atcagttgtc
    29941 gtatctaaaa agatgacttt acggtattct ggatgaatcc cttgtttcat aattttcagc
    30001 tcctttgccc tgaaccatcc ggaacagagt tatttctgag tttttaccca atacttaaac
    30061 attatatagg ccgcatgatg aaattgcaac cctacatcta aaattattct gattaaataa
    30121 tcggtttacc tgttttacta ctttcagccg cactttgttg taaaagttca aagaattcag
    30181 cattggattt cgttttcttc aacttacgaa tgaaacgctc tgtgaagtca ggtgaatttg
    30241 aaaacatatt gcgtaattgc cacaagctat ccaattcgtt tttcggaaca aggagttctt
    30301 ctttacgcgt cgaacttcta gaaatatcaa tcgctggata aatacgacgt tcagaaaggc
    30361 gtcgatctaa atggagctcc atattccctg tccctttaaa ttcctcataa atcatatcat
    30421 ccatacgaga acctgtatca acgagcgtag tggctaaaat tgttaaactg ccacctgctt
    30481 cgatatttct ggcagcacca aaaaatgttt taggaccatg taatgacgct ggatctaaac
    30541 cacccgataa tgtacgacca ctcggcggta caacgaggtt atacgcacgg gctaaacgag
    30601 tcagtgaatc cattaaaata atgacatctt caccaatttc gacgagacgc tttgcacgct
    30661 cgagcaacaa ttcagcaact tttacgtgat gttttggatg ctcatcaaac gtagaatgta
    30721 ctacttctgc ttcatcaact gaacgttcaa tgtcagttac ctcttctggt cgttcaccga
    30781 tgagtaaaat gaaaagttta gcattcggtt tgttcgtaac aatcgcattg gcaatttctt
    30841 ttagtaaagt ggttttccct gctttaggtg gtgcaacaat taagccgcgt tgtcctaaac
    30901 caataggtgt aattaagtcc attacacgtg ttgaatagtt tcgaggttct gtttctaatt
    30961 taatccgttc atctggatat aaaggtgtaa gagcttggaa gtgagggcgt tttttgactt
    31021 cttctgcatt gtgatcgttc acaaagtcaa cttgtagtaa tccataatat ttttcgtttt
    31081 ctttcggttt tcgaactttt ccggttactt tatcgcctaa tttaatttcg aatcgacgaa
    31141 tttggctagc agaaatgtag atatcttttt cacctttgga gaagttaacc gttcgtaaaa
    31201 acccataacc atcttgttgg atatcatcga ggataccttc catatagtag tttccatctt
    31261 gttccatttg cgcttccatg attgcaagta cgagttcttt tttatttaat ttactatagt
    31321 taacaagttt aagagatttt gccttttcag tgagggcctt tgttgtataa ttcttgtata
    31381 attcatgaaa agattcatat tgcggagatg ttcgttccct tgacatgtta aacactcatt
    31441 tcattttaaa ttctatttaa tcgcaaatgt tacgattaaa ccttactata tcaaataatg
    31501 ggctcaatga caaaatatca atggaaatga caggaaaaat tcagatttga tacatcatca
    31561 ttttttcaat atctgtcatc aattttactc atttttataa gttcagaaaa tcatagaaaa
    31621 ttggcttgtc cataaaataa agagatc
//
LOCUS       DANHPA010000014        29481 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.014, whole genome shotgun sequence.
ACCESSION   DANHPA010000014 DANHPA010000000
VERSION     DANHPA010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 29481)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29481)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29481
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.014"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            11..184
                     /locus_tag="PTC28_000541"
     CDS             11..184
                     /locus_tag="PTC28_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715859.1"
                     /translation="MWNFIKGLFKFLFVSTLVITGVVGVGLAVLTYVFKKDFEEIESK
                     TKEIIADIEANQG"
     gene            403..1452
                     /locus_tag="PTC28_000542"
     CDS             403..1452
                     /locus_tag="PTC28_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactonase family protein"
                     /protein_id="HDK5715860.1"
                     /translation="MVKGYIGSYTKKDGKGIYRFELDEQAGRIETVETGYELNASTYL
                     VQHEDTLIGITKNDKNAGLATFKIKQDGSLEKTGESLESFKGSGCYVVVSPDGKYVFE
                     AVYGDGVARIYELDAANNRITRLIEEVIHEYPHGPNVDRQEQSHVHYLDVTPEHKYVV
                     AVDLGADLLVTYHYGDQGLEVAHRTALEPGDGPRHIAYHKTGRYAYVVNELSNTVVVM
                     AYEDGSFTELERHLTIPEDFLLPTKLAAVRLSHDQRFLYVSNRGHDSIAIFKLLEDGA
                     KLELVDIVSSGGAFPRDFNITEDDAYLVAAHQEENSEVVVFKRDLDTGRLTKTDDQQT
                     APEGVCVKFLDETHL"
     gene            complement(1564..2943)
                     /locus_tag="PTC28_000543"
     CDS             complement(1564..2943)
                     /locus_tag="PTC28_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HDK5715861.1"
                     /translation="MNPFHTQFNATQRYFQSHATRSLKSRKKALKQLAKQIKLHEQEI
                     FDALKQDLNKNEVEAFGTEIGYTLNNIRYMRKNLSKWAKSQAVDTPFFLFPAKSFIVN
                     EPLGTVLIIGPFNYPFQLIFEPLIGAIAAGNTAIVKPSELTPNVAAVIEKIITETFDP
                     EYVAVAQGGAETIQSLLELPFDHIFFTGSQKVGKIVYEAAAKQLIPVTLELGGKSPTI
                     IDRTANLKVASERICFGKFMNAGQTCVAPDYVLIDETIKADFIEALTTTIREFYGTHP
                     IDSEDLGRIVNDRHFNRLAQLLTAHQSNIIVGGKTAAEQRYIAPTLLDRVQADDPIMQ
                     EEIFGPILPILTYRDFDEAIAYVQSKPKPLSLYLFSEDENATTRVLNELSFGSGAIND
                     TILQLANPKLPFGGVGASGIGRYHGKYSFETFSHQKPYIFKTTKLETGLLFPPYKGKL
                     GYMKKLFKK"
     gene            complement(3213..3494)
                     /locus_tag="PTC28_000544"
     CDS             complement(3213..3494)
                     /locus_tag="PTC28_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDK5715862.1"
                     /translation="MSENVKAGHHKFYYGETENRPDAQILFSYYDTNVIDVYSTYVSP
                     SLRGGGVAKQLFDAVIEKAKNENLKIIPSCSYVAHQFERDASLAPYRAE"
     gene            complement(3524..4450)
                     /locus_tag="PTC28_000545"
     CDS             complement(3524..4450)
                     /locus_tag="PTC28_000545"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese-dependent inorganic pyrophosphatase"
                     /protein_id="HDK5715863.1"
                     /translation="MMTTYIFGHQNPDTDAISSAIIMADFEQQHGNKEAKAFRIGELG
                     PETQYALDYFNVEVPEFLTDDLTGQDVILVDHNEFQQSAHNIEKANIRHVIDHHRIAN
                     FETAGPLYYRSEPVGCTATILYKMYNERNYEIRPEIAGLMVSAIISDSLLFKSPTCTQ
                     QDIDAAQALAKIANVDLQTYGLEMLKAGASTTNKTEDELLNTDAKSFSMGDYTVRIAQ
                     VNSVDVEEVFARQEALENAMNKASAENSYDTFILVVTDIINSDSKILVVGAEQEKIAQ
                     AFNTTLDNHTAFLPGVVSRKKQIVPPITEALS"
     gene            complement(4507..5058)
                     /locus_tag="PTC28_000546"
     CDS             complement(4507..5058)
                     /locus_tag="PTC28_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017464994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HDK5715864.1"
                     /translation="MSNKALVVVDYSYDFVADDGKLTCGAAGQAIEPYVVERIKAYHE
                     AQENIFFMMDLHFEDDPYHPETKCFPPHNIKGTKGRELYGEVKALYDMIKDSAHVYFI
                     DKRRYDSFYGTPLDSMLRERQVDTIEIVGVCTDICVLHTAISAYNLNYQLIIPKKGVA
                     TFNEAGHQWALTHFKTTLGAQVE"
     gene            5139..6245
                     /locus_tag="PTC28_000547"
     CDS             5139..6245
                     /locus_tag="PTC28_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pectate lyase"
                     /protein_id="HDK5715865.1"
                     /translation="MKINVLDFGAKGQNRLLDTWGIQRALNQAQKGPITVYIPSGTYH
                     IAKALKIYEGTTLILDPDAQMLRTGKDALLKNGTSLKRYYGYNGNSHIKIQGGIWNMN
                     GVLYPYNNTAMCLGHAQEIEVCHLTIKNVVGGHGIDACGLDGLHVHHCNFVGFYDVTG
                     ERWFSEAVQLDLFVEGAFPKFGVNDGTITKNAVIEHCYFGNSFEGDMQSWNRAIGSHA
                     TRFDRFYENIIIQHNVFEDTQDYALTPLKGKNIFIQHNLFLNCTGGIRYLGVHQGKNA
                     VTLEGNHEGKQGGDGLYVMHNDFVNNGAKDVLHIRSHQDAPHTDVNVIGNTFMGGHQV
                     AQLTGVHDIAILNNEHSPQWNQKHVTAFITDKSE"
     gene            complement(6298..7101)
                     /locus_tag="PTC28_000548"
     CDS             complement(6298..7101)
                     /locus_tag="PTC28_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HDK5715866.1"
                     /translation="MTLFYLGPKGTFSYLAALKLQSQTNQKEQLVERSNLYEVMSSLQ
                     KDPSASAIVPIENSIEGTINVIADSLIEQNFVIIEEIFLDIAFALYGLPNQSFKDIQR
                     VYSISPAISQTQKFIHEQQFDYDYTTSTVASLEKIDATTGAIAPLGSGEMYGYEALAT
                     HIEDYPHNMTRFLVLKHASEVTNQSGSECLLVITPTEDKPGLLASILNTFAMFQVNLK
                     WIESRPLKTQLGMYRFFVQAECPDTTVLNKILTILETLDFKIKNLGRFH"
     gene            complement(7145..8215)
                     /locus_tag="PTC28_000549"
     CDS             complement(7145..8215)
                     /locus_tag="PTC28_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide synthase oxygenase"
                     /protein_id="HDK5715867.1"
                     /translation="MLKEAQAFIKQMYDELDLSTTERDARLAEIEQAIHTTGTYQHTT
                     DELTYGARVAWRHSNRCIGRLFWESLKVIDARDIKEETPFLESIESHIKTATNDGRIK
                     PCITIYAQSDEEGPQIWNNQLIRYAGYDDKGDPSEKSITKLAQHLGWTGAHTDFDVLP
                     LIYQLPNQPVKYFDYPSDWIMEVPITHDQFPNVSALNLKWYAVPIISNMDLKIGGITY
                     PTAPFNGWYMVTEIAVRNFTDTYRYNLLETFATAMGYTDLRNATFNKDRVLVEINDAV
                     LQSFKKAGVSMVDHLTASKQFEKFETAEARKGRTVTGKWSWLAPPLSPTLTTNYHHGF
                     SNETRQPNFFYKKNTSTGCPFH"
     gene            8847..10322
                     /locus_tag="PTC28_000550"
     CDS             8847..10322
                     /locus_tag="PTC28_000550"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500623.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HDK5715868.1"
                     /translation="MYQYKDDSFMLHNDLYQINMAESYWFDGIHERKAVFDLYFRNMP
                     FGSGYAVFNGLQRVIQLIQNLHFSVTDIEYLKSIGYQDDFLNYLADLKFTGNIRSMKE
                     GELCFNNEPLMRIEAPLIQAQLIETALLNIINFQTLISTKASIIKQVAVDDVLMEFGT
                     RRAHEFDAALWGARAAIIGGFDSTSNVRAGKLFNIPVSGTHAHAFVQTYGDEYTAFKK
                     YAERHRNCVFLVDTFHTLKSGVPNAIRVAKELGDRINFIGIRLDSGDIAYLSKKARQM
                     LDEAGFKDAKIIASNDLDEQTISSLKAQGAAVDSWGVGTKLITAYQQPALGAVYKLVA
                     VENNEGKLVDRIKLSNNAEKVTTPGKKKVYRIINTKTNKSEGDYITLEHEDPNEEKVL
                     KMFHPIHTYKMKRIKNFKAVDLHHDIFKDGQLVYDCPTEMEAKAYLKSNLEYLWEENK
                     RYLNPEEYPVDLSTLCWENKQKRIFEVAENVKEMEEKYDHE"
     gene            10315..11145
                     /gene="nadE"
                     /locus_tag="PTC28_000551"
     CDS             10315..11145
                     /gene="nadE"
                     /locus_tag="PTC28_000551"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002464730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-dependent NAD(+) synthetase"
                     /protein_id="HDK5715869.1"
                     /translation="MSEMQAMIVEEMKVKPSIDSAETIKEMQHFIEQYLHAHTFVKTL
                     VLGISGGQDSTLAGKLVQLAVENMRNASGRDVQFIAVKLPYGVQKDADEVEDALNFIQ
                     PDRIVTVNIKPAVDQSVQSLQEAGIALSDFHKGNEKARERMKVQYAIAANTSGIVVGT
                     DHSAENITGFFTKHGDGAADIAPLFGLNKRQGRQLLQYLGAPAHLYEKIPTADLEDDK
                     PQLPDEEALGVTYEAIDNYLEGKGVSPEDAAVIERHYVRNAHKRELAYTRFSWPKSDK
                     "
     gene            11207..11776
                     /locus_tag="PTC28_000552"
     CDS             11207..11776
                     /locus_tag="PTC28_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2179 domain-containing protein"
                     /protein_id="HDK5715870.1"
                     /translation="MSLINDNPWLMLIAIFVINVAYVTALTMRVILTLKGYRYVAALV
                     SFVEVFVYIIGLGLVMSSLDQFQNIIAYALGFSVGIIVGMKIEEKLALGYSVVNVTTA
                     DYELDLPRQLRALGYGVTHFGAHGRDGDRLVMQILTPRRYELKLMDTIKQLDPKAFII
                     AYEPRNIHGGFWVKGVRSKKVKAYDTDEI"
     gene            11766..11954
                     /locus_tag="PTC28_000553"
     CDS             11766..11954
                     /locus_tag="PTC28_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NETI motif-containing protein"
                     /protein_id="HDK5715871.1"
                     /translation="MKFKVEPDETIQDCLARMKAAGYMPVKRFEKPVFIENEHGDIEV
                     LRQEIEFTGKKIPDAFES"
     gene            12376..13671
                     /gene="purB"
                     /locus_tag="PTC28_000554"
     CDS             12376..13671
                     /gene="purB"
                     /locus_tag="PTC28_000554"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDK5715872.1"
                     /translation="MIERYSREEMAQIWTDQNRYEAWLEVEILASEAWSELGYIPKED
                     VKKIRQHARVDVDRAKEIELETRHDVVAFTRQVSETLGEERKWVHYGLTSTDVVDTAL
                     SYQIKQANDILEQDIQRFIDVLAAKAKKYKTTLMMGRTHGVHAEPTTFGLKMALWYAE
                     MQRNMERFKNVRTEIEVGKMSGAVGTFANIPPEIEAYVCKHLGIGTAPISTQTLQRDR
                     HAYYIATLSLIATSLEKFAVEVRNLQKTETREVEEAFAKGQKGSSAMPHKRNPIGSEN
                     ITGIARVIRGYLTTAYENVALWHERDISHSSAERIMLPDVTIALDYALNRFTNIIDRL
                     TVYEENMTENMNKTFGLIYSQRVLLALIDKGMVREEAYDTVQPKAMESWQTKTPFREL
                     VEADTKITDKLSKEELDACFDPRHHLNQVDTIFKRVGLE"
     gene            13739..14041
                     /locus_tag="PTC28_000555"
     CDS             13739..14041
                     /locus_tag="PTC28_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715873.1"
                     /translation="MQIEKLRGKALDELFDAVLTLETREECYQFFDDLCTVNELQSLS
                     QRLQVAKMIKQGYTYATIEKESGASTATISRVKRSLQWGNDAYTMILDRMNIETKL"
     gene            14718..15407
                     /locus_tag="PTC28_000556"
     CDS             14718..15407
                     /locus_tag="PTC28_000556"
                     /EC_number="2.5.1.n9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heptaprenylglyceryl phosphate synthase"
                     /protein_id="HDK5715874.1"
                     /translation="MYDIKEWRHIFKLDLAKEISDADLEQICMSNTDAIMIGGTDDVT
                     EDNVIHLMSRVRRYPLPLALEISNLESTMPGFDFYFVPTVLNSTDVTYHNGLLHSALK
                     VYGHMIDFDEMVFEGYVVLNPESKVATKTSAQATLDESDVVAYAQMAESFYRLPVLYL
                     EYSGQYGNPEIVRAAKQSLNHTHLFYGGGIDGVDKAMEMAQIADTIIVGNVIYEDLKA
                     ALKTTKIKERT"
     gene            15407..17602
                     /gene="pcrA"
                     /locus_tag="PTC28_000557"
     CDS             15407..17602
                     /gene="pcrA"
                     /locus_tag="PTC28_000557"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase PcrA"
                     /protein_id="HDK5715875.1"
                     /translation="MNPLVANMNKEQSEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYL
                     LDEKDVSPYNILAITFTNKAAKEMKERVQALVGEEAEVIWMSTFHSMCVRILRRDADR
                     IGIERNFTIIDPTDQKSVIKDVLKRENIDPKKYEPRIFIGEISKLKNDLLTPAKAEAE
                     ADDFYSRMVATVYKGYQQQLVRNQALDFDDLIMTTIRLFERVPDVLDFYQNKFQYIHV
                     DEYQDTNTAQYTLVNMLAQKFKNLCVVGDSDQSIYGWRGANIHNILSFEKDYPNARTI
                     FLEQNYRSTKTILQAANEVIRHNTERKPKGLWTANQQGEKIHYYEAMSERDETEYVVR
                     EIFKQQKKGKRYKDMAVLYRTNAQSRVLEETFLKSNIPYVMVGGQKFYDRKEIKDLLS
                     YLRLIANSADDISLQRIINVPKRGIGPSSVEKIATYAVDHELTMFDALAEVDFIGLSK
                     KVTQAAAEFYQLMSNLMQEQEFLEVSEIVDEVLEKSGYREMLEREQSIESRSRLENID
                     EFMSVPVDYEKNTPLEEQSLINFLTDLSLVADVDGANLEDGVTLMTMHSAKGLEFPTV
                     FIIGMEESIFPHIRAIQSESDHEMEEERRISYVAITRAEEELYLSHATSRTLFGRPQS
                     NARSRFLNEIPEELLDLPERQYATTIGSRKRQPAKRGFSQRAVKNSASSSTASNWKVG
                     DKVMHKSWGEGMVSNVNDKNGSIELDIIFKSEGPKRLLAQFAPIEKKED"
     gene            17606..19609
                     /gene="ligA"
                     /locus_tag="PTC28_000558"
     CDS             17606..19609
                     /gene="ligA"
                     /locus_tag="PTC28_000558"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HDK5715876.1"
                     /translation="MSSIAQRVEILHKLLHQYNYEYHVQDNPSVPDSEYDKLLHELID
                     IETKHPELKTSDSPTVRVGGEAQSSFEKVNHDTPMLSLSNAFNEADLRKFDQRVRDAV
                     GEVEYMCELKIDGLAVSLKYVDGKLVQGLTRGDGTTGEDITENLKTIYAIPLTLDKKI
                     SFEVRGEAYMPRQSFLKLNEAKAARDEQPFANPRNAAAGSLRQLDSKLAAARKLDIFL
                     YSINDFTELDASSQSEALDELDELGFKTNHEREKVKTIDEVLEYIKKWTNQREQLPYD
                     IDGIVIKVNHLEHQEEMGFTQKSPRWAIAYKFPAEEVITELLDIELSIGRTGVVTPTA
                     ILEPVRVAGTTVSRASLHNEDLIHEKDIRIGDSVVIKKAGDIIPEVVRVILDRRPEGA
                     ETYHMPTHCPSCDHELVRIEGEVALRCINPKCQAQLVEGLIHFVSRQAMNIDGLGTKI
                     IEQLYTHALIKDVADIFYLTKEDLLPLERMGEKKAQKLIDAIETSKARSLENLLFGLG
                     IRHLGVKASQVLAEKYETMDRLLTVTEDELVEIYDVGEKLAQSLVTYLENEDIRALIE
                     KLQSKGVNMTFKGQKLSQIEGHPEFAGKTIVLTGKLQQMTRNEATNWLKLQGAKVTST
                     VTKSTDLVIAGEDAGSKLTKAQSLGTMIWTEQDFIDKQNEINE"
     gene            19621..20826
                     /locus_tag="PTC28_000559"
     CDS             19621..20826
                     /locus_tag="PTC28_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CamS family sex pheromone protein"
                     /protein_id="HDK5715877.1"
                     /translation="MKKSIVLLLGLSLVLSACGPDEDESKSSKEKTEAQQRDHNKVKE
                     IATDKNVQGTDYRTILPFKESQARGLIQENMANSYNGEDFEDGLLNISKEVYPTDEYL
                     YQDGQYLDKDTIRAYLRPKYTKKELDKMSDKEKENKNATANLGLNPSVNGETDEEKIA
                     KKSPAYLSNILEQDFYDNGDTKGKDIEGMTIGLAMNSVYYYQKEKYGETYHEKLDEKE
                     IKKQGRQMAEEMLVRLRENDDLKDIPITFAIYIQSAQEDIIPGRFVSYATAEKKGSKL
                     SDWHQIDQKTVLLPSSEASDLNENLNANFKDFNSALQSYFSNFTQAVGKAEFKNKKVQ
                     NLTVDLPIDYYGKAELIGITQYVTQLAEKDFKSVDQYEIHIKDGSQPRALIRKTKEEK
                     SPQVHIYQN"
     gene            complement(21215..22768)
                     /gene="putP"
                     /locus_tag="PTC28_000560"
     CDS             complement(21215..22768)
                     /gene="putP"
                     /locus_tag="PTC28_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HDK5715878.1"
                     /translation="MVLFGSTLSNQVNLDWQTYIMIAIYFIILLGIGYYGYKQATSNL
                     SEYMLGGRNIGPWVTALSAGASDMSGWMIMGLPGEVYSTGLSAVWITIGLTLGAYINY
                     LVVAPRLRAHTEIAGDAITLPDFFKNRLDDQSNLIKIISGLIIVVFFTLYTHAGLVSG
                     GKLFDSAFGLDYHVGLILIAVIVILYTFFGGYLAVSITDFFQGVIMLVAMVMVPIVVM
                     LKLNGLDTFHTIAEMKPTNLDLFKGTTVIGIISFFAWGLGYFGQPHILVRFMSIRTVK
                     LFPLTRRIGIAWMIVGLLGAVLVGLLGIAFVPAQGVHIQDPETLFILMSQLLFHPLVG
                     GFLLAAILAAIMSTISSQLLVTSSSLTEDFYKLIRGDKANAAAHEKEFVLVGRISVMI
                     VAVAAIAIAWTPNNTILNLVGNAWAGFGAAFGPLVILSLYWKGLSRTGAISGMVAGAL
                     TVILWIVFAHPYGDVNDFFNLYEIVPGFIVSLVVTILVSNMTQKPGAFVEDDLNQVVK
                     QLNDAKLKN"
     gene            23123..23425
                     /gene="gatC"
                     /locus_tag="PTC28_000561"
     CDS             23123..23425
                     /gene="gatC"
                     /locus_tag="PTC28_000561"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HDK5715879.1"
                     /translation="MAEITKKQVEHIANLARLNVTEEDTADMQQTLEGILNFCHQIDS
                     VDTEQVKPTNHVLDLQNVLRDDVAVTGLPQEKALTNAKEVEAGQFKVPAVMNREDA"
     gene            23428..24888
                     /gene="gatA"
                     /locus_tag="PTC28_000562"
     CDS             23428..24888
                     /gene="gatA"
                     /locus_tag="PTC28_000562"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HDK5715880.1"
                     /translation="MSIRYESIENLQKMIKDNQIKPSEIVKDIYDAIEETDPTIQSFL
                     ALDKENAMKKAEELDTLQAKGEMEGKLFGIPMGIKDNIITEGLETTCASRMLEGFVPI
                     YEATVMKKLHNENGILIGKVNLDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAA
                     AVAAGLVPFTLGTDTGGSIRQPAAYCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITR
                     NVKDNALVLEAIAGEDEMDSTSAPDVATDFTADIGKDIKDMKIALPKEYIGEGVDEEV
                     KEAVLKAAETLKSLGAIVEEVSLPRTAYGIPSYYVIASAEASSNLARFDGIRYGYHSK
                     EAQTLEELYKLSRSEGFGKEVKRRILLGTYVLSSGYYDAYYKKAQKVRTLIKNDFENV
                     FKDYDVILGPTTPTVAFDLGAEINDPLTMYANDLLTTPVNLAGLPGISVPCGLAENGR
                     PIGLQLIGKPFDEKTLYRVAHQYETQFNLHDQYQKL"
     gene            24902..26329
                     /gene="gatB"
                     /locus_tag="PTC28_000563"
     CDS             24902..26329
                     /gene="gatB"
                     /locus_tag="PTC28_000563"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HDK5715881.1"
                     /translation="MHFETIIGLEVHVELKTDSKMFSNAPVAYGAEPNTNTSVIDLAY
                     PGVLPTVNRRAVDWSMRAAMALNMEIATESKFDRKNYFYPDNPKAYQISQLDQPIGEN
                     GYIDIEVNGETKRIGITRLHMEEDAGKSTHKDGYSLVDLNRQGTPLIEIVSEPDIRSP
                     EEAYAYLEKLRSIIQYTGVSDGKMEEGSLRCDANVSLRPYGQKEFGTKAELKNLNSFN
                     NVRKGLEYEVKRQEEELLNGGEILQETRRFDESTGKTILMRVKEASDDYRYFPEPDIV
                     PLYIDEAWKARVRESIPELPDARKEKYVKEFGLPAYDAHVLTLTKEMSDFFEAAVEEG
                     ADVKMISNWLMGGVNEYLNKNQIELQDTGLTPANLAGMIKLIEDGTMSSKIAKKVFPE
                     LAQNGGDAKQIMKDKGLVQISDEGAVLEFVQQAIAENPQSVEDYKNGKGKAMGFLVGQ
                     IMKLSKGQANPQLANQLLKQELDKQ"
     gene            27007..27939
                     /locus_tag="PTC28_000564"
     CDS             27007..27939
                     /locus_tag="PTC28_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HDK5715882.1"
                     /translation="MRKRARIIYNPTSGKEVFKRALPDVLIKMEQAGYETSAYATQKV
                     GDATEEAARAIEAQYDLLIVAGGDGTLNEVVNGIAEKPNRPKLGLIPMGTVNDFGRAL
                     HLPTDIFEAVDVILDGKTVQVDIGKMNSRYFINLAGGGKITEVSYEAPSRLKSIVGPF
                     AYYIKGFEMLPQMHAVDVRIEFDSQVFEGEIMLFLLGLTNSMAGFEKLVPDAKLDDGM
                     FTLLIVEKANIAELGHIMTLASRGEHIKHPKVHYHKAQSVNISSFSDMPLNVDGEYGG
                     QLPANFLNLVRHIEVFSPAQEDNALLIDEPTQSE"
     gene            28111..29475
                     /gene="rlmD"
                     /locus_tag="PTC28_000565"
     CDS             28111..29475
                     /gene="rlmD"
                     /locus_tag="PTC28_000565"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HDK5715883.1"
                     /translation="MVLVKKNEVYEGKVVDLTHEGHGVIKQDRYPIFIPQTLIDEEVQ
                     YKVIKVKKNFAIGKLMNVKTASPDRVTPPCDYYQQCGGCQLQHLSYRAQLEMKRKQVI
                     NLFHHKGKMTEVPIHDTIGMDDPWRYRNKSQIPVGTNRNGQIQMGFYRQRSHDIIDMD
                     HCLIQNDDQNDMMNVIKSLLEKYHIPAYNEHIHQGLVRHVVIRKGYYTNEVMVIFVLN
                     GKKLPHHNDIVTALTSQFPQIVSIKLNFQTNKTNVIMGHTSKTIFGKDIIEDTLDDLT
                     FEIGDLSFYQINVTQTQKLYRQALQYANLTGNEVVLDAYCGIGTISLFMAPHAQHVYG
                     VEVVPEAIEDAKRNARYNQLNNTTFVAGAAEDVILKWQQDGIQPDVVTVDPPRKGCDA
                     TFIETLNALAPKRIVYVSCNPSTQLRDIEMLSAQYELKEMTPVDMFPHTTHVETVALL
                     VRKY"
BASE COUNT         9727 a         5012 c         6190 g         8552 t
ORIGIN      
        1 gtgaagagtt atgtggaatt tcattaaggg attatttaaa tttttattcg tttcaacact
       61 agtgattact ggcgttgtag gtgttggttt agcagtgttg acatatgtat ttaaaaaaga
      121 ctttgaagaa atcgaaagca aaacgaaaga aattattgct gatatcgaag cgaaccaagg
      181 ttaaaagtaa cattcgcttt taaaaagata aaagcgtctt ttgaagcgta accattttta
      241 tgattttgag aactgagagc ggggatatga agtctatgag aggattagat ttcaatctcg
      301 ctttttttat tgtcaaggtg aagcgagata tgaaacgttt ctcgtgtgtc tcatcatcaa
      361 aatttggtaa aataggcgta agaaaatgga gggatgcatg ccatggtaaa aggttatatt
      421 ggttcttata caaaaaaaga cggtaaagga atttatcgct ttgaattaga tgaacaagca
      481 ggacgtattg aaacggttga aacaggatac gaattgaatg cctcaacata tcttgtccaa
      541 catgaagata cattaatcgg aattacgaaa aatgataaaa acgctggttt agccacattt
      601 aaaattaaac aagatggtag ccttgaaaaa acaggggaat cattggagtc ctttaaaggt
      661 tcgggctgtt atgtcgtagt atcaccagat ggaaagtatg tttttgaagc ggtttatggt
      721 gatggggtgg cccgtattta tgaacttgat gctgcaaata accgcattac ccgcttaata
      781 gaagaagtga ttcacgaata cccacatggt cctaatgtag acagacaaga acagtcacat
      841 gtgcattatt tagatgtcac acctgagcac aaatatgtgg ttgctgttga tttaggtgct
      901 gacttactcg tgacatatca ttatggtgac caaggcttag aagtagcaca cagaacagca
      961 ttggaaccag gtgacggacc tagacacatt gcttatcata aaactggacg ttatgcttac
     1021 gtcgttaatg aattgtcaaa tactgttgtg gtgatggcat atgaagatgg tagttttacg
     1081 gaattagagc gtcacttaac gattcctgaa gattttctgt tacctacaaa gttagctgcg
     1141 gtccgtttat cacatgatca acgtttctta tatgtaagta accgtggaca cgacagtatt
     1201 gctatcttta aattattaga agacggtgcc aaacttgaat tagtcgacat cgtttcaagt
     1261 ggtggcgcat tcccaagaga ttttaatatt acagaagatg atgcttacct tgtagcggcg
     1321 catcaagaag aaaattcaga agtggtcgta tttaaacgtg atctcgatac aggtcgatta
     1381 actaaaacag acgatcaaca aacagctcca gaaggcgttt gtgtgaagtt tttggacgaa
     1441 acacacttat aatcataatc atatagaaaa ataatgaaaa ggctcaggca tttttaaata
     1501 attgcccaag ccttttcttt tgagttaaag tttgacataa ttgaagggga aaaatagata
     1561 cctttatttc ttaaacagct ttttcatgta gccgagtttc cctttatacg gcggaaacaa
     1621 taagcctgtt tctaactttg tcgttttgaa aatgtatggt ttttgatgtg aaaatgtttc
     1681 gaatgaatat ttgccatgat aacggccaat acctgaagcg ccaaccccgc caaaaggaag
     1741 cttgggattg gccaattgta aaatcgtatc gttaatcgca ccactgccaa atgacagttc
     1801 attcaaaacg cgtgttgtgg cattttcatc ttcactgaat aagtaaagcg ataatggctt
     1861 tggtttcgat tggacatatg cgatagcttc gtcaaaatca cggtatgtca aaatcggtaa
     1921 aataggtccg aaaatttcct cttgcattat cgggtcatcc gcttgaacac gatcgagtaa
     1981 cgttggcgca atgtatcgtt gctctgctgc tgttttgcca ccgacaatga tgttcgattg
     2041 atgtgctgtt agaagttgtg ctaaacggtt aaagtgacga tcatttacaa tacgacctaa
     2101 atcttcactg tcaatcgggt gggtaccata aaattcacga atcgttgtag ttagtgcttc
     2161 aataaaatca gccttaatcg tttcatcaat aaggacataa tccggcgcga cacacgtttg
     2221 accggcattc ataaatttac caaaacagat tcgttcactt gcgactttta agttggcagt
     2281 tctatcaata atggtaggtg acttgccgcc gagttcgagt gtcacaggaa tcagttgttt
     2341 tgccgctgct tcgtatacga ttttgccgac cttttgactg cctgtgaaga aaatgtgatc
     2401 aaatggcagt tccaataaag attgaatcgt ttcggcacca ccttgagcga cagcaacata
     2461 ttctgggtca aatgtctctg taataatttt ttcaatgaca gcagcaacat ttggcgttag
     2521 ttcggatggc ttcacaatgg ctgtgttacc tgcagcgatg gccccaatta aaggttcaaa
     2581 aattaattga aatgggtaat taaaaggtcc gataattaaa actgtgccta aaggttcgtt
     2641 gacaataaag cttttggctg gaaaaagaaa aaagggtgtg tcgaccgctt gcgattttgc
     2701 ccattttgat aggtttttac gcatatagcg aatgttattt aacgtataac ctatttctgt
     2761 gccaaatgct tcaacttcat ttttatttaa atcttgtttg agtgcatcga aaatctcttg
     2821 ttcatgcagt ttaatttgtt tagctaactg ttttaaagct tttttacgtg atttgagcga
     2881 acgtgttgca tgtgattgaa aataacgttg tgttgcattg aattgtgtgt gaaatggatt
     2941 caataggaaa tgctcctttc aaataatcaa atgactttga tcagttcaaa tagggtaaag
     3001 tcagttgatg ttgcatttat tgctatcgta catgtaacgc ttcattatgt atgattgtaa
     3061 catactcagt taaaattcat acgcaatagg atacttgtat tgcaatcata ttcaaaaaca
     3121 gtttaaatac aatcttaaat tgacggtatc gcgattgtgg tcaaaaaaga atcgagacac
     3181 gttggattgt gcctcgactt caagtcatct ttttattccg ctcgatatgg tgcgagtgat
     3241 gcatcacgtt cgaattgatg cgcaacataa ctgcaagatg gaataatttt taaattttca
     3301 tttttcgctt tttcaatgac agcatcaaac aattgttttg caacaccgcc accgcgtaaa
     3361 gaaggactga cataagtact ataaacatcg atcacatttg tatcatagta agaaaataga
     3421 atttgtgcgt cgggtctatt ttcagtttca ccgtaataga atttatgatg tcctgctttc
     3481 acattttcag acatgttatc acacctttgt ttatattttt aaattatgat aatgcttctg
     3541 taatcggtgg tacaatttgt tttttacgag aaacaacgcc tggcaaaaat gctgtgtgat
     3601 tgtctaaggt tgtgttgaat gcttgagcaa ttttctcttg ttctgcacca acaacaagaa
     3661 tttttgagtc gctattaata atgtctgtaa cgacaagaat aaatgtgtcg taactatttt
     3721 cagcacttgc tttattcatt gcattttcaa gcgcttcttg acgtgcaaac acttcttcga
     3781 catccacact gttcacttgt gcgatacgaa ctgtgtagtc ccccatactg aatgattttg
     3841 catctgtatt taataattcg tcttctgttt tatttgttgt agaagcacca gcttttaaca
     3901 tctctaaacc gtatgtttgt aaatcgacat tagcgatttt agcgagtgct tgtgctgcat
     3961 caatatcttg ttgtgtacat gttggggatt tgaataataa actgtctgaa ataattgcag
     4021 ataccattaa acctgcaatc tcaggacgaa tttcatagtt gcgctcatta tacattttgt
     4081 acaaaatcgt tgctgtacag cccacaggct ccgaacggta ataaagcgga cctgctgttt
     4141 caaaattcgc gattctgtga tgatcaatga catgtcgaat attcgctttt tcaatgttgt
     4201 gagcgctttg ttgaaactca ttatggtcaa ctaaaatgac gtcttgccca gttaagtcat
     4261 ctgttaagaa ttctggaact tctacgttga aataatctaa cgcatattga gtttcaggac
     4321 ctaactcacc aatacgaaat gctttagctt ccttgtttcc atgttgttgt tcgaaatctg
     4381 ccattatgat tgccgaagaa atggcatcag tgtctgggtt ttgatgacca aaaatataag
     4441 ttgtcattat taaatctcct attcatatta taaatttcag ttctatttta gcacggcgaa
     4501 tagcaattat tctacctgag cgcccaatgt cgttttaaaa tgtgtgagtg cccattggtg
     4561 tccagcttca ttaaatgtcg ctacaccttt tttagggata attaattgat aatttaaatt
     4621 gtatgcgcta atcgcagtgt gtaagacaca aatatctgta cacacgccga caatttcaat
     4681 agtgtcgact tggcgttcgc gtaacatact atctaaaggg gtaccgtaaa atgaatcgta
     4741 acggcgttta tctataaaat aaacatgtgc gctatctttt atcatatcat ataatgcttt
     4801 cacttcacca tacaattcac gaccttttgt gcctttaata ttgtgtggcg ggaaacattt
     4861 tgtctcagga tggtaaggat catcttcaaa atgtaaatcc atcatgaaaa aaatattttc
     4921 ttgtgcttcg tggtatgctt ttatacgttc cacaacgtac ggctcaatgg cttgaccagc
     4981 cgcaccacaa gtcagtttac catcatctgc aacaaaatca tacgaataat caacaacaac
     5041 taaagcttta tttgacattt cattctctcc taaaagtggt ataaagatta aacaacagta
     5101 taataagtat aacttaatcg cgaaaggaag gcacgtatat gaaaataaat gttttagatt
     5161 ttggtgcgaa aggccagaat cgattgttag acacttgggg catacagcgt gcgctcaacc
     5221 aagctcaaaa aggaccgatt actgtctaca ttcctagcgg tacttatcat atcgcaaaag
     5281 cattaaagat ttatgaagga acgacactca tattagaccc agatgcacaa atgttaagga
     5341 ctggaaaaga tgcattgttg aaaaacggca caagtttaaa acgctattac ggttacaatg
     5401 gcaacagtca cattaaaatt caaggcggta tttggaatat gaatggcgtc ctttaccctt
     5461 acaataatac agcaatgtgt ttaggacatg cacaagaaat tgaagtttgt catttaacaa
     5521 ttaaaaatgt tgtagggggt catgggatag atgcatgtgg gctcgacggt ttgcacgtcc
     5581 atcattgcaa ttttgttgga ttttatgatg tgactggtga acgttggttt tcagaagcag
     5641 tacaattaga tttatttgtt gaaggcgcct ttccaaaatt tggtgtcaat gatggcacga
     5701 ttacgaaaaa tgcggtcatc gaacattgtt attttggtaa ttcttttgaa ggggatatgc
     5761 aaagttggaa tcgtgcaata ggttcacacg cgacacgctt cgatcgtttt tatgaaaata
     5821 tcattattca acataatgtt tttgaagata cgcaagatta tgcgctaacg ccattaaaag
     5881 gtaaaaatat ctttattcag cataatctgt ttttaaactg tacaggtggg attcgttatt
     5941 taggtgtaca tcaaggtaaa aatgcagtga ctttagaagg aaatcatgaa ggtaaacaag
     6001 ggggcgacgg tttgtatgta atgcacaatg actttgtgaa taacggggct aaagatgtcc
     6061 tacacattcg aagtcaccaa gatgcacctc ataccgatgt caacgtgata ggcaatacat
     6121 ttatgggtgg acatcaagtc gcgcaattaa caggtgtaca tgacattgcc attttaaata
     6181 atgaacattc acctcaatgg aatcaaaagc atgtcacagc attcatcaca gataaaagtg
     6241 agtaactagg aagggggatg ggacattaag ttatcccatc cccttcttca acaattatta
     6301 atgaaaacgg cctaaatttt taattttgaa atcaagagtc tctaatatcg ttaatatttt
     6361 gtttaacact gttgtatctg ggcattcggc ttgaacgaaa aagcgataca tgcctaattg
     6421 tgttttgagt ggtcgagact ctatccattt taaattgact tgaaacatcg caaacgtgtt
     6481 caaaatactc gcaaggagac ctggtttatc ttctgtcggt gtaatgacta ataaacattc
     6541 ggatccactt tgatttgtca cttcagaagc atgttttaaa acgagaaaac gcgtcatatt
     6601 atgaggataa tcctcgatgt gtgtcgcgag tgcctcatat ccatacattt ctccacttcc
     6661 gagaggggca atcgcaccag ttgtggcatc aattttttcg agtgatgcga cagtgctcgt
     6721 cgtataatca tagtcaaatt gttgttcatg aataaacttt tgtgtctgac taattgctgg
     6781 gctgatagaa tagacacgct gaatatcttt gaacgattga tttggtaaac cgtacagtgc
     6841 aaaggcgata tctaaaaata tttcttcaat gatgacaaaa ttttgttcga taagtgagtc
     6901 ggcaatcaca ttaatcgtac cttcaataga attttcaatc ggcacaattg cactcgctga
     6961 cgggtctttt tgtaaggatg acatcacttc atacaaatta gaacgttcga ccaattgttc
     7021 tttttgattt gtctgagatt gtaatttcaa agctgctaaa tatgaaaaag tacctttagg
     7081 accaaggtag aaaagtgtca taacctcatt cctttcacat gaattgcctt tattttacat
     7141 gatgttagtg aaaaggacag cctgttgatg tatttttctt gtaaaaaaag ttcggttgac
     7201 gtgtttcgtt ggaaaaaccg tgatgataat tggtggtcaa agtaggtgac aacggtggtg
     7261 cgagccaaga ccatttgcct gtaacagttc tgcctttacg tgcttcggcg gtttcgaatt
     7321 tttcaaactg tttagaggcc gttaaatgat cgaccatgga cacgccagct tttttaaatg
     7381 attgtaagac agcatcattg atttcaacga gcacacggtc tttgttaaaa gttgcatttc
     7441 gtaaatctgt atagcccatt gccgtcgcaa atgtttccag taaattgtag cggtatgtat
     7501 ctgtaaagtt gcgaacagca atttctgtca ccatatacca accattgaaa ggtgctgtcg
     7561 gataagtgat accgcctatt tttaaatcca tatttgaaat aatgggtaca gcataccatt
     7621 tcaaatttag cgctgacaca ttcggaaatt ggtcatgtgt aatcggtact tccataatcc
     7681 aatctgaagg atagtcaaaa tacttcacag gttgattagg gagttgataa atgagtggca
     7741 acacatcaaa gtcggtatgt gcgcccgtcc accctaaatg ttgagccagc ttcgtgatcg
     7801 atttttcact tggatcgcct ttatcgtcat atcctgcata ccgaatcagc tgattattcc
     7861 aaatttgagg cccctcttca tccgactgcg cataaatcgt tatacaaggc ttgatacgac
     7921 cgtcattagt cgcagttttg atgtgtgatt caatggattc taaaaagggt gtttcttctt
     7981 taatatcccg cgcatcaatc accttcaagc tttcccaaaa taaacgaccg atacagcgat
     8041 tagaatgacg ccaagctaca cgtgcaccat aggtcagttc atctgtcgta tgttggtatg
     8101 tccctgttgt atgaatggct tgttctattt ctgctaagcg cgcatcacgt tcagttgtag
     8161 ataaatctaa ttcatcatac atttgtttaa taaatgcttg tgcttctttt agcatattcc
     8221 ccacctcatc gttattataa tgaaattcat gtcacctttg aaatgaatat gacaattgtc
     8281 ataatattgt ttgactttaa tgattcttga aacagtaaat atcggcaatt tgaaccttag
     8341 ttgagttcat tacgttaatc tcactcgtta tacttataga gtgaaaaagt acaatgaaag
     8401 attgccaaat gataggagac gcttgaggaa tcagctgaac ctgaaaatcc atcaccaatt
     8461 ttgaatagcc acagatacat agttgatgac tactttgaaa gattaatgct tagcatatta
     8521 gaatagaaag gggatatcac cattgataag actttcgcat aaaaaggttt gaagtgaata
     8581 aaattgcata atgccccgag acgcctgagg tattaaagcg aaattgaaaa tacaccaagc
     8641 ctttcctttc tgtaacagtt gaatcaaaac gttggttagt gggagtgagc gcctaggaac
     8701 gcaagggtgg gttctgcaac cagtatggta aggacaaaga ataaatttaa ctttagagcc
     8761 cttaaaattg aaatgttcaa acgcaagaaa cctttcctat tgtgtgatat gatagcaata
     8821 ataagaaaag ataaaaggag tctatcatgt atcaatataa agatgacagt ttcatgttac
     8881 ataatgattt gtatcaaatt aatatggccg aatcgtattg gtttgatggt atccatgagc
     8941 gtaaagcagt attcgacctc tacttcagaa acatgccttt cggaagcggt tatgccgtat
     9001 tcaatggttt acaacgcgtc attcaattga ttcaaaatct tcatttctca gtcacagata
     9061 ttgaatacct taaatccatt ggttatcaag atgacttttt aaactatttg gctgatttaa
     9121 aatttactgg caatattcgt tcaatgaaag aaggcgaact ttgtttcaat aacgaaccgc
     9181 tcatgcgtat tgaagcgcca ctcattcaag cacagctcat tgaaacagca ttgctcaata
     9241 ttattaattt ccaaacactt atctcaacaa aagcgagtat tattaaacaa gtggcagtcg
     9301 atgatgtatt aatggaattt ggtacaagac gtgcacatga atttgacgct gcgttatggg
     9361 gtgcgcgtgc tgcaatcatt ggtggctttg attcgacaag taacgtacgt gcagggaaac
     9421 ttttcaatat tccagtctct ggtacacacg cgcacgcatt tgtacaaacg tatggtgatg
     9481 aatatactgc ttttaaaaaa tatgcagaac gacatcgcaa ttgtgtattt ctggttgata
     9541 cgttccatac tttaaaatca ggcgtaccaa atgcgattcg tgtcgcaaaa gaacttggcg
     9601 accgtattaa ttttatcggt attcgcttag attcaggtga tatcgcttat ttatcgaaaa
     9661 aagcgcgtca aatgttagac gaagcgggtt tcaaagatgc gaaaattatc gcgtcaaacg
     9721 atttagatga acagacgatc agcagtttga aagcacaagg cgctgctgtt gattcttggg
     9781 gtgtcggcac aaaattgatt accgcttatc aacaacctgc tttaggtgct gtgtacaaac
     9841 tggttgctgt agagaacaac gagggcaaac ttgtcgatcg gattaagctt tccaacaatg
     9901 ctgaaaaggt aacgacacca ggtaagaaaa aagtgtaccg cattattaat acgaaaacga
     9961 acaaatcaga aggggactat attacgctag aacatgaaga cccgaatgaa gaaaaagttt
    10021 taaaaatgtt ccatccgatt cacacataca aaatgaagcg aattaaaaac tttaaggccg
    10081 ttgatttaca tcatgacatt tttaaagacg gtcagctcgt ttatgattgt ccgacagaaa
    10141 tggaagcgaa agcatatttg aaaagcaact tggaatattt atgggaagaa aacaagcgtt
    10201 acttgaatcc tgaagagtac cctgtcgatt taagtacgtt atgttgggaa aataaacaaa
    10261 agcgcatttt tgaagtcgct gaaaatgtaa aggagatgga agaaaagtat gaccatgagt
    10321 gaaatgcagg cgatgattgt agaagagatg aaagtgaaac cgagtatcga tagtgctgaa
    10381 acgattaagg agatgcaaca ttttatcgaa caatacctcc atgcacatac gtttgttaag
    10441 acgttagtgc tcgggatttc aggaggtcaa gattctactt tagccggaaa acttgtgcag
    10501 ctcgctgtag aaaatatgag aaatgcttca ggtagagatg ttcagtttat tgcggtgaag
    10561 ttgccgtatg gtgtgcaaaa agacgctgat gaagtcgagg atgcattgaa cttcattcag
    10621 cctgaccgta tcgtgactgt aaatatcaaa ccggctgtcg accaaagtgt gcagtcgcta
    10681 caagaagcgg gaattgcatt aagtgatttt cataaaggga atgaaaaagc tcgagaacgc
    10741 atgaaagtgc aatatgcgat agcggcgaat acgagtggga ttgttgtcgg tacagatcat
    10801 tctgcagaaa atatcacggg ctttttcaca aaacatggag acggtgcggc agatattgcg
    10861 ccactattcg gtttgaacaa acgtcaaggt cgtcaactgt tacaatattt aggcgcgccc
    10921 gcacatttat atgaaaagat cccgactgcg gatttagagg atgacaaacc ccaacttccg
    10981 gacgaagaag ctttaggcgt gacttatgaa gcgattgata attatcttga aggaaaaggc
    11041 gtatcaccag aagatgcagc agtaatcgag cgtcactacg tcagaaatgc acataaacgt
    11101 gaattggcat acacacgctt ttcatggcct aaatcagata agtaatgaca aatataaaag
    11161 aacttgatac aatgagctag atttttaaaa ggaaaagagg gtgcgtatga gtttaatcaa
    11221 tgacaatcct tggctaatgc tcattgccat tttcgtcatt aacgttgcct atgtcacagc
    11281 actgacgatg cgtgtgattt taacgttaaa aggttaccgt tatgttgcgg cacttgttag
    11341 ttttgtagaa gtgtttgtct atattatcgg tttaggtttg gtgatgtcga gcttagatca
    11401 atttcaaaat attattgcct atgcccttgg tttctctgtg gggattattg taggaatgaa
    11461 gatagaagaa aaactcgcac tcggttattc ggtcgtcaat gttacgacag cagactatga
    11521 gttggatttg cctcgtcagc tgcgtgcact agggtatggt gtaacgcact ttggtgcaca
    11581 tggccgtgac ggtgaccgtt tagtgatgca aattttaaca ccgcgtcgtt atgaattgaa
    11641 actaatggat acgattaaac aattggatcc taaggcattt attattgcgt acgaacctcg
    11701 aaatattcac ggtggtttct gggttaaagg cgtaagaagt aaaaaagtaa aggcgtatga
    11761 tacagatgaa atttaaagtt gaacctgatg aaacgattca agattgttta gcaagaatga
    11821 aagcggcagg atatatgcca gtgaaacggt ttgaaaagcc cgtgtttatc gaaaatgagc
    11881 acggtgacat cgaagtgtta agacaagaga ttgaatttac aggtaaaaaa ataccggatg
    11941 catttgaatc ataagagaaa ggcagcacat aacaattgaa catgtgctgt cttttttata
    12001 gctatgatgt acattgaata tgttaaagca atccaatgac aacgtgttac tcgaaaaaga
    12061 aatatcgaat gttttaatga tttaactttt taatgttcgt ctttgttgtg tgttgtcaag
    12121 agtgagacat gaacttgaag taccgaaaac gaacatgtag aaatgcaatc aaagcacgat
    12181 aaactttgaa ttatcagtat tttgatggtt gggttacatt ggaatttact atgcgtatga
    12241 atgaaaacaa taaattgaca cgaataagca tttgaggctt gattacgaac gataaatttg
    12301 tttgaataat acatgtacac gattgattgt tttgatacaa tgaaactaac attacaagat
    12361 tggagtttaa taaacatgat cgaacgttat tcaagagaag aaatggctca aatttggacg
    12421 gatcaaaatc gttatgaagc ttggttagaa gtggaaatcc ttgcgagtga agcatggagt
    12481 gagttaggtt acattccgaa agaagatgtg aaaaagattc gccaacatgc acgtgtagat
    12541 gtggaccgtg caaaagaaat cgaactagaa acacgccatg acgttgtcgc tttcacacgt
    12601 caagtctcag aaactttagg tgaagagcgt aaatgggtac actatggttt gacttcaact
    12661 gacgttgtag atacagcgtt aagctatcag attaaacaag cgaatgacat tttagaacaa
    12721 gacattcaac gtttcattga tgttttagca gcgaaagcga aaaagtataa aacaacatta
    12781 atgatggggc gtacacatgg tgtgcatgct gagccaacga ctttcggttt gaaaatggcg
    12841 ttatggtatg cagaaatgca acgtaacatg gaacgtttca aaaatgtaag aactgaaatc
    12901 gaagtcggta aaatgagtgg tgcagtgggg acgtttgcaa acattccgcc tgaaattgaa
    12961 gcctatgttt gtaaacattt aggtattggt actgcaccga tttctacaca aacgttacaa
    13021 cgtgatcgtc atgcatacta cattgcgacg ttaagcttaa ttgcaacttc tcttgaaaaa
    13081 tttgctgtcg aagtgcgtaa tcttcaaaaa acagaaacgc gtgaagtgga agaagcattt
    13141 gctaaagggc aaaaaggctc ttcagcaatg ccgcataaac gtaatccaat cggttcggaa
    13201 aacattacag gtatcgcgcg tgtgattcgc ggttacttaa cgactgcata tgaaaatgtc
    13261 gcattatggc acgagcgcga tatttcacat tcttcagctg aacgtattat gttgccggat
    13321 gtaacgattg cattagatta tgcattaaac cgtttcacaa atattattga tcgtttaaca
    13381 gtttatgaag aaaacatgac tgagaatatg aataaaacgt ttggtctgat ttattcacaa
    13441 cgtgtgttgc ttgcgcttat tgataaaggt atggtccgtg aagaagctta tgatacagta
    13501 caaccaaaag caatggaatc ttggcaaacg aaaacgccat ttagagaact tgtagaagcg
    13561 gacacgaaaa ttacagataa gctttcaaaa gaagaactcg atgcttgttt tgaccctaga
    13621 catcacttga accaagttga tacaatattt aaaagagtcg gtttagaata atttcactac
    13681 actttaatct attaatccgt taaaatagtc atagattatg aatatagggg ttgttcgcat
    13741 gcaaatagaa aaattacgcg gaaaagcttt agatgagtta ttcgatgcag ttttaacttt
    13801 agagacgcgt gaagaatgtt atcaattttt tgatgattta tgtacagtga atgagttaca
    13861 atctttatca caacgccttc aagttgcgaa gatgatcaag caaggttaca cttatgcaac
    13921 gattgaaaaa gaatcaggtg catcgacggc tacaatttct cgcgttaaac gttctttaca
    13981 atggggaaat gatgcctaca caatgatttt agaccgtatg aatattgaaa ctaaattgta
    14041 actgaatgaa ataagtaaaa tgaagagact tctttcaaca ttgactttta ataaagtgaa
    14101 tagcgaaaga agtcttttat tttcgaggca gttaacatac cgcgttgaag tgaaaaggac
    14161 gtctcttatt gataaaaagt cagcagatgc actttggttg atgatagcat tcatttttgc
    14221 gaagtggtta attaacgtga aaaccatgac caaagtctga accgtttctt tcatttgaac
    14281 catataccca catgttcata ttaaacgcag tagctatcta aataacgtta actgagtgag
    14341 atgcatgaca ttgctctcct cctttgcttc tgttcatgcg agattgccgg atggacgaga
    14401 ctcccgaggg aacagctgat ccggaaaatc caccaacgct tacaacaatt gtcaccgtaa
    14461 aatcaaagcg ttggttagtt gaaggatcag cccctgggaa cgcgagtcca agacggcaat
    14521 agtatgcaag tgaaatgttc aaaaggagcg tatgcaagtg aaatgttcaa aaggagcgta
    14581 tgcaagtgaa atgttcaaaa aggaatgcat gcatatgaca tgttcaaaaa aagtaagcac
    14641 aatcatcaaa tgaacttaga tatcaaccac caaaagtgct ataatatgag ttacgaaaat
    14701 taaaggagtc accaacgatg tatgatatca aggaatggcg tcatatcttt aaacttgatc
    14761 ttgctaaaga gatttcagac gccgatttag aacagatttg tatgtcaaat acggacgcca
    14821 ttatgattgg gggcacagat gatgtcactg aagataatgt cattcattta atgagtcgcg
    14881 ttcgtcgtta tccattaccg ttagccttag aaatttcaaa tcttgagagt acgatgccag
    14941 gatttgattt ttattttgtg ccgacagtat tgaatagtac agatgtgaca taccataacg
    15001 gattattaca tagtgcgctt aaagtctatg gacacatgat tgattttgat gaaatggtgt
    15061 ttgaaggtta tgtcgtgttg aatcctgaaa gtaaggtcgc gacaaagaca agtgcacagg
    15121 ccacattaga tgaatcagat gtcgtggctt atgcgcaaat ggctgaatcg ttttatcgtt
    15181 tgcccgtgct ctatttagaa tacagtgggc aatacggcaa tcctgaaatc gtccgtgcag
    15241 cgaaacaatc gcttaaccat acgcatttgt tttatggcgg gggaattgat ggcgtagata
    15301 aagcgatgga aatggcacaa atagcagata cgattattgt aggtaatgtg atttatgaag
    15361 atttaaaagc agcacttaaa acgacgaaaa taaaggagag aacataatga atccactcgt
    15421 tgcaaatatg aataaagaac agagtgaagc ggtgcgcacg actgagggac cgcttttaat
    15481 tatggcaggt gcaggttctg gtaaaacgag agtactcacg catcgaattg cctatttatt
    15541 agatgaaaaa gatgtatctc catacaatat cttagcgatt acttttacga ataaagcggc
    15601 aaaggaaatg aaagaacgtg tgcaagcact tgtaggtgaa gaggcagaag tgatttggat
    15661 gtcaacattt cactctatgt gtgtgcgcat tttgcgacgt gacgctgatc gtatcggtat
    15721 tgaacgcaac tttacgataa tcgatccgac cgaccaaaag tcagtcatta aggatgtttt
    15781 aaaacgagaa aatatcgacc cgaaaaagta tgaaccgaga atttttattg gagaaatcag
    15841 taaacttaaa aacgatttat tgacacctgc aaaagctgag gcagaagcag atgactttta
    15901 ttcacgtatg gtcgctacgg tatacaaggg ctatcaacaa cagcttgttc gtaaccaagc
    15961 attagatttc gatgatttga ttatgacgac aattcgattg tttgaacgtg tgcctgacgt
    16021 gttagatttt tatcaaaaca aattccaata tatccatgta gatgaatatc aagatacgaa
    16081 cacagcacaa tatacattgg tgaatatgtt agcgcaaaag tttaaaaacc tatgtgttgt
    16141 aggggattca gaccagtcta tttacggttg gcgtggcgca aacattcaca atattttatc
    16201 gtttgaaaaa gattatccga atgcacgtac aatcttttta gagcaaaact atcgttcgac
    16261 aaagacgatt ttacaagcgg ctaacgaagt tattcgtcat aatactgaac gtaaacctaa
    16321 aggactatgg actgccaatc agcaaggtga aaaaattcat tattatgaag cgatgagtga
    16381 gcgtgatgaa actgaatatg tcgtgagaga aatttttaaa caacaaaaaa agggtaaacg
    16441 ttataaagat atggcggtac tttatcgaac aaacgcacaa tcacgtgtac ttgaggaaac
    16501 atttttgaaa tccaacattc cttatgtcat ggtcggcggt caaaagttct atgatcgtaa
    16561 agagattaaa gacttactaa gttatttgcg tttaattgcg aatagtgccg atgatatcag
    16621 tttacaacgt attattaatg tgccaaagcg tggtatagga ccgtcttcag ttgaaaaaat
    16681 agcaacctat gctgtagatc atgaattgac aatgtttgat gcattggcag aagtcgactt
    16741 catcgggtta tcaaaaaagg taacacaagc ggcggcagaa ttttatcaat tgatgtcgaa
    16801 cttaatgcaa gaacaagaat ttctagaggt ttcagaaatt gttgatgaag tgctcgaaaa
    16861 atcagggtat cgtgaaatgt tagagcgtga acaatcaata gaatcacgta gccgtttaga
    16921 aaatattgat gaatttatgt ctgtacctgt cgattatgaa aagaacacac ctttagagga
    16981 gcagtcgctg attaattttt taacggactt atcattagtg gcggatgtcg acggagcgaa
    17041 cttagaagat ggtgtgacgt taatgacgat gcactcagcg aaagggctag agtttccaac
    17101 tgtatttatt atcggtatgg aagaatccat tttcccgcac attcgtgcaa ttcaaagtga
    17161 gagtgatcac gaaatggaag aagaacgacg catcagttat gttgccatta cgcgtgctga
    17221 agaagagctt tacttatcac atgcgacatc acgtacgtta tttggacgtc cgcaaagcaa
    17281 tgcgcgttca cgttttttaa atgaaattcc agaagaactg cttgatttac cagaacgtca
    17341 atatgcaacg acgattggtt cgagaaaacg tcaaccggcg aaacgaggct ttagtcaacg
    17401 tgcggtgaaa aattcagctt catcatcaac agcgtcaaat tggaaagtcg gcgataaagt
    17461 gatgcataaa tcatggggag aaggcatggt ttcgaacgtc aatgataaaa atggctcaat
    17521 agagttagat attattttca aatctgaagg acctaaacgt ttacttgctc aatttgcgcc
    17581 tattgaaaag aaggaggatt aaaggatgtc atctatagct caacgtgttg aaatattgca
    17641 caaattattg catcaataca actatgaata ccacgttcaa gacaatccaa gtgttccaga
    17701 tagtgaatac gacaaattat tacatgaatt gattgatatt gagacaaaac atcctgaact
    17761 gaaaacttcg gattcaccta ctgtacgtgt aggcggcgag gcacagtcat cgtttgaaaa
    17821 ggtcaatcat gatactccga tgttaagctt atctaacgca tttaatgaag cggatttaag
    17881 aaagttcgat caacgtgtgc gcgatgcagt cggtgaagtt gaatatatgt gtgaattgaa
    17941 aattgatggt ttagccgtat cattaaaata tgtcgatgga aagctcgttc aaggcctaac
    18001 acgcggtgac ggcacaacag gtgaagacat tactgaaaat ttaaagacga tttatgcgat
    18061 cccacttact ttagacaaaa agatttcctt tgaagtgcgt ggtgaggctt acatgccgcg
    18121 tcaatcattt ttaaagttga atgaggcgaa agcggcgcgt gatgaacaac cgtttgccaa
    18181 tccgagaaat gccgctgcag ggtcgttacg ccaactcgat tcaaaacttg cagcagctcg
    18241 aaaattggac atctttttat acagtattaa tgactttaca gaacttgatg cgtcatctca
    18301 aagtgaagca ttagatgaac tggacgaact tggttttaaa acgaaccatg agcgtgaaaa
    18361 agtaaaaacg attgatgaag tgctggaata tattaaaaaa tggacaaatc agcgtgaaca
    18421 attaccttat gatattgatg gaattgtcat taaagtgaat catcttgagc atcaagagga
    18481 gatgggcttt acacaaaaat caccgagatg ggcgattgca tacaagtttc ctgctgaaga
    18541 agtcattaca gaactgttag atattgagtt gagtattggt cgtacagggg tagtgacacc
    18601 aactgcgata ctcgaacccg tacgtgtggc aggcacaacc gtttctcgtg cgtcgttaca
    18661 taacgaagac ttaattcatg agaaagacat tcgtattggt gatagtgtcg tcataaaaaa
    18721 agcaggagac atcattccgg aagtcgtgcg tgtcatttta gatcgtcgtc cagagggtgc
    18781 cgagacgtat cacatgccga cacattgtcc aagctgtgat catgaacttg tacggattga
    18841 aggcgaagtg gcactccgct gtatcaaccc aaaatgtcag gcacagctcg ttgaaggttt
    18901 aattcatttc gtatctcgac aagcgatgaa tattgacggc ttaggtacga aaataattga
    18961 acaattgtat acacacgcat tgattaaaga tgtagctgac attttctact tgacgaaaga
    19021 agatttatta ccgttagaac gtatgggtga aaagaaagcg caaaagttaa ttgatgcgat
    19081 tgaaacttca aaagcacgct ccctcgaaaa cttattattt ggactgggta ttcgtcattt
    19141 aggtgttaaa gcgagtcaag tactagcaga aaaatacgaa acgatggacc gactattaac
    19201 agtcactgaa gatgaattag ttgaaattta tgacgtcggt gaaaagttag cgcaatcgtt
    19261 agtgacgtat ttagaaaatg aagacattcg cgcactgatt gaaaagttgc aatcaaaagg
    19321 tgtcaatatg acgtttaaag ggcaaaaatt atcgcaaatt gaaggccatc cagaatttgc
    19381 aggtaaaaca atcgtcttaa caggtaaact tcaacagatg acacgtaatg aggcaacgaa
    19441 ttggttgaaa ctacaaggtg caaaagtaac aagtaccgta acgaagtcca cagatcttgt
    19501 cattgcaggt gaagatgcag gttcaaaatt aacaaaagcg caatcacttg gtacaatgat
    19561 ttggacagaa caagatttta ttgataagca aaatgaaatt aatgagtaag gggataggcg
    19621 atgaaaaagt caatagtact tcttttaggt ttatcacttg tattatcagc ttgtggtcca
    19681 gatgaagatg aatcaaagtc ctcgaaagaa aaaacagaag cgcaacaacg agaccacaat
    19741 aaagtaaaag aaatcgcaac agataaaaat gtgcaaggaa cagattatcg aacaattttg
    19801 ccatttaaag aaagtcaggc acgtggatta attcaagaaa atatggcgaa tagctataac
    19861 ggtgaagatt ttgaagatgg cctactcaat atcagtaaag aagtgtatcc aactgatgaa
    19921 tacttgtatc aagatggtca atatttagat aaagacacga ttagagctta cctgcgtccg
    19981 aaatatacga aaaaagaact tgataaaatg agcgacaaag aaaaagagaa taaaaatgcg
    20041 acagcgaact taggattaaa tccatctgtg aatggcgaaa cagatgaaga aaaaatcgct
    20101 aaaaaatctc ctgcttattt atctaatatt ttagaacaag acttttacga taatggtgac
    20161 actaaaggta aagatattga aggtatgaca atcggtttag caatgaatag tgtgtattac
    20221 tatcaaaaag aaaaatatgg cgaaacatat catgaaaaac tcgatgaaaa agaaattaaa
    20281 aagcaaggcc gacaaatggc tgaagaaatg ttagtgcgtt taagagaaaa tgatgatttg
    20341 aaagatattc caatcacctt tgcgatatac attcagtcag cacaagagga cattattccg
    20401 ggtcgttttg tgagttatgc gacagccgag aaaaaagggt ctaaactgtc agactggcat
    20461 caaattgatc aaaagactgt gttgttaccg tcaagtgagg catcagattt gaatgaaaat
    20521 ctcaatgcga acttcaaaga ctttaacagt gcattacaat cttacttctc taactttaca
    20581 caagctgttg gtaaagcaga gtttaaaaac aaaaaagtac aaaatttaac tgttgattta
    20641 ccaattgatt attatggtaa agcggagtta atcgggatta cgcaatatgt gacacagctc
    20701 gctgaaaaag actttaaatc tgtggatcaa tatgagattc atattaaaga tggaagtcag
    20761 ccacgtgcgc ttatacgtaa aacgaaagaa gaaaagtcac cacaagtaca tatttatcaa
    20821 aactaatatg aatggtgaat aaaatgagaa aaacgaccac gataccatga gttcatatga
    20881 ctctaaggta acagtggtcg ttttttaagg cagtcatttt gagaatcaaa gtagttattc
    20941 tttttaaaca tggtagttaa aagcgtaata tcaattcgtc gtcacatttg taagtacttt
    21001 ttattttcca gataactcta tatgatgact cgtccaacat caatgcatgt cgattctata
    21061 tttcgagaaa aagcgtaaaa aacattgaaa gtccgcagtt tggacagcat aagctaaata
    21121 aaaaagaccg ggcattatcc cagtctctca gtataatcat atcatggaac acattcacaa
    21181 taagcaattg attgtaaaaa ttgtatcgtt tcttttaatt ttttaatttt gcgtcattca
    21241 attgcttgac gacttgattc aaatcgtctt ctacaaaggc acccggtttt tgtgtcatat
    21301 ttgaaaccag gatagtaacg actaaactca caataaagcc tggaacaatt tcgtataagt
    21361 taaagaaatc gttcacgtca ccgtatggat gcgcaaatac aatccacaaa atcacagtta
    21421 acgcaccagc aaccatcccg cttattgccc ctgtacgtga taaccctttc caatacaatg
    21481 aaagtataac taacgggcca aaagccgcac caaaacctgc ccatgcatta ccgactaagt
    21541 ttaaaatcgt attgttcggt gtccaagcga tggcaatagc agcaaccgct acaatcatta
    21601 cagaaatacg tcctactaac acaaattctt tctcatgtgc agcggcattg gctttgtcac
    21661 cacgaatcag tttgtaaaag tcttctgtta atgaactaga cgtaacgagt aattgagaag
    21721 aaatggtgct cataatcgct gctaaaatcg ctgcaagcaa gaaaccaccg actaatggat
    21781 ggaatagcaa ctgactcatc aaaataaata atgtttctgg gtcttgaatg tgaacacctt
    21841 gtgctggaac gaacgcgata ccgagtagcc cgactaacac agcacctaac aatccgacaa
    21901 tcatccatgc aatcccaata cgacgtgtaa gagggaataa tttcacagta cgaatcgaca
    21961 tgaaacgaac aagaatgtga ggttggccaa aatacccaag tccccatgca aagaatgaaa
    22021 taatcccaat cacggttgtc cctttaaata aatctaaatt ggtcggtttc atttctgcaa
    22081 tcgtatggaa tgtgtctaaa ccatttaact ttaacatcac aacaataggt accatgacca
    22141 ttgccactaa cataatgacc ccttgaaaaa agtcagtgat cgaaacagcg agatacccac
    22201 cgaaaaacgt gtagagaata acgataaccg caattaaaat taagccgaca tgataatcta
    22261 atccgaatgc actgtcgaat aacttaccac ctgatactaa accagcatgc gtatacaatg
    22321 taaagaatac gacaatgatt aagccggaaa ttattttaat taaattcgac tgatcatcta
    22381 aacggttttt aaagaaatct ggtaacgtaa tcgcatcacc ggcaatttct gtatgtgcac
    22441 gaagtcttgg tgcaacaact aaatagttaa tgtaagcacc gagtgttaga ccgatcgtaa
    22501 tccatacggc agataaccca gttgaatata cttcaccagg taatcccata atcatccaac
    22561 cactcatatc agaagcacct gcagagaggg cagttaccca tggaccaatg ttacggccac
    22621 ctaacatata ctcactcaag ttactcgttg cttgtttata gccatagtaa ccaatgccga
    22681 gtaagataat gaaataaatg gcaatcataa tatacgtttg ccaatcgaga ttcacttgat
    22741 ttgacaaagt agaaccaaat aaaaccatat tgatctcccc ttttgttttc acttgcataa
    22801 gattattata cagaattgta tatgaaagga aagaagtatt tcacagttta tgtgtaattt
    22861 aaccttgtta tcacaagaga aatagcgatt taggcgcata agcagagaga agttgaatat
    22921 cgataattat taagtttaat gttataaata taaataaaac atatagtgag gcggcgtact
    22981 tgtgaaaaat gatagcgtcg tccgtgttcg ttcgtgtcaa cattgtgtcg tgatgcgcct
    23041 tgtttgaaat attttagatt tttatgctga aatttggtac aatttataga taaaagagta
    23101 tttttaagga ggctttaccg gcatggctga gattaccaaa aaacaagttg agcatattgc
    23161 gaatcttgca cgcttaaatg tgacagaaga agatactgcc gatatgcaac agacattaga
    23221 aggtatttta aatttttgtc atcaaattga ctctgtcgat acagaacaag ttaaacctac
    23281 aaaccatgta ttagatttac agaatgtgtt acgtgacgat gtggcggtaa caggattgcc
    23341 acaagaaaaa gcattaacga atgcaaaaga agtggaagct ggacaattta aagtaccagc
    23401 agttatgaac agggaggacg cataaagatg agcatccgct atgaatctat tgaaaactta
    23461 caaaagatga ttaaggataa tcaaattaaa ccttctgaaa ttgtgaaaga tatttacgat
    23521 gcaattgaag aaacagatcc aactatccaa tcatttttag cgctcgataa agaaaatgcg
    23581 atgaaaaaag ctgaagaatt agatacctta caagcgaaag gtgaaatgga aggtaaattg
    23641 ttcggtattc caatggggat taaagataat atcattactg aaggtctaga gacgacttgt
    23701 gcaagtagga tgttagaagg ctttgtaccg atttatgaag caacagtaat gaagaagcta
    23761 cataatgaaa atggtattct tatcggtaaa gtgaatttag acgaatttgc gatgggtggt
    23821 tctacagaga cgtcttactt taaaaagacg gtaaacccat tcgaccataa agccgttcca
    23881 ggtggctcat caggtggttc agcagcagca gttgcagcag ggcttgtacc atttacatta
    23941 ggtacagaca cagggggttc tattcgccaa cctgcagcgt attgtggtgt tgtaggatta
    24001 aaaccaacat acggtcgtgt gtcacgtttt ggtttagttg cctttgcgtc atcactggat
    24061 caaattggac cgattacacg taatgttaag gataatgcat tagtgttaga agctattgct
    24121 ggtgaagatg aaatggattc aacaagtgca ccagacgttg cgacagactt tactgctgat
    24181 attggtaaag acattaaaga tatgaaaatt gcgttgccaa aagaatacat cggtgaaggt
    24241 gtcgacgaag aagtgaaaga agcggtatta aaagctgcag aaacacttaa atctttaggt
    24301 gccatcgttg aagaagtgtc attaccaaga acagcatatg gtattccttc atattacgtc
    24361 attgcttcag ctgaggcatc atctaacttg gcacgctttg atggtattcg ttacggttat
    24421 cattcaaaag aagcacaaac tttagaagaa ctttacaaat tgtctcgtag cgaaggcttt
    24481 ggcaaagaag tgaaacgtcg tattttatta ggaacatatg tgttaagttc tggttattac
    24541 gatgcttact ataaaaaagc acaaaaagta cgtacattaa ttaaaaatga cttcgaaaat
    24601 gtttttaaag attacgatgt gattttagga cctacaacac caactgttgc gtttgattta
    24661 ggtgctgaaa ttaatgatcc attaacaatg tatgccaatg acttattaac aacaccagtg
    24721 aacttagccg gtttacctgg tatttctgta ccgtgtggtt tagcggaaaa tggtcgtcca
    24781 attggtttac aactgatcgg taaaccattt gatgaaaaaa cgttatatcg cgtcgcacat
    24841 caatacgaaa cacaatttaa cttacacgac caatatcaaa aattataagg agtggcaatc
    24901 aatgcatttt gaaacgataa tcggacttga ggtccatgtt gaattgaaaa cggactcaaa
    24961 aatgttttca aatgcgccgg tagcatacgg tgcagaaccg aatacaaata caagcgtcat
    25021 cgatttggcg tatcctggtg ttttaccaac agtgaaccgt cgtgcagtag attggtcaat
    25081 gcgtgcggca atggcattaa atatggaaat tgcaactgaa tcaaaatttg atcgtaaaaa
    25141 ctatttctat ccagacaacc cgaaagctta tcaaatttca caattagacc aaccgattgg
    25201 tgaaaatggt tatatcgata ttgaagtgaa cggcgaaacg aaacgtatcg gtattacacg
    25261 tttacacatg gaagaagatg ctgggaaatc tacacataaa gacggttact cacttgtcga
    25321 tttaaaccgt caagggacac cattaattga aatcgtatct gaaccagata ttcgctcgcc
    25381 agaagaggcg tatgcatatt tagaaaaatt acgttctatt attcaatata caggcgtatc
    25441 tgacggtaaa atggaagaag gttcattgcg ttgtgatgcg aacgtatctt tacgtccata
    25501 tggtcaaaaa gagtttggta cgaaagctga acttaaaaac ttaaattcat ttaacaacgt
    25561 gcgtaaaggt ttagaatatg aagtcaaacg tcaagaagaa gaattgttaa atggtggcga
    25621 aattttacaa gaaacacgtc gttttgatga atccacaggt aaaacgattt taatgcgtgt
    25681 taaggaagcg tcagatgact accgttactt ccctgaacct gacatcgtac ctttatatat
    25741 cgatgaagca tggaaagcac gtgttcgtga atcgattcct gaattaccag atgcacgtaa
    25801 agaaaaatac gtaaaagaat tcggtttacc tgcatatgat gcacatgttt taacattaac
    25861 aaaagagatg tcagatttct ttgaagcggc tgttgaagaa ggcgcagatg tgaaaatgat
    25921 ttcgaactgg ttaatgggtg gcgtaaacga atatctcaat aaaaatcaaa ttgagttaca
    25981 agatacaggc cttacaccag caaacttagc aggtatgatt aaattaattg aagatggcac
    26041 aatgagtagt aaaattgcga aaaaagtgtt cccagaatta gcgcaaaatg gtggggacgc
    26101 aaagcaaatt atgaaagata aaggtcttgt tcaaatttct gatgaaggtg ctgtgttaga
    26161 atttgtacaa caagcaattg ctgaaaatcc acaatctgtt gaagattata agaatgggaa
    26221 aggtaaggcg atgggcttct tagttggaca aattatgaaa ttgtcgaaag gtcaagcgaa
    26281 tccacagctt gcaaatcagt tgttgaagca agagttagat aaacaatagg ttgttttgaa
    26341 tagaggcgag tagatggaat gcaatggtga tgattgtatt tcacactcgt cttttttgtg
    26401 acattttgtt ttttgagtat gacggaagat gtcgtattga ttataacacc ttgcaatcgc
    26461 agaactaggg ctcgctttca taatgtgaat atctgtatgg attgcctttt agggtttgct
    26521 ttcctagggc tgttcccaag taatcaacgc ttaactgaaa ctgttataag gtagaggcgt
    26581 tgatggattt ccggcgcatc ttttccctca ggagtcgcgc cctgaatggt aatcagttgc
    26641 gtaacaagga atgaaagcga gcttgttcta gcaatcttag ttgcggtgct caaacgagtt
    26701 gaaatgacga ataactctta ccaaacagac ggcgcatgta ttaatcatac gcatgcattt
    26761 tttcactcat tttatttata tgattattaa ttgatcttag gtgtagtggt gaaagaatga
    26821 tgaagtaact caatttcttt gcttggctag gaaagttgaa atgtcaacat atgacgcaat
    26881 cgccttttga aaacgggatt gacgttattt tcttatcatt tttacgcttt tggttgtttt
    26941 tagctttcat tacatctttg tttactataa tataagttgt gagtactgaa aaattgaggg
    27001 atataaatga gaaaacgtgc gagaataatc tataatccta catcgggtaa ggaagtgttt
    27061 aaacgtgcat tacctgatgt actaattaaa atggaacaag ctggttatga gacgagtgcc
    27121 tatgcgactc aaaaggttgg cgatgcgaca gaagaggcgg cgcgtgcgat tgaggcccaa
    27181 tacgatttgt taattgtcgc tggtggagac ggtacattga atgaagtcgt gaatggtatt
    27241 gctgaaaaac cgaatcgtcc taagttaggt ttaattccaa tggggacggt gaatgatttc
    27301 ggtcgagcac tacatctccc aactgatatt tttgaagccg tggatgtcat tttagatggt
    27361 aaaactgttc aagttgatat tggtaaaatg aatagccgtt attttattaa tttagctggc
    27421 ggtggtaaaa ttacggaagt ttcgtatgaa gcaccgagta gattaaaatc gatagtcgga
    27481 ccttttgcgt actatattaa aggatttgaa atgttacctc aaatgcatgc agtcgatgtg
    27541 cggattgagt ttgattcgca agtctttgaa ggtgaaatca tgttgttctt actcggctta
    27601 accaattcaa tggctggttt tgagaagtta gtaccagatg cgaagttgga tgacggtatg
    27661 tttacactgt tgattgttga aaaggcaaat attgcagaat tgggacatat tatgacactt
    27721 gcctcacgcg gtgaacatat taaacatccg aaagtacatt accataaagc gcaatcggta
    27781 aatatttctt cctttagcga tatgccgtta aacgtagatg gtgaatatgg gggtcaatta
    27841 ccagcgaact ttttaaattt agttcgtcat attgaagttt tttctccggc gcaagaagat
    27901 aatgcgttgt taattgatga gcctacgcaa tctgagtaac gatccagagg tgtgctgaaa
    27961 ataaataggt agtgtacgca aaaccgcatg atgtaatgac attactctcg tgggagcggg
    28021 acgatgaaat ttgactcaga tgttaagttt ttggtcctgc tcctttccct ttgaagtaga
    28081 ttctgtttat aaaaaagtga gatgaaatag atggttttag taaagaaaaa tgaagtgtat
    28141 gagggaaaag tggttgattt gacacatgaa gggcatggtg tgattaaaca agatcgctat
    28201 ccgatattta tccctcaaac gttaattgat gaagaagtgc aatataaagt gattaaagtg
    28261 aaaaagaatt tcgcgattgg taagctgatg aatgtgaaaa cggcaagtcc agatcgtgtt
    28321 acaccgccat gtgattatta ccaacagtgt gggggatgcc aacttcaaca tttgtcatat
    28381 cgtgcgcaat tagagatgaa gcgtaaacaa gtgattaatt tgtttcatca taaaggaaaa
    28441 atgacagagg tgccgattca tgacacgatt ggaatggatg atccttggcg ttatcgaaac
    28501 aagtctcaaa ttccggttgg gacgaatcgc aatggtcaga tccaaatggg cttttatcgt
    28561 caacgcagcc atgatattat cgatatggac cattgtctca tacaaaatga tgatcaaaac
    28621 gacatgatga atgtgattaa aagtttactg gaaaaatatc acattccagc ttataacgaa
    28681 cacatacatc aaggtctcgt acgtcatgtc gtgattcgta agggctatta tacgaatgaa
    28741 gtgatggtta tttttgtgct caacggtaaa aagttaccac atcataacga tattgtgacc
    28801 gctctaacat cacagtttcc gcaaattgtg agtatcaagt tgaatttcca aacgaacaaa
    28861 acgaatgtca ttatggggca tacgtccaaa acgattttcg gtaaagacat tattgaggat
    28921 acattagatg atttgacttt cgaaattggc gatttgtcct tttatcaaat caatgtgaca
    28981 caaacgcaaa agttgtatcg tcaagcgtta cagtatgcga atttaacggg taatgaagtc
    29041 gtattagatg cgtattgtgg tattgggacg atcagtttat ttatggcacc ccacgcccaa
    29101 catgtatatg gtgtagaagt tgtccctgaa gcgatagaag atgcgaaaag aaatgcgcgc
    29161 tacaatcaat tgaacaatac aacttttgtc gctggtgctg ctgaagacgt gattttaaaa
    29221 tggcaacaag acgggattca gcctgatgtg gtcacagttg acccaccgcg caaagggtgt
    29281 gacgcgacat ttattgaaac tttaaacgcg ttagccccaa aacgtatcgt ctatgtgtca
    29341 tgcaatccaa gtacacaatt acgagatatt gaaatgctaa gcgcgcaata tgaactaaaa
    29401 gaaatgacac ctgtcgatat gtttccgcat acgacacatg tcgagacagt tgcgttatta
    29461 gtaagaaaat attgatatag a
//
LOCUS       DANHPA010000015        29273 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.015, whole genome shotgun sequence.
ACCESSION   DANHPA010000015 DANHPA010000000
VERSION     DANHPA010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 29273)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29273)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29273
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.015"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(258..1202)
                     /locus_tag="PTC28_000566"
     CDS             complement(258..1202)
                     /locus_tag="PTC28_000566"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HDK5715884.1"
                     /translation="MLDFEKPIQDIQTKIESLKETQAKNDVDLSDEIEILEAALQTEK
                     EKIYTSLKPWDRVQIARLPERPTVLDYIPYIFDDFIELHGDRNFRDDPAIVGGLAYFN
                     GQPVTVIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKEAEKFNRPIFTFIDTKGAY
                     PGKAAEERGQSESIARNLVSMAGLTVPVISIVIGEGGSGGALGLGVSNRLLMLENSTY
                     SVISPEGAAGILWKDSSLAKIAAETMKITAYDLLELNIIDEVVKEPLGGAHHDVEMLA
                     KRIKQKFTKHLASFEHMTPTDIKEDRFEKFRNIGSFVE"
     gene            complement(1202..2062)
                     /locus_tag="PTC28_000567"
     CDS             complement(1202..2062)
                     /locus_tag="PTC28_000567"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HDK5715885.1"
                     /translation="MFKDFFNRNSKKKKYVTVQDSKQNEVPEGIMTKCPNCKKIMYTK
                     ELTENLNVCFNCDHHIQLSAYGRIEAIADNGTFEEFDKGMTSANPLNFPGYEEKVEKD
                     QEKTGLNEAIVTGTAELNGIKFGIGVMDPRFRMGSMGSVVGEKICRIVDHCTEERLPF
                     VLFTASGGARMQEGIISLMQMAKTSVSLEKHSDAGLLFISYMTHPTTGGVSASFASVG
                     DINLAEPKALIGFAGRRVIEQTINEKLPDDFQTAEFLLEHGQLDKVVHRSEMKKTLAT
                     LFDMHREVEK"
     gene            complement(2107..3339)
                     /locus_tag="PTC28_000568"
     CDS             complement(2107..3339)
                     /locus_tag="PTC28_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003229415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HDK5715886.1"
                     /translation="MSLRDDALQMHKENHGKLAVSPKVKVTNKEELSLAYSPGVAEPC
                     KDIHERPSRVYDYTMKSNMVAVISDGTAVLGLGNIGAEASIPVMEGKAVLFKSFAGVD
                     AFPLSLATNDTEEIIRTVKLVEPNFGGVNLEDISAPRCFEIEERLKKETRIPVFHDDQ
                     HGTAIVTVAGLVNALRIVDKDLADIKVVLNGAGAAGIAIVKLLYSYGVRHMIMCDSKG
                     AIYEGRPYGMNETKDTVAKWTNKDKIEGKLVDVIEDADVFIGVSVADALSEEMVQSMN
                     DDAIIFAMANPNPEITPDKAKHAGAKVIGTGRSDFPNQINNVLAFPGIFRGALDVRAT
                     HINEEMKRAAVEAIANLITDEERNPDYVIPGPFDYRVAPSVAREVARAAMESGVARIE
                     VDPDDVYEKTLSLTDLKK"
     gene            complement(3482..6673)
                     /locus_tag="PTC28_000569"
     CDS             complement(3482..6673)
                     /locus_tag="PTC28_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HDK5715887.1"
                     /translation="MVAHLNIHTAYDLLNSSITIEGAVQRTIELGYSAIAITDLNVMY
                     GVPQFYDACIQHGIKPLLGMTVYLTDQLNVLEAVVIAKNNEGLQNLFKLSSDIKVNRI
                     KHVSIYEKKDLFNDTVVIFKQMTNQEKHWHEEMPDGVTCFTDHQSAEDCELPKVLMQA
                     AYYEKAEDKNALKVLHAIRDNTKVNLVDSHETPTEHIYDVGALYDSQFAEAWLARTDE
                     IANMCDAKLEYHQALLPEFVTPDGSSANAYLWAELERALADFGLTEARYRKRLKYEYD
                     VITQMGYADYFLIVSDLIRYAKSNGVMVGPGRGSSAGSLVSYLLNITTIDPLQYDLLF
                     ERFLNPERVTMPDIDIDFEDTQREKVIHYVQQKYGDYRVAGIVTFGHLLAKAVARDVG
                     RVMGFDETTLSEASKLIPSKLGVTLDEAYKEERFKAFVHRNHRHERWFEYCKKLEGLP
                     RNTSTHAAGVIVNDQPLYQSIPLTEGETGLLTQWTMTEAERIGLLKIDFLGLRNLTII
                     HQIIKQVARDLKVDIDVEQIPFDDVHVFELLSRGDTTGIFQLESEGVRRVLQKLQPEH
                     FEDIVAVTSLYRPGPMEEIPTYIRRRHDPSQVTYLHPDLAPILKRTYGVIIYQEQIMQ
                     IASQFAGFSYGEADILRRAMSKKNREVLENERQHFIDGAKEKGYAETLSGQIFDLILK
                     FADYGFPRAHAVSYSKIAYIMTYLKVHYPAYFYANILSNVIGNDTKTNMMIQEAKQQH
                     ITIHGPHINKSQWRYVATQEGVYISLGAIKGVGYQTVQTIMNERREQGPYKDFFDFCN
                     RIPSRLRSRRTLEALILTGAMDCFGKNRATLLQSIDKVSDTDVSIDTDLLASVATIKQ
                     EYAETEEMPSQQLSDFEKQYLGFYVTAHPVEKAFKQKQYLGIFQLQAHVTHQPILVTL
                     DAVRVIRTKQGQQMAFVELNDGITTMDGVIFPKTYQQLTGTLETSKFYIIWGKFEKRN
                     DKLQLIINRLTTLEAFEIEKRQQTRKIVIREGMTDTLEQQYLTQKQSNNNIAVYQYQE
                     SNNQFLFKGYLLQPNLYLDALLDSIKPEHIRLL"
     gene            complement(6698..7630)
                     /locus_tag="PTC28_000570"
     CDS             complement(6698..7630)
                     /locus_tag="PTC28_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional oligoribonuclease/PAP phosphatase
                     NrnA"
                     /protein_id="HDK5715888.1"
                     /translation="MKFIPEIQEQIQQYDTIIIHRHVRPDPDALGSQFGLKEYLIAKY
                     PTKNVYAVGTEEPTLGFMGTFDTIDDAQYDDALVIVCDTANAARIDDARYDRGNALIK
                     IDHHPPVDSYAEINDVDVSASSTSEMIFDLIQGSNDLALMNDKIASALYLGIVGDTGR
                     FFFNNTSPKTMTIASQLLQYDIQHNRLLNQLGEKDPRLMPFHGYVLQNFQLFEDGFCQ
                     VKITHDVLEKFDIQPNEASLYVNAIADLKGLKIWIFAVDEGEEIRCRIRSKEITINDV
                     AADFGGGGHPNASGVSVHTWDEFESLTEALRQKL"
     gene            complement(7643..8938)
                     /locus_tag="PTC28_000571"
     CDS             complement(7643..8938)
                     /locus_tag="PTC28_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HDK5715889.1"
                     /translation="MTKHEQIIKHIESLSVGQKISVRKIAKDLDVSEGTAYRAIKDAG
                     QRGLVASIDRVGTVRIEKKARAKVDHLTFGEIAKIVDGHLIGGKGGQFNSLTKFAIGA
                     MELDNVVNYVSKNTLLIVGNRLDVQKAALERGSAVLITGGFDTTDEIKKMADEQNLPI
                     ISSNYDTFMVANIINRAMYNQMIKKEILVVEDIVIPIEQTSFLYDEMTVADVGKKSRE
                     TSHSRFPIVDRQNKLAGLITSKDIIGKDLDEKLYRVMTKPAISVQLSTTVASCAHLMI
                     WEGIELLPVTGNQKQLVGVISREDVLKAMQIVGRQPQVGETINDQVAKHIEIRNQQII
                     VEITPQLTNQFGTLSKSVSVAIIEETIKSVMRKHKKLEVMIESLNIFYIRTVQIESEV
                     EVDYTILDMGRNFAKLEVTMFSANQPVAKALIMCQLLDH"
     gene            9265..9678
                     /locus_tag="PTC28_000572"
     CDS             9265..9678
                     /locus_tag="PTC28_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDK5715890.1"
                     /translation="MHQNILLAVDTDLKNAKALQEVVKISGDSSVVTLLNIIGEQDVQ
                     ASVKMGTHYEELKQMRHEQMKPTRDTLEQNGLQYEEIIERGNPKEKIVNYANSGQYDI
                     VVLSNRKAEAAKKFVLGSVSHKVAKRAKIPVLIVK"
     gene            complement(10292..10981)
                     /locus_tag="PTC28_000573"
     CDS             complement(10292..10981)
                     /locus_tag="PTC28_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDK5715891.1"
                     /translation="MKLSFHGQSTVYFEANGESGIIDPFITGNGQTDLNVEDLKVDYV
                     ILTHGHEDHFGDTIEIAKRNNATVIGSAEMANYLSTNQGVENVHPMNIGGKWTFDFGV
                     VKFVQAFHSSSLTDDNGIPMYLGMPMGVILELEGKTIYHTGDTGLFSDMKLIADRHPV
                     DVCFVPIGDNFTMGIEDASYAINEFIQPKLTVPIHYNTFPLIEQDPEAFKKLVNVGEV
                     QIVKPGGVVEL"
     gene            11238..12293
                     /locus_tag="PTC28_000574"
     CDS             11238..12293
                     /locus_tag="PTC28_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002474995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HDK5715892.1"
                     /translation="MSKIEQLVQTLKEQQADAMWVSNPINIFYLTGYKSEPHERLFAL
                     LVRADGQQILFCPQLEVEEVKTSPFTGDIIGYLDTENPFDKHRETYGTLLIEENHLTV
                     QRYHALKNAFSVHTFEAADPIIRALRNVKTADEIDTLRQAAKLADKCMEIGVAFLKEG
                     VTEREVVNHIENEIKKYGVNEMSFDTMVLFGDHAAAPHGTPGDRQLKNNEYVLFDLGV
                     IYNHYCSDITRTVAFGQPDDKAQAIYDIVLKAEQTAIQHIKPGVTISELDDIARGIIT
                     EAGYGEYFPHRLGHGLGLEAHEYQDISSTNQNSLEAGMVLTIEPGIYVPNVAGVRIED
                     DILVTEDGYESLSGYKK"
     gene            12290..12925
                     /locus_tag="PTC28_000575"
     CDS             12290..12925
                     /locus_tag="PTC28_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
                     /protein_id="HDK5715893.1"
                     /translation="MIKEAVASSLVEVEAKLKAGANRIELCENMHESGTTPSYGMVKI
                     ASDMCQMYDAELAVMIRPRGGAFVYNWYEFESMQADIQQLKTLPIDYFVFGCLTTEST
                     LHQFQMQTLIHLAAPIRVVCHMAFDHIYPAGQSKALQQLINLGVTRLLTHGGPTQSNL
                     FDNLPQLAKWVRQSKGQIEIMPGGGLNYENLDALLELFPFQEVHGTHIVKT"
     gene            complement(13018..14139)
                     /gene="ald"
                     /locus_tag="PTC28_000576"
     CDS             complement(13018..14139)
                     /gene="ald"
                     /locus_tag="PTC28_000576"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HDK5715894.1"
                     /translation="MRIGIPKEIKNNENRVGLSPSGVHALVEAGHEVLVETAAGEGSY
                     FEDMDYVQAGANIVNSQDDVWNVDMVIKVKEPLKEEYEYFREGLILFTYLHLANEPEL
                     TKALIDKKVVAIAYETVQLGDRSLPLLTPMSEVAGRMSTQIGAQFLQRFNGGMGILLG
                     GIPGVPKGKVTIIGGGQAGTNAARIALGLGADVTILDVNPKRLQELEDLFDGRVHTIM
                     SNPLNIESHVVESDLVIGAVLIPGAKAPKLVTEDMIKKMKSGSVVVDIAIDQGGIFET
                     TDKISTHDDPTYIKHGVVHYAVANMPGAVPRTSTIGLNNATLPYALQIASKGYQRALT
                     ENVPLSHGLNVFNGHVTNKAVAEAFNYDYTPVAQVLTEA"
     gene            14287..14790
                     /locus_tag="PTC28_000577"
     CDS             14287..14790
                     /locus_tag="PTC28_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDK5715895.1"
                     /translation="MYMYKNILIAVDGSHEAEWAFNKAVAVAKRNNAKLIIVNVIDSR
                     TYTSFEVYDSHFTEKSKSFAEKLLDGYRQVAQDEGIQNVETRLEFGSPKSVLPKLASD
                     ENSDVDLVMCGTSGLNAVERFIVGSVSEAIVRHSACDVLVVRTEQIPENFEPKVATDE
                     LLKDFSI"
     gene            complement(15050..16252)
                     /locus_tag="PTC28_000578"
     CDS             complement(15050..16252)
                     /locus_tag="PTC28_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HDK5715896.1"
                     /translation="MSKLILAINAGSSSLKFQLIEMPEEKLITKGLVERIGLKDSIFT
                     IEVNGEKIKEVQDIKDHEQAVNMMLESLQKHGVINDINEIDGTGHRVVHGGELFPESA
                     LVTDDVIKDIEKLTDLAPLHNPANLMGIQAFRKLLPEIPHVAIFDTSFHQTMPESAYL
                     YSLPYDYYKKYGIRKYGFHGTSHKYVSQRAAEMLGKPIEELRIISCHIGNGASIAAID
                     GGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPFLMEKTGKTADEVLNILNKESGLLGI
                     TGTSSDLRDIEDDAKNGEERAELALEVFASRIHKYMGSYATRMHGVDVIIFTAGVGEN
                     SDAVRARVLEGLEFMGVYWDPRKNEGLRGKEAELNYPHSPVKVLVIPTNEEVMIARDV
                     MTFGELEG"
     gene            complement(16331..17278)
                     /locus_tag="PTC28_000579"
     CDS             complement(16331..17278)
                     /locus_tag="PTC28_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017722135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDK5715897.1"
                     /translation="MTESTSIMETLFHQLDERTQNLNEENGQSFIENLGLAMEQLYTS
                     ERDMLEQATLQDRRKAFQFAYLNQLQKEEVQANHQITPDSIGLILGFLVSQFKEGTKE
                     LHIADLGSGTGHLSATVHEVMSDFTIMHHLVEVDPVLSRVSVHLANFLEIPFDVYPQD
                     AIMPLPFDGADVVIGDLPIGYYPNDARSEQLQLGFDEGHSFAHHLFIEQAIEAVKPSG
                     YAFLVVPSQLFEGDYVKQLENFIATETEMQAFLNLPKTLFKSERAQKSILILQRKEHN
                     VTKPVEVLLANIPDFKNPQNFQQFLSELKTWLSQNQPKN"
     gene            complement(17486..17980)
                     /gene="tpx"
                     /locus_tag="PTC28_000580"
     CDS             complement(17486..17980)
                     /gene="tpx"
                     /locus_tag="PTC28_000580"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002446674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HDK5715898.1"
                     /translation="MAQITFKQNPVELLGQEVNIGDQAPDFTVVDNNLQPVTLATYEG
                     KKKLVNVVPSLDTGVCDQQTRKFNEEASTEDGYVLTISMDLPFAQQRWCASSGLDNVI
                     TLSDYQSRSFGQNYGVMMDGLQLLARSVFVLDENNKVVYKEIVAEGTDFPNFEAALEA
                     YRNI"
     gene            complement(18044..18628)
                     /locus_tag="PTC28_000581"
     CDS             complement(18044..18628)
                     /locus_tag="PTC28_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HDK5715899.1"
                     /translation="MQHSNEFNYNPSQPRPEMSRPMNSHRAEGLATQTIEKHRYELDA
                     FFYAGFGRRFLSYIIDLAILWGVTQIVLNPIYGLTGIDSWKLWIDKFSLGHMLDVLIY
                     FGYFVLMTKYFQQTVGKMIVGIKVYHRKLTRLNWSDVLMREWIGRIISNVFFGLPYLA
                     VLFTPKHIGVHDYFADTVVVKNKYLHYIKETEGI"
     gene            complement(18638..19630)
                     /gene="sppA"
                     /locus_tag="PTC28_000582"
     CDS             complement(18638..19630)
                     /gene="sppA"
                     /locus_tag="PTC28_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HDK5715900.1"
                     /translation="MSKRIIAIILASVIVLGGILMSAMTTVVSSLMSGDFNINKEATS
                     TVLEEGDSNKKIAEIVVEGEIIDTGASGGLFGGGAGYNHQAALKQLETIKNDDSIKGV
                     LLSVNSPGGGTYESDEFYQKIKEVKDSGKKIFVQMENLAASGGYYISAPADKIYAGPQ
                     SLTGSIGVISESKDYSELLDNLGIRTNTIKSGAHKDILSSSRKMTDEEREILQSINKD
                     SFDQFVNVVKEGRQMSESKVRELADGRIYSAQQAKSNGLIDAIGYKDKTLKDLKKAIK
                     VENPEIITFDPEESNLTSFLGMKSFINGLRAELKDVKSIINNESQTRPMYKYEG"
     gene            complement(19788..20561)
                     /locus_tag="PTC28_000583"
     CDS             complement(19788..20561)
                     /locus_tag="PTC28_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HDK5715901.1"
                     /translation="MILEWDGTLILIIISLGFLAAFIDAVVGGGGLISIPALLAIGMP
                     PAVALGTNKLASAFGSLTSAIRFIRSGKVDLAIVAKLFPLSFITSILGAIVAVYLPAE
                     LLKPIVIAILSMVLVYTLLKKDWGSIRTYTTLPLYKMILFTCLIVVIGFYDGFLGGGT
                     GSFLLFVFLLLGFDFLSAAGNAKVLNFASNLGALLLFIYLGRVDYVYGLSMGVSMIAG
                     SYVGAIFALKKGVSYVRILFVIVTVVLILKNVWDYISTH"
     gene            complement(20577..21797)
                     /gene="thiI"
                     /locus_tag="PTC28_000584"
     CDS             complement(20577..21797)
                     /gene="thiI"
                     /locus_tag="PTC28_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HDK5715902.1"
                     /translation="MIYDHILVRYGELTLKGGNRKTFVSQLRSNVKRALMPLKGYEVK
                     ANRDRMYIQLEPEADIEEMMTRISKVFGVHSISPVLKLEKSMDAVYEHARLFAQNYEA
                     GDSFKIEVKRSDKNFEYETFAIQRMVGGEVLKSNTSLHVDVRQPDHEIKVEVRLDAIY
                     MYDRIIPAIGGLPVGTGGKTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFHSPPFTSEK
                     AKEKVIELTRIMAERVGSIRLHIVPFTEVQKQIHKVVHERYTMTSTRRMMLRIADKVV
                     YQIGADAIVNGENLGQVASQTLKSMYAINAVTNTPILRPLLSLDKEEIVQKAKDIGTF
                     ETSIQPYEDCCTIFTPKNPVTEPQFEKVLQYESGFDFEEMIDRAVGNIETIVIDKNYQ
                     THQDEQNTWDDDLF"
     gene            complement(21794..22930)
                     /locus_tag="PTC28_000585"
     CDS             complement(21794..22930)
                     /locus_tag="PTC28_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HDK5715903.1"
                     /translation="MLYFDNAATTKPDPSVLSSFMKVNEKFFYNPNSPHQKGQEVERL
                     LQNARDQIKSTLKLNDETLIFTSGATESNNMALKGAAHQKKHFGRTIITSLLEHPSVL
                     EVMRELEREGFILKYVNVTTEGRIDIDDLKSLLTNDVILVTCMQVNNIMGQMQPIEEI
                     VESLKPYPKVHFHVDAVQALGKWPIQMTGIDSLSLSGHKFNGLKGQGLLILKNLHQIY
                     PIIQGGGQEFGLRSGTVNVASDVALAKAIRLAEDQRAFLIQTLSTFTTALREMIQDYP
                     GVVINSPVDASPHILNLAFPGVRGEVLVNAFSKQGIMISTTSACSSKHSNVNEVLKAM
                     NISVSRILGSIRLSFDRHTTMQDIETFKVAFHQVYREVEELLEK"
     gene            complement(23155..24855)
                     /gene="ezrA"
                     /locus_tag="PTC28_000586"
     CDS             complement(23155..24855)
                     /gene="ezrA"
                     /locus_tag="PTC28_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009381937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation ring formation regulator EzrA"
                     /protein_id="HDK5715904.1"
                     /translation="MALYIILAIIIVILIAIGVLFYMRSNKRSIIQSAEERREKLNAL
                     SYDESLEKLKTLHLSGETKNQYDTLNQSWTDTTNNYLAPVDEKIHEAEMNLDKFKFSL
                     AQTDIDDAHALMDQYEAKHQELISQADEVYDMHQQSDEIYERSKNEYRKLKRDVLANR
                     HQYGESASLLEKEIEGFEPEFEVYETLKAEGNYQEAHTHIQGLDQDIAYLKEDMSEIP
                     DLMREAQKELPGQFQDIKYGVRDLKVEGYDLDHVKVDSTLQDLKTELSFVEPMISRLE
                     LDEANDKLAQINDRLDDMYDLIEHEVKSKNAVEESKERITNDLFHAKDMNYTLQTEIE
                     YVRENYYINESDVQSVRQFENEIQNLISVYDEILSEMAKSSVRYSEVQDNLKYIEDHV
                     EVINTKQEKLQNHLVSLREDEAEAEEHILRVQSKKEEIYRRLLASNLTSVPERFIILK
                     NEIDYEVRDVNKRFSERPINVQQLKDKVNKVVLQMNKFEDEANDVLINAVYAERLIQY
                     GNRYRKDNHDLDKSLNEAERLFKNNRYKRSSEISEQALEQLEPGIAQHIEREVLEQQS
                     "
     gene            25038..25493
                     /locus_tag="PTC28_000587"
     CDS             25038..25493
                     /locus_tag="PTC28_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HDK5715905.1"
                     /translation="MTETTDYHLLSRQLDAMLDGETDLIANLSNASALLNENLSQINW
                     VGFYLMKDEALILGPFQGKPACVHIEVGKGVCGTAVAKNQTQRVADVHAFPGHIACDA
                     NSQSEIVIPIHKGSEVIGVLDIDAPIPARFSEADEAGLEDVVKVLETHL"
     gene            25728..26330
                     /gene="rpsD"
                     /locus_tag="PTC28_000588"
     CDS             25728..26330
                     /gene="rpsD"
                     /locus_tag="PTC28_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HDK5715906.1"
                     /translation="MARFRGSSWKKSRRLGISLSGTGKELDKRPYAPGQHGPTQRKKL
                     SEYGLQLREKQKLRYLYGMTERQFRNTFQTAGKQGGVHGENFMILLASRLDAIVYALG
                     LARTRRQARQLVGHGHVEVDGKRVDIPSYTLKPGQVVTVREKSRKLAIIEESVEINNF
                     VPDYLDFDADNLTGTFVRLPERSELPAEINEQLIVEYYSR"
     gene            complement(26384..26635)
                     /locus_tag="PTC28_000589"
     CDS             complement(26384..26635)
                     /locus_tag="PTC28_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715907.1"
                     /translation="MMKFNLKFNLQFFADDTASGGGTSSPTEATQTKVALGETKLKDK
                     HTGIVKTVTDAKSYVTPALITDDAIYMEGRFVSHLMIHF"
     gene            complement(26650..27219)
                     /locus_tag="PTC28_000590"
     CDS             complement(26650..27219)
                     /locus_tag="PTC28_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4355 domain-containing protein"
                     /protein_id="HDK5715908.1"
                     /translation="MKEQWLKLSLQFFSDAGTEEAVSDENVETEPTQEVEELSESQMK
                     LVNDRVNKELHRRTKEMRQQIQDELTEKQKEADKLRKMNAEQKHQYELEKAEKERDDY
                     KQQLESYKMRQEAMAMFNEAGMQAPESLLKMVVQDTAEATKEAVDSFVSMVNQEVQRQ
                     LESKATQNHVVGNHVEAPKTDEAWKTFLN"
     gene            complement(27403..27600)
                     /locus_tag="PTC28_000591"
     CDS             complement(27403..27600)
                     /locus_tag="PTC28_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LSM domain protein"
                     /protein_id="HDK5715909.1"
                     /translation="MKLWTYVDKNVRVILKNGKEFNGRVSGYDDEVANDNGEDCIYLD
                     VGMELLYEFRESEIKSIEVLD"
     gene            complement(27603..27977)
                     /locus_tag="PTC28_000592"
     CDS             complement(27603..27977)
                     /locus_tag="PTC28_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715910.1"
                     /translation="MAFLLLHNYTDFIKIKVELNPNKQNRHQLGHKLYEDYKKKNLQK
                     GLPIPSYTELDNNELNSFIQQKTGSGRLIASDTGEWRNKEVIDFGKDIGKVNINGKFI
                     TTKWGIVHYSKTGTHVIPKKED"
     gene            28040..29212
                     /locus_tag="PTC28_000593"
     CDS             28040..29212
                     /locus_tag="PTC28_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032495458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS256-like element IS256 family transposase"
                     /protein_id="HDK5715911.1"
                     /translation="MTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTE
                     YIQAKEYERTENRQSQRNGYYERSFTTRVGTLELKVPRTRDGHFSPTVFERYQRNEKA
                     LMASMLEMYVSGVSTRKVSKIVEELCGKSVSKSFVSSLTEQLEPMVNEWQNRLLSEKN
                     YPYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIGFMIQSGESEETWTTFFEY
                     LKERGLQGTELVISDAHKGLVSAIRKSFTNVSWQRCQVHFLRNIFTTIPKKNSKSFRE
                     AVKGIFKFTDINLAREAKNRLIHDYIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRL
                     KSTNLIERLNQEVRRREKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK"
BASE COUNT         8832 a         6184 c         4844 g         9413 t
ORIGIN      
        1 ttcacatact attatagatg acacaattat ttttgtatat caatatagaa cgtaacgatt
       61 cattgccata ttgaaaatgg tgaatcgtgc aggatatgcc tattgagtgc aatgattaat
      121 tcacttgatg acttgactgc cctttcatca aacagttcaa ttcaaaatta atagcctcta
      181 taagcaaaac aagtatatca aaaaatagta tgaagtctca taattcagag acttcatact
      241 atgcttttta catagactta ttcaacaaac gaaccaatat tgcggaattt ttcaaaacga
      301 tcttctttaa tatcagtagg tgtcatatgt tcaaacgatg ctaaatgctt ggtaaacttt
      361 tgcttaatgc gtttcgctaa catctcaacg tcatgatgcg cgccacctaa cggctctttc
      421 accacttcgt caataatgtt taattctagc aaatcgtatg ctgttatttt catcgtttct
      481 gcagcaattt tagccagaga actgtctttc cataaaatac cagccgcgcc ttctggtgaa
      541 atgacagagt atgtactgtt ttctaacatc aataaacgat tactcacacc aagacctaat
      601 gcgccaccgc ttccaccttc accaatcaca attgaaatga caggtacagt taaccctgcc
      661 attgaaacaa ggttacgtgc aattgactcg ctttgaccac gttcttcggc tgctttacct
      721 ggatatgcgc ctttcgtatc aataaatgta aaaataggac gattaaactt ctcggcttct
      781 ttcatcaatc tcaacgcttt tcgataacct tcagggtgcg ccataccaaa gttacggtaa
      841 atattatctt tcgtatcttt accgcgctgt tgaccaatca ctgtcacagg ttgaccattg
      901 aaataggcta atccccctac gatagctggg tcatctctaa agttacgatc gccatgtaat
      961 tcgataaaat catcaaaaat gtatggaata tagtcgagta cagtcggtct ttcaggtaat
     1021 cttgctattt gaacacgatc ccacggtttt aaggaagtgt aaatcttttc tttttctgtt
     1081 tgcaatgcgg cttcaagaat ttcgatttca tctgataaat cgacatcatt tttcgcttgc
     1141 gtttctttca atgattcaat tttagtttgt atgtcttgga tcggtttttc aaaatcaagc
     1201 attacttttc cacctcacga tgcatatcaa ataacgtcgc taacgttttc ttcatttcac
     1261 tacgatgcac aactttatca agctgaccat gttctaataa aaactcagcc gtttggaaat
     1321 catcaggtaa tttttcatta atcgtctgct cgataacacg tcggcctgca aacccgatta
     1381 aggctttcgg ttctgccaag ttaatatcac ctactgatgc aaaacttgca gatacaccac
     1441 ctgttgtcgg atgtgtcata taggaaatga ataatagacc tgcatcagag tgtttttcta
     1501 acgatacact tgttttagcc atttgcatga gcgaaataat tccttcttgc atacgtgccc
     1561 caccagaagc cgtaaataag acgaatggga gtcgctcttc tgtacaatga tcgacaatac
     1621 gacaaatttt ttcaccgact acagaaccca tactccccat tctaaatctc gggtccatga
     1681 cgccaatacc aaacttaatg ccattgagtt ctgcagttcc agtgacgatc gcttcattta
     1741 atcctgtttt ctcttggtct ttttcaacct tttcttcata gccaggaaag tttaacggat
     1801 ttgcagaggt catcccttta tcaaattctt caaaagttcc attatcggca attgcttcaa
     1861 tacggccata agctgataat tgaatatgat gatcacaatt aaaacataca tttaaatttt
     1921 cagtgagctc ttttgtgtac attatttttt tacagtttgg acatttcgtc attatgcctt
     1981 caggaacttc attttgtttc gaatcttgaa ccgtaacata ttttttcttt ttagaattac
     2041 ggttaaaaaa gtctttaaac atctttatta cctccacttt tccatgggct atcaatcaag
     2101 cttgtattat ttctttaaat ctgtgagtga taacgtcttc tcatatacat cgtctgggtc
     2161 gacttcgata cgggctaccc ctgattccat cgctgcacgt gctacttctc gtgctacaga
     2221 cggcgcaaca cgataatcga acggaccagg aataacgtaa tctgggttgc gctcttcatc
     2281 cgtaattaag ttagcaatcg cttcaacagc tgcacgtttc atttcttcat tgatatgagt
     2341 cgcacgtaca tctaatgcac cacggaaaat acctgggaat gccaatacat tattaatttg
     2401 gtttggaaag tctgaacgtc ctgtaccaat aactttagca cctgcatgct tagctttgtc
     2461 tggcgtgatt tcagggtttg ggtttgccat tgcgaaaata atagcatcat cattcataga
     2521 ctggaccatt tcttcagaga gtgcatctgc aactgagaca ccgatgaaaa catctgcgtc
     2581 ttcgatgaca tcaaccaatt ttccttcaat tttatcttta ttcgtccatt tcgctacagt
     2641 atctttcgtt tcattcatcc catatggacg tccttcataa atggcacctt tagaatcaca
     2701 cataatcata tgacgtacac catatgaata aagtaattta acaatcgcaa taccggcagc
     2761 acccgcaccg ttaagtacta ctttaatatc cgctaagtct ttatcaacaa tacgtaatgc
     2821 attgactaaa ccggctactg ttacgatagc cgtaccatgc tgatcatcat gaaaaactgg
     2881 aattcttgtc tcttttttca ggcgttcttc aatttcaaaa caacgcggtg cagaaatgtc
     2941 ctctaaattg acaccgccaa agttaggttc cacgagtttc actgtacgga taatttcttc
     3001 tgtgtcattc gttgcaagtg acaatgggaa ggcatcaacg cctgcgaaac ttttgaacag
     3061 tacagctttt ccctccataa ccgggatact cgcttcagca ccgatatttc cgagtccgag
     3121 aacagccgta ccatctgaaa taacggccac catgttactt ttcattgtat aatcataaac
     3181 acgactcggt ctttcatgta tatctttaca aggttcagct acacctggag aataggctaa
     3241 gcttaattcc tctttattcg ttaccttaac ttttggacta acggctaatt ttccatgatt
     3301 ttctttatgc atttgcagtg catcatctct taaggacatt cataatcatc tcccattttc
     3361 aaattccaac tattttttaa gtcctctttt aatcgccatt ataccatagc acattatatc
     3421 cgtatatcaa agtcaggttt aacgcttaca tcatcactta cccgtgcaaa ataccatagc
     3481 attataacaa acggatatgt tcaggtttaa tcgagtctaa aagtgcatct aaatagagat
     3541 ttggttgcaa taaataacct ttaaatagaa attgattgtt gctttcttga tattggtaca
     3601 cagcgatatt gttgttcgat tgtttttggg ttaaatactg ttgctctagt gtatcagtca
     3661 taccttctct aatgacaatt ttgcgcgttt gctgtctttt ttctatttca aaagcttcta
     3721 aagtcgtcaa tcggttgata atcaattgaa gtttatcatt tctcttttcg aacttgcccc
     3781 aaatgatata aaactttgat gtctccaaag ttccggttaa ttgctgatac gtttttggga
     3841 agatgacacc gtccattgtc gttatgccgt cattcaactc aacaaacgcc atctgttgac
     3901 cttgtttcgt tcgaatgact cgtacagcat ctaatgtaac taaaataggt tggtgcgtga
     3961 catgtgcttg aagttgaaaa ataccaagat attgtttttg cttaaacgcc ttttcaacag
     4021 gatgtgcagt cacgtaaaag cctaaatact gcttttcgaa atcacttaat tgttgactcg
     4081 gcatttcttc agtttccgca tattcttgtt taatggttgc aacactggcc agaagatcgg
     4141 tatcaatact gacatctgta tctgacacct tatcaattga ttgtaataag gtcgcacggt
     4201 tcttgccaaa acaatccatc gcacctgtca aaatcaatgc ttctaatgta cgtcgtgatc
     4261 ttaagcgact gggaattcga ttacagaaat caaagaagtc tttgtaaggc ccctgttcac
     4321 gtctttcatt cattatcgtt tgtaccgttt gataaccgac acctttaatc gcacctaatg
     4381 aaatatagac gccctcttgt gtcgcaacat aacgccattg acttttgtta atatgcggac
     4441 cgtgaattgt aatgtgctgc tgtttcgcct cttgaatcat catgtttgtt ttcgtgtcat
     4501 taccaatcac gttgcttaaa atgttcgcat aaaaataagc aggataatgc acttttaaat
     4561 aggtcatgat gtatgcaatc ttagaataac ttaccgcgtg cgcacgtgga aaaccgtagt
     4621 ccgcaaattt taagattaaa tcaaaaattt gaccacttaa cgtctcagca tagccttttt
     4681 cttttgcacc atcaataaaa tgttgccgtt cattttcaag gacttctcta ttctttttac
     4741 tcatggcacg ccgtaaaata tccgcttcac cataagaaaa tcctgcaaac tgactcgcaa
     4801 tttgcatgat ctgctcttgg taaataatca ctccatatgt acgtttcaaa atcggcgcca
     4861 aatctggatg caaatacgta acttgacttg gatcgtgccg acgacgaatg taggtcggaa
     4921 tttcttccat tgggcccggt cgataaagag acgtcaccgc aacgatatct tcaaaatgtt
     4981 cgggctgtaa tttttgtaaa acacgtcgca caccttcaga ctcaagttgg aaaattcctg
     5041 tcgtatcgcc acgtgacaat agttcaaaga cgtgtacatc atcaaaagga atttgttcaa
     5101 catcgatgtc aacttttaaa tcacgcgcca cttgtttgat gatttgatga ataatcgtta
     5161 agtttcgcag tcctaaaaag tcgattttta ataaaccaat gcgttctgct tctgtcatcg
     5221 tccattgtgt cagcaaacct gtctcgcctt ctgttaacgg gatagattga tatagcggtt
     5281 ggtcgttcac aatgacacct gccgcatgcg tcgacgtatt tcgcggtaac ccttctaact
     5341 ttttacaata ctcaaaccac cgttcatgac gatgattgcg atggacaaat gctttaaaac
     5401 gttcttcttt ataggcctca tccaatgtga ctcccagttt actaggaatt aatttagaag
     5461 cttcacttaa cgtcgtttca tcaaagccca tcacgcgccc cacatctcgt gcgacggctt
     5521 tcgcaagtag atggccaaac gtcacaatac ctgcaacacg gtaatcacca tacttttgtt
     5581 ggacataatg aatcactttt tcacgttgcg tatcctcaaa gtcaatatcg atatctggca
     5641 tcgtcacacg ctcaggattt agaaaacgtt caaacagtaa atcatattga agcgggtcaa
     5701 ttgtcgtgat atttaataaa taactcacta atgaacccgc tgaagagccc cgtcctggac
     5761 cgaccatgac accatttgat ttggcataac gaattaaatc actcacaatt aaaaagtaat
     5821 ccgcgtaccc catctgtgtg atgacgtcat attcatattt taaacgttta cgatagcgcg
     5881 cttctgtcag tccaaaatcc gcaagtgcac gttctaactc ggcccataag tatgcatttg
     5941 ctgaactacc gtctggcgtt acaaattcgg gcaacaaagc ttgatgatac tcgagtttag
     6001 catcacacat attcgcaatt tcatctgtac gtgcgagcca tgcttccgca aattgcgaat
     6061 catacaatgc accgacatca tatatatgtt ctgttggtgt ttcgtgtgaa tccaccaaat
     6121 tgactttcgt attatcacga atcgcatgta acacttttaa cgcattttta tcttctgcct
     6181 tttcataata cgccgcctgc atcaaaactt tgggcaactc acaatcctcg gccgattgat
     6241 ggtctgtaaa acatgttacc ccgtcaggca tttcttcatg ccaatgcttt tcttggttcg
     6301 tcatctgctt aaaaataacg accgtatcat taaacaaatc tttcttttca taaatggata
     6361 catgtttaat tcgatttact ttaatatcag atgacaattt aaataagttt tgcaacccct
     6421 cattattttt agcaatgact accgcttcta gcacattcaa ttgatcagtg aggtaaacag
     6481 tcatccctaa taaaggttta atgccatgct gaatacacgc gtcataaaac tgcggcacac
     6541 catacatgac attcaagtcg gtaatcgcga tggctgaata tcctaattca attgtgcgct
     6601 gaacggcccc ttcgatcgta atactcgaat tcaaaaggtc ataagccgta tgaatattta
     6661 aatgtgcaac catcgttaag tcaccttctt taacctgtta tagtttttgg cggagcgctt
     6721 cggtaagtga ttcaaattca tcccatgtat ggacagacac acctgaagca tttggatgtc
     6781 cacccccacc aaagtcagcc gcaacatcat taatcgtaat ctcttttgaa cggatgcgac
     6841 aacggatttc ttcaccttcg tctaccgcaa atatccaaat tttcaagcct tttaaatcgg
     6901 caattgcatt cacatacaac gacgcttcat tcggttggat atcaaatttt tctaacacgt
     6961 catgcgtaat tttcacctgg caaaaaccat cttcaaaaag ttggaaattt tgcagtacat
     7021 agccatgaaa cggcattaac cgtggatcct tttcgcccaa ctgatttaat agacggttgt
     7081 gttgaatatc atattgtaac aactgacttg cgatggtcat cgttttcggc gatgtattgt
     7141 tgaagaaaaa gcgacctgta tcgccaacaa tacctaaata taacgcactc gcaattttgt
     7201 cgttcattaa agctaaatca tttgaacctt gtatcaaatc gaaaatcatc tcactagtag
     7261 atgaagcact cacatcaaca tcattgattt ccgcatatga atctacaggg ggatgatggt
     7321 cgattttaat taatgcgttg ccgcgatcgt aacgagcatc gtcaatacga gcggcgtttg
     7381 ctgtgtcaca tacaatgaca agtgcatcgt catattgcgc atcatcaatc gtatcaaacg
     7441 ttcccataaa tccaagtgtc ggttcttccg ttccaacagc atagacattt ttagttggat
     7501 atttcgctat gaggtattct ttcaatccaa actgcgaccc taatgcatct gggtcaggtc
     7561 ggacatgacg gtgaataata atcgtgtcat attgttgaat ttgttcttga atttctggaa
     7621 taaatttcat actcaacgct ccttaatgat ctaataattg gcacataatt aatgcttttg
     7681 caacaggctg gttcgcactg aacatcgtta cttctaattt cgcaaaatta cgtcccatat
     7741 ctaaaatggt ataatccact tctacttcac tttcaatttg tacagttcga atataaaaga
     7801 tatttaaact ctcaatcatc acttctaact ttttatgttt gcgcattaca gatttaatcg
     7861 tttcttcaat gatagcgacc gatacagatt tactcaatgt gccgaattga tttgtcagtt
     7921 gcggtgtaat ttcgacaatg atttgttgat tgcgaatctc aatatgtttc gccacttgat
     7981 cattaatcgt ttcgcctact tgtggctgtc gcccgacaat ttgcatcgct ttcagtacat
     8041 cttcacgtga aataacgccg acaagttgtt tttgatttcc tgtaactggc agtaattcaa
     8101 taccctccca gatcatcaaa tgcgcacaac tcgccaccgt cgtactcagc tggacactaa
     8161 tcgcgggttt cgtcatgaca cgataaagtt tttcgtccaa atctttgccg ataatgtctt
     8221 tactagtaat taaacccgct aatttgttct gacggtccac aattggaaaa cgagaatgtg
     8281 acgtttctcg agatttttta cctacatcag caacagtcat ttcatcgtat aaaaaagaag
     8341 tctgttcgat tggaatcacg atatcttcaa cgactaaaat ctctttttta atcatctgat
     8401 tgtacatcgc tctattaata atattcgcaa ccataaatgt atcataattg gaagaaatga
     8461 taggtagatt ttgttcatct gccattttct taatttcgtc cgtcgtatca aaaccacctg
     8521 taatcaagac ggcactgccc cgttctaacg cagctttttg aacatcaaga cgatttccga
     8581 caatcagcaa cgtattttta gagacatagt taacgacatt gtctagctcc atcgctccta
     8641 tcgcaaattt agtcagtgaa ttgaactgac cgcctttacc accaattaaa tggccatcaa
     8701 caattttcgc tatttctcca aatgttagat gatcgacttt ggcacgcgct ttcttttcaa
     8761 tacggactgt accaacacga tcaatcgaag ccactaaccc acgttgcccc gcatctttaa
     8821 tcgcacgata tgccgtccct tctgaaacgt ccaaatcttt cgctatttta cggactgaaa
     8881 ttttttggcc tacagataat gattcaatgt gtttaataat ttgttcgtgc tttgtcatgt
     8941 atctccctct attgttatgt catatcacta aacgatgtga tgtctctgaa taaaagatag
     9001 tgattcatct ttaagtagat accccttgat tgatttgtga gctacttcta aattcccatg
     9061 tcatcaattt tatttctttt tcttttatta taacgttttt caaatcgtaa tgcgaagtga
     9121 taaccaataa atgtttaact cctttttaaa ccggttaaaa tagtgacggt ttaagatgtt
     9181 cgatgttaaa gcgcattgct tcatatgtat tgaatcactt ttaccgatat ttttgttaca
     9241 ctagttttaa ggaggatgat agagatgcat caaaatattt tacttgcagt ggatacagat
     9301 ttaaaaaatg cgaaagcgct ccaagaagtt gttaaaattt caggcgacag ctccgttgtg
     9361 acattgctca atatcatcgg agaacaagac gtccaagctt ctgttaaaat ggggacacat
     9421 tatgaagaac ttaaacaaat gcgtcacgaa caaatgaaac cgacacgtga cacattagaa
     9481 caaaatggtt tgcaatatga agaaattatc gaacgtggca atccaaaaga aaaaatcgta
     9541 aactatgcga acagcggtca atacgatatc gtcgtgctca gtaatcgtaa agcagaagca
     9601 gcgaagaagt tcgtattagg tagcgtgagc cataaagtcg caaaacgcgc caaaatacca
     9661 gtgttaatcg taaagtaaaa tcaacacagc aaactaacgt aatccattca acctataaaa
     9721 actgaatgat tcttatgcgc cacattatta aatcacaatc aatcaagggg ttcggacaaa
     9781 tcaacgtcca gccccctttt tattatgtat caattaacta ttgtagcaaa tgtgttttaa
     9841 catcaaaaaa caatatttac attaaagttc tttaattgca aaaacagatt cgactcacgc
     9901 atatatgaat tgttatgtaa ccgacatttc ctaaaatacg caaagtttat gacccaaaaa
     9961 taaaaaagat tgtgagcact attcttcaat tccactcaga tgtttgacta aaggttaggc
    10021 gcttgggtga cactcctgag aaatgagtta acagcattta actttaaaag tgactaccgt
    10081 ttaacgcagt agctacctga cttttcaatg catacccttt tgagaagtct actcagcctt
    10141 gcgggggcca gaccagcgcc taggaaagat agcccaaata agctacacca tcagtcaaaa
    10201 ctttcattaa tgaagaatag ttctacagtc tttcgtttaa cacgctttgt aatgagctca
    10261 aattgttata taagctgtat aaaaacaacc tctatagttc aacaacgcca ccaggtttga
    10321 caatttgcac ttccccgaca ttcacaagct ttttaaacgc ttctggatct tgttcaatca
    10381 atgggaaggt attataatga atcggcacag tcaacttagg ttggatgaat tcattaatcg
    10441 cataacttgc atcttcaata cccatagtaa aattatcacc aattggtaca aagcatacat
    10501 caacaggatg acgatcagca attaatttca tgtcgctgaa taagcctgta tcacctgtat
    10561 gataaatcgt tttaccttct aattctaaaa tgacacccat cggcatacct aagtacatcg
    10621 gaataccatt gtcatctgtt aaacttgaac tgtgaaacgc ttgaacaaat ttaacgacac
    10681 caaaatcaaa tgtccatttc cctccaatat tcatagggtg tacattttca acgccttggt
    10741 ttgtagataa ataattcgcc atttcagctg agccaatgac tgttgcgtta ttacgcttag
    10801 caatttcaat cgtatctcca aaatgatctt cgtgaccgtg tgttaaaatc acgtagtcta
    10861 cttttaaatc ctcaacattt aaatctgttt gtccatttcc tgtaataaac ggatcaataa
    10921 tacctgattc cccatttgct tcaaaatata cagtcgattg accatgaaaa gataatttca
    10981 tgttcgcatc ctccttcatc atgtgtaatg cagattccta actttatatt aacaggggct
    11041 tcaacataaa tctaaaattt acaactagca cccccatatt taaagtgctt tttataatac
    11101 ttatttctaa aaaacaaaat aacttctgct atttttattc acttcaccaa tacgatttaa
    11161 acatcaaagc gtgcgcactt tgcattctca aatcaactga cttaaaatga atatgaagaa
    11221 ataaaggagg cgtttttatg tcaaaaatag aacaactcgt tcaaacatta aaggagcaac
    11281 aagcagatgc gatgtgggtg tccaacccga ttaacatctt ctatttgact ggctataaat
    11341 ctgaaccaca tgaacgatta ttcgcattac ttgttcgagc agatggccaa caaattttat
    11401 tctgccctca actcgaagta gaggaagtga aaacctctcc atttactggt gacatcatcg
    11461 gctacttaga cactgaaaat cctttcgata agcatcgtga aacgtacgga acattattga
    11521 ttgaagaaaa tcatttaacg gtacaacgct atcacgccct taaaaatgcc ttttctgtgc
    11581 atacttttga agctgctgac cctatcattc gcgcgttacg taacgttaaa acagcagacg
    11641 aaatcgacac tttaagacaa gctgcaaaat tagcggataa atgtatggaa atcggtgtgg
    11701 catttttaaa agaaggtgtc acagaacgag aagttgtaaa tcatattgaa aatgaaataa
    11761 aaaaatacgg agtcaatgaa atgagttttg acacaatggt cttatttggc gatcatgcag
    11821 cggcaccaca cggtacacct ggagaccgtc agcttaaaaa taacgaatat gtgctgtttg
    11881 acttaggcgt catttacaat cattactgca gcgatattac acgtactgtc gcttttggcc
    11941 aacctgatga taaagcacaa gccatttacg acatcgtatt aaaagcagag caaacagcaa
    12001 tccaacatat taaacctggt gtcacgatta gtgaacttga tgatattgca cgaggtatca
    12061 ttactgaagc gggatatggc gaatacttcc ctcaccgtct aggacatggc ttaggtctgg
    12121 aagcacatga ataccaagat atttcaagta cgaatcaaaa ttctcttgaa gccggtatgg
    12181 tactgacaat tgagcctggt atttatgtac cgaatgttgc gggcgtccgt atagaagatg
    12241 atattttagt cacagaagat ggctatgaat cactatcagg ttataagaaa tgattaaaga
    12301 agctgttgca tcctcattag tagaagttga agctaaatta aaagcgggcg ccaatcgaat
    12361 tgaactttgt gaaaatatgc atgaaagtgg cacaacaccg agttatggca tggttaaaat
    12421 cgccagtgat atgtgccaaa tgtatgatgc agaactggct gtgatgattc gtcctcgagg
    12481 tggggcgttt gtttacaatt ggtacgagtt cgagtcgatg caagctgaca ttcaacaact
    12541 caaaacgttg cccatcgatt atttcgtgtt cggttgttta acgactgaga gcacgttaca
    12601 tcagtttcaa atgcaaacat tgattcacct tgccgcaccg atacgtgttg tgtgtcatat
    12661 ggcatttgat catatctacc ctgccggcca atcaaaagca ttacaacaat tgatcaattt
    12721 aggtgtcaca cgattactga cgcatggtgg ccctactcaa tcaaacctat ttgataactt
    12781 accccaactc gccaaatggg ttcgtcaatc taaaggacaa attgaaatca tgccaggtgg
    12841 tggtttgaat tatgagaatt tagatgcgct attggaatta tttccttttc aagaagtgca
    12901 tgggacacat attgtaaaaa cttaaattca atattgaact tgctcatatt cattcaaaaa
    12961 gacgagtcag ggaaatgcaa catatccctg acttttttat attttagaac aatttaatta
    13021 tgcttccgtt aatacttgtg ccactggcgt ataatcataa ttgaacgctt cagcaaccgc
    13081 tttatttgtc acgtgtccat taaacacgtt taacccatgg gaaagtggta cgttttctgt
    13141 taatgcacgt tgatagcctt tacttgcaat ttgtaacgca tatggtaacg ttgcattatt
    13201 taagccaatt gtagaagtac gtggcactgc acctggcatg tttgcaacgg cataatgaac
    13261 aacaccgtgt ttaatataag ttgggtcatc atgtgttgaa attttatctg tcgtttcaaa
    13321 aataccacct tggtcaatcg cgatatcaac gacgacagaa ccagatttca ttttctttat
    13381 catgtcctca gtaactaatt tcggtgcttt tgctcccgga atcaatactg ccccaatgac
    13441 aaggtcactt tctacgacat gcgattcaat gtttaaagga ttagacataa ttgtgtgcac
    13501 acgaccatca aaaaggtctt caagttcttg caaacgtttc ggattcacgt caaggatcgt
    13561 tacatctgca ccaagtccta atgcaatacg cgccgcattt gttcctgctt gaccgccacc
    13621 gataatagtc actttacctt ttggtacacc tggaattcct ccaagtaaaa tacccatgcc
    13681 cccattgaag cgttgtaaaa attgcgcccc aatttgtgta gacatacgtc cagccacttc
    13741 gctcattggt gtgagtaaag gtaacgaacg atcaccaagt tgtaccgttt catatgcgat
    13801 agccacaact tttttatcga tgagcgcttt tgttaattca ggttcatttg ccaagtgaag
    13861 atatgtgaat aaaatgagtc cctctctaaa gtattcatat tcttctttta atggttcttt
    13921 cactttaatc accatgtcga cattccaaac atcatcttgg ctattgacga tgtttgcccc
    13981 cgcttgaaca taatccatgt cttcgaaata agagccctca cctgctgctg tttcaactaa
    14041 cacttcatgt ccagcttcta caagtgcatg tacaccactt ggggataaac cgacacgatt
    14101 ttcattattt ttaatctctt tcggaattcc aattctcata ctccttgcac ctccaaaacc
    14161 aatcataacg catacaacat gtaagcgcaa tcataacaat ttttgatttt ttagttcata
    14221 taaatttcac ttaaatttag aaatgatatg ttataataaa ggcgaaataa gaaaggggtt
    14281 ttagccatgt atatgtacaa aaatatttta attgctgttg atggttctca tgaagcggaa
    14341 tgggcattta acaaagcggt tgcagttgca aaacgtaata atgccaaact gattatcgtg
    14401 aatgtcatcg attcaagaac ttacacatct tttgaagttt atgattcaca cttcactgaa
    14461 aagtctaaat catttgcaga aaaattattg gatggctacc gtcaagtggc acaagatgaa
    14521 ggcattcaaa atgtggaaac gcgcttagaa tttggatcac ctaaatcagt tcttccaaaa
    14581 ttagcaagtg atgaaaattc agatgttgac cttgtgatgt gtggtacttc aggccttaac
    14641 gcggtagaac gttttatcgt aggttcggta tctgaagcca ttgtacgtca ttcagcatgt
    14701 gatgtattag ttgtacgtac tgagcaaatt ccagaaaact tcgaaccaaa agtagcaaca
    14761 gacgaactat taaaagattt cagcatttaa ttaaacccta tagcaaacat ttgaatggat
    14821 atgggacatc aattttagtc tcctattcac aacaatcatc aaggcatgaa gtagttagat
    14881 gctaaaacac atcatgtaac ttcttacttc atggctaata aagaggcttg gaaattcgtt
    14941 ttcctcgtct cttttttaat gcctttcccc tttctttaca aaaaataaaa cagtacaagc
    15001 cgtgaaaata tcacaactca tactgttatt atcatacgct atttcaaaat taaccttcta
    15061 actcaccgaa agtcatcacg tcgcgtgcaa tcatcacttc ttcatttgta gggatgacta
    15121 atacttttac aggtgaatgt gggtagttga gctcagcttc tttaccacgt aatccttcat
    15181 ttttacgtgg atcccaataa acgcccataa attccaaacc ttctaataca cgcgcacgca
    15241 ctgcatctga gttttcacct acaccggcag taaagatgat cacatcgacg ccatgcatac
    15301 gtgttgcata tgaacccatg tatttatgga tgcgtgatgc aaatacttct aacgctaact
    15361 ctgcacgttc ttctccattt ttcgcatcgt cttcgatatc acgtaaatct gaagacgttc
    15421 cagtgatacc taataaacct gattctttgt ttaaaatatt aagtacttca tcagccgttt
    15481 tacctgtttt ctccatcaag aatggaatta atgcagggtc aatattacct gaacgtgtac
    15541 ccattgtcac acctgctaat ggtgtaaagc ccattgacgt gtcgattgat ttaccgccat
    15601 cgattgcagc aattgaagca ccgttaccaa tatgacatga aataatacgt aattcctcaa
    15661 taggtttacc taacatttca gctgcacgtt gtgatacata tttatggctt gtaccgtgga
    15721 aaccatattt acgaatacca tattttttat agtagtcata aggtaagcta tataaatatg
    15781 ctgattcagg cattgtttgg tggaatgatg tatcaaatat agccacatga ggaatttcag
    15841 gaagcaattt tctaaatgct tgaattccca ttaagtttgc tgggttgtga agtggtgcta
    15901 agtctgttaa tttttcaatg tctttaatca catcatctgt cactaaagca gactcaggga
    15961 ataattcgcc accatgtaca acacgatgac ccgtaccatc gatttcgtta atgtcattaa
    16021 tcacgccgtg tttttgtaaa ctttctaaca tcatgtttac cgcttgttcg tgatctttaa
    16081 tatcttgtac ttctttgatt ttttcaccat tcacttcaat tgtgaaaatc gaatccttta
    16141 atccaatacg ctcaactaac cctttagtga ttaatttttc ttctggcatt tcgattaatt
    16201 gaaatttcaa tgatgaacta ccagcgttaa tcgccaaaat taattttgac atgtcaacgg
    16261 cctccaatat atatatttta ttcacatcta tttaaccatt aatacagttt gatttcaagg
    16321 gtgtaacaga ctaattttta ggttgatttt gtgacaacca agttttaagt tcagataaaa
    16381 attgttggaa gttttgtggg tttttaaaat ctggaatatt agcgagcaaa acttctacag
    16441 gcttcgtcac attatgttct ttacgttgca aaatgagaat cgatttttgt gcacgttcac
    16501 ttttaaataa tgttttcggc aagtttagga aagcttgcat ttctgtttct gtagcaataa
    16561 aattttccaa ctgttttaca tagtcgccct cgaacagttg acttggtaca acgaggaaag
    16621 cgtaccctga tggcttcacc gcttcaattg cttgttcgat aaataagtgg tgtgcaaaac
    16681 tgtgcccctc atcaaaacct aactgtagtt gttcgctacg cgcgtcattc gggtaatacc
    16741 caatcggcaa atcaccaatg acaacatccg caccatcaaa gggtaacggc ataatagcat
    16801 cttgaggata cacatcaaac ggaatttcta aaaaattcgc aaggtgtaca ctcactctag
    16861 aaaggactgg gtcaacctca actaaatggt gcatgatagt gaagtctgac atcacttcat
    16921 gaacggtagc gcttaaatgg cctgtaccgc tgcctaaatc ggcaatatgc agttctttgg
    16981 tgccttcttt aaattgcgac actaaaaacc ctaaaataag tccaatagaa tcgggagtaa
    17041 tttgatgatt agcttgaact tcctcttttt gcaattgatt caaatacgca aattgaaatg
    17101 cttttcttct atcttgaagt gtagcttgtt ctaacatatc acgttcagag gtataaagtt
    17161 gttccattgc caagcctaag ttttcaataa agctttgacc attttcttca tttaaatttt
    17221 gtgttctttc atcgagttga tggaacaatg tctccataat agaggtgctt tctgtcatca
    17281 ttcatcatcc tttcataaaa ataagggagc atttcagaag cacacactaa aaaatgtggc
    17341 ttctgaatct ccctttgttc atttcatcag cattcattga ttgaacgaca tgtcaacaga
    17401 gatagggtat gtcagaaaaa ccatacttaa agtaggttga tgctgataca gcgaatctcc
    17461 actcaacttg gtcattcacc ctcaattaaa tgttgcgata agcttcaagt gctgcttcaa
    17521 agttagggaa atccgtaccc tctgctacaa tctctttata tacgacttta ttattttcgt
    17581 ctaatacaaa tactgaacgt gctaataatt gtaaaccgtc catcatcacg ccgtagtttt
    17641 gaccaaatga acgactttga taatcactta atgtaatcac gttgtctaat ccacttgacg
    17701 cacaccatct ttgttgcgca aatggtaagt ccatagaaat cgttaatacg tacccatctt
    17761 cagtacttgc ttcttcattg aacttacgtg tttgttgatc acatacccct gtgtcaagag
    17821 aaggaacaac gttgactaat tttttcttgc cttcatatgt tgccagtgtc acaggctgta
    17881 aattattgtc tactactgtg aagtctggag cttggtcccc aatgttaacc tcttgaccta
    17941 ataattcaac agggttttgt ttaaatgtaa tttgtgccat caatagtacc tccattaaat
    18001 agattacttc cctattatat cgtgttaatc agtcgttatc acgtcatata ccttcagttt
    18061 ctttaatata atgaaggtat ttatttttaa cgacgactgt atccgcaaag taatcatgca
    18121 caccgatatg tttaggcgtg aacagtacag ctaagtatgg caagccgaaa aaaacatttg
    18181 aaatgatacg gccaatccat tctctcatta aaacatctga ccagttcaat cgcgttaact
    18241 tccggtgata cactttaatg ccgacaatca ttttaccaac tgtttgttga aagtatttcg
    18301 tcatcaatac aaagtaacca aaataaataa gtacatcaag catatgacct aagctgaatt
    18361 tatcaatcca caatttccaa ctatcgatac ctgtcagtcc ataaataggg tttaaaacaa
    18421 tttgtgtcac accccataag attgcaaggt caatgatata acttaaaaac cgtctgccaa
    18481 aacctgcata gaaaaacgca tccagttcat atcgatgttt ttcaatcgtt tgtgtcgcaa
    18541 gtccctctgc ccgatgacta ttcataggac gtgacatctc agggcggggt tgagacggat
    18601 tatagttaaa ctcatttgaa tgttgcatct caatcaccta cccttcatat ttgtacattg
    18661 gtcgtgtttg tgattcatta ttaataatgg atttcacatc tttcaactct gcacgcaatc
    18721 catttatgaa tgatttcatg cctaaaaagc tcgttaaatt actttcttca gggtcgaacg
    18781 taataatttc tgggttctca actttaatcg ctttcttcaa gtcttttaaa gtcttatctt
    18841 tataaccgat agcgtcaatc aaaccattac ttttcgcttg ttgtgcacta taaatacgtc
    18901 catctgccaa ttcacgcact tttgattcgg acatttgacg tccctcttta accacattga
    18961 caaattgatc aaaactatct ttattaatag actgtaaaat ctctctttct tcatctgtca
    19021 ttttacgaga actacttaaa atatctttat gtgcacctga tttgattgtg tttgttctaa
    19081 tgcctaagtt gtccaaaagc tctgaataat cttttgactc agaaatgaca ccaattgaac
    19141 ctgttaaaga ttgaggaccc gcataaattt tatcggctgg tgctgaaatg tagtagcctc
    19201 cagatgccgc taaattttcc atttggacaa aaatcttttt acctgaatct ttcacttctt
    19261 ttattttttg ataaaattca tcactttcat atgtaccgcc acccggacta ttaacgctga
    19321 gtaacacacc tttgatagaa tcatcatttt taatcgtttc gagttgtttt aaagccgctt
    19381 gatgattata acctgcgcca ccaccgaaca gcccaccgct cgcacctgta tcgataattt
    19441 caccttcaac gacaatttct gcaattttct tattactatc gccttcttca agtacagtac
    19501 ttgtcgcttc cttattaatg ttaaaatccc cactcataag agaggataca actgttgtca
    19561 tggcactcat taaaataccg cccagtacga tgacacttgc taatataatc gctatgatcc
    19621 tttttgacat aatcaacttc ctttcaaatg tttttcaaat ttatcataac aaaaaaatat
    19681 agtctttagg tcaaataact gtaagaaatc atttgaaatt taaaattgaa cgtaaatcaa
    19741 tagtttttga aggacatgca tcttaatcat gcacaatctc ttccttgtta atgcgttgag
    19801 atgtaatccc agacattttt taaaataagg acgacagtga cgataacaaa taagattctg
    19861 acataactga ctcctttttt tagtgcaaat atcgcgccaa cataagaccc cgcaatcata
    19921 ctgacaccca tgcttaaccc ataaacataa tcgacacggc ctaaataaat aaacaacagt
    19981 aacgcaccta agtttgaggc aaaattcaac actttcgcat tacccgcagc acttaaaaaa
    20041 tcaaagccta ataataaaaa gacgaagagt aaaaatgatc ctgtcccgcc accaagaaag
    20101 ccatcataaa agccgatgac cacaatgagg cacgtaaaca aaatcatttt atataaaggg
    20161 agcgtagtat atgtacggat actgccccaa tcttttttca ataacgtata aacgagaacc
    20221 attgacaaaa tggcaatcac aattggcttt aaaagttcag caggtaaata aactgctacg
    20281 attgcaccta aaatcgaggt gataaaggat aaagggaaca gtttagcaac aatagcgaga
    20341 tccactttac ccgagcgaat aaaacgaatc gcactcgtca atgatccgaa tgcactcgct
    20401 aatttattcg tccctaatgc aacagcgggt ggcataccaa tggcaagtaa tgcggggatc
    20461 gatattaaac cgcctccacc gactacagca tcgataaatg cagctaaaaa gcctaaacta
    20521 atgattatta aaatcagtgt cccatcccat tctaaaatca ttgtttatcc ccctttttag
    20581 aacaagtcat catcccatgt gttttgctca tcttgatggg tttggtagtt tttatcgatc
    20641 acaatggttt caatattacc taccgctcta tcaatcattt cttcaaaatc aaaaccagat
    20701 tcatattgta atactttttc aaattgcggc tctgtcactg gatttttcgg tgtgaaaatc
    20761 gtacaacaat cttcataagg ttgaatagac gtttcaaatg tgccaatatc ctttgccttt
    20821 tgcacgattt cttctttatc taatgacaat aacggacgta aaattggcgt gttcgtgacc
    20881 gcattaattg catacatact tttcaatgtt tggctagcga cttgtcctaa gttttcacca
    20941 tttacaatcg cgtcagctcc aatttgatac acgactttat cggcgattct taacatcatg
    21001 cggcgtgttg atgtcatcgt gtaacgttca tgaacgactt tatgaatttg tttttggact
    21061 tctgtaaaag gcacaatgtg taaacgaatt gaaccgactc tctccgccat aattcgcgtc
    21121 aattcaatca ctttttcttt cgctttttca cttgtaaatg gcggactatg gaaatgaatc
    21181 gcttcaatcg ttacaccacg gcgcatcact tccatccctg caaccggtga atcaataccg
    21241 cctgataaca ttaacaacgt ctttcctcct gttccgactg gcaaaccacc aatcgctgga
    21301 ataatgcggt catacatata aatcgcatct agacggactt ccactttgat ttcatggtca
    21361 ggttggcgaa catccacatg gagtgatgta ttacttttaa gcacttcacc accgaccata
    21421 cgttggattg caaatgtttc atattcaaaa tttttgtcag agcgtttcac ttcaattttg
    21481 aaactatctc ccgcttcata attttgagca aataatcgtg cgtgttcata caccgcatcc
    21541 atcgactttt ccaactttaa aactgggctg attgaatgta caccgaacac tttcgatata
    21601 cgtgtcatca tttcttcaat gtcagcttct ggttctaatt gaatatacat gcgatcacga
    21661 ttcgctttca cttcataccc tttcaatggc atgagtgcac gttttacatt ggaacgcaac
    21721 tgactgacaa atgttttacg attccctccc tttaatgtta attctccata acgaactaat
    21781 atatggtcat aaatcatttt tctaacaact cctcaacttc tctatatact tggtgaaacg
    21841 ctactttaaa cgtttcaata tcttgcatgg tcgtatgtcg atcaaatgac aaacggatac
    21901 ttcctaaaat acgcgacact gaaatgttca tcgcttttaa tacttcattg acattcgaat
    21961 gtttggacga acatgcactt gtcgtcgaaa tcataatccc ttgcttcgaa aaggcattga
    22021 ctaatacttc tcctcgtaca cctggaaatg ccaaatttaa aatatgcggt gatgcatcaa
    22081 ccggtgaatt aatgacgaca ccaggataat cttgaatcat ctcacgcaat gcagtggtaa
    22141 atgtcgacaa cgtttgtatt aagaacgcac gttgatcttc cgccagtcga atggctttcg
    22201 ctaatgccac atcacttgcg acattgaccg tcccactacg caaaccaaat tcttgaccgc
    22261 caccttgaat aattggataa atttgatgta agttttttaa aatgagtaaa ccttgacctt
    22321 ttaaaccatt aaacttgtga ccactcaacg ataaactgtc aatccctgtc atttgaatcg
    22381 gccatttacc aagtgcttgt accgcatcaa catgaaaatg tactttcgga taaggcttta
    22441 agctttcaac aatctcttca ataggttgca tttgtcccat aatattattc acttgcatgc
    22501 acgtcactaa aatcacatca ttggttaaca gtgactttaa atcatcaatg tcaatgcgcc
    22561 cctcagttgt cacattgacg tactttaata taaaaccttc tcgctcaagt tctcgcataa
    22621 cttctaatac agatggatgt tcaagtaacg acgtgatgat ggtacgtcca aaatgctttt
    22681 tctgatgtgc tgcccctttt aaagccatat tgttcgactc tgttgccccg cttgtaaata
    22741 taagtgtttc atcgtttaac ttcagcgtcg atttaatttg gtctctcgca ttttgtaata
    22801 aacgctcaac ttcttgccct ttttgatgtg ggctattcgg attatagaaa aacttctcgt
    22861 tcactttcat aaaactcgat aacacggatg gatcgggttt cgtcgtcgct gcgttatcaa
    22921 aatataacat gtgcagactt cctctcttta aatttcattt tacattgtac tacaagtctt
    22981 gggtctgatg tcatatccat tcgatatttt ctaaattttt atcattccgg taaacttttc
    23041 gaatcgaatg gcttcactat accattttca aatgaacccc ataaaaaagt gcacctatca
    23101 tagttaatga cactacgata gatgcacgtg ttacttcgct gttgcattca tatattaaga
    23161 ttgttgttct aacacttctc gttcaatatg ttgtgcgata ccaggctcaa gttgttcgag
    23221 cgcttgttct gaaatctcac ttgaacgctt gtagcggttg tttttaaata aacgttctgc
    23281 ctcgttcaag ctcttatcta aatcatgatt gtctttacga taacggttgc cgtattgaat
    23341 gagacgttct gcgtacaccg cattaatgag cacatcgttc gcttcatctt caaatttgtt
    23401 catttgaagc acgactttat taactttatc cttcaattgt tgcacattaa ttggtcgctc
    23461 actaaaacgt ttattgacgt cacgcacttc ataatcaatt tcatttttca aaataatgaa
    23521 acgttctggc acgcttgtta agtttgaagc aagtaaacga cgataaattt cttctttctt
    23581 actttggaca cgtaaaatat gttcttctgc ctctgcttca tcttctctta gtgacacgag
    23641 atgattttgt agcttttctt gtttcgtatt aattacttca acatggtctt caatatattt
    23701 caagttatct tggacttcgc tataacgtac agatgatttc gccatttcag ataaaatttc
    23761 gtcatacact gaaattaaat tttgaatctc attttcaaat tgacgcacac tttgtacatc
    23821 actttcattg atataataat tctcacgcac gtattcaatt tcagtttgta acgtgtaatt
    23881 catatctttg gcatggaaca aatcatttgt aatacgttct ttagattctt ctacagcatt
    23941 tttcgattta acttcatgct cgattaagtc atacatatca tcaaggcggt cattaatttg
    24001 agccaatttg tcattcgctt catctagctc aagacgacta atcatcggtt caacaaagct
    24061 aagctctgtc tttaagtctt gtaatgtact gtcgactttc acatgatcta aatcataacc
    24121 ttctactttc aaatcacgta cgccatattt aatatcttga aattgaccag gcagttcttt
    24181 ttgtgcttca cgcattaaat caggaatttc actcatatct tcttttaaat aagcaatatc
    24241 ttgatctaac ccttgaatat gcgtgtgtgc ttcttggtag ttaccttcag cttttaacgt
    24301 ctcatacact tcaaattctg gttcaaaacc ttcaatttcc ttttctaata aacttgctga
    24361 ttcaccatat tgatgacgat ttgcaaggac atcgcgcttc aatttacggt attcattttt
    24421 acttctttca taaatttcat cgctctgttg atgcatgtcg tatacttcat ccgcttgact
    24481 aatcaactct tgatgtttcg cttcgtactg gtccattaaa gcatgtgcat catcaatgtc
    24541 cgtttgagct aatgaaaact tgaatttatc tagattcatt tctgcttcat ggattttttc
    24601 atctacaggt gccaaatagt tatttgttgt gtccgtccat gattggttca atgtatcgta
    24661 ctgatttttt gtttcaccag ataagtgtaa cgttttcaat ttctccaaac tttcatcata
    24721 cgacaatgca tttaactttt ctcttctctc ttcagcagat tgaataatcg accttttgtt
    24781 tgatcgcatg taaaataaaa caccgattgc aatcaaaata acaatgataa tcgctagtat
    24841 aatatataat gccatgtcca ctcgtctcct cctaaataca taaaactatt ataacgtaat
    24901 ttaaggatgc attaaaataa aatcttaaaa ttaattgcag ttttttgcag ttctatcaaa
    24961 atatctcaga aaattgcgtc gtattcaaga gatagcttat aatatgggat aaattgataa
    25021 gaaagtgagt gaattgaatg acagaaacaa cagactatca tctcttatct cgtcaacttg
    25081 atgcgatgtt agatggagaa acagatttaa tcgcaaattt aagtaatgct tctgcgttat
    25141 taaatgaaaa tttatctcaa attaactggg tcggttttta cttaatgaaa gatgaggcat
    25201 taattttagg accgttccaa ggtaaaccgg catgtgttca tatcgaagtc ggcaaaggtg
    25261 tatgtggtac agctgttgca aaaaatcaaa cgcaacgtgt cgctgatgtg catgccttcc
    25321 ctggccatat tgcctgtgat gcgaacagcc aatctgaaat cgttattcca attcataaag
    25381 gcagcgaagt gattggtgta ttagatatcg atgcccctat ccctgcgcgt ttttctgaag
    25441 cagacgaagc aggtttagaa gacgtcgtaa aagtactaga aacacacctt taaaccattt
    25501 attcaaatta tgtttgactt ttacgtataa aatgatacaa tatcctttgt gtgaataaac
    25561 gaaaatagca gttgaatatt aataggcgct atgatgttcc caaagcggac gtgtcgtgta
    25621 accggagcta tgaggtgagg atacataaaa cattatatcc tattgagcat tcaacactct
    25681 tttttgtttt ttcataacaa caaaaaagaa aaaggaggag tcacattatg gctcgattca
    25741 gaggttcaag ctggaaaaaa tctcgtcgtt taggtatctc attatcaggt actggtaaag
    25801 aattagacaa acgtccttac gcaccaggac aacacggtcc aactcaacgt aaaaaattat
    25861 ctgagtatgg attacaatta cgtgaaaaac aaaaattacg ttacttatat ggtatgactg
    25921 aacgtcaatt ccgtaacaca ttccaaactg ctggtaaaca aggcggtgtt catggtgaaa
    25981 acttcatgat cttacttgct agccgtttag acgctattgt ttacgcttta ggtttagcgc
    26041 gtacacgtcg tcaagcacgt caattagttg gtcacggtca cgtagaagtt gacggtaaac
    26101 gtgttgacat tccatcatac acattaaaac caggtcaagt tgttactgtt cgtgaaaaat
    26161 cacgtaaatt agcaatcatc gaagaatcag ttgaaatcaa caatttcgtt cctgattact
    26221 tagacttcga tgctgataac ttaacaggta ctttcgttcg tcttccagaa cgtagcgagt
    26281 tgccagctga aatcaatgaa caattaatcg ttgagtacta ctcacgttaa tctgttattt
    26341 ttcggacacc aagtatatac atatgcttgg tgtttttttg cgtttaaaaa tgtatcataa
    26401 gatggctaac aaaacgccct tccatataaa ttgcatcatc agtaatcaat gcaggcgtca
    26461 catacgactt cgcatctgtc acagttttta caatacctgt gtgtttatcc tttaatttcg
    26521 tttcacccag tgccactttc gtttgtgtag cttctgtagg tgaggacgta ccgccaccac
    26581 tagccgtgtc atcagcaaaa aattgtaaat tgaatttcaa attaaatttc atcatcaaat
    26641 caacctttct taatttaaaa atgttttcca agcttcatct gttttaggcg cttcaacatg
    26701 attcccaaca acgtggtttt gtgtcgcttt actttctaat tgacgctgca cttcctgatt
    26761 caccatcgaa acaaagctat ctacagcttc ttttgttgct tctgctgtat cctgaacaac
    26821 cattttcaat aaagattcag gggcttgcat acctgcctca ttaaacatcg ccattgcctc
    26881 ttgacgcatc ttgtatgact caagttgttg tttatagtca tcacgttctt tttcagcctt
    26941 ttcaagctcg tattgatgtt tttgttcggc attcatctta cgtaatttat cagcttcttt
    27001 ttgcttctca gtcaattcat cttgaatttg ttgacgcatc tctttcgtac gacgatgcaa
    27061 ctctttattc acacgatcat tcactaactt catttgagac tcagacagtt cttcaacttc
    27121 ttgtgtcggt tcagtttcaa cattctcatc actcacggct tcctcagtac ctgcatcact
    27181 aaaaaattgt aagcttaact ttaaccattg ttctttcata tttcgcacct catttaaatc
    27241 tactcttgca agttttatgt cattgcatgg tttggactac acttgcatct tttaacgcca
    27301 taagcacggt ttgggcaata aaaaaagcca ctgcaataca gtagcttaaa attgggtata
    27361 aaaagagcac cgagatgaat gatttaccac ttcatccggt gcttaatcta aaacttcaat
    27421 cgatttaatt tcgctttctc taaattcata cagtaattcc ataccaacat ctaaatatat
    27481 gcaatcttct ccgttgtcat tagctacttc atcatcatag ccggacacac gtccattgaa
    27541 ttccttacca ttttttaata ttacacgtac gtttttatct acataagtcc atagtttcat
    27601 tgctaatcct cctttttagg aatgacgtgg gttccagttt ttgaataatg cactatcccc
    27661 cattttgtag ttataaactt gccattgatg ttgactttac caatatcttt accgaaatca
    27721 atgacttctt tgtttctcca ctcacctgta tcactggcaa ttaaacgtcc actaccagtc
    27781 ttttgttgta tgaaggaatt taattcgttg ttgtctaatt cggtatagct cggtatcggc
    27841 aacccttttt gtaaattctt tttcttataa tcttcataca atttatgacc tagctgatgc
    27901 ctattctgtt tgttagggtt taattcaact tttattttga taaagtccgt ataattgtgt
    27961 aaaagtaaaa aggccatata acagtccttt tacggtacaa tgtttttaac gacaaaaaca
    28021 tacccaggag gacttttaca tgacccaagt acattttaca ctgaaaagcg aagagattca
    28081 aagcattatt gaatattctg taaaggatga cgtttctaaa aatattttaa caacggtatt
    28141 taatcaacta atggaaaatc aacgaacaga atatattcaa gcaaaagaat atgaacgaac
    28201 agaaaaccga caaagtcaac gaaatggcta ttatgagcgc agctttacga cacgtgtagg
    28261 cacgctagaa ttaaaagtac ccagaacacg tgatggccat ttttcaccca cagtgtttga
    28321 acgttatcaa cgaaacgaaa aagccctcat ggcttcaatg ttggaaatgt atgtatcagg
    28381 cgtttcaact cgtaaagtat caaaaattgt ggaagaactt tgtggtaaat ccgtctctaa
    28441 gtccttcgtt tctagcttaa cagaacagct agaacctatg gttaacgagt ggcagaatcg
    28501 tttattatca gaaaaaaatt atccttactt aatgaccgat gtactctata taaaagtacg
    28561 agaagaaaat cgagtactct caaaaagctg tcatatagcg attggaataa ccaaagatgg
    28621 cgaccgtgaa attatcggct tcatgattca aagtggcgaa agcgaagaga cctggacaac
    28681 attttttgaa tacctaaaag aacgcggttt acaaggtacg gaactcgtta tttctgatgc
    28741 gcacaaagga ttagtctctg ccattagaaa atccttcacc aacgtaagtt ggcaaagatg
    28801 ccaagttcac ttcctaagaa atatctttac caccattcct aaaaaaaatt caaaatcttt
    28861 cagagaagct gttaaaggaa tttttaagtt cacagatatt aacttagcgc gtgaggctaa
    28921 aaatcgattg attcatgatt atatcgatca accaaaatat tcaaaagctt gcgcatcatt
    28981 ggatgatgga ttcgaagacg cctttcaata taccgtacaa ggaaattccc acaatcgact
    29041 aaagagtacc aatctaattg aacgactgaa tcaagaagta cgcagaagag aaaagattat
    29101 tcgcatcttc cccaatcaaa catcagccaa tcgcttaatt ggagccgttc ttatggacct
    29161 acatgatgaa tggatttatt cttcaagaaa atacatcaat tttgataagt agaaatggta
    29221 aaaacattgt atagcatttt acacaggagt ctggacttga ctcacttcct tta
//
LOCUS       DANHPA010000016        29110 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.016, whole genome shotgun sequence.
ACCESSION   DANHPA010000016 DANHPA010000000
VERSION     DANHPA010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 29110)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29110)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29110
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.016"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            22..3753
                     /locus_tag="PTC28_000594"
     CDS             22..3753
                     /locus_tag="PTC28_000594"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012948.1,HMM:NF021909.1,HMM:NF028519.1,
                     HMM:NF037690.1,HMM:TIGR01168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HDK5715912.1"
                     /translation="MITNKNIYSIRKHKLGVASFLLGTLFVVGHANNAEASEVSATTQ
                     EHNVETEQTKTEGELTTEVAQQAVSESAPIAENMQKTTSVASENAKEVTASDSTQEVT
                     KTEAKDTATMKDSEIAQPVSEVNKPVTQTAPVQAPTTATEHKSPRQAQELTAPMDTKV
                     INVENGTDVTSKVKVETSSITGHQNNDKTYRQSNTVNPHKAERVTLNYDWSFENGIKA
                     GDYFDFQLSDNVDTNGISTIKKVPHIMDSQNSEQIIAYGEINENNRVRYRFMDYVNQK
                     ENLKGKLSLNLFIKPDKVQDEGKITVTSQLGKEMTSQEFDIKYIDGVKSPSGITLNGR
                     LDELSKADQSFTHYAIFKPKHNNLTNVTLRGTVSNNAQQNEKNGQVNVYEYIGQGELP
                     QSAYANVKDTNQFRDITNSLRPTTVNSTGYQITFDHINKKPYVIVYKGHYKNEAKDLE
                     FTTNATDYHSSNLYSYNYWPYYGSFNLTWKNGVAFYSNNASGEGNDKPVPPTYGFSEL
                     VDTTQNTAPATMTFQTTGVLEEIEDSVVLNTLSQSGEDRGENTSPIIETTEDSQPVEF
                     EEETNHGIQDVTLHADAVDFEEETNHGEQDTVHHSDVVEYDEDTTTGMLTGAISDHTT
                     EEDTMEYTTDGLLIEFDDEMNPNVSGQYDDITTDTIEESSHIDTFTELESEFGQHDGI
                     VTFEEDTIVEKPKTEKGNRVPLVIDLSTPKHNHQFNIQPTDPNIDTSATYRIGDFVWR
                     DEDHNGVQNDGEHGLEGVLVTLKTADGVVLNTTTSDANGHYQFTNVQKGKYIVEFTTP
                     EGYEATSKHTTANTEKDSDGLIANIDVTQDDMSIDAGFFPLENWNPQPKDETYTIGDF
                     VWRDEDHNGVQNDGEHGLEGVLVTLKTADGVVLNTTTSDANGHYQFTNVQKGKYIVEF
                     TTPEGYEATSKHTTANTEKDSDGLIANIDVTQDDMSIDAGFFPLENWNPQPKDETYTI
                     GDFVWRDEDHNGVQNDGEHGLEGVLVTLKTADGVVLNTTTSDANGHYQFTNVQKGKYI
                     VEFTTPEGYEPTSKHTTANTEKDSDGLIANIDVTQDDMSIDAGFFPLENWNPQPEPKN
                     PDDKEKPAPEQPDVPQPEPKNPDDREKPAPEQPDVPQPEPKNPDDREKPAPEQPDVPQ
                     PESKNPDDKEKPAPEQPDVPQPKPMLPGEKVKPKPTHPGEAMQTTPQDKSTSQTDEVL
                     PKTGESSSQSSALIFGGLLSLLGLGLLRRSSKQNRSSMK"
     gene            complement(3814..5613)
                     /gene="pepF"
                     /locus_tag="PTC28_000595"
     CDS             complement(3814..5613)
                     /gene="pepF"
                     /locus_tag="PTC28_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoendopeptidase F"
                     /protein_id="HDK5715913.1"
                     /translation="MSQKLPHRSEVARVETWDLTDLYPNPESYEQALKSLPQEAQAFK
                     VQYENQLNTVENLEKGLNTYAQLLVELERAGNYAELLHSVDTSDAERQRLNALFSTQY
                     GKVLSQLTFVESELLNLDDAVMQQAISELDYSYYLTQLQKKKPHQLHPKAEEALASMS
                     TALDVPYDIYGVTKMLDIDFGTFEVNGLTYDMDYTTFEGYYEDHDDTALRRASFRHFS
                     DTLKKYEHTTAAVYNAQVQREKLEADLRGYDSVIEYLLEEQDVTLDMYHRQIDLIMSD
                     LAPIMRKYAKLVQQANGLDELKFEDLKISIDPTFEPEITIEESKKYIFGALDVLGSEY
                     VEMLHQAYDARWIDFPQNKGKETGAYCASPYASHSYIFISWTGKMTEAFVLAHELGHA
                     GHFTFAQKHQNYLQSEASMYFVEAPSTMNEMLMLNYLFKNSNDARFKRWAIASIISRT
                     YYHNMVTHLLEAAYQREVYQRVDQGESLSAPTLNAIKRQVIEQFWGDTVTITDGAELT
                     WMRQPHYYMGLYSYTYSAGLTIGTIMAQRIKNEGETAVQDWLNTLSAGGSMSPVELAQ
                     LAGIDVTTDQPLKDTIAYIGELVDELESLTTEI"
     gene            5745..6068
                     /locus_tag="PTC28_000596"
     CDS             5745..6068
                     /locus_tag="PTC28_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715914.1"
                     /translation="MAILDMPNYIWITLLIMVVLTLFCTLVLNKWFFTAIIMFIVLGA
                     LAFILPNFKPIRYEPLLGYAAFVAILSLILSFILWFITRDWRKKRQMKKYEKERARFE
                     QQHRS"
     gene            complement(6658..7917)
                     /locus_tag="PTC28_000597"
     CDS             complement(6658..7917)
                     /locus_tag="PTC28_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyltransferase"
                     /protein_id="HDK5715915.1"
                     /translation="MKFTELTVEEYDQFVQNPALESHYFQVKENIATREADDFQVVLL
                     GVKDDNNQVLAASLFSKIPTAGSYVYYSNRGPVMDYSDLGLADFYLKELDQYLNRNKC
                     LYVKMDPYWIYQVYDKDIHPMGDKMPNDKLVQLFKSHGYRHHGFTTSYDTSSQVRWMG
                     VLDLKGHTPQTLKKQFDSQRKRNINKATNFGVKVRFLEVDEFDQFLELYRETEERAGF
                     VSKTDEYFKNFINTYGHKALVPLAYIDLDEYITSLQESLNDKETRRDQMMANENKSDK
                     QIKKIAELDKQIDHDQQEMLKASELRKTDGSVLNLAAGVYFANAYEINYFSGGSSEKY
                     NHFMGPYAMHWFMINYCFDHGYERYNFYGVSGDFTENSEDYGVYRFKRGFGVQIEELV
                     GDFYKPIHKVKYFVFDVLNRLRSKIKR"
     gene            complement(7947..9212)
                     /locus_tag="PTC28_000598"
     CDS             complement(7947..9212)
                     /locus_tag="PTC28_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyltransferase"
                     /protein_id="HDK5715916.1"
                     /translation="MKFTNLTTAEFGAFTDSMPYSHFTQMVGNYELKVAEGVETHLVG
                     IKDNQNQVLAACLLTAVPVMKVFKYFYTNRGPVMDYENQELVHFFFNELAKYVKKYNA
                     LYVRVDPYLPMLKRNHDGEVIERFQNDWFFDKMTQLGFEHEGFTTGFDTVRQIRFHSV
                     LDVEGKTAKDILNNMDSLRKRNTKKVQKNGVKVRFLDENELHIFRSFMEETSETKDFV
                     DREDDFYYHRLKHYKDRVLVPLAYIDFTTYIPELKSEEQDFHKQIAKTEKELEKRPDN
                     QKSLNKKNNLMQQLEANQAKIQEAEQLQAKHGDTLPISAGFFIINPFEVVYYAGGTAN
                     EFRHFAGSYAIQWEMINYAIEHHIPRYNFYGISGHFTEDAEDAGVVKFKKGYNADVIE
                     YVGDFIKPVRKPVYKIYTTLKQLKEKIKR"
     gene            complement(9387..10421)
                     /locus_tag="PTC28_000599"
     CDS             complement(9387..10421)
                     /locus_tag="PTC28_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HDK5715917.1"
                     /translation="MNESVIETLTALTAINSPSGNADRAIAYVQQTVEAYGYNTQLTR
                     KGGLLIEVKGDDDTEKKCITAHVDTLGAMVKEILDNGRLRLALIGGFRYNAIEGEYCT
                     IETTTGQTYRGTILLHETSPHVYANNHEIPRNQEHIEVRIDEKVTSADETRELGIDVG
                     DFVSFDPRTEVTASGFIKSRHLDDKVSVAIIIEFLKQYRHREDRLPHTIQFYISNNEE
                     IGYGANSNIDPKVVEFIAFDMGALGDGQASDEYTVSICAQDASGPYHKQLRHHLVSLC
                     QKHNIPYKVDLYPFYASDASAALKAGADVKHGLFGAGIESSHAMERTHLDSIKAAQAL
                     LEAYCFSKLL"
     gene            10564..11655
                     /locus_tag="PTC28_000600"
     CDS             10564..11655
                     /locus_tag="PTC28_000600"
                     /EC_number="1.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HDK5715918.1"
                     /translation="MTHVFFVGLGLIGGSLASNIQYFHPDITISAYDAHYEQLERAVS
                     IGIIDQASADYESTLQEADIVIFATPVQTTVQYLSQLPQMKTKPGLIVTDTGSTKSTI
                     QAFEKELLSADIHLIGGHPMAGSHKSGVLNAKKHLFENAYYILVHQLTENQEAAQRIE
                     HLLAPTRARFIHLTADEHDQITGVVSHVPHLIASSLVHLNAFYAADVPLIQDLAAGGF
                     RDITRVASSNPEMWRDISIENKAHIVSSLKQLQQQLTETVDMLEQGHEEALYQFFDQA
                     KTYRDGLPIRGKGAMQSTYDLYVDIPDKPGMISKVTEILSQHQISIRNLRILEVREDI
                     YGALRISFKKAEDRDAAMTALSDFDTYLS"
     gene            complement(11735..12997)
                     /locus_tag="PTC28_000601"
     CDS             complement(11735..12997)
                     /locus_tag="PTC28_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017636417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Y-family DNA polymerase"
                     /protein_id="HDK5715919.1"
                     /translation="MYDYHLLEDRDILCIDQKSFFASVSCIEKGLDPLTTKLAVVADT
                     KRQGSVVLAATPSLKAMGIQTGSRLFEIPHHNDIYIINPSMRRYLEVSLKISEIALRY
                     VPPEDLHQYSIDEFFMDVTKSYYHFNTTLHTFCERLIKEIYDETKVHCAIGIGSNMLL
                     SKLALDHEAKKHPDDIAEWRYQDVPDKVWEITPLSSFWGIGKKTEKKLNQRGIFKIGQ
                     LAHYPYEYLKRDFGILGVDWHLHAHGIDQSRMNEAYQIINPSICKSQILLRDYTYREA
                     HVVMQELIEDVAQRLRARQQIARTIHFSMGYKEGGHVTKQYTLHTGTNLDQDIYKEVK
                     RLADMHCDQGALYRTLSVSLTQLMNENERNLDLFTDEFQRLRQEKLAKTIDALQTKYG
                     KGVVSKAISLTEAGTKYGRLGLMAGHQM"
     gene            complement(13149..13556)
                     /locus_tag="PTC28_000602"
     CDS             complement(13149..13556)
                     /locus_tag="PTC28_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sporulation protein"
                     /protein_id="HDK5715920.1"
                     /translation="MGFDNVLTSLGINGMKVFIRLEQQTFDVSDAIAGTIHLKAGQSD
                     QKVNHIVLTMIEKYENDDETSDFTTISHELNRFEIDEAFIIDVGEEKEIPFHFHPDTL
                     NFKSDKSQVYLNTHVYIDYGVDEETEAVIPYHR"
     gene            13668..13853
                     /locus_tag="PTC28_000603"
     CDS             13668..13853
                     /locus_tag="PTC28_000603"
                     /EC_number="5.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase"
                     /protein_id="HDK5715921.1"
                     /translation="MPIVTVQLLEGRSDEQLKNLVKEVTNAVESTTHADRSAISVVIQ
                     EMKKEHYGVAGVRKSDQ"
     gene            complement(13909..14880)
                     /locus_tag="PTC28_000604"
     CDS             complement(13909..14880)
                     /locus_tag="PTC28_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HDK5715922.1"
                     /translation="MKENNLNRSTSNSSEKTLKRRKKRKIRKLPFVILALILIILVSV
                     VYAVSSYKNGLEVAKDKHQAPKIHKFNGASKNDGKATVLILGADREDGGVSRTDSIMV
                     AQYDYIKKDMKIVSVMRDIYADIPGYNSYKINAAYSLGGPELLRQTLKSNLGIDPEYY
                     ATLDFKGFEAMIDELAPKGIPINVEKDMSEKIGVSLKKGNHRLNGKELLGYARFRNDP
                     EGDFGRVRRQQQVMTALKQQLVQPSSIFKAPKLAGIMRGYVSTDMPDSTIYQTGFSFI
                     VRGDKDIKTLSVPVKGSYENITTNDGGSALGIDKAENKKRIKAFLED"
     gene            15019..15537
                     /gene="msrA"
                     /locus_tag="PTC28_000605"
     CDS             15019..15537
                     /gene="msrA"
                     /locus_tag="PTC28_000605"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDK5715923.1"
                     /translation="MNINTAYFAGGCFWCMTQPFDQNEGIEKVKSGYMGGHVDHPTYE
                     QVKSGDTGHYETVKIEYDVALFSYQKLLEIFFSVIDPTDDGGQFQDRGSQYRTAIFYT
                     NEDQRQVAEAYIASLEGTFNHDKAIATKVLPASEFYEAEAYHQDFYKKQPERFAQQEA
                     EREAYAKEHGIQ"
     gene            complement(15784..18303)
                     /gene="mprF"
                     /locus_tag="PTC28_000606"
     CDS             complement(15784..18303)
                     /gene="mprF"
                     /locus_tag="PTC28_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional lysylphosphatidylglycerol
                     flippase/synthetase MprF"
                     /protein_id="HDK5715924.1"
                     /translation="MTKQLWLKYFKIAFILFLIVTISIILGRELAHIDFKRVFLLFNE
                     ISRMETFSLFLLGGSSVILLSLYDVILTTRFKLSLSKFKALRVGYIINAFNNIIGFGG
                     FIGASVRLWFYGSYTTERKKLVKFVSYMLTSMLTGLSFLSILIVTHVLDVSFLDRTSV
                     WFTVFLYIVAFLLPVFIIISWVSPVDRSARWLGSVFTFVSSMEWLLASIVLYCSFMLV
                     GVNVSFPIVLSIFIVAAISGLLSFIPGGFGAFDLIVLLGLQQLGVAEEKVVLGLLLYR
                     FAYYFFPLLIALVLTVFEFGTAARKYMLESKYFLPAKELSGFLKSFQKDLVGLVPSLA
                     LSTLVFMMSLILLLNNFSIIFDAANKKPHLLFTLLYIFNVSASLILLLNLRGIVARSK
                     RAILFAIVAMIILLLSNLYVYGLSLLVVIIVLILAALIFAYRKSRVLKRPVRMKGILA
                     MVVISVILLYFNQIIVRDFLFALDVLPPKVDFFLLRSTFWLSIIGMTILVVVLIYIFE
                     WNYRRPRELHDRQIASAILKQYGGHLLSHLLYSEDKLVFVNEQKTAFIMYRHDRSSFI
                     VLGDPVGNSSDFYSLLTEFYEYATYLGGDVIFYQVSNNYLTLYHDFGNQFFKLGEEAL
                     IPVSDFTVAGKKRRGFRATLNKLESLGYQFEILDTPLDEATYERLHDISRNWLGKQQE
                     FYFSVGRFTPSYVNAAPVAVLKNEEGRIDAFCTLMPVEGSTTVSVDLIRWDKSLGLPF
                     MDALYLHMILWAQAEGYERFNMGMATLSNVGQVPYGHLREKFAGRFYEHFNGLYSFQG
                     LRQYKSKFNPDWESRFLIYHRGQNAWESLLKVTRVIRKKKI"
     gene            complement(18399..19601)
                     /locus_tag="PTC28_000607"
     CDS             complement(18399..19601)
                     /locus_tag="PTC28_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDK5715925.1"
                     /translation="MSENQHKQNGVSKNIDIRESRFMKFFGGKDLIFALLVFILVGIV
                     IFIFDRVSYIFQPFIIIFNTIAAPIIIALILYYLFNPVINLMERYNINRIWGITILFL
                     GIIGMITIAVNLLIPIVSFQFDRLMDNFPNYLNKLTSFANNMMHIPFLSDYYSQIEKA
                     VTGLQEKIPTFADGLSSKIRVFAEAVVNITVVIITVPFVLFFMLKDGHRFKEFSNKIV
                     PPKFRKDVHDLLDKMSEQVGSYIQGQIIVSFCIGILLFIGYSIIGLDYALILASIAAV
                     TSVVPYLGPTIAISPAIIISIITSPFMLIKLIVVWTAVQFIEGHFISPNIMGKTLKIH
                     PLTIIFVLLSAGNLLGVVGVILGIPSYAILKVLVSHIFLLFKRRYNKYYADDAGPYEM
                     PKEEYSKD"
     gene            complement(19874..21913)
                     /locus_tag="PTC28_000608"
     CDS             complement(19874..21913)
                     /locus_tag="PTC28_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit IIABC"
                     /protein_id="HDK5715926.1"
                     /translation="MRKKLFGQLQRIGKALMLPVAILPAAGLLLAFGAALQGEQLQSY
                     LPFIQADGVQNVAEMMAAAGSIIFENLPIIFAMGVAIGLAGGDGVAAIAAFVGFIILN
                     KTMGEFLGVTPDNVGDAAKGYASVLGIPTLQTGVFGGIIIGALAAWCYNKFYNISLPS
                     YLGFFAGKRFVPIVMATTSFLLAFPMALVWPVIQNGLNAFSEGLLDSNTGLAVFLFGF
                     IKRLLIPFGLHHIFHAPFWFEFGSYTNMAGEIIRGDQRIFIEQIREGTNLTAGKFMQG
                     EFPVMMFGLPAAALAIYHTAKPENKKVVAGLMGSAALTSFLTGITEPLEFSFLFVAPL
                     LFFIHAILDGLSFLILYLLDLHLGYTFSGGFIDFVLLGILPNKTHWWLVIPVGLVYGV
                     IYYSIFRFLITKMNYKTPGREDKQTETTTTTASELPYAVLQAMGDKDNIKHLDACITR
                     LRVEVNDKSKVDVARLKDLGASGVLEVGNNMQAIFGPKSDQIKHEMQQIMSGQAVQHP
                     VDLDEDKDEAVVIDEAADTTAVTKTGQVVAPMDGEVVPLSEVPDQVFSEKMMGEGIAI
                     RPTSGEVYAPFDGKIQMIFPTKHAFGLVSDNGLELLIHVGLDTVKLNGEGFTVHVEEG
                     QTIKAGDHLMTVDLELIRASAKSDITPIIVTQSEVTALKFTEAKDVKHGDKLFEI"
     gene            complement(22024..22875)
                     /locus_tag="PTC28_000609"
     CDS             complement(22024..22875)
                     /locus_tag="PTC28_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator"
                     /protein_id="HDK5715927.1"
                     /translation="MNQYTIKKVLNNNVLICEYQQSEVVIIGKGLGFNKKPGMKINDL
                     DTIEKVFKLENKNEQDHYKMLVAHTDERVLRAVIDSVQIIMTHFELHHEESFIVSLTD
                     HLIFALKRLEKGQLIKNPFLSETKYSYPEAYKIAKKVVARINLQLNTDFPEDEVGFIA
                     LHIASQTDDIDLSEMQYVPKLINNAIRMIENDMKIQIPVASIQYQRFVRHIHFLLQRL
                     KKGERTTIELSFENLLKAQYPLCYNVAVKIVKMIQSQIDVRVDEAEVAYLTMHIQQLS
                     LASQNQS"
     gene            complement(23071..24534)
                     /locus_tag="PTC28_000610"
     CDS             complement(23071..24534)
                     /locus_tag="PTC28_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HDK5715928.1"
                     /translation="MRDFDSLIPDWFKAFIQIGNDLIWSQYLIGLLLTVGLFFSISSK
                     FVQIRWLPEMFRALTDKSETLESGKKGISSFQAFAISAGSRVGTGNIAGVATAIVLGG
                     PGAVFWMWIIAIIGAASAFIEATLAQVYKVPDKEGGFRGGPAYYITKGLNQRWLGVLF
                     AILITVTFAFVFNTVQSNTIAESLNTQYHISPLVTGIILAVITAIVIFGGVRSIATLS
                     SVIVPVMAIIYILIVLVILVMNIDQIFPMISTIIKSAFGIDQATGGAVGFAVLQGVKR
                     GLFSNEAGMGSAPNAAATAAVSHPVKQGLIQSLGVFFDTILVCTATAIMILLYSGLKF
                     GEGEAQGVAVTQSALNEHLGSAGGVFLSIAVALFAFSSVIGNYYYGQSNIEFLSTNKV
                     VLFIFRCFVVILVFVGAVVKTETVWNTADVFMGLMAIVNIIAIIGLSNIAFAVMRDYQ
                     RQRKEGKRPIFRPENLEINLFGIESWGNAIHKNKKED"
     gene            complement(24637..27048)
                     /gene="parC"
                     /locus_tag="PTC28_000611"
     CDS             complement(24637..27048)
                     /gene="parC"
                     /locus_tag="PTC28_000611"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HDK5715929.1"
                     /translation="MAEIIQNLPLVDVIGDRFGRYSKYIIQERALPDVRDGLKPVQRR
                     ILYSMYSNGNTYDKHFRKSAKTVGDVIGQLHPHGDISVYDAMVRLSQDWKLRHVLVEM
                     HGNNGSIDNDPPAAMRYTEAKLSQLSEQILRDINKDTVDFVPNYDDTEMEPMVLPARF
                     PNLLVNGSTGISAGYATDIPPHNLAEVITATLKYIDNPDLTVKQLMKYIKGPDFPTGG
                     IVQGIDGIKKAYETGKGKVVVRAKADIETLRNGRSQIIVTEIPYEVNKSSLVKKIDEL
                     RADKKVEGIVEVRDETDRSGLRVAVELKKDVNATSILNFLYKNTDLQVAYNFNMVAIT
                     EGRPKLMGIKPIISSYLNHQIEVVTRRTSFDLKHTEERMHIVEGLMKALSILDEVIAL
                     IRNSKNKRDAKENLVKTYDFTEAQAEAIVMLQLYRLTNTDIVALQEEYDALKQKIAAL
                     KHILENHDALLDVIKEELSEIKKQFKQPRLSVIEEKISEIKIDKEVIVPSETVMLSLT
                     QEGYIKRTSLRSFNASGKEEIGLKERDGVLKIIETNTQDYAMVFTNKGRYLLIPVHKL
                     PDVKWKDLGQHVSQIVPIEEDERVVDCYTVSEFNDERAIITATRQGMIKKSLLSGFKS
                     TRTTKPLVAMKVKESDALISVMLVPADASSQLITLLTHRGMSLTYPMSELPDTGLRAT
                     GIKAINLKDEDHVVLADHIQTEDTILIATQRGALKRIGFKVLQQAKRAQRGITLLKEL
                     KKQPHRVVAARVCRPEQSQYRLVSQQDETTGLIKDIHLSEQYTNGSFVVDTSTFGEIE
                     DLYVD"
     gene            complement(27048..29045)
                     /gene="parE"
                     /locus_tag="PTC28_000612"
     CDS             complement(27048..29045)
                     /gene="parE"
                     /locus_tag="PTC28_000612"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HDK5715930.1"
                     /translation="MSAKKVNNYSDDAIQVLEGLEAVRKRPGMYIGSTDKRGLHHLVY
                     EVVDNSVDEILNGYGNEINVTINEDESITVADNGRGMPTGTHRSGKPTVEVIFTVLHA
                     GGKFGQGGYKTSGGLHGVGASVVNALSESLSVEIHRDGEIFEQQFAHGGVPQTKLIKK
                     GKTKKTGTTVTFKPDAEIFKSATSFNFETLSERLQESAFLLQNLKITLEDRRVGKERS
                     EVYHYEEGIKAFVSYVNEGKEVLHDVALFQGTANEIEVDVSFQYNDQYSESIMSFVNN
                     VRTKDGGTHEVGFKTAMTRVFNEYARRIGDLKAKDKNLEGNDIREGLTAIISVRIPEH
                     LLQFEGQTKSKLGTPEARSAVDAIVAEKLPFYLEEKGQLSKSLVKKAIKAQQAREAAR
                     KAREDARSGKKNKRKDTLLSGKLTPAQSKNTEKNELYLVEGDSAGGSAKLGRDRKFQA
                     ILPLRGKVINTEKARLEDIFKNEEINTIIHTIGAGVGNDFNLKDSNYNRIIIMTDADT
                     DGAHIQVLLLTFFFKYMRPLVMAGRVYIALPPLYKLEKGKGKNKKIAYAWTDEELEKL
                     QREMGKGFVLQRYKGLGEMNPDQLWETTMNPETRTLIRVQIDDEVRSSQRVSTLMGDK
                     VAPRREWIERHVQFGMQEDLSILENEEIQILSDDDIAEEDA"
BASE COUNT         9252 a         6102 c         4897 g         8859 t
ORIGIN      
        1 aagagaagaa gagggaaaaa agtgattaca aataaaaata tatatagtat tcgaaagcat
       61 aaacttggcg tggcatcatt cttattggga acattatttg ttgtagggca tgcaaataat
      121 gctgaagctt cagaagtgag cgcaacaaca caagaacata atgtcgagac tgagcaaaca
      181 aaaactgagg gcgaactaac aactgaggta gcacaacaag cagtcagcga atcagcacct
      241 atagctgaaa acatgcagaa aacaacatca gtggcaagtg aaaatgcgaa agaggttaca
      301 gcttctgata gcacacaaga agtcacaaaa actgaagcaa aagatacagc aacaatgaaa
      361 gattcagaaa ttgcacaacc tgtatcagaa gtgaataaac ctgttactca aacagcaccc
      421 gttcaagcac caacaacagc aacagaacat aagtcaccac gacaagcaca agaacttact
      481 gcaccaatgg acacaaaagt aattaatgta gaaaacggaa cagatgtgac aagtaaagta
      541 aaagttgaaa catcatcaat tacaggccat cagaataacg ataaaacata ccgtcaatcg
      601 aacactgtaa atccacataa agctgaacgt gtgacattaa attatgattg gtcatttgaa
      661 aatggaatta aagctggtga ttattttgac ttccaattaa gcgataatgt cgatacaaat
      721 ggaatatcaa caataaaaaa agtcccacac attatggata gtcaaaatag cgaacaaatt
      781 attgcttacg gggaaattaa tgaaaacaac cgtgtccgtt accgatttat ggactatgta
      841 aatcaaaaag aaaatttaaa aggtaaattg tcattaaact tatttattaa accagataaa
      901 gttcaagatg aaggaaaaat cactgtcact tcacaattgg gcaaggaaat gacaagtcag
      961 gaatttgaca ttaaatatat tgatggtgta aaaagccctt caggtatcac attaaacggt
     1021 cgtcttgatg aattatcaaa agcagatcaa tcatttacgc attatgctat atttaaacct
     1081 aagcataata acttaactaa tgtaacttta agaggcacag tttcaaataa cgcacagcaa
     1141 aatgaaaaaa atggtcaagt taatgtttac gaatatattg gtcaaggaga attgccacaa
     1201 agtgcttatg ccaatgtaaa agatacaaat cagtttagag atatcactaa tagtttgaga
     1261 ccaactactg ttaatagcac tggttatcaa atcactttcg atcatataaa caaaaaacct
     1321 tacgttattg tctacaaagg gcattataag aacgaagcta aagatttaga attcacaact
     1381 aatgcaacag attatcatag ttcaaatcta tattcatata attattggcc atactacggt
     1441 tcattcaatc taacatggaa aaatggtgtt gctttctact ctaataacgc aagtggggaa
     1501 gggaacgaca aacctgtacc gccgacttat ggatttagtg aattagtgga cacaactcaa
     1561 aatacggcac ctgctacgat gactttccaa acaactggtg ttttagaaga gattgaagat
     1621 agtgttgtat taaatacact ttcacaatct ggtgaggatc gtggtgaaaa tacttctcca
     1681 attatcgaga caacagaaga ttcacagcct gttgagtttg aagaagagac aaatcatggc
     1741 attcaagacg tgacacttca tgcagatgct gttgattttg aggaagaaac aaaccatggt
     1801 gaacaagaca cggtacacca ctctgatgtc gttgaatacg acgaagatac gacaactggc
     1861 atgttaacag gtgccatttc tgaccataca acagaagaag acacgatgga gtacacaact
     1921 gatggcttat tgattgagtt tgatgatgaa atgaatccta atgtgagcgg tcagtacgat
     1981 gacatcacaa cggatacgat agaggaatca tctcatattg acacattcac tgaacttgaa
     2041 tctgaatttg gtcaacatga cggtatagtg acatttgaag aagatactat cgttgagaag
     2101 ccgaaaacag aaaagggtaa ccgagtacca cttgtaattg atttatcaac accaaaacat
     2161 aaccatcagt tcaatattca acctaccgat ccaaatattg atacctctgc tacgtatcga
     2221 attggcgatt ttgtatggcg cgacgaagat cacaatggcg tacaaaacga tggcgaacac
     2281 ggtctcgaag gcgttcttgt cacacttaaa acagctgatg gtgtcgtttt aaatacaacg
     2341 acaagtgatg ccaatggaca ctaccagttc actaatgttc aaaaaggaaa atatattgtt
     2401 gaattcacta cacctgaagg ttatgaagca acaagcaaac atactacagc gaatactgaa
     2461 aaagactctg atgggttaat cgcaaatatt gatgttactc aagatgatat gtcaatcgat
     2521 gctggtttct tcccgttaga aaactggaat cctcaaccca aagatgaaac atatactatt
     2581 ggcgattttg tttggcgcga tgaagatcac aatggcgtac aaaacgatgg cgaacacggt
     2641 ctcgaaggcg ttcttgtcac acttaaaaca gctgatggtg tcgttttaaa tacaacgaca
     2701 agtgatgcca atggacacta ccagttcact aacgttcaaa aaggaaaata tattgttgag
     2761 ttcactacac ctgaaggcta tgaagcaaca agcaaacata ctacagcgaa tactgaaaaa
     2821 gattctgatg ggttaatcgc aaatatcgat gtcactcaag atgatatgtc aatcgatgct
     2881 ggtttcttcc cgttagaaaa ctggaatcct caacccaaag atgaaacata tactattggc
     2941 gattttgttt ggcgcgatga agatcacaat ggcgtacaaa acgatggcga acatggtctt
     3001 gaaggtgttc ttgtcacact taaaacagct gatggtgtcg ttttaaatac aacgacaagt
     3061 gatgccaatg gacactacca gttcactaat gttcaaaaag gaaaatatat tgttgaattc
     3121 actacacctg aaggctatga accaacaagc aaacatacta cagcgaatac tgaaaaagac
     3181 tctgatgggt taatcgcaaa tatcgatgtt actcaagatg atatgtcaat cgatgctggt
     3241 ttcttcccgt tagaaaactg gaatcctcag ccagagccga aaaaccctga tgataaagag
     3301 aaaccggcac ctgagcaacc tgatgtacct caaccagagc cgaaaaatcc tgatgataga
     3361 gagaaaccgg cacctgagca acctgatgta cctcagccag aaccgaaaaa ccctgatgat
     3421 agagagaaac cggcacctga gcaacctgat gtacctcaac cagagtcgaa aaatcctgat
     3481 gataaagaga aaccagcacc tgagcaacct gatgtacctc aaccaaagcc gatgctccca
     3541 ggtgaaaagg tgaaaccaaa accaactcat cccggtgaag ctatgcaaac aacacctcag
     3601 gacaaatcaa catctcaaac agatgaagta cttcctaaaa caggtgaatc atcatcacaa
     3661 tcatctgctt taatcttcgg tggtttactc agtctattag gacttggttt attacgtcga
     3721 tcatctaaac aaaaccgctc ttcaatgaaa taagcatcac attaaaaaac ccctgattgt
     3781 gcgatgatgt gcaatcaggg gtttcattct atattaaatt tcagtcgtta atgactctaa
     3841 ttcgtccact aattcgccaa tataagcaat cgtatcttta agtggttgat ctgttgtgac
     3901 atcgatacct gcaagttgtg ccaattcaac aggggacata cttccacctg cgcttaatgt
     3961 gttcaaccaa tcttgaacag cagtctcacc ttcattttta atacgttgtg ccataatcgt
     4021 accaattgtt aaaccagcag aatacgtgta tgagtataag cccatatagt aatgcggttg
     4081 acgcatccaa gtcaattccg caccatctgt aattgtcacg gtatctcccc agaattgttc
     4141 gatgacttgt cgtttaattg cattcaaggt aggggcgcta agtgattcac cttgatcgac
     4201 acgttgatat acttcacgtt gatatgcggc ttcaagtaaa tgtgtcacca tattatgata
     4261 gtacgtacga gaaataatcg aagcaattgc ccaacgtttg aaacgtgcat cattactgtt
     4321 tttaaataag taattcaaca ttaacatttc gttcattgtc gatggcgctt caacaaaata
     4381 catagacgcc tcagattgta aataattttg atgcttttgc gcaaatgtaa agtgtccggc
     4441 atgtcccagt tcatgtgcta ggacgaaagc ttcagtcatt ttacctgtcc acgaaataaa
     4501 gatgtagcta tgagatgcat aagggcttgc acaataagca cctgtttctt tccctttgtt
     4561 ttgcgggaag tcaatccaac gtgcatcata cgcttggtgt aacatctcga cgtattctga
     4621 acctaatacg tctaatgcac caaagatgta ttttttcgac tcttcaattg taatttctgg
     4681 ttcaaaagta gggtcgatag agatttttaa gtcttcaaat ttgagttcat ctaaaccgtt
     4741 tgcttgttga acaagtttcg catatttgcg cataattggt gctaaatcag acataattaa
     4801 atcaatttgg cggtgataca tatccaaagt aacatcttgt tcttccaata aatattcaat
     4861 cacagaatca taaccacgca agtcagcctc aagtttttca cgttgcactt gcgcattata
     4921 cactgcagca gtcgtatgtt catacttttt aagggtatcg ctaaaatgac ggaaacttgc
     4981 acgacgaagc gctgtatcgt catgatcttc gtaataacct tcaaatgtcg tataatccat
     5041 gtcatacgtt agaccattga cttcaaatgt tccgaaatca atatctaaca ttttcgtcac
     5101 gccataaata tcatatggca catctaatgc tgttgacata ctcgcaagtg cttcttcagc
     5161 tttagggtgc aattgatgcg gttttttctt ttgtagttgt gttaaataat aactgtaatc
     5221 taactctgaa atcgcttgtt gcatcacagc atcatcaaga tttaatagtt ctgactctac
     5281 aaaagtcaat tggcttaaaa ctttgccata ttgtgtagaa aatagggcgt ttaaacgttg
     5341 tctttcagca tcagacgtat cgacgctatg taaaagttcc gcgtaattac ccgcacgttc
     5401 taattcaacg agcaattgcg catatgtatt taaacctttt tcaagatttt caacggtatt
     5461 gagttggttt tcgtattgca ctttaaatgc ttgagcttct tgcggcaatg atttcagcgc
     5521 ttgttcataa ctttctggat taggatataa atcagtcaaa tcccaagttt ctactctagc
     5581 aacttctgaa cgatgtggta gtttttgtga cataataaaa cctccttaga aaatatatta
     5641 attccattat aacgtttttt aacatctttt tgcatgtgaa atcattacac cagccattaa
     5701 aaatctagta taatgaaggc taaatacaaa aaggaggttc atacatggcc attttagaca
     5761 tgccaaacta tatttggatt acacttctca ttatggttgt tttaacattg ttttgtacac
     5821 ttgtccttaa caaatggttc tttacagcaa tcatcatgtt cattgtgctt ggtgctttag
     5881 cattcatttt gccaaacttt aaaccgattc gttatgaacc tttattaggg tatgctgcgt
     5941 ttgtcgcaat attgagctta attttaagct ttattttatg gtttattaca cgtgactggc
     6001 gcaaaaaacg acaaatgaaa aagtatgaga aagaacgcgc acgctttgaa caacaacatc
     6061 gttcataatg atacgaaccc agtgatatac acaagtcatt gggtttttgt gatgcggacg
     6121 tgatgagatg ctattgatta actgactgaa gataataggg ttaaaatgct aaccgatata
     6181 caacttccta taatatatat tatgtaaact aagaattgga ttcaaattta acattttaat
     6241 atatgtacat aaccaactca tcagtcataa acgtgcctta atgatattcg cagcttaaac
     6301 atcaaaattt ataacaaaca gtttacatca tctggataag cgtttcgatg ttaatggctg
     6361 aatcattcat attaaagcat tgttgtaaca acaatatgta taaatgtcat tgaaatgtgt
     6421 atatgaccat tcaaacatac gtatttgtac ctcaaatgtt agccttcatc agtccttaaa
     6481 tgaccgattt taaaactaaa taatactcta taagtttaca taacataaat atagttaata
     6541 tgaattttca ctacttccgc caaaatatac attaaaattt tcaattgcgc atttttcatc
     6601 caaaataaaa agccagtcgc tttgcattac acaaagtacg ggcttttcat cgtttgttta
     6661 tcgtttaatt tttgagcgca atcgatttaa cacatcaaat acgaaatatt ttactttatg
     6721 aattggttta tagaagtctc caacgagttc ttcaatttgt acaccgaatc cacgtttaaa
     6781 gcgatacaca ccatagtctt cactattctc agtgaaatcg cctgatacgc cataaaagtt
     6841 atagcgctca taaccatggt caaagcaata attaatcata aaccaatgca tcgcgtaagg
     6901 tcccataaag tgattgtatt tctcactaga accgccagag aagtaattaa tttcatacgc
     6961 attcgcaaaa taaacacctg ctgctaagtt taaaacagag ccgtccgttt tacgcaattc
     7021 gctagctttt aacatctctt gttgatcatg gtcgatttgt ttatctaatt ccgcaatttt
     7081 cttaatttgc ttatccgact tgttttcatt cgccatcatt tggtcacggc gtgtttcttt
     7141 gtcatttaaa ctttcttgca acgacgtaat atactcatct agatcaatat atgctaatgg
     7201 tacgagcgct ttatgaccat atgtgttgat aaagttttta aagtattcgt ccgttttaga
     7261 cacaaaacct gcacgttctt cagtttcgcg atataactct aaaaattgat caaattcatc
     7321 cacttcaaga aatcttactt tcacgccaaa attcgtcgct ttattaatat tacgtttgcg
     7381 ctggctatcg aattgcttct tcaacgtttg tggtgtatga ccttttaaat ccaatacacc
     7441 catccatctc acttgacttg acgtatcata ggatgttgta aaaccgtgat gacggtaacc
     7501 gtgtgactta aatagctgta ctagcttatc gttaggcatt ttgtcgccca tgggatgaat
     7561 gtctttatca tacacttgat aaatccaata cgggtccatt ttgacatata aacatttatt
     7621 tctatttaaa tattggtcta attcctttaa ataaaaatcg gctaatccca aatcgctata
     7681 atccatgacc ggaccacgat ttgaataata tacataactt cctgctgttg gaattttgga
     7741 aaataagctc gctgctaaaa cttggttgtt gtcatctttc acgcctaaca gtaccacttg
     7801 aaaatcgtct gcttctcgtg ttgcaatatt ttcttttacc tgaaaataat gactttctaa
     7861 tgcaggattt tgaacaaatt ggtcgtattc ttcaactgtc aattctgtaa atttcatacc
     7921 aataaatccc cttctcttca ctcatcttat cttttaatct tctctttaag ctgttttaac
     7981 gtcgtataaa tcttatagac cggttttcga acgggtttaa taaaatcacc tacgtactca
     8041 atgacatctg cgttataacc ttttttaaat ttgaccacgc cagcatcttc cgcatcttca
     8101 gtaaagtgtc cactaatgcc ataaaagttg taacgtggaa tatggtgttc aattgcgtag
     8161 ttaatcattt cccattgaat ggcatagctt cctgcaaaat gtcggaattc atttgctgtg
     8221 ccacccgcat aatacacgac ttcaaacgga ttaataataa agaaacctgc tgatatcggt
     8281 aacgtgtcac catgtttcgc ttgtaattgc tccgcttctt gaattttagc ttgattcgct
     8341 tctaactgtt gcattaaatt gttcttttta ttcaatgatt tttggttatc tgggcgtttc
     8401 tcaagttctt tttcagtttt agcaatttgt ttatggaaat cttgctcttc agattttagc
     8461 tctggtatat acgttgtaaa atcgatgtaa gctaaaggta cgagtacacg atctttatag
     8521 tgtttgaggc ggtgatagta aaaatcatct tcacggtcca caaagtcttt tgtttccgac
     8581 gtctcttcca tgaacgaacg gaaaatatgt aactcatttt catccaaaaa gcgcactttc
     8641 acaccatttt tttgcacttt tttcgtatta cgctttctca aactatccat attgttcagt
     8701 atatctttcg ccgttttacc ttcaacatct aatacagaat ggaatcgaat ttgtctcact
     8761 gtatcaaatc ccgttgtaaa accttcgtgt tcaaagccga gttgtgtcat tttgtcaaag
     8821 aaccaatcat tttggaatcg ttcaatcact tcgccatcat gattgcgttt taacattggc
     8881 aagtatgggt caactctgac atataacgca ttatattttt taacatattt tgcgagttca
     8941 ttaaaaaaga aatgaacgag ttcttgattt tcataatcca tcacaggacc acggttcgta
     9001 taaaagtatt tgaacacttt catgacgggt actgcagtta ataaacaagc ggctaatact
     9061 tggttttgat tatctttaat accaacgaga tgtgtttcga caccttctgc caccttcagc
     9121 tcgtagttcc ctaccatttg tgtaaaatgg ctgtatggca tactatctgt gaacgcaccg
     9181 aattctgccg tcgttaaatt tgtaaacttc atttttaata ctcctatttc tctttatatc
     9241 ttttagcgat attacatttc tgatataccc ttattacatt atcttaaaaa gacatacaat
     9301 ctttttcatt tccctcataa acacccttat agtctttcta cattttaacg tattgcgtaa
     9361 caattcgcca acaagacgtg gtacgactac agtaatttcg aaaaacaata ggcctctaat
     9421 aatgcttgcg ctgctttaat cgaatccaaa tgcgtccgtt ccattgcatg agaagactca
     9481 atacctgcac cgaaaaggcc gtgctttaca tctgcacctg cttttaacgc cgctgaagca
     9541 tctgaggcat agaatgggta gagatccact ttatacggga tattgtgttt ctgacataac
     9601 gatacgagat gatgacgtag ttgtttatga tacggtcctg aggcatcttg tgcacaaatc
     9661 gacaccgtat attcatcgga cgcttgacca tcccctaatg cacccatatc aaatgctata
     9721 aactcaacaa cttttgggtc aatatttgaa tttgcgccat aaccaatttc ttcattattc
     9781 gaaatataaa actgaatcgt atgcggtaaa cggtcctcac gatgacgata ctgttttaaa
     9841 aattcgataa taatcgcaac actgacttta tcatctaaat gacgcgactt aataaaacct
     9901 gaagctgtca cttctgtacg tggatcaaag cttacaaaat cacctacatc aatacctagc
     9961 tcacgcgttt catcggctga cgtcactttc tcatcaatgc ggacttcaat atgctcttga
    10021 ttacgtggaa tttcatggtt attcgcataa acgtgtggcg acgtttcatg caatagtatt
    10081 gtccctcggt acgtctgacc tgttgttgtt tcaatcgtac agtattcacc ttcaattgcg
    10141 ttgtaacgga aaccaccaat taacgctaat cgaagacgtc cattatctaa aatttctttg
    10201 accattgcgc ctaatgtatc tacatgcgcc gtaatacatt ttttctctgt atcatcgtcg
    10261 ccttttactt caatcaataa gccgcccttc ctcgttaact gtgtgttata accataagcc
    10321 tccacggttt gctgtacata cgctatcgca cggtccgcgt tacctgatgg actattaatc
    10381 gcagttagag ctgttaaagt ttcaatcaca gattcattca ttgatatgtc ctcccttgcc
    10441 tctttgtttc tattgtaccg atgattctat aaaatctcac gtattcatat aagtactatt
    10501 gcaattaaac gcgttaaaat gttaaactat ggcatattta ataaaaatag aggcggtgtt
    10561 agcgtgactc acgtgttttt tgttggttta ggtttaatag gaggcagttt agcaagtaat
    10621 attcaatatt ttcatccaga catcacgatt tcagcttatg atgcacatta cgaacaatta
    10681 gaacgtgccg tatccattgg cattatcgat caagcatctg cagattacga atcgacttta
    10741 caagaagcag atatcgttat ctttgcaaca cctgtacaaa cgacagtgca atatttaagc
    10801 cagcttcctc aaatgaaaac gaaacctggt ttaattgtta cagatacagg gagtacaaaa
    10861 tctactattc aagcatttga aaaggaatta ctctcggctg acatccatct tatcggtggg
    10921 catcccatgg caggcagtca taaatccggt gttctgaatg caaaaaaaca tctctttgaa
    10981 aatgcctact atatccttgt tcatcagtta acagaaaacc aagaggccgc gcaacgtatt
    11041 gaacatttgc ttgcaccgac tcgcgcgcgt tttattcatt taactgctga tgaacatgac
    11101 caaattacag gggttgtcag ccatgtccct catctcattg cttcgagtct tgtacattta
    11161 aatgcttttt acgcagcgga cgtgccatta attcaagact tagctgcagg aggctttaga
    11221 gatattacac gtgttgcaag tagtaaccct gagatgtggc gcgacatatc cattgaaaat
    11281 aaagcgcata tcgtttcatc attgaagcaa ctacaacaac agcttactga aaccgtggat
    11341 atgcttgaac aagggcacga ggaggcgtta tatcaatttt tcgaccaagc taaaacgtac
    11401 cgtgatggcc tacctattcg aggtaaaggt gcaatgcaaa gcacgtatga tctttacgta
    11461 gatattcctg ataaaccggg gatgatttcg aaagtgactg aaatattaag tcagcatcaa
    11521 atttctatac ggaaccttcg aattttagaa gtgcgtgagg atatttacgg tgctttacgt
    11581 attagcttta aaaaggctga agaccgcgac gcagcgatga ccgcgctttc tgattttgat
    11641 acgtatttaa gttaacgtcc cacggtggta tttatatgca cattaggcct gaactattat
    11701 ctccaagcct aatgtgatac cataacgggg ctttttacat ctgatgccct gccattaatc
    11761 ctaaacgacc gtatttggta cccgcttcag tcaaggaaat cgcttttgat acgacgcctt
    11821 ttccatattt ggtttgtaac gcatcaatcg ttttcgccaa cttctcttga cgcagtcgtt
    11881 gaaattcatc cgtaaacaaa tctagattgc gttcgttttc attcatcaat tgtgtaagtg
    11941 atacactgag cgtccgatac aacgctcctt gatcacaatg catgtccgct aaacgcttca
    12001 cttctttata aatgtcttga tctaaatttg ttcctgtatg taacgtatac tgcttcgtca
    12061 catggccgcc ctctttgtaa cccatagaaa aatgaattgt tcgtgcaatt tgctgacgcg
    12121 ctctcaaacg ttgtgccaca tcttcaatca attcttgcat gacgacatgt gcttcacgat
    12181 acgtataatc acgtagcaaa atttgacttt tacatatcga aggattaatg atttgatacg
    12241 cctcattcat ccgactttga tctatcccgt gtgcatgtag atgccaatcc acccctaaaa
    12301 taccgaagtc ccgcttcaaa tattcatatg gatagtgtgc cagttgtcca attttaaata
    12361 tccctctttg atttaatttc ttctctgtct ttttaccaat accccaaaac gaactgagcg
    12421 gcgtaatttc ccacactttg tcaggtacat cttgatagcg ccattccgca atatcatccg
    12481 gatgtttttt cgcctcatga tccagtgcta atttactgag caacatattc gagccaatcc
    12541 ctatcgcgca atgcactttc gtttcatcat aaatttcttt aatcagacgc tcacaaaacg
    12601 tatgtaacgt cgtattgaag tgataataac tctttgtcac atccataaag aactcatcaa
    12661 tgctgtactg atgtaaatct tcaggcggca catagcggag tgcaatttca gaaattttaa
    12721 gcgacacttc caaataacgc cgcatactcg gattaataat ataaatgtca ttatgatgtg
    12781 gaatttcaaa caaacgcgaa cctgtctgaa tccccatcgc tttcagagaa ggtgtcgcag
    12841 caagtacaac agacccttgc cttttcgtat ctgcaacgac tgcgagtttt gtcgtcaatg
    12901 gatcgagccc tttctcaata caagacacac tcgcaaaaaa acttttttga tcaatacata
    12961 gaatgtccct atcttctaat aaatgataat catacatcac atttcaccct tacttatcaa
    13021 cctgatgttt ttagtataca cgaacacttg ttctataatc aagttaaaac gaatgtacgt
    13081 tctgttaatc ataaaaaata aaggtagcta cggtaatata ggaccgcatc taccttaaag
    13141 tcatgccatt aacgatgata tggaatgacc gcttcagttt cctcatcaac gccataatca
    13201 atataaacat gtgtattgag gtaaacttga cttttatcag atttgaaatt caatgtatca
    13261 gggtgaaaat gaaatggaat ctctttttct tcaccgacat caatgataaa cgcttcgtct
    13321 atctcaaagc gattcaattc atgcgaaatc gttgtaaaat cactcgtttc atcatcattc
    13381 tcatattttt caatcatcgt taatacgata tgattcactt tttgatcact ttgccctgct
    13441 tttaaatgga ttgttccggc aatcgcatca gatacatcaa acgtttgctg ttctaatcga
    13501 ataaacactt tcataccatt gatgcctaga gatgttaata cgttgtcaaa acccataaaa
    13561 tccctccata tttcatttct ttactcttat cataccgggt aatgattcta tcgtgcaact
    13621 atgagggaaa atggtataat ataggtaaag tattaggagg taggaacatg ccaatagtaa
    13681 cagttcaatt attagagggg cgcagtgacg aacaattaaa aaatttagtt aaagaagtga
    13741 caaatgctgt ggaaagtaca acccatgctg accgtagtgc aatttctgta gtcattcaag
    13801 aaatgaaaaa agaacattac ggtgtcgctg gcgtacgtaa atctgaccaa taaaatcaaa
    13861 gcacatacaa aacgagcctg agcgaaacac tcagactcgt tttatacttt agtcttccaa
    13921 aaaggcttta attctctttt tattttcagc tttatcaata cctaaagctg atcccccatc
    13981 attcgtcgta atattttcat agctgccttt tacgggtaca ctgagggttt taatatcttt
    14041 atctcctcga acgataaaac tgaatcctgt ttgataaatc gttgaatccg gcatatcggt
    14101 actcacataa ccacgcataa tacctgcgag cttcggtgct ttgaaaatag atgaaggttg
    14161 aaccaattgc tgctttaatg ccgtcatgac ttgctgttgt cttcgcacac gcccaaagtc
    14221 accttctggg tcattacgaa aacgcgcata accaagcaac tctttaccat ttaagcgatg
    14281 attccctttt ttcaaagata caccaatttt ttcggacata tctttttcta cgttaatcgg
    14341 tatacctttt ggcgcaagct catcaatcat agcttcaaag cctttaaaat ctaaagtggc
    14401 gtaatattcc ggatcaatcc ctaagttcga ctttaacgtt tggcgcaata gctcaggccc
    14461 acctaacgaa taagccgcat taattttata actgttgtat ccaggaatat cggcataaat
    14521 atcacgcatc acagagacga ttttcatatc tttcttaata tagtcatatt gtgcgaccat
    14581 aatcgagtca gtacgtgata ccccaccatc ttcacggtca gcacctaaaa tgagtacggt
    14641 tgctttacca tcattttttg atgcgccatt gaatttgtgt atctttggag cttgatgctt
    14701 gtccttagca acttcaagtc cgtttttgta acttgaaaca gcatacacga cagaaacaag
    14761 aatgataagg atcaacgcca atatcacaaa tggcagtttt cgtatctttc tcttttttcg
    14821 acgtttcaat gttttctcag aagagtttga ggtgctacga ttcaaattgt tttctttcat
    14881 cttatcaacc ttatatcttc aaaattgtgt acttatgtat tataattaat acacactaac
    14941 gttatataaa tttattttaa aaatcaagta aaaacaataa aaatggtacc aaggtctcat
    15001 atagggaagg atgtttagat gaatatcaac acagcatatt tcgcaggcgg ttgtttttgg
    15061 tgtatgacgc agccgttcga tcaaaacgaa ggcattgaaa aggtaaagtc tggatatatg
    15121 ggcggacacg tagatcatcc gacatatgaa caagtgaaat caggcgatac aggacactat
    15181 gaaactgtaa aaatcgaata tgatgtcgcg cttttttctt accaaaagct gttagaaatt
    15241 ttcttctcag taatcgatcc gacagatgac ggtggccaat tccaagaccg tggttcacaa
    15301 tatcgtactg caatttttta tactaatgaa gatcaacgtc aagtggctga agcgtatatt
    15361 gcttcattag agggcacatt caatcacgac aaagcgattg caacaaaagt gttacctgct
    15421 tcagaatttt atgaagcaga agcctaccac caagattttt ataaaaagca acctgagcgt
    15481 tttgcacaac aagaagcaga acgtgaagct tatgctaaag aacacggcat tcaataacat
    15541 atgcaaaaag gctaggaaaa cttaatgtcc tagccttttt ctgttataca ccatgaaaaa
    15601 gcaccttcat gataccacca taaaattgta cacacctgtt taaatacacc cgctatcatt
    15661 caagggcttg ggcatagaaa actttaaacc tcaatccata cataaattta ggaagggcaa
    15721 gtttaacaaa aataacgcaa cgatagcatc aaaagctttt atgtccaagt ccctaattta
    15781 aatctatatt ttctttttac gaatcacccg tgtgactttc aacaaactct cccacgcgtt
    15841 ttgaccccgg tgataaatga gaaaacgtga ttcccaatct ggattaaatt tacttttata
    15901 ttgacgcaag ccttgaaaac tatacaaacc attaaaatgt tcgtaaaaac ggccagcaaa
    15961 cttttctctt aagtgaccat atggcacttg accaacattt gacaaagttg ccatgcccat
    16021 attaaagcgt tcgtaacctt ctgcttgtgc ccacaaaatc atatgcaaat aaagcgcatc
    16081 cataaacggc aatcccaaag acttatccca acgaattaag tcgaccgaca ccgttgttga
    16141 accttctaca ggcatcaatg tacaaaacgc atcgatacga ccttcttcat ttttcaacac
    16201 agcaacgggt gccgcattga cataagaagg tgtaaaacga ccgactgaga aataaaattc
    16261 ttgctgtttc cctaaccaat tacgactaat gtcatggaga cgttcgtatg tcgcttcatc
    16321 taacggtgta tcgagaatct caaactgata acctaacgac tctaatttat ttaatgtcgc
    16381 acggaaacca cgtcgcttct tccctgcaac ggtaaagtca gatactggaa tgagcgcttc
    16441 ttcacccaat ttaaaaaact gattgccgaa atcatgatat aacgtcaaat aattattaga
    16501 aacttgataa aaaatgacat cgccacctaa atacgttgca tattcataaa actcggttaa
    16561 cagtgaatag aagtccgaac tgttacccac tggatcacca agtacaataa atgaactgcg
    16621 atcgtgacgg tacatgataa atgccgtttt ctgttcgttc acaaacacaa gcttgtcttc
    16681 actatacaac aaatgactca gtagatggcc accatattgc tttaaaatgg cactggcaat
    16741 ttgtcgatca tgcaactctc ttggacgacg ataattccat tcaaagatat aaatgagcac
    16801 aactaccaaa atcgtcatac cgataatcga caaccaaaac gtcgaacgca gcaagaagaa
    16861 atcaacttta ggcggtaaca catcaagtgc gaataaaaaa tcacgcacga tgatttgatt
    16921 gaagtatagc aaaatgacac taatgacgac catcgctaat atacctttca tgcgtacagg
    16981 tcgtttcaat acacgtgatt tacgataagc aaaaatcaat gccgctaaaa ttaagacaat
    17041 gatcacaact aacaatgata atccgtacac gtataaatta gatagtaaca agataatcat
    17101 cgctacaatc gcaaataaaa tcgcgcgttt acttcgtgca acaattccgc gtaaattgag
    17161 taataaaatc aaactcgcac taacgttgaa tatgtacaac aatgtaaaca ataaatgagg
    17221 ttttttgtta gctgcatcaa aaataataga gaaattgtta agtaataaaa tcaaactcat
    17281 cataaatact aatgtactca atgctaatga tggtactaag ccaactaagt ctttttgaaa
    17341 cgattttaaa aacccagaca attctttagc cggtaaaaag tatttggatt caagcatata
    17401 tttacgtgct gctgtaccaa attcaaatac agttaagaca agcgcaatga gtaacgggaa
    17461 gaaataatac gcaaaacgat aaagtaataa ccctaaaacg accttttctt ccgctactcc
    17521 gagttgttgt agtccaagta agacgatgag gtcaaacgcc ccaaagcctc caggaataaa
    17581 cgacaacaga cctgaaatcg ccgcaacaat gaaaatactt aacacgattg gaaatgaaac
    17641 attcacgcct acaagcataa aagagcagta aagcacgata ctcgcaagca accattccat
    17701 gctcgataca aaagtgaata cggaacctaa ccaacgcgca gaccgatcaa ccggtgatac
    17761 ccatgaaata ataataaaaa cgggtaataa aaacgctaca atatagagaa aaacagtaaa
    17821 ccataccgat gtccgatcta aaaaactaac atctaagaca tgcgtcacaa tgagtatgga
    17881 taaaaaactt aaacctgtta acatggacgt caacatgtat gaaacgaatt tgactaactt
    17941 tttacgttca gtcgtatacg aaccataaaa ccacaatcgt acgctcgcac caataaaacc
    18001 gccaaaaccg ataatattgt tgaacgcatt aataatatag ccgacacgta atgctttaaa
    18061 ttttgataaa gataacttaa agcgcgtcgt caaaatcaca tcataaagtg ataacaaaat
    18121 caccgaactc ccgccgagta aaaaaagact gaacgtttcc attcggctaa tttcattaaa
    18181 taaaagaaag acacgtttaa aatcaatatg tgctaattct cgtcctaata tgatagaaat
    18241 cgttacaatc aaaaagagta taaacgcaat tttgaaatat tttaaccaaa gctgttttgt
    18301 catgaatagg ggtcctttct ttagtgtaat gactgtgtat gcttataaaa agagattgag
    18361 cttcacaaaa ccgcccaatc tcgtcatgtt acactcattt aatctttact atattcctct
    18421 ttaggcatct cataagggcc tgcatcatcc gcataatatt tattgtagcg acgtttgaac
    18481 agtaggaaga tatgcgaaac aagtactttt aaaattgcat aacttggaat cccaagaatg
    18541 acgccgacaa cgccgagtaa gttcccagca cttaaaagca caaagataat cgttaaagga
    18601 tgaatcttca gggttttacc cataatatta ggtgaaataa agtgcccttc aataaactgt
    18661 actgccgtcc ataccacaat caacttaatc aacataaacg gtgatgtaat aattgaaatg
    18721 ataatcgctg gcgaaatagc aatcgtaggc cctaaataag gtactacact cgtaacagct
    18781 gcgatactgg ctaaaattaa agcatagtct aaaccgataa tcgaataacc aataaacagt
    18841 aaaataccga tacaaaatga cacgataatt tgtccttgaa tgtatgagcc gacttgttca
    18901 ctcattttat ccaacaaatc gtgtacatct ttacgaaatt ttggcggtac aattttattt
    18961 gaaaactctt taaaacgatg accatctttt aacatgaaga ataacacaaa cggtaccgta
    19021 atgataacga ctgtaatatt cacgacagct tcagcgaaaa cacgaatttt agaactcaag
    19081 ccatctgcaa aagtagggat cttctcctgc aaaccagtca cagccttttc aatttgtgaa
    19141 tagtaatccg ataaaaacgg aatgtgcatc atgttgttag cgaatgatgt caatttgttt
    19201 aaataattcg ggaaattgtc catcaagcga tcaaattgaa aagatacaat cggaattagc
    19261 aagttcactg cgatagtaat cataccaatg attcctaaaa acaaaatcgt aatgccccaa
    19321 atacggttaa tattgtatcg ttccatcaaa ttaatgacag gattgaataa gtaatacaga
    19381 atgagcgcga taataatcgg tgctgcaatc gtattaaaaa tgataataaa gggttgaaaa
    19441 atatatgaaa cgcgatcgaa tataaaaatc acaattccaa ctaaaataaa aacgagtaac
    19501 gcaaaaatga gatctttgcc tccgaaaaac ttcatgaaac ggctttctcg gatatcaatg
    19561 ttttttgaaa ctccattttg cttatgttga ttttcagaca tatcattcac caagcctttt
    19621 cgaaattact tatagtttat cgtttttcac gtcagattga aacttaaaac ctattatatc
    19681 aaagtatttt tctaggtacg ccgttttaat gacatcatct attcatttca gtcgtatgta
    19741 tctttcaaat aatcggacaa gatctcgagg tttcatcacg tacacaccaa atgaatgcac
    19801 agtaagtacg aagcgaagag aataaacgca aaaaagacta ggacaacatc ctagcctctt
    19861 tgttagttac aacttagatt tcaaataact tgtcaccatg tttgacatct ttcgcctctg
    19921 taaattttaa cgctgtcact tcggattgcg tcacaataat cggcgtgata tcacttttcg
    19981 cagatgcgcg gataagctct aagtccactg tcattaaatg atcgcccgct tttatcgttt
    20041 gaccttcttc aacatgaact gtaaaccctt caccgtttaa ttttacagta tctaaaccaa
    20101 catgaatcaa taattctaaa ccattgtcag acactaggcc gaatgcatgt ttagttggga
    20161 aaatcatttg aatcttacca tcaaatggtg catacacttc accactcgtt ggacgaattg
    20221 caatcccttc acccatcatt ttttcactaa agacttgatc gggtacttca gataatggta
    20281 caacctcacc atccattggc gcgacaactt gtcctgtttt cgtaacagcc gtcgtgtctg
    20341 cagcttcatc aatcacaact gcttcgtcct tatcttcatc taaatctaca gggtgttgta
    20401 cagcttgacc tgacataatt tgttgcattt cgtgtttgat ttggtctgat ttcggtccga
    20461 aaatcgcttg catattgttg ccgacttcta aaacacctga agcacctaaa tctttcaaac
    20521 gtgctacgtc gacttttgat ttatcgttca cttcaacacg taatcttgta atacatgcat
    20581 ctaaatgctt gatgttatct ttgtcaccca tcgcttgtaa tacagcataa ggcaattcgc
    20641 ttgcagtcgt tgtcgtcgtt tcagtttgtt tatcctcacg tcctggcgtt ttgtaattca
    20701 tcttcgtaat taagaagcgg aagattgaat agtaaataac accatacaca agtccgactg
    20761 gaatcacgag ccaccaatgc gttttatttg gcaagatacc gagtaataca aagtcgataa
    20821 agccaccaga gaatgtgtaa cctaaatgta aatcaagcaa gtataaaatt aagaaactta
    20881 aaccgtctaa tatagcatga ataaagaata ataatggtgc tacaaataaa aatgaaaact
    20941 ctaatggttc tgtaatacct gttaagaatg atgttaatgc tgctgaaccc atcaaaccgg
    21001 caactacttt tttgttttca ggttttgcag tatgataaat cgctaatgct gcagctggta
    21061 aaccgaacat cattactggg aattcacctt gcatgaattt acctgctgtt aagtttgtac
    21121 cttcacgaat ttgttcgata aagatacgtt ggtcaccacg aataatttca cccgccatat
    21181 ttgtatatga accaaattca aaccagaatg gcgcatggaa aatatggtgt aaaccgaatg
    21241 gaattaataa acgcttaata aaaccaaata aaaagactgc taaacccgtg ttggaatcta
    21301 ataacccttc actgaatgcg tttaaaccat tttgaatcac tggccaaacg agtgccattg
    21361 ggaatgcaag taaaaatgat gttgtcgcca tcacaattgg tacaaatcgt tttcctgcaa
    21421 agaagccaag atatgacggt aacgaaatgt tataaaactt gttgtaacac catgccgcga
    21481 gagcaccgat aatgataccc ccgaacaccc ctgtttgtaa tgtcggaata cctaagacgc
    21541 tcgcataacc tttcgcagcg tcacccacgt tgtcaggagt aacccctaaa aattcaccca
    21601 tcgttttgtt caaaatgata aaaccaacga aagctgcaat ggctgcaacc ccgtcaccgc
    21661 ctgctaaacc aatcgcaaca cccatagcaa aaataattgg caagttttca aaaatgatac
    21721 taccggctgc tgccatcatt tctgcgacgt tttgtacccc atcagcttga atgaatggta
    21781 aatacgattg cagttgttcc ccttgtaatg ctgcaccgaa tgcgagtaac aaaccggcag
    21841 ctggtaaaat agcaacaggt aacattaatg ctttaccgat acgttgcaat tgtccaaata
    21901 gttttttcct cactgtaagc cctcctattt tgttgacaca acacaaaaaa tgcatgagta
    21961 aaaagctgcg agcgttttgc ccacaatttt caactcatgc ctaatctcac ttagtaacac
    22021 gttttatgat tgattttgag atgccagtga cagttgctga atgtgcatcg ttaaatatgc
    22081 gacttcggct tcgtccactc gtacatcaat ttgtgattgt atcattttaa ctattttaac
    22141 agctacatta tagcataacg gatattgtgc cttcaatagg ttttcaaaac tcagttcaat
    22201 tgtcgtacgt tcgccttttt tcaaccgttg taacagaaaa tgaatatgtc tcacaaaccg
    22261 ttgatactga atggatgcaa ctggaatttg tattttcata tcattttcaa tcattcgaat
    22321 cgcattgtta atcaacttcg gtacatattg catttcactc aaatcaatat catctgtttg
    22381 agaggcaata tgcagcgcaa taaaaccaac ttcatcttct ggaaagtctg tgttcaattg
    22441 caagttaata cgcgccacta cttttttcgc gattttatac gcttctggat aactgtattt
    22501 cgtctcactt aaaaacggat ttttaattaa ctgtcccttt tccaagcgtt tcaatgcaaa
    22561 aattaagtga tcggttaagg agacgataaa tgattcttca tgatgcagtt caaaatgcgt
    22621 cattataatt tgtacagaat caatgaccgc acgtaagaca cgttcatcgg tatgtgccac
    22681 taacatcttg taatggtctt gttcattttt attttctagt ttaaacactt tttcaatcgt
    22741 atcaagatca ttgattttca tccctggctt tttgttaaat ccaagacctt taccaatgat
    22801 aacgacttct gattgttgat attcgcaaat gagcacgtta ttgttgagga ctttttttat
    22861 cgtatattga ttcactttta tgtcacctct tcaaagtaca attcaaatca tataacgaaa
    22921 tgactataat tgaaagcact aattttcgaa gttgaaattt gtacaacact ttttatttat
    22981 taatatatag tattgttcgc ttcatcatag tagaaaacgt ctataaaata aaagggctac
    23041 aggcaaaatg ctgccccagc cctctacaaa ttaatcttct tttttatttt tatggatggc
    23101 gttaccccaa gattcgatac caaataaatt gatttctaaa ttttctggtc tgaaaatcgg
    23161 acgcttgcct tctttacgtt gacgttgata gtctcgcatg actgcaaaag caatattgga
    23221 caggccgata atggcgataa tgttaacgat agccattaat cccataaata cgtcagcagt
    23281 attccaaact gtttcagtct ttacaacagc gcctacgaat acgagaataa cgacaaaaca
    23341 acggaaaata aatagcacaa ccttattagt agataaaaat tcaatattag attgtccata
    23401 gtaatagtta cctataacgg atgagaatgc aaataatgca acagctatag ataagaatac
    23461 gccacctgca ctacctaagt gttcgtttaa agcagattgt gttacggcaa caccttgtgc
    23521 ttcaccttca ccaaatttca agcctgaata taataaaatc ataatcgctg tcgctgtaca
    23581 aactaaaatc gtatcaaaga agacacctaa tgattgaatt aaaccttgct tgacagggtg
    23641 tgatactgcg gcagttgcag ctgcgttcgg tgcagaaccc atccctgctt catttgagaa
    23701 aagaccacgt ttcacacctt gtagtacagc gaaaccaact gcaccacctg ttgcctggtc
    23761 aataccgaaa gcacttttaa tgattgtaga aatcatcggg aaaatttgat cgatgttcat
    23821 cactaaaatg actaacacga ttaaaatata aataatcgcc atcactggta caatcactga
    23881 tgataatgtt gcaatacttc gcacaccacc gaaaataaca atcgctgtaa taactgctaa
    23941 aatgatccct gtcaccaacg gactaatgtg atattgcgta tttaatgact cagcaatcgt
    24001 gtttgattgt actgtgttaa atacaaacgc gaatgtcaca gtgatcaata tcgcaaataa
    24061 aacacctaac caacgttgat tcagcccttt tgtgatgtag tatgcaggac caccgcggaa
    24121 gcccccttct ttatcaggta ctttataaac ttgtgctaac gttgcttcga taaaggcact
    24181 cgctgcacca atgattgcaa taatccacat ccaaaatacc gcaccaggac cgccaagtac
    24241 aatcgcagtt gccacacctg caatattccc tgtacctaca cgtgagccgg cactaatagc
    24301 gaaagcttgg aatgacgaaa tccccttctt accactttca agagtttcgg atttatcggt
    24361 taatgcacga aacatctcag gaagccatcg aatttggacg aattttgaac taatcgagaa
    24421 aaacaagcct actgtcaaca gtaacccgat taagtattgt gaccaaatca agtcgtttcc
    24481 tatttgaata aatgctttaa accaatccgg aattaaacta tcaaaatctc tcactcgaac
    24541 ccctctttac tcttcagttt aaatgtcagt gtcattttaa aataactagt ctcattttat
    24601 catcattgtg caaaagtgac tatctatttt ttaatactag tccacatata ggtcttcaat
    24661 ttcaccgaat gtactcgtat caaccacaaa actaccattt gtgtactgtt ctgacaagtg
    24721 aatgtcttta atcaatcctg ttgtctcatc ttgttgagat acaagtcgat attgtgactg
    24781 ctcagggcga catactcgtg ctgcaacgac gcggtgtggt tgctttttca actcttttaa
    24841 taacgtaata ccacgttgtg cacgtttcgc ttgttgtaac actttaaaac caatgcgctt
    24901 caatgcaccg cgttgtgtcg caattaaaat cgtgtcttct gtttgaatgt gatcagctag
    24961 gacgacatga tcttcgtctt ttaggttaat tgctttaatc cctgttgcac gtaatccagt
    25021 atctggcagt tcagacatcg gataagtcag tgacatgcct cggtgtgtta acaatgtaat
    25081 gagttgcgac gacgcatctg ctggcacaag catcactgaa atgagcgcat cgctttcttt
    25141 cactttcatc gctacgagcg gctttgttgt ccgtgttgac ttaaagccag acaataaact
    25201 tttcttaatc ataccttgac gtgtcgctgt aatgattgcg cgctcatcat tgaattcaga
    25261 cacagtgtaa caatctacca cacgttcatc ttcttcaatg ggcacgattt gagatacatg
    25321 ttgacccaaa tctttccatt tcacgtcagg caatttatgc acaggtatga gcaagtaacg
    25381 tcctttattc gtaaagacca tcgcgtaatc ttgtgtattg gtttcaatga ttttcaacac
    25441 tccatcacgc tcttttaagc caatttcttc tttaccactc gcattgaaac ttcttagcga
    25501 tgtccgttta atataccctt cttgtgtcag acttaacatg actgtttcac ttggaacaat
    25561 cacttcttta tcgattttaa tttcagaaat tttctcttca atgaccgaaa ggcgtggttg
    25621 tttaaattgc tttttgattt cagataactc ttctttaatc acatcgagta acgcatcgtg
    25681 attttctaaa atatgtttca atgccgcaat tttttgtttg agtgcatcat actcttcttg
    25741 cagtgccaca atgtcggtat tcgttaaacg ataaagttgt aacatcacaa tggcttctgc
    25801 ttgcgcttct gtaaagtcat acgttttaac taaattctct ttcgcatcac gcttattttt
    25861 tgaatttcga attaatgcga tgacttcatc tagaatagaa agagccttca ttagcccttc
    25921 aacaatatgc atgcgctctt ctgtatgttt taaatcaaag cttgtacgac gtgtaacaac
    25981 ctcaatttgg tggttgagat aactactaat aatcggcttg attcccatta atttcgggcg
    26041 tccttccgta atcgcaacca tgttgaagtt gtacgccact tgtagatcag tatttttgta
    26101 taagaagttt aaaattgatg tcgcattaac atcttttttc aattcaacag cgacacgtag
    26161 accacttcga tccgtttcat cacgcacttc gacaatccct tccacctttt tgtccgcacg
    26221 taactcatca atctttttca cgagactact tttattcact tcgtatggaa tttctgtcac
    26281 gataatttga ctacggccat tacgcaacgt ttcaatgtca gctttagcac gtacaacgac
    26341 tttcccttta cctgtttcat aagctttttt aatgccatcg atgccttgaa caataccacc
    26401 tgtcggaaaa tcaggccctt taatatattt catgagctgt ttcactgtca gatcaggatt
    26461 gtcgatatat ttcaacgtcg ccgtaatgac ttccgctaag ttgtgcggtg gaatatccgt
    26521 cgcgtaaccc gctgaaatcc ctgtcgaacc attcaccaat aaatttggaa agcgtgccgg
    26581 taagaccata ggctccattt cggtatcatc atagttcggc acaaaatcga cagtatcttt
    26641 attaatatca cgtaaaattt gttcagataa ctgacttaat ttcgcttcag tgtaacgcat
    26701 cgcagcagga gggtcattat cgatactccc gttatttccg tgcatttcaa cgagcacgtg
    26761 acgtaatttc cagtcttgac tcaaacggac cattgcatca tacacagaaa tatccccgtg
    26821 cggatgcaac tgaccaatca cgtccccaac tgttttggca cttttacgaa aatgtttatc
    26881 atacgtatta ccattcgaat acatcgaata cagaatacga cgctgcaccg gtttcaatcc
    26941 atcgcgcaca tcaggcaaag cacgctcttg aatgatgtat ttactgtagc gaccaaaacg
    27001 atcaccaata acgtcaacta aaggtaaatt ttggatgatt tcagccatta tgcgtcctcc
    27061 tctgcaatat cgtcatctga taaaatttga atttcttcat tttctaaaat acttagatct
    27121 tcttgcatac cgaattgaac atggcgctca atccattcac gtctcggtgc tactttatca
    27181 cccatcaatg ttgagacacg ttgcgacgag cgaacttcat cgtctatttg cacacgaatc
    27241 agtgtacgtg tttcaggatt catcgttgtt tcccataact gatctgggtt catttcacct
    27301 aaacctttgt aacgttgaag cacgaaacct ttacccattt cacgttgtaa cttttctaat
    27361 tcttcatctg tccaagcgta tgcaatcttt ttatttttgc ctttcccttt ttctaactta
    27421 taaaggggtg gtaaggcgat gtaaacacgt cctgccatca caagtggtct catatatttg
    27481 aagaagaatg tcaataacaa tacttgaatg tgcgcaccgt ctgtatccgc atcggtcata
    27541 ataataatgc ggttgtagtt gctgtctttt aagttaaaat cattccccac gcctgcacca
    27601 atcgtatgaa taatcgtatt aatttcttca tttttaaaaa tatcttctaa acgtgctttt
    27661 tcagtgttaa tgactttacc gcgcaatggt aaaatcgctt ggaatttacg gtcacggcct
    27721 aacttagcag atccccccgc tgagtcacct tcgactaagt acagttcatt tttttcagta
    27781 tttttacttt gtgccggcgt taatttaccc gataataacg tgtctttacg tttattcttt
    27841 ttaccagaac gtgcatcttc tctcgctttg cgtgctgctt cacgtgcttg ttgtgctttg
    27901 attgcttttt taacgagtga tttagacaat tgcccctttt cctctaaata aaacggcaat
    27961 ttctcagcca caatcgcatc aactgcactt cttgcttctg gcgtgccaag tttagacttc
    28021 gtttgacctt cgaattgtaa taaatgttca ggaattcgta ctgaaataat agcagttaaa
    28081 ccttcacgaa tatcattacc ttctaaattt ttatctttcg ctttcaaatc gccaattcga
    28141 cgagcatatt cgttaaatac acgtgtcatc gcagttttaa aaccaacttc atgcgtccca
    28201 ccatcttttg tacgcacatt gttaacgaag ctcataatac tttcagagta ctggtcgtta
    28261 tattggaatg acacatcgac ctcaatttca ttcgctgtac cttggaacaa agcaacatca
    28321 tgcagcactt ctttaccttc attgacatag ctcacaaaag ctttaatgcc ttcttcgtaa
    28381 tgatacactt cgctacgttc ttttcctaca cgacgatctt ctaatgtgat ttttaaattt
    28441 tgcaataaaa atgcagactc ttgaagacgc tcacttaaag tttcaaaatt aaagcttgta
    28501 gcagatttga aaatttcagc atctggctta aatgtaacag ttgtacccgt ttttttcgtc
    28561 tttccttttt taatcaattt cgtctgaggt acgccaccgt gagcgaactg ctgttcaaaa
    28621 atttcgccgt cacgatgaat ttctacagac agtgattcac ttaaagcatt tactaccgat
    28681 gcccctacac catgcagacc acctgacgtt ttgtagccgc cttgaccgaa tttaccacct
    28741 gcgtgcaata ccgtaaaaat cacttcaaca gtcggcttac ctgaacggtg tgtccctgtt
    28801 ggcatgccgc gaccgttatc cgccacagtg atgctttcgt cttcattgat tgttacgtta
    28861 atttcgttcc cgtaaccatt taaaatttca tctacagagt tatccacgac ttcatatact
    28921 aaatggtgca aaccgcgctt atctgtagaa cctatgtaca tgcctggtct tttacgtacg
    28981 gcttcaagtc cttctaaaac ttgaatcgca tcatcagagt aattattaac cttttttgca
    29041 gacactcaat tcccctccta caaacatacg ttcgtttatc aaactataca atagctattc
    29101 ttatataaat
//
LOCUS       DANHPA010000017        28820 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.017, whole genome shotgun sequence.
ACCESSION   DANHPA010000017 DANHPA010000000
VERSION     DANHPA010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 28820)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28820)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28820
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.017"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            108..416
                     /locus_tag="PTC28_000613"
                     /pseudo
     CDS             108..416
                     /locus_tag="PTC28_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000504985.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            426..1199
                     /locus_tag="PTC28_000614"
     CDS             426..1199
                     /locus_tag="PTC28_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDK5715931.1"
                     /translation="MRRMLSNISSKSLGKYQPVESEYDLTCEKCGRKYDWFKFANGYE
                     YKDGCECEIQKQAYEERKRNEQRKLNYIFNQSNVNPSLSTATVNNYKPQNENQVQAKQ
                     TAIEYVKTFSIDKPKSLILQGSYGTGKSHLAYAIAKAVKKQGYTAAFMHIPMLMDRIK
                     ATYNKNATETTDELVSLLSSIDLLVLDDMGVENTEHTLNKLFSIVDNRVGKNNIFTTN
                     FSNKELNQNTNWQRINSRMKHNARTVKVIGDDYRERDAW"
     gene            1193..1372
                     /locus_tag="PTC28_000615"
     CDS             1193..1372
                     /locus_tag="PTC28_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715932.1"
                     /translation="MVITSITKEFLKENLECSDVYAQKMLEWAQGDDKKLYDLFIQKR
                     VERNTRQDMTILEVD"
     gene            1430..1804
                     /locus_tag="PTC28_000616"
     CDS             1430..1804
                     /locus_tag="PTC28_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002499247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HDK5715933.1"
                     /translation="MGSPRPRFRRVKQFVQTYMPTHYTKHKNFIADQMPDLKSERDIK
                     LTVGFYFPPLKSWSKKKLTAMLTRYKNTKPDLDNLLKTVLDAGNGKLWNDDNQIVEIR
                     TFKKWSETARTVLIIEELNDDE"
     gene            1797..2015
                     /locus_tag="PTC28_000617"
     CDS             1797..2015
                     /locus_tag="PTC28_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715934.1"
                     /translation="MNKMYNLYNSNKEPVVVVSRNIDGQYHIKGLDNTQLAHINRTTD
                     DIDGFKSTFNLLSFEELGQLDLTELLDF"
     gene            2026..2334
                     /locus_tag="PTC28_000618"
     CDS             2026..2334
                     /locus_tag="PTC28_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715935.1"
                     /translation="MAQKLEIFTKEQEEKMKQNGIPRAIARSRVRRMGWSPEEAVTTP
                     IREKLVSYTDFPKPPTPPKVAYMRFMDSRKDKSHLVKYPQSVEPSDFYKYLKRQVLWS
                     "
     gene            2730..3215
                     /locus_tag="PTC28_000619"
     CDS             2730..3215
                     /locus_tag="PTC28_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3310 domain-containing protein"
                     /protein_id="HDK5715936.1"
                     /translation="MEIKDLKIGDKVSVEVGSQQFKDTDDEKWVYETIFGTAEVTKVN
                     ETYEYANVIFENGTYGEINADVEWYPIPSNTKIATHETSEINKPHHYMFEDGTEAIKI
                     INMIVKRYKQSIVAAQIYNAIKYIIRAPFKNGVEDLKKAKESINFAIKFWDDKEMEYK
                     K"
     gene            3212..3463
                     /locus_tag="PTC28_000620"
     CDS             3212..3463
                     /locus_tag="PTC28_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015978017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715937.1"
                     /translation="MTDKPQAKSYLKQYFGTKRYLYQDGRKVAHMHIVNGLYLLHGHF
                     KTKFTRLKLEFDNKQEFYDYLKKHELHFEESKQLSFFEV"
     gene            3467..3679
                     /locus_tag="PTC28_000621"
     CDS             3467..3679
                     /locus_tag="PTC28_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715938.1"
                     /translation="MILSNSVRQRYRTDTAGKTPTELQQELRKRGVKGFVVNVNHNRV
                     TMLVDRRDVKRNKECMRCLTSTETRK"
     gene            3825..4223
                     /locus_tag="PTC28_000622"
     CDS             3825..4223
                     /locus_tag="PTC28_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715939.1"
                     /translation="MKIKLTKEFKLLELIEYIKKNEIADKVFFDNKGKGKVVVGDDRH
                     LYMTDLNLTDTFTVEVEKVITERTVIPLLVETYLSLKGEPSCYSYRNKSINYILENNK
                     YYNNTPPKHIYNLNDDMTMTLIWKDGEMVE"
     gene            4223..4564
                     /locus_tag="PTC28_000623"
     CDS             4223..4564
                     /locus_tag="PTC28_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715940.1"
                     /translation="MEHDSKEYYENQSEYWHNELIKCSKERDDLKRKLDDVVDLFNAH
                     LHHKKAWSDNPYYDRVQQRLNKILDGYPVETTRLRHLYSTEIEQALKNKDLSECLFLL
                     EKIKMDLEEDE"
     gene            4565..4720
                     /locus_tag="PTC28_000624"
     CDS             4565..4720
                     /locus_tag="PTC28_000624"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715941.1"
                     /translation="MTNEELFDVFQEAMRELEHSIRQIDSEADRYIINKAIELIDSVA
                     WKYEEDE"
     gene            4864..5400
                     /locus_tag="PTC28_000625"
     CDS             4864..5400
                     /locus_tag="PTC28_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HDK5715942.1"
                     /translation="MTNTLTVDQLQELLKIQKEFDDRIPTLNLQDSKIAYVVEFFEWF
                     NTLETFKNWKKKPGKPLDVQLDELADLLAFGLSIANQIGATAEEMKEVVEIIYEHEDF
                     DGKFNFKDAQFTKAAIAGIPEVVFEEIYDDKELAVLVIDIARDIYTIDELIAAYKKKM
                     ERNHARQDGTADKEKGYV"
     gene            5437..5625
                     /locus_tag="PTC28_000626"
     CDS             5437..5625
                     /locus_tag="PTC28_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1381 domain-containing protein"
                     /protein_id="HDK5715943.1"
                     /translation="MTQYLITTFTDSTGQTFTEATKARENQTFTVVLAESKEEAIKKY
                     ESPKVKQQVIACNMPDWA"
     gene            5641..5922
                     /locus_tag="PTC28_000627"
     CDS             5641..5922
                     /locus_tag="PTC28_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015978014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715944.1"
                     /translation="MRLAELLTIVFVVLKLTGVIDWSWWLVLLPEIIAILIYTVLFII
                     TVVYARMQNKIFMSKYERAAKRTRNKHEEYLKRRQKWFENHKLDRGEKK"
     gene            5919..6062
                     /locus_tag="PTC28_000628"
     CDS             5919..6062
                     /locus_tag="PTC28_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715945.1"
                     /translation="MKYIITTAVILYIVYDYYIRRNANDEVDTFNEYDHIDLNDIRAE
                     VSG"
     gene            6062..6205
                     /locus_tag="PTC28_000629"
     CDS             6062..6205
                     /locus_tag="PTC28_000629"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715946.1"
                     /translation="MVWFVIMLIFVSLLLVGSMIENANLKGDLKAKGYEVELLRDRIK
                     ERE"
     gene            6206..6631
                     /locus_tag="PTC28_000630"
     CDS             6206..6631
                     /locus_tag="PTC28_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015978140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDK5715947.1"
                     /translation="MIELIEMYRTNKLEIESLKLRKDICNDEIENWGAVSVNDKARLG
                     KKHDFLSRIKQTDNVVDEINVINERLQTLKTRQKKILDVIDKFEGLEHKILKLRFIEG
                     YKLADIAESLGYSEQYIKNKHSELMKRIEFKTSHKSKVL"
     gene            6919..7362
                     /locus_tag="PTC28_000631"
     CDS             6919..7362
                     /locus_tag="PTC28_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HDK5715948.1"
                     /translation="MKLSIKQQRFADEYIKSGNATQAYIKAGYSKNKANTNATKLLQN
                     TTIKQYIKERIEQAQVESLMSITEALALSASIARGEPQTAYTKRYDHLSGEVDKEVTY
                     TITPNVEERQRSIDHILKVHGAYIDKKEITQKNIEINIGDYDDES"
     gene            7349..8623
                     /locus_tag="PTC28_000632"
     CDS             7349..8623
                     /locus_tag="PTC28_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006190208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBSX family phage terminase large subunit"
                     /protein_id="HDK5715949.1"
                     /translation="MTKVSLNFKQPSKVFNKNIFEILFNYDYFTEVHYGGGSSGKSHG
                     VIQKVVLKALKDWEYPRRILWLRKVQSTIKDSLFEDVKECLINYGIWDMCLWNKTDNK
                     VELPNGAVFLFKGLDNPEKIKSIKGVSDIVMEEASEFTLNDYTQLTLRLRERKHKLKQ
                     IFLMFNPVSKLNWVYKYFFEHGKPMKGVLIRQSSYKDNKFLDDMTRENLEMLATRNPA
                     YYKIYALGEFATLDKLVFPKYEKRIISDKEVGHLPSYFGLDFGYVNDPSAFIHVKIDS
                     DNKKLYVMSEYVKKGMLNNEIAQVINDLGYSKEKITADSAEQKSIMEIKANGIDRIVP
                     AMKGKDSVMAGIQFISQFDIVIDERCYKTIEEFDNYTWKKDKNTDEYYNEPVDTYNHC
                     IDALRYAVEALTIQKKHQKKDKNTLRKIKSLF"
     gene            8635..10080
                     /locus_tag="PTC28_000633"
     CDS             8635..10080
                     /locus_tag="PTC28_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000219548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDK5715950.1"
                     /translation="MTVYTINNINTKFSPLANDDFVVSDLVELLKEENLRNFISRHQV
                     EQVPRLEMLEAYYLNRNTDILAGERRLQKYGDKADHRAVHNYAKYVSRFIVGYLTGNP
                     ITITHQDNQTNDKIIELNDLNDADEVNSDLALNLSIYGRAYEIVYRDFEDKDTFKVLD
                     PKSTFVVYDQTLDKKVVAGVRYFEKQDKDKVPVQHVEVYTTDKIYYIEIKGGTYHRVE
                     EVEHYYNDVPIIEYLNDQFKQGDFENVITLIDLYDSAQSDTANYMTDLNDAMLAIIGN
                     VDLDSEDAKAFRDANMIHLEPGTNANGSEGKAEVKYVYKQYDVAGVEAYKKRLQNDIH
                     KYTNTPDLNDEQFSGVQSGEAMKYKLFGLEQVRAIKERLFKKGLMKRYKLLLNNVNLT
                     GLKQHNYADLTITFTPNLPKSMMESINAFNALSGGVSESTRLSLLDFIDNPKEELDKM
                     HEEEAQREKQADKRGYGEAFENHANVDDSNG"
     gene            10073..11422
                     /locus_tag="PTC28_000634"
     CDS             10073..11422
                     /locus_tag="PTC28_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
                     /protein_id="HDK5715951.1"
                     /translation="MADSLDYWLERAQNTIDSELVEDAKAAAELQRIVTLMYADIAKE
                     LLAFYAKYATAEGLTIAEAKKIVDEFDVVAFHNKARALVKNKDFSEEANKQLKKYNTK
                     MYVSREKLLKQNLDLLVTEASIKVENHIEKSLVKAIDREVERQSGILGTDINVTDKKI
                     KAVVNSNFKGVTWSERLWDDMDLVRKEVERVATNVVNRGRHPNEYVADFKKKTGATTH
                     DAKRLLVTESARVQTEAQKLSYLETLGEDGEYEFVAKRDEKTSKVCRHHDKKVYKVKD
                     MTPGVNAPPMHPHCRSTTIPHIGNWRDDFFKKRKGKYKLDEEETTQLLAKKEMTDAID
                     SGKIKVELNPNKQNRHQLGHQLYEDYKKKNLQKGKAMPSYTILENKQLDSLLSQKIGK
                     GRLLTKRNGEWKNKEVIDFGEIIGNDYMDGEWKETKFGTVHYSKTGTHIIPNGKEDK"
     gene            11422..11616
                     /locus_tag="PTC28_000635"
     CDS             11422..11616
                     /locus_tag="PTC28_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LSM domain protein"
                     /protein_id="HDK5715952.1"
                     /translation="MKLWTYVGKKVSIEFIDGQRLTGKVTNYDDEIDNESGEDSIHFE
                     YGNSLYDIDESEIKSIEILD"
     gene            11799..12410
                     /locus_tag="PTC28_000636"
     CDS             11799..12410
                     /locus_tag="PTC28_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019236221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4355 domain-containing protein"
                     /protein_id="HDK5715953.1"
                     /translation="MNTQDKLKFNLQFFSEDLNKDSLNDDPEKPKDTDLDSDEETKTY
                     TEEEFNKRLHDELSRRMKQKEKEKQEAVEEAAKLAKMNKDQKAEYEREKLEAELKQLR
                     AEKAMNEMRSEARVMFKDKDIDASDELLDIVVSDSAETTKNNVDNFTKILDEMVRKKV
                     QETLRQNSPKSFSKSGLSRDEILAIKDDSERQSAIAQNMHLFN"
     gene            12428..13339
                     /locus_tag="PTC28_000637"
     CDS             12428..13339
                     /locus_tag="PTC28_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001271960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsid protein"
                     /protein_id="HDK5715954.1"
                     /translation="MPAENNLINVEALGKAKSIDFANKLGVGLTKLFEALAIQNKIPM
                     NVGSALKQYRFKVEDSEKPNGDVAEGDVIPLTKVTREQVDITELQFAKYRKSTSAEAI
                     QAHGYDLAINQTDNEMIKYVQKKFRAKFFGTLKSAIENEKRTNKAKLSAKNLQGALSK
                     GRANLSVLLDDEITPIAFVNPNDTAEYLANGFINSTGAQFGVNLLTPYVGVKIVEFAD
                     VPQGEVWMTVAENLNVAYANPRGELARAFAFSTDATGFVGVLHDIQPQRLTSDTIYAS
                     AISMFPENIDAVIKVSIKADDAVNLPS"
     gene            13429..13878
                     /locus_tag="PTC28_000638"
     CDS             13429..13878
                     /locus_tag="PTC28_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000087695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig domain-containing protein"
                     /protein_id="HDK5715955.1"
                     /translation="MTRKLKLYSNDEVVASAEGDGRVNVSLSGLEPATTYPKGKYKVA
                     FEENGKESEKVDVPEFTTNSILITSISFVPESKTISNGTNEQLEPNISPSTATDKSLS
                     YVSNAPETVSVDENTGVINALQTGEAVITATTKDGSNKTAQITITVE"
     gene            13890..14222
                     /locus_tag="PTC28_000639"
     CDS             13890..14222
                     /locus_tag="PTC28_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head-tail connector protein"
                     /protein_id="HDK5715956.1"
                     /translation="MSYLDDVKSRIGLNDNEQDKQLNSIINNVAAELLSRLPVDTISI
                     PDRLRFIVVEVSTKRYNRIGAEGMSTDSQDGRSNTFERNDFEEYQSIIDALYPKLDSS
                     ERGSVNFY"
     gene            14523..14873
                     /locus_tag="PTC28_000640"
     CDS             14523..14873
                     /locus_tag="PTC28_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016064896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HDK5715957.1"
                     /translation="MEARGLKELIAHMKSMRDNIDDDVDKILKNNANEGVGIAVSNAK
                     KVMNKGYWTGNLARSIEVKKMGDLHYRVISTAHYSGFLEFGTRYMEPAPFMFPTYQTL
                     KKSTLNDLKRLLNG"
     gene            14883..15278
                     /locus_tag="PTC28_000641"
     CDS             14883..15278
                     /locus_tag="PTC28_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000921394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715958.1"
                     /translation="MLESTPQQALYDYIFTQLLGYGIDVIDFKELNSQLTYPFFVLRD
                     VEVSKSKYTMENVGGELTVTIDLWNYADDRGQHDSIVYAIESMLTVIESVESYQLILD
                     GMIIKTLNDIENSDRQLLHTVIIATYKLF"
     gene            15296..15949
                     /locus_tag="PTC28_000642"
     CDS             15296..15949
                     /locus_tag="PTC28_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail protein, TP901-1 family"
                     /protein_id="HDK5715959.1"
                     /translation="MAKKDSKDRLFLFRIAGQKVDAKKMMFLTEYSVSLEADSENEDT
                     MDDSYSTGGSLENTISATAKMDYRDSFADEVEDAVRDGIIYEAWEIESKVEGKGVNAG
                     KFKAKYYQGKFKKFESKGEVKGVDEYETEFNVFGKYQRGFATIPETIKTKLELAGYRF
                     HNTTKDDPATEVTQNIPQPTVDTEDMEDSRDDMVSGVAKPSNVQAVPNAKSVSISAE"
     gene            16007..16390
                     /locus_tag="PTC28_000643"
     CDS             16007..16390
                     /locus_tag="PTC28_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015977907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly chaperone"
                     /protein_id="HDK5715960.1"
                     /translation="MITVKNGKHGLELKFGLGQLTAIDKSLGLNVEKINLGEGLSMLI
                     PKLEKGNIIALAKVVNAATSGQKGRPKTDEELEEVLINARDEYGSFKKFGQAIIDFLG
                     ERPLTQDLVQDHLKDEEAETVTEEQ"
     gene            16417..16767
                     /locus_tag="PTC28_000644"
     CDS             16417..16767
                     /locus_tag="PTC28_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001281461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715961.1"
                     /translation="MSDLKMTSLKEINEMTLTEFNYRMYALRFDVLKEEYERYKLAFA
                     IRDAAATKNEGTEKEPKEVYRFKSPNDILDYEVNYNRLLDGKEIVFTDELEEVEPENN
                     NFLKAIAEINNNIK"
     gene            16784..19891
                     /locus_tag="PTC28_000645"
     CDS             16784..19891
                     /locus_tag="PTC28_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000064033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDK5715962.1"
                     /translation="MSNESYTVSSDLKADTARFKKAIDSAIRTLRQYEKITSRIKDVE
                     LDADDKLIKEKVKQAELALKRIDGKKSNATIDASTKIAETKLKNYEKALQFLDNKLVK
                     TAIDLQNRLFVSKFNKTKAEINKLDGKTVNTELEVKDSVAVNKIRRFKALLRSIPNRR
                     KVRVDADGNSFLRALDYLNKQSDVFVGRMDRIAKSIRTFGTIGANMIQGTLLSSFSAL
                     IPIIASLVPAIMAVGNALAVVGGGALGLAGAFGIATAGAVGFGAMAISAIKMLEDGTL
                     QASAATYAYKQSLKGVTNEWQKIISLNADSIFGALSSALNGVRTTLKNLTPFLKGVSE
                     AVNSTAQNFEKWVSSSSTAKKAFETMNTSGVKVFSSLLSAAGRFGDGLVNILTQFAPL
                     FEFVANGLNNMGASFQEWANKVSTQQGIQKFIDYVKVNLPIIGKIFGDTFLGIFNLFK
                     AFGSNSQTIFEALAQMASKFRAWSEQVAQSDGFKKFIDYVQQNGPTIMSLIGNIIMVL
                     VNFGTAMAPIASVVLNVVTAITGFVAKLFETHPIVAQIIGLAITFGGVLMTWIPIIVG
                     IVSYLAPLIARFGFLKTSMLLLSRVFTLLSGPIGIVSKLFPILGAAIGFLTSPIGLVI
                     GAIIALIAIFVILWNKNEAFRNFIINLWNSIKDFFINLWTTLATIASVLWQLLLTTIV
                     NIVISIQTWLTTTWQNILTFLSTLWNTLIVIATTIWNLLVTVIVTVITTILTVQQTIW
                     NSILSFLQTIWNTVVSVATTVWNTLVTVITTVLNAINSFVTTIWNAIYSFFASILSRI
                     SSTVSQKFSEVYRWISTKIQQAYSILSSILSNMWSVVSSKFSQIVSTVISKMVEFYNA
                     IKQKVQDSLNAVVNFVGEFMDAGRNLIMGLVNGVKNAAGALIDAVTGAVSGAIDKAKS
                     LLGIKSPSRVFKQIGVYTMQGLGIGVDQEGQNAVGSVVDVARQLTKAFNPVLSLPSIS
                     DATSGLNGLSGLSANLTTQIQHTHSFETSPRMKTVRIEMRLDNDAIYGIVNDKQAEKH
                     SIFEM"
     gene            19904..20836
                     /locus_tag="PTC28_000646"
     CDS             19904..20836
                     /locus_tag="PTC28_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail family protein"
                     /protein_id="HDK5715963.1"
                     /translation="MDIKITKLDGTSYHLEDYKMIVKDVIVESIEMKDDYQDYEGMHG
                     RHLVSSLYHSRKIHVPVFFVADDNLDYAIQRNLLYELVQDEKPFYIQELRRHDKVNYK
                     FKNTLATDYQQVDDHGIPIFDDDNLQVNAKRYLVKLSNVLIPEQKNNIGNVSLEFVTT
                     HLPFAESVETSLDLHKQLINGFWASDDDIDFDDTAKQTYIFNNVKAGQVYYHGTVPNK
                     QFNMYKKVRITIGKATNDFQWSLSGSDLMRVSGVEFKSGDVLEYDGLRITKNGRSVVN
                     ESNIALPVFLPGFNEFRFNQNVKKAEFDMRFYSK"
     gene            20849..22246
                     /locus_tag="PTC28_000647"
     CDS             20849..22246
                     /locus_tag="PTC28_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715964.1"
                     /translation="MIKLRNILGEAYFLQVPTELTERISGESQLTFSFSENESNREIV
                     NTISKKWQVTNVGGQNDDKIYTVALVSKESNSLTTRVTVHCKEKQIDDLKAKRIYDNL
                     TGSFTAERFFSTVFKGTGYKYKLDAKVKALKFENAGDGDTVLETFQKGLERYNLEFKY
                     VPKTKTFILTKKVFQKADYFIENGTNALNFKLEEDSSEFYTYIRGYGNFDDNVKFQEA
                     SMQLIYKHPLADDIGIYEAPAIIDGRIKDEEFLRNKMINTVDNSLKTSLTLDFITLQE
                     EYAEAVPVVGDLVPVKDDIIDVFDFVRIVEVQTKRDINNKIFEQNATLGDYKKRDRYN
                     SKVSNSVSLTNSIGGSSTDIREAKDKIKGFVSAANNVLDMGNALRADSKGIKSVNKLL
                     NTVFTPDKGIAISNDGGKTFVTALDGDGINVDVIPVATTTKNGLMSKDDKIKLDNLNG
                     VGSSRLGSIFYKEVK"
     gene            22250..22942
                     /locus_tag="PTC28_000648"
     CDS             22250..22942
                     /locus_tag="PTC28_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002494385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715965.1"
                     /translation="MAEITKARTLTYDGEEVYARSHIDVVDGLDKSKLLTDEQKRKLE
                     NFNADAIDVATPSKNGLMSAQDKTKLDSLKQFDPDTLTNATTQKAGLMSAEDKRRLDE
                     LKTNSNAYDKGLSNATASSSVITANINKWPNATQTVNLSKKVSECQNGIVLVWRSDTE
                     DDNYHYQYVPKYHVSAHSTTKIVHLIPTNSANEFCTKTVIVKDNVVTGTNDNHNRTTK
                     ANKVRLHEILEF"
     gene            22954..23997
                     /locus_tag="PTC28_000649"
     CDS             22954..23997
                     /locus_tag="PTC28_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HDK5715966.1"
                     /translation="MKLKLSNVFRDFKKDVESNFKEIDKLLTELLDIKSKTSNKYLDS
                     LIDTLFTKRYDQLQKEIRAIVLPEMSPLAITEDYEKSLSDLKGERHTSLKSRLDADLN
                     QIKSQSQKTANDDRFIVTENGTIFADFVKKSKTIKSVKKIGIIGDSVAKGSRASKNFG
                     KYLSEKLVATVQNEAVSGATMSTVKANSIYEQASKIRNKDLVIIQGTDDDWLYNGSSG
                     VQIGTSKTNEKTFYGAFCKTVELIKSNNPKAKILVMTATRQLPVNGTTIRRKDTDKNS
                     LGLDLEAYVNAQVLACSELNVPVYDAYHTDLLDPYNPAFRVKNMVDGLHPNELGHEVI
                     THELLKNYYYFYG"
     gene            24014..25285
                     /locus_tag="PTC28_000650"
     CDS             24014..25285
                     /locus_tag="PTC28_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000013196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BppU family phage baseplate upper protein"
                     /protein_id="HDK5715967.1"
                     /translation="MANQDLFYDITKQGTSQEKQQYLVTRVGDGGLKTVTITVWSNGT
                     PYNLHGLTPVFEGVKPDGEKIIDTRGAIVLDPVNGVFRYTFPHQASTAEGEYRQAFFK
                     LKRGEQTDSTLEVKINVLKNMVEFGINSESYFTEYQQKIAELEGKINTYLEELKTKAA
                     GTEAQVEANATLAKALKQQLDLIQSIANERELLTKGEFNEALNTVNNNVDAISSKIDT
                     LKRETTEELERIKDEVTGVKTGVLDDVANITKSGVYYFNSTTQNVPTRNSNNANGYIE
                     AVMKDANNGMLTMLGSGYAIEKYNGKLHGRWVTSVPVKLWSGKLTKGQTATLNGNCHD
                     FGKLIIEVGYTTNRHAVEWVNIPNNGSTIYMNHIGMQSSGDGYKNGHLDEVVIQIKDD
                     THIVLQKTLKATGDAQAVDSDAYISAIYGIY"
     gene            25318..25692
                     /locus_tag="PTC28_000651"
     CDS             25318..25692
                     /locus_tag="PTC28_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000340977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715968.1"
                     /translation="MDEIKKIKQEIADLTERVDSIEQTANEAASHVVSLRKEYRNGHQ
                     ELQESHKELKDKQEKVVNENFEQTKILNRIEERYQTQVEVAQNNEGKTLALNKWLVGA
                     IWALVTIVMIVVITASINALIP"
     gene            25816..27705
                     /locus_tag="PTC28_000652"
     CDS             25816..27705
                     /locus_tag="PTC28_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HDK5715969.1"
                     /translation="MALPKTGKPTAKQVVDWAINLIGSGVDVDGYYGRQCWDLPNYIF
                     NRYWGFKTPGNARDMAWYRYPAGFKIYKNTTNFVPKPGDMAIWTGGNYNWNTWGHTGI
                     VVGPSTKDYFYSVDQNWNNANSYVGSPAAKIKHSYFGVTHFVRPAYKSEPKLTPIPPE
                     NKPIPKDPEPTKKPESNKPIYKVVTKILFTTARIELVKANRFVHYITKSDNHNNKPNK
                     IVIKNANTALSTNDIYKYREDLNEDEIPHFFVDRLNVWACRPIEESVQGYNNAIVLSI
                     TEARTAVSDNFKMNEIECLSLAKLLLEANGKKMNTSSIVIDKSSWRTFKLHTGKDSLK
                     SSGFTSKDYQKAVNELIKLFNDKDKLLNNKPKDVVEKIRIRTVVKENTKFVPSELKPS
                     NNIKDKQDSKIDRIISNYSLKQALDIQFRLNPKPQTSNGAAWYTASLNQAREAMDTNK
                     IFNNNVQVYQFLKLNQYQGISVDKLNKLLVGKGTLQNQGQAFADGCKKYGVNEIYLIA
                     HAFLESANGTSFFASGRTGVYNYFGIGAFDNNPNNAMEFARSHGWTSPAKAIIGGAEF
                     VGKGYFDVGQNTLYRMRWNPKKPGTHQYATDISWAKVQAKMISAMYKEIGLKGEYFIY
                     DQYKK"
     gene            27725..27979
                     /locus_tag="PTC28_000653"
     CDS             27725..27979
                     /locus_tag="PTC28_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin"
                     /protein_id="HDK5715970.1"
                     /translation="MINWKIRIKQKTFWVAILSAIFLFAQSIAKVFGYDIQVYTEQLT
                     DTLNSVLGILVLMGVIQDPTTQGVSDSHQALNYEEPRQKY"
     gene            27992..28747
                     /locus_tag="PTC28_000654"
     CDS             27992..28747
                     /locus_tag="PTC28_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HDK5715971.1"
                     /translation="MKTYSEARSRLRWYVGRYIDFDGYWAYQCMDLAVDYIYWLLDIR
                     MWGNAKDAINNDFKNMATIYENTPSFVPQVGDVAVFRNGIYKQYGHIGIVYNSGNTNQ
                     FLILEQNFDGNANTPASLRWDNYYGCTHFIRPHYKSENTTSKIANKISPPSHKAAGNS
                     ASKIISGSRAPYNLKWSKGAYFNAKVDGLGATSATRYGDSRANYRFDVGQAEYVPGTL
                     IYVFEIINGWCRIYWNNHNEWIWHERLIVKEVF"
BASE COUNT        10543 a         4406 c         5974 g         7897 t
ORIGIN      
        1 acgcgaaaat caatacccct attgataatt ctgtcaatac ccctattgac gcaaatgtca
       61 aagagaataa tacaagtatt aatattacaa gattaaataa tacaagtagt aatagtaata
      121 gcgcaactga tgttacgcta gcgcattttg aagagtggtg gacgctttat gataagaagt
      181 tggatagaaa aaaagcgttt agcttattta aaagtgcgct taaaaagcat gggttcgaga
      241 ctatcatgaa tggcactaga gaatacctaa aaaccatcac taataagcaa tatcaaaaat
      301 accctaaaac atttttaagt caagaaagtt atttgaatga ctttacgata gaaaaacaag
      361 aaagtggtat ggatcaactc gaaagaatga agtatgacga aagctattgg gattgaggtg
      421 attagatgcg aagaatgctt agcaatatat ctagtaagag cttagggaaa tatcaacctg
      481 tcgaatctga atatgactta acgtgtgaaa aatgcggtcg taaatatgat tggtttaaat
      541 ttgctaatgg ttacgagtat aaagacggtt gcgaatgtga aatacagaaa caagcatatg
      601 aagaacgcaa acgaaatgaa caaagaaaat tgaattatat ttttaatcaa tctaacgtca
      661 atccgtctct atctacagct actgtgaata attacaaacc acaaaatgag aatcaagtac
      721 aagctaaaca gacagcgata gaatacgtta aaacattctc gatagataaa cctaagtcat
      781 taatattaca ggggtcatat ggtactggaa aaagccatct agcatatgca atagctaagg
      841 cggttaagaa acaaggttat acagccgcat ttatgcatat accaatgtta atggatcgca
      901 tcaaagcgac ctacaacaaa aatgcaactg aaacaactga cgagcttgta agtcttttaa
      961 gtagtattga tttgctcgta ttggacgata tgggcgtaga gaacacagaa catacgctta
     1021 ataagttatt tagcattgtg gataatcgtg ttggtaagaa caacatattt acaaccaatt
     1081 ttagtaacaa agaattaaat caaaatacga actggcagcg tatcaattca cggatgaaac
     1141 ataatgctag aacagtaaaa gtaatcggcg atgattacag ggagcgtgac gcatggtaat
     1201 cacatcaatt acaaaagagt ttttgaaaga aaatcttgag tgttcagatg tgtatgctca
     1261 gaaaatgctt gagtgggcac agggcgacga taaaaagttg tatgacctat ttattcaaaa
     1321 gagagttgaa cgcaacacac ggcaagatat gacgatatta gaggtggatt aagtgacgga
     1381 aacaagaata gaaatctttt acaaagatga gaaatatttt gataagccta tggggtcacc
     1441 tagaccccgc tttagaagag tgaagcagtt tgtgcagaca tatatgccta cgcattatac
     1501 aaagcacaag aatttcattg ctgatcaaat gccggattta aaaagtgaaa gagatattaa
     1561 gttgacagtc gggttttact ttccaccttt aaaaagttgg tcgaagaaaa agttaactgc
     1621 aatgttaaca agatacaaaa acacaaaacc tgatttagat aacttgttaa agacagtgct
     1681 tgacgctggt aatggcaagc tatggaatga tgataatcaa attgttgaaa tcagaacatt
     1741 caaaaaatgg agtgaaacag cacggacggt gctgattatc gaggagctga acgacgatga
     1801 ataagatgta taacttatac aacagcaaca aagaaccagt tgtagtagtt agtcggaata
     1861 ttgacggaca atatcacatc aaaggattag acaacacaca actagcgcac atcaatcgta
     1921 ctactgacga tatagatggc ttcaaaagta cattcaatct tttgagcttt gaagaattag
     1981 ggcagttaga tttgacggaa ttactggatt tttaggagtg gaataatggc acaaaaatta
     2041 gagattttta caaaagagca agaagaaaaa atgaagcaaa acggcatacc tagagcgata
     2101 gcaagaagtc gtgtgagaag aatggggtgg agtcctgaag aagctgtcac tacacctatc
     2161 cgagaaaagc ttgtgagtta tacggatttc ccaaaaccac ctactcctcc gaaagtggct
     2221 tatatgcgct ttatggatag tcgtaaagac aagtcgcatt tagttaagta cccgcagtca
     2281 gtagaaccta gcgatttcta taaatatttg aaaagacagg tgttgtggtc atgaagatta
     2341 gaagtgtgga cggaagaatc atactaactg atgagcaagt gcaacaaatg cataaaaatc
     2401 agttaaagcg tggccatgta tataacagag taattaattt agggtggaca gtagataaag
     2461 ctgtcagtac gccagtaagg agcggaaaat gaataatgaa tgcgaatact gtcaaccgtc
     2521 acataaaaga aaatttatca agttaagatt tttcaaaggg tttaaaacgg ataactattt
     2581 aaattattca ttgcgaattg gaaaaagttt taaatgggca aaatttaaga aacataaatt
     2641 gatgttattg gatcacggtg aagtgtgtgc gcatatagat atcaattatt gcccaatatg
     2701 tggacggaaa ttaaaaggag acgcaaataa tggaaattaa agacttgaaa attggtgata
     2761 aagtgagtgt cgaagttggt tcacaacaat tcaaagatac agatgatgag aagtgggttt
     2821 acgaaactat tttcggaaca gctgaagtga caaaagtaaa tgaaacgtat gaatatgcga
     2881 atgttatttt tgaaaatgga acttatggtg aaatcaacgc agatgtggag tggtatccga
     2941 ttccgagtaa tacaaaaatt gcaacacatg aaacatcaga gataaataaa cctcatcact
     3001 atatgtttga agatggtact gaggctatca agattatcaa tatgattgtg aaaagatata
     3061 agcagtcaat tgtcgcagca caaatctata acgcgatcaa atacatcatt agagcgcctt
     3121 ttaaaaatgg ggttgaagat ttaaaaaagg cgaaagaaag tataaatttc gctatcaaat
     3181 tttgggacga caaagaaatg gagtataaaa aatgacagac aagccacaag caaaatctta
     3241 cttaaaacaa tactttggta caaaacgtta tttatatcaa gacgggcgta aagtagcgca
     3301 catgcacatt gtaaatggat tgtatttgct gcatggccat ttcaaaacta aattcacaag
     3361 attgaaatta gagtttgata ataagcaaga attttatgac tatcttaaaa aacatgaatt
     3421 acattttgaa gaatctaaac agttaagttt ttttgaggtg tgataaatga ttttatctaa
     3481 cagtgtaaga caacgctatc gcactgatac agcaggcaag acgccgacag aactacaaca
     3541 agaattacgt aaacgcggcg taaaaggttt tgtcgtaaac gtaaatcaca atcgcgtaac
     3601 gatgttagta gacagacgcg atgtaaaacg aaataaggag tgtatgagat gtctaacgag
     3661 tacagagacg cgcaaatagt aaagcatgca ctgcaatatt atataaaccg tccgaatgct
     3721 agtgaactag atttgaaacg tgaacaaaaa cttttggata aggtaactaa tcaagtgaag
     3781 gatatgcaag aaaattggga tataaaaaac aaggaggaac gaaaatgaaa attaaattaa
     3841 caaaggaatt taaactatta gaactcatcg aatacattaa gaaaaatgag atagcagaca
     3901 aagtgttttt tgataataaa ggtaaaggaa aagtggtggt tggtgatgat agacaccttt
     3961 atatgactga cttaaaccta actgacactt tcaccgtcga agtagaaaaa gtaattacgg
     4021 agagaacggt tattcctttg ttagtagaaa catatttaag tttaaaagga gagccttctt
     4081 gttattccta cagaaacaaa agcataaatt atattttaga gaacaataag tattataaca
     4141 acacgccacc taagcatatc tacaacctta acgacgacat gactatgaca ctaatttgga
     4201 aagacgggga gatggtggag taatggaaca cgattcgaaa gaatactacg aaaatcaaag
     4261 tgaatactgg cataacgaac taatcaagtg ttcaaaagaa cgagacgatc taaaacgcaa
     4321 attagacgat gtagttgatt tgttcaacgc tcacttacat cacaaaaaag cgtggtcgga
     4381 caatccttac tacgacagag tgcaacagag attaaataaa atattggacg gctatccagt
     4441 cgaaactact agattgagac atttgtattc aactgaaatt gaacaagcgt tgaaaaataa
     4501 agatttaagt gagtgtttgt ttttgttgga aaaaatcaaa atggatttag aggaggacga
     4561 gtgaatgact aatgaggaac tatttgatgt gtttcaagaa gcaatgcgtg aattagaaca
     4621 ttctattcgg caaattgata gcgaagccga tagatatatt attaataaag ctattgaatt
     4681 gattgattcg gttgcatgga aatacgagga ggacgagtga aatggagata agcctagcag
     4741 aaactagaga atttttaaac atagtaaaga gagttacacc agtattaaca cgagaagagt
     4801 ttgaatcggt tagcttaatc tatttaggcg cgcttgaaag attagaggag gaggacacag
     4861 acaatgacta acacactaac agtagatcaa ttacaagagt tactaaaaat acaaaaggaa
     4921 ttcgacgata gaattccgac acttaattta caagatagca aaatcgcata tgtggtggaa
     4981 tttttcgagt ggtttaacac attagagacg tttaaaaatt ggaagaagaa gccaggcaaa
     5041 ccgttagatg ttcagctaga tgaattggca gacttgttag cattcggttt gagtattgct
     5101 aatcaaatag gggcaacagc ggaagagatg aaagaagtcg ttgaaataat ttatgaacat
     5161 gaagattttg acggtaaatt taattttaaa gacgcacaat ttactaaagc cgcaattgcc
     5221 ggcattccag aagttgtgtt tgaagaaatt tatgacgaca aagagctagc agttttagta
     5281 atagatatag ctcgtgacat ctacactatc gacgaactca ttgcagcata caaaaagaaa
     5341 atggagcgta atcatgcaag acaagacggt acagcagaca aagaaaaagg atacgtctaa
     5401 aaacatacta caaaaagtaa aagaggtgct gaataaatga ctcaatacct aattactaca
     5461 ttcacagact caacaggtca aacattcaca gaagcaacta aagcgcgtga gaatcaaacg
     5521 tttactgttg tgttagcaga aagtaaagag gaagcgatta agaagtatga gagccctaaa
     5581 gttaaacagc aagttattgc atgcaatatg ccggattggg cttaataagg aggaaacaga
     5641 atgagattag ctgaattatt aacaattgta tttgtcgttt taaaactaac tggggttatt
     5701 gattggtcgt ggtggttagt acttctgcct gagattatag caatcttgat atatactgta
     5761 ttgtttatta tcaccgttgt ctatgcaaga atgcagaaca aaatattcat gagtaaatac
     5821 gaacgcgcag ctaaacgaac acgtaataaa catgaagaat atttaaagcg acgtcaaaaa
     5881 tggtttgaga atcataaatt agatagaggt gaaaagaaat gaaatacatc atcacaacag
     5941 cagtgatttt atatatcgtc tatgactact atattcgacg taatgctaac gatgaggtag
     6001 atacatttaa tgaatatgat catatcgatt taaacgatat acgtgcggag gtgagtgggt
     6061 aatggtgtgg tttgttatta tgcttatctt tgtatcgctc ttactcgttg gtagcatgat
     6121 cgagaacgct aatttgaaag gtgatttgaa agctaaaggg tatgaggttg aattgttgcg
     6181 tgacagaatc aaggagcgtg agtaaatgat tgaattgatt gagatgtata gaactaataa
     6241 attagaaata gaaagtttaa aacttagaaa agacatttgc aacgatgaaa tcgagaattg
     6301 gggagcggtt agcgttaacg ataaggctag attaggtaaa aaacacgact ttttatcacg
     6361 tatcaagcaa acagataatg tggtcgatga aatcaacgtg atcaatgaga ggttgcaaac
     6421 tttaaaaaca agacagaaaa agattcttga tgttattgat aaatttgagg gattagaaca
     6481 caagatactg aaattaaggt ttattgaagg gtataagtta gcagacattg ctgagtctct
     6541 aggatactct gaacagtata ttaaaaacaa acattctgag ctgatgaaaa gaatagagtt
     6601 taaaacgtca cataaaagta aggtacttta acgttattta cgatattgac gaattgcatt
     6661 atattaatag tgtgcagaaa tgtacaacga tgattctttc ggttttgttg attcccatac
     6721 tcctttattg atattaattg aacgttaagg cgcccgagag gcgtcttttg tgtgctgata
     6781 tgagctacat tgaatgtggt tgatatgagt acataactca aataaaatac tcaaaacaaa
     6841 atcattaggc gctgcacgtt tgtgtggtgc ctttttaaat attattaagc aattagcgcg
     6901 agagtggtga tatatgagat gaagttaagc ataaaacaac aaagatttgc agatgaatac
     6961 attaaaagtg gtaacgcaac gcaagcgtat attaaggcgg gttattctaa aaacaaagca
     7021 aataccaacg caacgaagct actacaaaat actacaataa agcagtacat taaagagcgt
     7081 atcgagcagg ctcaagtaga aagcctaatg agtataacgg aagctttagc attatccgca
     7141 tcaattgcgc gaggagaacc acagacagct tatacgaagc gatatgacca tctaagtggt
     7201 gaagtagata aagaagtgac ttacactatc acgcctaatg tagaagagcg acagcggtca
     7261 atagaccata tcttaaaagt acatggtgcg tatattgata aaaaagagat cacacaaaag
     7321 aatatcgaaa taaacattgg tgattacgat gacgaaagtt agtttgaact ttaagcagcc
     7381 gtcaaaagtg ttcaacaaaa atatattcga aatactgttc aattacgatt actttactga
     7441 agtccattat ggtggcggtt caagtggtaa atcacatggc gttattcaaa aagttgtact
     7501 gaaagctttg aaagactggg aatatccaag acgtattttg tggctgagaa aagtgcagtc
     7561 gacaatcaaa gacagtttgt ttgaagatgt gaaagaatgt ttaatcaatt atggtatctg
     7621 ggacatgtgc ctatggaata agacagataa caaagtcgaa cttccaaatg gcgcagtttt
     7681 tttgtttaag ggattagata atccagaaaa aatcaaatcg ataaaaggag tgtcagatat
     7741 agttatggaa gaagcatctg agtttacgtt aaatgattac acacagctga ctttacgttt
     7801 gagagagcgt aaacacaaac tgaaacaaat ctttttaatg ttcaaccctg tgtctaagtt
     7861 gaattgggta tacaaatatt tttttgaaca tggtaaaccg atgaaaggcg tattgattag
     7921 acaatcgagt tacaaagaca ataagttttt agacgatatg acacgtgaaa atttagagat
     7981 gctagcaaca cggaatccgg catattacaa aatatatgcg ttaggcgaat tcgcaacact
     8041 tgataagttg gtgttcccta agtatgaaaa gcgaataatt agcgataaag aagtaggtca
     8101 tttaccttcg tatttcggtt tagactttgg atacgtcaat gatcctagcg cttttattca
     8161 cgtgaaaata gacagcgata acaaaaagct ttatgtcatg tcggaatatg ttaaaaaagg
     8221 gatgctaaat aacgagattg cacaagttat caatgactta ggttactcga aagaaaaaat
     8281 aacggctgat tcggctgaac aaaaaagcat tatggaaatc aaagcaaacg gtatagatag
     8341 aattgtgcct gccatgaaag ggaaagacag cgttatggca ggcattcaat ttattagtca
     8401 atttgatatt gttatcgatg aacgttgtta taagacgatt gaggaatttg ataattatac
     8461 ttggaaaaaa gacaaaaata ccgatgaata ttacaacgaa cccgttgaca cttataatca
     8521 ctgcattgat gcattaagat acgcagttga agcattaacc atacagaaaa agcatcagaa
     8581 aaaagacaaa aatacattac gtaagattaa aagcttattt taaggaggct atcaatgact
     8641 gtatatacaa tcaataacat caatacaaag ttttcacctc ttgcaaacga tgattttgtt
     8701 gtcagcgatt tagtagaatt attaaaagag gaaaacctca gaaacttcat aagcagacat
     8761 caagttgaac aagtaccacg tttagaaatg ctagaagcct attacttgaa tagaaatact
     8821 gacattctag ctggtgaacg tcgattgcaa aaatatgggg acaaggctga ccacagagca
     8881 gtacataatt acgcgaagta cgtgtcacgt tttatcgttg gttatctcac aggaaaccct
     8941 ataacaatta cacatcagga caatcaaacg aacgacaaaa tcattgagct gaacgatttg
     9001 aatgacgctg atgaggttaa cagtgattta gcgttgaatt tgtctattta tggacgcgct
     9061 tatgagattg tatatcgtga ttttgaagat aaagacacat tcaaagtgtt agatcctaaa
     9121 agcacttttg tagtatatga ccaaacgtta gataaaaaag ttgttgcagg cgtaaggtac
     9181 tttgaaaagc aagataagga caaagtacca gttcagcatg tcgaagtata tacgacagat
     9241 aagatttact atattgaaat taaaggtggc acatatcatc gtgtagaaga agtggaacat
     9301 tactacaacg atgtacctat cattgaatat ctcaatgacc aatttaagca aggtgacttt
     9361 gagaatgtta ttactttaat tgatttgtac gatagtgcgc agtctgatac agctaactac
     9421 atgactgatt taaacgatgc tatgcttgct attatcggta acgtagattt agacagtgaa
     9481 gatgctaaag cgtttagaga tgcgaatatg attcatctag agcctggtac aaatgcaaat
     9541 ggctcagaag gcaaggcaga agttaagtat gtttataagc aatatgatgt tgcaggtgtt
     9601 gaagcgtata agaagcgatt gcaaaacgac attcacaagt atacaaatac gcctgatttg
     9661 aatgacgaac agtttagtgg tgttcaatcc ggagaagcta tgaaatacaa gctattcggt
     9721 cttgaacaag tcagagcgat taaagagcga ttgtttaaaa aaggattgat gaagcggtat
     9781 aagttgttat tgaacaatgt taatttgacg ggattaaagc aacataatta cgcagatcta
     9841 acaattacgt ttacgcctaa cttaccaaag tctatgatgg aatctatcaa tgcgtttaac
     9901 gcgcttagtg gtggtgtatc tgaaagcaca cgtttgagtt tgttagactt tatcgataat
     9961 cctaaagaag aactcgataa gatgcacgaa gaagaagcgc aacgagagaa gcaagcggat
    10021 aagcgaggat atggtgaagc ttttgaaaat catgcgaatg tagatgattc taatggctga
    10081 ttcactggat tactggttag agcgtgcgca aaacacgatt gacagcgaat tagtggaaga
    10141 tgcaaaggca gcggctgaat tacaacgtat agtcacattg atgtatgctg atattgcaaa
    10201 ggaactactt gcattttacg ctaaatatgc gaccgctgaa ggacttacga ttgccgaagc
    10261 taagaagata gttgatgaat ttgatgtagt cgctttccat aataaagcca gagcattagt
    10321 taaaaacaag gactttagcg aagaagcaaa taagcaactt aaaaagtaca atactaagat
    10381 gtatgtatcg cgcgaaaagt tgttaaagca gaacctcgat ttattagtaa ccgaagcaag
    10441 tatcaaagta gaaaaccaca tagaaaagtc gttggttaaa gctattgata gagaagtaga
    10501 gcgacaatca ggcattttag gtactgacat caatgttact gacaagaaga ttaaggcagt
    10561 tgttaatagt aacttcaaag gtgttacatg gtcagaacgc ttgtgggacg atatggatct
    10621 agtgcgcaag gaagtcgaac gagttgcaac aaatgttgtt aacagaggtc gacacccgaa
    10681 cgaatacgtt gctgacttca aaaagaaaac aggtgctaca acacatgatg ctaaacgttt
    10741 acttgttact gaatcagcac gtgtgcaaac ggaagcacaa aagctgtcat accttgaaac
    10801 gctcggcgaa gatggtgaat atgaatttgt tgcgaaacgt gatgaaaaga catctaaagt
    10861 gtgtcgtcat catgataaga aagtatacaa agtcaaggac atgacaccag gtgtgaacgc
    10921 tcctcctatg catccacatt gtagaagtac gacgatacca catataggta actggcgtga
    10981 tgatttcttt aagaagcgga agggtaagta taagttagac gaagaggaaa cgacacaact
    11041 tttagctaaa aaagaaatga cggatgccat tgatagtggt aaaataaaag ttgaattaaa
    11101 ccctaataaa cagaatcgac accaattagg tcatcaattg tatgaagatt ataagaaaaa
    11161 gaatttacaa aaaggtaagg caatgcctag ttacactata ttagaaaata aacaattaga
    11221 ttcgttgtta tcacaaaaaa ttgggaaggg tcgcttatta actaagcgta acggagaatg
    11281 gaaaaacaag gaagtcattg attttggtga aatcatcgga aatgactata tggatggcga
    11341 atggaaagaa acgaaatttg gaactgtgca ttattcaaaa acaggaacgc acatcatacc
    11401 aaacggaaag gaagacaaat gatgaagttg tggacttatg tcggcaaaaa ggtatcaata
    11461 gaatttattg acggtcagcg attaacagga aaagttacga actatgatga cgaaatagat
    11521 aacgaaagtg gagaagactc tattcacttt gaatatggca attcactata tgatatcgat
    11581 gaaagcgaaa taaaatcaat tgaaatttta gattaagcac ctgatgaaac gataaatcat
    11641 tcatcaaggt gctattttta tacgcaattt taagctactg tgctgcagtg gcttttttta
    11701 ttgcccaaac catgcttatg gcgttaaaag atgcaagtgt agtccaaacc atgcaatgac
    11761 ataaaacttg caagagtaga ttaaaatgag gtgcttacat gaatactcaa gacaaactaa
    11821 aattcaattt gcagtttttt tcagaggatt taaataaaga tagtcttaat gatgatcctg
    11881 aaaaaccaaa agatactgat ttagattctg atgaagaaac aaaaacatac actgaagaag
    11941 aatttaacaa aagactgcat gatgagttaa gtcgtcgaat gaagcaaaaa gagaaagaaa
    12001 agcaagaagc agttgaagaa gctgctaaat tagcaaaaat gaacaaggat caaaaagcag
    12061 aatatgaacg cgaaaagcta gaagcagaat taaagcaatt gcgtgctgaa aaagctatga
    12121 atgagatgcg ttcagaagcc cgtgtgatgt tcaaagacaa agatatcgac gcaagtgatg
    12181 agttactaga cattgttgtg tctgatagcg ctgaaacgac aaaaaataac gttgacaact
    12241 ttacaaagat tcttgatgaa atggttcgaa agaaagttca agaaacatta agacaaaatt
    12301 cgccgaaatc tttcagtaag agcggattaa gtcgagatga aatccttgcg attaaagacg
    12361 atagcgaacg acaaagtgct atcgcacaaa acatgcactt atttaactaa aaaacggagg
    12421 taattttatg ccagcagaaa acaatttaat caatgtggaa gcattaggaa aggcaaagtc
    12481 tattgatttt gctaataagt taggtgtggg attaaccaaa ttatttgaag ctttagcgat
    12541 tcaaaacaaa atccctatga acgtaggttc agcacttaaa caatatcgat tcaaagtaga
    12601 agattctgaa aaaccaaacg gagatgtagc agaaggtgac gtaattcctt taacaaaagt
    12661 tactcgtgaa caagttgata ttactgaatt acagtttgct aaataccgaa aatcaacgtc
    12721 agccgaagcg attcaagcgc acggttacga cttagcaatc aatcaaactg ataacgaaat
    12781 gattaagtac gttcagaaaa agttccgtgc taaatttttc ggaacgctaa aatcagcaat
    12841 tgaaaatgaa aaacgtacaa acaaagcaaa gttaagcgct aaaaacttac aaggtgcttt
    12901 atctaaaggt cgtgcaaact tgtctgtgtt attagacgac gagattacac ctatcgcttt
    12961 tgttaatcca aatgatactg ctgagtattt agcaaacggc tttattaact caacaggtgc
    13021 gcaattcggt gtgaacctct taacacctta tgtaggcgtt aaaattgtag agtttgcaga
    13081 cgtgccacaa ggcgaagtgt ggatgacagt ggctgaaaac ttaaacgtgg catatgctaa
    13141 tccacgcggt gagttagcac gtgcatttgc tttttcaact gatgcaactg gtttcgttgg
    13201 cgtgttacat gacattcaac cacaacgttt aacatcagac actatttatg catccgctat
    13261 ttcaatgttc cctgaaaaca tcgacgcagt tatcaaagtg tctatcaaag cggacgacgc
    13321 ggtaaattta ccctcgtaaa ccccaaaaaa tcgaaatcac accgaacgca aaatcggtaa
    13381 atatttcggt tgaatagggg atttcaaaat tgagtaggag gtatttaaat gaccagaaaa
    13441 ctaaagttat acagcaatga tgaagttgtt gcatctgcag agggagatgg acgtgttaac
    13501 gtaagtcttt caggcttaga gcctgcaaca acttatccta aaggtaaata caaagttgct
    13561 tttgaggaaa atggtaaaga atcagaaaaa gttgatgtac ctgaatttac tacaaattca
    13621 attctaatca caagcattag ttttgttcct gaaagcaaaa cgattagcaa tggtacaaat
    13681 gaacaattag aacctaatat atcgccatcc acagcaactg ataaatcgtt aagttatgta
    13741 tctaatgcac cagaaaccgt atctgttgat gaaaacacag gagtgattaa tgcattacaa
    13801 actggtgaag cggtaattac agcgacgaca aaagacggta gtaataaaac agcacaaatc
    13861 actattacag ttgaatagtg gtgattaaga tgagttactt agacgacgtt aaaagtcgta
    13921 taggattaaa tgataacgaa caagacaaac aactaaactc tatcattaac aacgttgctg
    13981 ctgaattatt atcgagattg ccggtagaca caattagcat tcctgacagg ttgcgattca
    14041 tagtcgttga agtttcaaca aagcgataca atcgtatcgg tgcggaaggt atgtccacag
    14101 attcgcaaga cgggcgtagc aacacgtttg agcgcaacga ctttgaagag tatcaaagta
    14161 ttatagatgc tttgtatcct aagcttgatt caagtgagcg agggagcgtg aatttctatt
    14221 gaggtattca gaaagggtcg accttatcgt tgaagagcga ggtaaatata atcctttgac
    14281 caaaaagaaa gaagctactt acaaaacata tacaaaaata ccgtgtaatg ttaatagatt
    14341 gtcgagagag cgtactcagc tcgaatttgg cgaaatggct aaagatgtat cggtagtgcg
    14401 tttgcctaaa caattaaaat tcgaaccaac acacgtcttg ttaaaaggca gaaaatacaa
    14461 agtcatggat attcgtgtgt acgatcatag cacttcactt tttataagcg aggtgcttag
    14521 tgatggaagc taggggcttg aaagagttga tagcacatat gaaaagcatg cgtgacaata
    14581 tagatgatga tgttgataag attctgaaaa ataatgctaa cgagggtgtt ggtattgcag
    14641 tatctaatgc gaaaaaagtt atgaataagg gttattggac tggtaatctg gctcgttcga
    14701 tagaagttaa aaagatgggg gacttgcatt atcgtgtaat atcaaccgcg cattatagtg
    14761 gcttcctcga atttggtact cgatatatgg aaccggcacc ctttatgttc ccgacatatc
    14821 aaacgttaaa aaaatcaaca ttaaatgact taaaaagatt gttaaacgga tagaggtgtt
    14881 acatgttaga atctacacca caacaagcat tatatgatta tatttttacg caattattag
    14941 gatatggaat tgacgttata gactttaaag agttgaacag tcaattgaca tatccttttt
    15001 ttgtattgcg agatgtagaa gtaagtaaaa gtaaatacac gatggaaaat gtgggcggtg
    15061 aattaaccgt aaccattgat ttgtggaact acgctgatga tagaggacaa cacgacagca
    15121 ttgtttatgc gattgaatcg atgttgactg ttattgaaag cgtagaaagt tatcaactaa
    15181 tacttgatgg aatgattatt aaaacattaa acgatataga aaatagcgat agacaattgc
    15241 tacatacagt gattatcgct acctacaagt tattttaaca aggaggtcat aatgtatggc
    15301 taaaaaagac agtaaagata gattgttttt atttagaatt gccggtcaaa aagtagacgc
    15361 taaaaagatg atgtttttaa ctgagtatag cgtgtcactt gaagcggatt ctgaaaatga
    15421 agacacgatg gacgattctt actcaactgg tggatcactt gagaacacca tttcggccac
    15481 agctaaaatg gattatcgtg acagttttgc tgatgaagtt gaggatgctg tgcgtgacgg
    15541 tatcatttat gaagcgtggg aaattgaaag caaagtggaa ggtaagggcg taaacgccgg
    15601 taagttcaaa gcgaaatatt atcaaggtaa attcaagaaa tttgaatcta aaggcgaagt
    15661 aaaaggcgtt gatgagtacg aaacagaatt taatgttttc ggtaaatacc aacgtgggtt
    15721 tgcgacaatc cctgaaacga ttaaaacgaa acttgaactc gcaggatatc gattccacaa
    15781 cacaactaaa gacgaccctg caacagaagt tactcaaaac attccacaac ctacagtcga
    15841 tactgaggac atggaagatt caagagatga catggtgtca ggcgtcgcta aaccatcgaa
    15901 tgtgcaagca gtacccaacg caaaatcagt tagtatttca gcagaataat caacgggcta
    15961 aatcgcccgt tttttattaa ttttttaaac tatggaggct atttaaatga ttacagtaaa
    16021 aaatggaaag cacggattag aattgaagtt tggattaggt caattaactg caattgacaa
    16081 atcgttaggc ttgaatgttg aaaaaatcaa tttaggcgaa ggactatcaa tgttaattcc
    16141 taagttagaa aaaggaaata ttatcgcttt agcaaaagtt gtcaacgctg ctacttcagg
    16201 acaaaaagga cgtccaaaaa cagacgaaga gcttgaagaa gtattaatca atgcacgtga
    16261 tgaatatggt tcattcaaaa agtttggtca agctattatt gactttttgg gggagcgacc
    16321 attgacccaa gacctcgtac aggatcactt gaaagacgag gaagcggaga cagtgacgga
    16381 agaacaataa catacagcag aattgtaatc gcgtgcatgt cagatttgaa aatgaccagt
    16441 ttaaaagaaa tcaatgaaat gactttgact gagtttaact atcgcatgta tgcgttacga
    16501 tttgatgttt tgaaagaaga atatgagcgt tacaagttag cgtttgcgat acgtgatgca
    16561 gctgcaacaa agaatgaggg gaccgaaaag gaacccaaag aagtatacag gttcaaaagt
    16621 ccaaatgaca tattggatta tgaggttaat tacaatcgat tacttgatgg taaagagatt
    16681 gtgtttactg atgaacttga agaagtggaa cctgaaaaca ataacttctt aaaagcgata
    16741 gcagaaatta acaataatat taaataatga ggaggtggga taattgtcta atgaatcgta
    16801 tacggtttcg tccgatttga aagctgatac cgcccgattt aaaaaagcta ttgatagcgc
    16861 tattagaacg cttaggcaat atgaaaaaat aacatcaaga attaaagatg tagagcttga
    16921 tgctgatgac aagctaatta aagaaaaagt taaacaagcg gaattagctt taaaaagaat
    16981 tgacggcaaa aaatcaaatg ccacaataga cgcaagtaca aaaatagctg aaactaaact
    17041 aaaaaattat gaaaaagcct tacaattttt agataataaa ttagttaaaa cagctatcga
    17101 tttacaaaat agactttttg tatccaaatt caataaaacg aaagctgaaa tcaacaaatt
    17161 agacggtaaa acagtcaata cagaattaga agttaaagac agtgttgctg ttaataagat
    17221 tagacgattc aaagcgttgc tacgaagcat accgaataga aggaaagttc gagtcgatgc
    17281 agatggcaac agttttttaa gagcattaga ttacctcaac aaacaaagtg atgtttttgt
    17341 tgggcgcatg gatcgtattg ctaaatcaat ccgaacattt ggaactatcg gtgctaatat
    17401 gattcaaggt acattgttgt catcatttag tgcgttaatc cctataatag ctagcttagt
    17461 accggcgatt atggctgtag gtaatgcgtt agctgttgtc ggtggtggcg cgttaggcct
    17521 tgcgggagct tttggtattg ctactgctgg cgccgttggt tttggtgcga tggctatatc
    17581 agcaatcaaa atgcttgaag atggtacgtt gcaagcaagt gctgcaacat atgcatacaa
    17641 acaaagttta aaaggcgtaa caaatgaatg gcaaaaaatc attagtttga atgccgattc
    17701 tatatttggc gctttatcat cagctttgaa cggtgtacga accactttaa aaaacttaac
    17761 tcctttccta aaaggtgtat cagaagcagt taattctacc gcacaaaatt ttgaaaagtg
    17821 ggtatcatct tctagcacag ctaaaaaagc ttttgaaacg atgaacacat caggcgttaa
    17881 agtcttttct agcttattaa gtgctgcagg acgattcggt gatggtcttg ttaacatatt
    17941 aactcaattt gcgccattat ttgagtttgt ggctaatgga ttaaacaata tgggtgcgtc
    18001 ctttcaagag tgggcaaata aagtatcgac gcagcaaggt attcaaaaat ttattgatta
    18061 cgtaaaagtg aatttaccaa ttatcggtaa gattttcggc gatacattct taggtatctt
    18121 caatttgttt aaagctttcg gctcaaattc gcaaactatc tttgaagcgt tagcacaaat
    18181 ggctagtaag ttccgcgctt ggtcagagca agtcgctcag tcagatggat ttaaaaaatt
    18241 tatagactat gtccaacaaa atggcccgac tattatgagt ttaattggta atatcataat
    18301 ggtattagtc aatttcggta cagcgatggc acctattgcg agcgttgtac tgaatgtagt
    18361 cactgcaatt actggttttg ttgcaaagtt attcgagacg catccgatcg ttgctcaaat
    18421 tattggtttg gcaattactt ttggtggtgt cttaatgaca tggattccaa ttatcgttgg
    18481 gattgtttcg tatttagctc ctttaatagc tagatttggc tttttaaaga catcaatgct
    18541 attactgagt agagttttca ctttacttag tggcccaata ggaattgttt ccaaactgtt
    18601 tcctatactt ggcgctgcaa tcgggttttt aacttctcca atcggattag ttatcggtgc
    18661 aattatcgca ttaattgcga ttttcgttat tttgtggaac aaaaacgagg catttagaaa
    18721 tttcatcatc aatttatgga attcaattaa agatttcttt ataaatctgt ggacaacttt
    18781 agcaacgata gcatctgttt tatggcaatt attacttaca acaatcgtga atattgttat
    18841 aagtatacaa acgtggttaa caacaacatg gcaaaatata ctaacgtttt tatcaacttt
    18901 atggaatacg ttaatcgtga ttgcaacaac aatttggaat ttgcttgtga ctgttattgt
    18961 aactgttatc actacgatac taaccgttca acaaacgata tggaattcaa ttttaagttt
    19021 tttacaaacg atatggaaca ccgttgtttc ggtagcaaca actgtttgga acacattagt
    19081 aactgttatc acaactgttt taaatgctat aaattcattt gtaacaacaa tttggaatgc
    19141 tatatacagt ttcttcgctt caattttaag tagaatctca tctactgtaa gtcaaaaatt
    19201 tagtgaagtt tatagatgga tttcaacaaa aattcaacaa gcgtatagca ttttaagctc
    19261 tattttatcg aacatgtggt cggtcgtatc aagtaaattc agtcaaattg tgtctactgt
    19321 aatttcaaaa atggtagaat tttacaatgc cattaaacaa aaagtacagg attcgcttaa
    19381 tgcggtagtc aattttgttg gtgaatttat ggacgccggt aggaatctca taatgggatt
    19441 agttaacgga gtgaaaaatg cagcaggtgc cttaattgac gcggtaactg gcgcagttag
    19501 tggtgctatt gataaagcga aatctttatt aggtatcaaa tcgccttcac gtgtctttaa
    19561 gcagattggt gtgtacacaa tgcaaggttt aggaattggt gttgatcaag agggacaaaa
    19621 tgcagttggt agcgttgtcg acgtcgctag acaattaacg aaagcgttta atccagtttt
    19681 aagtttgcct agcatatctg atgctacaag tggtttaaat ggattatcag gattaagtgc
    19741 aaacctcaca acacaaatcc aacacacaca ttcgtttgaa actagcccta gaatgaaaac
    19801 ggtaagaatt gaaatgagat tagacaatga tgcaatttac ggcattgtta acgataaaca
    19861 ggcagaaaaa cattcaatct ttgaaatgta ggaggtatca taaatggaca ttaaaatcac
    19921 gaaactagat ggtacttcct accatttaga agattataaa atgattgtta aagacgtaat
    19981 tgtagaaagt atagaaatga aagatgatta tcaagattac gaaggcatgc acggcaggca
    20041 tcttgtaagt agtttgtatc attcacgtaa aatacatgta cccgtgttct ttgtggctga
    20101 tgacaatcta gattacgcaa tacaacgtaa tttgctgtat gagctagtac aagatgaaaa
    20161 gccgttttat attcaagaat tgcgtagaca cgacaaagta aactataaat ttaaaaacac
    20221 tttggcaact gattatcaac aagtagatga tcatggtata cctatttttg acgatgataa
    20281 tcttcaagtg aacgctaaaa ggtatctcgt taaactgtct aatgtgttga taccagaaca
    20341 aaagaacaac atcggtaatg tatcactaga atttgttacg acacatttgc cgtttgctga
    20401 atcagttgaa acaagtttag atttgcacaa gcaactaatc aatggctttt gggcgtctga
    20461 tgatgacatc gattttgatg acactgcaaa acaaacgtat atttttaata atgttaaagc
    20521 gggtcaagtt tactatcacg gtacagtccc taacaagcaa tttaacatgt acaaaaaggt
    20581 cagaataaca ataggtaaag cgacaaacga ttttcagtgg tcactttcag gaagtgactt
    20641 aatgcgtgtg agtggcgttg aatttaagtc tggtgatgtt ttagaatatg acggtttaag
    20701 aatcactaaa aacggtcgct cggttgttaa tgaatctaat attgcgttac cggtcttctt
    20761 gcctggcttt aacgaattta gatttaacca aaatgtaaaa aaagccgaat ttgatatgcg
    20821 attttatagt aagtaggtag ataaagagat gattaaatta cgtaatatat taggcgaagc
    20881 atattttctg caagtaccaa cagaactcac agagcgtata agtggtgaaa gtcagttgac
    20941 atttagcttt tcagaaaacg aaagtaacag agaaattgta aatacgattt ctaaaaaatg
    21001 gcaagtcact aatgttggtg gtcaaaatga tgacaaaatc tatacggttg ctttagtttc
    21061 taaagaatca aactcattaa caacaagggt aactgtgcat tgcaaagaaa aacaaattga
    21121 cgatttaaaa gcaaaacgca tatacgacaa tttgactggt agctttaccg ctgaacgttt
    21181 cttttcaact gtttttaaag ggacgggata taaatacaaa ttagatgcta aagttaaagc
    21241 attaaaattt gaaaatgcgg gcgatggtga cactgtactt gagacctttc aaaaaggtct
    21301 agaacgctat aatcttgaat ttaaatatgt tccaaagaca aaaacattta tcttaactaa
    21361 aaaggtcttt caaaaagcag actattttat cgaaaacggt actaacgctt tgaattttaa
    21421 gttagaagaa gattcttctg agttttatac ttacattcgt ggttacggca actttgatga
    21481 taatgtgaaa tttcaagaag catcaatgca acttatctac aaacatccat tagccgatga
    21541 tataggtatt tatgaagcgc ccgcaattat tgatggcaga attaaagatg aagagttttt
    21601 acgtaacaag atgattaata ctgttgataa ctcattaaaa acatctttga cattagactt
    21661 tatcacatta caagaagaat atgctgaagc ggttcctgtc gtgggtgacc tcgtacctgt
    21721 taaagatgat attattgatg tttttgactt tgttagaatc gtagaggtac aaactaaacg
    21781 agacatcaac aataagattt ttgaacaaaa cgccacgctt ggagactata aaaagcgtga
    21841 tagatataat tcaaaagtta gcaatagcgt cagtcttacg aacagcatcg gtggaagttc
    21901 tacagacatt agagaagcta aagacaagat aaaagggttt gtgtcagcag ctaacaatgt
    21961 gcttgatatg ggtaacgcgt taagagctga ttcgaaaggt ataaagtcgg taaataagtt
    22021 gttgaatact gtttttacac ctgacaaagg catagccatc agtaacgacg gtggtaagac
    22081 gtttgtcact gcacttgatg gcgatgggat aaatgttgat gttataccgg ttgcgacgac
    22141 aacaaaaaac ggtttgatgt cgaaagatga caaaataaaa ttagataatt tgaatggtgt
    22201 aggctcgagt agacttgggt ctatttttta taaggaagtg aagtaataaa tggctgaaat
    22261 tactaaggca aggacgttaa catacgatgg cgaagaggtt tatgctagat cgcacattga
    22321 tgttgttgac ggtttagata aatcaaagtt attaactgac gagcaaaaac gaaaactaga
    22381 aaactttaat gcggatgcaa ttgatgttgc aacgccatcg aaaaatggtt tgatgtccgc
    22441 gcaagacaaa actaaactgg acagcttaaa acagttcgac cctgatacac tcacaaatgc
    22501 gactactcaa aaagcgggct taatgtccgc tgaagataag cgtcgccttg atgagttgaa
    22561 aacaaattca aacgcttacg ataaagggtt atcaaatgca actgcatcca gttcagttat
    22621 tacagcaaac atcaacaaat ggccaaacgc aactcaaact gtaaatttaa gtaaaaaagt
    22681 gagcgaatgc caaaatggca ttgtgttggt atggcgttct gacactgaag atgataacta
    22741 ccattatcaa tatgtaccta agtatcacgt gtcggctcat agtacaacaa aaattgtgca
    22801 tctaatccct acaaattccg cgaatgaatt ttgtacaaaa acagtcatag taaaagataa
    22861 tgtcgttact ggtacgaatg acaaccataa taggacaacc aaagcaaaca aagtacgctt
    22921 acatgaaatt ttagaatttt aggaggtttg gaaatgaagt taaagttatc taatgtgttt
    22981 cgtgatttta aaaaagatgt tgaaagtaat tttaaagaaa ttgataagtt actaactgag
    23041 ttactcgaca ttaaaagcaa aacgagtaat aaatatttgg acagtttgat tgatacactt
    23101 tttactaaac gatatgatca actgcaaaaa gaaatcagag caattgtgtt gcctgaaatg
    23161 tcccctcttg caattacaga ggattatgaa aagagtttaa gtgatttaaa aggggagcga
    23221 catacatcac tcaaatcacg attagatgca gatttaaatc aaattaaaag tcaatctcaa
    23281 aagactgcta atgatgatag atttatcgtg actgaaaacg gtacaatctt tgctgatttt
    23341 gttaaaaagt caaagacaat caaaagtgtt aaaaaaattg ggattatcgg cgattctgtt
    23401 gcaaaaggta gtagagctag taaaaatttt ggtaaatacc tgtctgaaaa gttagttgct
    23461 actgtacaga acgaagcggt aagcggtgcg actatgtcaa cagtcaaggc taattccatt
    23521 tatgaacaag cttcaaaaat cagaaataag gatttagtta tcattcaagg tactgatgac
    23581 gattggttat acaacggctc gtcaggtgtt caaattggaa caagtaaaac aaatgaaaaa
    23641 acgttttacg gtgcgttttg taaaacagtt gaattgatta aatctaacaa tcctaaagct
    23701 aagattcttg tgatgactgc aacgcgtcaa ttgccggtta atggcacgac aattagacgt
    23761 aaagacaccg ataagaatag tctagggctt gatttagaag cgtatgtaaa tgcgcaagtg
    23821 cttgcgtgtt cagaacttaa tgtaccggtt tatgatgcat accacacaga cttattagat
    23881 ccatataatc ctgctttcag agttaaaaac atggtcgatg gattgcaccc gaacgagctc
    23941 ggacacgaag taattacaca tgaactgtta aaaaattact actattttta cggataagaa
    24001 agaaggttaa ataatggcaa atcaagactt attttacgat attactaagc aaggtacctc
    24061 acaagaaaag caacaatact tagtcacgcg tgttggtgac ggcggactta aaactgtaac
    24121 aatcacagtg tggtcgaatg gtacacctta caatcttcat ggtcttacac ctgttttcga
    24181 aggcgttaaa ccagatggcg aaaaaattat cgacacacgc ggtgctatcg tattagatcc
    24241 tgtcaatggt gtatttcgat acacattccc acatcaagca agcacagcgg aaggcgaata
    24301 tagacaagcc ttttttaaac tgaaacgtgg agagcaaacg gattcgacgc tagaagttaa
    24361 aattaacgta ctaaaaaata tggttgaatt tggtatcaat tccgaatcat attttacaga
    24421 gtatcagcaa aaaattgctg aattagaggg aaaaatcaat acgtatttag aagaattgaa
    24481 aacaaaagca gcaggtacag aagctcaagt tgaagcgaac gcaactttag caaaagcgtt
    24541 aaaacagcaa ctagatttga ttcaatccat cgcgaatgag cgtgaattac tgacaaaagg
    24601 tgaatttaac gaggcgctca atactgttaa taataatgtt gatgcaatta gttcaaaaat
    24661 cgatacttta aaacgagaaa ctactgaaga attagagcgt attaaagatg aagtgactgg
    24721 agttaaaacg ggtgtgcttg atgatgttgc taatattaca aaatcgggtg tgtactactt
    24781 taacagtaca acgcaaaacg taccgacgcg taattctaac aatgcaaatg gttatattga
    24841 agctgtaatg aaagacgcga acaacggtat gcttacgatg ttaggttcgg gttatgctat
    24901 cgaaaagtac aatggcaagt tacatggtcg ttgggtaact tcggtaccgg ttaagttgtg
    24961 gtcaggtaag ctgactaaag gacaaaccgc aacattgaac ggtaattgtc atgattttgg
    25021 aaaactaatc attgaagtag gctacacaac taatagacat gcagttgaat gggttaacat
    25081 tccaaataac ggcagcacta tttatatgaa tcatatcggt atgcaaagtt ccggcgacgg
    25141 ttataaaaac ggccaccttg atgaagttgt cattcaaatc aaagacgata cacatatcgt
    25201 tttacaaaag actttaaaag caacgggtga tgctcaagcg gtcgattcag acgcatatat
    25261 ttctgctatc tacggcattt attaataatg ctcgaaatct attaaggcgg tgtttgtttg
    25321 gatgagataa agaaaattaa acaagaaatt gctgatttaa ctgaacgtgt tgatagtata
    25381 gagcagacag caaacgaagc ggcctcacat gttgttagtc tgcgaaagga atacaggaat
    25441 ggtcatcaag aattacaaga atcacacaaa gaactcaaag acaaacaaga aaaagttgtt
    25501 aatgaaaact ttgaacaaac taaaattttg aatcgtattg aagagcgcta tcaaacgcaa
    25561 gtcgaagttg ctcaaaacaa cgaaggtaag acgctagctt tgaataagtg gctcgttggt
    25621 gctatttggg cgttggtaac aatcgttatg attgttgtta ttacagcgtc tatcaatgcg
    25681 ttaattcctt aaggaggtgt ttatatgagt tgggctaatt ggctagcatg ttacttatat
    25741 ggacgcaaat gtaaataatt tttgtgagtc ggcactttac gtgtcgactt attttttcga
    25801 aagtgaagtg atgtcatggc actgcctaaa acgggtaaac caacggcaaa acaggtggtt
    25861 gactgggcaa tcaatttaat cggcagtggt gtagatgtgg atggttatta tggtcgtcag
    25921 tgttgggatt taccaaatta catttttaat aggtattggg gttttaagac accaggcaac
    25981 gcaagagata tggcatggta tcgctatcct gcagggttca agatatataa aaacactact
    26041 aactttgtcc ctaagccggg cgatatggca atttggacag gtggtaacta caactggaac
    26101 acatggggtc acacgggtat tgttgtcggc ccatcaacca aagactattt ttatagtgta
    26161 gatcagaact ggaataacgc taactcatac gtcggtagtc ctgcagcaaa gataaagcat
    26221 agttattttg gtgtaactca ttttgttaga cctgcataca aatcggaacc taagcttaca
    26281 cctataccac cagaaaataa gcctataccg aaagaccctg agccgacaaa gaaacccgaa
    26341 tcaaacaaac caatatataa agtagtgaca aaaatcttgt ttactactgc gcgtatagag
    26401 ctagtaaaag caaatcgctt tgtacactac atcaccaaat cagataacca caataataaa
    26461 cctaataaaa ttgttatcaa aaacgcaaac acagcattgt ctacaaatga catttacaag
    26521 tatcgagaag atttaaacga agatgaaatt cctcactttt tcgtcgatag attaaatgtg
    26581 tgggcgtgta gacctattga ggaaagcgta caaggttata acaatgcaat agttttatcc
    26641 attacagaag cgagaactgc agtgagtgat aattttaaga tgaacgaaat cgaatgctta
    26701 tcgttagcta agctattatt agaggctaac ggtaaaaaga tgaacacaag ctctattgtt
    26761 atcgataaaa gctcttggag aacgttcaaa ttgcacactg gtaaagattc tttgaagtct
    26821 agtggtttta cttctaaaga ctatcaaaag gctgtcaacg agctgattaa gctatttaac
    26881 gacaaagata agttattgaa caataaacca aaagacgtcg tagaaaaaat aaggattaga
    26941 acagttgtta aagaaaatac aaaatttgtg cctagtgagt taaaacctag caataacatt
    27001 aaggacaagc aagacagtaa aattgataga atcattagca attacagctt aaaacaagct
    27061 ttagatattc aatttagact taatccgaag ccccaaactt caaatggtgc agcttggtat
    27121 acagctagtt taaatcaagc tagggaagcg atggacacta acaaaatctt taacaacaac
    27181 gtacaagttt atcagttttt gaagctgaat caatatcaag gaatttcagt tgataagtta
    27241 aacaagttgc ttgtaggtaa agggacttta cagaatcaag gtcaagcgtt tgctgatggt
    27301 tgtaaaaagt acggcgttaa tgaaatctat ctgattgcac acgcattttt agaaagtgct
    27361 aatggtacat cattctttgc gagtggtaga accggtgtat ataactattt cggcataggt
    27421 gcttttgaca acaatccaaa taacgcaatg gaattcgcac gcagtcatgg ctggacatca
    27481 cctgctaaag cgattattgg tggtgccgaa tttgttggga aagggtattt cgatgtaggt
    27541 caaaatactt tgtatcgtat gcgttggaat ccaaaaaaac caggcacaca tcagtatgcg
    27601 accgatatta gttgggctaa agttcaggcg aaaatgatta gtgcgatgta caaagagatt
    27661 ggactaaaag gtgaatactt tatttatgat caatacaaaa aataaaatta tggaggaatt
    27721 ttaaatgatt aactggaaaa tcagaataaa gcaaaaaaca ttttgggtgg cgatattatc
    27781 agccatcttt ttatttgcac aaagtatcgc taaagttttt ggatacgaca ttcaagttta
    27841 tacagaacaa ctgacagata cgttaaacag tgttttaggg attctagtct taatgggtgt
    27901 tattcaagac ccgacaacac aaggagttag cgatagtcat caagcactta attatgaaga
    27961 accgagacaa aaatattgag aggtgaaaga catgaaaaca tatagcgaag caagaagtcg
    28021 tttacgatgg tacgtgggaa gatatattga ttttgatggt tactgggcat accagtgcat
    28081 ggacttagct gttgactaca tttactggtt gctcgacatc agaatgtggg gtaatgctaa
    28141 agatgcgatt aacaacgact ttaaaaatat ggctacaatc tatgaaaata caccttcatt
    28201 cgtcccacaa gtaggcgatg tggcggtgtt tagaaacggt atttataagc aatacggtca
    28261 cattggcatc gtatacaaca gtggtaacac aaaccagttc ttaattttag agcaaaattt
    28321 cgatggcaat gcaaacacgc ccgcatcatt gagatgggac aattactatg gatgtacgca
    28381 ttttatccgt cctcattaca aaagcgagaa taccacttct aaaatcgcta ataaaatcag
    28441 tccaccatca cataaagcgg caggcaattc agctagtaag attatcagtg gaagtagagc
    28501 gccgtataac ctcaaatggt caaaaggtgc ttattttaat gcaaaagttg acggtttagg
    28561 tgctacatcg gcaacacggt atggtgatag ccgtgcaaat tatcgttttg acgtcggaca
    28621 agccgaatat gtaccaggta ctttaattta tgtttttgaa atcattaatg gttggtgtcg
    28681 catctattgg aataatcata acgaatggat ctggcatgaa agactgattg ttaaagaagt
    28741 attctgataa caaaagtaaa atatgatata ctatgtatat ccacgacatg attagagggt
    28801 agccgtaatg gttaccctct
//
LOCUS       DANHPA010000018        28206 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.018, whole genome shotgun sequence.
ACCESSION   DANHPA010000018 DANHPA010000000
VERSION     DANHPA010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 28206)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28206)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28206
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.018"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            126..1391
                     /locus_tag="PTC28_000655"
     CDS             126..1391
                     /locus_tag="PTC28_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5715972.1"
                     /translation="MSQKKTNVRWLFAGVFFLIGVIAYMDRSNISYIAVPMMEDLHLT
                     KAQFGFLGSFFSLGYALMQVPSGFLAEKYGPKKMITIALVWWSAFTIFTGMVKNHGLM
                     FFVRFLFGVGESPMFPSNAVFNTYWFSKHEKGRAASALLAGSYFGPVLAPIVTVTISN
                     AFGWQAVFYIFGAVGFLIAILWAIIAKDLPEHHKMVNEAEKHFIMENRDVVKTKKTTP
                     PWGAFFSRFSFYAIALQYFVVQFVITLFLYWYPTYLMEQFHVDRDTMSKIAGIPWLVM
                     FVFILSGGTISDKILSSGKSRFAARGIIAIAGFAIFGISLNFAVTSDSLVKNIVWMSL
                     CLSSIGLAMVMSWASATDLGRNYSGTVSGWMNLWGNIGAVLSPIFAGYLAEMIGWIPT
                     LRSMLILVVVAIVLWFFVKPDQPLIKDEA"
     gene            1777..2373
                     /gene="srtA"
                     /locus_tag="PTC28_000656"
     CDS             1777..2373
                     /gene="srtA"
                     /locus_tag="PTC28_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class A sortase SrtA"
                     /protein_id="HDK5715973.1"
                     /translation="MQKLTRGLVPLIGIALILAGVYLIFKPKIDAYLTNKENEQKIEV
                     YEESQQNAPSKVPEIPKDPSKVVGVLEVPSVGIKEAVYPGPATPEQLERGVSLAEKDE
                     SLKDQNIAIAGHTNYSLNYQFTELHKAKKGAEVIFKLGKETRKYQITSIKDVDPYQVE
                     VLEEMKKDKDQLTLITCDDYDEKTGQWLTRKIYVAERV"
     gene            2544..3689
                     /locus_tag="PTC28_000657"
     CDS             2544..3689
                     /locus_tag="PTC28_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HDK5715974.1"
                     /translation="MHILIAPDSFKESMTAMQAAEAIEQGWRDVAGDTITFHKIPMAD
                     GGEGTTQSLHDALRGVWRTIPVQDPLGRPISATYSLANEGQTAIVEMAAASGLDLVLS
                     NERNPRMTSTYGTGQLLLDALDQGVSHIILGIGGSATNDGGAGLLQAIGVQLLDAKGQ
                     PISRGGEALAQLNRIDMSHIDERFQNVQLEIACDVDNPLLGPNGATAVYSAQKGASQA
                     DQVILEAALSHFHTVIEQDLKQQVADIPGAGAAGGLGAGLLACLPVDLKHGIDIVLSV
                     TQFDEYVQRADLVITGEGAIDGQTVYGKTPVGVAKAAKKYGKPVIAIAGKLGVGYEAV
                     EKYGIDAVYSMSTGPMSLEQAINEGPVHLKQWARHMAKFYQLMKEKR"
     gene            3694..4227
                     /locus_tag="PTC28_000658"
     CDS             3694..4227
                     /locus_tag="PTC28_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715975.1"
                     /translation="MQKFHYKEYFWDVTKKIMTVFNDKDEPVYQLKLARGQQRFKLSL
                     LFNYLWQEYEIEDGENRFYLSRNKGVFGWLLPTWQVYQNEQLMGRFRASSLLPLRFYY
                     DTTEGDRFKFKFRFFTYNAEVRDESGRDVMSVAASIFKLKPEYRIEIHDGMTHPALLI
                     LLFQVGQEFISIARKSH"
     gene            complement(4299..4973)
                     /gene="scdA"
                     /locus_tag="PTC28_000659"
     CDS             complement(4299..4973)
                     /gene="scdA"
                     /locus_tag="PTC28_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair di-iron protein ScdA"
                     /protein_id="HDK5715976.1"
                     /translation="MIATQDKVADIVTHYPKTADVFRKHGIDFCCGGQISLEEAVSNH
                     PKLSLTPLLQELEDASQQQGEGMQPQYLSVPSLIQYIQARYHDTLREEFKQLTPYVTK
                     LSRVHGPNHPNLVTLKSTFDAFKSAMLTHTDEEDQNAFPKLVRSANGETVEDIDAVVQ
                     SLVDDHDEAGALLQQMRELTHDFQPPAEACGTWRLVYDRIAHLERETHAHVHLENHVL
                     FPKITG"
     gene            5495..6580
                     /locus_tag="PTC28_000660"
     CDS             5495..6580
                     /locus_tag="PTC28_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000171355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HDK5715977.1"
                     /translation="MAMIFEKMAQADYEQLVFCHDETTGLKAIICIHDTTLGPALGGC
                     RFWNYESEEDAIVDVMRLAKGMTYKNAAAGLNLGGAKTVVIGDPKTDKSEAFFRALGR
                     YIHSLDGRYITAEDVGTTVEDMDFIRLETPYVTGVSESYGSSGNPSPMTALGVYYAMK
                     RTAKEAFGSDSLDGKTVAVQGVGNVAYHMCKYLHEEGAKLIVTDINEEAVQRAVNDFN
                     AEAVGINDIYQVDADIFAPCALGGILNDKTIPELKVKMICGSANNQLLEENKHGQMLE
                     ERGITYAPDFVANSGGVINVADELYGQYNRERAEKKVKNIYEQMDKIFTIAKEEGILP
                     LQAAEHLAESRIDTMMRVHSKYSATQK"
     gene            6901..7971
                     /locus_tag="PTC28_000661"
     CDS             6901..7971
                     /locus_tag="PTC28_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit IIC"
                     /protein_id="HDK5715978.1"
                     /translation="MEVAEQRMTFKTFMFKVLNGLAIAIIAGLIPNAVLGGLFKYLSQ
                     YADIFATMNQVVLGVQFALPIMVGVLIALQFNLNPMATALVGAASFVGSGAAKVTPAG
                     WQLVGIGDLINTMITASIAVLIVLWLGNRLGSLNVILLPILVGGGAGLIGVATLPYVS
                     KITLAIGSLVNTFTTLQPVLMGVLIAVLFSFIIVSPISTIGVGLAIGISGLAAGSAAI
                     GVAVAAVVLFIGTLRVNKIGVPIAILLGGMKMMIPNIIRYPILLLPIGITAAVTGAAG
                     TLFGISGVKETAGFGIVGLVGPIKALELMDGNGMTNLLIVLAVFFVIPLVVGFIVDYI
                     LWKVLKLYDSEIYRFTATEDNK"
     gene            8268..10517
                     /gene="pflB"
                     /locus_tag="PTC28_000662"
     CDS             8268..10517
                     /gene="pflB"
                     /locus_tag="PTC28_000662"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HDK5715979.1"
                     /translation="MIKDTQTTHNAWEGFKTGRWTRHVDVREFIQLNFTGYQGDDSFL
                     AGPTEATTKLWDQVMVLSKEERERGGIWDMDTKVPSTILSHDAGYLDESLEQIVGVQT
                     DKPFKRSMQPFGGIRMAKAACEAYGYELDKETEHIFTEYRKTHNQGVFDAYSKEMLAC
                     RKAGIITGLPDAYGRGRIIGDYRRVALYGVDFLMAEKQKDFNDLSSTMTEDVIRLREE
                     VSEQYRSLNELKQLGERYGFDLSRPAENFKEAVQWLYLAYLAAIKEQNGAAMSLGRTS
                     TFLDIYAERDLQAGTITETEVQEIIDHFIMKLRLVKFARTPDYNALFSGDPTWVTESI
                     GGVGIDGRPMVTKNSFRFLHSLDNLGPAPEPNLTVLWSTRLPENFKRYCTKMSIKTSS
                     IQYENDDLMRESYGDDYGIACCVSAMRIGKQMQFFGARANLAKTLLYAINGGKDEKSG
                     AQVAPNFAPIQSEILDYDEVYQQFDEMMEWLAGVYINSLNVIHYMHDKYSYERIEMAL
                     HDTDVHRTMATGIAGLSVAADSLSAIKYGQVRTIRDENGLVVDFETTGDYPKYGNNDP
                     RVDDIAVQLVESFMKKLRKHQTYRNSEHTMSVLTITSNVVYGKKTGNTPDGRKAGEPF
                     APGANPMHGRDDHGALASLSSVAKLPYDCCKDGISNTFSIVPKSLGKEEATQEQNLVS
                     ILDGYALQHGHHLNINVFNRETLLDAMEHPEEYPQLTVRVSGYAVNFIKLTREQQLDV
                     ISRTFHESM"
     gene            10576..11337
                     /gene="pflA"
                     /locus_tag="PTC28_000663"
     CDS             10576..11337
                     /gene="pflA"
                     /locus_tag="PTC28_000663"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase-activating protein"
                     /protein_id="HDK5715980.1"
                     /translation="MIKGHIHSIESLGTVDGPGLRYIIFTQGCLLRCLYCHNPDTWKV
                     NEPSRTATADELVNEIVPYLPYFQASGGGVTISGGEPLLQMPFIEELFEKLHAQGIHT
                     CIDTSLGCANDTEAFKKHFDQVLTHTDLLMVDIKHIDNEKHQQLTGKPNTHILNYIQY
                     LADKGQPIWIRHVLVPGLTDAPEDLKALGTFINQLGNVEKFEILPYHQLGVHKWEALG
                     VPYALNDVEPPTDEDVERAYGYVNFTGVTPLTPVR"
     gene            11940..12599
                     /locus_tag="PTC28_000664"
     CDS             11940..12599
                     /locus_tag="PTC28_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDK5715981.1"
                     /translation="MTRTLILGANGGVGQHLVKQMHAQGEDFTAAVRKKEQQQALASQ
                     GISATLIDLETATIDDLTDAFLPYDQVIFSVGSGGSTGADKTIIVDLDGAVKAIKASE
                     AANIEHFIMVSTYDSRREAFDASGDLKPYTIAKHYADDYLRHSRLTTTIVHPGALTND
                     QGTGKVNVAELFEQPDVRQIPREDVATVLYEVATNAKHRGKEFQVLTGNNDISEALSS
                     L"
     gene            12894..14618
                     /locus_tag="PTC28_000665"
     CDS             12894..14618
                     /locus_tag="PTC28_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDK5715982.1"
                     /translation="MKKTWRYAWVLLLCVTLVLSACGKSSSQTSSNENNKTEKSNAKG
                     GTLNVGLTAPPEGNFQDVFASSTSDSDVVAFFNDGLTESDEHLNIKPKILSWEKSKED
                     DLKYTFKVKKGIKWQDGNPFTINDWIFTLETIADPDYTGPRYSGAAVIKGAEEKHKGK
                     AKTISGLKKIDDYTVELTFKAAKANNLMALWTSSVISEKVFKDIPVKDMAKSDAVRKH
                     PIGIGPFIVKNIVDGESVELVKNKDYWQGEPNIDKVNLRVVEQTAMAQALEKGDIDMA
                     DVTGPIAKEIKDHKAENVKILESPSTSYAIIGFVLNDYDKKEMKIGKERPKYQDKRLR
                     KAMAYAINRKEWIDAFFYGYAKPLYGLIPSEHWSGAKKGEVTEYDYNVEKAKKLLDEA
                     GYKDKDGDGFREDPNGKPFVINLKHYSGSNPTFEPRTAALKGYWEKVGLKTKVEMEEF
                     GKYNNDLENASSDMEVYFRSWQQGSDPDPSDLYKSTALWNESRYNNPKADKLLEEAVD
                     SKIVGDDNDKRRKKYIEWQKLMTDDLPVIPITEFINTTAVSNKVKNYEVSLKGANPMY
                     QWSVEEKK"
     gene            14746..15753
                     /locus_tag="PTC28_000666"
     CDS             14746..15753
                     /locus_tag="PTC28_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5715983.1"
                     /translation="MKMGQLLEINNLTTTFDIEGQPYAAISNIDLTVNKGEVMGIVGE
                     SGSGKSVLSLSILKLLPEKISNIASGEVIYEGKRIDQYDVEQMNQMRGKEIAMIFQEP
                     MTSLNPVFTIGNQLMEMLMLHLKLSKSEAKAKVISLLKQVGIPRAEKVVDEYPHQLSG
                     GMRQRVMIAMAISCSPQLLIADEPTTALDVTVQAQILDLLKRIQEDTQMSVIFISHDL
                     GVISEICDRVAVMYAGEVVETASVEDIFSQPMHPYTQLLLKAIPRLDVKQEKLETIRG
                     SVPSLDELPKVGCRFANRCPHAMAICTLKDIEPYQFEREHQVKCHLYTQDTALKEANE
                     S"
     gene            15750..16739
                     /locus_tag="PTC28_000667"
     CDS             15750..16739
                     /locus_tag="PTC28_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HDK5715984.1"
                     /translation="MSESYVLEVKNLKQYYPIKAGVFQRKVGEVKAVDNISFKIKKGQ
                     TVGLVGESGCGKSSAGRTILCLQKATEGEILFCGQDLTKLKGKALREARKGFQMVFQD
                     PYASLNPMQMVGDIVGEPIRNYYHKKQRDIEDEVKDLLKRVGLNEADYYKYAHEFSGG
                     QRQRVGIARALALKPRLIIADEPVSALDVSVQSQVLNIMDELQEEMGLSYLFIAHDLS
                     VVKHVSDYICVMYLGHILEQGPADAIYENPQHPYTQSLISAIPDINPTQRKKRILLEG
                     DLPSPSHPPVGCPFHTRCPVAEARCAQQKPQAVEVGKEHYAACVLLEEGEVKL"
     gene            16736..17698
                     /locus_tag="PTC28_000668"
     CDS             16736..17698
                     /locus_tag="PTC28_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016426171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5715985.1"
                     /translation="MITLIIRRFLLMIPMLLLMSVVIFTIAKLQPGDAFTGNMDPKLG
                     AKYYEEQREKLGLNDPIPMQYMKWGARVLHGELGESIRYKRPVMDLIEERMPNTILLG
                     TVSLIITYILAFPLGIISGRKPYSLYDYSIQLLNYLMLAIPSFVAGVFAIYVFAFQFG
                     IFPYSGSVEIGLEPGTFEYYVSKLYHVILPGTVLGLLSTAGYIQFLRNDIIENARKDY
                     IRTARAKGLSESKIYNKHILRNSIIPIVTFFGGDVLSVFGGAVITESIFSFPGIGKLL
                     IESISGKDYPLMMALLLFFSFLGLLANLISDITYSIVDPRIKSN"
     gene            17710..18603
                     /locus_tag="PTC28_000669"
     CDS             17710..18603
                     /locus_tag="PTC28_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5715986.1"
                     /translation="MENQQLKKSQSPLQIARKKFMKNKTAMAATIVLGMIVIISFLAP
                     FIAPHDPNVQNLVLIKGDMSLEHWLGTDSGGRDIFSRLLYSGRVSLTFGLFTSIGLML
                     IGIVIGMISGYYGGWVDTVLMRFTEFVMLFPFIPFAVVLNATFSHDIESQYGSAIVLG
                     TVLVLLSWVGIARMVRGKVMQEKENEYFLAAQSIGTPVHKILLKHLLPNILSVIIVQA
                     TLVFAVQIVAEAGLSFLGFGISKEVPTWGNMLTDAQEGDILRSKPWIWMPPALIITVT
                     ILCINFIGEGLKDALNPKSKR"
     gene            18835..20556
                     /locus_tag="PTC28_000670"
     CDS             18835..20556
                     /locus_tag="PTC28_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDK5715987.1"
                     /translation="MKKAYRYLWFLSLIVVVVLSACGKNGNETSNTSNKTGKSDAKGG
                     TLTVVIAEPPEGNFQSIFTGSTGDSNVIDFFNDSLIDVGDDLKIKPKILSWEKDKNDD
                     LKYTFKVKKGIQWQDGNPFTINDWVFTLETLADPDYDGPRYSGVAVIQGAEEKRNGQA
                     DRISGIKKIDYYTAEITFKEHKANNLLELWTSAPISEKVFKDIPVKDMAKSDAVRKNP
                     IGIGPYKVKRIVDGESVELVKNKDYWRGEPNIDNINLRVVEQTSMTQALENGDIDMAT
                     ITAPIAKEIKDSGSENLQLLQAPSTSYAIVGFVLNDYDKKAQKIGKERPKYQDKKLRQ
                     AMAYAINRKEWIDAFYYGYGKPLNGLIPSAHWSGAKEGDVKEYKYDVDKAKQLLDEGG
                     YKDKDGDGFREDPQGKPFVVNLKHYAGSNPTFEPRTAALKGYWEKVGLKTKVEMEEFG
                     KYSSDLEKSSKDMEVYFRTWQQGSDPDPSELYRSTALWNESRYNNPKADKILDEAVDT
                     KVVGDDNDKRKEKYLEWQKIMAEDVPVIPIVELEDVTAVSSRVKNFEVSLKGSNPIYE
                     WSVEDKK"
     gene            20662..21672
                     /locus_tag="PTC28_000671"
     CDS             20662..21672
                     /locus_tag="PTC28_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5715988.1"
                     /translation="MNESKLLEVKNLSTAFEIEGQQYDAISNIDLEINKGEILGIVGE
                     SGSGKSVLSLSILNLLPEKIASIRSGEVRYKGQRIDNMAHEAFNKVRGNEVAMIFQEP
                     MTSLNPVFTIGNQLMEMIMLHLKLSKSEARAKAIQLLQDVGIPRANKVVDEYPHQLSG
                     GMRQRVMIAMAISCAPHLLIADEPTTALDVTVQAQILALLKRIQTETQMGVIFISHDL
                     GVISELCDRVAVMYAGKIVELAPVEEIFTHPKHPYTQLLLKAIPRLDVQQETLETIKG
                     SVPSLVHLPQQGCRFVNRCPHAMAMCQTQDVSGIQVADAHHVFCHLYQNETQLKGVGQ
                     HD"
     gene            21665..22651
                     /locus_tag="PTC28_000672"
     CDS             21665..22651
                     /locus_tag="PTC28_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDK5715989.1"
                     /translation="MTDYILEVNDLKQYYPIKGGVFQRKIGEVKAVDGISFVIEPGQT
                     VGLVGESGCGKSSAGRTILQLQQAHSGEIKFCGQDITKLRRRALREARKGFQMVFQDP
                     YASLNPMQMVGDIVGEPIRNYYHKKQRDIEDEVKDLLKRVGLNEADYYKYAHEFSGGQ
                     RQRVGIARALALKPRLIIADEPVSALDVSVQSQVLNIMAELQEEFGLSYLFIAHDLSV
                     VKHVSDYICVMYLGHILEQGPAEAIYENPSHPYTKALISAIPEIDPRQRKERILLEGD
                     LPSPSDPPSGCPFHTRCPVAEARCAEVKPPSVEVSANHYAACVLLENGGVAQ"
     gene            22648..23610
                     /locus_tag="PTC28_000673"
                     /pseudo
     CDS             22648..23610
                     /locus_tag="PTC28_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016426171.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            23622..24515
                     /locus_tag="PTC28_000674"
     CDS             23622..24515
                     /locus_tag="PTC28_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5715990.1"
                     /translation="MDKLKKAKSKSPLTIARKKFLKNKPAMIATVVLGLIAIISFLAP
                     LLAPYDPNLQNLVLIKGEMSAEHWLGTDSGGRDILSRLLYAGRVSLLFGFFTSIGLMT
                     IGVLIGMISGYYGGWVDTVLMRFTEFVMLFPFIPFAVVLNATFSGKIENQYGSAIVLG
                     LVLIALSWVGVARIVRGKVMQEKENEYFLAAQSIGTPVYKILFKHLLPNILSVIIVQA
                     TLVFAVQIVAEAGLSFLGFGISKSVPTWGNMLTDAQEGDILRSKPWIWMPPALIITVT
                     ILCINFIGEGLKDALNPKSRR"
     gene            24833..25090
                     /locus_tag="PTC28_000675"
     CDS             24833..25090
                     /locus_tag="PTC28_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5715991.1"
                     /translation="MLKKLMLLFFAMVISTTIAETFLIAGTWQYLLMQSLSLAFIIFF
                     IYHFVVFQLQEKRQEKRYQDRQWIVNKEHEDENVKKRLVRK"
     gene            complement(25476..26375)
                     /gene="sdaAA"
                     /locus_tag="PTC28_000676"
     CDS             complement(25476..26375)
                     /gene="sdaAA"
                     /locus_tag="PTC28_000676"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent,
                     subunit alpha"
                     /protein_id="HDK5715992.1"
                     /translation="MFDTMKELIDYATENNTTFSEIMIKHEMETRGMTREAVMDMMQQ
                     NLDTMREAVQKGTTGEGVKSVTGYTGQDAIKIHKYNQHNKALSGYDMMSAVEGAVATN
                     EVNAAMGIICATPTAGSSGTIPGILFKLEQSHDLTNDQMLEFLFSASICGMVIANNAS
                     VAGATGGCQAEVGSASAMAAAAAVQTFGGTPEQAGHALAISISNLLGLVCDPVAGLVE
                     IPCVMRNAIGSGNGLISADLALAGVESRIPVDEVIEAMDKVGRNLPASLRETGLGGLA
                     GTPTGEAIKAKIFGDSKRSEVFS"
     gene            complement(26391..27068)
                     /gene="sdaAB"
                     /locus_tag="PTC28_000677"
     CDS             complement(26391..27068)
                     /gene="sdaAB"
                     /locus_tag="PTC28_000677"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent
                     subunit beta"
                     /protein_id="HDK5715993.1"
                     /translation="MARTKDYQSAFDIIGPVMMGPSSSHTAGAVKIGQAARAVLGDTP
                     EKIVVNYYESFAETHKGHGTDLAIIGGLLGFSTFDSRIKTSTKIARSEGIDFEFIEKS
                     GSSLGEHPNCAVIEIDHGDRHVELNGISIGGGAFKVKSIHVNQMCILMAHTPPILVID
                     GECKIAEVNHLINDLIEHEVDINEEIKTMTKGHCLLALHLNKPIKSELLESIKEKYAF
                     LNFSYID"
     gene            complement(27083..28114)
                     /locus_tag="PTC28_000678"
     CDS             complement(27083..28114)
                     /locus_tag="PTC28_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HDK5715994.1"
                     /translation="MDFILGIGTLLVVLLAMTLFLKFAPNGKVSLQALSGAACASFLP
                     EAFLKYAIGGVFHSEYFIKLGEVAGSLSGVAVGILTCLKFGINPVFAVLTGLVLFDFK
                     LLPAFIAAYFVAFGIKALEKYVPEGLDLIVVILLSPAIAYGIASIVSPSVTAVLKQIG
                     TAITAVGDNNPYALALVIGAIVPVVGMTPLSSMVFTSLLGLTGIPMAIGALGCMGSSF
                     VNFMMFRKLRIGNAGKAFAVAVEPLTQIDTIAKYPIQLYGTNAVVGMVNGLFITYMGI
                     VVNQPGMATPIAGPIVALGFNEVVPTVITIVVVAIISIIMSFFIGTFISKKRPTLDIQ
                     VPHVNQQTN"
BASE COUNT         8886 a         4892 c         6186 g         8242 t
ORIGIN      
        1 aaagaatttt ctaaaaacgt tcaaaaaatg ttcaaaattt tattgtaacc gctttcttga
       61 tgtggtatat tcagatagct acatgaaagg tcatcaggtg acctaatgaa agaggggcaa
      121 aaattatgag tcaaaagaaa acgaatgtcc gttggctatt tgcaggtgtg tttttcttaa
      181 ttggtgtcat cgcctatatg gaccgctcta atatctctta tattgcggta ccaatgatgg
      241 aagacttaca tcttacaaaa gcacaatttg gatttttagg ttcatttttc tctttaggtt
      301 atgcattgat gcaagtacca tcaggatttt tagctgagaa atacggacct aaaaagatga
      361 ttacgattgc gttagtatgg tggagtgcat ttacaatctt tacaggaatg gtgaaaaatc
      421 atggattaat gtttttcgtc cgttttctat tcggtgtagg ggaatcgcca atgtttccgt
      481 cgaacgctgt attcaataca tattggttca gcaagcatga aaaagggcgt gcggcaagtg
      541 cgttattagc gggttcttat tttggacctg tacttgcacc aattgtaaca gtgacaattt
      601 ctaatgcatt tggttggcaa gctgtgttct acatttttgg tgcggttggt ttcttaattg
      661 cgattttatg ggcaattatt gcgaaagact taccagaaca tcataaaatg gtgaatgaag
      721 cagaaaaaca tttcattatg gaaaaccgtg acgttgttaa aacgaaaaag acaacaccac
      781 catggggcgc gtttttctca cgctttagtt tttatgcgat tgcattacaa tatttcgtag
      841 ttcaatttgt tattacatta tttttatact ggtatccaac gtacttaatg gaacaattcc
      901 acgttgaccg agatacaatg agtaaaatcg cgggtattcc ttggttagta atgttcgtct
      961 tcattttaag tggtggtacg atttcagata agatcttgag cagtggtaaa tcacgttttg
     1021 cggcacgtgg tattattgcc attgcaggtt ttgcgatttt tggtatttca cttaatttcg
     1081 cggtcacttc agatagctta gtgaaaaata ttgtttggat gtcactttgt ttgagtagta
     1141 tcggtttagc gatggttatg agctgggctt cagcgacaga tttaggacgt aactattcag
     1201 gaactgtttc agggtggatg aacttatggg gcaatatcgg tgcggtatta agtccgatct
     1261 ttgcgggtta ccttgcagaa atgatcggtt ggattccaac attacgctcg atgcttattt
     1321 tagtagtcgt tgcgattgta ttatggttct ttgttaagcc ggaccaacct ttaattaaag
     1381 acgaagcgta ataaatagag gaagtgggac tgaaattttt cacgctattg acgcaatgtt
     1441 ttctttaact tcccctttcc atatgttttg tacttttgat tgccttcatg gttttgcgtt
     1501 cctagggact gaatcttcaa ctcaattcag cttgattgaa atgtacactt gaccggtgtc
     1561 gaattggatt ttgggagcag tacagaaatc tcatgtgtca ccaaggtttc gtcgtactgc
     1621 cccccgcaag gctgactcga cttctcaaaa gtgcagacat tgagaagtca gacagttact
     1681 gcgataaaca gtaaccacta ttttcttttt tattttcaat ttgggcttga ggggatataa
     1741 taagaggcat aaaatcatcg tgaaagaggt cagtcgatgc aaaaattaac acgtgggttg
     1801 gttccactta ttggtattgc attgatttta gcaggcgtat atttaatctt taagccgaaa
     1861 attgatgcat atttgaccaa taaagaaaat gaacaaaaaa ttgaagtata tgaagaaagt
     1921 caacaaaatg caccatcaaa agtgcctgaa attccgaaag acccgtcgaa agtcgttggt
     1981 gtattagaag tgccgtcagt cggtataaaa gaagctgtgt atcctggtcc tgcgacacct
     2041 gaacaattgg agcgcggtgt cagtttggcg gaaaaggatg aatcactcaa agaccaaaat
     2101 atcgctattg cgggacatac gaattatagt ttgaactatc aatttacaga gttacacaaa
     2161 gcgaaaaagg gtgcagaagt aatttttaaa ctgggtaaag aaacgcgcaa atatcaaatt
     2221 acgtcgatta aagatgtcga tccgtatcaa gttgaagtgt tggaagagat gaagaaagat
     2281 aaagaccaac tgacactcat tacttgtgat gattacgatg agaaaacagg tcagtggctg
     2341 acacgcaaaa tttatgtagc tgaacgtgtg tagtcgtcaa atggataatt aaacttagag
     2401 gtgatgtcgt atcgcatgtg cgaggcatta ccttttttat ttagcatgtt aatggtgttg
     2461 ttgcgagcgg tttcataatt attttgaatt ctcatcacct gacctataat ataagaagta
     2521 ctaaggttaa gggaggacta ctgatgcata tactcattgc acctgactca tttaaagaat
     2581 ctatgaccgc gatgcaagct gcagaagcaa ttgaacaagg ttggcgtgac gttgcgggtg
     2641 atacaataac gtttcataaa atacctatgg ctgatggggg agaaggaacg acccaatcac
     2701 ttcacgatgc actacgaggt gtgtggcgaa cgattccagt tcaagaccca ttaggtcgtc
     2761 ctatttcagc gacgtacagc cttgcgaatg aaggacagac cgcaatcgtt gaaatggcgg
     2821 cagcttctgg attagattta gtgttgtcaa atgaacgaaa tccacgtatg acctctacgt
     2881 atggcacggg acaattgttg ttggatgcgc tcgatcaagg tgtgtcacat attattttag
     2941 ggattggcgg cagtgcgacg aatgatggag gtgctgggtt actccaagcg ataggggtcc
     3001 aacttttaga tgcaaagggc cagccgattt ctcgaggtgg tgaagcttta gcgcaattaa
     3061 atcgtatcga catgtcgcat atagatgaaa ggtttcaaaa tgtgcaactt gaaatcgctt
     3121 gtgatgtcga taatccgttg ctcggtccga atggggcaac tgcagtttat agtgcgcaaa
     3181 agggtgcaag tcaagcggac caagtcatat tagaagccgc tttgtcacac tttcatactg
     3241 taattgaaca agatttaaag caacaagtgg ccgatattcc aggtgcgggt gctgcagggg
     3301 gattaggtgc aggtttgttg gcatgtcttc ccgtagactt aaaacatggc attgacattg
     3361 tcctctcggt gacgcaattt gacgagtatg tgcaacgtgc agaccttgtc attactgggg
     3421 aaggtgcgat tgatggacaa actgtgtacg gtaaaacacc agtgggcgtc gctaaagcag
     3481 cgaaaaagta tggaaagcct gttattgcga ttgccggcaa attgggcgta gggtatgaag
     3541 cagttgaaaa gtatggtatt gatgcggtat acagtatgtc aacagggccc atgtctctag
     3601 aacaagcaat caatgaaggg cctgtgcact taaaacaatg ggcgcggcat atggcaaaat
     3661 tttatcaact gatgaaagag aagaggtaaa cggatgcaaa aatttcatta caaagaatat
     3721 ttttgggatg ttacgaaaaa aatcatgacg gtattcaatg acaaagacga acccgtatat
     3781 caattgaagt tggcccgtgg tcaacaaagg ttcaagctgt cattgctatt caattattta
     3841 tggcaagagt atgaaattga agatggcgaa aaccgttttt atttatcgcg gaataaaggt
     3901 gtcttcggtt ggttattgcc aacttggcaa gtgtatcaaa atgagcagtt gatggggcgt
     3961 tttcgtgcga gttctctttt gccgttacgc ttttactatg atacaacgga gggcgaccgt
     4021 tttaagttta aatttcgctt ttttacatac aatgctgaag tgcgcgatga atcggggcgt
     4081 gatgtgatgt ctgttgcagc gtcaattttt aagttgaagc ctgaataccg tattgaaatt
     4141 catgacggta tgacccatcc agcgctgttg attttactct ttcaagtagg acaagaattc
     4201 atttcaatcg caagaaaaag ccactgaaac gatagaggcc tcagtgacta tatattcaaa
     4261 taggttggtg atgtcttcac atgtgatcga gggcgtcatc aacctgttat tttaggaaag
     4321 agcacatggt tttctaagtg gacatgcgca tgtgtttctc gttctaagtg tgcaattcgg
     4381 tcgtaaacga gtcgccaagt accgcatgct tcagctggcg gttggaaatc atgcgtcagt
     4441 tcacgcatct gttgaagtaa tgcccccgcc tcatcgtgat catcgacgag cgattgaacg
     4501 acggcatcta tatcttcaac agtttcacca ttggcagaac gcaccaattt aggaaaagcg
     4561 ttttggtctt cttcatctgt atgtgtcaac attgctgatt taaatgcatc aaaagttgat
     4621 tttaatgtca ctaaattcgg atggtttgga ccatgcacgc gtgagagttt tgtgacatac
     4681 ggtgtcaatt gcttgaactc ttctcttaat gtgtcatgat agcgagcttg aatatattga
     4741 attaaagaag ggacagataa atattgtggt tgcatccctt caccttgttg ttgacttgca
     4801 tcttctaatt cttgaaggag tggtgtgagc gacaatttag gatggtttga aacagcttct
     4861 tcaagagaaa tctgtccccc acagcaaaaa tcgatgccgt gtttgcggaa aacgtctgct
     4921 gttttaggat aatgtgtaac gatatccgca actttatctt gggtagcaat catactaaaa
     4981 cttcctttcg tcttgtaata cattcatcat atcaataatg tgaaaaaatg aacattaggg
     5041 aaaaggatgt gttcacttcg aaaaatggat atatttgaca tgattatctc cttagctcaa
     5101 aaattttaga attacaaata acgggaaatt acacaggtga cctttttaca gagacgtcag
     5161 cgcaatgcaa gaggatagaa actttgatgg tactggtaaa ataagcattt gtgtcaatta
     5221 agggaaaaac gagcatcgct acataaattt taatttaaaa atatctcaaa aaatcaaatt
     5281 tgtaatgata caaaaagttt taaatgtgct ataatataga attggaaccg cttacaccat
     5341 tgtattgtat ttgctgaagg ggtcaaaaaa tagcaaatat gatatattgg ataatgcgga
     5401 gtgggacgga tatctcactt aattgaatag ataagacgtt ccattctgat attatgtggt
     5461 ttcattgacg ggaaatgtga aacacaaagg aggaatggca atgattttcg aaaagatggc
     5521 acaagctgat tacgagcagt tagttttttg ccacgacgaa acaacaggtt taaaagcaat
     5581 tatttgtatt catgacacaa ctttaggtcc agcattaggg ggttgccgct tctggaatta
     5641 cgaaagtgag gaagatgcga tagtcgacgt gatgcgctta gctaaaggga tgacatataa
     5701 aaatgcagct gccggcctta atttaggtgg cgcaaaaact gttgttattg gtgatccgaa
     5761 aacagataaa tctgaagcat tctttagagc acttggtcgc tatattcata gtttagatgg
     5821 ccgttacatt actgcagaag atgtaggaac tacagtagaa gatatggatt tcattcgttt
     5881 agaaacacca tatgtgacag gtgtcagtga gtcttacggt tcaagtggta atccaagtcc
     5941 gatgacggca ttaggtgttt attatgcgat gaaacgtaca gcgaaagaag catttggctc
     6001 tgacagttta gacgggaaaa ctgttgctgt acaaggtgta ggtaatgtcg catatcatat
     6061 gtgtaaatac ttacatgaag aaggcgcgaa actgattgtg actgatatca atgaggaagc
     6121 cgtgcaacgt gcagtgaatg actttaatgc tgaagcggta ggaattaatg atatctatca
     6181 agttgacgct gacatttttg cgccatgtgc actgggtggt attttaaacg ataaaacgat
     6241 tccagagctt aaagtgaaaa tgatttgcgg tagtgccaac aaccaattgc tagaagaaaa
     6301 caagcatggt caaatgttag aagaacgcgg cattacttat gcacctgact ttgttgctaa
     6361 cagtggtggt gtcatcaacg tagctgacga gttgtacggt caatataacc gtgaacgtgc
     6421 tgaaaagaaa gtgaaaaaca tttacgagca aatggataaa attttcacga ttgcaaaaga
     6481 agaaggtatt ttaccattac aagcagcgga acatcttgca gaatcacgaa ttgatacgat
     6541 gatgcgtgta catagtaaat attcagcaac tcaaaaataa tcatacaagc ataaagagag
     6601 ataggggaac tttaatgtgt ccttgtctct tctttttttg cgtgaaaagt gaatgatgta
     6661 cggaataaac gacaagttaa aataaaatga agttggattg aattatgtca cattaaattg
     6721 cgaatatttg aaaaaatggt gttgctaaat gatctttgtt cggttacgct atcactattg
     6781 tggtacgaag cgcatttgaa ggggacagaa aaagtggaaa agtagaatga acggcgtacc
     6841 tcgaaaacca tttgaagcgc attggttcaa atgtaattta acagtgaggt ggtaaaggaa
     6901 atggaagtag cagagcagag aatgacattt aaaacattta tgttcaaagt attgaatggt
     6961 ttagccatcg caattattgc cgggcttatt ccgaatgcag tgttaggtgg attgtttaaa
     7021 tatttaagcc aatacgctga tattttcgca acgatgaatc aagttgtctt aggggtacaa
     7081 tttgcgttac cgattatggt cggtgtcctc atcgcgttac aattcaattt aaatccaatg
     7141 gcaacagctt tagttggcgc agcatcattt gtcggttcag gggccgctaa agtgacgccg
     7201 gctggttggc aattggttgg tattggtgat ttaattaata caatgattac ggcatctatt
     7261 gcagtactga ttgtgttatg gttaggcaat cgcttaggaa gtttgaacgt gattttattg
     7321 cctattcttg tcggcggagg tgcaggactg atcggtgtag cgacattacc ttatgtcagc
     7381 aaaattacgt tagctatcgg tagtttagtg aatacattta cgacgttaca gcccgtgttg
     7441 atgggcgttt tgattgcagt cttattttca ttcattattg tttctccaat ttcaacaata
     7501 ggcgttggtt tagcgattgg tatttcaggt ttagcagcag gatcagcagc gattggtgtt
     7561 gccgttgcag ctgtcgtttt gttcatcggc acattacgtg tgaataaaat tggtgtcccg
     7621 atcgcgattt tattaggtgg tatgaaaatg atgattccta atattattcg ctatcctatt
     7681 ttactcttac caatcggcat tacagcagcc gtaacaggtg cagcaggtac attgttcggt
     7741 atttctggtg tgaaagaaac agcgggattc ggtattgttg gtttagtcgg cccaattaaa
     7801 gcattagaat taatggacgg caacggtatg accaacttac tgattgtcct tgcggtattt
     7861 ttcgtcattc cattagttgt tggctttatt gtcgattaca ttttgtggaa agttttaaaa
     7921 ttgtatgact ctgaaattta tcgttttact gcaacagaag ataataaata aaagcattga
     7981 aagtgtcatt ttgtcgaaag agacatagtg gcgctttttt atttcggggc ctaaaccttt
     8041 agaaaacgac agcaatcccg ccttgatcca ggtcaatcaa gttatctaaa atagttacac
     8101 aacaaaaaag ttctttttaa aattcttata aattgtgaca aattattata caaattgaca
     8161 cgaaatgatg acattttata aaacgctttc aattttaagt gattatattc acaattcttg
     8221 gtatactact tgtgaaatga tgaacaaacc taattggagg taaagacatg attaaagaca
     8281 ctcaaactac acataatgca tgggaaggtt ttaaaactgg acgttggaca cgccatgtgg
     8341 acgttcgtga atttatacaa ttaaacttta caggttacca aggcgatgac agttttttag
     8401 ccggtccaac tgaagcaacg acgaaattat gggatcaagt gatggtgtta tcgaaagaag
     8461 agcgtgaacg tggtggtatt tgggatatgg atacaaaagt gccatcaacc attttatctc
     8521 atgatgcagg ttacttggat gaatcattag aacaaattgt tggtgtacaa acagacaaac
     8581 cattcaaacg ttctatgcaa ccatttggcg gaatccgtat ggcaaaagca gcatgtgaag
     8641 catacggtta tgaattagat aaagaaacag agcacatttt tacagagtat cgtaaaacac
     8701 ataaccaagg tgtattcgat gcctattcaa aagaaatgtt agcttgtcgt aaagcaggga
     8761 ttattacagg tttaccagat gcttatggcc gtggtcgtat tattggagat tatcgtcgtg
     8821 tcgcactgta cggtgttgat ttcttaatgg cagaaaaaca aaaagacttc aatgacttat
     8881 catcaactat gactgaagat gtgattcgtt tacgcgaaga agtgtcagaa caatatcgtt
     8941 cattaaacga attaaaacaa ctcggtgaac gttacggatt tgatttaagt cgcccagctg
     9001 aaaactttaa agaagcagtg caatggctct accttgctta ccttgctgcg attaaagaac
     9061 aaaacggagc cgcaatgagt ctaggacgta catctacatt cttagacatt tatgcagaac
     9121 gtgacttaca agcaggtacg attactgaaa ctgaagttca agaaatcatt gaccacttca
     9181 tcatgaaatt acgtttagta aaatttgcac gaacacctga ttacaacgct ttattctcag
     9241 gcgatccaac atgggtaaca gaatcaattg gtggtgtcgg tattgacgga cgtccaatgg
     9301 taacgaaaaa ctcattccgt ttcttacact cactcgacaa cttaggacca gcaccagaac
     9361 caaacttgac agtattatgg tcaacacgtt tacctgaaaa cttcaaacgc tactgtacga
     9421 aaatgagtat taaaacaagc tctattcagt acgaaaatga tgacttaatg cgcgaaagct
     9481 acggtgacga ttacggtatt gcatgttgtg tatctgcaat gcgtatcggt aaacaaatgc
     9541 aattctttgg tgcacgtgcc aacttagcga agacattatt gtatgcgatc aatggtggta
     9601 aagatgaaaa atcaggtgct caagttgcgc caaactttgc accaattcaa tctgaaattt
     9661 tagattacga tgaagtgtac caacaatttg atgaaatgat ggaatggcta gcaggtgttt
     9721 acatcaactc attaaatgtc attcactaca tgcacgataa gtatagctat gaacgtatcg
     9781 aaatggcact ccatgataca gatgtgcacc gtacgatggc aacaggtatt gcaggtttat
     9841 cagttgcagc ggactcactt tctgccatta aatatggtca agttcgcaca attcgcgatg
     9901 aaaatggact cgtagttgac tttgaaacaa caggtgatta tccaaaatat ggtaacaacg
     9961 atccacgtgt agacgacatc gcagtgcagt tagttgaaag ctttatgaaa aaattacgta
    10021 aacatcaaac gtaccgtaac tctgaacata cgatgagtgt actcacaatc acatcaaatg
    10081 tcgtttacgg taagaaaaca ggtaacacac cagatggacg taaagcaggc gaaccatttg
    10141 cgccaggtgc aaacccaatg cacggacgtg atgatcacgg tgcactggca tcattatcat
    10201 cagtagcaaa attaccttat gactgctgta aagacggtat ttctaacaca tttagtatcg
    10261 taccaaaatc attaggtaaa gaagaagcaa cacaagaaca aaacttagtc agcattttag
    10321 atggctatgc attacaacac ggccatcact taaacatcaa tgtatttaac agagaaacat
    10381 tactagatgc aatggaacac ccagaagaat atccacagct aacagtacgt gtatcaggtt
    10441 atgccgtaaa ctttattaaa ttaacacgcg agcaacaact cgacgttatt tctcgtacat
    10501 tccacgaatc tatgtaacga gtcagtaaca caacactaac agtcttaaat tgacatgatt
    10561 aaatggggga gaacgatgat taaaggacac attcattcaa tagaaagctt aggtacagtc
    10621 gatggcccag gcttacgcta cattatcttt acacaaggtt gcttactgag atgtctttat
    10681 tgccataatc cagatacctg gaaagtcaat gagccctctc gtacggcaac agcagatgaa
    10741 ctcgtgaatg aaattgttcc gtatctccct tactttcagg catcaggagg gggcgtcact
    10801 atcagtggtg gtgagcctct cttgcaaatg ccgtttatcg aagaactgtt tgaaaagctt
    10861 cacgcacaag ggattcatac gtgtatcgat acttcacttg gctgtgcaaa cgatacggaa
    10921 gcttttaaga aacatttcga tcaagtttta acacatacag acttattgat ggtggacatt
    10981 aagcatatcg ataatgaaaa gcatcaacaa ttaaccggaa aacctaatac tcatatactc
    11041 aactatattc aatatttagc agacaagggc caaccgatat ggattcgcca cgtgctcgta
    11101 ccaggtctca ccgacgcccc cgaagacttg aaagcacttg gcacatttat caaccaactt
    11161 ggcaatgttg agaaatttga aatcttacct tatcaccaac tcggtgtgca caaatgggag
    11221 gccttaggtg taccgtatgc gttgaatgat gttgaacccc cgacagatga agatgtagaa
    11281 cgtgcatacg gttatgtgaa ttttacaggc gtgacccctc ttacgcctgt acgctaaata
    11341 ttggttttgt aagaatgaca tgattctatt ttcgctatgc ataaactttt gactttaaat
    11401 gatattgaag agatggctgg gatgcaatgt gatgttgcct ctcagcttct ttattttgtg
    11461 aaatttgttg ttatatttga ctttgaaaag gtgttcatca atcgattgct gaaccgcgct
    11521 aagctttccc agcggacttg cctcaaataa agtgggcttg attgaagtat aaactggagg
    11581 gaagctaatt ggattttcgg ctatgtctaa tcactccgga gtcttgcatg cttctagcca
    11641 tctgaagtag ggtgacgttt gctattgaca gtggacaaat atgaaaagtt atatttaatt
    11701 catatcatca atacacatca atttgcatat ttttatggaa gaggtgatag caagagacga
    11761 aaaatagaaa attgagaacg tcgatgatat ggcatcgagt tgtgcaatgt catttaaata
    11821 acgattcaaa gtagaatggg gcgttaaaat gtggtaagta attattttgt gtttttaagt
    11881 ttgtcataaa gggaaatact agaataatcg cgtatgaaag agaaagagga ggatgttaga
    11941 tgacacgaac attaatttta ggtgcgaacg gtggcgtagg acaacatctt gtgaagcaaa
    12001 tgcacgcaca aggtgaagat tttactgcgg ctgtgagaaa aaaagaacaa cagcaagcgt
    12061 tagcatcaca aggcatttct gcaacattga ttgatttaga aacagcaacg attgacgatt
    12121 taacagacgc ctttctaccc tatgatcaag tcattttttc agtaggttct ggcggtagta
    12181 caggtgcaga caaaacaatt attgtagatt tagatggtgc ggttaaagcg attaaagcga
    12241 gtgaagccgc gaacattgag cacttcatta tggtgtctac gtatgactct cgtcgtgaag
    12301 catttgatgc aagtggtgac ttgaaaccct atacgattgc gaaacattac gccgatgact
    12361 atttaagaca tagccgatta acaacaacta ttgtgcatcc gggtgcattg acaaacgatc
    12421 aaggaacagg aaaagtgaac gttgctgaat tgtttgaaca acctgatgta cgccaaattc
    12481 cacgtgaaga tgtcgctaca gtcttgtatg aagtggctac aaatgcaaaa catcgtggta
    12541 aagaattcca agtgttaaca gggaacaacg atatttcaga ggctttatcg tctctttaaa
    12601 gtaacgatgg acacatcaat caagataact agatacgtga gaaggcttaa aaaataaaag
    12661 tcttctcacg tatctttttt gatgtctcct accttgtcgt tatataagtg atatacctca
    12721 tgttgccagt tcgtcctaaa aaagcaaagt attccgataa caaaaataaa aacctcaagt
    12781 caaattataa ttttaaataa aataaggttc agttgtaaat ttagttgttg acaaagtatt
    12841 cagaaaaata taataattaa gtgaataaga attcaactga aggaggaact tgaatgaaga
    12901 agacttggcg atatgcatgg gtattattgt tgtgtgtcac tcttgtttta tcagcatgtg
    12961 gaaaaagcag ctcgcaaacc tcgagcaatg aaaataacaa aactgaaaaa agtaatgcga
    13021 aaggtggtac tttaaatgtt ggacttactg caccaccaga gggcaacttc caagatgttt
    13081 ttgcaagttc gacatcagat tcagacgttg tagcattttt taacgatggt ttaacagaat
    13141 cagatgagca tctgaatatc aaaccgaaaa ttttgtcttg ggaaaaaagt aaggaagatg
    13201 atttaaagta tacatttaaa gtgaaaaaag ggattaaatg gcaagatggc aatccattta
    13261 caattaatga ctggattttc actttagaga caatagccga tcctgattat acagggccac
    13321 gatatagtgg tgcagcagtc attaaagggg cagaagaaaa gcataagggt aaagccaaaa
    13381 caattagcgg tctcaaaaag attgatgatt acacagtaga gttgactttt aaagcagcta
    13441 aagcgaataa cttaatggcg ttatggacgt catctgtcat cagtgaaaaa gtctttaaag
    13501 atattccggt aaaagacatg gcgaaatctg atgctgtacg taagcatccg attggtatcg
    13561 gaccattcat cgtgaagaac attgttgatg gagaatcagt agaacttgtg aaaaataaag
    13621 attattggca aggcgaacct aatatcgaca aagtaaactt acgtgtggtt gaacaaacgg
    13681 caatggccca agcacttgaa aaaggtgaca ttgatatggc tgatgtaaca ggcccaattg
    13741 ctaaagaaat taaagatcat aaagctgaaa acgtaaaaat attagagtca ccttcaactt
    13801 cttatgcaat tatcggtttt gtattaaatg attatgataa aaaagagatg aagattggaa
    13861 aagagcgtcc taaatatcaa gataagcgac tgcgtaaagc aatggcatat gcaattaatc
    13921 gtaaagaatg gattgatgca tttttctatg gatatgcgaa accattatac ggtttgattc
    13981 cttcagaaca ttggagtgga gcaaaaaaag gtgaagtaac agagtacgat tataatgtag
    14041 aaaaagcgaa aaaattactc gatgaagcag gatataaaga taaagatggt gatggattcc
    14101 gtgaagaccc taatggtaag ccgtttgtca tcaacttaaa acattattct ggttctaacc
    14161 ctacttttga gccacgtaca gccgcactga aagggtattg ggaaaaagta ggactgaaaa
    14221 cgaaagtcga aatggaagag tttggtaaat ataataatga tttagaaaat gcatcaagtg
    14281 atatggaagt gtatttccgt agttggcaac aaggttcaga ccctgatcca tcagatttgt
    14341 acaagtcgac agccttatgg aatgaatcac gctacaataa cccgaaagcc gataaactat
    14401 tagaagaagc tgtggacagt aaaattgtag gtgatgataa cgataaacgt cgtaaaaaat
    14461 acatcgaatg gcaaaaattg atgactgacg atctacctgt cattccaatt actgagttta
    14521 tcaatacaac agctgtcagc aataaagtga aaaattatga agtatctttg aaaggggcta
    14581 acccaatgta tcaatggtcg gttgaagaga aaaaataata gcacataaat ggagaaaggg
    14641 aatgatgaca cactgtctct tccctttttc tatatttact taaaatggat tgtcattaat
    14701 aacgacttaa aaatgaatga catgtggtta aagaaagggg cgtttatgaa aatgggtcag
    14761 ctattagaga tcaacaactt aactacaaca tttgatattg aaggtcagcc ttatgcagcg
    14821 atttccaata ttgatttaac ggtcaataaa ggtgaagtga tggggattgt aggggaatca
    14881 ggttcaggga aatccgtcct tagtttgtcg atattaaaac tattgccaga aaaaatttca
    14941 aatatcgcat ctggagaagt gatttacgaa ggcaaacgta ttgatcagta cgatgtagaa
    15001 caaatgaatc aaatgagagg aaaagagatt gcgatgattt tccaagagcc gatgacatca
    15061 ctcaatccgg tgtttacgat tggtaatcaa ttgatggaaa tgctaatgct ccatttgaaa
    15121 ttgtcaaaat ctgaagcaaa agcgaaagta atctcactat taaaacaagt cggtattcca
    15181 cgtgctgaaa aagtcgttga cgaatatccg catcaactgt caggtggaat gcgtcaacgt
    15241 gtcatgattg cgatggcgat ttcatgttca cctcagttgt tgattgctga cgaaccaacg
    15301 actgcacttg atgtcactgt tcaagcacaa attctcgact tgttgaaacg tattcaagag
    15361 gatacccaaa tgagcgtcat ttttatttca catgatttag gagtgatatc tgaaatttgt
    15421 gaccgtgtcg ctgttatgta tgcgggtgaa gtggttgaga ctgcaagtgt tgaagatatt
    15481 ttcagtcaac cgatgcatcc ttacacacaa ttactgttaa aagccattcc acgccttgat
    15541 gtgaaacaag agaaattaga gacgattcgt ggttcagtac cgagtttaga tgagctgccg
    15601 aaagttggtt gtcgttttgc gaatcgctgt ccacacgcga tggcgatttg tacgttgaaa
    15661 gatattgaac cttatcaatt cgagcgggaa catcaagtga aatgccattt atacacacaa
    15721 gatacggcat tgaaggaggc gaacgagtca tgagtgaatc atatgtgtta gaagtgaaaa
    15781 atttaaaaca atattatccg attaaggcag gagtcttcca aagaaaagta ggcgaagtga
    15841 aagcggtgga taatatttcc tttaagatta aaaagggaca aacggttggt cttgtaggtg
    15901 aatcaggctg tggtaagtca tcagcaggac gtacgatttt atgtttacaa aaagcgacag
    15961 agggcgaaat cttattttgt gggcaagatt taacaaaatt aaaaggtaaa gctttaagag
    16021 aagcccgtaa aggttttcaa atggtgttcc aagatccgta tgcgtcattg aatccgatgc
    16081 aaatggtggg cgatattgtc ggtgaaccga ttcgtaatta ttatcataaa aagcaacgtg
    16141 acattgaaga tgaagtgaaa gaccttttga agcgtgttgg acttaacgaa gcggattatt
    16201 acaagtatgc acatgagttt tcaggcggtc aacgccaacg tgttggtatt gcacgtgcct
    16261 tagcgctcaa accaagactg attattgcgg atgagccagt cagtgcgtta gatgtatctg
    16321 tacaatcaca agtgttgaat attatggatg aactacaaga agaaatgggg ttaagttact
    16381 tatttattgc acatgatttg agcgttgtaa aacatgtgag tgactatatt tgcgtgatgt
    16441 atttagggca cattttggaa caaggacctg ctgacgctat ttacgaaaat ccacaacatc
    16501 cgtatacaca atcacttatt tcagcgattc cagatattaa tccgacacag cgcaagaaac
    16561 gaattttatt ggagggtgat ttgccatctc cgagtcatcc gccagtgggt tgtccattcc
    16621 atacacgttg cccggttgct gaggcgcgat gtgcacaaca aaaaccacaa gcagtcgagg
    16681 tcggcaaaga acattatgcg gcatgcgtat tacttgaaga gggagaggtg aaactatgat
    16741 cacattaatc attcgtcgtt ttttgctgat gataccgatg ttgttattaa tgtctgtcgt
    16801 gatttttaca attgcgaaat tgcaacctgg tgatgcattt acaggcaata tggacccaaa
    16861 acttggggca aaatattatg aagagcaacg tgaaaaactc gggttgaatg atccgattcc
    16921 aatgcaatat atgaaatggg gtgctcgtgt gcttcatggt gaattagggg aatccattcg
    16981 ttacaaacgt ccagtgatgg atttaattga agagcgtatg ccaaatacga ttttgttggg
    17041 gacagtgagt ttgattatta catatatact tgcatttcct ctaggcatta tttccggtag
    17101 aaaaccatat agtttgtatg attatagtat ccaactactc aattatttga tgcttgcgat
    17161 tccatctttt gttgcgggtg tttttgcgat ttatgtattt gcttttcaat ttggtatttt
    17221 cccatattcg ggatctgtag aaatcggact tgaacccggc acgtttgaat attatgtcag
    17281 caaactgtat cacgtgattt tacctggtac ggtgcttggc ttactttcga cagcagggta
    17341 tattcaattt ttacgcaacg atatcattga aaatgctcga aaagactata tccgtacagc
    17401 acgtgctaaa ggtttatcag aatcaaaaat ctataataag catattttac gaaattcaat
    17461 tattccaatc gtgacatttt ttggtgggga cgtgttatcg gttttcggtg gcgcagtgat
    17521 tacagaaagc attttttcat ttcctggaat tggtaaatta ttgattgaat ctatctctgg
    17581 taaagactat ccattaatga tggcattgct gcttttcttt tcatttttag ggttgcttgc
    17641 gaatcttatt tcagacatca catatagtat agtagaccca agaatcaaga gtaactagga
    17701 ggggctatca tggaaaatca acaacttaaa aagagtcaat cacccttaca aattgcgcgt
    17761 aaaaagttta tgaaaaataa aactgcgatg gctgcaacta tcgtacttgg catgattgtc
    17821 atcatttcgt ttttagcacc attcattgcc cctcatgacc caaacgtcca aaatttagtg
    17881 ttaatcaagg gcgatatgtc gcttgagcat tggttaggga cggattcggg tggtcgcgat
    17941 atttttagtc gcttattata ttctggacgt gtatcactga catttgggtt gttcacgtcg
    18001 attggattaa tgttgatagg tattgttatc gggatgattt cgggatatta tggcggctgg
    18061 gtggatacgg tactcatgcg ttttacagag tttgtcatgt tatttccatt tatcccattt
    18121 gcggttgtat taaatgcgac attcagtcat gatattgaaa gtcaatatgg ttcagcgata
    18181 gtgttaggga ccgtgctagt cttgctttca tgggttggta ttgcgaggat ggttcgtggc
    18241 aaagtgatgc aagaaaaaga aaatgaatat ttcctcgcag cgcaatctat tgggacaccg
    18301 gtacataaaa tattattaaa acatttatta ccgaatattt taagtgtgat tattgttcaa
    18361 gcaacactgg tattcgccgt tcaaattgtg gccgaagcag gtttgagttt ccttggtttt
    18421 ggaatcagta aagaggttcc aacatggggg aatatgttaa cagatgcaca agaaggtgac
    18481 attttaagga gtaaaccgtg gatttggatg ccacctgcac tcattataac agtgacgatt
    18541 ttatgtatta attttattgg tgaaggatta aaagacgcac tgaacccaaa atctaagcgg
    18601 taaatcatta tcaaagaaaa tgagagtaca tggatgttat tgacctccgt gcactcttat
    18661 tttttatgcg atggcaggat tcacgttatt tctgagatgt attagattat ctttttaata
    18721 taaaatgttt gaaaatttta gatttttgca aaattttatt gacaaaaaat tcggataaat
    18781 acaataataa gagaaaggcg tttttaaaca tttaacaatt agggaggaaa tgggatgaaa
    18841 aaggcttatc gatatttatg gtttttatca ttaattgtag tcgttgtgct ctcagcatgt
    18901 ggaaaaaatg gaaacgagac atcaaatacg tcgaataaaa ccggcaaaag cgatgcgaaa
    18961 ggcgggacat tgacagtagt gatagcggaa ccacctgagg ggaacttcca atctattttt
    19021 actgggagta caggtgactc taatgtcatt gatttcttta atgattcact gatcgatgtc
    19081 ggtgatgatt taaagattaa accgaaaatt ttgtcatggg aaaaagacaa aaatgatgat
    19141 ttgaaatata cgttcaaagt taaaaaaggg attcagtggc aagacggtaa tccatttaca
    19201 atcaatgact gggtttttac tttagagacg ctagcagatc ctgactacga tggtccgcgt
    19261 tatagcggtg tcgcggtcat tcaaggtgcg gaagaaaaac gtaatggcca agctgatcgt
    19321 attagtggga ttaagaaaat tgattattac acagcagaaa tcacatttaa agaacataag
    19381 gcgaataatt tattagagct gtggacatcg gcgccaatta gcgaaaaagt gtttaaagat
    19441 attccagtta aagatatggc gaaatcagac gccgtacgta aaaatccaat cggtatcgga
    19501 ccttataaag tgaagcgtat tgtcgatggc gaatcagtgg aactcgtcaa aaataaagac
    19561 tactggcgcg gggaaccgaa tatcgacaac atcaatttgc gcgtcgtgga acaaacatcg
    19621 atgacacaag cgttagaaaa tggcgatatt gatatggcaa caattacagc gccaatcgcg
    19681 aaagaaatta aagatagtgg tagcgaaaac ttacaattgt tacaagcacc atcaacatct
    19741 tatgcgatcg tcggattcgt gctaaatgat tacgataaaa aagcgcaaaa aatcggtaaa
    19801 gaaagaccga aatatcaaga taaaaaatta cgtcaagcaa tggcttacgc aattaatcga
    19861 aaagagtgga ttgatgcatt ttactacggc tacggtaaac cacttaacgg tttaatccct
    19921 tctgcacatt ggagtggtgc gaaagaaggc gatgttaaag aatataaata tgacgtggat
    19981 aaagcgaaac aattattaga cgaagggggt tataaagata aagatggtga cggtttccgt
    20041 gaagatcctc aaggtaaacc attcgtcgtg aatctgaagc actatgctgg ctctaaccca
    20101 accttcgaac cacgtacagc agcactcaaa ggttactggg aaaaagtagg ccttaaaacg
    20161 aaagtcgaaa tggaagaatt cggtaaatat agcagtgatt tagaaaagtc atcgaaagat
    20221 atggaagtgt acttcagaac gtggcaacaa gggtcagacc cggatccttc tgagttatac
    20281 agatcaacgg cactttggaa tgaatcacga tacaataatc cgaaagccga taagatttta
    20341 gatgaagccg tcgatacaaa agtagtgggc gacgacaatg acaaacgtaa agaaaaatat
    20401 ttagaatggc aaaaaataat ggctgaagat gtacctgtca ttccgattgt agagttagaa
    20461 gatgtgactg cagtgagcag tagagtgaaa aactttgaag tatcactgaa aggttctaac
    20521 ccgatttatg aatggtcagt tgaagacaag aaataataaa tggtttagaa gagggatacg
    20581 tgacggcgaa cgtccgtccc cttttcttat ataaagaaag agattcattt ttatttttga
    20641 tacgggtata ggggtgaaaa tatgaatgag agcaaattat tagaagttaa aaatttgtct
    20701 accgcatttg aaatagaggg acaacagtac gatgcgattt ctaatattga tttagaaatt
    20761 aacaaaggag aaattttagg tattgtagga gaatcaggct ctggcaaatc agtgttaagt
    20821 ttatccattt tgaatttgtt gcctgagaag attgcgtcga tccgttcagg tgaagtccgc
    20881 tataaaggtc agcgcattga taatatggcg cacgaagcat tcaacaaagt acggggtaac
    20941 gaagtggcga tgattttcca agagccaatg acctcactca atcctgtatt tacgataggc
    21001 aatcagttaa tggaaatgat tatgttgcat ttaaagctat ccaaaagtga ggcaagggct
    21061 aaggcgattc aattgctcca agatgtgggg attccacgtg cgaataaagt ggtcgatgaa
    21121 tatccgcatc aattatcagg tgggatgcgt caacgggtaa tgattgcgat ggcgatttca
    21181 tgtgcaccac atctgcttat tgctgatgaa ccgacaaccg cactcgatgt aacggttcaa
    21241 gcacaaattt tagcattgtt aaaacggata caaacagaaa cgcaaatggg tgtcattttc
    21301 atttcacatg atttaggtgt catttcagag ctatgcgacc gtgtagcagt catgtatgcg
    21361 ggaaaaattg tagaactcgc acctgtagaa gagattttta cacatcctaa acatccttat
    21421 acacagttgt tattaaaggc gataccgcgg ttagatgtgc aacaagagac acttgagacg
    21481 atcaaaggtt ctgtacctag tttagttcat ttacctcaac aaggatgtcg ttttgtcaat
    21541 cgctgtccac atgcgatggc gatgtgtcag acgcaagatg tcagtggcat tcaagtggca
    21601 gatgcgcatc acgtgttttg tcatttatat caaaatgaaa cacaactgaa gggggtaggg
    21661 caacatgact gattacattt tagaagtgaa tgatttaaaa caatattatc cgattaaagg
    21721 tggcgtgttt caacgtaaaa ttggcgaagt gaaagctgta gacggcattt cttttgtgat
    21781 tgaacctggt caaactgttg gattagtagg tgagtcaggt tgtgggaaat catcggctgg
    21841 acgtacgatt ttacagttac agcaagccca ttcaggagag attaaatttt gtgggcaaga
    21901 catcacaaaa ttaagaagac gtgcattaag agaagcccgt aaaggttttc aaatggtgtt
    21961 ccaagatccg tatgcgtcat tgaatccgat gcaaatggtg ggcgatattg tcggtgaacc
    22021 gattcgtaat tattatcata aaaagcaacg tgacattgaa gatgaagtga aagacctttt
    22081 gaagcgtgtt ggacttaacg aagcggatta ttacaagtat gcacatgagt tttcaggcgg
    22141 tcaacgccaa cgtgttggta ttgcacgtgc cttagcgctc aaaccaagac tgattattgc
    22201 cgatgaacca gtcagtgcgt tagacgtttc cgtacagtct caagtgctca atattatggc
    22261 agagttacaa gaagaatttg gactcagtta tttgtttatc gcccatgatt taagtgtcgt
    22321 taagcatgtc agtgactata tttgtgtgat gtatttaggg catattttgg aacaagggcc
    22381 tgctgaagca atttatgaaa acccgagtca cccctatacg aaagcactca tttcagcaat
    22441 cccagaaatt gacccacgtc agcgtaagga acgtatttta ctggaaggtg atttaccgtc
    22501 gccaagtgat ccgccttctg gatgtccatt tcatacgcga tgtccggtag ctgaggcgcg
    22561 atgtgcagaa gtgaagccgc catcagtgga agtgagtgct aatcattatg cagcatgtgt
    22621 gttgttagaa aatgggggtg tcgcacaatg acaacattaa tcatcagacg tattttatta
    22681 atgattccga tgctcatttt aatgtaagtc gtcatcttta ccatttctaa attacaaccc
    22741 ggtgacgcat tttcaggcaa tatggatcca aaagctggcg cgaaatatta cgagcaagaa
    22801 cgtgaacgct taggcttaaa cgacccactc cctgtgcaat atatgaaatg gggcgaacgt
    22861 gtcctccatg gagattttgg cgattctatt cgctataaac gtccagtgat agatttagtg
    22921 aaagaacgta tgccgaatac cattttgtta ggggtcacaa gtttagtcat tacatatctc
    22981 attgcatttc cgctcggtat actctcaggg cgcaagccgt atagtttata cgattacagc
    23041 attcaattct taaattattt gatgctcgcc atcccgtcat tcgttgcagg ggtatttgct
    23101 atttatattt ttgcgtttca acttgggctc tttccgtttt caggttccgt tgcgctcggt
    23161 gtcgaacctg gttcagcggc gtattatata agtaagattt atcatacgat tttgcctggg
    23221 acagtgctcg gtttattatc aacagcgagt tatgttcaat ttttaagaaa tgatataatc
    23281 gaaaacgcgc gtaaagatta tattcgtacc gcacgtgcaa aaggtttatc agagtctatg
    23341 gtatataaca aacatatttt aagaaactcg attattccga ttgtgacatt ttttggtgca
    23401 gatgtattgt ctgtatttgg tggtgcggtt attacagaaa cgattttttc atatccaggt
    23461 atcggaaagc tactcattga tgcaatcagt ggtaaagatt atccattaat gatggcactg
    23521 ttactatttt tctcattttt aggattactc gctaacttaa tttcagatat tacgtatagc
    23581 atagtcgatc cgagaattaa gagtaattag gggggataca gatggataag ttgaaaaaag
    23641 caaaaagtaa atcaccactc acaatagcgc gcaagaaatt tcttaaaaac aaaccggcaa
    23701 tgatagcgac tgtggtactt ggtctcatcg ccataatttc atttttagca ccactgcttg
    23761 caccttatga tccgaactta caaaatttag tgttgattaa gggggagatg tcagcagaac
    23821 actggctcgg tacagattct ggagggcgag atattttaag ccgtttgttg tatgcggggc
    23881 gtgtgtcgtt actattcgga ttttttactt ctattggact tatgacgatt ggcgtattga
    23941 ttggaatgat ttctggctat tacggtggct gggtggatac cgtgctcatg cgttttacag
    24001 agtttgtcat gttattcccg tttatcccat ttgcggtcgt gttgaatgcg acgttcagtg
    24061 gtaaaatcga aaatcaatac ggctcagcca ttgtattagg tttggtgctc atcgccttat
    24121 cttgggtcgg tgtcgcaagg atcgttcgcg gtaaagtgat gcaagagaaa gagaatgaat
    24181 atttcttggc cgcgcaatca atcggaacgc ctgtgtataa aattttattt aagcatttat
    24241 taccgaatat tttaagtgtg attattgtac aagcgacact cgtatttgcc gtacaaatcg
    24301 ttgccgaagc aggactcagt ttcctcggat ttgggattag taaaagtgtg ccgacttggg
    24361 gaaatatgtt aacagatgca caagaaggcg acattttaag gagtaagcca tggatttgga
    24421 tgcctcccgc actcattatt acagtgacga ttttatgtat taactttatt ggtgagggat
    24481 taaaagacgc actgaaccca aaatcaagaa ggtaaaatgg acaggatttc acttctataa
    24541 tattcaggaa taaaaacaat agtttacgta cgtcagtagg tggaaagatt tgactgtaaa
    24601 tgattgaaaa tgttttcgat aatgtaagaa gttgacgcca gagagaacat gcaccagaag
    24661 aatttgagaa tattatgaaa aaacgagcaa aaatgataaa aatgtgatag actttgtgca
    24721 ataactaaaa ttgtaaaaag taaatgatga tttctagttg aaatagtgtg ctgaacatga
    24781 atttgtatta aaagtcagga cgctactgtt aggaacaaag gggatgaggt cgatgttgaa
    24841 aaaattgatg ctactatttt ttgcaatggt catttcaaca accattgcag aaacgtttct
    24901 gattgctggt acatggcaat atttgttgat gcaatctcta tcactcgcat ttatcatatt
    24961 ctttatttat cattttgtcg tttttcagtt acaagaaaag cggcaagaaa aacgttatca
    25021 agaccgtcaa tggatcgtta ataaagaaca tgaagatgaa aatgtaaaga aacgtttagt
    25081 tcgtaaataa cttgaatcat aaaatggttg aggagacata aaaatttttg atgctattga
    25141 tgcaatattt tgtgtgattt gccctcctta tgatttgtga tttttattgc cctcatgcct
    25201 tcgctttcca aggggcttgc cttgcaactc aattcggttt ccttcaagtg aacagttcaa
    25261 tcaagtcaaa ttgagttgag gcgaggcgcc taggaacgtg agtccaaggt agcaattcat
    25321 tgtgtaaact aagaaaagga tcatgcaagt gtaccaatcc gaaatgtcgt gtacacaaca
    25381 acttgaaacg ttcaccaaca tcatcgacta ttcatatcaa aaagctcgaa gttaagacaa
    25441 cagttgtcat ctcacttcga gcttttttcc taatattatg agaacacttc ggatcgtttg
    25501 gaatcaccaa agatttttgc tttaatcgct tcacctgttg gcgtaccagc gagcccccct
    25561 aaacctgttt cacgtaaaga tgcaggaagg ttacgaccca ctttatccat agcctcaatc
    25621 acctcatcta ctggaatacg gctttccaca cctgcaagtg caagatctgc tgaaatcaat
    25681 ccattgccgg aaccaattgc attccgcatc acacaaggaa tttctactaa ccctgcgaca
    25741 gggtcacaca ctaaaccaag caagttgcta atactaattg caagtgcatg tccagcttgt
    25801 tctggtgtac caccgaatgt ttgtacagca gcagcggcag ccattgcaga tgctgaaccc
    25861 acttctgctt gacagcctcc tgttgcacca gcgaccgaag cattgttagc aatcaccata
    25921 ccgcatatcg aggctgaaaa tagaaattcg agcatttggt cattcgttaa gtcatgtgat
    25981 tgctctagtt taaagagtat tcctggaatg gtgcctgaag aaccagcagt cggtgtcgca
    26041 caaataatgc ccattgctgc gttgacttca ttagtggcaa ccgctccttc aacagctgac
    26101 atcatatcat atccagaaag ggctttattg tgttggttat acttgtggat tttaatcgcg
    26161 tcctgcccgg tataacctgt tacactttta accccttccc ctgtcgtacc tttttgaact
    26221 gcttcacgca ttgtgtctag gttttgttgc atcatgtcca tgactgcttc gcgcgtcata
    26281 ccacgtgttt ccatttcatg tttaatcata atttctgaaa aagttgtgtt attttcagtc
    26341 gcatagtcga ttaattcttt cattgtatca aacatgagag tccctccaat ttaatctata
    26401 tatgaaaagt ttaaaaacgc atatttttct ttgattgatt caagtagttc gcttttaatt
    26461 ggtttattca aatgtaaggc aagtaaacaa tggccttttg tcatcgtttt aatctcttca
    26521 ttgatgtcga cttcatgctc gattaaatcg ttaattaaat gattgacttc tgcaatttta
    26581 cattccccat caatgacaag aatagggggt gtgtgtgcca tcagaataca catttggtta
    26641 acgtgaatac ttttcacttt gaatgcacca ccgccaattg aaatgccatt caactcgacg
    26701 tgacgatcac cgtgatcgat ttcgatgact gcacagttcg ggtgttcacc taaactggaa
    26761 cctgattttt cgataaattc aaagtcaatg ccttcacttc ttgcaatttt tgtcgatgtt
    26821 ttaatgcgag aatcgaatgt actaaaacct aataagccac cgataatcgc taaatccgtg
    26881 ccgtgacctt tatgcgtttc tgcaaaagat tcgtaataat tcacaacgat tttctcaggt
    26941 gtatcgccaa ggacagcacg agcggcctga ccaattttca ctgcacctgc agtatgtgaa
    27001 cttgatggcc ccatcatcac tggaccaata atatcaaaag cgctttgata atcttttgta
    27061 cgtgccataa ttcatccgct ccttaatttg tttgttgatt cacatgaggc acttgaatgt
    27121 caagcgttgg tcgtttctta ctgatgaatg tgccaatgaa aaagctcata ataatactaa
    27181 tgattgctac aacgacaatt gtaatcacgg taggcaccac ttcattaaag cctagcgcta
    27241 caatcggacc ggcaataggt gtagccatgc ctggttgatt cacaacgata cccatgtatg
    27301 tgataaacaa gccattgacc attcctacca ctgcatttgt accatacagc tggattggat
    27361 attttgcgat cgtgtcgatt tgtgttaatg gttcgacagc aacggcaaag gcttttcctg
    27421 cattgccgat tctaagtttt ctaaacatca taaagttgac aaatgagcta cccatacaac
    27481 cgagcgcacc aatcgccatt ggaatacccg taagtcctaa taagcttgtg aaaaccattg
    27541 aacttaacgg tgtcatacct acaacgggca caatcgcacc gataacaagt gcaagagcgt
    27601 acggattatt atcacctaca gctgtgatgg cagtaccgat ttgtttcaat acggcagtga
    27661 cactaggtga tacgatagat gcaataccat atgcaatggc aggagataat aagatcacca
    27721 cgatcaggtc taatccttca ggaacatatt tttcaagtgc tttaataccg aaagcaacga
    27781 aatatgccgc aataaaagca ggtaagagtt taaaatcaaa tagaacgagt cctgttaaca
    27841 cagcgaatac aggattaata ccgaacttta aacaagtgag aatgcccact gcaacaccac
    27901 ttaaacttcc tgcaacttcc cctaatttaa taaaatattc tgagtgaaac acgccaccga
    27961 ttgcgtattt taagaatgct tccggtaaaa atgaagcaca ggcagcgcct gataaagctt
    28021 gtaaactgac tttaccattc ggggcaaatt ttaagaataa agtcattgca agtaaaacaa
    28081 cgagtaatgt cccgattccc aaaataaaat ccatatgagt tccttctctc ttttattttt
    28141 atgtttttaa ttagatagct atcccaaaca accatcattc taagggcttc atttcgctta
    28201 tgcaag
//
LOCUS       DANHPA010000019        27630 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.019, whole genome shotgun sequence.
ACCESSION   DANHPA010000019 DANHPA010000000
VERSION     DANHPA010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 27630)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27630)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27630
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.019"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(353..1213)
                     /locus_tag="PTC28_000679"
     CDS             complement(353..1213)
                     /locus_tag="PTC28_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF368 domain-containing protein"
                     /protein_id="HDK5715995.1"
                     /translation="MSKFKLSNIPRGFAMGVSDLIPGVSGGTIALLLGIYDDFIQSVS
                     GVFSKNFKKSILFLLPIVIGMGLAIGILSSVINYLLAKHPVPTMFFFFGLILGIIPFL
                     LRISRYRQTYQIQHWLVMLVCVIILASMAFFKGDSNHAVPSHIDVSGPMLIKYLIAGI
                     CASSAMLLPGISGSFVLLLFGVYSTVTFSISEAVRFNFEGLPVILLVGVGVVIGFVIA
                     SKIITFLLEHYTYLTYAAILGLVIGSLFSVFPGLPTSGLSWLVSIVTLIIGFVISYVL
                     GLFTAEVETK"
     gene            1511..2281
                     /gene="sufC"
                     /locus_tag="PTC28_000680"
     CDS             1511..2281
                     /gene="sufC"
                     /locus_tag="PTC28_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HDK5715996.1"
                     /translation="MPSTLEIKDLHVSIDDKEILKGVNLTINTGEIHAIMGPNGTGKS
                     TLSSAIMGHPSYEVTQGEVLLDGVNVLELEVDERAKAGLFLAMQYPSEITGVTNADFM
                     RSAINAQREEGNEINLMQFIKKLDKQMDFLDMDKDMAQRYLNEGFSGGEKKRNEILQL
                     MMLQPKFAILDEIDSGLDIDALKVVSKGINEMRGEEFGSLIITHYQRLLNYITPDHVH
                     VMYNGIVVKSGGAELAKRLEEEGYEWVKEEYESVVANQ"
     gene            2303..3610
                     /gene="sufD"
                     /locus_tag="PTC28_000681"
     CDS             2303..3610
                     /gene="sufD"
                     /locus_tag="PTC28_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HDK5715997.1"
                     /translation="MTTETLNISEAQLVDYSQAHNEPSWMTELRKKALQQVESLEMPK
                     PDKTKLTKWDFDSFKQHETEGAVYNDLKELPKEIDRIINVENTENLVIQHNNTLAYTK
                     VNEKAQQDGVIIEHIQEALVNHSDLVEKYFMKDAVTVDEHRLTALHTALMNGGIFVYV
                     PKNVVVEHPIQYVVLHDDDNASFFNHVLLVTEESAEVTYVENYLSTASGEGNQLNIIS
                     EVVAGANSNISYGSVDFLDQGFTGHIIRRGVTAADASIRWSLGLMNEGDQIIDNTTNL
                     IGDRSSSELKSVVVGRGTQTINLTSRIVQYGKETDGYILKHGVMKENASSIFNGIGHI
                     KHGGSGSSANQESRVLMLSENARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMS
                     RGISQSESERLVIHGFLDPVVRELPIEDVQRQLREVIELKVGK"
     gene            3639..4880
                     /locus_tag="PTC28_000682"
     CDS             3639..4880
                     /locus_tag="PTC28_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020359689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HDK5715998.1"
                     /translation="MADTKLNVEAIIKDFPILEQQVNGKRLAYLDSTATSQKPKQVID
                     ALSDYYERYNSNVHRGVHTLGSLATDGYEGARETVRRFIHAKYFEEIIFTRGTTAAIN
                     MIAHSYGDANVGEGDEIVVTQMEHHANLVPWQQLAKRQGATLKFIPMAEDGTITLEAV
                     RETVSERTKIVAIAHVSNVLGTINDIKAIAEIAHEHGAIISVDGAQSVPHMKVDVQDL
                     NVDFYSFSGHKMLGPTGIGVLYGKREHLNQMEPTEFGGDMIDFVDLYDSTWTDLPTKF
                     EAGTPLIAQAIGLQAAIEYIESIGFDAIHEHEQALTTYAYEQMSQIEGIDIYGPSKDK
                     RAGIITFNLKDVHPHDVATALDTEGVAVRAGHHCAQPLMKWLNVSSTARASFYIYNTK
                     EDIDQLVEGLKQTKEFFSYEF"
     gene            4870..5319
                     /locus_tag="PTC28_000683"
     CDS             4870..5319
                     /locus_tag="PTC28_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system NifU family Fe-S cluster assembly
                     protein"
                     /protein_id="HDK5715999.1"
                     /translation="MNFNNLDQLYRSVIMDHYKNPRNKGVIEDGTMTVDMNNPTCGDR
                     IRLTFDIAEGVIRDAKFEGEGCSISMSSASMMTEAIKGHSLKEAMQMSQEFTKMMLGE
                     DYEITEEMGDIEALQGVSQFPARIKCATLAWKALEKGTVEKEGKSEE"
     gene            5417..6814
                     /gene="sufB"
                     /locus_tag="PTC28_000684"
     CDS             5417..6814
                     /gene="sufB"
                     /locus_tag="PTC28_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019469760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HDK5716000.1"
                     /translation="MAKKAPDVGDYKYGFHDEDVSIFRSERGLTENIVREISRMKNEP
                     EWMLDFRLKSLKQFYKMPMPQWGGDLSELDFDDITYYVKPSERSERSWDEVPEEIKRT
                     FDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEKGIIFKDTDTALKENEELFKEY
                     FASVIPAADNKFAALNSAVWSGGSFIYVPKNVKLDTPLQAYFRINSENMGQFERTLII
                     ADEGASVNYVEGCTAPVYTTNSLHSAVVEIIVHKDAHVRYTTIQNWANNVYNLVTKRT
                     FVHENGNMEWVDGNLGSKLTMKYPACVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHK
                     APNTSSTIVSKSISKDGGKVVYRGIVHFGRKAKGARSNIECDTLILDNQSTSDTIPYN
                     EIFNDHISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAV
                     EMNRLIKFEMEGSIG"
     gene            6960..7244
                     /locus_tag="PTC28_000685"
     CDS             6960..7244
                     /locus_tag="PTC28_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease"
                     /protein_id="HDK5716001.1"
                     /translation="MKKLMKINTSHHQFGYDEKPTGLVLGELVHFYDAFNREGYTMDI
                     YINESDTPIDSVSLNKLMLDRATKTYYEGAHFMALLKKCATYYSRKSKNV"
     gene            7534..8532
                     /locus_tag="PTC28_000686"
     CDS             7534..8532
                     /locus_tag="PTC28_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF21 domain-containing protein"
                     /protein_id="HDK5716002.1"
                     /translation="MIIAIILLIIVSCFFSGSETALTAANKVKLKSEADQNHQRSAKL
                     LKLLEKPSEFITTILIGNNIANILLPTLVTILAVDIGLSVGIASAVLTVVIIVFAEVI
                     PKSVAATFPDPIARFVFPVIRLCVIVFKPITVVLNALTDGINRILSRGQENQGMSKEE
                     VRTMVSIAGTEGAFNEMERNRIQGVMDFDRLKLNDVSNTPRVNVTSLSVEDTYDEVYD
                     IVMNHPYTRYPVYEGDIDNVVGVFHSKYLLAWSKTPDKAVTDFCSEPLFVYEHNRAEW
                     VLRKMTVTRKHMAIVLDEYGGTDAIVTHEDLIEEMLGMEIEDEMDREESDKLKQIR"
     gene            8612..9564
                     /locus_tag="PTC28_000687"
                     /pseudo
     CDS             8612..9564
                     /locus_tag="PTC28_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166997.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
     gene            complement(9597..10304)
                     /locus_tag="PTC28_000688"
     CDS             complement(9597..10304)
                     /locus_tag="PTC28_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDK5716003.1"
                     /translation="MVKQISYGAHEDQHYDVYDNEQKTSQAWIVLIHGGYWRQKYSKA
                     MMDLMIDTLIEAGYAVVNVEYRRGTAHPWPIPSDDVAAAIQHFKTSTYQPRQLVGIGH
                     SVGGQLVLLNAKLFDQIVALAPVTDVLYTLHQHLGQNAAAEYFDSSSTHTMRAASPLM
                     QAPIDVDTLIVHGFNDTSVHMDTTLSYVQENYKHGQYLTLYALPYLDHLDCINPGATH
                     LNMLLEWLAHRTAGDTV"
     gene            10428..11276
                     /locus_tag="PTC28_000689"
     CDS             10428..11276
                     /locus_tag="PTC28_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002464385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HDK5716004.1"
                     /translation="MIEIGLTGWGDHDTLYEDLQRKADKLQTYASHFPVVELDASYYA
                     IQPERNIVKWISETPQRFKFVVKIHQALTLHADYHDYADTIESLFHDFRRMLQPLVEA
                     DRLAMVLVQFPPWFDCNAKNIKYIRYVRAQLEQVPVCIEFRHQSWFQGEMKEHTLQFL
                     TDNQLIHSVCDEPQVGEGSVPLVNRITHQTALVRLHGRNKYGWTKKDMTDQEWRDVRY
                     LYNYNAEELQQLADKVTLLNQKAQHVYVVFNNNSGGHAAANAKYFQKLLGIDYEGLAP
                     QQLKLF"
     gene            11285..12115
                     /locus_tag="PTC28_000690"
     CDS             11285..12115
                     /locus_tag="PTC28_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002956137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDK5716005.1"
                     /translation="MTLSIIILILVGFLSAIIGSLVGIGGGIIIVPTLIYFGVTLNIL
                     GGITPQTAIGTSSIILIATGLSSTVGYLKQKQVDVKNGIIFTIGIIPGALIGAYLSQY
                     LTLHSFNLYFGMFLILISVLLMVRHRIPPIKVFQQERYMKSFTDAHGEHYRYGVIPTI
                     AIIASFIIGLTAGLFGIGGGALMTPLMLLVFRFPPHIAVGTSMMMIFFSSVTGSIGHI
                     MLGHVLWGYSLILIISSWVGAQLGVRLNKTVKSDTVVLILRLVMLGLGIYLILQSFFN
                     "
     gene            12132..13451
                     /locus_tag="PTC28_000691"
     CDS             12132..13451
                     /locus_tag="PTC28_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HDK5716006.1"
                     /translation="MRLTIYHTNDIHSHLHAYSRITAYLTKARAQLTHPSRYVDIGDH
                     VDLSLPVTEGTLGKRNIELLNEAGCDVATIGNNEGMTISHEALNALYDEAQFKLTCTN
                     VLDESGQLPHNFLTSYIEQIEGVRVMYVAATAPFTPFYRALDWVVTDPLDAIQQEIAA
                     HKGEYDVLIVLSHVGIFFDEKLCETLPEIDVIFGAHTHHYFEDGEIQNGVLMAAAGKY
                     GQYLGEVTLEIENGKVIEKTAMLHPLEQLPEVETNFEAEGKALLNAPVVDTPITLQRA
                     MNHITKASYLLAESVHEFTEADCTIINAGLIVKGYTAQRLTEYDIHQMLPHPINVVRI
                     RLTGAELKEVLLKARAQEYMYDYAQGLGFRGDIFGGYILYEAGYIESSERYFVNGKEI
                     DDEATYILGTVDMYTFGRYFPTLKGGHIQYLMPEFLRDIFKEKLLTV"
     gene            13537..14454
                     /gene="lipA"
                     /locus_tag="PTC28_000692"
     CDS             13537..14454
                     /gene="lipA"
                     /locus_tag="PTC28_000692"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HDK5716007.1"
                     /translation="MATKNEEILRKPDWLKIKLNTNENYTGLKKMMREKGLHTVCEEA
                     KCPNIHECWGERRTATFMILGDVCTRACRFCAVKTGLPNELDLGEPERVADSVKQMNL
                     KHVVITAVARDDLKDAGSNVYAETVRKVRELNPFTTIEILPSDMGGDYEALETLMAAR
                     PDILNHNIETVRRLTPRVRARATYDRTLEFLRRSKELQPDIPTKSSIMVGLGETIEEL
                     HETMDDLHANGVDILTIGQYLQPSRKHLKVQKYYTPLEFGKLRKVAMEKGFKHCQAGP
                     LVRSSYHADEQVNEAAKAKHRLGEEQLKL"
     gene            14473..14838
                     /locus_tag="PTC28_000693"
     CDS             14473..14838
                     /locus_tag="PTC28_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016424592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1027 domain-containing protein"
                     /protein_id="HDK5716008.1"
                     /translation="MIKVGNHYFELLTSYKDGFNEDDFIARYSEILDKYDFVVGDYGY
                     DQLRLKGFYHDSYKKADFNKRFSTIQDYLYEYCNFGCAYFVVRRLSKAEVEQQLGHDA
                     PIDATDKLKDVKIQPTIQD"
     gene            complement(15467..15733)
                     /locus_tag="PTC28_000694"
     CDS             complement(15467..15733)
                     /locus_tag="PTC28_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001831957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3055 domain-containing protein"
                     /protein_id="HDK5716009.1"
                     /translation="MIDMFLYDDMEPSQIRFVGFVGEHSRYDLVLIQTDRHYGKTLVL
                     NTQTNKFGIIGTDDLEEEGYIAYILGVSEEEGDEIKAYLHEVIQ"
     gene            15834..16265
                     /locus_tag="PTC28_000695"
     CDS             15834..16265
                     /locus_tag="PTC28_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002483824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF86 domain-containing protein"
                     /protein_id="HDK5716010.1"
                     /translation="MYFVDKTQLETKLKYLKQLTEDYETVKSNHYAFERVAQMLIESS
                     VDIGNMIIDAFILRDPGNYKDVIDILELEGAISKETQHALHKTIDVRRQFVHYYDTLD
                     IAQLIPLFDQTVPFYEQFIEEVLQFLENENVPVTAFGKGAQ"
     gene            16269..17054
                     /locus_tag="PTC28_000696"
     CDS             16269..17054
                     /locus_tag="PTC28_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01457 family HAD-type hydrolase"
                     /protein_id="HDK5716011.1"
                     /translation="MKAYKGYLIDLDGTMYKGNQKIEGASEFIDYLNENQIPHLYVTN
                     NSTKAPVDVVEKLTTMAIDAKPQEVITSAMATADYIHGEKPGATVFMIGGSGLATALE
                     EAGLQLENDINVDYVVVGLDEAITYEKLTTATLAVQNGATFISTNPDPSIPKEQGFLP
                     GNGSLTSVVTVSSKQQPIFIGKPETPIMEKSLEVLQLNKDEVAMIGDLYDTDIMAGIN
                     FGIDTIHVQTGVTSKEEVMQRDVPPTYSVKDLNELREQLIKGE"
     gene            17061..18026
                     /locus_tag="PTC28_000697"
     CDS             17061..18026
                     /locus_tag="PTC28_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HDK5716012.1"
                     /translation="MEKILVTRRIPQKFVERLETLGEVEMWDHELTPMPREKFIAAVQ
                     DKTAILVTLSEKIDATLFEAAPNLKIVANMAVGFDNIDLQAAAQHEVEISNTPHVLTE
                     TTAELGFALMMATSRRIVEAEKYVQDGKWESWGPYLLAGKDIYQSKVGIYGMGEIGRA
                     FARRLKGFHADILYHNRSRNIQAEQELGAFYTSFDKLIKESDFVICTAPSTPDTQNKF
                     NKEVFKNMRKDAIFINIGRGDLVVEEDLVEAIETGEIAGCGLDVVRDEPIRTDHPLLQ
                     YPNVIVTPHIGSATVLTRDQMIQTCLLNIKDVLEGQKPRNQVKMG"
     gene            complement(18611..18853)
                     /locus_tag="PTC28_000698"
     CDS             complement(18611..18853)
                     /locus_tag="PTC28_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HDK5716013.1"
                     /translation="MPTENATMYDQVAEVIEKLRPFLLRDGGDCELVDVEDGIVKLQL
                     LGACGTCPSSTITLKAGIERALVEEVPGVVEVEQVF"
     gene            18957..19295
                     /locus_tag="PTC28_000699"
     CDS             18957..19295
                     /locus_tag="PTC28_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YuzD family protein"
                     /protein_id="HDK5716014.1"
                     /translation="MEKVSVVVYGAEVVCASCVNAPSSENTYDWLKTLLPRKYPNIDF
                     EYTYIDIMGAQDNLSDHDIQFIEQIQEDELFYPLVTMNDEYVADGYVQLKPIKRFIER
                     NFEVSAEEEK"
     gene            complement(19645..20709)
                     /locus_tag="PTC28_000700"
     CDS             complement(19645..20709)
                     /locus_tag="PTC28_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002483814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDK5716015.1"
                     /translation="MKNLVLLGGGYGNMRIMSKILPDALPNDYNMTLIDRMPYHGLKT
                     EFYALAAGSKSDKEVRVNFPQHDRTHTVYGEITDIDLDNQIISVGQTKVDYDELVIGL
                     GCEDKYHNVPGAKEYTYSIQTLHDARKTYHDISDLPTNATVGIVGAGLSGIELASALR
                     ESRSDLKIYLYDRGERILNQFPEKLSNYVKKWFDQHDVTVVPNSDIVKVEPGILYNKE
                     TKNEHDLIVWTAGIQPVEIVRNLPVDLSRSNRVMVNQYHQIPTYPNVYVVGDCANLPH
                     APSAQLAEEQADQIAMVLTTLWKGKNLPEKMPEIKIQGFLGSLGEKKGFAYLMDTTVT
                     GRLASILKSGVLWLYKYHNG"
     gene            21000..21236
                     /locus_tag="PTC28_000701"
     CDS             21000..21236
                     /locus_tag="PTC28_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002483813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YuzB family protein"
                     /protein_id="HDK5716016.1"
                     /translation="MNPIVEFCISNMARGSEVVYQTLENDPGVDVLDYGCLQNCGICS
                     SGLYALVNGDIVEGDTPDDLLQNIYKHIEETWTF"
     gene            21249..21608
                     /locus_tag="PTC28_000702"
     CDS             21249..21608
                     /locus_tag="PTC28_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HDK5716017.1"
                     /translation="MAVVNLTEAAAYEVKDMLKQNDMADGYLKVKVNGGGCTGLTYGM
                     TAEAEPGENDEVLEFFGLKVLVDKEDAPILNGTTIDFKQSLMGGGFQIDNPNAIASCG
                     CGSSFRTAQAAGSPESC"
     gene            22029..23231
                     /locus_tag="PTC28_000703"
     CDS             22029..23231
                     /locus_tag="PTC28_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002455555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDK5716018.1"
                     /translation="MAERKKVLVLGAGYAGLQTVTKLQKKLSEQDAQITLINKNDYHY
                     EATWLHEASAGTLNYEDVLYPIENVLKKHVDFVRAEVTKIDRNAKKVETTRGIFEYDI
                     LVVALGFESETFGIEGMKEHAFQIENVNTARQISRHLEDKFVNYAASKTKDDKDLAIL
                     VGGAGFTGIEFLGELTDRIPELANKYGVEQSKVKVTCVEAAPKMLPMFSDELVSHAVS
                     YLEQRGVEFKVGTPIVAANDKGFVVKINDEEQQLEANTVIWAAGVRGSQLMEKSFEGV
                     KRGRIVTKQDLTIEGYDDIFVIGDVSAFIPEGGDRPLPTTAQIAMQQGEKTASNIVNI
                     LKGAPTEDFKYSDRGTVCSLGRHDGVGIVYGREITGKKAAFMKRVIDTRAIFKIGGLG
                     LAYKKGKF"
     gene            23496..24983
                     /locus_tag="PTC28_000704"
     CDS             23496..24983
                     /locus_tag="PTC28_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase family protein"
                     /protein_id="HDK5716019.1"
                     /translation="MPSQQTETAAAIIAGVPEHLNQYFDVVKQDTAFFEALTELKAHH
                     LISSKAGEIASTGVTIENQMYRLITVGLGNLNQLKAQDYLKIWGKLFQYLQQGAIAKI
                     NLKVNTFLAKSLESETIFKLMGLQSEQAIYQFDDYKSDKKAPFHLKMVLDCDQVSDYT
                     DPIEVGQKLGRAVNRARDLSNTPPNIMTPAYLAETVEQYFKDTAVKVHIKDEHAIVQE
                     GFGLVQAVGKGSVHPPRMITLEYQGDPDHEDRVIALVGKGITYDSGGYSIKSKNGMPS
                     MKFDMSGAANVIGMVEAIRALKLKVNIVAVIAAAENMIANNAMKPDDVFTAVSGETVE
                     VPNTDAEGRLVLADATFYANQYKPEMIMDFATLTGAAVVALGEDKAAVFQHRVQPEVL
                     NQIFQTSQIYEEPVFELPITETERKNIKASDVADLTNHVNAHGKALFAAAFIMHFSGQ
                     TPHLHFDIAGPATINKATHKGPKGPTGFMIPTIVTWLKNQYGMNQ"
     gene            25121..26434
                     /locus_tag="PTC28_000705"
     CDS             25121..26434
                     /locus_tag="PTC28_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HDK5716020.1"
                     /translation="MNAVLIAVVIMIVLCLCRLNVVISLFISALIGGWIAGLPFDKTI
                     TTFTENIMDGAEVALSYALLGGFAALISYSGITDYLVRKVILSIRAEETKVSRIKVKV
                     LIIVSLLLLSIMSQNVIPVHIAFIPIVIPPLLSLFNELKIDRRLIAMIIGFGLCFPYV
                     LLPFGFGHIFHEIIQKGFEKAHHPIEFNMIWKAMLIPASGYIIGLIIAMFYYRKPRTY
                     RETAAQEEEVAVDLKPSVIIVTVVAILATFLVQMFSDSMIFGALAGVLVFFISGIYSW
                     RKLDDQFVDGIKIMAYIGVVILTANGFAGVMNATGDIEKLVTGLTTISGDNLLVSIVL
                     MYLIGLVVTLGIGSSFATIPILAALFIPFGEAMGMSTMALIALIGTASALGDSGSPAS
                     DSTLGPTAGLNVDGQHDHIRDTCIPNFVFYNIPLIIMGTIAALVL"
     gene            26458..26835
                     /locus_tag="PTC28_000706"
     CDS             26458..26835
                     /locus_tag="PTC28_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HDK5716021.1"
                     /translation="MTNLIELLEMKVEAQEDGYLKMSMPVTDKVKQPFGYLHGGASLA
                     LGETACSLGSAHLIDTSTHIPLGLEMNANHISSVREGVVYAEARILHQGSTTHVWDIH
                     IKNQAGQLISAMRGTIAIKPLKQ"
BASE COUNT         8988 a         4787 c         5781 g         8074 t
ORIGIN      
        1 tctatttatg gattgatatc cattaatggt gattaaaccg ttgaaaaata agggtgtatg
       61 taaaaaatga tgcgatcgtt ttcttgattt catcaacttg ccctcagttt cgctgtgtct
      121 gttataagat tgcccagaag gctgagactc ctgagggatc agctggtccg gaaaatccaa
      181 ttcggcttca aacaagtgtt gacttcaatc aagccgaatt tagttggagg gccagcccct
      241 aggaaaggga agccatgatg gcaatcaaaa actgaaaatc gtagggaggg taagtttaac
      301 aaaatattgc atcaatcgca tcaaaagttt ttatgtcccg ccccctttca atttattttg
      361 tttcaacttc ggcagtaaat agacctaaga cgtaactgat aacaaaaccg ataatgagtg
      421 ttacgataga aaccaaccat gagagtcctg atgtcggtag gcctgggaac actgagaaga
      481 gtgaaccgat gacaagccct aatatcgcag catatgttaa atacgtataa tgttcaagta
      541 aaaatgtaat gatcttactt gcaataacaa aaccgatgac gacaccgacg ccgactaata
      601 aaatgacagg aagcccttca aagttaaaac gaacagcttc tgaaatagaa aatgtcactg
      661 tactgtagac gccgaataat aataaaacga acgagcctga aataccgggc agtagcatcg
      721 cacttgatgc acaaatccca gctattaaat attttatcaa catcggtcct gatacatcga
      781 tgtgtgaagg tacagcatga ttactatcgc ctttgaaaaa tgccattgat gctaaaataa
      841 tgacgcagac aagcataacg agccaatgct gaatctgata tgtctgtcta tatcttgaga
      901 tgcgcaataa aaatggaata atccctagta tcagtccaaa gaaaaagaac atagtcggga
      961 caggatgctt cgctaataag taattaataa cactacttaa aataccgatt gctaagccca
     1021 taccaatcac tatcggtaat aaaaataaaa tactcttttt aaaatttttt gagaacacac
     1081 cacttacaga ttgaataaaa tcatcatata ttccgagtaa taacgcaatt gtaccgccac
     1141 ttacacctgg gattaaatca ctgacaccca ttgcgaaacc acgaggaata ttagaaagtt
     1201 taaatttcga cataattata atcctttctt ttttgtccat acatcataac atattatacc
     1261 cattttctat tagtgataat atcatcttga tttgaatgag aacagagtgc ttttaattat
     1321 caataacgtt tctaaaaaag tttgtaagaa tgattcttct acaaactgaa tatataacgc
     1381 taaacggttt atcaatccct ttatttccgt tataataagc aactagatag atttgaaaac
     1441 cttttgacgt tacattaaaa ttattataaa ctaaactatg gaatctaaca ttattttgga
     1501 gggaatatta atgccatcaa cattagaaat taaagactta catgtgtcta ttgacgataa
     1561 agagatttta aaaggtgtta acttgacaat caacacaggg gaaattcatg ccatcatggg
     1621 gccaaatggt acaggtaaat caacattatc ttcagcaatt atgggccatc catcttatga
     1681 agtgacacaa ggtgaagtgt tattagatgg agtaaatgtt ttagaattag aagttgatga
     1741 acgtgccaaa gcaggtcttt tcttagctat gcaataccca tcagaaatta cgggtgtgac
     1801 aaatgcggac tttatgcgtt cagcaattaa tgcgcaacgt gaagaaggta atgagattaa
     1861 cttaatgcag ttcattaaaa agttagacaa acaaatggat ttcttagaca tggataaaga
     1921 catggcgcaa cgttacttaa atgaaggctt ctctggtggg gagaaaaaac gtaacgaaat
     1981 tttacaatta atgatgttac aacctaaatt cgctatttta gatgaaattg actctggtct
     2041 tgatatcgac gcattaaaag ttgtatcaaa aggaatcaat gaaatgcgcg gagaggaatt
     2101 tggttcatta attatcacgc actatcaacg tttattaaac tatattacac cggaccacgt
     2161 gcacgtaatg tataacggca tcgtagtgaa atcaggtggt gctgaattag caaaacgcct
     2221 tgaagaagaa ggttatgaat gggttaaaga agaatacgaa tcagtagtgg caaaccaata
     2281 atcatcacag gaggaaataa ttatgacgac tgaaacatta aatatttctg aagcgcaact
     2341 tgttgattat tcacaagccc ataacgaacc ttcgtggatg actgaattaa gaaaaaaagc
     2401 acttcaacaa gtcgaatctt tagaaatgcc taaaccagat aaaacaaaat taacgaaatg
     2461 ggattttgac tcatttaaac agcatgaaac agaaggtgct gtatataacg atttaaaaga
     2521 attaccgaaa gaaatcgatc gtattattaa cgtcgaaaac actgaaaact tagtgattca
     2581 acacaataac acgctggcat atacaaaagt caatgaaaaa gcgcaacaag acggtgtgat
     2641 tattgaacac attcaagaag cgttagtgaa ccatagtgat ttggtagaaa aatacttcat
     2701 gaaagatgca gtgactgttg atgagcatcg tttgacagcg ttacacacgg cattaatgaa
     2761 cggaggtatt ttcgtctatg tgccgaaaaa tgttgttgtt gaacatccga ttcaatatgt
     2821 tgtgcttcat gacgatgaca atgcaagttt cttcaaccat gttttattag tgactgaaga
     2881 aagtgctgaa gtgacatacg tagaaaacta tttatcaaca gcgagtggcg aaggaaacca
     2941 attgaatatt atttcggaag tggttgctgg cgcgaactct aacatttcat atggttctgt
     3001 tgacttttta gatcaaggtt ttacaggtca tatcattcgt cgtggtgtga ctgcagcaga
     3061 tgcctctatt cgttggtcat taggtttaat gaatgaaggc gaccaaatta tcgataacac
     3121 aacaaactta attggtgacc gttcatcttc tgagcttaaa tcagttgtgg ttggacgtgg
     3181 tacacaaaca attaacttaa catctcgtat tgtgcaatac ggtaaagaaa cagacggcta
     3241 tatcttgaag catggtgtga tgaaagagaa tgcttcttca atctttaatg gtattggtca
     3301 tattaagcac ggcggttcag gttcatcagc taaccaagaa tcacgtgtgc tcatgctttc
     3361 tgaaaatgca cgtggtgatg cgaacccaat tctattaatc gatgaagacg atgtagaagc
     3421 aggacacgca gcatcagtag gtcgtgtaga tccagaacaa ctttattacc ttatgagtcg
     3481 tggtatttcg caatcagaat cagaacgtct tgttattcac ggtttcttag atccagttgt
     3541 acgtgaatta ccaattgaag atgttcaacg tcaattacgt gaagtgattg agctgaaagt
     3601 aggcaaataa tacaattcaa gaaaggtctg tgattgtagt ggccgataca aaactaaatg
     3661 tagaagcaat tattaaagac tttcccattt tagaacaaca agtcaatgga aaacgtcttg
     3721 catatttgga ttcaacagca acaagtcaaa aaccaaagca agtgattgac gccttgtcag
     3781 attactacga gcgttacaat tcgaacgtac atcgtggtgt gcatacactc ggttcgcttg
     3841 cgacagatgg ttacgaaggg gcgcgcgaaa cagtccgtcg ttttatccat gcgaaatatt
     3901 ttgaagagat tatttttact cgtggtacaa cagcagcaat taatatgatt gcgcatagtt
     3961 atggagatgc caatgtcggt gaaggtgacg aaattgttgt cacacaaatg gagcaccatg
     4021 cgaacctcgt cccttggcaa caacttgcga aacgccaagg tgcgacatta aaatttatcc
     4081 caatggcaga agatggtacg attacgttag aagctgtgcg tgagacagtt tcagaacgta
     4141 cgaaaattgt agcaatcgcg catgtttcta acgtattagg aacaattaat gatattaaag
     4201 ctattgcaga aattgcgcat gaacatggtg cgattatttc agttgatggt gcacagtctg
     4261 ttccacatat gaaagtagat gttcaagatt tgaatgttga tttttatagt tttagtggcc
     4321 ataaaatgct tggaccaaca ggaataggtg tcctttatgg aaaacgagaa cacttgaatc
     4381 aaatggagcc tactgagttc ggtggcgata tgattgattt tgtggacttg tatgacagta
     4441 cttggacaga cttaccgact aagtttgaag caggcacacc tttaatagct caagctattg
     4501 gcttacaagc agctattgaa tacattgagt ccattggctt tgatgcgatt catgaacatg
     4561 aacaagcttt aacaacgtat gcctatgaac aaatgtcaca aattgaaggc atcgacattt
     4621 acgggccgtc taaagacaaa cgtgcaggta ttattacgtt taatcttaaa gatgtacatc
     4681 cacatgacgt tgcgactgct ttggatactg aaggtgttgc agtgcgtgca ggtcaccatt
     4741 gtgcacaacc attaatgaaa tggttaaacg tttcttcaac agcgcgtgca agtttttata
     4801 tctataatac aaaagaagat atcgatcaac ttgtcgaagg attgaaacaa acgaaggagt
     4861 ttttctcata tgaattttaa taatctagac caattatatc gttcggtgat tatggatcat
     4921 tataaaaacc ctcgcaacaa aggtgtcatt gaagacggga cgatgactgt cgatatgaac
     4981 aatcccactt gtggtgaccg tatccgctta acatttgata ttgcagaggg tgtcattcgt
     5041 gatgcgaaat ttgaaggtga aggttgttcg atttcgatgt cgagcgcgtc gatgatgact
     5101 gaagcgatta aagggcatag tttaaaagaa gccatgcaaa tgagccaaga atttacgaaa
     5161 atgatgctcg gtgaagatta tgaaatcact gaggaaatgg gagatattga agcattacaa
     5221 ggtgtttctc aatttccagc ccgtattaaa tgtgccacac ttgcatggaa agcacttgaa
     5281 aagggtactg tagaaaaaga aggcaaaagt gaagaatagt cgtttgtgag aactttttac
     5341 acaacgatta cgatagagtt gaaaatgagt tgtcataagg cactcatgaa tgaattagaa
     5401 ataggagtga tgattgatgg ctaaaaaagc acctgatgta ggcgattata aatatggctt
     5461 ccatgatgaa gacgtatcga tttttagatc agaacgtggc ttaacagaaa atattgtacg
     5521 tgaaatttca agaatgaaaa acgaacctga atggatgttg gactttcgtt taaaatcgtt
     5581 aaaacagttt tataaaatgc caatgccaca atggggcggc gacttatctg aattagactt
     5641 tgacgatatt acgtattatg ttaaaccgtc agagcgttca gagcgttctt gggatgaagt
     5701 gcctgaagaa attaaacgta ctttcgataa attaggtatt ccagaagctg agcaaaaata
     5761 tttagcaggt gtatctgcac aatatgaatc agaagtggtt taccataaca tggaaaaaga
     5821 acttgaagaa aaaggtatta tcttcaaaga cacagataca gcattaaaag aaaacgaaga
     5881 acttttcaaa gaatattttg catctgtcat tccagcagct gacaacaagt tcgcagcatt
     5941 gaactcagca gtatggtcag gtggttcatt catttacgta ccgaaaaatg tgaaattgga
     6001 cacaccatta caagcgtatt tccgtattaa ctcagaaaac atgggtcaat tcgaacgtac
     6061 attaatcatt gctgacgaag gtgcatctgt aaactatgtt gaaggttgta cagcaccagt
     6121 gtacacaacg aactcattgc actcggcagt tgttgaaatc attgtacaca aagatgcgca
     6181 cgttcgttat acaacgattc aaaactgggc aaacaacgtg tataaccttg tgacaaagcg
     6241 tacattcgtt catgaaaatg gaaacatgga atgggttgac ggtaacttag gttcgaaatt
     6301 aacaatgaaa tatccagcat gtgtgttact tggtgaaggt gcaaaaggta gcacattatc
     6361 tatcgctttt gcgggtaaag gccaagttca agatgcaggt gctaaaatga ttcataaagc
     6421 accaaacaca tcttcaacaa tcgtttcaaa atctatttct aaagacggcg gtaaagtagt
     6481 ataccgcggt attgtacact ttggacgtaa agcgaagggc gcacgttcaa acatcgaatg
     6541 tgatacgcta attttagata accaatcgac atccgataca attccttaca acgaaatttt
     6601 caatgaccac atttcattag aacacgaagc gaaagtttct aaagtatctg aagagcaatt
     6661 gttctacctc atgtctcgtg gtatttctga agaagaagcg actgagatga tcgtaatggg
     6721 cttcattgaa ccatttacaa aagaattgcc aatggaatat gccgttgaaa tgaaccgtct
     6781 catcaagttc gagatggaag gtagtatcgg ataagctgag taggcatggt tgagcgattt
     6841 tgattgtcga aaactacctt tttgatacct ctttattttg attatgttca aaataaagag
     6901 gtatttattt tacacaagtt tttttatgtc gctaccttaa ttcagaaagg atagactata
     6961 tgaaaaagct tatgaagatc aatacaagtc accatcagtt tgggtatgac gagaagccga
     7021 ctgggttagt gttaggcgaa cttgttcatt tttatgacgc tttcaatcgt gaaggttaca
     7081 ccatggacat atatattaat gagagtgaca cgcctatcga ttcagtcagt ttaaacaaat
     7141 tgatgttaga tcgtgccact aaaacatatt atgaaggtgc acattttatg gcgttattaa
     7201 aaaaatgcgc aacctattac tcacgcaaat ccaaaaatgt atgaaaatca tgcaggtatt
     7261 atgtgtgatt catttgcaat ttatctatcg ttcagacaca ataatactat gattgccggt
     7321 atgtattttc ggtgtataag gtttgagatg atagggaagt agaaatgatg tgcatgatat
     7381 agtaggagat agggtgagac attaagcttt ctcatcatct tctttctcat gtttttattg
     7441 cgcattgtta attataaaac agttgaaaaa tgaaaatggg tttaacatat cgactatttt
     7501 cttatgctag agattaagag ggggaactgc ttaatgatca ttgcgatcat tttactcatc
     7561 attgtctctt gtttcttttc ggggagtgaa acggcactta ccgcagcaaa caaggtcaaa
     7621 ttaaaatcag aagcggacca gaatcaccaa agatccgcga aattattgaa gttattagaa
     7681 aaaccgagtg aattcattac cactatttta attggtaata acattgcgaa tattttgtta
     7741 ccgacattag tcacgatttt agcagtagat ataggcctaa gtgtcggtat tgcgtccgcg
     7801 gtgttaacgg tcgtcattat cgtatttgct gaagtgattc cgaaatccgt agccgcaaca
     7861 tttccagatc caattgcacg ttttgtattt ccagtgatac gcctttgtgt catcgtattt
     7921 aaaccgataa cggtcgtgtt gaatgcttta acagatggca ttaatcgtat attgtcacgt
     7981 ggacaagaaa atcaaggtat gtccaaagaa gaagtgcgta cgatggtgtc gattgcaggt
     8041 acggaaggcg catttaacga aatggaacgg aatcgtattc aaggggttat ggattttgat
     8101 cgtttgaagt tgaatgatgt cagcaatact ccgcgtgtga atgtgacatc actatctgta
     8161 gaggatacgt atgatgaagt gtatgacatt gtgatgaacc atccatacac gcgttatcca
     8221 gtatatgaag gcgatatcga taatgtggta ggtgtgtttc attctaaata tttgttagct
     8281 tggagtaaaa cacccgataa agcagtgaca gatttctgtt cagagccgtt gtttgtttat
     8341 gaacataacc gtgctgaatg ggtattgaga aagatgacgg tcacacgtaa acatatggct
     8401 attgtacttg atgaatatgg tggtacagat gcgattgtga cacatgaaga tttgattgaa
     8461 gagatgttag gtatggagat tgaagatgag atggatcgcg aagaaagcga taaattgaaa
     8521 caaatccgtt aaagtgacat aaaaatatag aaaatggctg ggaacatttc attgtgaccc
     8581 agcttttttt aaaatttaag gtgacttgac gatgtggtgt aaaacaaagg tgacagaaca
     8641 atgtcaaatt gactatccaa ttatacatgt aggaatggct gagagaatga caccagaact
     8701 cgtcgcaacg cggtcagcga attaggtgga cttgcgacga ttggtacatg ttatatgacc
     8761 tcggcagtac tcgaataaga aattttaaaa gtgaaagcac gcacatccaa gtctttttca
     8821 gtaaatttat atgtgccaga gtcattttca tataaagatg aagctgtggc ggcgatgaac
     8881 gactttttaa caccatatcg cccagcatta aatcttgaac aaccaacaat tggcgatacc
     8941 gacccttcca tatgtgacat attgattgac attgtcattc aacaacacgt ttggatttgc
     9001 agtttcactt ttggaattcc tgatgaagaa acaatcaacc gtttgaaagc agccgatatc
     9061 gtattaattg gtagtgtgac aaccggtgaa gaagtcaaag cagtagaagc agctagttgt
     9121 ggcacaagga agtgaagcag gcggtcaccg tacaacattt gatgatcatc aagagacaac
     9181 gccattaatt gggacaatgg tatgcgcccc ttaagtggcg acaacctttt taacaataca
     9241 tgaaagcacc gcaaaatcag tgtataaaca agtgatttta acagtgtggc aacagatgcg
     9301 attctgacac atgaaattat tagaaaacct gcaagagcgc ttcacaatgc atggattcag
     9361 cattttcgcg aaaaaggtcc ggtcatttta ccttagccaa tacaaaatga ttaaacgtaa
     9421 catatttgag ctgcggcagg tatggtaggc gatgcaaact ggatgcatat gtggagtggt
     9481 caaggtggcc gtctcgcgca aaatcacgat gtggctaatt ttttcaacca attgattcaa
     9541 aatgcacagt cacaagctga ataattcaac atgtaactgt gcatcatatg tgtccgctat
     9601 accgtatcgc ctgcagtacg gtgtgcgagc cattccaata acatattgag gtgtgtcgcg
     9661 ccaggattaa tacaatccaa atggtctaaa taaggtaagg catagagtgt taaatattga
     9721 ccatgcttgt agttttcttg gacataggag agcgtggtat ccatatgtac ggaagtgtcg
     9781 ttaaacccgt gtacaatgag tgtatcgaca tcaataggtg cttgcattaa aggtgaggct
     9841 gcacgcatcg tatgagttga gctagagtca aaatattccg ctgcagcgtt ttgtcctaaa
     9901 tgttgatgca acgtgtaaag gacatctgtc acaggtgcga gtgcgacgat ttgatcgaat
     9961 aactttgcgt ttaataaaac gagttgtcca cctacagaat gaccgatgcc aaccagttgt
    10021 cgtggttgat aggtagaagt tttaaaatgt tgaattgctg ctgccacatc gtcgctcggt
    10081 atcggccatg gatgtgctgt accgcgacga tattccacat tgactactgc atagcctgct
    10141 tcaatcaatg tatcaatcat taaatccatc atcgctttac tatatttttg tctccaatag
    10201 ccgccatgaa tgagaacaat ccatgcttgt gacgttttct gttcattgtc ataaacgtca
    10261 taatgttggt cttcatgtgc cccgtaactg atttgtttta ccattattaa aaactccttt
    10321 ttgcacgtct ttaatcccat tataccctat gctcctttcc aacaaacgag gggcaccatc
    10381 acgtacatca tcgtggtgga tatgataaaa tgaaggcggt gataaaaatg atagaaattg
    10441 gtctaacagg gtggggcgat catgacacct tgtatgaaga tttacagcgc aaagcagata
    10501 aattacaaac ttatgcaagt cattttccag tcgttgaatt agatgcgtca tattatgcca
    10561 tccaacctga acgtaatatt gtgaaatgga ttagtgaaac gccacaacgc tttaaattcg
    10621 tcgtcaaaat tcatcaagca ctgacgttac atgcagatta ccacgactat gcagacacga
    10681 ttgaaagttt atttcatgat tttcgacgga tgttgcaacc tttagttgaa gcagatcgtt
    10741 tagcgatggt cctcgttcag tttccgcctt ggtttgattg taatgctaaa aatattaaat
    10801 atattcgcta cgtccgcgca caactcgaac aagtaccggt atgtatcgaa tttcgtcatc
    10861 aatcttggtt ccaaggcgaa atgaaagagc atacgctaca atttttaaca gacaatcaac
    10921 ttattcattc ggtatgtgat gaacctcaag taggagaagg cagtgtccca ttagtgaacc
    10981 gcattacaca tcaaacggca ctcgttcgac ttcatggacg aaacaagtat ggttggacga
    11041 aaaaggatat gacggaccaa gaatggcggg atgtgcggta tctttataat tataacgctg
    11101 aagaattaca acaattagca gataaagtga cattattaaa tcaaaaagcg caacatgtat
    11161 atgtcgtgtt taacaacaac tcaggcggtc atgctgcagc aaatgccaag tattttcaaa
    11221 aacttttagg cattgattat gaaggtttag caccacaaca acttaaattg ttttagagga
    11281 gggcgtgacg ttgagtatta tcattcttat tctcgtagga tttttatccg ctattatcgg
    11341 ttctttagtt ggaattggtg gtggcattat cattgtaccg acattaattt attttggtgt
    11401 cacgttaaat attttagggg gcattacacc gcaaactgca attggtacat catccattat
    11461 tttaattgcg acagggttgt cttcaacggt aggttattta aaacaaaagc aagtggatgt
    11521 aaaaaatggc atcatattca cgattggtat cattccaggg gcgttgattg gtgcttattt
    11581 aagccaatat ttaacgctac attcatttaa tttatacttt gggatgtttc taattctcat
    11641 ctctgtatta ttaatggtcc gtcatcgtat accaccgatt aaagtcttcc aacaagaacg
    11701 ctatatgaag tcatttacag atgcacacgg tgaacattat cgttatggtg ttattccaac
    11761 tattgcgatt attgcgtcat ttattattgg tttaacagca ggtttatttg gcattggcgg
    11821 tggtgcattg atgacaccat taatgttgct tgtattccgt ttcccacccc atattgcagt
    11881 agggacaagt atgatgatga ttttcttctc aagtgtgact ggttccatcg gtcatattat
    11941 gttaggtcat gtgttatggg ggtacagttt gattttgatc atttcaagtt gggtcggcgc
    12001 acaattaggt gtgagattaa ataaaacggt caaatccgat accgtagttt taattttacg
    12061 attagtcatg ctaggattag ggatttatct cattttacaa tcattcttta actaaaaagt
    12121 gaggcgagat tatgcgttta acgatttatc atacgaatga tattcacagt catttacatg
    12181 cttattcacg tatcacagca tatttaacaa aggcacgtgc acaattaacg catccttctc
    12241 gttatgtcga tatcggcgat catgtcgatt tatccttacc tgtaacagaa ggcacgttag
    12301 ggaaacgcaa tatagaactc ctgaatgaag cgggatgtga tgtagcgaca atcggaaaca
    12361 atgaaggtat gacgatttca catgaagcgt tgaatgcatt gtacgatgag gcacagttta
    12421 aattgacgtg tacaaatgta ttagatgaat caggtcaatt accacacaac tttttgacat
    12481 cttatattga acaaattgaa ggcgtgcgtg tgatgtatgt cgcagcaaca gcgccattca
    12541 ccccatttta tcgcgcacta gattgggtgg tgactgatcc tcttgatgcg atacaacaag
    12601 aaatcgccgc gcataagggt gaatatgacg ttttaattgt attgagtcat gttggtatct
    12661 tttttgatga gaaactttgc gaaacactac cagaaattga tgttatcttt ggtgcccata
    12721 cccatcatta ctttgaagac ggtgaaattc aaaatggtgt attaatggcg gcagcaggaa
    12781 agtacggtca atatttaggg gaagtgacgc tagagataga aaacggtaaa gtcattgaga
    12841 agactgcgat gttacatcca cttgagcaat tgcctgaagt tgagacgaac tttgaagcgg
    12901 aagggaaagc actcctcaac gcaccagtcg tggatacacc gatcactttg caacgtgcga
    12961 tgaatcatat tacaaaagcg agttatttgt tagctgaaag cgtgcacgaa tttaccgaag
    13021 cagactgtac aattattaat gcaggtttga ttgtcaaagg ctacacggca caacgattaa
    13081 ccgaatatga tatccatcaa atgttgcccc atccaatcaa tgtcgtacgt attcgtttaa
    13141 caggggctga attgaaagaa gtgctattga aagcccgtgc tcaagaatat atgtacgatt
    13201 acgcgcaagg tctaggcttt cgtggggaca tctttggcgg ttatatttta tatgaagcgg
    13261 gctacattga atcgagtgaa cgttactttg tgaatggcaa agagattgat gatgaggcga
    13321 cttatatttt agggacggtg gatatgtaca cgtttggacg ctattttcca actttaaaag
    13381 gcggtcacat ccaatactta atgcctgagt ttttgagaga catatttaaa gaaaagttgt
    13441 taacggttta atttgcatga acaggagatt ttaatttctt gtaaagttcg ttataataga
    13501 gtaagaccta taaattatgg gaggttttcc gctgttatgg ctacaaaaaa tgaagaaatt
    13561 ttacgcaaac cagattggct taaaataaag ttaaacacaa acgagaacta cacaggctta
    13621 aagaaaatga tgcgcgaaaa aggactacat actgtatgtg aggaagcaaa atgtccaaac
    13681 atccatgagt gctggggtga gcgtcgtacg gctacattta tgatcttggg tgatgtttgt
    13741 acacgtgcat gtcgtttctg tgcagttaaa acaggtttac cgaatgagtt ggacttaggt
    13801 gagccagaac gtgtcgctga ttcagtgaaa caaatgaact tgaaacacgt cgttatcact
    13861 gcagtagcgc gtgacgactt gaaagatgcc ggttcaaatg tatacgctga aacagtacgc
    13921 aaagttcgcg agcttaaccc attcacaaca attgaaattt taccttctga catgggtggc
    13981 gactatgaag cgttagaaac attaatggct gcacgtccgg acattttaaa ccacaatatc
    14041 gaaacagtac gtcgtttaac accaagagtg cgtgcgcgtg ccacttacga tcgtacatta
    14101 gaatttttac gtcgttctaa agagttgcaa ccagacatcc caacaaaatc aagtattatg
    14161 gtgggattag gtgaaacaat tgaagaactt cacgaaacga tggatgattt acatgcgaac
    14221 ggtgtagaca ttttaacaat cggtcaatat ttacaacctt ctcgtaaaca tttaaaagta
    14281 caaaaatact acacaccatt agaatttggt aaattgcgta aagttgcgat ggaaaaaggc
    14341 ttcaaacatt gtcaagcggg tccattagtg cgtagttctt accatgcaga tgaacaagta
    14401 aatgaagcag ctaaagcgaa acatcgactt ggtgaagaac aacttaaatt ataagaacca
    14461 ggtgatgaac gtatgattaa agtaggaaac cattattttg aattattaac gtcatataaa
    14521 gatgggttca atgaagatga ttttattgcg agatattctg aaattctaga taaatatgac
    14581 tttgtcgttg gggactatgg ttacgatcaa ttgagattaa agggcttcta tcatgattcc
    14641 tataaaaaag cagattttaa caaacgcttt tcaacgatac aagattatct ctatgaatat
    14701 tgtaattttg gatgtgccta ctttgtcgta cgtcgacttt caaaagcaga agtcgaacaa
    14761 caattaggac atgatgcgcc tattgatgca acagataaat tgaaggatgt caaaatacaa
    14821 ccgacaatac aagattaaat cattcgaatg atatatgagc agcatgtgca tagtgaagta
    14881 tagtgaactt catcgtgtgc gtgctgtttt tttatttggg atattaagta ttgactgtga
    14941 tcagttaaga aggaaacaga ggaaagcgct gaaaaaataa gcattgcaag acgtttgatg
    15001 acgcggaaat cttgatccag tctctctaca gaaaatgatt gaaatgatga agtgagaata
    15061 ttggtgaaaa atggcatgaa gaagaaaagt aattgtagaa acctgtaaca ttagatgtcc
    15121 tgcgccataa tagttaaaaa ccgtgcaaag atcccgaggg atgatgtaaa aaaacaataa
    15181 cgtcatttaa ctttaaatgt ggctagtgtt caacgcagta gatgtctgat tgctcaaggt
    15241 ttgcactttt gagaagccta gccaagcttg cgggggcagt atgacgaaat ctttgttgta
    15301 catgaaattt atgtcctgct ccccaaatcc atttcggcta catcccaata tacactttaa
    15361 tcaagttgaa ttgcgttgaa gggatagcgc ctaggaaagc gtagcactgt tcggcaatcg
    15421 aacgaacaaa aaataaccta tgtacaacaa agatttaaaa ttaccactac tgaatcactt
    15481 catgcaaata agccttaatc tcatcgccct cttcttcact cacgcccaaa atataagcaa
    15541 tataaccttc ttcctctaaa tcatccgtcc caataatccc aaacttattc gtctgcgtat
    15601 ttaacactaa cgtcttacca taatgacgat ccgtttgaat caacaccaaa tcataacggc
    15661 tatgctcacc aacaaagcca acaaaacgaa tttgagaagg ttccatatca tcatataaaa
    15721 acatatctat catgtgtgta actcctttaa aatcatgtta aggcaagtat agcgataaat
    15781 gaagttgcat gcaaaattat gatatgatag aggggaatag gggtgaccat aaagtgtatt
    15841 ttgttgataa aacacaatta gaaacgaaat taaaatattt aaaacaactc actgaagatt
    15901 atgagacggt aaaatcaaat cattacgcat ttgaacgtgt cgcacaaatg ttgattgagt
    15961 cctcagtcga tatcggcaac atgattatcg atgccttcat tttgagagac ccaggcaatt
    16021 ataaagacgt cattgatatt ttagagcttg agggtgccat ttctaaagag acccaacacg
    16081 ctttacacaa aacgatagat gtgcgccgtc agttcgtgca ctattacgat acattagata
    16141 tagcgcagtt aatcccatta tttgatcaaa cagtcccatt ttatgagcag tttattgaag
    16201 aagttttaca gtttttagaa aatgaaaatg tccctgtaac agcatttgga aaaggagcgc
    16261 aataagcaat gaaagcatac aaaggctatt taatcgactt ggatggaacg atgtataaag
    16321 gtaatcaaaa aattgaaggt gcatctgaat ttattgatta cttaaatgaa aatcaaattc
    16381 cacatttata tgtgacgaat aactcaacga aagcaccagt cgatgtagtg gaaaaactaa
    16441 cgacgatggc cattgacgca aagccacaag aagtcattac gtcagcaatg gcaacagcag
    16501 attatatcca tggtgaaaaa ccaggtgcca cagtttttat gattgggggc tctggattag
    16561 cgacagcatt agaagaggcg ggcttacaac ttgaaaatga catcaatgtc gattacgtcg
    16621 ttgtaggttt ggacgaagcg attacttatg aaaaactaac gacagcaacg ttagccgttc
    16681 aaaacggtgc gacatttatt tctaccaatc cggacccatc gattcctaaa gaacaaggct
    16741 ttttaccagg caacggttct ttgacaagcg ttgtaacggt atcatctaaa caacagccga
    16801 tttttattgg taaacctgaa acacctatca tggaaaaatc gttagaagtg ctacaactga
    16861 acaaagatga agtggcgatg attggtgatt tatacgacac ggatattatg gcaggaatta
    16921 acttcggcat cgatacgatt catgttcaaa caggtgtaac gtcgaaagaa gaagtcatgc
    16981 aacgtgacgt accgccgact tatagtgtga aagatttgaa tgagttacgt gaacaattaa
    17041 tcaaaggcga gtgatgagag atggaaaaaa ttttagtaac gcgacgtatt ccacagaaat
    17101 ttgtagaacg acttgaaact ttaggtgaag ttgaaatgtg ggatcatgaa ttgacaccta
    17161 tgccacgtga gaaatttata gcagcagtcc aagataaaac agcgatactt gtcacgttaa
    17221 gtgaaaaaat cgatgccact ttatttgaag cggcgccgaa tttgaaaatt gtcgcaaata
    17281 tggctgtagg ttttgacaat attgatttac aagcagcagc gcaacatgaa gtcgagattt
    17341 caaacacacc acatgtgcta actgagacaa cagctgaatt aggctttgcg cttatgatgg
    17401 caacgtcccg acgtatcgta gaagcagaaa aatatgtaca agatggcaaa tgggaaagct
    17461 ggggccctta tttgttagcc ggtaaagata tttatcaatc taaagttggt atttatggaa
    17521 tgggtgagat cggtcgtgcc tttgcgcgtc gtttaaaagg attccacgct gacattttgt
    17581 atcacaaccg ttcgcgaaat attcaagccg aacaagaatt aggtgcgttt tacacatcat
    17641 ttgataaatt gattaaagaa agtgattttg tcatttgtac ggcaccgtct acacctgaca
    17701 cgcaaaataa attcaataaa gaagtattca agaatatgcg taaggatgcg attttcatta
    17761 atatcggtcg tggggattta gttgttgaag aagatctcgt tgaagcgatt gaaacaggag
    17821 aaattgccgg ctgtggttta gatgtcgtgc gcgatgaacc aattcgtaca gatcatccgt
    17881 tactgcagta tccgaacgtc attgtaacac cacatatcgg tagtgcgact gtactcacac
    17941 gtgaccaaat gattcaaacg tgtttattaa atattaagga cgttttagaa ggtcaaaaac
    18001 cgcgcaatca agttaaaatg ggttagcatt tcaacataaa aaagagctgg gattattgtc
    18061 ttttcccagc ctttatctat tcattaaaga ttataaaaca gcagaaaaaa gaggatgaat
    18121 tggatgaaaa attgatgcta ttgtttttct ggattttata aacttgctct tagttttact
    18181 ttatttaatg taagattgcc tagaaagctg aaactcgtga ggaattgact acatactgct
    18241 aactgtcact tttttacatt aaaagtggtt accgtttaac gcagtagctg tctgacttct
    18301 caatgcgcat gcttttgaga agtctagtca gccttgcggg gcaatacgac gacatctttg
    18361 tgacacaaat gctttctgta ctactctcaa aatccaattc ggcatctatc ttgtttacat
    18421 tataatcaag tcgaattgag ttgaaggttc agtccctggg aacgcgtagc catgagtgca
    18481 atcataaaca caaatggtag gatatgaggg cgagttaaac cagaatgctg caccaatagc
    18541 atcaaaaatt tttttgtgtc tcatcttctt tttttctcat atgaaatacg acattgaatt
    18601 aaacatgttg ttagaatact tgttcgacct cgacaacacc tggtacttct tctactaatg
    18661 cacgttcaat cccagctttt aaagtaattg tactacttgg gcatgtgcca caagcaccga
    18721 gtaattgaag ttttacaata ccatcttcca cgtcgacaag ttcacagtcg ccaccgtcac
    18781 gtaataagaa cgggcgtaat ttctcaatga cttctgcaac ttgatcgtac attgtagcat
    18841 tttcagttgg catgcgtaat gcctcctttc aaatttaaat ggttcatttt atccttatct
    18901 ttttattata atagaatcag tacaaaaaat ctatcgaatc aattaggggg atggctatgg
    18961 aaaaagtaag tgtcgttgtg tatggtgcag aagtcgtttg tgcaagttgc gtgaatgcac
    19021 caagttcgga aaacacgtat gattggttga aaacattatt accacgaaaa tatccaaaca
    19081 tcgattttga atacacatat attgatatta tgggggcaca agataatttg tcagatcatg
    19141 atatacagtt tattgaacaa attcaagaag atgaattgtt ttacccatta gtgacgatga
    19201 acgatgaata tgtggcagat ggttatgttc aattgaaacc aattaaacgt tttattgaac
    19261 gcaactttga agtatccgca gaagaggaga agtagagaac aatagcaggg ttaggaatag
    19321 aaggttttta gctttaattc tttcgtaagt ttcatgattc attaatgatt ttaaagcagt
    19381 cggaaaatga gggtaaatgg gatagaaaaa ttgatgctat tgttttttga tttcataaac
    19441 ttgttctcag tttcacttta tttgatatca gattttattt gatgcacttt tgagttgatt
    19501 tccgtaacat tagggcatga ttgtagcacc tctaatataa aaatgccaaa atgggcacgc
    19561 attccgagga tgagcctata ggaacataag ctcattttgg catttataaa attagcgttt
    19621 aaatgaacag taaaagttca atttctatcc gttatgatat ttatacaacc aaagtacgcc
    19681 tgatttcaag atggaagcta aacgtccagt taccgttgta tccatcaaat aagcaaaacc
    19741 tttcttttca cctaaagaac ctagaaaacc ttgaatctta atttcaggca ttttttcagg
    19801 taaatttttc cctttccaca atgtcgttaa caccatcgcg atttggtcag cttgttcttc
    19861 agcgagttgt gcgctcgggg catgtggcaa gttcgcacag tctccaacaa catatacatt
    19921 aggatacgtt gggatttggt gatattggtt caccatcacg cgattactac gacttaagtc
    19981 aacaggcaga tttcgcacga tttcgacagg ttgaattcct gcagtccaga cgatgaggtc
    20041 gtgttcattt ttcgtttctt tattataaag tatacctggt tcaactttga cgatatccga
    20101 attaggcacg actgtgacat cgtgttgatc gaaccatttt ttaacataat tacttaattt
    20161 ttcagggaat tgatttaaaa tacgctcacc gcgatcgtat aagtagattt tcaaatcgct
    20221 acgactttcg cgtaatgcac tcgcgagttc gataccactt aaaccagcac cgacaatacc
    20281 gacagttgca ttggtaggaa gatcagaaat gtcgtggtaa gttttacgag cgtcatgtaa
    20341 agtttggatg ctgtacgtat attctttagc acctgggaca ttgtggtatt tatcttcgca
    20401 gcctagaccg atcactagtt catcgtaatc gacttttgtt tgacctacag aaatgatttg
    20461 attgtctaaa tcgatatctg taatttctcc gtatactgtg tgggttctgt catgttgtgg
    20521 gaaattaaca cgtacctctt tatcagattt agagccagca gctaatgcat aaaattctgt
    20581 tttaagccca tggtaaggca tccggtcgat taacgtcata ttataatcat ttggaagcgc
    20641 gtctggtaaa attttagaca taatgcgcat gttaccataa ccgccgccta gcaatactaa
    20701 attcttcatt ttgatacccc tctttagtga tgtatattcc gatatctatt tcagcaatgg
    20761 actccacaca aaacgaaata ggcaccgttc aagttattga tcatagctct aaatttaatt
    20821 atatcccttt ttcgaaagcc acacaaacaa aggaaaacac gtgctttcaa aatttttcac
    20881 aaaccaattt tgtcaatcca atcgatgtgt atgatgaagc gttaacatga gccgtctcat
    20941 agatgtccgt tctaaaattt gttatactga taacattaaa acatagaaga gggtgtaaaa
    21001 tgaatccgat tgtcgagttt tgtatttcta atatggcgag aggttcagaa gttgtttacc
    21061 aaactttaga aaatgatccg ggagtggatg ttctagatta tggttgcctt caaaactgtg
    21121 ggatttgttc gtcgggactc tacgcacttg tgaatggtga tatagttgaa ggtgatacgc
    21181 cagacgattt attgcaaaat atttataagc atatagaaga aacgtggact ttttaaggag
    21241 gctaaaacat ggcagtagtc aatttgacag aagcagcagc atatgaagtg aaagatatgt
    21301 tgaagcaaaa tgatatggca gatggttatt taaaagtgaa agtaaacggt gggggttgta
    21361 caggtttaac gtacggcatg actgctgaag ctgaaccagg tgaaaatgat gaagtacttg
    21421 aatttttcgg tttaaaagta cttgtagata aagaagatgc gccgatttta aatggcacaa
    21481 ctattgactt taaacaatct ttaatgggtg gcggttttca aatcgataat ccgaacgcga
    21541 ttgcatcatg tggttgtggt agctcattta gaacagcgca ggcggcaggt tcaccagaaa
    21601 gttgttaatc gagtgaatgg tggacaacgt cctttttaat gcgatttatg tcatgcttaa
    21661 aaagactgaa atgtaacata tgaaagcaac tacagagtga tattgaatat ccgagactct
    21721 tcgccatatc gaattgtctc ggttttcttc gtatgacacg gatgcattca aaatgagatc
    21781 gagtaggtgg catagcatag gctaagcgta cttacaatga tttgacgcgt cacaatattt
    21841 ttttaagatg agcgacaaaa ataatgaaaa tctgttgaaa acttataggg tattaacttg
    21901 aattcaataa taaaaaacta tacactaatg aatgacaata ttttacaatt ttgtgtactg
    21961 taaaaattga gagggtatac agtattattg gaatttgatt atatttacga aagaataggt
    22021 gaatgcaaat ggcagaacgt aaaaaagtac ttgttttagg tgctggttat gcgggcttac
    22081 aaactgttac aaaacttcaa aaaaaattat cagaacaaga cgcacagatt actttaatca
    22141 acaaaaacga ctatcactat gaagcaactt ggttacatga agcttcagca ggtacattaa
    22201 attatgagga cgtcttatat ccaatcgaaa acgtgttgaa aaaacatgtt gatttcgttc
    22261 gtgcggaagt aacaaaaatc gaccgcaatg cgaaaaaagt tgaaacaaca cgcggtattt
    22321 tcgaatatga tattttagtt gttgctttag gttttgaatc agaaacattt ggcattgaag
    22381 gtatgaaaga acacgctttc caaatcgaaa atgtcaatac tgcgcgtcaa atctctcgcc
    22441 atcttgaaga taaatttgta aattatgctg catcaaaaac aaaagacgac aaagacttag
    22501 cgattcttgt cggcggagca ggattcactg gaattgaatt tttaggtgaa ttaacagacc
    22561 gtattcctga acttgctaac aaatacggtg tagaacaaag taaagtaaaa gttacttgtg
    22621 tagaagctgc gccaaaaatg ttaccaatgt tttctgatga gcttgttagt catgcagtga
    22681 gctatttaga acaacgcggt gtagagttca aagtcggtac acctattgtt gcagcaaatg
    22741 acaaaggttt cgttgttaaa attaatgatg aagagcaaca attagaagcg aacactgtca
    22801 tttgggctgc aggtgttcgt ggtagccaat taatggaaaa atcattcgaa ggcgttaaac
    22861 gtggacgtat tgtaacgaaa caagatttaa ctatcgaggg ttacgatgac atcttcgtca
    22921 ttggtgacgt ctctgcattc atccctgaag gtggcgatcg tccattacca acaacagctc
    22981 aaatcgcaat gcaacaaggt gaaaaaacag cttctaacat tgtgaatatc ttaaaaggtg
    23041 caccaacaga agacttcaaa tatagcgatc gtggtacagt atgttcatta ggtcgtcatg
    23101 acggtgtggg tatcgtttat ggccgcgaaa ttactggtaa aaaagcagca ttcatgaaac
    23161 gtgtcattga tacacgtgcc atctttaaaa ttggtggttt aggtttagct tacaaaaaag
    23221 gtaaatttta agcattaatc aaccctgctt tgattcgacg atattaaaat caggagtctc
    23281 actgagtaag gttttgaaat aacgcattga tgatgaaacg gtatgacttt tatcagtcca
    23341 atgcttgatt agagaaaaag attttaagca tacggtatac atatacagtg taacaaaatg
    23401 tatatgataa ctgcagggag tggaaaaggg atctaaatgt catatttagg ttgctcttct
    23461 actccttttt tacatattaa aaaggagtga aagtgatgcc ttcacagcaa acagaaacag
    23521 cagctgcgat cattgcaggt gttccagaac atttaaacca atatttcgat gtcgtgaaac
    23581 aggatacggc atttttcgaa gcattgacgg aattaaaagc acatcatctc atcagttcaa
    23641 aagcaggtga aattgcgtca actggagtca caatagaaaa tcaaatgtat cgtttaatta
    23701 cggtaggtct cggtaatttg aaccaattga aagcacaaga ttatttgaaa atatggggca
    23761 aattattcca atatttacaa caaggtgcga ttgctaaaat caatttaaaa gtgaatacat
    23821 ttttagccaa atcactagaa tcagaaacga tatttaaatt aatgggtctt caaagtgaac
    23881 aggcgattta tcaatttgat gattataaat ctgataaaaa agcaccgttc catcttaaaa
    23941 tggtattgga ttgtgaccaa gtgtcagact atacagatcc aattgaagtg ggacaaaagt
    24001 taggtcgtgc cgttaaccgc gcgcgtgatt tgagtaatac accaccaaat attatgacgc
    24061 ctgcttattt agctgaaacg gttgaacagt attttaaaga tacagcagtt aaagtccaca
    24121 ttaaagatga acacgcgatt gtacaagaag gattcggatt agtccaagct gtcggcaaag
    24181 ggtctgtaca tcctccgcgt atgattacat tagaatatca aggagatccg gaccatgaag
    24241 accgagtgat cgctttagtc ggtaaaggga ttacgtacga ttcaggtggt tattccatca
    24301 aatctaaaaa tggcatgccg tcaatgaaat ttgatatgag tggtgcggct aacgtcattg
    24361 gtatggttga agcaatccga gcattgaaac tcaaagtgaa tattgtcgcc gttattgcgg
    24421 cagcagaaaa tatgattgca aataatgcga tgaagccgga tgatgtattt acagcggtca
    24481 gtggtgaaac cgtcgaagtg ccgaataccg atgcggaagg gcgtttagtg ttggctgacg
    24541 cgacgtttta tgcgaaccaa tacaagcccg agatgattat ggacttcgca acattgacag
    24601 gagcggcagt tgttgcatta ggtgaagata aagcagccgt gttccaacat cgtgtccaac
    24661 cagaagtgtt gaatcaaatt tttcaaactt ctcaaattta tgaagaacct gtgtttgagt
    24721 tgccgattac tgagacagaa cgtaaaaata ttaaagcatc agatgtggca gatttaacga
    24781 accatgtcaa tgcgcacggt aaagctttat ttgcggcagc atttattatg catttcagtg
    24841 gtcaaacacc acatcttcat tttgatattg cgggaccagc aacaatcaat aaagcgacac
    24901 ataaaggtcc aaaaggtcca acaggcttta tgattcctac aattgtcaca tggttgaaaa
    24961 atcaatacgg tatgaatcag taaagaaagg gggagtgtgc catgaatttg tgccactccc
    25021 gttttaattt tgatgtagta agcattgacg aatgacgtga caactgttac cattataccc
    25081 atacgcttta gctcgataat gaattaaagg agatagaaaa atgaatgctg tgttaatagc
    25141 ggtcgtcatc atgatagtgc tctgtttatg tcggctcaac gtcgtcatta gtttatttat
    25201 tagtgcactc atcggcggat ggattgcagg tctgccattt gataaaacga ttacaacttt
    25261 tacagaaaat attatggatg gggcagaagt agcgctcagt tatgctttac tcggtggctt
    25321 tgctgcactc atttcataca gtgggattac agattatctc gtacgtaaag tgattttatc
    25381 tattcgtgca gaagagacaa aagtttcgag aattaaagtg aaagtactca ttatcgtgag
    25441 cttactatta ctgagtatca tgagtcaaaa cgtgattcca gtccatattg cttttattcc
    25501 aattgtgatt ccccctttat taagcttatt taatgaattg aaaatcgatc gccgcttaat
    25561 tgcgatgatt attggttttg gtctatgttt tccgtatgtc ttattaccat ttggcttcgg
    25621 tcacattttc catgagatca ttcaaaaagg atttgaaaag gcacaccatc cgattgaatt
    25681 taatatgatc tggaaagcaa tgctcatacc agcatcgggt tatattatcg gacttattat
    25741 cgccatgttt tattatcgta aaccgagaac gtatcgggaa acggcagcgc aagaggaaga
    25801 ggtggctgtg gatttaaagc catctgtcat tatcgttacg gttgttgcga ttttagctac
    25861 atttctcgtt caaatgttct cagattcaat gattttcggt gcattggcag gggtacttgt
    25921 ctttttcatt tctggtattt attcttggcg caaactcgac gaccaatttg tggatggcat
    25981 taaaattatg gcttacatcg gcgtcgtgat tttaactgcg aatggttttg caggtgtgat
    26041 gaatgcgaca ggtgatattg aaaagttagt gaccggctta actacgattt caggagataa
    26101 tttattggta agtattgtac tcatgtatct catcggttta gtcgtgactt taggaattgg
    26161 ttcttcattt gcgacgatcc caattttagc cgcgctcttt ataccgtttg gtgaagcaat
    26221 gggaatgagt acgatggcat taatcgcatt aatcggtaca gcgagtgcac ttggggattc
    26281 aggttctcca gcgagcgatt cgacattagg accaacagca ggactcaatg tagacggtca
    26341 gcacgatcat attcgtgata cgtgtattcc gaactttgtc ttttataata taccactcat
    26401 tattatggga acgattgcgg cactcgtatt ataataatag aaaaaggagt gaccctcatg
    26461 acaaacttaa tcgagttatt agaaatgaaa gtcgaagcac aggaggacgg ctatttgaaa
    26521 atgtcgatgc ctgtgacgga taaagtcaaa cagccatttg gttatttaca tggcggagca
    26581 tcactcgcat taggggaaac agcatgttcg ctaggctcgg cccatttaat agacacttcg
    26641 acgcatattc ctttagggtt agaaatgaat gcgaaccata tcagttcagt ccgtgaaggt
    26701 gtcgtttatg cagaagcacg cattttgcat caaggtagta caacgcatgt gtgggacatt
    26761 catattaaaa atcaagcagg gcagttgatt tcagccatgc gcggtacgat tgcgattaaa
    26821 ccattgaagc agtaatttga gagaagggca gacatagaaa attttgaagc tattgatgta
    26881 gtattttgtt taacttgccc tccatttgat ttgtggtttt tgattgccat catggcttcg
    26941 cattccgagg ggctagtcct ttaactcact aatgttggat taaactgcta catttgttga
    27001 ggcgttagtg gattttggga gcaatacaga accctcatgt gtcacaaaga tttcgtcgta
    27061 ctgcttccgc aaggcgggct ggacttctca aaagtgtata cgttgagaag tcagaccgct
    27121 actgcgataa acagtagcca ctattaaagt gtagaggtca ctgtaagcag tatgcatgca
    27181 ttcccacagg cgtctcagcc ttctgaacaa ccttatagta aacattttga gggcatgttt
    27241 atgaaatgaa aacaattcat agcatcccat tttttatgtc cgattcatcc ctattattaa
    27301 cggttgaatc atcattaatc gataaaagtt catgaaaggg taggaactgg gaaaacttaa
    27361 tgcgtcatcc ccttttccta tgataaaaga aaataataat aatcaaagtt tttatgcctc
    27421 atccttctca cgttttctct ttttgaacaa agataccaca acattacgta agagtagtaa
    27481 aactaaaaag tcaataggaa cttgtactgc ggttgtactg aatcattgca agaagacgca
    27541 aactaaaaag agcaataacc tcaaaatcaa ataagtgaaa ataagcttga gcattctatc
    27601 ccctcatatg aaaatgttac tatgatatta
//
LOCUS       DANHPA010000020        27408 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.020, whole genome shotgun sequence.
ACCESSION   DANHPA010000020 DANHPA010000000
VERSION     DANHPA010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 27408)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27408)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27408
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.020"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            117..2564
                     /locus_tag="PTC28_000707"
     CDS             117..2564
                     /locus_tag="PTC28_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000884880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence-associated E family protein"
                     /protein_id="HDK5716022.1"
                     /translation="MLDRVTQVKNIKYDRDISYAYASSRLATHWTNHNMSWSEFMQKL
                     STTVRTKESLLEYNKMSKTEQSDIKDVGGFVGGYLKEGKRRAGQVMNRSMLTLDIDYA
                     AHDMADTLSMFYDFAYCVYSTHKHRDVSPRLRLVVPLKRNVNADEYEAVGRKVADMVG
                     MDFFDDTTYQPHRLMYWPSTSSDAEFFFTYEDLPLLDPDKLLNSYNDWTDTLEWPTSS
                     RKENKTKRLADKQGNPEEKPGLVGAFCRAYSIEEAIETFIPDLYDVHSTNRYTYHEGS
                     TAGGLVIYESGKFAYSHHNTDPVSGQLVNSFDLIRIHLYGAQDEDAKEGTPVNRLPSY
                     KAMQTKAQNDEKVKQQLINDKMTAAMEDFDEVDVDLSAWRGNLEVNANGDFKATIPNI
                     ENILCNDPNLKGKIVFNEFTKQIECTGRVPWNKSIKIRQWQDADDSALRGYLEKIYEI
                     HHAGKTKDAIISVALQNAYHPVRDYLNTLVWDGVSRLERLFIKYLGVDDTEVNRVVTR
                     KTLVAAVARVMNPGCKFDYMLTLYGPQGVGKSAILKKLGGAWFSDSLVSVTGKEAYEA
                     LQGVWIMEMAELAATRKAEVEAIKHFISKQIDRFRVAYGHYIEDFPRQCIFIGTTNKI
                     DFLKDETGGRRFWPLTVNPDKVEENWSQLTKDDINQIWAEAKYFYEQGEDLYLSSELE
                     KEMRAIQSKHTEESPYVGIVEEFLNTPIPSNWNELSIFDRRRFYQGDVDMLPTGKVDY
                     VERYKVCALEIFVECFGRDKGDSRGSIELRKINSAIRNIGSWEPYEGSNTGKMRFGKD
                     YGVQVAYVKSDINNELL"
     gene            2911..3207
                     /locus_tag="PTC28_000708"
     CDS             2911..3207
                     /locus_tag="PTC28_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VRR-NUC domain-containing protein"
                     /protein_id="HDK5716023.1"
                     /translation="MKETKLEQYLVKEIKKENGLCLKWVSPGTKGVPDRIVIMPGGKT
                     YFVEMKQNKGRIDPLQKYMHKQFNQRGHKVYVLWTKEHVNEFVNKVGDRSGDKI"
     gene            3182..4555
                     /locus_tag="PTC28_000709"
     CDS             3182..4555
                     /locus_tag="PTC28_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDK5716024.1"
                     /translation="MIEVAIKFKPHAYQKHAIDKVIENERFGLFLDMGLGKTVSTLTA
                     FKDLQLLDTDKMLVIAPKRVAKETWADEIKKWVHLNHLKVALVLGTPKQRIAALNKEA
                     DVYVTNKENTKWLCDYYAKEWPFDMIVIDELSTFKNPSSQRFKAIGKKLPLVKRFIGL
                     TGTPSPNSLLDLWAQIYLIDSGERLEKSFSKYRERFFRPTHKLSPYVFNWELKDGSEG
                     LIYKQIEDICLSMKARDYLKMPERVDTKQVVTLTSKERKLYDGLEKHYILEFEEDGTI
                     VAQSGAALSQKLLQLSNGAVYTDDNNVRCIHDQKLDKLEEILEEAQGQPILLFYNFKH
                     DKDRIIERFEDVITLDDPEYKSKWETGKAKLLIAHPASAGHGLNLQDGGHIIVWFGLT
                     WSLELYQQANARLYRQGQQHTTIIHHIMTDNTIDQRVYSALQNKKLTQNELMEAVKAR
                     ILELKDE"
     gene            4577..4993
                     /locus_tag="PTC28_000710"
     CDS             4577..4993
                     /locus_tag="PTC28_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000058632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDK5716025.1"
                     /translation="MLRKSTINYLESELRGYPYLEKDIARVREEILHPWSPKDENVGG
                     GRADTVMCVTEVRATSVINDRRLAQLTRVKLAIEIVYNHTTDEGRKLMDLYYFTKPRT
                     LNLTGVANALHISKTVAYDLRKGILSMLADELGIIH"
     gene            5218..5658
                     /locus_tag="PTC28_000711"
     CDS             5218..5658
                     /locus_tag="PTC28_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002488642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HDK5716026.1"
                     /translation="MKLTIKQERLVDEYVKTGNAYQSAINAGYSKSYARVDVHKVLAK
                     PRIKQAIDNRLAQLKKESIADQDEILQYLTSVMRGESTEQILRNVGEGYQDIDNIDVG
                     AKDRIKAAELLGKRYMMWNGKQVESQESKLETLIKQNRQVISDE"
     gene            5651..6901
                     /locus_tag="PTC28_000712"
     CDS             5651..6901
                     /locus_tag="PTC28_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001037586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBSX family phage terminase large subunit"
                     /protein_id="HDK5716027.1"
                     /translation="MNKLSHQFTDKQFQIYQEIMKKDWFLCILYGAKRTGKTIFNNYM
                     FLEEVLNVRERATKLGIRNPQYILAGYTLGTIQKNVLEELTNMYGLEFTFDKYNRFKL
                     FGVTIVQTPHGNVKGLAAIRGMTAFGAYINEASLAHPSVFDEIKSRCSGEGARILSDT
                     NPDNPEHWLLKDYIQNDDESIISYHFELDDNTFLSERYRKNIKATTPSGMMYDRNILG
                     LWVSGDGLVYQDFDKKIHTMTQDELKQIPMKQYFAGVDWGYEHHGVIVVFGMGYDDRF
                     YLIEEHAKQHVFIEDWVRIAHDIKARYGDIPFYCDSARSEHVAKFDEEGINAIFADKR
                     IMRGVELVAHYYKNNRIRIVYDACPRFASEIYNYAWDTKKDLPIKEYDDVMDAMRYAL
                     LTFVETFEQRSVEDEIDLIQQLGI"
     gene            6911..8314
                     /locus_tag="PTC28_000713"
     CDS             6911..8314
                     /locus_tag="PTC28_000713"
                     /inference="COORDINATES: protein motif:HMM:TIGR01538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDK5716028.1"
                     /translation="MRFKPDSNLIFTCKDVDDLLAKNGEKLLTFFNLHRDQQRPRLQE
                     LLDYYLTNNRGINKREGRDEPYADYRIAHAFVKNGTDFIRGYIGGNEITFRDEKYNEE
                     IQNINDLNDAHVTNVEILEDCIIYGRAYEIVYRNTDNQDIFKRLDPKNVFVIYSNDIE
                     VEPVAAVRYRSEKINGKDVTLIDLYTASYRAYFYIDDNRLIARQDMPQEVNMHQMLQI
                     HEYNANRFRQGVFENVLDLIDAYDYAESDTANYMTDLNDAMLKIEGHLDLKLEEVKKM
                     RKSRIILAKTKADASGRMGNANVDFIYKQYDVAGVEAYKKRIQKDIHKFTNTPDLSDE
                     NFGGVQSGEAMKYKLFGLEQLRSTIERQLTKGFKRRFAIIQSVRNQLNDPIDLSHMRI
                     EYKPNIPQSLSEYADIFIKLGGRVSQETLLSWLPNIENPKEELEKVKAEEQDNHDYHD
                     VMPLQQEKADMNDVELE"
     gene            8298..9881
                     /locus_tag="PTC28_000714"
     CDS             8298..9881
                     /locus_tag="PTC28_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
                     /protein_id="HDK5716029.1"
                     /translation="MSNLSDYWLERAQQAIQSETLEDAAKVAEIERIVAMMIADIYKN
                     LLAYYAKLATAEGIDWGEAKQIADKFDVEAFQMQAKAYVENKDFSDKANQELKRFNTT
                     MYVNREQLLKHELGLIVTKGYAEQENVINKHLHDSVTRTLRHQAGILGADVHVKQSDV
                     EAIVYSNFGKLNWSERLWNNQDELRKDVERMASHVMLRGRHPYEFVPEIRKKQQQTVA
                     NTKRLLITEAARVQTEAQKLHYLETIGKDAEYEFVAKRDEKTSKICRHYDKKVFKVKD
                     MVPGVNAPPMHPHCRSTTVPHVGNWRDKFFKDRQGKYRLKDEDAQAIDTNNSNSNEQE
                     PFGLNKRNKNDEFKVDVKYIQSNEYRRKFDKISDNKVLNRNIYQAAKEMLQHRNGDDR
                     EDLYGFDEKTGKMLFKSIENKNNKSKVYYTKNIEKIVEKNPYQIISVHNHPRSTLPSV
                     GDLTAQHLRKYAKGIIVGHNGRLIVYSVNKDVDFNFLKVSINSSLKKAQMKYNTSEKI
                     HEDMLSSLKKLGLINYRGI"
     gene            9903..10088
                     /locus_tag="PTC28_000715"
     CDS             9903..10088
                     /locus_tag="PTC28_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716030.1"
                     /translation="MKKELDYEKLNRIKADIIETAKNIKVPDVEDGPFETFESPEGFD
                     DLTDEEIRYLAFGIKPD"
     gene            10272..10856
                     /locus_tag="PTC28_000716"
     CDS             10272..10856
                     /locus_tag="PTC28_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4355 domain-containing protein"
                     /protein_id="HDK5716031.1"
                     /translation="MKEQWLKLSLQFFSDAGTDGEAVAEQADVSDAQAEEVEDTEQLT
                     EAQLKLVNDRVNAEMQRRTKEMRQQIQDELTEKQKEADKLRKMNAEQKHQYELEKTEK
                     ERDDYKKQLETYKMRQEATSMLNDAGMHVPDALLDLVVKETAEDTKATVDSFVALVNQ
                     EVQRQLESKATQSHVVGNHVRTPEVEEAWKTFLN"
     gene            10874..11086
                     /locus_tag="PTC28_000717"
                     /pseudo
     CDS             10874..11086
                     /locus_tag="PTC28_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729310.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            11832..12155
                     /locus_tag="PTC28_000718"
     CDS             11832..12155
                     /locus_tag="PTC28_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head-tail connector protein"
                     /protein_id="HDK5716032.1"
                     /translation="MKTFLDKVKKRIGIEDHLQDKLLCEIITNVVDELKLRLPKEQAF
                     IPQPLYFIVIEVAVKRYNKVGSEGMVSESVEGRSMSYEEDDFKQYDGFINKFFDDGCG
                     EVLFF"
     gene            12152..12469
                     /locus_tag="PTC28_000719"
     CDS             12152..12469
                     /locus_tag="PTC28_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019236224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716033.1"
                     /translation="MRYDKRVDFTIEEIDEYNPDTSKYDKKIVKKWPTMPCNINPLST
                     SKTVLEFGDVTKEINVLRIHRPIGERPTHAYVNGVKYTIIKNGLSWFYVEEVVNRETK
                     RNN"
     gene            12447..12794
                     /locus_tag="PTC28_000720"
     CDS             12447..12794
                     /locus_tag="PTC28_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016064896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716034.1"
                     /translation="MRLSGITELKRVMKNMSRIGDDVAEIMAGHSSDAVGIAVDNAKE
                     VMNKGYWTGNLAREISSEMTTKLSFMLISGAYYSGFLEYGTRYMAAEPFMQPTVKIIK
                     NKLRDDFSELLSG"
     gene            12808..13194
                     /locus_tag="PTC28_000721"
     CDS             12808..13194
                     /locus_tag="PTC28_000721"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716035.1"
                     /translation="MLSPQLQIYNYVFKKLQGYGASVIGVKDIKRTIPYPFYMVQRSQ
                     NTKSHETLDMYSGNISLMIHLYSLADDELKHDKYLRIADKIVSSPFNLDGYQVVTLSV
                     DFKTLIDNTTNACLLHSVLTVEFKVY"
     gene            13208..13786
                     /locus_tag="PTC28_000722"
     CDS             13208..13786
                     /locus_tag="PTC28_000722"
                     /inference="COORDINATES: protein motif:HMM:NF017961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail protein, TP901-1 family"
                     /protein_id="HDK5716036.1"
                     /translation="MEIVQGSDILILARKLGDKKNANKVILGKEYKISSEADSDTVDT
                     FDGSFETGGSKKTTVGITALMKRGDKFAETIESSLGKVKYELWLIDIKDLGTGSDSNK
                     FRARYLQGIFKKFDQKIETGNAVEYEVEFNESGGGLKYGYATLSAELKATLENAGYKF
                     HDTLASDPGIDEKASTSATATSTADRQSTAQA"
     gene            13843..14190
                     /locus_tag="PTC28_000723"
     CDS             13843..14190
                     /locus_tag="PTC28_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDK5716037.1"
                     /translation="MLTVNFNQTELEIHFGLGELTEIDKELGFDVRDVKLGEGLEMLV
                     PKLQTGNPIAIAKIVLATTRKQKGAPKNESDLEALLENIHNEYGTFKKFGEVVIEEMG
                     KHVLMQDLVAKAE"
     gene            14220..14603
                     /locus_tag="PTC28_000724"
     CDS             14220..14603
                     /locus_tag="PTC28_000724"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716038.1"
                     /translation="MTYDNIVVICMGELNIKRLDEIHRLTLNEFYYRMQAQEVIALKE
                     EYNLLKLAFFIRDAAATENRGTDRNPKEYYKYASIHDIMDYQDNFHRIFEGKSRVYKI
                     GHTRAESTENDRKLAALLAEFNNRE"
     gene            14613..18440
                     /locus_tag="PTC28_000725"
     CDS             14613..18440
                     /locus_tag="PTC28_000725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716039.1"
                     /translation="MAENTDEFKIKAIFEAVVSKFEKQIDSALKKVEEFERLTGNMSS
                     VKLDADNIEVLEKVDEAKAKVEKFDNTNADAKLDVDDKVAENKIERAKRNLNILNNKR
                     VKPIIDTADKLITTKIERVKRALQFLNNKTVKPVVDMSDKLMFSKLRRVKAELQRIKH
                     EKVNISLNFKDTVAAAKIRAFKLRLKSIPNRVKSKITVDIDNKKSNIFALALSKINDR
                     SDAFSQRMDALAKSIRTFGTVGQYVLRGIMISSFSALIPVIASAIPVVMAVGNALGVV
                     AGGALGLAGAFSVAGAGLVGFGLMAKTATKMLDDGLIRSKDSTNAYRQSLKGVKKTWA
                     DIVKMNDDAIFGSMASALYGLQTALKSLKPFISGVSSAIDDNLYKFEEWVSSSKTAKK
                     AFKEMNTSGVKIFSNLLSAVGQFGDGLINIFTQFMPLFQWVSEGFNHMGQAFQKWANK
                     VSTEKGIQRFIAYTEKNLPVIGKIFGDTFLAIINLFRAFSGNSQDLFKTLSEMAGRFR
                     AWSESVGKSKAFNDFLNYLKTNGPVVASLIGNVIGALLKFVEAMAPIGAIVLQVINTI
                     VQFISNLFEAHPVIAQIIGVLMSLFGVMMSLYPAIEGVVLAVSTVAEVLGLLAGPIGV
                     VVAIIAVLIASFVYLWQTNETFRNKVMEVWNNIVSLITDAINIVWEFVMNVFGTLVSW
                     WNENHDLILQTAKTIWEYIGDTVMTAIDVIVSVLSSGFDIVVSVVEAVWSVVSTIIST
                     AIDLVLDIITLAMQIITGDWSGAWETIKSIGYTFIMGIVDIISSIFSGLISILGSILN
                     LIVSVVVGAFKYIWSFISMIISILLSIWSVGWNALKTVVLIVWDWIKSFIIAASGIVL
                     NILSAILNVIIYVWNAAWNAIKIVLVFVWNIIYTIISTAIKVVLTIILVVIGIIVTVW
                     TAFWNMIVNVLQFIWSIIGNTVMTAINFVLNIIMTVLNIIMTIWTTIWNMIVSVLSIV
                     WDLISTVISTAINYILSVIMAVLDVLLSIWSAVWNMILTVGATIWGVISSTVTSLMNA
                     MMNILQGIWNAIVSAVKTAWEFVRTMIIDKIRAAWQFVISTVRAIFIFVSSTFSNIVS
                     SVRQRMSDFFNTIKEKVESAYNAVKDFVSHFKQVGSDFINGLIDGVKDAAGNLLKAVS
                     NIAGDAVDTVKRILHIKSPSRVMREIGVYTMQGMEIGIRERGRHVISQIADVAEGVIN
                     AFDPVLNTPDFGDVTGLSQLDSKFVTDVAHHHTFEEKTSTKMVRVEMDIKNDALAAIV
                     NGINADNDATFEF"
     gene            18453..19373
                     /locus_tag="PTC28_000726"
     CDS             18453..19373
                     /locus_tag="PTC28_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail family protein"
                     /protein_id="HDK5716040.1"
                     /translation="MDVQITKLDGTSYFLSDYDIHVLDFVVESMEYEDKYAKIDGLHG
                     RYLVDSVFVKRKIAIPCLFVTDNNSDYVKQRTLLYSIVQDTEPFYIRELRKRDKNQYH
                     FHDTVAADRADSMDDAEHFEQFVDGKRYLVKLSNVLKPTQTKFSGRVELEFETVKLPF
                     AESIGTSNDLEKREHNGMWSEDMKINFDDLSYTQYTFEHVNAGNIYYHGNVALDQFNM
                     YAFVTIVIGERTDYFKWSLNDGAVMYIRGITLNSGDIITYDGVRVYCNGESVLNYAGI
                     EIPRFKPGFNHFKFNQLVAYVNFDMRFYFK"
     gene            19388..20803
                     /locus_tag="PTC28_000727"
     CDS             19388..20803
                     /locus_tag="PTC28_000727"
                     /inference="COORDINATES: protein motif:HMM:NF018329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDK5716041.1"
                     /translation="MFKIVSPQGDAYLLAVETETTHKLNGDMTLSFEVVETDDNRDFV
                     NRITKFWTVQNVGGEADLMEFVIKIARRHAVGKKQTLNCIAVAKHISDLKRKRVYDNL
                     SGSFTADRFFNTIFRGTGYNVRIVDKLYANRFENAGDGDTVLNLLQEGLKHYRAEFEY
                     IPHDRTFVITKSVKRKQPYYLKDFVNAMNFQIEEDATEFYTYAKGFGNFKDNTKFQKA
                     ALKLEYRHPLAAIIGDYEAPPVKDGRIKKRDTLYHRVKSLVDDSLKMSISLDFLMLQD
                     DFPEAVPRVGDYIPVGSQVLNLYEHVRIVEVKTKRNAKGKVISQPVILGDYKKHDRYT
                     QSVSNATSYVSRIEKGIGKDADKLNNAIRVSNTMLDFVQQLNVSDTGFSAIDGLHVTA
                     FKAKKGIVYSSDGGKTFIDLFKGSGINTAAIPVVTDQQNGLMSKEDKQKLDAMSQDGT
                     VNTGATSGLGSIFYKFVNVGE"
     gene            20806..21447
                     /locus_tag="PTC28_000728"
     CDS             20806..21447
                     /locus_tag="PTC28_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002494385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716042.1"
                     /translation="MTITKARTLTYNGEEVYARTHKDVVDGLVNATASADGLMSAADK
                     RKLDGLNQQGGTQNLSVATSTTNGLMSAADKQKLDRLNTDSVDYRAVSGSVNNSATNA
                     NASQVLHQNLNIWPNATQRVTLNKPINHCKTGIVLVWRLDTSDNLYHYQHIPKHHVEQ
                     HSAARIAEAIPTTANEICIKQVIVSNTTLVGVNENSTGSYKTTKVRLHEILEY"
     gene            21458..22456
                     /locus_tag="PTC28_000729"
     CDS             21458..22456
                     /locus_tag="PTC28_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002493689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HDK5716043.1"
                     /translation="MIKTELPTVLNDEYRKTLESNFKEIKKFMEDKGAKVDVSQTLSQ
                     FYDQLQKEIRAIVLPEESPQAVAFELDESKTDLHNVKHDSFAQRLEADFRHLKEEVKT
                     PGYVVTRNGTVMPDYREHSNIKRIHSIVCIGDSVAKGLHASKNYGQYLAEFADASLTN
                     LAVSGATFSTASDNNIVKQADKVRNADLVIVQGTDDDWLRNGGILIGTDSKDARTFYG
                     AFCTIISKIRRNNPHAKIIVMTATRQLPVNGTTIRRKDTDANSLNLKLEDYVNRQVLA
                     CTELGLPVFDAYHTSLIDPYNPAYRIKNMPDGLHPNEFAHEVIAHELLKIYDWYYG"
     gene            22475..23755
                     /locus_tag="PTC28_000730"
     CDS             22475..23755
                     /locus_tag="PTC28_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002484785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate upper protein"
                     /protein_id="HDK5716044.1"
                     /translation="MANQDLVFDITKQGVEQEKQQYIISRVGDGGLKAVTVKVLSNGT
                     PYNLTGLTPVFEGVKSDDTRIIDTQGATVLDAVNGVFRYIFPRQASTAEGEYQQAFFK
                     LKRGEQTDSTMEIRVNVLKNKVEFGINSESYFTEYQQMIENLQAEMTKALKALETTAD
                     ATKIKVKGNESLADTLRTQLKGLERSINGQHLVTQDTLREQIEGVTGSIRSLTESLAS
                     ARQELQTNIDNLGRDSVSTTVSNTPVADVADITETGYYFYDKNVTQNLPTLNSSNANG
                     YIHAVMRDRQNGMIELLGTGYMRERYRGQLYGRWVTTLPVLLWSGTGKSGNTLALNGS
                     ARQFKYLVFDLSFHTNHYATVKIRIPEGTANFYLDAFGAKTNSNVANSTLEEIELSLK
                     DDTHLQIKSAMSSSNGAAQTASNEMTIYKVYGVE"
     gene            23803..25308
                     /locus_tag="PTC28_000731"
     CDS             23803..25308
                     /locus_tag="PTC28_000731"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716045.1"
                     /translation="MKVLMNTLTAIDGTCIKQGDPSVLRFKLGDFNDDELMLDPVATV
                     YLSHENDVYRFEGTVHKDVVTFNIDKVLPAGIYTLEIECNHYIFPSDKNTRIEIVESQ
                     LGKAMSAVKSDHLYDEIIKYGVENKLFRGLLEEERAFMSESLSVSQSISASISTSFSQ
                     STSTSTSMSVSESLSTSESLSLSVSTSLSTSESISESTSISQSESISYAMSVSESVSA
                     SISNSLSASTSTSESLSLSTRTSISESLRASESESLSVSESVSLSLSTSESLSISASI
                     SESLSTSESQSLSTSASTSVSESESASISTSLSISESASLSESTALSTSLSVSQSQSE
                     SLSVSVSMSQSVSESLSVSASLSQSESESISMSVSISESISQSVSTSESLAHTPSDYM
                     VEATDNGDGTSTVTVVPKRIFRDPNGLLGMAVNNNAFDFEGKNIKKVEFDGAILFKPE
                     RVENTIYWAGVNNDSTDEVKSFISHLVTTRKITGVAEEYRSEPIKFTFINN"
     gene            25320..25754
                     /locus_tag="PTC28_000732"
     CDS             25320..25754
                     /locus_tag="PTC28_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HDK5716046.1"
                     /translation="MFTVSFTETEVFKTFFYAGEMKLLYFLMLLMALDVITGLAKAIK
                     NRKLGSRKSMFGYARKMLIFCIVILANMIDQILNANSGIVMVTIFFYIANEGLSIVEN
                     CAEMGVLIPKQIAEKLAVIGNDEHKSIIHELKEEMSDTTKRR"
     gene            25770..26717
                     /locus_tag="PTC28_000733"
     CDS             25770..26717
                     /locus_tag="PTC28_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HDK5716047.1"
                     /translation="MVKEKIGTWNGVPVYTDFLPIGTRRTGQRLVSGNPKFAVFHDTG
                     NRDSTAQNNVDYYRNTYNIDWAYTASAHVFVDDKECIICIPVTEKAWHVLYDTPIDNN
                     WYGDDANDIAFGLEACYFSDRNRTRQSLDNACRIMGALCASWGINPRNEMPGHQDIQY
                     DKQDPGNILEAAGYGRHDMHIIDDLVVKYMNGDAPAPKVAKTVSQPKQGKPPKTVWPW
                     HGIFTASEDNDDAIVVRRAFGMDAEEVDSGSWIYPGEYVEFDQVIKDVKNSMWWIRFK
                     YQADGANKKDNFYMPIGKITDKDGKLLKEKSLWGKLEVK"
     gene            27202..>27408
                     /locus_tag="PTC28_000734"
     CDS             27202..>27408
                     /locus_tag="PTC28_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001657239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716048.1"
                     /translation="MFANQSYLKINSENDVDLQNILNDYINNFCDGYFEVKVKHKNVQ
                     KFKLSFQTNNLPHLLGLHYTQKEKI"
BASE COUNT         8945 a         4054 c         6359 g         8050 t
ORIGIN      
        1 cttaccattt ttaaaatttt tattaacgat atttcttatg agagtgttca tacttttctc
       61 aactccaatc taaaattaat ttaagtatat caaaatataa aagaaaggag actaacatgt
      121 tagatagagt cacacaagtg aagaatatta aatacgatcg tgacatctcg tatgcatatg
      181 ccagtagtcg tttagccact cactggacta atcataatat gtcctggtct gaatttatgc
      241 agaaattgtc aacaacagtt agaactaaag aaagcttgtt agagtataac aagatgtcaa
      301 aaacagaaca gtcggatata aaagacgtgg gcggttttgt tggtggttat cttaaagaag
      361 gtaaacggcg tgcagggcag gtgatgaacc ggtcaatgct aacgcttgat attgattatg
      421 ctgcacatga tatggctgac accttatcca tgttttacga ttttgcttac tgtgtgtatt
      481 cgacacataa gcaccgtgat gtaagtcctc gactgcgttt agtggtacct ttgaaacgaa
      541 atgtaaatgc tgatgaatat gaagcggtgg gacgtaaagt tgcggacatg gtaggtatgg
      601 actttttcga tgatacaacg tatcaacctc acagattgat gtactggccg tcaacaagca
      661 gtgatgcaga attctttttt acttatgaag atttaccgct actcgaccca gacaaactgc
      721 taaacagcta caatgattgg acggatacat tagagtggcc aacatcctca cgtaaagaaa
      781 ataagacaaa acgtcttgcg gataaacagg gtaatccgga agaaaaacct ggtctcgttg
      841 gagcgttctg tcgtgcttat tctattgaag aagcaattga aacatttatt ccggatttat
      901 acgacgtaca cagtacaaat cgttatacgt atcatgaggg gtctactgca ggcggtttag
      961 tcatttatga aagtggaaaa tttgcttatt ctcatcacaa cacagacccg gtgagcggac
     1021 agttggtaaa tagttttgac cttattcgaa ttcacttata cggtgctcag gatgaagatg
     1081 ctaaagaggg aacgccggtc aatcggcttc caagctataa agcgatgcag acaaaagcgc
     1141 aaaatgatga aaaagttaag caacagttaa ttaacgataa aatgacagct gcaatggaag
     1201 attttgacga ggttgatgtt gatttgtcgg cgtggcgtgg aaatcttgaa gtgaatgcaa
     1261 atggggattt taaagcaacg attccaaata ttgaaaacat attatgtaat gatcctaatt
     1321 tgaaaggaaa aattgtattc aatgaattta caaaacagat tgaatgtaca gggcgtgtac
     1381 cttggaataa aagtattaaa atacgtcagt ggcaagatgc agacgatagc gctttaagag
     1441 gctatcttga aaaaatttat gagattcatc atgcaggcaa aacaaaagat gccatcatca
     1501 gtgtggcatt acaaaatgcc tatcatcctg ttagagacta tctgaatacg ctcgtttggg
     1561 atggcgtgtc acgtttagaa cgtctattta ttaaatattt aggtgttgat gacactgaag
     1621 taaatcgtgt agtaactagg aaaactttgg ttgctgcagt agcgagagtg atgaatcccg
     1681 gatgtaaatt tgactatatg cttacgttgt atggcccaca aggagtaggg aaatcggcca
     1741 tacttaaaaa gctaggtggc gcttggtttt cagatagttt agtttcggtg actggaaaag
     1801 aagcatacga agcattgcaa ggtgtgtgga ttatggagat ggccgagctt gcagcaacac
     1861 gtaaagcgga agttgaggca attaagcatt tcatatcaaa acaaattgac cgtttccgtg
     1921 tcgcgtacgg acattacatt gaagattttc cacgccaatg tatattcata ggcacgacaa
     1981 ataaaattga ctttttaaag gacgaaacag gtgggcgacg gttttggcca ttgacagtta
     2041 atcctgataa ggtcgaggaa aattggtcac aattaacaaa agacgatatt aatcaaatat
     2101 gggctgaagc taaatacttt tatgaacaag gagaagactt atatttaagt tctgagcttg
     2161 aaaaagaaat gcgtgctatt caaagtaagc atactgaaga atcaccgtat gtcggtattg
     2221 tagaggaatt tttaaatacg cctattccta gcaattggaa tgagttaagc atttttgaca
     2281 gacgacgttt ttatcaaggg gatgtggaca tgctgccaac tggtaaagtt gattacgttg
     2341 aaaggtataa ggtgtgcgca ctcgaaatat ttgttgagtg ctttggtagg gacaaaggag
     2401 atagtagagg gtcaatagag cttagaaaga ttaacagtgc tatcagaaat ataggcagtt
     2461 gggaaccata cgaggggagt aatactggaa aaatgagatt cggaaaagat tatggggtcc
     2521 aagtagctta tgtcaaaagt gacatcaata atgaattatt ataattttta gtgaatttat
     2581 atacggtaat aagtgttgca tcgagatgtt gcattaaaat cggtaatgca acagaggtaa
     2641 tgacatttta caccggcatt gttgctagtg ttgcattaga tttttttgat gcaacacatt
     2701 gatgcaacat ttgggaccat tgataataaa gggttttagg ttgtttgttg catttgttgc
     2761 atcatattta cttaatagga ttaataataa aaataggcaa tagtaagtaa taatagtgcc
     2821 cctctaacac tatataaata taataagtgg ttttttgacg caacaaatgc aacgccttat
     2881 aaattttata tgcattatac aggtgaacgt atgaaagaaa caaaattaga acagtatctt
     2941 gttaaagaga ttaaaaagga aaatggttta tgtttaaagt gggtgtcgcc aggcacgaaa
     3001 ggcgtaccgg accgaattgt tattatgcca ggcggaaaaa cctattttgt tgaaatgaag
     3061 caaaataaag gccgtattga tccgttacaa aagtatatgc ataaacaatt taatcaaaga
     3121 ggccataagg tttatgtttt atggacaaaa gaacatgtga acgaatttgt aaataaagta
     3181 ggtgatagaa gtggcgataa aatttaaacc tcatgcttat caaaagcatg cgattgataa
     3241 agtgatagaa aatgaaagat tcggtttatt tttggatatg gggttaggta aaacagtatc
     3301 aacattaaca gcgtttaaag atttacaatt attggacacg gacaagatgc ttgtcattgc
     3361 accaaaacgt gtagcgaaag agacatgggc ggatgaaatc aaaaagtggg tgcatctcaa
     3421 tcatttaaaa gtggcattag tgttggggac acctaaacaa agaatagcag cactcaataa
     3481 agaagctgat gtgtatgtaa ccaacaaaga aaatacgaaa tggttatgtg actattacgc
     3541 taaagaatgg ccgtttgaca tgatagtaat cgatgagcta tcaacattta aaaatccatc
     3601 tagtcagaga tttaaagcta ttggaaaaaa gctcccttta gttaaaaggt ttataggatt
     3661 aaccggaacg cctagcccca atagtttatt agatttgtgg gcacaaattt atttgattga
     3721 tagtggtgaa aggttagaaa aatcttttag taagtatcgt gaacgttttt ttagaccaac
     3781 tcacaaacta agcccgtatg tttttaattg ggaattaaaa gatggttcag aggggcttat
     3841 atacaaacag attgaagata tttgtttaag catgaaagcg agagactatt taaaaatgcc
     3901 tgaaagagta gatacaaaac aggtcgtgac tttgacaagc aaagaacgta agctatatga
     3961 cggtttagaa aagcattata ttttagaatt tgaagaagat gggacaatcg tcgcacaaag
     4021 tggtgcagca ctgagtcaaa aactactaca gttatcgaat ggagcggttt atactgatga
     4081 taacaacgtt agatgcatac acgaccagaa acttgataag ttggaagaaa tattagaaga
     4141 agcgcaaggg caaccgattt tattgtttta taactttaaa catgataaag acagaataat
     4201 tgagcgtttc gaagatgtta taactttaga tgatcctgaa tataagtcta aatgggagac
     4261 aggcaaagca aaattattga ttgcgcatcc tgcaagcgca ggccacgggt taaacttaca
     4321 agacggcggc catattattg tctggtttgg gctaacgtgg tctttagaat tatatcaaca
     4381 agcaaacgct aggctttata gacaaggaca acaacataca acgattattc atcatattat
     4441 gaccgataat acaatagacc aacgtgtgta cagtgccctt cagaataaaa agcttactca
     4501 aaatgaatta atggaagctg ttaaagctag gatactggaa ttaaaagatg aataagtatt
     4561 ttgaaaggag caacttatgt taagaaaatc aacaatcaat tatttagaaa gtgaattaag
     4621 gggctaccca tacttagaaa aagacatagc aagagttcgc gaagagatac ttcatccatg
     4681 gtcacccaaa gatgaaaatg taggtggcgg acgagctgac acagtaatgt gtgtcacgga
     4741 agttcgcgcg acaagtgtca taaatgatag acgcttagcg cagctcacac gtgttaagtt
     4801 agcgattgag attgtttata atcatacgac ggatgaaggg cgtaagctaa tggatttgta
     4861 ctattttaca aaaccccgta cgctcaattt gactggagtc gctaacgctt tacacattag
     4921 taagacggtt gcttacgatt tacgtaaagg tatattatca atgttagctg acgaattagg
     4981 gataattcac tgagcggaaa atttccggaa aaatagcatg ggttttcgtt gtattatgat
     5041 agtgtacaga aatgtacaga gtgctggttg aaatgcataa gacatccttt caataatttc
     5101 ttttcgactc atgtttaatc ctcctatatg tttaaattga gacggttaag gcgcccttga
     5161 ggcgtctttt ttattaaatt tttaaagcaa ttagcgtgag agttggtgat atatgaaatg
     5221 aaattaacaa ttaagcaaga aagattagta gatgaatatg ttaaaacagg caatgcttat
     5281 caatcggcta tcaatgcagg atatagtaaa agttatgcaa gagtggatgt tcataaagtc
     5341 ctcgcaaaac ctagaataaa gcaagcgata gataatcgtt tagcccaact caaaaaagag
     5401 agtatcgctg accaggacga aattttgcaa tatctcacat cagtcatgcg aggtgaaagt
     5461 actgagcaaa ttttgcgtaa tgtaggtgaa ggttatcaag acattgacaa tattgatgtt
     5521 ggcgcaaaag acaggattaa agcggctgag ttattaggta agcgttatat gatgtggaat
     5581 ggtaaacaag ttgaatcaca agagtctaaa cttgagacgt tgattaaaca gaataggcaa
     5641 gtgatcagcg atgaataaac tgagtcatca atttactgat aagcaatttc aaatttatca
     5701 agaaatcatg aaaaaggatt ggtttttatg tattctctat ggcgctaaac gaacaggtaa
     5761 aacgattttc aataattaca tgtttttgga ggaagttttg aatgtacgtg agcgagcaac
     5821 aaagttaggt attagaaacc cacaatacat tttagcaggc tacacattag ggacgattca
     5881 aaagaatgtg cttgaagaat tgacgaatat gtatggactt gaattcacat ttgataagta
     5941 taatcgattt aagttgtttg gcgtgacaat agtgcagacg cctcacggga atgtaaaagg
     6001 ccttgcagca atacgtggta tgacggcttt cggggcttat atcaatgaag catctttggc
     6061 tcacccctct gtatttgatg agattaaatc acgttgttct ggcgaaggtg ctcgaatact
     6121 ttcagataca aacccagata accctgaaca ttggttattg aaagattaca ttcaaaatga
     6181 tgatgagtcg attatcagtt atcactttga gttagatgac aacacgtttt tgtctgagcg
     6241 ttatcgtaaa aacatcaaag cgacaacgcc gagtggaatg atgtacgaca ggaatatatt
     6301 agggttgtgg gtatcgggcg atggtcttgt gtatcaagat tttgataaaa agatacacac
     6361 gatgacgcaa gatgaattaa agcagatacc gatgaaacaa tactttgcag gtgtcgactg
     6421 gggatatgaa catcatggtg tgattgttgt gtttggtatg ggctatgatg ataggtttta
     6481 tttgattgaa gaacatgcaa agcagcacgt tttcattgag gattgggtac gtatcgcgca
     6541 tgacattaaa gcgcggtatg gtgacattcc tttttattgt gactcagcac gttctgaaca
     6601 tgtggctaag tttgacgaag agggtattaa cgctatcttt gcagacaagc ggattatgcg
     6661 gggtgtggag ttagtcgcac actattacaa aaataatagg atacgcattg tgtatgacgc
     6721 ttgtcctcga tttgcgtcag agatttataa ttatgcgtgg gacactaaaa aagatttacc
     6781 gattaaagaa tacgatgatg tgatggatgc gatgcgttat gccttgctca cgtttgtaga
     6841 aacattcgaa caaagaagtg ttgaagatga aattgattta attcaacaat taggaattta
     6901 ggtgatattg atgaggttta aacctgacag taatttaata tttacgtgta aagacgttga
     6961 tgatttgtta gccaaaaatg gcgaaaaatt gttaacgttt tttaatttgc atcgagatca
     7021 gcaacgtcct cgattacaag agctgctcga ttattatttg acgaataaca gagggattaa
     7081 caagcgtgag ggacgtgatg agccttatgc agattatcgt attgcacatg cgtttgtgaa
     7141 gaatggcact gattttattc ggggctacat tggcgggaat gaaatcactt tccgcgatga
     7201 aaagtataac gaagaaattc aaaatattaa tgatttgaat gatgcacatg tgacgaatgt
     7261 ggagatttta gaagactgta ttatctatgg ccgtgcgtat gagattgtgt atcgtaatac
     7321 ggacaatcaa gacatcttta agcgtttaga tccaaagaat gtatttgtga tttacagtaa
     7381 tgatattgaa gtcgaaccag ttgcagcagt acgttatcgt tctgaaaaaa taaacggtaa
     7441 agatgtgacg ctgattgatt tgtatacagc aagttatcgt gcgtatttct atattgatga
     7501 taaccgttta attgcgcgtc aagatatgcc acaggaagtg aatatgcatc agatgttaca
     7561 aattcacgag tacaatgcga acaggttcag acaaggtgtg tttgagaacg tactcgattt
     7621 aatcgatgcg tatgattatg cggaatctga tacagcgaac tacatgaccg atttgaacga
     7681 tgcgatgtta aaaattgaag gacatcttga tttgaagctt gaagaagtga aaaagatgcg
     7741 taagtcacgt atcatcctcg ctaagacaaa agcggatgca tcaggccgta tgggtaatgc
     7801 gaatgtggac tttatttata agcaatatga tgttgcgggt gttgaagcgt ataagaaacg
     7861 tattcaaaag gatattcata agtttacgaa tacgcctgat ttatcagatg agaactttgg
     7921 cggtgtgcag tcgggtgagg cgatgaaata caagttgttt gggctcgaac agttacgctc
     7981 aacaattgaa aggcagttga cgaaaggttt taaacgtcga tttgcgatta ttcagagtgt
     8041 gagaaatcaa ctgaacgacc cgattgattt gtcacatatg cgcattgaat ataagccgaa
     8101 tatcccacaa tcgctatcag agtatgcgga catctttatt aaacttggtg gccgtgtcag
     8161 tcaagagacg ttgttatcgt ggttaccgaa tattgagaac ccgaaagaag aacttgaaaa
     8221 agtgaaagcg gaggaacaag ataatcacga ctaccacgac gtcatgccat tgcaacaaga
     8281 gaaagcagat atgaacgatg tcgaacttga gtgattactg gttagagcgt gctcaacaag
     8341 cgattcaatc tgagactttg gaagatgctg cgaaagtggc tgaaattgaa cgtatcgttg
     8401 cgatgatgat tgcggacatc tacaaaaact tattagcgta ttatgccaaa cttgcgacgg
     8461 ctgaagggat tgattgggga gaagcaaagc aaatcgcgga taagtttgat gttgaagcgt
     8521 tccaaatgca agcgaaagcc tatgttgaaa ataaagactt tagtgataag gcgaatcaag
     8581 agttaaaacg ttttaacaca acgatgtatg taaaccgtga gcagttatta aagcatgagc
     8641 tcggtttgat tgtcacaaaa ggctatgcag aacaagagaa cgtgattaac aaacatctcc
     8701 atgatagtgt gacacgtaca ttgagacatc aagcgggcat attaggtgct gatgtgcatg
     8761 tgaagcagtc agatgttgaa gcgattgtgt attctaactt tggcaagctg aattggtctg
     8821 agcgactctg gaataatcaa gatgaactca gaaaagatgt tgagcggatg gcaagccatg
     8881 tgatgctgcg gggacgtcat ccatatgagt ttgtgccaga aatacgtaag aaacaacagc
     8941 agacagtcgc taatacgaaa aggttattga ttaccgaagc tgcacgtgtg caaacggaag
     9001 cgcagaaatt gcactattta gagacgatag gaaaagatgc tgaatatgag tttgtggcga
     9061 aacgtgatga aaagacatct aaaatctgtc gtcattatga taagaaagtg tttaaagtga
     9121 aagacatggt gcctggtgtc aatgctccgc cgatgcaccc ccattgtcga agtacgacag
     9181 taccacatgt aggtaactgg cgtgataagt ttttcaaaga cagacaaggg aaatatcgat
     9241 tgaaagatga agacgctcag gcgatagata cgaacaattc aaattctaat gagcaagaac
     9301 cattcggact caataaacgt aataagaatg atgagtttaa agttgatgtg aaatacattc
     9361 aatccaatga gtatcgaaga aagtttgata agatttcgga taataaagta ttgaatcgca
     9421 atatatatca agcggctaaa gagatgcttc aacatagaaa tggtgacgat agagaagatt
     9481 tatatgggtt tgacgaaaaa acaggaaaaa tgttatttaa gagtattgaa aataaaaata
     9541 ataagtctaa ggtctattac actaaaaaca tagagaaaat agtggaaaaa aatccgtatc
     9601 aaattatatc tgtacacaac catcctagaa gcactttgcc gagcgttggc gatttaacag
     9661 ctcaacattt aaggaaatat gctaaaggta taatagttgg tcataatgga aggctgatag
     9721 tttatagtgt taataaagat gttgatttta atttcttgaa ggttagtatt aactcatcat
     9781 taaaaaaggc tcaaatgaaa tataatacgt ctgaaaaaat acatgaagat atgttgagta
     9841 gccttaaaaa acttggactt attaactata gaggaatata atgaagaaaa ggagggtatt
     9901 ttatgaaaaa ggaacttgat tatgaaaaac tcaatagaat aaaggcggat ataatagaaa
     9961 cagcaaaaaa tataaaagta cctgatgtag aggatggtcc ttttgaaaca ttcgaatctc
    10021 cagaaggttt cgacgactta acagacgaag aaatcagata tttagccttt ggaattaaac
    10081 ctgattaagc acctgatgaa acagtaaatc attcatccag gtgctctttt tatacccaat
    10141 tttaagcgac tgtgctgcag tggctttttt tattgcccaa accgtgctta tggcgttaaa
    10201 aggtgcaagt gtagtccaca ccatgcaatg acataaaact tgcaagagta gatttaaatg
    10261 aggtgcgaga aatgaaagaa caatggttaa agttaagctt acagtttttt agtgatgcag
    10321 gtacagatgg tgaagcagta gcagaacaag ctgatgtgag tgacgctcaa gctgaagagg
    10381 tcgaagatac cgaacaactg actgaagcac aattgaagtt agtgaatgat cgtgtgaatg
    10441 cagagatgca acgccgtacg aaagagatgc gtcaacagat tcaagatgaa ttgactgaga
    10501 agcaaaaaga agcggataaa cttcgtaaga tgaatgccga acaaaagcat cagtacgaac
    10561 ttgagaaaac ggaaaaagag cgtgacgatt ataagaagca acttgaaacg tataagatgc
    10621 gacaagaagc gacgtctatg ctcaatgatg cgggtatgca tgtccctgat gcattactgg
    10681 atttagtcgt gaaagagacg gctgaagaca ctaaggcgac ggtcgatagt tttgtagcgt
    10741 tagtgaatca agaagtacag cgtcaactag aaagtaaagc aacacaaagc catgtcgttg
    10801 ggaaccatgt gcgtacacca gaagtggaag aggcttggaa aacattttta aattaagaaa
    10861 ggttgaatga agtatgaaag aaaaaatgaa attacgttta caattttttg ctgatacggc
    10921 tacaggtggg actggaacac ctgcagcagc aacacaaacg aaagtggcac tgggtgaaac
    10981 gaaattaaaa gaaaagcaca ccggtattgt taaatcggta actgatgcaa agtcttatgc
    11041 gacacctgca ttgattactg acgatgcaat ttatatggaa ggtcgttcgt ttacggtcat
    11101 gaaaggtgat gtggctgaat tacgtgacta cgaccgcaca caagcgaacg atttagatag
    11161 cccgaaaatt actgaaacaa cttacttctt agatcaagag aagtattggg gtcgttttat
    11221 tgatgcgctt gataaacgtg atactgaggg caatattgat gtgaactatg tggtggcacg
    11281 tcaatccgct gaagtggtcg cgccgtattt agataattta cgttttaaaa atattgctca
    11341 gaatgcaaaa gagcatattg cggttgctgc taaaaaagaa tacgatgcga ttttggctgt
    11401 cactgaaaaa atgacggatg atattgcgcc aacaaataga acgttatttg tatcgcctgc
    11461 gttctacact aaaattaagc agttagttat tgcgttgcca caaggtgata acaagcaaca
    11521 agtattaagt caaggtgtac aagggaaaat tgatggtttt actgttgtcg ttgtcccgac
    11581 taagttcttg caaggtgttg aggcgattgc agttgcaggt caagtgtgtg cgtcaccgct
    11641 tcaagtgaat cagacaaaaa caaatagcaa tattccaggt cgcttcggtg agtctgttga
    11701 acaattgcta tacacaggtg cgtttgtacc ggaagagtta caaaaattca tctacacgct
    11761 tggtggcaca gcagtaacac ctaaaaaaga tggggttgat gttcatcaat aataaaaagt
    11821 aggtgattaa agtgaagact tttctggata aagtcaaaaa gcgcattggc attgaggatc
    11881 acttacaaga taagttgttg tgtgaaatta tcacaaatgt agtggatgag ttgaagctcc
    11941 gtttaccaaa agaacaagcg tttattccgc aaccccttta ctttattgtg attgaggttg
    12001 cggtgaagcg ttataacaag gtaggttctg aaggtatggt gtcggaaagt gttgaagggc
    12061 gttcaatgtc gtatgaagaa gatgacttca agcaatatga cggctttatt aataagtttt
    12121 ttgatgatgg ttgcggagag gtgttgttct tttgagatac gataagcgtg ttgatttcac
    12181 cattgaagaa atcgatgaat acaacccgga tacatccaaa tacgataaaa agattgtcaa
    12241 aaaatggcca acaatgcctt gcaacattaa tccgttgtca acttcaaaga ctgttttaga
    12301 gtttggcgac gtgacgaaag agattaatgt attgcgcatt caccgaccta ttggtgagcg
    12361 tccgacacat gcatatgtaa atggtgttaa gtacacgata atcaagaatg ggttgtcatg
    12421 gttttatgta gaggaagtgg ttaatcgtga gactaagcgg aataactgaa ttgaagcgtg
    12481 tgatgaagaa catgagtcgc attggagatg atgtggctga gataatggct ggtcactcta
    12541 gcgacgctgt gggtattgct gttgataacg cgaaggaagt catgaataag gggtattgga
    12601 ctgggaattt agcacgtgag atatccagtg agatgacgac taagctatcg tttatgttga
    12661 tttcaggtgc ctattattca ggctttttag aatatggtac gcgttatatg gcggctgaac
    12721 catttatgca accgactgtg aaaataatta aaaataaatt aagagatgat ttctctgaat
    12781 tattgagtgg ataggtggaa ggtacgcatg ttatcaccac agttacaaat ttataactat
    12841 gtttttaaaa agctgcaagg atatggcgcg tctgtcattg gtgttaaaga tatcaaacgg
    12901 acaataccat atccttttta tatggtacaa cgcagtcaaa atacgaaatc gcatgagacg
    12961 cttgatatgt actcaggtaa catcagctta atgattcatc tatatagttt agctgatgat
    13021 gagttgaagc atgataagta cttgcgtatt gcggataaaa tcgtgtcgtc accgtttaat
    13081 ctggacgggt atcaagtggt gacactcagt gtggatttta agacgttgat tgacaatacg
    13141 acaaacgcgt gtttattgca cagtgtcttg actgtagaat ttaaagttta ttgaggagtt
    13201 gatatatatg gaaattgtac aaggttccga tattttaatt ttagcgcgta agcttggaga
    13261 caagaaaaac gcgaataaag tcattttagg gaaagaatat aaaatcagtt ctgaggcaga
    13321 tagtgatact gttgatactt ttgatggttc gtttgaaaca ggcggctcta aaaagacgac
    13381 tgtaggtatt acggcgctga tgaaacgcgg tgataagttt gcagaaacga ttgaatcgag
    13441 cttaggtaag gttaaatatg aattgtggtt aatcgacatt aaagacttag gtacaggttc
    13501 tgactctaat aaattccgag cacgttactt acaaggcatc tttaaaaaat tcgatcagaa
    13561 aattgaaacg ggtaacgcag tggagtatga ggttgaattt aatgagtcgg gcggcggatt
    13621 gaaatatggc tatgcgacat tatccgctga gttgaaagca acgttagaaa atgcaggata
    13681 caaattccac gatactttag cgtctgaccc tggcattgac gaaaaagcgt ctacgtcagc
    13741 tactgctaca tctactgctg atagacaatc aacagcacaa gcgtaagaat atggcgggtt
    13801 ctcccgcctt tttaaataca ataatttata tgaggtgttt atatgttaac agttaatttt
    13861 aatcaaacag aattagaaat ccactttggc ttaggtgaac ttactgagat tgataaagag
    13921 ttaggttttg atgtacgtga tgttaagctc ggtgaaggat tagaaatgtt agtccctaag
    13981 ttacagacgg gtaacccgat tgcaatcgca aaaatcgtgt tagcgacgac tcgtaaacaa
    14041 aagggcgcac ctaaaaatga aagtgaccta gaagcactgc ttgaaaatat ccacaatgaa
    14101 tatggcacat ttaaaaaatt cggtgaagtc gttattgagg aaatgggaaa gcatgttttg
    14161 atgcaagacc tcgtggcgaa agcagagtaa caagtaataa taacacccgt caattaaaaa
    14221 tgacatatga taatatcgtt gtgatttgta tgggtgaatt gaatattaaa agattagatg
    14281 agattcatcg tctgactttg aatgagtttt attatcgtat gcaagctcag gaggttatcg
    14341 ctttaaaaga agagtataac ttgttgaagc ttgctttttt tataagagat gcagcagcga
    14401 ctgagaatcg tgggactgac aggaacccga aagaatatta taaatacgct tcaattcatg
    14461 acattatgga ttatcaagat aatttccatc gtatttttga aggtaaatcg cgtgtgtaca
    14521 aaataggtca tacgcgtgct gagtcgactg aaaacgatcg taagctcgct gcactgttag
    14581 cagaatttaa taatagagag taggtgaggg atatggcaga aaacacagat gagtttaaaa
    14641 ttaaggcgat atttgaggcg gtcgttagca aattcgaaaa gcaaattgat agtgcgctca
    14701 aaaaagtaga agagttcgag agattaactg gcaatatgtc atctgtaaaa ctcgatgctg
    14761 ataatattga ggtgcttgaa aaagtcgatg aagcaaaagc gaaagttgaa aagttcgata
    14821 atacgaatgc agacgctaaa cttgatgtcg atgataaggt cgctgaaaac aagattgaac
    14881 gtgcgaaacg taatttaaat attctcaata acaaaagagt aaagcccatt atcgataccg
    14941 cggacaagtt aataactact aaaatagaac gtgtgaaacg tgctttacaa tttttgaaca
    15001 ataaaacagt caagcctgtc gtggatatgt ctgataagtt aatgtttagt aaattaagga
    15061 gagttaaagc tgaacttcaa cgtattaaac atgaaaaagt caacatatca ttgaacttta
    15121 aagatacggt tgcagctgca aaaattcgtg cttttaaact ccgattaaaa agtattccta
    15181 atcgtgtcaa gtcaaagatt acggttgata ttgataataa aaaatcaaat atctttgcgt
    15241 tagcattaag caaaataaat gacagatcag acgcttttag tcaacgtatg gatgcactcg
    15301 ctaaatcaat tcgaactttt gggacggttg ggcagtatgt tcttcgcggg ataatgattt
    15361 cttctttttc ggcacttatt cctgttatcg caagtgcgat accggtcgtt atggcagtag
    15421 gtaatgcact cggtgttgtt gcaggtggtg ctttaggttt agcaggagct ttcagtgttg
    15481 cgggtgctgg tcttgtaggc tttggtctga tggctaaaac agccacaaaa atgcttgatg
    15541 acggtttaat acggtcaaag gattccacta acgcttatcg gcaaagctta aaaggtgtta
    15601 aaaaaacatg ggcagacatc gtcaaaatga atgatgatgc tatattcggt tcgatggcat
    15661 cagcattgta tgggctacag accgcattaa agagtttgaa accatttata agcggcgtat
    15721 ctagtgcgat tgatgataac ctgtataaat ttgaagaatg ggtttcatcc tcaaaaactg
    15781 cgaaaaaagc ttttaaagag atgaatacat caggtgttaa aatcttttca aatttattga
    15841 gtgctgtcgg tcagtttggt gacgggttga ttaatatatt cacacaattt atgccgctgt
    15901 ttcaatgggt gtctgaaggt tttaatcata tggggcaagc gttccagaaa tgggcaaata
    15961 aagtatctac tgaaaaaggg attcaaagat ttattgcgta cactgaaaag aatttgccag
    16021 ttatcggtaa aatttttggt gatacatttt tagctattat caatctgttt agggcgttta
    16081 gcggtaattc acaagattta tttaaaacat tatctgaaat ggcagggcgc tttagagctt
    16141 ggagtgaaag tgttggtaag tcaaaagcgt ttaatgattt tctgaattac cttaaaacga
    16201 acggaccagt tgtcgcctca ttaatcggta atgtgattgg cgctttactg aaatttgttg
    16261 aagcgatggc gcccattggt gcaattgttt tacaggttat taatacaatc gttcaattta
    16321 tatccaattt gtttgaagcc catcctgtaa ttgcacaaat tattggtgta cttatgagtt
    16381 tgtttggtgt gatgatgtca ctttatcctg caattgaagg agttgtgctc gcggtatcga
    16441 cagtggcaga agtattgggt ttattggccg gtccaattgg tgttgttgtt gcgattattg
    16501 ctgttttaat agcttcattc gtctatcttt ggcaaacaaa tgagactttc aggaacaaag
    16561 tgatggaagt ttggaataac attgtgtcgc tcattactga tgcaatcaat attgtgtggg
    16621 aatttgtgat gaatgttttt ggtactttgg tgtcttggtg gaatgaaaac catgatttga
    16681 ttttacaaac agcaaagacg atttgggaat acatcggtga tacagtgatg actgccattg
    16741 atgtgattgt gtctgtacta tcatctgggt ttgatattgt tgtgagtgtt gtagaagctg
    16801 tttggtcagt tgttagtaca attatttcga ctgcaattga tttagtgcta gatattatca
    16861 ctttagcaat gcaaattatc acaggtgact ggtctggggc gtgggagacg attaaatcga
    16921 ttggctacac gtttattatg ggcattgttg atattatttc gagcattttt tcaggtttaa
    16981 tcagtatttt aggtagcata ttaaatttga tagtgagtgt ggtcgtcgga gcgtttaagt
    17041 atatatggtc atttatttca atgatcatta gtattttact ctcgatttgg agcgtcgggt
    17101 ggaatgcatt aaaaactgtg gttttgattg tgtgggattg gattaaaagt tttattatcg
    17161 cagcgtcagg aattgtactc aatattttat ctgctatttt aaatgtaatt atttatgttt
    17221 ggaacgctgc ttggaatgcg ataaaaattg ttttagtgtt tgtttggaat attatctata
    17281 ctattatttc tactgcgatt aaagttgttt tgacaattat attagttgta attggtatta
    17341 ttgtgacagt ttggacggct ttttggaata tgattgtgaa tgtgcttcaa tttatctgga
    17401 gtattatagg taacacagtg atgaccgcga ttaattttgt gcttaatatt atcatgactg
    17461 ttctcaatat cattatgaca atttggacaa caatttggaa tatgatcgtt tcagttttaa
    17521 gtattgtctg ggatttgatt tcaactgtta tttcaacagc aatcaattat atattaagcg
    17581 ttattatggc tgttttggat gtattattaa gcatctggag tgctgtatgg aatatgatac
    17641 ttacggttgg agcgacaatt tggggcgtga tttcctcaac agtgacgagc ttaatgaatg
    17701 cgatgatgaa tattttacaa ggtatctgga atgctatcgt ttccgcggta aaaaccgctt
    17761 gggaatttgt acgtacgatg attatcgata aaatacgtgc tgcttggcaa ttcgtcattt
    17821 ccacagtaag ggcgattttc atctttgttt ctagcacgtt tagcaatatc gtgagtagtg
    17881 tgcgtcaacg tatgagcgac ttttttaaca caatcaaaga aaaagttgaa agtgcttata
    17941 atgcggtaaa agattttgtt tcgcacttta aacaggtagg gtcagatttt attaatggcc
    18001 ttatcgatgg tgtgaaggat gctgcaggta atttactgaa agcagtgagt aatattgctg
    18061 gtgacgctgt ggatacagtg aaacgtatac ttcatatcaa atcaccttcc cgtgtgatga
    18121 gagaaatcgg ggtctatacg atgcaaggta tggaaatcgg tattcgtgaa cgtggccgac
    18181 atgtgattag tcaaatcgct gatgttgctg agggtgtgat taatgcattc gaccctgtgc
    18241 tgaatacacc agattttggc gatgtcactg gactcagtca attagattca aaatttgtca
    18301 ctgatgttgc gcatcatcat acgtttgaag aaaagacgtc gacgaagatg gtacgcgtcg
    18361 agatggatat taaaaatgat gcgcttgctg caatcgtcaa tggtattaat gcggataacg
    18421 acgcgacttt tgagttttaa ggaggtggtt ttgtggatgt tcaaattact aagctcgatg
    18481 ggacgtccta ttttttaagt gattatgaca ttcatgtgtt agattttgtg gtagaaagta
    18541 tggagtatga agataaatat gcaaaaattg acgggttaca tggtcggtac cttgttgatt
    18601 ctgtgtttgt taagcgtaag attgctattc catgcctttt tgtgacagat aataactcag
    18661 attatgtcaa acaaaggacg ctactttata gtattgttca ggacactgag cctttttata
    18721 ttcgagagtt gcgtaagcgt gataaaaatc aataccattt tcatgatacg gttgcggctg
    18781 accgtgctga ttcaatggat gatgctgaac attttgagca atttgttgat ggtaagcgtt
    18841 atttggtaaa gttgagtaat gtgttaaagc cgacgcagac aaaattttcg gggcgtgttg
    18901 aattggaatt tgaaacggtt aaattgccgt ttgctgaatc gattgggacg agtaatgatt
    18961 tagaaaagcg tgaacataat ggtatgtggt cagaagacat gaagattaat tttgatgact
    19021 tgtcatatac tcaatatact tttgaacacg tgaatgcagg taatatttat tatcacggta
    19081 atgttgcttt agaccaattc aatatgtatg cttttgtgac gattgttatt ggtgaacgga
    19141 ccgattattt taaatggtca ttaaatgatg gtgcggtcat gtatattcgg ggcatcacgt
    19201 taaattctgg tgatattatt acctacgacg gtgtacgtgt atattgtaat ggtgaatcgg
    19261 tgttaaatta tgcggggata gagattcctc gtttcaaacc tggtttcaat cactttaaat
    19321 ttaatcagct tgttgcgtat gtcaattttg atatgcgctt ttattttaag taagaggagg
    19381 agtcgtattg tttaaaattg ttagtccaca aggtgatgct tatttgttag ctgtagaaac
    19441 tgaaacgacg cataaattaa acggtgatat gacgctttct tttgaagtgg ttgaaacaga
    19501 tgataatcgt gattttgtga atcgcattac taagttttgg acggttcaaa acgttggtgg
    19561 tgaagcggac ttgatggaat ttgtcattaa aatcgcacgt cgacacgcgg tagggaaaaa
    19621 gcaaacattg aactgtattg cagtggctaa gcatattagt gacttgaagc gaaaacgtgt
    19681 gtatgacaat ttgtcgggta gcttcacggc tgaccgtttt ttcaatacga tttttcgagg
    19741 tactggttac aatgtcagga ttgtagataa attgtatgcg aatcgttttg aaaatgcagg
    19801 cgatggcgat acagtgctta atttgttgca ggaggggtta aagcattatc gtgctgagtt
    19861 tgaatatatc ccacatgatc gcacgtttgt gattacgaaa tcagtaaaac gaaaacaacc
    19921 gtattattta aaagattttg tgaacgcaat gaactttcaa attgaagagg atgcgacaga
    19981 attttatacg tacgcaaaag gttttggcaa ttttaaggac aatacaaagt ttcaaaaagc
    20041 agcactgaag cttgagtatc gtcatccgct tgctgcgatt ataggcgatt atgaagcacc
    20101 accagttaaa gatggacgta ttaaaaagag agacacttta tatcatcgag tgaaatcatt
    20161 agtagacgat tcgttgaaga tgtcgatttc acttgatttt ttaatgcttc aagatgattt
    20221 tcctgaagcg gtgccacgtg ttggtgacta tattccggtt ggctcacaag tgttgaattt
    20281 gtatgagcat gtgcgcattg tcgaggttaa gacgaagcgt aatgcaaaag gtaaagtgat
    20341 aagtcaacct gttattttag gtgattacaa aaagcatgac aggtacacgc aatctgttag
    20401 taacgctaca tcctatgtga gccgtattga aaaagggatt ggtaaagatg cggataagtt
    20461 aaacaatgcg attcgtgtat cgaatacgat gttggacttt gtgcagcagt taaatgtgag
    20521 tgacactggt tttagcgcga ttgatggctt acatgttacg gcgtttaaag ctaaaaaagg
    20581 tattgtgtat agtagcgatg gcggtaagac ttttattgat ttatttaaag gttcaggtat
    20641 taatacagcg gcgataccgg tagtaaccga ccaacaaaat ggtctgatgt caaaagaaga
    20701 taagcaaaaa ctcgacgcta tgtcacaaga tggcactgtt aatacagggg ctacaagtgg
    20761 tttagggtcg attttttata aatttgtgaa tgtaggtgag tagttatgac gattacaaaa
    20821 gcgaggactt taacgtataa cggcgaagag gtctatgcaa ggacacataa agatgtggtc
    20881 gatggtcttg tgaatgcgac ggcttcggct gacggcttga tgagtgcagc ggataagcgg
    20941 aaacttgacg gattgaatca gcaaggtggt acacaaaact taagtgtggc aacgagtaca
    21001 acgaatggtc tcatgagtgc agcagataag caaaaactcg accgattgaa tactgattct
    21061 gttgattaca gagcggtgag tggtagcgtt aataatagtg caacaaatgc aaatgcttct
    21121 caagttttgc accaaaattt aaatatttgg ccgaatgcga cacaacgtgt gacgttaaat
    21181 aaacccatca atcattgcaa gacggggatt gtgttggttt ggcgtttaga tacgtcagac
    21241 aatctatatc actaccaaca tattcctaag catcacgtag agcagcatag tgctgcacgt
    21301 attgctgaag cgattccgac gacggcaaat gagatttgta ttaagcaagt gattgtatcc
    21361 aatacgacgt tggtcggtgt gaatgagaat agtacaggta gttataaaac aactaaagtc
    21421 cgtttgcacg agattttaga atactgaggt gataaagatg attaaaactg aattaccgac
    21481 agttttaaat gatgaatata gaaaaacgtt agaatcgaat ttcaaagaga ttaaaaaatt
    21541 tatggaagat aaaggcgcaa aagttgatgt gagtcagacg ttatcgcaat tttacgatca
    21601 gctacaaaaa gagatacgtg cgattgtgct gccggaggaa agtccacaag ctgttgcgtt
    21661 tgaattagat gagagtaaga cggatttgca taatgtgaag catgacagtt ttgcgcaaag
    21721 gcttgaagcg gattttaggc atttgaaaga agaggtcaaa acgcctggtt atgtcgtaac
    21781 gagaaacggg actgtgatgc cggactatcg cgagcactcg aatattaaaa ggattcattc
    21841 gattgtgtgt attggtgatt ctgtggcgaa aggtttacat gcaagtaaaa actatgggca
    21901 gtatttagct gaatttgcgg atgcgagttt aactaatctt gcggtgagtg gtgccacatt
    21961 ttcgacggca agtgacaata atattgtgaa acaagcggat aaagtgcgta atgccgattt
    22021 agtgattgtg caaggtacag atgatgattg gttacgaaat ggcggtattt taattgggac
    22081 tgattcaaag gatgcacgaa cgttttacgg cgcgttttgt acgattatta gtaaaattcg
    22141 acggaataat ccacatgcga aaattatcgt gatgacagca acacgtcaat tacctgtcaa
    22201 cggtaccaca atcagacgca aagacacgga tgcaaatagt ttgaatctaa aattagagga
    22261 ttatgtgaat agacaagtgt tggcgtgtac ggagttaggt ttgcccgtat ttgatgctta
    22321 tcatacgtct ttaattgatc catacaatcc agcatatcgt attaaaaata tgccggacgg
    22381 acttcatccg aacgagtttg cacatgaagt gatcgcgcat gaattgttaa aaatctatga
    22441 ctggtattac ggttaagaaa ggtgtgttaa taaaatggca aatcaagatt tagtgtttga
    22501 cattacgaag caaggtgttg aacaggaaaa acaacaatat atcattagcc gtgtgggcga
    22561 tggtggatta aaagcggtta ctgtgaaagt gttgtcgaat ggcacgccgt ataatttaac
    22621 gggtttaacg ccagtttttg aaggtgtaaa gtctgatgac acacgtatta ttgacacaca
    22681 aggtgcaaca gtactcgacg cagtcaatgg tgtatttcgt tatatttttc ctcgacaagc
    22741 aagcacggcg gagggtgaat atcaacaagc gttttttaaa ttgaaacgcg gtgaacaaac
    22801 agattcgacg atggaaattc gtgtgaatgt gctgaaaaat aaggtggaat ttgggattaa
    22861 ctcagaaagt tactttacgg agtatcagca aatgattgag aacttacaag cagaaatgac
    22921 aaaagcgctt aaagctttag aaacgactgc agatgcgaca aagattaaag ttaaagggaa
    22981 tgagtcgtta gcagacacgt tacgtacaca attaaaaggt ttggaacgtt cgattaatgg
    23041 tcagcatctt gtgactcaag acacattgcg tgaacaaatc gagggcgtta cgggttcgat
    23101 tcgttcgttg actgaaagct tagcgtcggc aagacaagag ttacaaacga atattgataa
    23161 tttaggacgt gactctgtca gcacaaccgt atcgaatacg ccagttgcag atgttgctga
    23221 tattacggag acgggttatt atttttacga taaaaatgta actcagaatt taccgacctt
    23281 gaatagtagc aatgcaaatg gttatattca tgcggtaatg cgtgatagac aaaatggcat
    23341 gattgaattg ttaggtacgg gatacatgcg cgaacgatat agaggccagt tatacggacg
    23401 ttgggtgaca acacttccgg tcttgttatg gagcggtaca ggtaaatcag gtaataccct
    23461 tgcgctgaat ggtagtgcac gtcagtttaa gtatctagtg tttgatttat cgttccatac
    23521 caatcattat gcgactgtta aaatccgcat tccagagggc actgcgaatt tctatttaga
    23581 tgctttcggt gctaaaacga attcaaatgt cgcgaattcg acgttggaag aaattgaatt
    23641 atcattaaaa gatgatacgc atctacaaat taaaagtgcg atgtcgagtt caaacggtgc
    23701 agcgcaaacc gcttcaaatg agatgacgat ttataaagta tacggtgttg aataaaaggg
    23761 tggttcgtcc atcctttttt atttggttta aggggtgatt gtttgaaagt tttaatgaat
    23821 acgttaacag caattgatgg cacttgtatt aagcaaggtg acccatctgt gttgcgtttc
    23881 aaattaggtg attttaatga tgatgaattg atgctagacc ctgttgcgac ggtgtattta
    23941 agtcatgaga atgatgtgta tcgatttgaa ggcacagtgc ataaagatgt ggtgactttt
    24001 aatattgata aggtgttgcc tgctgggatt tatactttag agattgagtg taatcattat
    24061 atttttccta gtgataaaaa tacgagaatt gagattgttg aaagtcaact aggtaaagcg
    24121 atgagtgcgg ttaaaagtga tcatttgtat gatgaaatta ttaagtacgg tgttgaaaat
    24181 aagttgttta gaggtttgct agaagaagag cgtgcgttta tgtctgaatc gttaagtgtg
    24241 tcacaatcca ttagtgcttc tatttcaaca tcgtttagtc aatctacatc aacgagcacg
    24301 tctatgagtg tgtcagaaag tttatcaacg tctgaatcgt taagtttgag cgtgtcgaca
    24361 tctttaagta cgtcagaatc gatttcagaa agtacatcga tttcacaatc ggaaagcatc
    24421 agttacgcca tgtctgtatc tgaaagcgtg tcagcctcaa tcagtaattc attgagcgct
    24481 tcgacaagta cttcagagtc tttaagtttg tcaacgcgca catcgatttc agagtcgttg
    24541 cgtgcgtcgg aatctgaatc attaagtgtg tcagaaagtg tctcattatc gttgagtaca
    24601 tcagaatcgc tgtcaattag tgcgtcgatt tcagaaagct tgtcgacgtc agaaagtcaa
    24661 tcgctttcaa caagtgcgtc gacttcagtg agtgaatctg agtcggcttc gatttcaaca
    24721 agtttatcta tatcagaaag tgcatcatta tctgagagta cagcgttatc gacgagttta
    24781 tctgtttcac aaagccaatc tgaatcgtta agtgtttctg tttcaatgag tcaatcggtt
    24841 tcagagtcat tgagtgtgtc ggcatcgtta tcgcaaagtg aatcggaatc tatttcgatg
    24901 agtgtctcaa tatctgaatc aatatcacaa tcggtttcaa caagtgaatc gctagcacat
    24961 acgccttctg attatatggt tgaggctacg gataatggag acggtacatc tactgtgaca
    25021 gtagtaccga agcggatatt tagagatcct aacgggcttt tggggatggc ggtgaataat
    25081 aacgcgtttg attttgaagg taaaaatatt aaaaaggttg aatttgatgg tgcaattcta
    25141 tttaaacctg aaagagttga aaatactatt tattgggcag gtgttaataa tgattcgaca
    25201 gatgaggtta aatcatttat tagtcattta gtcacgacga gaaagataac aggcgttgca
    25261 gaagaatata gaagtgaacc gattaagttt acttttatca ataattagag gtgattgaga
    25321 tgtttacagt gagttttaca gaaacagaag tttttaagac atttttttac gcaggtgaga
    25381 tgaaactatt atatttttta atgctcctga tggcgcttga tgtcattaca ggtttggcta
    25441 aagcgataaa gaatagaaaa ttagggagtc gcaaatcgat gtttggttat gcgcgtaaaa
    25501 tgttgatttt ctgtattgtt attttggcca acatgataga tcaaatttta aatgcgaata
    25561 gcggcattgt gatggtgacg atattcttct acattgccaa tgaaggactg tctattgtcg
    25621 aaaattgtgc tgagatgggt gtgttgattc cgaagcaaat tgctgaaaag ctggctgtga
    25681 ttgggaatga tgaacacaaa tcaattattc atgagttaaa agaagaaatg tcagatacaa
    25741 ctaaaagacg atgaggaaga ggttagaaaa tggttaaaga gaaaattggt acatggaacg
    25801 gtgtaccagt atatacggat tttttaccga ttgggacacg tcgtactggt caaaggctag
    25861 tgagtggcaa tccaaaattt gcggtattcc atgatactgg aaatcgagat agtactgcac
    25921 agaataatgt cgattattat cgcaatacgt ataatatcga ttgggcttac actgcatcag
    25981 cgcacgtgtt tgtggacgat aaagagtgta tcatctgtat acctgtaaca gaaaaagcat
    26041 ggcatgtact gtatgatacg cctatcgata acaactggta cggtgatgac gctaacgata
    26101 tcgcgttcgg tttagaagct tgttatttca gcgacagaaa tagaacacgt cagtcattag
    26161 acaatgcgtg tcgaattatg ggggcgttat gtgcgtcttg ggggattaat ccacgcaatg
    26221 aaatgcctgg ccatcaagat attcagtatg ataagcagga cccaggcaat attttagaag
    26281 ctgcaggata cggcaggcac gatatgcata ttattgatga tttagtggtc aaatatatga
    26341 atggagatgc accagcgccg aaagtggcca aaacggtcag tcagccgaag caaggtaaac
    26401 cgcctaaaac ggtgtggccg tggcatggta tttttaccgc ttctgaggat aacgatgatg
    26461 caattgttgt acgtcgtgca tttggaatgg atgcggaaga agtggacagt ggttcatgga
    26521 tttatccagg tgaatatgta gagtttgacc aagtgattaa agatgttaaa aatagcatgt
    26581 ggtggattcg ctttaagtac caagcggatg gggctaataa gaaggataat ttttatatgc
    26641 cgattggaaa aatcactgac aaggatggta agttgctgaa agagaaatca ttgtggggta
    26701 agttagaagt taaataatac gttaaaaagt tcatactata ttatatttaa gggcggtcat
    26761 tgcgactgct ctgttttttt gtgctataat tttggtgaca atgcctccac tcctttttag
    26821 gcagatacgc tctgatgtgg aggtattttt tcaaatattc agatgcctaa acaaaactaa
    26881 caaaagttta gaagtactaa aaatatttat aaagggtaaa aaaattttaa cactaactgt
    26941 tgcatatgaa acaaaaagat attatagtta tttacgaaga aagggatatc catcacgctc
    27001 tttcttgcta actaaaattc tttatcgtca agttagttct tagtagtaaa aaactatata
    27061 caattaggag tggattgtat agcccggcag aggccttata tctgactgtt ggtcccgcaa
    27121 gagacacctt cttgcctcca ctcacataca taatccctac tcactttagg taagtaggga
    27181 tatttttaag gggtgtttta gttgtttgca aatcaatcat atttaaaaat aaatagcgaa
    27241 aatgatgttg acttgcaaaa catcttaaac gattacatta ataatttttg tgacggctat
    27301 tttgaagtaa aagtaaagca taaaaatgta cagaaattca agttatcatt tcaaacgaat
    27361 aatttgccac atttgttagg gttacattat actcagaaag aaaaaata
//
LOCUS       DANHPA010000021        27052 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.021, whole genome shotgun sequence.
ACCESSION   DANHPA010000021 DANHPA010000000
VERSION     DANHPA010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 27052)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27052)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27052
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.021"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            116..247
                     /gene="graF"
                     /locus_tag="PTC28_000735"
     CDS             116..247
                     /gene="graF"
                     /locus_tag="PTC28_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycopeptide resistance-associated protein GraF"
                     /protein_id="HDK5716049.1"
                     /translation="MAEKDIKKAAEQAKDKEKELKDKTEDAKDGAEKTKDDIQKTFE"
     regulatory      1091..1190
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            1315..1890
                     /locus_tag="PTC28_000736"
     CDS             1315..1890
                     /locus_tag="PTC28_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HDK5716050.1"
                     /translation="MKKGLTLSDILVTVLVSVIFAVIYNLWWAVTNTLQPLGLHLDQL
                     MYGMWFSAAVVAYLIIPKMGIALLAEFAAGAGETIMMGRFDIPTIIYALLQGLACEII
                     FAIFRYKSRAFMVAILAGMAAAIISLPIDWYYGYLNEVATWNLILLIAFRIISGAILA
                     GVFPYLLVKALDQTGVTKLFRPASKDDYDAL"
     gene            1903..3306
                     /locus_tag="PTC28_000737"
     CDS             1903..3306
                     /locus_tag="PTC28_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5716051.1"
                     /translation="MLKVKNLRLKYPSADYKIFDGIDVEIKDKEKVLLLGPSGSGKST
                     LLNVLSGIVPNLIDLPMKYDALEIAENSGVIFQDPDSQFCMPQVNEELAFILENQQIP
                     RHDMDSRIHEALNHVGLDVNPKQRIHQLSGGMKQKLAIAGTLLQGADTLFLDEPTAML
                     DVEATENLWNLLKDLWEDKTVLIVEHKVEHIWQHVDRVILMNHHGHIIQQGTPEYIMA
                     HYESLLSEYGVWHPKAWSHAPMPQHPVQSTAQNFYFSFEEGAIQRGRRTLYEVDALHI
                     GPGEWITLTGKNGSGKTSLLESMMQLIRYKGNMHYDGQKLTKIKDAAQHMFLVYQNPE
                     LQFIQNSVFDEIWVNYHHMDSEHAKTKTEEMLALLDLEHVSSQHPFELSMGQKRRLSV
                     ATALSTNADIILLDEPTFGLDSHNTFKLIELFQSRIAQGQTILMVTHDPHIIERYPTR
                     RIEVKEGKLYEVEEVRT"
     gene            3303..4094
                     /locus_tag="PTC28_000738"
     CDS             3303..4094
                     /locus_tag="PTC28_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017464807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HDK5716052.1"
                     /translation="MIESWKTRHTFMDDVNIVTKLFLGVALFFFIIFVHHFDVMIYLA
                     TLMLIFMLLTAGTKWKVVLSFTILATFFALTSSLFMIFYGDGQHELLKFGFVNITTES
                     LVRGLHLSFRTMTVSYFGLSIAFTSQVIMIFYSLMQHLKVKPKIAYAFMAAFRMIPIM
                     LESLFQLRNALKMRYQMIDNRNYSGFKRLKHLLIPLLSQNIRKAHRLSVAMEKKGFKD
                     GPRTYYYHVPFSYKDLILIGLTVVIVILAFTFAQMLPITGITDAR"
     gene            complement(4312..5565)
                     /locus_tag="PTC28_000739"
     CDS             complement(4312..5565)
                     /locus_tag="PTC28_000739"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HDK5716053.1"
                     /translation="MHVLVVGGGGREHILAHKLNQSPLVSQVYAIPGNAAMTHVAEVH
                     GEIAESDHEAIVAFAQAHDVTWVVIGPEQPLTDGLADALRAVDIKVFGPNQDAAQIEG
                     SKSFAKRLMAKYDIPTAAYREIDQKDEAVAYIETCELPIVLKKDGLAAGKGVIIAETR
                     EQAREAVETLYPEANSKVVFEQFLEGEEFSLMTFVNGDYAVPFDTIAQDHKRAYDQDK
                     GPNTGGMGAYCPVPHMSQSVLDEANDKIAQPIAKAMQAEGHDFFGLLYIGAILTKEGP
                     KVIEFNARFGDPEAQVLLTRLESDLMTHIIELDEKAPINMKWKDDAVVGVMLASKGYP
                     GAYEKGATVKGFEDEPGAYFVSGLTHDGEHYVTSGGRVILAIGEGATIEAAQQAAYAR
                     VEKIESDGLFYRQDIAHKAIKANEY"
     gene            complement(5583..7061)
                     /gene="purH"
                     /locus_tag="PTC28_000740"
     CDS             complement(5583..7061)
                     /gene="purH"
                     /locus_tag="PTC28_000740"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HDK5716054.1"
                     /translation="MKKAILSVSDKTGIVPFAQSLVEAGYELYSTGGTFRAIDEAGVK
                     VTSVSELTQFEEIMDGRVKTLHPAVHGGILADRDKPEHLEQLKGQNIDLIDMVVVNLY
                     PFKETVKNPDVTEMDAIENIDIGGPTMLRAAAKNFKHVTTIVDPTDYDEVIQRIQNSS
                     LDEAFRKSLMIKVFQHTFEYDQAITQFFGHQLEQLRYGENPQQSAQFIRTSTAKNTIA
                     GATQLHGKQLSYNNIKDADAALSLVKQFEQPAAVAVKHMNPCGVGTGENIHAAYTHAY
                     EADSQSIFGGIVALNRPVTAELAEDLHAIFLEVVIAPKFEQAALNILQQKKNIRLLEI
                     EMTEESDATEFVSVSGGYLVQDKDRFDVAQADMTVVTDVKPTKEQWDALLLGWKVVKS
                     VKSNAIVLANDKQTVGIGAGQMNRVGSAKIAIDRAIEMNDNVVLASDGFFPMGDTVET
                     AAKAGIKAIIQPGGSIKDQESIDMANRYGIAMVTTGMRHFKH"
     gene            complement(7078..7644)
                     /gene="purN"
                     /locus_tag="PTC28_000741"
     CDS             complement(7078..7644)
                     /gene="purN"
                     /locus_tag="PTC28_000741"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HDK5716055.1"
                     /translation="MVKIAIFASGSGTNFDNIMKRVKSGELVHIEVTALYTDKPEAAC
                     VQLAQQHGIPVHAFEPRTFDDKVAYEAAVLNWLRQEGVEWIVLAGYMRLIDETLLSAY
                     EGRILNIHPSLLPKYKGKNAVGQALNSGDKETGSTVHYVDAGMDTGQMIEQRTCPIYE
                     DDTQQSLEERIKSLEYELYPAVIKKIIR"
     gene            complement(7644..8675)
                     /locus_tag="PTC28_000742"
     CDS             complement(7644..8675)
                     /locus_tag="PTC28_000742"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HDK5716056.1"
                     /translation="MAESYKKAGVDIEAGYEAVKRMSSHVERTMRKEVLGGLGGFGAT
                     FDLSQLNMKAPVLVSGTDGVGTKLKLAIDYDKHDTIGIDAVAMCVNDILTTGAEPLYF
                     LDYIATHKVVPEIIEQIVKGISDGCVETNTALIGGETAEMGEMYHEGEYDVAGFAVGA
                     VEKEEYIDGSKVEKGDVIIGLASNGIHSNGYSLVRRLVAESGIDVNDTFEGEQSFLDM
                     LLTPTALYVSPVLAVKKDVQIKAMTHITGGGFYENIPRALPEGKTAVVNTASFPTPAI
                     FNWLQAQGNIDTDEMYHIFNMGIGFTLIVAPEDEVAVHEILKNANVDAYTIGHIAEED
                     SAIRLTEAK"
     gene            complement(8679..10100)
                     /locus_tag="PTC28_000743"
     CDS             complement(8679..10100)
                     /locus_tag="PTC28_000743"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDK5716057.1"
                     /translation="MYDIRGLNEECGVFGIWNHPHAAYLTYMALHSLQHRGQEGAGIV
                     CSNGEQLFGARGMGLLTEAISQQQLESLQGYPNAIGHVRYATTGASEISNVQPFLFKH
                     SKGDLGLAHNGNLTNAHQIRLAIESTGGIFQTTSDSEVLAHLLIKGKSENIKTNQKAA
                     LNQVKGAFSCVILNEEQLTATRDNRGVRPLMLGQVDGAYCVASETCAFTAIGAEYIRD
                     IEPGELITFSGENEVDYDMYTQDIGHKMCSMEYVYFARPDSEFHRHSIYNVRKALGRK
                     LAEEMGIDADIVIGVPDSSLQAAKGFSEQTGIPNEQGLLKNRYIGRTFITPDQSVRER
                     QVRMKHSPIRDVIEGKRVVVIDDSIVRGTTSKYIVKALKSAGAKEVHMGISSPPLKDP
                     CYYGIDVSTHAELMAAQHTVEEIREMIGADTLTYLSVEGMHEVFKAHDSKGECNACFT
                     GEYPIEIVDHELPEVKEMKRRGV"
     gene            complement(10079..12268)
                     /gene="purL"
                     /locus_tag="PTC28_000744"
     CDS             complement(10079..12268)
                     /gene="purL"
                     /locus_tag="PTC28_000744"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HDK5716058.1"
                     /translation="MPKFLEPTAEEVKVEKLYRDMGLSDAEFEKVTEILGRTPNFTET
                     GIFSVMWSEHCSYKHSKPFLKQFPTTGEHVLMGPGEGAGVVDIGDNQAVVFKVESHNH
                     PSAIEPYQGAATGVGGIIRDIVSIGARPINLLNSLRFGELTEKTNRRLLRGVVAGIGG
                     YGNCIGIPTTAGEIEFDERYDGNPLVNAMCVGVIDHDMIQKGTAKGVGNSVIYVGLKT
                     GRDGIHGATFASEELTEESESKRPSVQIGDPFVGKKLMEATLEAITYDELVGIQDMGA
                     AGLTSSSSEMAAKGGSGIHLELEKVPVREKGISPYEMMLSETQERMLLVVKKGTEQKF
                     LDLFDYHELDSAVIGEVTDTNRFVLTYEGEVFADIPVEPLADEAPVYILEGEPLQHDT
                     APNRYDDIDVNDVFDRLLTHPTIASKHYLYDQYDQQVGANTIIKPGLQASVVRVEGTN
                     KAIASTIDGEARYVFNDPYEGGKMVVAEAYRNLIAVGAKPLAMTDCLNYGSPEKKHIY
                     QQLTDSTRGMAEACEALATPVVSGNVSLYNETRTSSIFPTPVVGMVGLIENIDFLKSY
                     QPSIGDTLYVIGETTDSYGGSQIEKLLYSDVNHEVEKVDLSQEAAKGEAIRGAIREGV
                     ISHTQTVGKGGIAITLAKISAHYSLGIDAEVNLTNAQLFSETQGRYIVAVKAGQTLNI
                     EGATRIGTLTDTDDFKVVAQDSVIERRTSELKREWEGAIESCMTSVD"
     gene            complement(12261..12932)
                     /gene="purQ"
                     /locus_tag="PTC28_000745"
     CDS             complement(12261..12932)
                     /gene="purQ"
                     /locus_tag="PTC28_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HDK5716059.1"
                     /translation="MKFAVLRFPGSNCDRDMYNAALKSGVDADYVDYRETSLKGYDGV
                     LIPGGFSFGDYLRSGAVASVAPIIAEVKRLADEGKPVLGVCNGFQILTEIGLLPGALL
                     HNDSHLFVSRNEHLKIVNNQTPFTKGYSEGEEVVYPVAHGEGHYYCTEEIYQELIDNN
                     QIILKYMDNPNGSHDDIAGIVNKAGNVCGMMPHPERALEAILGTESGVKLFESMVNSW
                     REQNA"
     gene            complement(12934..13194)
                     /gene="purS"
                     /locus_tag="PTC28_000746"
     CDS             complement(12934..13194)
                     /gene="purS"
                     /locus_tag="PTC28_000746"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HDK5716060.1"
                     /translation="MKTIELHITLQPQVLDTQGQALTRAVHDLGYEQVNDIRVGKVLY
                     MTVDEATDEAVHNVVTTLSEKLFANTVIEEYSYKVLDEKENQ"
     gene            complement(13197..13898)
                     /locus_tag="PTC28_000747"
     CDS             complement(13197..13898)
                     /locus_tag="PTC28_000747"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011303439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HDK5716061.1"
                     /translation="MSLLYEGKAKRVFSTEQPDVLRIEYKDEVTAGNGAKKDAMVGKG
                     RLNNQITSRIFEYIKNEGIESHFVEQLSETAQLVKAVNIVPLEVVVRNIAAGSITKRL
                     GFEKGHVFDYPFVEFFYKNDDLNDPLITDDHVKLLGVADDAMIAQLKEQALRINQALI
                     KLMDEMGLALVDFKIEFGVDHEGQLLLADEISPDTCRIWDKATQENFDKDVYREDTGS
                     LIDTYQTFLNKLEAL"
     gene            complement(13895..15067)
                     /gene="purK"
                     /locus_tag="PTC28_000748"
     CDS             complement(13895..15067)
                     /gene="purK"
                     /locus_tag="PTC28_000748"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HDK5716062.1"
                     /translation="MNNRLLRKWRRCKMTFNKLQIGQTVGIIGGGQLGKMMAQSAQKM
                     GFKVVVLDPDETCPCRYVAHEFIHAAYDDMPALERLGERSDVITYEFENIAAEQLQTL
                     VSKYNVPQSYQAIQLLQDRLTEKQTLAQAGTKVVPFVQVTSVADLDEAVQTLGFPFML
                     KTRFGGYDGKGQIRLTSEAQLDEARELIANQECVAEQFLDLAKEVSLTVTIGNEGQMV
                     YFPLQENEHRNQVLFKTVVPARANHEQEARREVDKITQAVHFVGTFTVEFFIDQQNEL
                     YVNEIAPRPHNSGHYSIEACDYSQFDTHILAVTGHRLPEHIELLKPAIMMNLLGKDLD
                     LLEKELFAHPDWHVHLYGKVSRKPERKMGHLTILTDDVSKTEQQLIAKFEGRDEYK"
     gene            complement(15015..15497)
                     /gene="purE"
                     /locus_tag="PTC28_000749"
     CDS             complement(15015..15497)
                     /gene="purE"
                     /locus_tag="PTC28_000749"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002465404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HDK5716063.1"
                     /translation="MKVAVIMGSSSDWNVMKEACAMLEEFNIPYDQKVVSAHRTPHMM
                     VDFATNARSNGYHVVIAGAGGAAHLPGMVASMTTLPVIGVPIESKSLKGLDSLLSIVQ
                     MPGGIPVATTAIGQAGAKNAGILAARMIGMTDQEVQRKLEVYEQSLVEKVEAMQDDLQ
                     "
     gene            15707..16564
                     /gene="folD"
                     /locus_tag="PTC28_000750"
     CDS             15707..16564
                     /gene="folD"
                     /locus_tag="PTC28_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HDK5716064.1"
                     /translation="MSAKILDGKQIAKDYRQGLQDEVERLKEQGYTPKLSVILVGNDG
                     ASQSYVRSKKKAAEKIGMISEVIHLEESTSEADVLKELDRLNQDDSVSGILVQVPLPD
                     HVDEQKVLDAIDPDKDVDGFHPINIGRLYLDNAQLIPCTPLGVMELLKHADIELEGKN
                     AVVIGRSHIVGQPVAKLLLQQNATVTILHSRSQNISEHLKQADVIVSAVGRPGMVTKD
                     DVKPGAVVIDVGNTPDENGKLKGDVEYDEVKEVAGAITPVPGGVGPMTITMVLNNTLI
                     AEKMRRGIE"
     gene            complement(16876..18021)
                     /locus_tag="PTC28_000751"
     CDS             complement(16876..18021)
                     /locus_tag="PTC28_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide dioxygenase"
                     /protein_id="HDK5716065.1"
                     /translation="MLTQEEKGIILETVPVLKEKGTAITSNFYHRMFNQHPELRNMFN
                     QTNQKKGFQSTALAQSVLAAAMNIEDLTPILPVVKEIGYKHCALQVLPEHYPIVGENL
                     LAAIQEVVGIDENHPIIQTWAKAYGVIADAFIMVEKEIYEGMAWDGFKPFKVSKIETV
                     TPDIKAFTVTSETQDLSQFTPGQYITVDIESEKLPYKAKRHYSIVDGGKDFLTFGVKR
                     DVNEGHEGEVSTALHDEVHEGDTLYLSAPVGGFKIHHPERPQLFLGSGVGITPLISMY
                     RQVAGDAVSAQMIHVAATETAAAFVPELEHITASGKNNHLHIHLRDREGYLEADELKT
                     YLSDNTEVYVCGGTAFLQSMLKSLQALGVEQERVHFETFVPRLSVPV"
     gene            18249..18584
                     /locus_tag="PTC28_000752"
     CDS             18249..18584
                     /locus_tag="PTC28_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5011 domain-containing protein"
                     /protein_id="HDK5716066.1"
                     /translation="MNKILQSLSALGVSATLVSPNLNAEATTNTVPSIKGVDDLVIKV
                     GEDYNPCDGVKAYDKEDGDLTDKIKVNGHIDTTKQGIYTLQYEVTDSDGAIETSSRTI
                     KVVDAPLNE"
     gene            19085..20185
                     /gene="qoxA"
                     /locus_tag="PTC28_000753"
     CDS             19085..20185
                     /gene="qoxA"
                     /locus_tag="PTC28_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit II"
                     /protein_id="HDK5716067.1"
                     /translation="MSKLKSLLLAFGTLFLLAGCSDVEVLNAKGPMASDQRFLIIYSI
                     IFMVAIVVVVLILFAIFTYKYRYNNTRESGKVHHNALLETVWFLIPVIILIALMIPTV
                     KALYQYEEPPKSEDDPIVIYAVSGGYKWFFAYPDEKIETVNHLKIPTDRPVTFKLQAM
                     DTMTSFWVPQLGGQKYAMTAMTMEWTYEAHEEGTYRGRNSNFNGEGFSRHTFNVEAVS
                     QKEYDAWVKEAQSKKQLDQDTFDKQLLPITENKELTFSGTHMAFVDPAADPEYIFYAY
                     KRFNYAPKDHNFYDDKKGVLSEPNKPARKSQITNANYERHGMKAAILKNDQPFDNEFK
                     KEQKHTMDEMESMHEGAKDAEAHKDHKSGGGH"
     gene            20188..22176
                     /gene="qoxB"
                     /locus_tag="PTC28_000754"
     CDS             20188..22176
                     /gene="qoxB"
                     /locus_tag="PTC28_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001010769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit I"
                     /protein_id="HDK5716068.1"
                     /translation="MDFPWNELIVKGNWMITLAQISAPFLVIGVIAAITYFKLWGYLY
                     KEWFMSVDHKKIGLMYLICAVLMFVRGGIDAILLRIQLTVPDNPFLESNHYNEIFSTH
                     GVIMIIFMAMPLVIGLMNIIIPLQIGARDVAFPVLNNISFWLFVAGMLLFNLSFIVGG
                     SPAAGWTNYAPLAGEFSPGPGVNYYLIAIQISGIGTLATGVNFFVTIIRLKSPSMTFM
                     QMPMFVVTTFITMLIIILAFPVLTVALALMTADRVFDTAFFTVANGGMPMLWANFFWV
                     WGHPEVYILVLPAFGIYSEIIPTFARKRLFGHQSMVWATAGIAFLSFLVWVHHFYTMG
                     NGALVNSFFSITTMLIAVPTGVKIFNWLFTLHKGRISFESPMLFSLAFIPNFTIGGVT
                     GVMLAMASADFQYHNTYFLVAHFHYTIVAGVVFACFAAMIFWYPKAMGYKLFEKPNKW
                     FFWIFMVGFNVTFLPQFILGLDGMPRRLYTYMPEDGWFVLNVISSIGAAMMSIAFLIF
                     VGNIVYSHLKAPREATGDNWNGLGRGLEWSTASAIPPKYNFAITPDWDDIDTFVEMKK
                     QGRHYLDNHNYSDIHMPNDTHIGFWMGIFFFIGGFFLVFETLLPAILALAGIFGLMIW
                     RSFQQDHGYHIPASEVAETEARLRKARQKEREAMNHES"
     gene            22166..22774
                     /gene="qoxC"
                     /locus_tag="PTC28_000755"
     CDS             22166..22774
                     /gene="qoxC"
                     /locus_tag="PTC28_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit III"
                     /protein_id="HDK5716069.1"
                     /translation="MSHKNVNTIDARTHEGDLNKLGFWIFLTAEFALFGTLFATLLTL
                     QHGGSYGGMLTTDLFELPLVLIMTFLLLASSYTCGIAIYYMRKENKQLLLIWMIITII
                     LGIGFVGFEIFEFSHYVHEGATPQLASYWSSFFILLGTHGAHVTVGIFWIICLLIQVA
                     TRGLTKYNAPKLFIVSLYWHFLDVVWIFIFTAVYMIGMVYSG"
     gene            22771..23061
                     /gene="qoxD"
                     /locus_tag="PTC28_000756"
     CDS             22771..23061
                     /gene="qoxD"
                     /locus_tag="PTC28_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002474577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit IV"
                     /protein_id="HDK5716070.1"
                     /translation="MNTIVKHTIGFIASIILTLLAVFVTLYTSLSFQAKVTIIFGFAF
                     IQAFLQLLMFMHLTEGKDGRVQLAKVIFAIIITLITVIGTYWVMQGGHGSHI"
     gene            23241..24146
                     /gene="rihC"
                     /locus_tag="PTC28_000757"
     CDS             23241..24146
                     /gene="rihC"
                     /locus_tag="PTC28_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside hydrolase RihC"
                     /protein_id="HDK5716071.1"
                     /translation="MPIPIIIDTDPGIDDAAAISLALHHPQLDVQLISTVHGNVPLQH
                     TTRNAQQLIEHFHAHVPVASGAASPLVQKAVHAPHVHGESGMAGYTFDEPTTSLMSKN
                     SVEAMKDLLLQSTTPITLVPIGPLTNIALLLKMYPEVHTYIHQIVLMGGSVGNGNVSV
                     AAEFNVYADPEAAHIVFNSNLPIVMAGLDIARASNLPHALLPNIKEMNHTGHMLYHLF
                     QHYRGESFLDGLNVYDAYTIMYLCYPELFTVRPAKVDVELSGSHARGATFVDFNVTDS
                     STHVLMDIQAEAFQTAFLEMLQYCP"
     gene            complement(24818..26863)
                     /locus_tag="PTC28_000758"
     CDS             complement(24818..26863)
                     /locus_tag="PTC28_000758"
                     /inference="COORDINATES: protein motif:HMM:NF024642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDK5716072.1"
                     /translation="MLMSFEEEQAYLNETQHFIKNALKTLSKSQNVIKSKIIERRKEM
                     NAHETWILNMDNGNGSDNAQDLNALRMDECTYNQYHEKLKLYQNLLDRPYFGKVVLED
                     ETLYIGTQTLMDHNYRVLVCDWRTPIASLFYENELGRLSYENEKGQLFFEEVKGRRQF
                     KIIKGQLVDYVDSEMFIGDTGLMDYQMSTSRHKLGNIVSTIQKDQNEIIRLPINEDVV
                     VLGPPGSGKTAIAMQRIAYLLFKYKKKITHENLMLIAPNRIFHDYVSDVLPELGERHI
                     EVKSLMNIVREIAYFKSIHVEKKRIMIARIYRDKASEQQFYRKSSVEFFQWISKQLIN
                     ATCRFYFKNVMDQTGRIVISKEEIAMIFNGYRVNHDLTTAIQKLKQNLVALYQADYKR
                     LFVQNYTELENQNSYIGEKSEIVAQSKAKTARTLKRVKRMIQSYRFINIEKLYQRLCK
                     DFQVNVQLKKEAMAYEDFWILVWLYTKIVRGSHSLFKHIIVDEVQDYSVFQLDILRQC
                     YDEANFTFLGDLNQNFLPKSFIEFEDWDMTIKQLTTSYRSTKAISRYLDELKHTDTKV
                     VSVEGDPVIKISSAKVQHVKDIIMEVAHDVAIVVPSRIEGEQLYSALRHDIKLRLIEE
                     DDSFVTAGHIIIPYDLVKGFEYHTVISWRNNEYDSTNIQYIIASRAISQLYLLEVNG"
BASE COUNT         7822 a         5593 c         4868 g         8769 t
ORIGIN      
        1 cgcacgtgat gtccaatcct catttctgta tacatttaat aaggcgatga tgtttaggtt
       61 gtgcacataa aggttatatt gatgatacaa acaatttgaa aggtaggcgt tggaaatggc
      121 tgaaaaagat attaaaaaag ctgcagaaca agcgaaagat aaagagaaag aattgaaaga
      181 taagactgaa gatgcgaaag atggtgcaga gaaaacgaaa gatgatattc aaaaaacatt
      241 tgagtaaact ttaattgatg tttaatgtgt gaggagcagg atgattatgg cctgttcctt
      301 tttttcgttt taaattattt ctttttcatt tgtttaattt catcgtttct tacagattga
      361 caaactagct cttgctttcc caaggccttg actcaactaa gtttggcttg atttaagtgt
      421 aaacttgaga gaaaccaaat tggattttgg gagcattaca gaaatctcat gtgtaacaaa
      481 gatttcgttt tcctgccccc acaagactga gtggccttct caaaaatgca aacattgaga
      541 cttaggcagc tacgtcgcta aacagtaacc actattagag taaagaagta actatgagtc
      601 atatacacgc atccctcggg agtctcgagc cgtcccgtca accttcaacg agtctcatta
      661 actatgatag tgaaatgctt ttaatgaaaa aattaaattc acctctcctc aaatcgtttg
      721 cctcgtcatc aaaaacaaat tctaactttg aatatgcata tcatctttat tactttaggc
      781 tgcagatgtt ggcaattgtt taagcagctc aactctgaca tagacagtga aagattttga
      841 aaactacgtc tagggttttt cttcaaatac tgtcatttat tgatgcacac tgatgttgca
      901 tttatcaaaa ttcattgggg tcactgtcgt atcctacttt atgcatatga acgcacagtg
      961 aggtctttcg tgttcatttt ttcaatatat acatttttaa tggtttatgg tttttcaaat
     1021 tttgaatcat cagccgtttg aaaccttgac ttttcaatat tctaggtgta cattgacatt
     1081 atcaattaaa taagcacact aggggtgtga aagctgagat gaggtgtcac ctcaaaccct
     1141 ttgaacctga actagatgat actagcgtag gaaagtgttt tgttatgata tgtatattgt
     1201 gcggtggact tttgtctgtc acaccaataa cgtatccata tatcaatgag cacatgatgc
     1261 gcctatcttc agtttaagat atgcgtattt tttatttttg ggaggaattt acatatgaaa
     1321 aaaggcttaa cgttgtcaga catcctcgtc actgtactcg tatccgtgat ctttgcagtg
     1381 atttataatt tatggtgggc tgtcacaaat actttacagc cattaggttt acatcttgat
     1441 caattaatgt atggtatgtg gtttagtgct gcagtcgttg catatctcat tattcctaaa
     1501 atggggattg cattattagc tgaatttgct gcaggtgctg gcgaaacaat tatgatggga
     1561 cgttttgata tcccaacaat tatttacgct ttacttcaag gtttggcatg tgagattatt
     1621 tttgcgattt tccgctacaa atcacgtgct tttatggtcg ctatccttgc aggtatggca
     1681 gccgcaatca ttagtttacc tatcgactgg tactatggtt acttaaatga agttgcgact
     1741 tggaacttaa ttctactgat tgcttttcgt attatcagtg gtgctatatt agccggtgtg
     1801 ttcccatact tactcgttaa ggcattggat cagactggcg taacgaaact gtttcgtcct
     1861 gcttcaaaag acgattacga tgcattataa gggtgactta ttgtgttaaa agttaaaaat
     1921 ttacgtttaa aatacccgag cgcagattat aaaatttttg acgggattga cgtagaaatc
     1981 aaagataaag aaaaagtact tttacttggg ccatctggtt cgggtaaaag tacgttactc
     2041 aatgtattaa gtggcattgt gccgaactta attgatttac caatgaaata tgatgcatta
     2101 gaaattgctg aaaattcagg tgtcattttc caagacccgg attcgcagtt ttgtatgcca
     2161 caagtgaacg aagagttagc ctttatttta gaaaaccaac aaattccacg tcacgacatg
     2221 gacagccgta tccatgaagc attaaatcat gtcggtcttg atgtaaatcc aaagcaacgt
     2281 attcatcaat tgagcggcgg tatgaaacaa aaattagcga ttgcgggaac gttacttcaa
     2341 ggggcagata cattgtttct tgacgaaccg actgcgatgt tagatgtaga agcgaccgaa
     2401 aatttatgga atcttttaaa ggatttgtgg gaggacaaga ccgtactcat tgtcgaacac
     2461 aaggtagaac atatttggca acatgtcgat cgtgtcatac tgatgaatca tcacggccat
     2521 attatccaac aaggcacgcc tgaatatatt atggcgcatt acgaatcttt attaagtgaa
     2581 tatggtgtgt ggcatccaaa agcgtggtca catgcaccta tgcctcaaca tcccgttcaa
     2641 tctactgctc aaaattttta tttttcattc gaagaaggcg cgatacaaag gggccgtcgt
     2701 acattatatg aagtagacgc attacatatt ggaccgggag aatggataac actcactggg
     2761 aaaaatggat caggtaagac atcgctatta gagtcgatga tgcaattgat acgttataag
     2821 ggaaacatgc attatgatgg gcagaaatta actaaaatta aagatgccgc gcaacatatg
     2881 tttttagtgt atcaaaatcc tgaactgcaa tttatacaaa atagtgtgtt tgatgaaata
     2941 tgggtcaact atcaccatat ggactctgaa cacgcgaaaa caaaaactga agaaatgtta
     3001 gcactacttg atttggagca tgtgtcgagt caacacccat ttgaattatc tatggggcaa
     3061 aaacgtcgac tgagtgtcgc taccgcatta agtaccaatg cagatattat tttgttagat
     3121 gaaccgacat tcggcttaga cagtcataat acgtttaaat taattgaatt gttccaaagt
     3181 cgtattgcgc aaggtcagac gattttaatg gtcacgcacg acccacatat tatcgaacgt
     3241 taccctactc gtcggataga agtcaaagaa ggcaaactct atgaagtcga ggaggtacgc
     3301 acatgattga atcttggaaa acacgtcaca cgttcatgga tgatgtgaat atcgtcacca
     3361 aattgttttt aggcgtcgca cttttcttct tcattatttt cgttcatcat tttgacgtca
     3421 tgatttatct tgcgacattg atgctcattt ttatgttact cactgcaggg acaaaatgga
     3481 aagtcgtctt gtcgttcaca atactcgcaa cctttttcgc cctcacctct tcgttattta
     3541 tgatctttta cggcgatggg caacatgaat tattgaaatt cggcttcgtc aacatcacga
     3601 cggaaagtct tgtgcgtgga ttgcatcttt cattccggac gatgactgtg agttattttg
     3661 gattatctat tgcctttaca tcacaagtca ttatgatttt ttacagcttg atgcaacatt
     3721 taaaagtgaa accgaaaatt gcctatgctt ttatggcggc atttcgtatg attcccatca
     3781 tgttagagtc actttttcaa ctacgcaacg ccttaaaaat gcgttatcaa atgattgata
     3841 accgcaacta ttcaggcttc aaacgtctga aacatttatt aattccattg ctcagtcaaa
     3901 acatcagaaa agcccatcgc ctatctgtag cgatggagaa aaaaggattt aaagatggac
     3961 cacggacgta ttattatcat gtcccgttta gttataaaga cttgattctg attgggctca
     4021 ctgtggtcat cgttatactc gcatttacat tcgcacaaat gttaccgata actggtatta
     4081 ctgatgcacg ttaaccgaac tcagattttg cgttttcatg atctcgacga tgtgaaaagg
     4141 caggtctaga tttcctttta actttcccgt atgaccatct gcaaaggaaa tcgtttccct
     4201 ttattgattt ttgatagtca ataaagggat ttttattttt tattcaaccc aaaaaagcgt
     4261 aaaatccata gtcattttac ctaaaagatt ttacgcattt ttaatgttca ttcaatattc
     4321 attcgcttta atcgctttat gggcaatgtc ttgacgatag aataaaccgt cactttcaat
     4381 tttttcgaca cgtgcataag ctgcttgttg tgccgcttcg attgtcgcgc cttcaccaat
     4441 cgccagaatc acacgtccac ctgatgtgac atagtgttct ccatcatgtg ttaaaccact
     4501 gacaaagtat gcgcctggtt catcttcaaa acctttgaca gttgcacctt tttcatatgc
     4561 acctggatac ccttttgaag cgagcataac gcctacaacc gcatcatctt tccacttcat
     4621 attgattggt gctttttcat ctaattcaat gatgtgcgtc atgagatcac tttctaaacg
     4681 tgtcaataat acttgtgctt cagggtcacc gaaacgtgca ttaaattcaa tgactttcgg
     4741 cccttctttc gttaaaatcg caccgatgta taataaaccg aagaaatcat gcccttctgc
     4801 ttgcatcgct ttggcaatcg gttgcgcaat cttgtcattc gcttcatcta agacactttg
     4861 actcatatgt ggtacaggac agtacgcacc cataccgcct gtgttcggtc ctttatcttg
     4921 atcgtacgca cgcttatgat cttgcgcaat tgtatcgaat ggaacagcgt aatcaccatt
     4981 gacaaatgtc atgagtgaaa attcttcccc ttctaaaaat tgttcgaata cgactttact
     5041 attcgcttct ggatataatg tttctaccgc ttcacgtgct tgttcgcgtg tttcagcaat
     5101 gatgacccct ttacctgctg cgagtccatc ttttttcaac acaatcggta attcacacgt
     5161 ttcaatgtat gccactgctt catctttttg gtcgatttct cggtatgcag cagttggaat
     5221 atcatatttg gccatgagac gtttcgcaaa tgactttgat ccttcgattt gagccgcatc
     5281 ttggtttgga ccaaatactt taatgtctac cgctcttaat gcatcagcta agccatctgt
     5341 caacggctgt tcaggtccaa tcacgaccca tgtcacatca tgtgcttgtg caaatgcgac
     5401 gattgcttca tgatctgatt ctgcaatctc accgtgtact tcagccacat gggtcattgc
     5461 agcattgcct ggaatggcat aaacttgtga aactaatggc gattgattta atttgtgtgc
     5521 gagtatatgt tcacgtcccc cgccaccaac aactaatacg tgcatattcg atatcctcct
     5581 tattaatgtt taaagtgacg catgcctgtt gtcaccatag caataccata gcgattcgcc
     5641 atatcaatag actcttgatc tttaatcgag ccacctggtt gaataattgc tttaatacct
     5701 gcttttgctg ctgtttcgac agtgtctccc attgggaaaa aaccatctga tgctaagacg
     5761 acattgtcat tcatttcaat cgcacgatca atcgcaattt tagctgagcc tacacgattc
     5821 atttggcctg caccgatacc gactgtctgc ttgtcatttg caaggacaat cgcattactt
     5881 ttcactgatt tcacaacttt ccatcctaat aataatgcgt cccattgttc cttcgtcggt
     5941 ttcacatctg tcacaactgt catgtcagct tgtgctacat caaaacggtc tttatcttga
     6001 actaaataac cgcctgaaac cgatacaaat tctgttgcat ctgattcttc agtcatttca
     6061 atttcaagta aacgaatatt tttcttctgt tgtaaaatat ttaaagcagc ttgttcgaat
     6121 tttggcgcaa taacgacttc taagaaaatc gcatgtaagt cttctgcgag ttcagctgtg
     6181 actggacggt ttaatgcgac gataccaccg aaaatagatt gactgtccgc ttcatacgca
     6241 tgtgtgtacg ctgcatgaat gttttcgcct gtaccgacac cacaaggatt catatgtttt
     6301 accgcgaccg ctgcaggttg ttcgaattgt ttcactaaac ttagtgccgc atccgcatct
     6361 ttaatattgt tgtagctcag ttgtttaccg tgtaactgtg tcgcgcccgc aatcgtattt
     6421 ttcgctgtag atgtacgaat aaactgtgca gattgttgtg ggttttcacc gtaacgtaat
     6481 tgttcaagtt gatgcccaaa aaattgtgta atcgcttgat catattcaaa tgtatgttgg
     6541 aatactttaa tcattaatga cttgcggaat gcttcatcta aagaactgtt ttgaatgcgt
     6601 tgaatgactt catcatagtc tgttgggtca acaattgttg tgacatgttt gaagtttttc
     6661 gcagctgcac gtaacatcgt tggaccaccg atatcgatgt tttcaatcgc gtccatttca
     6721 gtgacgtctg gatttttcac cgtttcttta aatggatata aattcacaac gaccatatcg
     6781 attaaatcaa tattttgtcc ttttaattgc tcaagatgtt ctggtttgtc acgatctgct
     6841 aaaataccgc catgcacagc tgggtgtaat gttttcacac gaccatccat aatttcttca
     6901 aattgtgtca gttcagaaac cgatgtcacc ttgacacccg cttcgtcaat tgcacggaaa
     6961 gtcccgcctg ttgaatacaa ctcataacct gcttcaacga gggattgtgc aaatggaaca
     7021 ataccagttt tgtctgaaac acttaaaatt gcttttttca taattgatga tatctcctta
     7081 tcgaataatc ttcttaatga ctgctgggta caattcatac tctaatgatt taatacgttc
     7141 ttctaatgat tgttgtgtat cgtcttcata aattggacat gtgcgctgtt caatcatctg
     7201 acctgtatcc atacctgcat cgacgtagtg tactgttgaa cctgtttcct tatccccact
     7261 gtttaacgct tgtccgactg catttttacc tttatatttc ggcaataatg aagggtgaat
     7321 gttcaaaatg cgtccttcat atgctgataa caatgtttca tcgattaaac gcatatagcc
     7381 tgctaataca atccactcta caccttcctg acgcaaccaa tttaatacag ccgcttcata
     7441 agctacttta tcatcgaacg tgcgtggttc gaatgcatgg acaggaatgc catgttgttg
     7501 agcaagctga acacacgctg cttcaggctt gtcagtgtac aatgctgtga cttcgatatg
     7561 cacgagttca cccgatttga cacgtttcat aatgttatcg aaatttgtgc cggaaccaga
     7621 tgcaaagatt gcaattttaa ccactatttt gcctccgtta agcgaatggc actgtcttct
     7681 tcagcaatat gaccgattgt gtatgcgtcc acattcgcat tttttaagat ttcatgaact
     7741 gctacttcat cttcaggtgc aacgatgagt gtaaaaccaa tccccatgtt gaagatatgg
     7801 tacatttcgt ctgtatcgat gttaccttgt gcttgtaacc aattgaaaat agccggtgtt
     7861 ggaaacgatg ctgtgttcac aacagccgtt ttgccttctg gtaaagctct cggaatattt
     7921 tcgtaaaaac caccacctgt tatatgtgtc atcgctttaa tttgaacatc ttttttcacc
     7981 gcaagcacag gtgacacgta taaagcagtt ggtgttaaga gcatgtctaa gaagctttgt
     8041 tcaccttcaa atgtatcgtt cacatcaata cctgattccg cgacaagacg acggactaaa
     8101 ctgtaaccgt ttgaatgaat gccgtttgag gcaaggccga tgatgacgtc acccttttct
     8161 acttttgagc cgtcaatgta ttcttctttt tcaactgcac cgacagcaaa gcccgcaaca
     8221 tcgtattcac cttcatgata catttcaccc atttcagctg tttcgccacc gattaaagct
     8281 gtgtttgttt caacacaacc atcactaatg ccttttacga tttgttcgat aatttccggt
     8341 accactttat gtgtcgcaat atagtctaaa aagtatagcg gctctgcgcc agtcgttaaa
     8401 atgtcattta cacacattgc aacggcgtca ataccgattg tgtcatgttt gtcatagtcg
     8461 atagcgagct ttaactttgt accgacacca tctgttcctg atacgagtac gggggctttc
     8521 atattgagtt gtgataaatc aaatgttgca ccaaatcctc ctaagccgcc aagtacttct
     8581 ttacgcatcg ttcgttcaac gtggcttgac attcgtttta ccgcttcata gccagcttcg
     8641 atatcgacac cagccttttt atatgattca gccattgatt acactcctct tcttttcatt
     8701 tccttaactt ctggtagttc atgatccaca atttcaatcg gatattcacc cgtaaaacaa
     8761 gcgttacatt cgcctttaga atcatgggct ttaaacactt catgcatgcc ttcaacagat
     8821 aaatatgtca atgtatctgc gccaatcatt tcgcgaattt cttctacagt atgttgagcc
     8881 gccatcaatt ctgcatgagt agacacgtca ataccgtagt aacacggatc ttttaatggg
     8941 ggtgaagaaa tgcccatatg cacttctttc gcacctgcag atttcaatgc tttaacgata
     9001 tatttacttg tcgttccgcg cacgatcgag tcatcaatca cgaccacacg tttgccttca
     9061 atcacatcac gaatcggtga atgcttcata cggacctgtc tttctctcac agactgatct
     9121 ggtgtaataa acgtacgacc gatataacgg tttttcagca acccttgttc gttcggaatc
     9181 cctgtttgtt cagaaaagcc tttcgccgct tgtaatgaag aatcgggaac accaatcacg
     9241 atatccgcat cgatgcccat ttcttcagct aatttacgtc caagtgcttt acggacattg
     9301 taaatcgagt gtctgtgaaa ttctgaatcc ggacgtgcaa agtagacata ttccatcgag
     9361 cacatcttat gaccgatatc ttgtgtatac atgtcgtagt ccacttcgtt ctcaccagaa
     9421 aatgtaatca attcacctgg ttcgatgtca cggatgtatt ctgcaccaat tgctgtaaag
     9481 gcacatgttt cactcgcaac acagtatgcg ccatcgactt gacctaacat caatgggcgg
     9541 acgccacgat tgtcacgtgt cgctgtcagt tgttcttcgt ttaaaatgac acaactaaat
     9601 gcccctttca cttgattcaa tgctgctttt tggtttgttt taatattttc cgattttcct
     9661 ttaatcaaca gatgagcaag tacttctgag tcactcgtcg tttggaaaat gccgcctgtt
     9721 gattcaatgg ctaaacgaat ttgatgtgca ttcgttaagt ttccattgtg tgccaaacct
     9781 aagtcccctt tagaatgttt gaacaaaaac ggttgcacgt tggaaatctc gctcgctcct
     9841 gtggtcgcat aacggacatg accaatggcg ttcggataac cttgtaatga ctccaattgt
     9901 tgttgtgaaa ttgcctcagt taacaatccc ataccacgcg caccaaaaag ttgttcaccg
     9961 ttcgagcaca caatccctgc accttcttga ccgcgatgtt gcaaactgtg caatgccatg
    10021 taagtcaaat aggctgcatg aggatggttc cagatgccga aaacaccgca ttcttcgttt
    10081 agtccacgga tgtcatacat gactcaatag ctccttccca ttcacgttta agttcagatg
    10141 tacgacgttc aatcacactg tcttgtgcaa cgactttaaa gtcatctgta tccgtcaatg
    10201 taccgatacg tgttgcgcct tcgatattta atgtttgacc tgctttcact gcaacgatat
    10261 aacgtccttg cgtttcacta aataattgtg catttgttaa attgacttca gcgtcaatac
    10321 ctaggctgta atgcgcgcta attttagcaa gtgtaatcgc aataccccct ttaccgacag
    10381 tttgtgtatg tgaaatcaca ccttcacgaa tcgcaccacg tattgcttca cctttcgctg
    10441 cttcttgtga taaatcgact ttttcaactt catggttcac atcgctatac aataattttt
    10501 cgatttgact cccaccatag ctatctgtcg tttcaccgat gacataaagt gtgtcaccta
    10561 tagacggttg atatgatttt aagaagtcga tgttttcaat taaacctacc atccctacaa
    10621 caggtgttgg gaaaatagaa gatgtacgtg tttcattata aagtgaaacg ttacctgata
    10681 cgacaggtgt tgcaagtgct tcacatgctt ctgccatccc acgtgttgag tctgtcaatt
    10741 gttgataaat gtgctttttc tcaggtgaac catagtttaa gcagtccgtc atcgctaatg
    10801 gttttgcacc gacagcaatt aagttacggt atgcttcggc tacgaccatt ttgccgcctt
    10861 catacggatc gttaaagaca taacgtgctt caccatcaat cgtagacgca attgctttgt
    10921 ttgtaccttc tacacggacc acagacgctt gtaaacctgg tttaataatt gtatttgcac
    10981 caacttgttg atcatattgg tcatataaat aatgttttga tgcaatcgtt ggatgtgtta
    11041 ataaacgatc aaaaacatca ttcacgtcaa tatcatcata acggttcggt gctgtatcgt
    11101 gttgtaacgg ttcaccttca aggatgtata ctggcgcttc atccgcgagt ggttcgacag
    11161 gaatatctgc aaatacttca ccttcataag tgaggacgaa gcggttcgta tccgtcactt
    11221 caccaatcac tgcactgtct agttcatgat agtcaaacaa atctaaaaac ttttgttcag
    11281 tccctttttt aacgacaagt aacatacgtt cttgtgtttc agataacatc atttcatatg
    11341 gagaaatacc tttttcacgt actgggactt tttcgagctc aagatgaatc ccgctgcccc
    11401 ctttagctgc catttcagat gatgaagaag ttaaaccagc cgcacccatg tcttgaatac
    11461 cgacaagttc gtcataagta atcgcttcta aagtggcttc cattaatttt ttaccaacaa
    11521 atgggtcacc gatttgaaca gatggtcgtt tgctttcact ttcttcagtt agctcttctg
    11581 atgcaaatgt cgcaccatga ataccgtcac gtcccgtttt caaaccaacg taaatgacag
    11641 agttaccgac acctttagct gtaccttttt gaatcatatc gtgatcaatg acaccgacac
    11701 acatcgcatt gacaagtgga ttgccgtcat agcgttcgtc aaattcgatt tcacctgcag
    11761 ttgtcggaat accgatacag ttaccgtaac caccaatacc tgcaacgaca ccacgtaata
    11821 aacgacggtt tgttttttca gtcaattcac caaaacgtaa gctgttcaat aagttaattg
    11881 gacgcgcacc gatagaaaca atgtcacgaa taatcccacc gacacctgtc gcagcacctt
    11941 gataaggttc aattgctgaa gggtggttat gtgattccac tttaaataca acagcctgat
    12001 tgtcaccaat atcaactacc cctgcacctt caccaggacc cattaaaaca tgttcacctg
    12061 ttgtcgggaa ttgttttaaa aatggtttag aatgtttata tgaacagtgt tcactccaca
    12121 taacagaaaa aatacctgtt tccgtaaaat taggtgtacg tcctaaaatt tcagttactt
    12181 tttcaaattc tgcatcgctt aaccccatgt cacgatataa tttttcaact ttgacttctt
    12241 ctgcagttgg ctctaaaaat ttaggcattt tgttccctcc agctattcac cattgattca
    12301 aataatttca caccactttc tgtaccaaga atggcctcta atgcacgttc tggatgtggc
    12361 atcatgccgc aaacattccc tgctttgttg acgattccag caatatcatc atgtgaaccg
    12421 ttcggattgt ccatatactt taagatgatt tgattattgt cgatgagttc ttgataaatc
    12481 tcttctgtac aataataatg accctcacca tgtgctactg ggtaaacaac ttcttcacct
    12541 tcactataac ctttcgtaaa tggtgtttga ttattcacaa ttttaaggtg ttcatttcga
    12601 ctcacgaata aatgtgaatc gttgtgtaat aacgcacctg gtaataaacc aatttccgtt
    12661 aaaatttgga atccgttaca tacgccaaga acgggctttc cttcatcagc caatcttttc
    12721 acttctgcaa taatcggtgc tacacttgcc accgcacctg aacgtaagta gtcaccaaat
    12781 gagaaaccac caggaatcaa tacgccatcg taccctttta atgatgtttc acggtaatcg
    12841 acataatccg catcgacacc tgatttcaat gctgcattat acatatcacg gtcgcagtta
    12901 gaacctggga atctaaggac agcgaacttc atattattga ttctcctttt catccaaaac
    12961 tttgtaacta tattcttcaa tcactgtatt cgcaaataac ttttcactta aagttgtcac
    13021 aacattgtgt accgcttcat cagttgcttc atctactgtc atgtataaaa ctttaccaac
    13081 gcggatatca ttgacttgtt cataacctaa gtcatgtaca gcgcgagtca acgcttgacc
    13141 ttgtgtatct aaaacttgtg gttgtaaagt gatgtgtaat tcgattgttt tcatgattaa
    13201 agtgcctcca atttatttaa gaaagtttgg taagtatcaa ttaaagatcc tgtatcttct
    13261 ctataaacat ctttgtcaaa gttttcttgt gttgctttat cccaaatacg acatgtatcc
    13321 ggggaaattt catcagcgag caacaattga ccttcatgat caacgccgaa ttcaatttta
    13381 aaatcaacta atgctaagcc catttcatcc attaatttga tcaatgcttg gttaatgcgt
    13441 aatgcctgtt ctttcaactg tgcaatcatt gcatcatccg caacccccaa cagcttgaca
    13501 tgatcatcag taataagcgg gtcattaagg tcgtcatttt tatagaaaaa ctctacaaac
    13561 ggataatcaa acacatgtcc tttttcaaat ccgagacgtt tcgtaattga acccgctgca
    13621 atgttacgta caacaacttc taaaggaacg atgttgactg ctttaacaag ttgtgctgtt
    13681 tctgaaagtt gctcaacaaa atgactctcg ataccttcat ttttaatgta ttcaaagatg
    13741 cgcgatgtaa tttgattgtt taagcgccct ttacctacca ttgcatcttt tttcgcacca
    13801 ttaccagctg tgacttcatc tttatattca attctcaata catccggttg ttctgttgaa
    13861 aaaacacgtt ttgctttgcc ttcatataaa agactcattt gtattcgtct ctcccttcaa
    13921 attttgcgat cagttgttgt tcagtctttg aaacatcatc agttagtatt gttaaatgcc
    13981 ccatcttacg ttcaggttta cgtgaaactt tgccgtagag gtgaacatgc caatcaggat
    14041 gtgcaaacaa ttctttctcc aacaaatcca aatccttacc taacaaattc atcatgattg
    14101 caggttttaa caattcaatg tgttcaggta aacgatggcc tgtcacagct aagatgtggg
    14161 tatcaaattg cgaataatca caggcttcaa ttgaataatg tcctgaattg tgtggacgtg
    14221 gcgcaatttc attgacgtac aattcatttt gttgatcaat aaaaaattcc actgtaaacg
    14281 tccctacaaa atgtaccgct tgggtaattt tgtcgacttc acgacgtgct tcttgttcgt
    14341 gattcgcccg tgcaggtaca acagttttaa ataatacttg gtttcggtgt tcattttctt
    14401 gtaatgggaa atagaccatt tgcccttcat taccgattgt gacagttaaa gacacttctt
    14461 tcgctaagtc taaaaattgc tccgcgacac attcttggtt ggcaatcaat tcacgtgctt
    14521 catctaattg tgcttctgag gtgagacgga tttgaccttt gccatcataa ccaccaaaac
    14581 gtgttttcaa catgaacgga aaacctaatg tctgtaccgc ttcatctaaa tccgctacag
    14641 aagtcacttg aacaaatggc accactttcg ttcctgcttg agcaagtgtt tgtttttctg
    14701 tcaaacggtc ttgcaacagt tgaatggctt gataactttg tggcacatta tatttcgaaa
    14761 ctaatgtttg gagctgttcc gccgcgatat tttcaaactc ataagtaatg acatctgatc
    14821 gttcacctaa tcgctctaac gctggcatat catcgtaagc tgcgtgtata aattcatgag
    14881 caacgtaacg acaaggacac gtttcatcag gatcgagcac aactacttta aatcccattt
    14941 tttgtgcgga ttgtgccatc atttttccca attgaccgcc gccgataatg ccaactgttt
    15001 ggccaatttg caacttattg aaggtcatct tgcatcgcct ccactttctc aacaagcgat
    15061 tgttcatata cttcgagttt tcgttgtact tcttgatcgg tcataccaat cattcttgcc
    15121 gctaaaatgc ctgcgttttt cgcccctgct tgaccaatgg ctgtcgtcgc aacgggtatc
    15181 cctcctggca tttgtacaat tgaaagtaaa gaatctagcc cttttaaact ttttgactca
    15241 atcggtacac cgatgacagg gagtgttgtc atcgaagcca ccattcctgg taaatgcgcg
    15301 gctccccctg ctcctgcaat aacgacatga tatccattac tgcgcgcatt tgtggcaaaa
    15361 tcgaccatca tatgtggcgt acgatgtgca gatactactt tttgatcata cggaatgtta
    15421 aattcttcta acatggcaca tgcttctttc atgacattcc agtctgaaga actccccata
    15481 atgactgcta ctttcacaat gaacaccctt tcaaaagttt gaaatactat tcttaatagt
    15541 tgtatattac aggtatagca taacaagctt aaattgtttt ttcaacgcaa aaatcgaact
    15601 ttaatacttt tttaacatct atatttcgta tttcagttca tttttgttat aatcaaattg
    15661 caatcattcg ttaatgttcg aattattatg aggaggctaa tattttatga gtgcaaagat
    15721 tttagatggc aagcaaattg cgaaagatta tcgtcaaggt ttacaagatg aagtagaaag
    15781 attgaaagaa caaggctata caccaaaact ttcggttatt ttagttggga atgacggtgc
    15841 gagccaaagt tatgtccgtt ctaaaaagaa agcagctgaa aaaatcggca tgatttcaga
    15901 agtgattcat ttagaggaaa gtacttcaga agcagatgtt ttaaaagagt tagatcgttt
    15961 gaaccaagac gattcagtta gtggtatttt agttcaagtg ccactccctg atcatgtaga
    16021 tgagcaaaaa gtgcttgatg cgattgatcc agataaagat gtcgatggtt ttcaccctat
    16081 caatatcggt cgcttatact tagacaatgc acaattaatt ccttgtaccc cccttggcgt
    16141 gatggaatta ttaaagcacg ctgatattga acttgaagga aaaaatgcag tagtcatcgg
    16201 tcgcagtcat attgtaggcc aacctgttgc gaaattatta cttcaacaaa atgcaacagt
    16261 gacaatttta cactctcgca gtcaaaatat tagtgaacat ttaaaacaag ctgatgtgat
    16321 tgttagcgca gtaggtcgtc caggaatggt gacgaaagat gacgtgaaac caggtgctgt
    16381 tgtcattgat gtcggcaata caccagatga aaatggtaag cttaaaggcg atgtcgaata
    16441 cgatgaagtg aaagaagtag ctggtgcaat tacacctgta cctgggggtg taggtccaat
    16501 gacaatcaca atggtattga ataatacgtt aatcgctgaa aaaatgcgtc gcggtatcga
    16561 atagtgagat gaagggataa aacaacaaca atttttgatg cgattgatgc aatgtttttg
    16621 taccctaatt cattctcatt ttccgatgaa cagtcagggg ctgggacaca gaccttcata
    16681 ttcattaaga aaaaaccgtc aaaattcatt ttttagaatt tgacggcttt tttcttaatt
    16741 agcgaacgaa aactagcact tattttggcc agtttccgta tatttactgc catgagtgtt
    16801 atgccaagtt cgcactcaac atcgcttttt taacgaacta ggggggctat gtcctagcct
    16861 ctgacaatct cttttttata caggtacact taaacgcggt acaaacgttt cgaaatggac
    16921 gcgctcttgt tccacaccta atgcttgtaa tgatttaagc atcgattgta aaaatgctgt
    16981 gccaccacaa acgtaaactt ctgtattatc tgaaaggtac gtttttaatt cgtctgcttc
    17041 taaataccct tctctgtctc tcaaatgaat gtgtaaatga ttgtttttac ctgatgcagt
    17101 aatatgctca agctcaggta caaatgccgc tgctgtttca gttgccgcaa catgaatcat
    17161 ttgtgcagat acagcatcac ctgcaacttg acgatacatt gagatgagtg gcgtaattcc
    17221 tacacctgaa ccaaggaata attgcggacg ctcaggatga tggattttga aaccacccac
    17281 cggcgcagat aagtataatg tgtctccttc atgaacttca tcatgtaatg ccgttgatac
    17341 ttcaccttca tgtccttcat tcacgtcacg tttaacgcca aatgttaaga aatctttgcc
    17401 accatcaaca atggaatagt gtcgtttcgc tttgtacggt aatttttcac tttcgatatc
    17461 gactgtaatg tattgtcctg gtgtgaattg acttaaatct tgtgtttcag aagtgactgt
    17521 aaatgcttta atgtcaggtg ttactgtctc aatttttgat actttaaatg gtttaaaacc
    17581 gtcccaagcc atgccttcat agatttcttt ttcaaccata ataaatgcgt ctgcaattac
    17641 gccgtacgct tttgcccaag tttgaatgat tgggtgattt tcatcaatac ctacgacctc
    17701 ttgaatcgcc gctagtaaat tttctcctac aataggataa tgctctggta atacttgtaa
    17761 cgcacaatgt ttatagccaa tttctttcac tactggcaaa atcggtgtta gatcttcaat
    17821 gttcatcgca gcagccaata cagattgagc cagtgcagta gattggaatc ctttcttctg
    17881 gttcgtctga ttaaacatgt tacgtaattc agggtgttgg ttaaacatgc gatggtaaaa
    17941 attagaagtt attgctgttc ctttttcttt taataccggt actgtttcta aaataatccc
    18001 tttttcttct tgcgttaaca ttgatcatca ctcctgttta aagtttacat tttatagttt
    18061 atatgaattg atatagcgcg cgctattaat aaaccgtctt tacatcaacg ctttcaatca
    18121 ttcaataaac ttacaaattt ttaatcataa ttcggtccat agtaggatag cttattttgc
    18181 tcaaaaatgt ataatactaa ttaatcacac gacatcgaaa tcattgcgtt gaatggaggc
    18241 cttattttat gaacaaaata cttcaatctt tatcagcact gggtgtatca gcgacacttg
    18301 tttcacctaa tcttaatgca gaggcaacta cgaatactgt tccctctatc aaaggtgtag
    18361 acgatttagt catcaaagtc ggcgaggact acaatccttg tgatggtgtc aaagcatatg
    18421 ataaagaaga cggtgacttg actgataaaa ttaaggtcaa tggacatatt gatacaacga
    18481 aacaaggtat ttatacatta caatatgaag tcactgattc tgatggtgct atagaaacgt
    18541 catcacgtac cattaaagtt gtagacgccc cacttaacga gtagctaaca atacaattat
    18601 tataaatgca taacgtttta tcatattttg tcgccaactt gtccattgtt ttatcctaag
    18661 catcgaaact gaatcccatc atcatcccac atagtatata gagcagaact taccttttca
    18721 tcatcaggct ctatatacta tcgcacccta cacttttatt ttacactttt tttcacaaac
    18781 ttttattagt caattcccta aatttcaatt caaaatcccc tctgtctaag ccgtaagaat
    18841 tttctgttaa cagacgtgaa ttttattatt tccccctttt ttcttcatta ataagtaaac
    18901 attgtgacat ttcacaaaat gtacacataa ttttaataaa tgccaaaaac ggcgccattc
    18961 ctagagtgac aaggccttct acaatttgat ttaattgttt tttcaaaaag ccacttgtaa
    19021 atatcccata ttattttaaa attaatgtaa gccctacaat tgtagtatta ggaggtcaaa
    19081 aaaagtgtca aaattaaagt ctttgcttct tgcatttgga acattgtttt tgcttgcggg
    19141 ctgttctgat gtagaagttt taaacgcaaa agggccaatg gccagcgacc aaagattttt
    19201 gattatctat tcaattatct ttatggttgc cattgttgta gttgtactta ttcttttcgc
    19261 gatattcact tataaatacc gctataataa tacacgcgaa tctggtaaag tacaccacaa
    19321 cgcacttctc gaaacagtat ggttccttat ccctgtaatt atcttaattg cattgatgat
    19381 tccaactgta aaagccttat atcaatatga ggaaccacca aagtctgaag atgaccctat
    19441 cgtcatttat gcagtaagtg gtggatacaa atggttcttc gcttatccgg atgaaaaaat
    19501 tgagacggtt aaccatctta aaattccaac tgatcgtcca gtgacattca aacttcaagc
    19561 gatggataca atgacaagtt tctgggttcc acaactcggc ggtcaaaaat acgcaatgac
    19621 tgcgatgact atggagtgga cttatgaagc acatgaagaa ggtacatatc gtggccgtaa
    19681 ctcaaacttc aacggtgaag gtttctcacg tcacacattt aacgttgaag ctgtgagcca
    19741 aaaagagtat gatgcttggg ttaaagaagc acaatctaag aaacaactcg accaagatac
    19801 attcgataaa caacttcttc caatcactga aaataaggaa ttaactttca gtggtacaca
    19861 tatggcattt gttgatccag cagctgatcc agaatatatt ttctatgctt ataaacgatt
    19921 taattatgca ccaaaagatc acaacttcta tgatgataaa aaaggtgtct taagcgaacc
    19981 gaataagcca gcacgtaaat ctcaaattac gaatgccaac tatgaacgcc atggtatgaa
    20041 agctgcaatt cttaaaaatg atcaaccatt tgataacgaa ttcaaaaaag agcaaaaaca
    20101 tactatggat gaaatggaat caatgcatga aggtgccaaa gacgctgagg cacacaaaga
    20161 tcataaaagt ggaggtggac attaatgatg gactttccat ggaatgagct tattgtaaaa
    20221 ggtaactgga tgattacatt ggctcaaatc agtgcacctt tcttagttat cggtgtcatt
    20281 gcagccatta cttactttaa gctctgggga tatttatata aggaatggtt catgtcagtc
    20341 gaccacaaaa aaatcggttt gatgtactta atctgtgcgg tattaatgtt cgtacgtggt
    20401 ggtattgatg caattctatt acgtattcaa ttaacagtac ccgacaaccc attcttagag
    20461 tcaaatcact ataacgaaat tttctcaacg cacggtgtca tcatgattat tttcatggca
    20521 atgccacttg taatcggtct aatgaacatc attatcccat tacaaatcgg tgctcgtgac
    20581 gttgctttcc cagtattgaa caacattagc ttttggttgt tcgtagcggg tatgctttta
    20641 tttaaccttt cattcatcgt gggtggttct ccagctgcag gttggacaaa ctatgcgcca
    20701 cttgccggtg aattcagtcc tggacctggt gtcaactatt atttaattgc cattcagatt
    20761 tcaggtattg gtactttagc aacgggtgtg aacttcttcg taacaatcat ccgtctaaaa
    20821 tcaccaagta tgacatttat gcaaatgcca atgttcgttg tgacaacatt tatcacaatg
    20881 ttaatcatca tcttggcatt cccagtgtta actgtagcac ttgcattaat gactgctgac
    20941 agagtgtttg atactgcatt cttcacagta gctaatggcg gtatgccgat gttatgggca
    21001 aacttcttct gggtatgggg gcaccctgaa gtatacatcc ttgtccttcc agcattcggt
    21061 atttattcag aaattattcc aacatttgca cgtaaacgtt tatttggaca ccaaagtatg
    21121 gtgtgggcaa cagctggtat cgcattcttg agtttcttag tttgggttca ccatttctat
    21181 acaatgggta atggtgcatt agttaactca ttcttctcta tcacaacaat gttgatcgct
    21241 gtgccaacag gtgtaaaaat ctttaactgg ttatttacac tacacaaagg acgtatttca
    21301 tttgaatcgc caatgttatt ctcattagcg tttattccta actttacaat tggtggggtt
    21361 accggggtta tgcttgcgat ggcatccgca gacttccaat accacaacac atatttctta
    21421 gtggcacact tccactatac aattgttgcc ggtgttgtat ttgcatgttt cgcagctatg
    21481 attttctggt atccaaaagc tatgggttac aaattattcg aaaaaccaaa caaatggttc
    21541 ttctggatct tcatggttgg tttcaacgtg acattcttac cacaattcat tttaggtctt
    21601 gatggcatgc cacgtcgttt atacacttac atgccagaag atggttggtt cgtattaaac
    21661 gtgatttctt caatcggtgc tgcaatgatg tcgattgcgt tcttaatctt tgtaggtaac
    21721 attgtataca gtcacctcaa agcaccacgt gaagcaactg gtgataactg gaacggttta
    21781 ggtcgtggtt tagagtggtc tactgcatct gcaattccac ctaaatacaa ctttgcaatt
    21841 acacctgatt gggatgatat tgatacattt gttgaaatga aaaaacaagg tagacactat
    21901 cttgacaatc acaattacag cgacattcac atgccgaacg atacacacat cggtttctgg
    21961 atgggtatct ttttcttcat cggtggtttc ttcttagtat tcgaaacatt attacctgcg
    22021 attcttgcat tagctggtat cttcggttta atgatttgga gaagtttcca acaagatcat
    22081 ggttaccaca tccctgcaag tgaagtagct gaaactgaag cgcgcttgag aaaagctcgc
    22141 caaaaagaaa gggaggctat gaatcatgag tcataaaaat gtgaatacta ttgatgctcg
    22201 tacacatgaa ggcgatttaa ataaactcgg tttctggatc ttccttacag ctgaattcgc
    22261 actttttggt acacttttcg caacattgtt aacgctccaa catggtggta gctacggtgg
    22321 tatgttaaca actgatttgt ttgaattacc acttgtttta atcatgacat tcctactttt
    22381 agcaagttct tacacttgtg gtattgcaat atactacatg cgtaaagaga acaagcaatt
    22441 gttattaatt tggatgatta ttacaattat tttaggtatt ggattcgttg gctttgagat
    22501 tttcgaattt agtcactatg tgcatgaagg tgctacacca caacttgcat cttattggtc
    22561 aagtttcttc atccttttag gaacgcacgg tgcccacgtg acagttggta tcttctggat
    22621 tatttgttta ttaatccaag ttgccactcg cggacttaca aaatataatg caccaaaatt
    22681 attcattgta agtttatact ggcatttctt agacgttgtg tggatcttca tcttcactgc
    22741 agtgtatatg atagggatgg tgtatagcgg atgaatacaa ttgtaaaaca tacaataggc
    22801 tttatcgcct caatcatttt aactttactc gctgttttcg tgactctata tacatcattg
    22861 tcattccaag caaaagtaac aattattttc ggttttgcat tcatccaagc gtttttacag
    22921 ctcttaatgt tcatgcactt aactgaaggt aaagatggtc gtgttcaact tgcaaaagtt
    22981 atcttcgcga ttatcattac attgatcaca gttatcggaa catactgggt aatgcaaggc
    23041 ggacatggtt cacatattta atccatgacg caaaaagcac taacacatcg cgtgttagtg
    23101 cttttttata cttattttag tatgacactt ctattgaact ccccctttgt agtattgtca
    23161 tatctttttt cctaaaacag ttttaacaag ttgaagcgaa cgtacacaac cattactata
    23221 gataaaaagg aggttttact atgcccattc caatcattat tgatacagac cctggcattg
    23281 acgatgcagc tgccatcagt ttggcacttc atcatccaca acttgacgta caactgatat
    23341 caaccgtaca tggtaacgtg ccactccagc acacaacgag aaatgcccaa caattgattg
    23401 aacactttca tgcccatgta cctgttgcat caggtgcagc atcaccactc gttcaaaagg
    23461 ccgtccacgc ccctcatgtt catggtgaaa gcggtatggc gggttacacg tttgacgaac
    23521 cgactacctc tctcatgtca aagaatagtg tagaagcgat gaaagaccta cttctccaat
    23581 cgacgacacc gataacatta gtgccgattg gaccactcac aaacatcgca ttacttttaa
    23641 aaatgtatcc agaagttcat acatatatac atcaaatcgt gcttatgggt ggcagtgtcg
    23701 gtaatggcaa tgtaagtgtt gcggcagaat ttaacgtcta tgccgaccct gaagctgcac
    23761 atattgtctt caactcaaac ttacctatcg tgatggctgg tttggatatt gcgcgtgcat
    23821 ctaacctacc tcatgcatta ttgccaaata ttaaggaaat gaatcacacc ggtcacatgt
    23881 tgtatcatct cttccaacat tatcgtggtg aatcattttt agatgggtta aacgtttatg
    23941 acgcttatac aataatgtat ttatgctatc ctgagttatt tacagttcgc ccagctaaag
    24001 tagacgtgga gttaagtggt agccatgcac gtggcgcaac atttgttgac tttaatgtga
    24061 cagacagttc aacacacgtg ctcatggata ttcaagcaga agcttttcaa actgctttcc
    24121 ttgaaatgtt gcaatattgc ccttaaaatc gttaagcaaa aaggagttta cttttcaatg
    24181 tcctccgcta attctatatg tactgccttg ctacgtatgg acacacaccc atcaacagtt
    24241 ctaccttatc tcaaaaaaaa acagagcgag gtcattcaat ttaccttgct ctgtcttctt
    24301 atagttaaaa taaattaaaa agagatacta ctttttataa ggttacttga gtcgatgata
    24361 tgacgttgct ctctttcctt aactttgttc atgcaaaatt agcgaacgaa tgagactccc
    24421 taggtaaatg agaaaaataa taggataact ttttgatgtt tgcatgtagc caatgtttaa
    24481 cgcagaatca gaataaaaat agattgaaat gagattaaat tttgacgtta actgattcga
    24541 tagaagggga atgccctctt tccttgcgct tgttcatgca aaattgccgt atggacgaga
    24601 ctcccgaggg atcagctgaa ccggaaaatc caccaacgct tcaacaaatg taacagtata
    24661 atcaaagcgt tggttagttg taggttcagc ccctgggaaa cgcgagtcca agacggcaat
    24721 cgtatgtaag cgacatgttc ttaaaggaaa gagcgtaagt tcagcaaaat atgtgattga
    24781 agtttctaaa atatcaatcc actgctacat tctttaatca cccattcact tctaataaat
    24841 ataattgtga gatagcacgt gacgcgataa tatattgtat attggtactg tcatattcgt
    24901 tattccgcca tgaaatcaca gtatggtatt caaatccttt aacaagatca taaggaatga
    24961 ttatatgtcc tgctgttaca aacgaatcat cctcttcaat taatcttaat tttatgtcat
    25021 gtcgaagcgc actgtatagt tgctcccctt ctatacgaga gggtacgacg atcgctacgt
    25081 catgtgctac ctccattata atgtctttta catgttgtac tttagcactt gaaattttga
    25141 ttacagggtc accttcaaca cttacgactt ttgtatcagt atgcttaagt tcgtctaagt
    25201 agcgactgat tgccttcgta gagcgatatg aagtcgtcaa ctgttttatt gtcatatccc
    25261 agtcttcaaa ttcaatgaaa gattttggta agaaattttg attcaaatct cctaaaaatg
    25321 taaaattggc ctcatcataa cattgacgta aaatatctaa ttgaaatacg ctataatctt
    25381 gtacttcatc aactataata tgtttgaaaa gagagtgaga tcctcgcact atttttgtat
    25441 aaagccaaac aagtatccaa aagtcttcat atgccatcgc ttcttttttt aattggacgt
    25501 tcacttgaaa atctttacat aaacgttgat ataatttttc tatgttgata aagcggtacg
    25561 attgaatcat acgcttcaca cgttttaatg ttcgtgctgt cttagctttg gattgcgcta
    25621 caatttcgga cttttcaccg atgtaactat tttgattttc taattctgta tagttttgaa
    25681 caaataaacg tttgtaatca gcttggtaca atgccactaa attctgtttt aatttttgaa
    25741 ttgcagtcgt taaatcatga ttcacccgat acccgttaaa tatcatcgca atttcttctt
    25801 tagatatcac tatacgccct gtttgatcca ttacattttt aaaataaaat cgacatgtag
    25861 catttattaa ttgctttgaa atccattgaa aaaattctac actcgacttg cgataaaatt
    25921 gttgttctga cgctttatca cgatatattc gtgcgatcat gattctcttt ttttcaacat
    25981 gtatagactt aaaataagca atttccctga caatgttcat caaacttttc acttcgatat
    26041 gacgttcgcc aagttctggc aggacatccg aaacataatc atggaaaatg cgattaggtg
    26101 ctattaacat taaattttca tgtgtgattt ttttcttata tttaaatagc aaataagcaa
    26161 tacgttgcat agcgatggct gttttcccac tacctggcgg gccaagtacg acaacatctt
    26221 cattgattgg taaacgaata atttcatttt gatctttttg aattgtacta acaatattgc
    26281 ctaatttatg acgagaagtg ctcatctgat aatccattaa tcctgtatca ccaataaaca
    26341 tttcactatc gacataatca actaattgcc ctttaataat tttaaactga cgtctgcctt
    26401 tcacctcttc aaaaaagagc tgaccttttt cattttcata tgacaatcgc cctaattcat
    26461 tttcataaaa cagacttgca atcggagtcc tccaatcaca aactaataca cgataattgt
    26521 gatccatcaa agtttgagta cctatatata acgtttcatc ttccagtacc actttaccga
    26581 aataaggacg gtcaagtaaa ttttgataga gcttaagttt ctcgtggtac tgattataag
    26641 tacactcatc catccgtaaa gcatttaaat cttgcgcatt atcactacca ttgccattgt
    26701 ccatattgag tatccatgtc tcatgtgcat tcatctcttt acgtcgctca ataattttac
    26761 ttttaatgac gttttgagat ttggataacg tttttaatgc gttcttaatg aaatgttgcg
    26821 tctcatttaa atatgcttgt tcttcttcaa aactcattaa cacttgacat ccccctttat
    26881 atcaaacgac ttgattgaaa cgaaccttca tttttttgtc taataataaa gccaatacaa
    26941 tgaataattg aatacaacct gcaactaaat acacaaaatt tgcaccatat ttttcggtaa
    27001 tatatgcaga aaaataatag gacaatggta taaataaagt acttatcgac tg
//
LOCUS       DANHPA010000022        26945 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.022, whole genome shotgun sequence.
ACCESSION   DANHPA010000022 DANHPA010000000
VERSION     DANHPA010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 26945)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26945)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26945
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.022"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(42..1139)
                     /locus_tag="PTC28_000759"
     CDS             complement(42..1139)
                     /locus_tag="PTC28_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716073.1"
                     /translation="MEKYNRDLYTKGLESYEVPQYEPGYKPLDFVFGFVAGAVLGSAL
                     GLILKPGSAQQRRKSSQQTVNAEPSSALKEEAIRKAEALKAQARRVREESKTSTDEPT
                     ADELSAQQRAIRNEVDSDRLEGQTPREPSTSETTVATSTTEAVTATGLAQAANQRQSQ
                     KQQETEASALSTPSTENSTVAAQQRAIQSEVDSDRLQDTSVRGKDANVKVSDKGESEA
                     QSTQDSTVKAQQRAIRSEVDSDRLQDKGQSTNAQVNDQGKTVDAVKAEPTAAVPKNSH
                     SQATFENGVITHDRQGATTEKTTSQQGATKIANDQPTASKTKASASTSKSNSTSTAKK
                     ATSSKKTNGSKKVTEKAKKTNQKVEKHTFND"
     gene            complement(1235..1843)
                     /locus_tag="PTC28_000760"
     CDS             complement(1235..1843)
                     /locus_tag="PTC28_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF948 domain-containing protein"
                     /protein_id="HDK5716074.1"
                     /translation="MEWILPIAGIIAAIAFLILAIGIVAVLVSVKKNLDHVAKTLDGV
                     EGQIQGITRESTDLLHKANRLTEDVQDKANRLNSVVDAVKGIGDSVQTLNGSVDRVTH
                     SITHNISQNEDKISQVVQWSNVAMEIADKWQNRKSRRGSAAYKTNNVAADASRNASHN
                     GQSLSNEELVNNQYENKNINDFATNPSDVNTKYTTLNDTDSK"
     gene            complement(1922..3235)
                     /locus_tag="PTC28_000761"
     CDS             complement(1922..3235)
                     /locus_tag="PTC28_000761"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002484970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HDK5716075.1"
                     /translation="MTRYHFVGIKGAGMSSLAQIIYDLGYEVQGSDIDQYVFTEIALK
                     NKGIQILPFDADNIKEGLTIIQGNAFKDTHEEIARAHELGLKVIRYHDFLSEVINEYV
                     SVAVTGAHGKTSTTGLLSHVMNGDKKTSFLIGDGTGMGLPQSEYFAFEACEYRRHFLS
                     YSPDYAIITNIDFDHPDYFKDVDDVINAFQGMAKNVKKAIIAWGDDPYVKNIEVDIPV
                     YYYGFDTSMDVYAQNIEVTGSGTEFDVYVKGEFYGHFVSPQYGDHNILNALAVLTISY
                     LENLNLDNIKEALITFGGVKRRFNETFAQNQVLVDDYAHHPREISATIETARKKYPNK
                     EVVAIFQPHTFSRTKAFLQEFADVLNLADQTYLCDIFGSIRENQGELSINDLLKLVDG
                     AHLIDENSVEQLQKHDNAVLLFMGAGDIQKILKAYMEKIGVEQQF"
     gene            complement(3264..6482)
                     /locus_tag="PTC28_000762"
     CDS             complement(3264..6482)
                     /locus_tag="PTC28_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HDK5716076.1"
                     /translation="MSWFDQLFGENDKDQSSQRSTRRRKSEATREEKHASFVQQSQDV
                     YQRPRGKFRFPIEMHDEVVERHHQQADTTQTQDVTMHTQLHERRPSFTVDRQHRRHRG
                     VQQARCYEQQQTRGSNSTHSNSHQNDYTFAAQSSQHSKKPKRHRDDIVAKPNYHQKPF
                     QASEVPSAIFGTKQPKKIENSGLNQPPGARKAMPQLQKNERVVQEATPQAESTTTRQN
                     RTIERSGTSKSPTRRHNTIHIENIYASQIVEEIRREREKKMLQKKNFKEALKKKRESY
                     EQHANPDIQKAIDEMYSAQARQLLGDQYTESTDETISEDLLNEETVDATTEQNKDTTT
                     LTSNFEYEEVDLSEVESENHDESDSSTNEEIAENELDIEALSFEDESGISQVEDAQQH
                     RDTHAHTTTSDETTANKVETDASDIEFEVVEVDDDNALDDMITDETDGERIDSEIESD
                     SVDVDIEDEDVNEQQGQQVGSMPKLEPELKPELAQSNEALEKSVEKVTPQQNDTVTAE
                     QLSEATEVSQQTEQPKPYKVPIRKGSKPFNVVMTPSDKKRLMSRQQQAKKEEATEQPV
                     RPVQPVEQQSSSQLTTQHVHNETQTGDSQQPQSQQEVKTIRRGPNLKLPSLDLLEAPE
                     EQEQDENWIAEKKEELNNAFYYFNVPAEVVNVVEGPSVTRFELSVERGVKVSRITALQ
                     DDIKMALAAKDIRIEAPIPGTSLVGIEVPNPHTTKVNISSILSHPAFKNAESKLTVAM
                     GNRINNEPLLMDIAKTPHALIAGATGSGKSVSINSILISLLYRNHPEELRLLLIDPKM
                     VELAPYNGLPHLVAPVITDVKAATQSLKWAVDEMERRFKLFAHHHVRNISAFNNKVNY
                     DQRIPKIVIVIDELADLMMMAPQDVEQSIARLAQKARACGIHMLVATQRPSVNVITGL
                     IKANIPTRIAFMVSSSVDSRTILDSGGAERLLGYGDMLYLGSGMNKPIRVQGTFVSDE
                     EIDQVVEFIRAQREPEYLFQEKELLEKNDAPSRDELFDEVCKFMVREQHISTSLIQRH
                     FQIGYNRAARIIDQLEQLGYISGANGSKPRDVYLTESELSEL"
     gene            complement(6502..7101)
                     /locus_tag="PTC28_000763"
     CDS             complement(6502..7101)
                     /locus_tag="PTC28_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4479 domain-containing protein"
                     /protein_id="HDK5716077.1"
                     /translation="MNLFFNPTGVGNVAFLQLEQGEGPFEYERHGDVVAIKDNQKIVG
                     FNLFEATNHLNIEGIGHIKLTETLLTEIQKMIDHTDLDYQIEVDLSPKFVVGYVQSKE
                     KHPNADKLSIVQVDVGTETLQIVCGAPNIDQGQKVVVAKVGAVMPSGMIIKDAELRGV
                     PSSGMVCSMKELNLPNAPQEKGIMVLDDHYQVGQPFFDE"
     gene            complement(7107..7973)
                     /locus_tag="PTC28_000764"
     CDS             complement(7107..7973)
                     /locus_tag="PTC28_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1444 domain-containing protein"
                     /protein_id="HDK5716078.1"
                     /translation="MNVFKMRDLIKSRLTHLEVDYQFNRDEESLRIYRQDNHKGITVK
                     LSPVVAKYNKGQEKIVDEIIYYVEETIQQMKDESHKTLDEIRVMPVIRATSFDQQTKE
                     GKAFITEPHTAETRVYYALDLGKSYRLIDEDLMQSLNLSQQQLKEMAMFNVRKLNNSF
                     TTDEVKGNIFYFINKNDGYDASRIMNAKLLAEFEERCEGEMLVAVPHQDVLLIADIRN
                     KTGYDIMAHMTMDFFAKGLVPITSLSFAYENGHFEPIFILGKNNKQKPNDNPNVVHHL
                     RATKDINNNNEE"
     gene            complement(8066..8374)
                     /locus_tag="PTC28_000765"
     CDS             complement(8066..8374)
                     /locus_tag="PTC28_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDK5716079.1"
                     /translation="MIQLESEQQFKDFANDNTVFLFSANWCGDCRVIEPGLPELEEKY
                     AQFKFVKVDRDEFIDLAIEHDIMGIPSFLVYQNGQQVGSYIGKERKTIEQIDTFLSQF
                     "
     gene            complement(8386..9453)
                     /locus_tag="PTC28_000766"
     CDS             complement(8386..9453)
                     /locus_tag="PTC28_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HDK5716080.1"
                     /translation="MSNHTIDKIKTLTEMHGAPNFEQHVREYMKKMMAPYVDTFVDDR
                     MGGFYGVKKSGKPNAKRVMVAAHMDEIGFMITEVTPQGFIKFTALGGVANDIWQGQRL
                     KIMTQQGEEIIGVVANIPKHFRSGQEQAPRIEDLLLDIGESDADAVYNRGIQIGDAIV
                     PYTELLQLSEYRYAAKAWDNRYGCVITLELLEQLKDVTLDFDLYVGANVQEEVGLRGA
                     EVAARLVDPDVAFVVDCSPANDMKGRQGLSGVLGEGALLRIKDGTMLLKPAFKTFLQD
                     VALRHDVMYQHYISPGGTDGGAIHKANIGVPTAVIGVCARYIHSTDAVFDIRDYQAAK
                     TWLTASIQTLNLETIEQLQYQ"
     gene            9549..9866
                     /locus_tag="PTC28_000767"
     CDS             9549..9866
                     /locus_tag="PTC28_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716081.1"
                     /translation="MISKKNWPLLIPILILSLLAGSYFYVLNMNKQKYISADKVIQSV
                     KGYFRHVTGSYILYEPTTYRKFGIEYEVYKGGITAERHGKTFNYEFIADAYNGQIIDI
                     IEI"
     gene            complement(9933..10766)
                     /locus_tag="PTC28_000768"
     CDS             complement(9933..10766)
                     /locus_tag="PTC28_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDK5716082.1"
                     /translation="MQLGKLQIDPLNGGFTQMDGGAIFGVVPKPLWEREYPVNDKNQV
                     PLTTSPILIRTEDKNILIDTGIGKGKLTEKQLRNYGVRYESDIDASLAQFSLTCEDID
                     IVLMTHMHFDHATGLTDANGQAQFPNAWHYVQQDEWYEFIAPNIRSQATYWPINRGTY
                     EANLILFEDTIEPYPGIKMKHTGGHSFGHAVIEIESEGEKAVHMADILSTTAHRNPLW
                     VSAYDDYPMQSIREKERLTRYYVAHQYWFLFYHDVQHFAAKLSKDLKSVEASILREHV
                     D"
     gene            complement(11038..11691)
                     /gene="trmB"
                     /locus_tag="PTC28_000769"
     CDS             complement(11038..11691)
                     /gene="trmB"
                     /locus_tag="PTC28_000769"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HDK5716083.1"
                     /translation="MRMRNKPWAESYLTEHNDIVDLEAVHAHQVSEWFERQQPIHIEV
                     GSGMGKFITTLAQQNPHINYVAIERDKNVMIRVLDKVREHNLTNIKLLCNDAVILTDY
                     FRQGEVDRIYLNFSDPWPKKRHAKRRLTYRSFLALYQQILREDGELHFKTDNRGLFAY
                     SLESMSQFGMYFTKINLNLHQEDEGDNIPTEYEHKFAEKGSRIYRMEAKFHSKQTTE"
     gene            complement(11707..12498)
                     /locus_tag="PTC28_000770"
     CDS             complement(11707..12498)
                     /locus_tag="PTC28_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001602611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HDK5716084.1"
                     /translation="MEQFYQLGWTLDSAGGASGEAYMAEQDGQKLFLKRNSNPFIAAL
                     SAEGIVPKLVWTKRIETGEVVTAQHWKNGRELESQEMAQNRVAHLLKKIHQSKPLLTM
                     LKRMEMAPITPEIMLHKINASLSRDVLTHHIVRKALTYLEDHMPEFDPRFYTVVHGDV
                     NHNNWLLSDKDELFLVDWEGAMIADPAIDIGMLLYNYVPEAQWSSWFDTYEVKETMNL
                     KKRMKWYTVIQSIGMIQWNEEHKRYKDMNTWLKFLNEVMKSNVFI"
     gene            complement(12731..13579)
                     /gene="dat"
                     /locus_tag="PTC28_000771"
     CDS             complement(12731..13579)
                     /gene="dat"
                     /locus_tag="PTC28_000771"
                     /EC_number="2.6.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino-acid transaminase"
                     /protein_id="HDK5716085.1"
                     /translation="MTKVLINESFVEESEAKVAFNDRGYNFGDGIYEYVRIYDNKLFT
                     AKEHFERLLRSASEIGLELNYTVESLTELVRELAQVNNVTNGGVYMQVTRGAAPRDHA
                     FPTPSVEPVLTAFVKSYDRPFKALEEGVSVVTTDDIRWLRCDIKSLNLLGNVLAKEYA
                     TKYNATEAIQHRDGTVTEGASSNVYAIKDGVVYTHPANNLILKGITRQVIKWICDDEQ
                     ITFKDEAFSLAFLKDADEVIISSTSAEVMPVVKIDGEVVNDGEVGPITRRLQEGFERY
                     IHSHSH"
     gene            complement(13583..14992)
                     /gene="pepV"
                     /locus_tag="PTC28_000772"
     CDS             complement(13583..14992)
                     /gene="pepV"
                     /locus_tag="PTC28_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase PepV"
                     /protein_id="HDK5716086.1"
                     /translation="MWREKVQEYETQMIEDLKGLLAIKSVRNDTEATEDAPVGPGPKA
                     ALEYMYQLAERDGFNTFDTDHLAGRIEIGKGEELFGILGHVDVVPAGDGWDSDPFDPV
                     ETDDRIVARGTLDDKGPTIAAYYAVKILNDMNVDWKKRIHIIIGTDEESEWKCTERYF
                     KTEEMPTIGIAPDAEFPLIHGEKGITTFTIKQQTLTLDDDEPEIELKQFASGERFNMV
                     PDVANADILVKENMTDTIQRFEAFLSEHQLEGHHEIDSGILKLTVFGKAVHGMDPSIG
                     VNAGLYLIHFLNTLNLNQSAQSWTAFGEKYLFDSHFGEKMGMKFHSDSMGDLTTNIGV
                     IRYDLDEGGSFGINLRYPEGFDFDRAISDFTAEIQALGFDIEGLKVQTPHFVNPEDPF
                     VQKLLTAYRNQTGDMRPSFTIGGGTYARNLDKGVAFGAMFEDSEDLMHQKNEYITKKQ
                     LFNATSIYLEAIYAVCVEG"
     gene            complement(15315..15713)
                     /locus_tag="PTC28_000773"
     CDS             complement(15315..15713)
                     /locus_tag="PTC28_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HDK5716087.1"
                     /translation="MAKSGKLFKAILGIGGAVAAVVLSNKQNRENLKQEYQKYKENPE
                     DYKKRAQEKAAQVSEAATQEFNKVKENPKAYINEAKQDPKSFINEKKEQLLNSEQQDN
                     LDDREALFDDEGGGDSSHNLHVVRDNEPNK"
     gene            complement(15797..16495)
                     /locus_tag="PTC28_000774"
     CDS             complement(15797..16495)
                     /locus_tag="PTC28_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HDK5716088.1"
                     /translation="MRIDKFLAQMGVGTRTEVKALLKKGHVLHNGAKIKSSKTQIDPE
                     HDVVEVKGRVIAYEPFVYLMMNKPQNVISATVDDQHQTVIDIIEGYRHLDLFPVGRLD
                     KDTEGLLLITNDGQFNHALMNPNKHVSKTYWVKAKYALKTNDPKRFEEGITLKEGRLQ
                     PAHLEILDDSMTAFVTIQEGKYHQVKRMFHAIDNEVVGLKRVSIGDLTLDSSLSPGAY
                     RSLTEDELKLLNYR"
     gene            complement(16495..18129)
                     /locus_tag="PTC28_000775"
     CDS             complement(16495..18129)
                     /locus_tag="PTC28_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HDK5716089.1"
                     /translation="MSENKELVRGTFLLTLSILITKVLGIIYVIPFYQIIGGADNLAP
                     FNYAYGPYNVAIAVATAGVPLAASKYVAKYNTLGAYRVSQKLYKSSFIVMSITGILGF
                     VILYLLSPMIASVTIAHNMDKNAGWTVDQITAIIRTISFVVIFIPVLATWRGVFQGYK
                     SMGPTALSEVTEQIARIIFILVGSYLVLNVFDGSVLLANGIATFGAAIGAIAGILTLW
                     WYWIKRRRGIHEMVASDMTGIDVSYSKMYKEILSYSIPFVIVSLNFPLFMIVDQLTHN
                     NALSIAGVETSLQGTFFTMLNMTTNKIVMIPTSLAAGFAISLIPFITKTYEKGDYVEM
                     HRQIRTSLGVLMYITVPASLGIMALAVPLYTVFYEYSMDGSRLLFYYAPVAILISLLS
                     VTASMLQGIDKQKLTVFVIVGSVVLKFILNMPLIIMFETAGAILSTAIALTFAIVCNF
                     FILKKYARFKFNETIIDVCKILLYSFMMMIIVEIIYFGLQFVISPASHVGAFIITVIC
                     AIVGVIIYAVLTMRTRLADKFLGEIPNKIRRKVSFL"
     gene            18246..19502
                     /locus_tag="PTC28_000776"
     CDS             18246..19502
                     /locus_tag="PTC28_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDK5716090.1"
                     /translation="MYQTIVIGGGPSGLMAAISSSQNGQPVLLLEKKKGLGRKLKISG
                     GGRCNVTNNLPYAEIIQHIPGNGKFLYSPFSIFDNQSIIEFFESRGVALKEEDHGRMF
                     PVSNQSQDVLDALIRELKQNKVTVKEEQTVVDVKKVDSDHFQVQLQDGDTYKAKTVII
                     ATGGTSVPQTGSTGDGYRFAQSLGHHITELFPTEVPIKSNAPFIKNQSLKGLSLKNVG
                     LSVLKKNGKKRITHQMDMLFTHFGISGPAALRCSQFIYHEQKSQKQQNIQMQIDAFPE
                     INEEALKQKITKQLKSQPDKHIKNALKGLIEERYLTLIIDSAGIPFETTYHHISAQQL
                     STLAHQFKAFTFEVYGTLPLEKAFVTGGGVSIKEIVPTTMESKITPGLYLCGEVLDIH
                     GYTGGYNITSALVTGYVAGYFAGFVE"
     gene            complement(20127..20438)
                     /locus_tag="PTC28_000777"
     CDS             complement(20127..20438)
                     /locus_tag="PTC28_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDK5716091.1"
                     /translation="MKEITTDELKEIVLSSEPVNIVDVREDEEVAMGMIPNAEHIPMN
                     DIPDHVDDFKKDTTYYIVCAGGVRSAKVVAFLNDHGIDAVNVEGGMRAWGEEGLEFKR
                     I"
     gene            complement(20465..22879)
                     /locus_tag="PTC28_000778"
     CDS             complement(20465..22879)
                     /locus_tag="PTC28_000778"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HDK5716092.1"
                     /translation="MVSYNHQEVEKKWQTYWLENKTFKTEDNIGQKKFYALDMFPYPS
                     GAGLHVGHPEGYTATDILSRYKRMQGYNVLHPMGWDAFGLPAEQYALDTGNDPAEFTK
                     RNIQTFKRQIQELGFSYDWDREVSTTDPEYYKWTQWIFIQLYKKGLAYIDEIPVNWCE
                     ALGTVLSNEEVVDGVSERGGYPVVRRPMKQWVLKITEYADRLLEDLDTLDWPESIKDM
                     QRNWIGRSEGAKVNFKVENINTPIEVFTTRPDTIYGATFLVLSPEHTIVNRITTPQQY
                     EKVKHYQDEAAKKSDLERTDLAKEKTGVFTGAYAIHPFTGKQVPIWIADYVLASYGTG
                     AVMAVPAHDERDYEFATTFDLPVVTVIENDAETPYYTGDGAHVQSGELDGLNNEAAIA
                     KAIELLEAKGLGEKKVNYKLRDWLFSRQRYWGEPIPIIHWEDGSMTTVPENELPLLLP
                     KTDEIKPSGTGESPLANIDDFVNVVDPETGMKGRRETNTMPQWAGSCWYYLRYIDPKN
                     DQMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTSEPFQKLFNQ
                     GMILGEGNEKMSKSKGNVVNPDDIVRSHGADTLRLYEMFMGPLEASIAWSENGLDGSR
                     RFLDRVWRLFVTEDSQLTDKVIEGDTPALQTVYHQTVKKVTEDFESLSFNTAISQLMV
                     FINECYKADNISKAYAEGFVKMLAPIAPHVGEELWSILGHDTTITYQPWPSFDPSLLE
                     EDVVEIVVQVNGKVRAKIEIPKDMSKADMEATALANDNIKAAVEGKDVKKVIAVPQKL
                     VNIVAK"
     misc_binding    complement(22927..23118)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            complement(23188..24369)
                     /locus_tag="PTC28_000779"
     CDS             complement(23188..24369)
                     /locus_tag="PTC28_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5716093.1"
                     /translation="MNMPKEIWWLVIGMAINITGASFLWPLNTIYMNEELDKSLSTAG
                     LVLMVNSFGMIVGNLLGGTLFDKLGGYRTIMLGTIVSLCATILLNFFHGWPWYAIWLI
                     MLGFGGGMIIPAIYAMAGAVWPQGGRQTFNAIYLAQNIGVALGAALGGFVAELSFNYI
                     FMANLAMYVIFFFIALFQFNMDYQATVKHQETLENVAHIQNKKHFTALILLCVMFALC
                     WIAYVQWQTTIASFTQSIGISMSQYSLLWTVNGVLILVGQPLILPIIHLIKGQLKKQL
                     YFGLVVFILSFFVTSFATSFSIFVVGMVIMTFAEMFVWPAVPTIANNLAPKGREGVYQ
                     GIVNSASTVGKAFGTLVGGILVDVFNMQIMFLSMIGLLVIAMAFLTIYDRKVDPKTLY
                     R"
     gene            24517..25470
                     /locus_tag="PTC28_000780"
     CDS             24517..25470
                     /locus_tag="PTC28_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613608.1"
                     /note="This family includes YhcC from E. coli K-12, an
                     uncharacterized radical SAM protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01212 family radical SAM protein"
                     /protein_id="HDK5716094.1"
                     /translation="MGTYFPYAFEKKRYHTLNYHLKNKFGQKIFKVALDGGFDCPNRD
                     GTVAHGGCTFCSAAGSGDFAGNRADAIEVQFKEIKNKMHEKWHEGQYIAYFQAFTNTH
                     APVAVLREKFEAALKEPGVVGLSIGTRPDCLPDDVVDYLAELNERTYLWVELGLQTIH
                     QETSDLINRAHDMDCYYEGVAKLRRHNIKVCSHIINGLPGEDYDMMIETAKAVAQMDV
                     QGIKIHLLHLLKGTPMMKQYDKGLLEFMTKEQYIQLVCDQLEQLPPEMIVHRITGDGP
                     IDLMVGPMWSVNKWEVLNEIDAELERRGTVQGASYSSQVHI"
     gene            25467..26030
                     /locus_tag="PTC28_000781"
     CDS             25467..26030
                     /locus_tag="PTC28_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDK5716095.1"
                     /translation="MIVERILPFAKSLIRSHTTSESVVIDATCGNGHDTKFLADLVPH
                     GHVYGCDIQQEAIENTKQRVHDYNNVSLFHTGHEWITQYIRDEHLTQVHAAIFNLGYL
                     PKGDKSIVTQSTTTLAAVQTIFDILQPEGIIVLVVYPGHEEGKEESMTLMKHLAAFDQ
                     QRAHVLKYEFINQQNRPPYVIAIEKRA"
     gene            complement(26533..26943)
                     /locus_tag="PTC28_000782"
     CDS             complement(26533..26943)
                     /locus_tag="PTC28_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDK5716096.1"
                     /translation="MTEKNNYKVSDIMRLDQLQKEVEAIFEEIEGKYRLSKEEFLILL
                     TLWDQGSMTLKEMDDYVKVKTYKRTRTYNNLVEMKWIVKERPTNDERTVIIHFNEDKE
                     ADKQDLINFTCMEIEKRDAHLRTLLNDIVNGCDI"
BASE COUNT         7899 a         5728 c         4507 g         8811 t
ORIGIN      
        1 caatgagata ttaagttatc attttatcat acacttcacg attaatcgtt aaatgtatgc
       61 ttttctactt tttgatttgt ttttttagct ttttccgtta cttttttact accatttgtt
      121 ttcttagatg acgttgcttt tttggcagtt gaagtgctgt ttgattttga cgttgaagcc
      181 gatgctttag ttttgctagc tgttggttga tcgtttgcaa tttttgtagc accttgttgt
      241 gacgtagttt tttctgttgt cgcaccttga cgatcgtgtg taatcacacc gttctcaaat
      301 gtcgcttgac tgtgggaatt ttttggtact gctgcagttg gctctgcttt tacagcgtcg
      361 actgtttttc cttgatcgtt cacttgtgca ttcgtacttt gacctttgtc ttgtaaacgg
      421 tccgaatcga cttcactacg aatggcgcgc tgttgagctt ttactgtact gtcttgagtt
      481 gactgggctt cagattcacc tttatcactc acttttacat ttgcatcttt gccacgtaca
      541 gacgtatctt gcaaacggtc tgaatccact tcgctttgaa tcgcacgttg ttgtgcagct
      601 actgtactat tctctgttga tggcgttgat agcgctgatg cttcagtctc ttgttgcttt
      661 tgagattgtc tttgatttgc agcttgagcc aaacctgttg ccgttacagc ttctgtcgtt
      721 gatgtcgcaa cagttgtttc tgaagtcgat ggttcacgtg gtgtttgacc ttctaatcga
      781 tctgagtcca cttcattacg aatggcacgt tgttgtgctg acaattcatc agctgtcggt
      841 tcgtccgttg atgtttttga ttcttctcta acacggcgcg cttgtgcttt taatgcttct
      901 gctttacgga ttgcttcttc cttaagtgca gaagatggct cagcatttac tgtttgttgt
      961 gaacttttac gtcgttgttg tgcagaacct ggttttaaaa ttaatcctag tgcacttcct
     1021 aaaacagcgc cagcaacaaa gccaaataca aagtctaaag gcttatatcc tggttcgtac
     1081 tggggaactt catagctttc taaacctttc gtatataaat cacggttata tttttccatc
     1141 ttctatttgc gcctcctata ataaatgcac ttaaatcaag tatgaaaact catttaagtg
     1201 cattctgttt aaagcttatt taacatgaca acacttattt tgaatctgtg tcattcaatg
     1261 ttgtgtattt tgtgtttaca tcactcggat ttgttgcgaa atcgttaatg tttttgtttt
     1321 catattggtt gtttactaat tcttcattag ataaagattg accattatga cttgcattac
     1381 gacttgcatc agctgctacg ttgttcgttt tgtatgctgc actaccgcga cggctttttc
     1441 tattttgcca tttgtcagcg atttccattg caacgtttga ccattgaaca acttgtgaaa
     1501 ttttgtcttc attttgagaa atgttatgcg tgattgagtg tgttactcga tcaacagaac
     1561 catttaatgt ttgtactgaa tcaccaatac ctttaaccgc atctacaaca gagtttaagc
     1621 gattggcttt gtcttgaacg tcttcagtta aacgattcgc tttgtgtaac aagtctgttg
     1681 actcacgtgt aatcccttga atctgacctt ccacaccatc aagtgtttta gccacatgat
     1741 ccaagttctt tttaacagaa accaatacag caacgatacc gattgctaaa ataagaaaag
     1801 caattgctgc gatgattccc gcgataggta aaatccattc cattcctaaa cgcctcctaa
     1861 ttgacttaaa ataatatgct atttatttta attaaatacc caacctatgc gaactcaaac
     1921 attaaaactg ctgttcaaca ccaatttttt ccatgtatgc tttaagaatt ttttgaatat
     1981 ctcccgcacc catgaataaa agtacagcat tgtcatgttt ttgcagttgt tccacactat
     2041 tttcatcaat caaatgcgcg ccatcgacta attttaataa atcattaata gacaactcgc
     2101 cttgattttc acgaattgaa ccaaatatat cacagagata cgtttgatca gcaaggttta
     2161 acacatctgc aaactcttgt aaaaatgctt tcgttcttga gaaagtatgt ggttggaaaa
     2221 tagccactac ttctttattt ggatattttt ttctagctgt ttcaattgta gcactaattt
     2281 ctctcggatg gtgtgcataa tcatcaacca acacttgatt ttgagcaaat gtttcattaa
     2341 agcgacgttt cacgccacca aaagtgatta atgcttcttt aatgttatca agatttaagt
     2401 tttcaagata actaatcgtt aataccgcta atgcattcaa aatattgtga tccccatatt
     2461 gcggtgaaac aaaatggcca tagaattcgc ctttaacata aacatcaaat tctgtaccac
     2521 tacctgtcac ttcaatattt tgtgcataaa catccatcga cgtatcgaaa ccatagtaat
     2581 acactggaat atctacttca atatttttaa cgtatggatc atcgccccat gcaataatcg
     2641 cttttttaac atttttcgcc ataccttgga atgcattgat gacatcatct acatctttaa
     2701 agtagtctgg atggtcgaaa tcaatgttcg taatgatggc ataatccggt gaatagctta
     2761 aaaagtgacg tcgatactca cacgcttcaa atgcaaaata ttcactttgc ggcaagccca
     2821 tgccagtccc atcgccaatt aaaaaggatg tctttttatc cccattcatg acatgagaaa
     2881 gtagccccgt tgtagatgtt ttaccgtgag cacctgtcac tgccacagaa acatattcat
     2941 taatcacttc acttaaaaag tcatgatagc gaataacttt taatccgagt tcatgtgcgc
     3001 gagcgatttc ttcatgggta tctttaaagg cattaccttg aatgatcgtt agcccttctt
     3061 taatattatc cgcatcaaaa ggtaaaattt gaatgccttt attttttaat gcaatttcag
     3121 taaaaacgta ctgatcgatg tctgatcctt ggacctcata accaagatca taaataattt
     3181 gtgctaatga gctcatacca gcacctttaa taccaacaaa atggtatcgt gtcattgtgt
     3241 catcgctcct ttctctattt ccattaaagc tcacttaatt ccgactctgt caaataaaca
     3301 tcacgtggtt tagaaccatt tgcccctgag atataaccca attgttcaag ttgatcaata
     3361 atgcgtgctg cacggttata accgatttgg aaatggcgtt gaattaatga cgttgaaatg
     3421 tgctgttctc tcaccataaa tttgcacact tcatcaaaga gttcatctct gctcggtgca
     3481 tcattttttt ctaacaactc tttttcttgg aataagtatt ctggctcgcg ttgcgcacgt
     3541 atgaattcta caacttgatc aatttcttca tctgatacaa acgtgccttg taccctaatc
     3601 ggtttgttca taccacttcc taaatacagc atatcgccat aaccaagtaa acgttcagca
     3661 ccgccactat ctagtattgt tctagagtcc acactagatg ataccataaa tgcaatacga
     3721 gttggaatat ttgctttaat taatcctgtg atgacgttca ctgatggacg ttgagtcgca
     3781 acaagcatat gaatcccaca agcacgtgcc ttttgagcta atcgcgcaat agattgttcg
     3841 acatcttgcg gtgccatcat catcaggtca gccaattcat caatcacgat gacaattttt
     3901 ggaatacgtt gatcataatt tactttgtta ttaaatgcag aaatgttacg aacgtgatga
     3961 tgtgcaaaca atttaaaacg acgttccatt tcatcgacag cccatttcaa actttgagtt
     4021 gcagctttca catcagtaat gacaggcgca accaaatgtg gcaagccatt atacggtgca
     4081 agctctacca ttttagggtc aataagtaac agtctcagct cttctggatg attgcgatac
     4141 aataaggaaa ttaaaatact gtttatcgat acagattttc ctgaacctgt cgcacctgca
     4201 attaaggcat gcggtgtttt tgcaatatcc atcaacaatg gttcattatt aatacgattc
     4261 cccatcgcca ctgtcagttt agattctgca tttttgaacg ccggatgact taaaatagaa
     4321 ctaatattca cttttgtggt atgtggattt ggcacttcaa ttccgactaa acttgtacct
     4381 ggaatcggtg cttctatacg aatatctttt gctgccagtg ccatcttaat atcgtcttgc
     4441 aatgcagtaa tgcgcgaaac tttgacgcca cgttccaccg acaattcaaa acgcgtcaca
     4501 cttggtcctt cgacaacatt tacgacttct gcaggtacat taaagtagta aaatgcgttg
     4561 ttcaactctt cttttttctc agcaatccaa ttttcatctt gttcttgttc ttcaggtgct
     4621 tcgagcaaat caagactcgg taactttaag tttggaccac ggcgaatcgt tttcacctct
     4681 tgttgtgact ggggctgctg actgtctccc gtttgcgttt cgttatgtac atgttgcgtt
     4741 gtcaattgag atgatgattg ttgttcaact ggttgtacag gacgcactgg ttgctcagtt
     4801 gcttcctctt ttttcgcctg ttgttgacgt gacatcagtc tctttttatc tgaaggtgtc
     4861 atgacgacgt taaacggttt gctacctttt cgaatcggta ctttatacgg cttcggttgt
     4921 tcagtctgtt gggatacttc agtcgcctca gacagttgtt ccgctgttac cgtatcattc
     4981 tgttgtggcg tcaccttttc aacagacttc tcaagcgctt cattagattg tgcaagttct
     5041 ggcttcaact caggttcaag tttcggcatg gagccaacct gttgtccttg ttgttcgttt
     5101 acgtcctcat cttctatgtc tacatctact gagtcgcttt caatttcact gtcaatacgt
     5161 tcaccatccg tttcatcagt gatcatatca tcaagtgcgt tatcatcatc aacttcaacg
     5221 acttcaaact caatatccga agcgtcagtt tcaactttgt tcgctgtggt ttcatccgat
     5281 gttgttgtgt gcgcatgagt atctcgatgt tgttgtgcat cttccacttg agatataccc
     5341 gattcatctt caaacgacag cgcttcaata tctaattcat tttcagcaat ctcttcattc
     5401 gttgacgagt cactctcatc atgattttct gactcaactt ccgataaatc gacctcttca
     5461 tattcgaagt tagacgtcaa tgtagtggta tccttatttt gttcagttgt tgcatctact
     5521 gtctcttcgt tgagtaaatc ctcagagatg gtttcatcag tcgattcagt atactggtca
     5581 cctaacaatt gacgtgcttg tgcagaatac atttcatcaa tcgctttttg aatatcggga
     5641 tttgcatgtt gttcataaga ttcccgtttc tttttaagcg cctctttgaa gtttttcttc
     5701 tgcaacattt tcttttcacg ttctcgacgt atctcttcta caatttgaga agcataaata
     5761 ttttcgatat gaattgtgtt atgacggcgt gttggtgatt ttgatgtccc agaacgttct
     5821 attgttcggt tttgtctcgt tgttgttgac tctgcttgtg gtgttgcttc ttggactaca
     5881 cgttcattct tttgcaactg aggcatagct ttacgtgctc caggtggttg attcaatcca
     5941 ctgttttcaa ttttttttgg ttgtttcgta ccaaaaatag ctgacggtac ttcactcgct
     6001 tggaatggtt tttgatgata attcggctta gcaacaatat catcacgatg acgttttggt
     6061 ttttttgaat gttgtgaaga ttgtgcagcg aatgtatagt cgttctgatg agaattacta
     6121 tgcgttgaat ttgaaccacg tgtttgctgt tgttcatagc aacgcgcttg ttgtacacca
     6181 cgatgtcgac gatgttgacg atcaacagta aaggaaggac gtcgctcgtg tagttgtgta
     6241 tgcatggtca catcttgtgt ttgcgtcgtg tctgcttgtt gatggtgacg ttcaaccact
     6301 tcgtcatgca tctcaatcgg aaaacgaaac ttcccacgag ggcgttgata aacatcttga
     6361 ctttgttgaa cgaaagacgc atgtttttct tcgcgcgttg cttcactttt tcttcttcgt
     6421 gttgaacgtt gtgacgattg gtctttatca ttctcaccaa ataattgatc aaaccagctc
     6481 atttaatttc acaaccttcc tctattcatc aaaaaatggt tgacctactt gataatgatc
     6541 atctaatacc ataatgcctt tctcttgtgg tgcattcggt aaattcaact ctttcattga
     6601 acataccatt ccacttgaag gtacacctct taattcagca tctttaatga tcattccact
     6661 tggcattacc gcacctactt ttgcgacaac gaccttttga ccttgatcaa tattaggtgc
     6721 accacaaaca atttgtaatg tttcagtacc aacatctact tgaacaatgc ttaatttgtc
     6781 agcattcggg tgtttttctt tcgattgaac ataacctacg acaaattttg gtgacaagtc
     6841 tacctcaatt tgataatcaa ggtccgtatg atcaatcatc ttttgaattt ctgtaagcaa
     6901 cgtctccgtc aatttaatat gcccgatgcc ctcaatattc aaatgatttg tcgcttcaaa
     6961 taaattaaaa cctacaattt tttgattgtc tttaatagcg acgacatcac cgtgacgttc
     7021 atattcaaat ggcccttcac cttgttcaag ttgtaaaaat gccacatttc ctacaccagt
     7081 tggattaaaa aacaaattca tcttcattac tcctcattgt tattgttaat atctttcgtt
     7141 gctcgtagat gatgaacaac gttaggatta tcattcggtt tttgtttatt gtttttacct
     7201 aaaataaata tcggttcaaa atgaccgttc tcataggcaa aagaaagtga tgtaattggt
     7261 acaagccctt ttgcgaaaaa atccatcgtc atgtgtgcca taatatcgta acctgtttta
     7321 ttacgaatat ctgcaatcag caacacatct tgatgaggaa ccgcaacaag catttcccct
     7381 tcacaccgtt cttcaaattc agctaataat tttgcattca taattcgact tgcatcatag
     7441 ccatcatttt tattaataaa ataaaaaatg ttccctttga cctcatcagt cgtaaatgaa
     7501 ttgtttaatt ttctaacatt aaacatcgcc atttctttaa gttgttgctg ggacaaattt
     7561 aaagactgca ttaaatcttc atcaatcaaa cgatatgact ttccgagatc gagtgcataa
     7621 tacacgcgtg tttcagcggt atgaggttca gtaataaatg ccttcccttc tttcgtctgt
     7681 tgatcaaaac ttgtcgcacg aatcacaggc atgacacgaa tttcatctaa tgttttatgt
     7741 gattcatctt tcatttgttg aatcgtttct tctacataat aaataatctc atcaacaatc
     7801 ttttcctgtc ctttattata tttggcaaca actggagaaa gtttaacagt gatcccttta
     7861 tgattatctt gtcgataaat tcttaatgat tcttcgtcgc gattaaattg ataatccact
     7921 tctaaatgtg ttaatcgcga tttgattaag tctctcattt taaagacatt catgttttca
     7981 ctcctaatta cacgccttat attagtttac aataaatata cccttaggac tagaaaaaaa
     8041 ccatgtccta agggttaaaa tctcattaaa attgactgag aaatgtgtca atctgttcaa
     8101 ttgtttttct ttctttacca atgtatgaac cgacttgttg tccattttga tatacgagga
     8161 agcttggaat gcccataata tcatgttcaa tcgctaaatc gataaattca tcgcggtcga
     8221 ctttcacgaa tttaaactgt gcatatttct cttctaactc tggtaatcct ggttcaatga
     8281 cacgacagtc accacaccaa tttgcgctaa ataaaaatac agtattgtcg ttagcaaagt
     8341 ctttaaattg ttgttcgctt tctaattgaa tcatcttcgt cactcctatt ggtattgtaa
     8401 ttgttctatc gtttcaagat ttaatgtttg aatcgatgcc gttaaccacg tttttgcagc
     8461 ttgataatct cgaatatcaa atacggcatc cgtactgtga atatagcgtg cacatacacc
     8521 gataacagct gtagggacac cgatattcgc tttatgaatt gcaccaccat cagtaccgcc
     8581 gggtgaaatg taatgttgat acataacatc atgacgtaac gcaacatctt gtaaaaatgt
     8641 tttaaatgcc ggttttaaca acatcgttcc atctttaata cgtaataatg ctccttctcc
     8701 gagcacaccg gataaacctt gtcgaccttt catgtcattt gcaggggagc agtccacaac
     8761 gaatgctaca tccggatcca ctaaacgtgc tgccacttct gcaccacgga gaccaacttc
     8821 ttcctgaaca ttcgcaccga cgtacaaatc aaagtctagt gtcacatctt ttaactgttc
     8881 taacaattct aacgtaatga cgcaaccata acgattatcc caagccttcg cagcatagcg
     8941 atattcggac aattgcaata gttctgtata aggtacgatc gcatctccaa tttgaatacc
     9001 tctgttatat acagcgtcag catcactttc tccgatatct aagagcaagt cttcaatacg
     9061 tggcgcttgt tcctgaccac ttctaaaatg ttttgggata ttcgcaacaa caccaataat
     9121 ttcttcacct tgttgcgtca taattttcaa gcgttgacct tgccaaatat cgtttgcaac
     9181 acccccaagt gcagtaaact taataaagcc ttgtggtgtc acctcagtaa tcataaagcc
     9241 gatttcgtcc atatgtgccg ccaccatgac acgttttgca tttggcttac cacttttttt
     9301 tacgccataa aaaccaccca tacgatcatc tacaaacgta tctacgtaag gtgccatcat
     9361 ttttttcata tattcacgga catgctgttc aaagttagga gcaccatgca tttccgttaa
     9421 tgttttaatt ttatctattg tatgattcga catgacgcac actcctctca atttttattc
     9481 tctttactta gtatatcatc tttattgtgg taaactataa ttaagtcttc aataaggaga
     9541 tgtagaaaat gatatcgaaa aaaaactggc ctttattgat tcccatttta atccttagcc
     9601 ttttagcagg aagttatttt tacgtgctga atatgaacaa gcaaaaatac atatcagcag
     9661 ataaagtcat ccaatctgtg aagggctatt tcagacatgt cacaggctct tatattttgt
     9721 atgaaccaac gacatatcgt aaattcggta ttgaatatga ggtttataaa ggcggcatca
     9781 ctgctgagcg acacggaaaa acatttaact atgaatttat tgcagatgca tataatggcc
     9841 aaatcattga tattatagaa atctaacgtt gctcatctca aaggtgaacc agcatagtca
     9901 catttattgt ggtatgttgg ttcactttct ttttaatcaa catgctcacg taaaattgac
     9961 gcttcgacac tttttaagtc tttgctcaat ttcgccgcaa aatgttgaac atcatgataa
    10021 aacagaaacc aatattgatg tgcgacatag taacgtgtga gtcgctcttt ttcacgaata
    10081 gattgcatag gataatcatc gtaagcagag acccataatg gattgcgatg tgcagtcgta
    10141 cttaaaatat ccgccatatg cacagctttt tcaccttcac tttctatctc gatgacagca
    10201 tgaccaaaac tatgaccacc ggtatgtttc attttaattc ccggataagg ctcaatagta
    10261 tcttcaaata aaatcaaatt cgcttcatag gttcctctat ttataggcca atacgtcgct
    10321 tgacttctaa tattaggtgc aataaattca taccattcat cttgttgaac atagtgccac
    10381 gcattaggaa attgcgcttg accgttcgca tctgttaacc ctgtcgcatg atcaaaatgc
    10441 atatgcgtca ttaacacaat atcgatatcc tcacatgtta gtgagaattg tgcgagtgat
    10501 gcatcaatat ccgattcata gcgtacacca taattacgca actgcttctc ggttaatttt
    10561 cctttaccaa tcccagtgtc tattaaaata tttttatctt cagttcgaat cagtatgggg
    10621 gaagtcgtta atgggacttg gttcttatca ttcactggat attcacgttc ccataacggt
    10681 ttaggaacga caccaaaaat cgccccaccg tccatctgtg tgaatcctcc gtttagtgga
    10741 tcaatttgta acttgcctaa ttgcatatcg aacacctcaa tttcatttta cgcatttcca
    10801 ttatcaacga aagcatagtc cggtttcaac tctcaacact cgtgaggttg ggacatagaa
    10861 acgtttgagt ttcaatctat tcatagattt atgattcatt agtaatttta aagtagatgg
    10921 aaaatgtcag gaaatgagat acaaaaaatt gcatcaatag catcaaaatt tttatgtccc
    10981 atccaaatca aaaaagcaat gcgggcgatt tggagtcaca cacattgctt ttataaatta
    11041 ttcggttgtc tgtttagaat gaaattttgc ttccattcga taaatacgtg aacctttttc
    11101 ggcaaattta tgttcatact cagtcggaat attatcccct tcgtcttctt gatggaggtt
    11161 caagttaatt tttgtaaaat acatgccgaa ttgagacata ctctcaagac tatatgcaaa
    11221 caatccgcga ttatctgttt taaaatgaag ctcaccatct tcacgaagga tttgttgata
    11281 gagcgctaaa aagctacggt aagttaatcg acgtttggcg tgccgttttt tcggccatgg
    11341 atcagaaaag tttaaataaa ttcggtccac ttcgccttga cgaaaatagt ctgttaaaat
    11401 gaccgcatcg ttacataata atttaatatt cgttaagtta tgttcgcgta ctttatccaa
    11461 cacacgaatc atcacatttt tatctctttc aatggcaaca tagttaatat gtggattttg
    11521 ctgagctaag gtcgtaataa acttgcccat gccagaaccg acttctatgt gaatcggctg
    11581 ttgtcgttcg aaccactcac tcacttgatg ggcatgtacg gcttctaaat ccacaatatc
    11641 gttatgctca gttaagtaag actcagccca cggtttattt cgcattctca tgattattca
    11701 tactccctaa ataaatacat tactcttcat gacttcattt aagaatttga gccaagtatt
    11761 catatcttta taacgtttat gttcttcgtt ccactgaatc ataccaatag actgaatcac
    11821 cgtataccat ttcatacgtt tttttaaatt catcgtttct ttcacttcat atgtgtcaaa
    11881 ccaactcgac cattgcgctt caggcacgta gttgtagagc agcataccga tatcaatggc
    11941 agggtcagca atcatcgcac cctcccaatc gacgagaaag agttcatctt tatctgataa
    12001 aagccagtta ttatgattga catccccgtg aactaccgta taaaaacgtg gatcaaactc
    12061 cggcatatgg tcttccaaat acgttaaagc ctttctcacg atatgatgcg ttaacacatc
    12121 acgagacaaa gaggcgttaa ttttatgcaa cataatttca ggtgtgatag gcgccatctc
    12181 catacgcttc aacatcgtta acaatggttt tgactgatga atttttttca acaaatgcgc
    12241 cacacgattt tgggccattt cttgcgattc tagttcacgc ccatttttcc aatgttgggc
    12301 tgttaccact tcgcctgttt cgatacgttt tgtccaaact aatttaggca cgatgccttc
    12361 tgctgataat gcagcaataa atggattgga attacgtttc agaaacaact tttgaccatc
    12421 ttgttcagcc atataagctt caccagacgc accaccagcc gagtcaagcg tccatcctaa
    12481 ctgataaaac tgctccacaa ctcgttcacc tcactttcaa atagaaaagg ctcaagaaat
    12541 tttttcaaga gccatattta aatcattttt tcaatgattt taaattcacg ttcatgtttt
    12601 gcactcattt aagattttat aattattgag cctttttttc aaccaaaaat gaaacacaaa
    12661 atgtgacttt ttacctttat ccgttttgaa agtttcacaa actcttcata atactatcaa
    12721 atcagcctac ttagtgtgaa tgtgaatgaa tatatctttc aaaaccttct tgtagacgtc
    12781 ttgtaatcgg ccccacttca ccgtcattaa ccacttcacc atcgatttta acgacaggca
    12841 tcacttcggc agacgtactt gaaatgatta cttcatcagc gtctttcaaa aatgctaatg
    12901 agaatgcttc atctttaaag gtaatttgct catcatcaca aatccattta atcacctgac
    12961 gtgtaatccc ttttaaaatt aaattgttcg ccggatgtgt gtatacaacg ccatctttaa
    13021 tcgcataaac attacttgaa gcaccctctg tcactgtacc atcacgatgt tgaatcgctt
    13081 cagtcgcatt gtattttgtc gcatattctt tcgccaatac gttacctaat aagtttaaac
    13141 ttttaatatc gcaacgtaac cagcgaatat catccgtagt aacgactgag acaccctctt
    13201 caagcgcttt aaacggacga tcgtatgatt ttacgaaagc tgttaataca ggttctactg
    13261 atggtgttgg aaaagcatgg tcacgtggtg cagcaccacg tgtcacttgc atatagaccc
    13321 caccatttgt cacattattc acttgtgcga gttcacgaac aagttcagtc aatgattcca
    13381 ctgtataatt taattctaaa ccgatttcac tcgcactgcg taataaacgt tcgaaatgtt
    13441 ctttagcagt aaataatttg ttgtcataaa tgcgaacgta ttcgtaaata ccgtctccaa
    13501 aattgtatcc acggtcatta aaagcgactt tagcctcgct ttcttctaca aaactttcat
    13561 taatcaatac ttttgtcata gattatccct ccacacaaac cgcataaatc gcttctaaat
    13621 agatgctcgt tgcgttaaat agttgttttt tcgtgatgta ttcatttttt tgatgcatta
    13681 aatcttctga gtcctcaaac atcgcaccga acgcgacacc tttatctaaa ttacgggcat
    13741 acgtccctcc gccaatcgta aatgatgggc gcatgtctcc tgtttggttg cgataagctg
    13801 tgagtaattt ttgcacaaat ggatcttcag ggttcacaaa atgaggtgtt tgtactttaa
    13861 gaccttcaat gtcaaagcct aatgcttgaa tctcggcagt aaagtcgctg atggcacggt
    13921 caaaatcaaa accttctgga taacgtaaat taatgccgaa cgaacctcct tcatctaagt
    13981 catagcgaat aacaccgata tttgttgtta aatcacccat cgaatctgaa tggaacttca
    14041 tacccatttt ttcaccaaag tgagaatcaa ataagtattt ttctccaaaa gctgtccatg
    14101 attgcgcaga ttgatttaaa ttcaacgtgt ttaagaaatg aattaaatat aaaccagcat
    14161 tcacaccaat agatggatcc atgccgtgta cagctttacc aaaaacagtt aatttcaaaa
    14221 tgccactatc aatttcgtgg tggccttcta attgatgttc tgataaaaat gcttcaaaac
    14281 gttgaatcgt atccgtcata ttttctttta ctaaaatatc tgcattggca acgtctggta
    14341 ccatgttgaa acgttcaccg gaagcgaact gcttcaattc gatttcaggt tcatcgtcat
    14401 ctaacgttaa agtttgctgt ttaatcgtaa atgtcgtaat ccctttttca ccgtgaatga
    14461 gtgggaattc tgcatcaggt gcaataccaa tcgtcggcat ttcttcagtt ttgaaataac
    14521 gttctgtaca tttccattca gactcttcgt ctgttccgat aataatatgt attctctttt
    14581 tccaatcgac attcatatca ttaagaattt ttactgcata ataagccgca atagtaggcc
    14641 ctttgtcatc aagtgttcca cgcgcaacaa tacggtcgtc cgtctcaaca gggtcaaatg
    14701 gatctgaatc ccaaccgtca ccggctggca caacatcaac atgacctaaa ataccaaaaa
    14761 gttcttcacc tttaccgatt tcgatacggc cagctaaatg atcggtatca aatgtattaa
    14821 atccatcgcg ctcagctaac tgatacatat attccagtgc tgccttagga cctggaccca
    14881 ctggcgcgtc ttccgtagct tctgtatcat tacggactga tttaatagct aaaagtcctt
    14941 ttaagtcttc gatcatttgc gtttcatatt cttgtacttt ttctctccac atgctgatca
    15001 acttcctttt tttcatgatt gtatttctta ttttacatga attattcatt aaacgacagt
    15061 aatatttctg cacacttttt taatttttct gataaaacat tgtccttcat tttaaaatgg
    15121 cgatgcactc gcggaaatac tgaaaatatt atcatgaaaa aacatcttac atagaactca
    15181 agtcatcata ggcaccatga gttctatggc aattcataac aatgctacaa atgtcctcaa
    15241 aactgtgaca gtaaaattaa aaaacagacg ctaagggcat cgacatgaca ccttaacgtc
    15301 tggttttaaa aatgttactt gttcggttcg ttatcacgca ccacatgtaa attgtgtgaa
    15361 gaatctccgc caccttcatc atcaaacaaa gcttctctgt catctaagtt atcctgttgt
    15421 tcgctattca ataactgttc ttttttctca ttaataaatg atttcggatc ttgttttgct
    15481 tcgttaatat aagcttttgg attctctttc actttattaa attcttgcgt tgcagcttca
    15541 ctcacttgtg ctgctttttc ttgtgcgcgc tttttgtagt cttccggatt ttctttatat
    15601 ttttgatatt cttgcttcaa gttttcgcgg ttttgtttat ttgaaagtac aactgctgcc
    15661 actgcacctc caataccaag aatcgcttta aacagttttc ctgattttgc catctttaat
    15721 cacctcaaat acttttaatg taaggttacc cgacagatat gcaagttaaa cctctttcaa
    15781 ttaaatattt gaccgattaa cgataattca gtaattttag ctcatcctct gttaaagatc
    15841 gataagcacc tggtgacagt gatgaatcta acgtgaggtc gccaatagac actcttttta
    15901 acccgacaac ctcattatca atcgcatgaa acattcgctt cacttgatgg tacttccctt
    15961 cttgaattgt aacgaatgcc gtcattgaat catccaaaat ttcaagatgt gcaggttgta
    16021 gccttccctc ttttaatgtg ataccttctt caaaacgttt tggatcattt gttttcaatg
    16081 catacttcgc tttaacccaa tacgttttcg atacatgctt atttggattc atcaacgcat
    16141 ggttaaattg accatcattc gtaattaaca aaagcccttc tgtatcttta tcaagccgac
    16201 ctactggaaa taagtctaaa tgtcggtagc cttcaattat gtcaatcact gtttgatgtt
    16261 gatcatctac cgttgcagaa atgacgtttt gaggtttatt catcatcaaa tacacaaacg
    16321 gttcgtaagc aatcacacgc cccttcactt cgaccacatc atgctctgga tcaatttgtg
    16381 ttttagagga cttgattttc gcgccattat gcaatacatg cccttttttc aacagtgctt
    16441 taacttctgt acgtgtacca acacccattt gcgctaaaaa tttatcaata cgcattataa
    16501 aaagctcact ttacgtctaa ttttgtttgg aatctcacct aaaaacttgt ctgccaagcg
    16561 tgttctcatc gttaatactg cataaataat aacaccgacg atagcacaaa tgactgtaat
    16621 aataaatgcg ccgacatgac ttgctggtga aatcacgaat tgcaagccaa aataaatgat
    16681 ttcaacaata atcatcatca taaagctata taataaaatt ttacatacat cgataatcgt
    16741 ttcattaaat ttgaaacgcg cgtatttttt aagaatgaaa aagttacata caatcgcaaa
    16801 agttaatgca atcgctgtac ttaaaatcgc accagctgtt tcaaacataa taattaaagg
    16861 catgtttaaa atgaatttca acacgactga accaacaatg acgaacaccg ttaatttttg
    16921 cttatcaatc ccttgtagca tcgatgccgt cacactcaat agtgaaatca aaatcgcgac
    16981 aggtgcatag tagaacaata gacgactgcc atccatactg tattcataaa acaccgtata
    17041 aagtggcaca gctaaggcca taatccctaa acttgccggc acggtaatgt acatcaaaac
    17101 acctaatgac gtacgaattt gacgatgcat ttcaacataa tcgccttttt catatgtttt
    17161 agtaataaat ggaattaaac taatcgcaaa tccagcagct aaagacgttg gaatcataac
    17221 aattttattc gttgtcatat tgagcatcgt aaaaaatgta ccttgtaaac tcgtttccac
    17281 gcctgcaatg gataatgcat tattgtgcgt caattggtcc acaatcataa acaatgggaa
    17341 gttaagactt acaatgacga atggaatact gtatgagaga atttctttgt acatttttga
    17401 atatgacaca tcaatccccg tcatatccga agccaccatt tcatgtatac cgcgacgccg
    17461 cttaatccaa taccaccaaa gtgttaaaat acctgcaatc gcaccaatcg cagcaccgaa
    17521 cgtcgcgata ccatttgcta ataatacaga gccatcaaag acatttaata cgagatagct
    17581 accgactaaa atgaaaatga tacgtgcaat ttgttctgta acttcggata atgctgtcgg
    17641 tcccatcgat ttgtaacctt ggaagacccc tcgccaagtg gctaacactg gaataaaaat
    17701 aacgacaaag ctaatcgtac gaataatagc agtaatttga tcgactgtcc aacccgcatt
    17761 tttatccata ttatgcgcaa tagtgacaga cgcaatcatt ggagacaaga gatataaaat
    17821 gacaaagcct aatatacctg taatactcat cacgataaag ctggatttgt acagtttttg
    17881 actgacacga tatgcaccta atgtattgta tttcgcaacg tatttcgacg ccgcaagagg
    17941 tacacctgca gtggcaacag ctatcgcaac attgtaaggt ccataagcat agttaaaagg
    18001 tgcaagatta tctgcaccgc ctatgatttg gtaaaacggg ataacgtaaa taatgcctaa
    18061 aacttttgta attaaaatac ttaaagttag taaaaatgtt ccccttacta attccttgtt
    18121 ttcactcata gataacctac ctactctaca ttttttcaag atttaattat aacacaatac
    18181 ggatattata cactgattga gaatatgtta aaatcaaaat atcaatttta aggggttttt
    18241 ataaaatgta tcaaacaatt gtgatcggtg gcgggccgag cggattaatg gctgccattt
    18301 catcaagtca aaacgggcaa cccgtactcc tgttagaaaa aaagaaaggt ttaggacgaa
    18361 aattaaaaat atccggcggg ggtcgttgca atgtgacgaa caacttgccc tatgctgaaa
    18421 ttattcaaca cattcctgga aatggaaaat tcttatacag tcctttttca attttcgata
    18481 accaatctat tatcgaattt tttgaatcgc gtggtgttgc attaaaagag gaagaccatg
    18541 gtcgtatgtt ccctgtatca aatcagtcac aagatgtact cgatgcattg attcgtgaat
    18601 tgaaacaaaa taaggttaca gtcaaagaag aacaaactgt agtggacgtg aaaaaagtgg
    18661 attcagacca tttccaagtc caacttcaag atggtgatac gtataaagca aaaacagtca
    18721 ttattgcgac tggtggcaca agtgtacccc aaactgggtc aacaggcgat ggctatcgct
    18781 ttgcacaatc actaggtcat cacattacag aacttttccc tacagaagtt ccgattaaat
    18841 caaacgcacc atttattaaa aaccaatcac ttaaagggtt gagtctaaaa aacgtcggtc
    18901 tatctgtctt aaagaaaaat ggcaaaaaac gcattactca tcaaatggac atgctcttta
    18961 cacatttcgg tattagtggc cctgccgcac tgagatgtag tcagtttatt tatcacgagc
    19021 aaaaaagtca gaagcaacaa aacattcaaa tgcaaattga tgcctttcct gaaatcaatg
    19081 aagaagcact taaacaaaaa atcacgaagc agctcaaatc acaacccgat aagcatatta
    19141 aaaatgcact caaagggttg attgaagaac gctacttaac actgatcatt gatagcgccg
    19201 gtattccgtt tgaaacgaca taccatcata tcagcgcgca acaacttagc acactcgcac
    19261 atcaattcaa agcatttact ttcgaagtct acggcacatt accgttagaa aaagctttcg
    19321 taaccggcgg cggcgtttcc atcaaagaaa tcgtacccac gactatggaa tctaaaatca
    19381 cacctggcct atatttatgc ggtgaagtat tggatattca tggatatacg ggcggttaca
    19441 acattacgag cgcccttgtt acgggttacg tcgcaggtta cttcgctggc tttgtagaat
    19501 aaaaattaac cctgccacac aacattcccc catctcaaat tgataacgag ctgggggttt
    19561 tgattgctgt atccattcaa atgttaacat cattaatctc cgcatttggc cgtctcaacg
    19621 cttacaaaga gctatgttaa ggtgagtggt ggcttttgat agtttgtgtt gttgtttgtc
    19681 ccccccctac atattgcaag accgtgcaag actcctgaga ggaaagttga aagcaaaatc
    19741 aaatcattga attatgagag tggctacttt ttaacgcagt agctatctga cttctcaatg
    19801 cttttgccgg tgagaagtcg agtcagcctt gcgggggcag tacgacgaaa tctttgttgt
    19861 acatgagatt tctgtactgc tcccaaaatc caattcggcc tccatcaagt gtatgcttta
    19921 atccagccga atttagttga aggatcagcc cctaggaaag ggaaggcaag tgctgcaatc
    19981 aagaaatatt aaactaaact tttcgaaatg ttcaacaacc tacaaacaca ctcaaatgta
    20041 atcgaaatgt tcaccaaaca acaacacaaa aacactgcta ttatcgcatg gtctcccaca
    20101 caacaataac agtgcatcat catattctaa atacgcttaa actctaatcc ttcttcaccc
    20161 caagcacgca taccaccttc aacattcacc gcatcaatcc cgtgatcatt caaaaacgca
    20221 accactttcg cacttctcac accgccagca caaacaatgt agtacgtcgt atcctttttg
    20281 aaatcatcca catgatccgg aatgtcattc atcggaatat gttcagcatt aggaatcatt
    20341 cccattgcca cttcttcatc ttcgcgtaca tcgacaatat ttactggttc tgaacttaaa
    20401 acaatctctt ttaattcatc tgtagtaatt tctttcatta tcctctacgc tccctcattc
    20461 ttctttattt cgcgacaata ttcaccaatt tttgtggaac tgcaataact ttcttaacat
    20521 ctttgccctc aactgcagct ttaatgttgt cattggctaa cgctgtcgct tccatatctg
    20581 ctttactcat atctttagga atttcgattt tagcacgaac tttaccattc acttgaacga
    20641 caatttcaac cacatcttct tctaatagcg atggatcgaa acttggccat ggttggtaag
    20701 taatcgttgt atcatgtcct aaaatagacc ataattcctc accgacatgc ggtgcaatag
    20761 gggctagcat tttcacaaaa ccttctgcat aagctttaga aatgttgtca gccttataac
    20821 attcattaat aaagaccatc aattgactaa ttgccgtatt aaaacttaat gattcgaagt
    20881 cttcagtgac ctttttaact gtttgatggt aaaccgtttg taatgctggt gtgtcacctt
    20941 caatcacttt atccgtgagt tgactgtctt cagtgacaaa taagcgccat acacgatcta
    21001 agaagcgacg tgaaccatct aaaccatttt cactccacgc aattgaagct tctaatggcc
    21061 ccataaacat ttcatataaa cgtaaagtgt ctgcaccatg tgaacgaacg atatcgtctg
    21121 gattcaccac attacctttt gatttgctca ttttttcgtt accttcacct aaaatcatac
    21181 cttggttgaa taatttttgg aaaggctcag acgtaggaac aatgccaaga tcataaagca
    21241 ctttatgcca aaagcgtgca tataataagt gtaatacagc atgttcaacg ccaccgatat
    21301 aaaggtcaac aggcaaccaa tgtttaagct tttcagggtc ggctaacatt tgatcatttt
    21361 tagggtcgat atagcgtaag taataccaac agctacccgc ccattgtggc attgtgtttg
    21421 tttcacgacg ccctttcata ccggtttcag gatcaacgac attcacaaaa tcatcaatat
    21481 tcgcaagtgg tgattcacct gtacctgaag gcttgatttc atccgtttta ggtagtaata
    21541 aaggtaattc gttttccggt accgttgtca ttgagccatc ttcccaatga ataatcggaa
    21601 tcggctcacc ccagtatcgt tgacgactaa ataaccagtc acggagttta taattcactt
    21661 tcttttctcc aaggcctttt gcttctaata gttcaatcgc ttttgcaatc gccgcctcat
    21721 tgttcagacc gtctaattca ccagactgaa cgtgtgcacc gtcaccagtg taataaggtg
    21781 tctctgcatc gttttcaata actgtcacaa ctggtaaatc aaatgttgtc gcaaattcgt
    21841 agtctctttc atcatgtgct ggaacagcca tcacagcccc tgtcccatat gaggctaaca
    21901 cataatcagc aatccaaata ggcacttgct ttcctgtaaa cggatgaatc gcataagccc
    21961 ctgtgaagac acctgttttt tcttttgcaa gatctgtacg ttctaagtca gattttttcg
    22021 ccgcttcatc ttgataatgt ttcacttttt catattgttg tggtgtcgta atacgattca
    22081 ctatagtatg ttcaggactt aacactaaaa atgttgcacc gtaaatcgta tctggacgtg
    22141 ttgtaaatac ttcaatcggt gtgttgatat tttcgacttt aaagttcact ttcgcccctt
    22201 cagaacgacc aatccagtta cgttgcatat ctttaatcga ttcaggccaa tcaagtgtat
    22261 ctaagtcttc aagtaaacga tccgcatatt ctgtgatttt caatacccat tgtttcatcg
    22321 ggcgtcgcac cactgggtag cccccacgtt ctgatacacc atcgaccact tcttcattag
    22381 atagtactgt gcctaacgct tcacaccagt ttaccggaat ttcatcaata tacgctaatc
    22441 cctttttata aagttgaata aaaatccatt gtgtccattt ataatattca gggtctgtcg
    22501 tactgacttc acgatcccag tcataactaa aaccaagctc ttgaatttga cgcttaaatg
    22561 tttgaatgtt acgttttgta aattcggctg ggtcgtttcc agtatcaagt gcatactgtt
    22621 cagcaggtaa accaaacgcg tcccacccca ttggatgtaa tacattgtaa ccttgcatac
    22681 gcttataacg tgacaatatg tcagttgctg tatagccttc tggatgcccc acatgtagcc
    22741 ctgcacctga tggataaggg aacatatcta atgcataaaa tttcttctgc ccgatattat
    22801 cttctgtttt aaacgttttg ttctctagcc aatacgtttg ccactttttt tcgacttctt
    22861 gatgattgta actcacaatt aaatcctcct cattcataaa aagacacctc aaactattca
    22921 tatatgctaa gggacgactt ttgccgcggt accaccctca ttcactccta gaagtgcact
    22981 tcattttaaa tagtaagaga tgtcatttat ttttcattat ttattggcaa gttcacttaa
    23041 agtttttcgt tagttcgcac caccactaac tctctgtgga aaccctttta agttactact
    23101 ccagtccagt acgaccacat gcttaattcg taatcatcta ctatattatg caatttggta
    23161 cgaagatgca agtgtcattt actgtgatta acgatataac gttttcggat caacttttct
    23221 atcataaatc gtaaggaatg ccatagcgat gacgagtaaa cctatcattg ataaaaacat
    23281 gatttgcata ttgaacacat cgacgagtat cccgccaact aatgtaccga aagctttccc
    23341 cactgttgaa gcagaattca caatgccttg atagacccct tctctacctt taggcgctaa
    23401 attattagca atcgttggta cagcaggcca aacgaacatt tctgcaaatg tcataatgac
    23461 catccctaca acaaaaattg aaaatgatgt cgcaaaactt gtcacgaaaa acgacaatat
    23521 aaatacgact aatccaaagt aaagttgctt tttcagctgc cctttaatga ggtgaataat
    23581 cggtaatatt aaaggttgtc ctactaaaat gagcaccccg ttcactgtcc ataacaaact
    23641 atattgactc atagaaatac caatactttg tgtaaatgac gcaatagttg tttgccattg
    23701 aacatatgca atccaacata gcgcaaacat cacacataat aaaatgagtg ctgtgaaatg
    23761 tttcttgttt tgaatgtgcg ccacattttc caacgtttct tgatgtttaa ccgtcgcttg
    23821 atagtccata ttaaattgaa ataatgcgat aaagaagaaa atgacataca tcgccaaatt
    23881 cgccataaaa atataattaa agcttagttc agcaacaaaa ccacctagcg ctgcacctaa
    23941 tgccacaccg atattttgtg ctaagtaaat cgcattaaac gtttgtcttc ccccttgagg
    24001 ccacactgct ccagccatcg cataaatagc agggataatc atcccaccgc caaaaccgag
    24061 cataatgagc caaatcgcat accaaggcca accgtggaag aaatttaata aaatggtagc
    24121 gcacaaactc acaatcgtgc ctaacataat tgtccgatat cctccaagtt tatcgaacaa
    24181 tgtcccacca agtaaatttc ctacaatcat tccaaatgaa ttgaccatca gtacgagccc
    24241 agcagtactt aatgatttgt cgagttcctc attcatatag atcgtattca acggccataa
    24301 aaaactcgca cctgtgatat taatcgccat cccaatgacg agccaccata tttctttagg
    24361 catattcact gatgtttcac tcctttttgt ctctagcaca cactataaca cgttataatg
    24421 aaaatatgtt aaaatcttca aatactgttt aagaaaaatg acgaatacga tatgataaaa
    24481 acagtttaaa catagaaagt cgaaaggaag attgtgatgg gcacttattt cccatatgct
    24541 tttgagaaga aacgatatca tactttaaat tatcatctaa aaaataaatt tggacaaaaa
    24601 atatttaaag ttgctttaga tggtggtttt gattgcccta atagagacgg tacagttgcg
    24661 cacggcggtt gtactttttg ttcagcagca gggagtggtg actttgcggg taaccgtgct
    24721 gatgctatcg aagtacaatt taaagagatt aaaaataaaa tgcacgagaa atggcacgaa
    24781 ggtcaataca ttgcatattt ccaagccttt accaatacac atgcgcccgt tgctgtattg
    24841 cgagaaaaat ttgaagctgc attaaaagaa ccgggtgttg tcggattatc tatcgggaca
    24901 cgtccagatt gtttaccaga tgacgtcgtg gactacctcg ccgaattaaa tgaacgtaca
    24961 tatttatggg tagagttagg tttacagacc attcatcaag aaacatcgga cttaatcaac
    25021 cgtgcacatg atatggattg ttattacgaa ggcgtcgcaa aattacgccg tcacaacatt
    25081 aaagtatgtt cacacattat taatggcttg cctggtgaag attatgacat gatgatagag
    25141 actgcaaaag cggttgctca aatggatgtc caaggaatta aaattcattt gttacatcta
    25201 ttaaaaggta cacctatgat gaaacaatat gataaaggtt tacttgaatt tatgacgaaa
    25261 gaacagtaca ttcaactcgt ctgtgatcaa ctcgaacaat tgccaccaga aatgatcgtc
    25321 caccgtatta caggtgatgg tcctattgat ttaatggtcg gtcccatgtg gagtgtcaat
    25381 aaatgggaag tattaaacga gattgacgca gaacttgaac gtcgtggaac tgttcaaggc
    25441 gcatcttata gttctcaggt gcacatatga tagtcgaacg tattttacct tttgccaaat
    25501 cattaattcg aagccatact acatcagaaa gtgtcgtcat tgatgcaaca tgtggtaacg
    25561 gtcatgatac aaaattttta gcagacctcg tccctcatgg tcatgtttat ggctgtgaca
    25621 tccaacaaga agccattgaa aatacaaaac aacgtgttca cgattacaac aatgtttctc
    25681 tttttcatac agggcacgaa tggattacac aatatattag agacgaacat ctcactcaag
    25741 tacatgctgc catttttaat ttaggttatt taccgaaagg cgacaaatct atcgtcacac
    25801 aatcaacgac tacacttgct gctgttcaga cgatttttga tatattacaa ccagaaggca
    25861 tcatcgtttt agtcgtttat cctggtcatg aagaaggcaa ggaagaaagc atgactttga
    25921 tgaagcattt ggcagcgttt gatcaacaac gtgctcatgt tttgaagtat gagtttatta
    25981 atcaacaaaa tcgaccacca tatgtgattg cgattgaaaa aagagcgtag tgtcaaatga
    26041 ggttaaagcg ttgtaaaaga tgtgtagatt tttaagtttg tttcagtttt gtagatttta
    26101 aattggaaaa cgatacccca atccttttga tttagcactc aatatttagc tatctggtca
    26161 tgcgtttcaa aaggtgggcg tatcgttttc attcttatat cctacttcaa gtaaatttaa
    26221 aaattcattg ctatattact tctttcaaaa tactaagaga gatgtgaatg ctgtgaatta
    26281 aagcttttgt attgatttca aatttacgtt catcgctcac tacgagaaaa accaacgaca
    26341 atcctcatta gggaagcgtt ggttttataa taggtagtat gaataattca ttttcatttg
    26401 cactctcttt ttaattcaat gtcgtctttg gtgatgccaa gaattgcggg cttttgtagc
    26461 tcttcaattc tttttagctt tttcagaatg ggtggattaa atcttgatat caaatgagag
    26521 tcgcattggt ctttaaatat cacagccgtt gacaatgtca tttaataatg ttctcaaatg
    26581 tgcatctctt ttttcgattt ccatacatgt aaaattaatt aaatcttgct tgtccgcttc
    26641 tttatcctca ttaaaatgaa taataacggt tctttcatcg tttgtcggac gctctttaac
    26701 aatccatttc atttctacca aattgttgta cgttcttgta cgcttataag tcttaacttt
    26761 cacgtagtca tccatttctt ttaacgtcat agaaccttga tcccaaagtg tcagtaaaat
    26821 caaaaactct tctttcgata aacgatattt tccctcaatt tcttcaaaaa tggcttcaac
    26881 ttctttttgc agttggtcca ggcgcatgat atcgctcact ttataattat ttttttcagt
    26941 cataa
//
LOCUS       DANHPA010000023        26829 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.023, whole genome shotgun sequence.
ACCESSION   DANHPA010000023 DANHPA010000000
VERSION     DANHPA010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 26829)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26829)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26829
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.023"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            281..967
                     /locus_tag="PTC28_000783"
     CDS             281..967
                     /locus_tag="PTC28_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjG family noncanonical pyrimidine
                     nucleotidase"
                     /protein_id="HDK5716097.1"
                     /translation="MSYKVILFDFDDTLVDFHDAEVQAYAHLMRHYAVPSQLHDYHRF
                     KEINQNHWEAFQRGEITKAEVLRHRFIETFATYGMTVDGQEADVVFRDGLARAPIKWL
                     TGIIPMLKTLQSNYALAIVTNGVTDTQERRIARTDLHSMMDHIFISDKIGAQKPNVAF
                     FEEVFKVFHQYDKKDFLIVGDSLTSDIQGGINSGIDTCWFNHRQLENKTSIQPTYTIN
                     HIEALKEILK"
     gene            complement(1157..1606)
                     /locus_tag="PTC28_000784"
     CDS             complement(1157..1606)
                     /locus_tag="PTC28_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDK5716098.1"
                     /translation="MTKVEHLDINYKTEELFEDFRQNFGNKDLYMVNELHGEMIDASS
                     ESPFYGIYVGEKIGARMALYRKGEVEETFFPNFDDYLVVWKLEVLKKYQGKGYGSALV
                     AYAKSFDLPIKAIARNESKDFFIKNGFKDLEVKNDDGHDILVWEPQK"
     gene            1738..3351
                     /gene="bshC"
                     /locus_tag="PTC28_000785"
     CDS             1738..3351
                     /gene="bshC"
                     /locus_tag="PTC28_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis cysteine-adding enzyme
                     BshC"
                     /protein_id="HDK5716099.1"
                     /translation="MDCLNITVNESDQFINRLKQQDENILQFFDYDPVEEESYARRMQ
                     QPNNGREHEMAKVVRAYMADLNLSEAQQRALDALENGAKVVVGGQQAGLFTGPLYTFH
                     KIISIIVKANELESTYETPVVPVFWIAGEDHDFDEVNHTYVMQQRTGTLKKVKYHTMA
                     PPESNVSRYAPDKAALKQALTDYFAALPETPHSKVLYQQIAHFIDQADNWTSLFKQIV
                     HECFSQSGLLLIDAQFEALREIEVPLFKQIIQHHEQIDNAFRMQQQRTGAAGLTPMIQ
                     TDTNVHLFMHEDGQRQLLKYEDGVYRLSKSDVTFSQAALLQKIEATPTDFSNNVVTRP
                     LTEEWLFNTVAFIGGPSEIKYWAELQTVFHEMGIEMPIVLPRLRFTYVTPKIEKLLAS
                     YDLDLADMIANGTEAARQRFVRAQASEEVLVDMQQMLDQQHAFYERLQAQLNDSEDQR
                     KLLKKNHQIQTHQYEYLQSRYLKNIERENEISMRHFHLLSQTLYPMGGLQERIWNPLQ
                     LLNEFGMEMYTSSTFPPLRYSFDQYVIKT"
     gene            3498..3929
                     /gene="mraZ"
                     /locus_tag="PTC28_000786"
     CDS             3498..3929
                     /gene="mraZ"
                     /locus_tag="PTC28_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HDK5716100.1"
                     /translation="MFMGEYENKLDAKGRMIVPSKFRYDLNERFILTRGLDKCLFGYT
                     LEEWQTIEEKMKSLPLTKRDARKFVRMFFSGAIEVEIDKQGRINIPAKLREYAHLDKE
                     CTVIGVSNRIEIWDRNTWNDFYDESEESFEEIAEDLIDFDF"
     gene            3947..4882
                     /gene="rsmH"
                     /locus_tag="PTC28_000787"
     CDS             3947..4882
                     /gene="rsmH"
                     /locus_tag="PTC28_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017724209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HDK5716101.1"
                     /translation="MFHHISVLLKETVDQLNIKEDGVYVDCTLGGAGHSQYLLNQLSD
                     EGRLIAIDQDMTAINHAKEKLQQDLHKVTFVHNNFRNLANILAELNIDKVDGILYDLG
                     VSSPQLDVPERGFSYQHNAKLDMRMDQTQPLSAYEVVNTWSYETLVKIFFRYGEEKFS
                     KQIARKIEARRQQQPIETTFDLVACIKEGIPAKARRKGGHPAKRVFQAIRIAVNDELA
                     AFEDSLEQAIDHVKVNGRISVITFHSLEDRLCKQMFQEYEKGPDVPRGLPVLPEAYTP
                     KLKRVNRKPIVADATDLEDNHRARSAKLRVAEILK"
     gene            4901..5287
                     /gene="ftsL"
                     /locus_tag="PTC28_000788"
     CDS             4901..5287
                     /gene="ftsL"
                     /locus_tag="PTC28_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002446224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HDK5716102.1"
                     /translation="MAVERIYDTYQPQVEPQRKQSTQKQTIKKQVVVKLTRFEKMLYI
                     TLVTIIAVISIYMLSLKMDAYDTRGKIADLDQKIEKQTSQNSALKSETMENSSYKRIY
                     KKAEDQGMSLKNDNVKVVRKDGETKN"
     gene            5268..7421
                     /locus_tag="PTC28_000789"
     CDS             5268..7421
                     /locus_tag="PTC28_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HDK5716103.1"
                     /translation="MAKRKIKIKKNKLGAVLLMGVFGLLFFLLVLRYGYVMLTGHSSG
                     EDLIAKANEKYLSHLDEDAERGKIYDRNGKVLAEDVDRFRLAAVIDPQASKDSDKPRH
                     VVDKKKTAKVLAKIIDMPEKDIEKRLNTKKAFQVEFGRSGQNLTYQDKEKIEKANLPG
                     ITLYPEVKRFYPNGKFASHLIGMAQKDPDSGKLKGALGVEKIFDSYLKGKAGHTSFTK
                     DIWGYIIPNSKNEVAPQRGDDVHLTIDSNIQVFVEEALDKMVEHYEPKDIFAVVMDAK
                     TGEILAYSQRPTFNPDTGEDFGKKWANDLYQNTYEPGSTFKSFGLAAAIQEGEFKPDR
                     KYQSGYRDIQGSRIYDWNKKGWGEIDMSPGFTYSSNTLMMRLQDLVGADKMKSWYEKF
                     GFGKSTRSLFDGEQSGNIAWENELMQKTSAFGQSTTVTPAQMLQAQSAFFNKGEMLRP
                     YFVQSIVNPVTKNTYYKGEREVTGKPIKNDTAKKVNKQLDEVVNSEDSHAKNYRVDGY
                     RIGGKTGTAQVADPENGGYVKGPNPYFVSFMGHATSKNPRVVVYAGMSLAQKNDQEAY
                     EMGVSKAFNPIMKNTLQYLNVGDNEVDDSKTKISNVPDVENRSVQRAEDEIRGKKLNP
                     IVIGNGKKVVSQSPSSNGRLLPNSNVLLLTEGDLTMPDMTGWTRDDIVAFQSLTDIKI
                     DVKGSGFVKSQSKTPQSAIDKNTKLEVTLDSQKTE"
     gene            7621..8586
                     /locus_tag="PTC28_000790"
     CDS             7621..8586
                     /locus_tag="PTC28_000790"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HDK5716104.1"
                     /translation="MGLISAIIAFVITAVLVPILIPTLKRMKFGQSIREEGPQSHMKK
                     TGTPTMGGLTFLIGAIVTTIIASIFVEPASPLLLLLFVTIGFGLIGFIDDYIIVVKKN
                     NQGLTSKQKFLAQIAIAVIFFIVAKGFNAFNFSTDIHIPFTDVSIPLSFAYVIFIVFW
                     QVGFSNAVNLTDGLDGLATGLSIIGFTMYAIMSFALEQPAIGVFCIIMVAALAGFLPY
                     NINPAKVFMGDTGSLALGGIFATISIMLNQEISLLFIGLVFVLETLSVMIQVTSFKLT
                     GKRVFKMSPLHHHFELVGWSEWKVVTVFWSVGLITGLIGLWMGVN"
     gene            8587..9936
                     /locus_tag="PTC28_000791"
     CDS             8587..9936
                     /locus_tag="PTC28_000791"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HDK5716105.1"
                     /translation="MIHYTGLRGKKVLVIGMAKSGYEAAKLLHRLGAEVTVNDGNDLS
                     NDAHAKYLEDLGISVVSGAHPLALLDEAPIIFKNPGIPYTVPIIQEAQKQGLKILTEV
                     ELSYLISEAPIIGITGTNGKTTVTSLIGDMFNKSRENGRLSGNIGFVASKVAQEVKTD
                     EYLVTELSSFQLLGIEHYRPHIAIITNLYSAHLDYHENLENYQNAKKRIFENQTESDY
                     LIFNDKQRHLIDTSKIRAKILYFSTQHRVDGIYVEKEYIVYNGVRLIHLDDIVLPGEH
                     NLENILAAVMAAILAGVSISAIVQSLSTFSGIAHRLQYIGNNKTNKYYNDSKATNTLA
                     TQFALSSFKQPVIWLCGGLDRGNDFDELIPYMNNVRVMVTFGETQDKFVKLGESQGKY
                     VIRAKDVTDAVAKVQDVIEPNDVVLLSPACASWDQYDTFEQRGERFIEAFRAHLPSH"
     gene            9952..10842
                     /locus_tag="PTC28_000792"
     CDS             9952..10842
                     /locus_tag="PTC28_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HDK5716106.1"
                     /translation="MTKEISKINNEYLKEKRKKQRIQQRRVQRMIVGILVVIVLLILV
                     YMFTPISHIKSADIKGNHYVSKQDILKELDIQNHPRIYAYSSDDAETRLKQNELIDEV
                     TIEKGLFNPIEVNVKEHTIIAITTEKSRVVPMIENGKVLKDYKQEVPNEAPYIEGFKG
                     AEKRNLIDALQKMDRTTRAQISEIVSAPQKDQPHLIKLFMRDGIEVVGNTNTIAEKLK
                     YYPSMSQALEKDETGKLKKSGFIDLSVGATFIPYDNVNNGQTNSASAKEVQSGTASED
                     KAKDDLQKALNKIKDEESSE"
     gene            11058..12458
                     /gene="ftsA"
                     /locus_tag="PTC28_000793"
     CDS             11058..12458
                     /gene="ftsA"
                     /locus_tag="PTC28_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HDK5716107.1"
                     /translation="MEEHYYVSVDIGSSSVKAIVGEKFHNGINVIGTGQTYTNGIKNG
                     LIDDFDLAKQAIKDTIKKASIASSVDIKEVFLKLPIISTEVFDETNKIEFHQDTEING
                     THIEEVLEGIREKNTEPETEVIDTFPIRFIVDDNNEVSDPKELVARHSLQVDAGVIAI
                     NQSILINMIKCVEACGVDVLDVYSDALNYRSALTATERELGACVIDIGEDLTQIAFYE
                     RGELVDADVVFMAGRHITEDIAQFLNTTYDTAEKIKQQYGHAFYDSASDQDVFTVNQL
                     DSDEPAQFTQKELSDVIEARVEDILIKVFDVLQELGLTKVNGGFVVTGGSANLLGVKE
                     LLLDMVNEKVRIHTPSQMGVRKPEFSSAISTISSSIAFDELLDYVTISNHDNEEIEEE
                     IIESDSKRQEHKSSGFESFFKKKPKKQQSQDTANSEFVDDDTSEEVYEDIDGHEHGEP
                     KQEESKFKKIMKSLFD"
     gene            12488..13660
                     /gene="ftsZ"
                     /locus_tag="PTC28_000794"
     CDS             12488..13660
                     /gene="ftsZ"
                     /locus_tag="PTC28_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HDK5716108.1"
                     /translation="MLEFEQGFNHLATLKVIGVGGGGNNAVNRMIDHGMNNVEFIAIN
                     TDGQALNLSKAESKIQIGEKLTRGLGAGANPEIGKKAAEESREQIEDAIQGADMVFVT
                     AGMGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAAVDT
                     LIVIPNDRLLDIVDKSTPMMEAFKEADNVLRQGVQGISDLIAVSGEVNLDFADVKTIM
                     SNQGSALMGIGVSSGENRAVEAAKKAISSPLLETSIVGAQGVLMNITGGESLSLFEAQ
                     EAADIVQDAADEDVNMIFGTVINPELQDEIVVTVIATGFEDKPSSQARKQGHSGFGAS
                     ATPTSSKESSFGGGHTGQTSTQDKEVESGRSHTTADDDIPSFIRNREERRSRRTRR"
     gene            13814..14626
                     /gene="pgeF"
                     /locus_tag="PTC28_000795"
     CDS             13814..14626
                     /gene="pgeF"
                     /locus_tag="PTC28_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HDK5716109.1"
                     /translation="MELFTKKGHHLSYQPSLVQGVQIGITTRGDGVSAYPNAAFNMAR
                     YIDDKPENITHHQEVLAQEIGIPRAQWVFPIQTHEANVVEVTQADRGKNIDALSKDTL
                     HGFDAMFTYDEDTMLTMCYADCVPIYFYSPSHHFIALAHAGWRGTVATIVHRVLDQFP
                     YDYNDLYVVIGPATSDSYEINDDIFKQFQQLPIDSAAYIETRDEDRHGIDLKYANQLL
                     LEQYGVPRDHIYRTEYATSEDLDLFFSYRLEKGKTGRMLAFISQSLNESGDD"
     gene            14627..15301
                     /locus_tag="PTC28_000796"
     CDS             14627..15301
                     /locus_tag="PTC28_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HDK5716110.1"
                     /translation="MSVKTNLAEIEHTITENVTFREDPTRPHVIAVTKYVTINRAKEA
                     YEAGIRHFGENRIEGFLEKKAALPDDVHMHFIGSLQSRKVKEVINDIDYLHALDRQSL
                     AKEISKRAEHEIKCFVQVNVSGEASKHGIALEEVIPFIEKLVDYDHIRVVGLMTMAPY
                     TDNEAELEDIFEKLKNKRDEVQSLNLTYAPCTELSMGMSNDYHIATKKGATFVRIGTR
                     LVGKEE"
     gene            15307..15867
                     /locus_tag="PTC28_000797"
     CDS             15307..15867
                     /locus_tag="PTC28_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002446233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein SepF"
                     /protein_id="HDK5716111.1"
                     /translation="MAIKDLFNNFFTIEEEEDEDFIQEEERRREREQQQVQQQANKQQ
                     SERPRAVQSVPKRQASRSKSSQNDKQLQVAQKQEQGNVVNMSPTQDTYQNGSSKMCLF
                     EPRVFSDTQDIADELKNRRATLVNLQRIDQVSAKRIIDFLSGTVYAIGGDIQRVGADI
                     FLCTPDNVEVAGSITDHIESMENHYK"
     gene            15879..16172
                     /locus_tag="PTC28_000798"
     CDS             15879..16172
                     /locus_tag="PTC28_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HDK5716112.1"
                     /translation="MNIELLTSILEFLLFIVKAYTFGMIIYIFMSWLPGARESAVGRW
                     MSKIYEPFLEPFRRIIPPLGLVDISPIVAFLVLNLFERGLVAIFNLILHQIYS"
     gene            complement(16404..16808)
                     /gene="rbsD"
                     /locus_tag="PTC28_000799"
     CDS             complement(16404..16808)
                     /gene="rbsD"
                     /locus_tag="PTC28_000799"
                     /EC_number="5.4.99.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribose pyranase"
                     /protein_id="HDK5716113.1"
                     /translation="MKKAALLNSHVSQVIATMGHFDLLTVNDAGMPIPNDDRRIDLAV
                     TKALPLFIDVLAAVLEELKIQKIYLAEEIKTHNPTQLKQIKALIDQDVEIAFIPHSEM
                     KSYLSHPLNKGNIRTGEITPFSNIILESDVTF"
     gene            complement(16827..17708)
                     /locus_tag="PTC28_000800"
     CDS             complement(16827..17708)
                     /locus_tag="PTC28_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GRP family sugar transporter"
                     /protein_id="HDK5716114.1"
                     /translation="MNMVALLIGLGPLIGWGLFPTIASKFGGKPVNQIIGATVGTLIF
                     AIAFFIFSGRQFPTGLDLFFALLSGAGWCFGQIMTFKAFEYIGSSRAMPITTAFQLLG
                     ASLWGVFALGNWPGVTNKLIGFAALIVILIGAWMTVWSEDAQETKSSNLRKAVLILLI
                     GEIGYWLYSAAPQATDIGGKVAFLPQAIGMVLSAIIYGLMTMKKDNPFNKKVTWLQII
                     SGFFFAFAALTYLISAQPDMNGLATGFILSQTSVVLATLTGIYFLNQRKTSKEMFITI
                     IGLILILAAATVTVFIK"
     gene            18065..18892
                     /locus_tag="PTC28_000801"
     CDS             18065..18892
                     /locus_tag="PTC28_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDK5716115.1"
                     /translation="MRFYKVLVPMIESNLENMTTTEKEVAQFFLKQVTVEDLSSEMFS
                     NQLHVSKATLTRFAKKCGFTGFREFLFHYREMMREKEDILAYKDLIQKVLFDYEEMLR
                     KNYSILNESQLEHIKEMINQAERVYLYGKGSSALALKEMKMRFMRLGIICEVIEDNDM
                     LVWNNLLVDASCLVIGASISGKTSSVLHALKRAKAQGAQTVLMTTRNFNAHEFGCDEI
                     LLLAAAKHLSYGNVISPQFPILLMTDCLFSYYLEDPQRGKYYDQTIIDKEAQSHHHD"
     gene            18989..19912
                     /locus_tag="PTC28_000802"
     CDS             18989..19912
                     /locus_tag="PTC28_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HDK5716116.1"
                     /translation="MRDLNRYQGIIPAFYACYDENGEVSQERVRQQVQYLIDKGVKGI
                     YVNGSSGECIYLTTEERKQIIEAVMDVAKGKITVINHVACNNTKESAILAAHSEQLGV
                     DAIAAIPPIYFKLPEYSIEKYWNTISDAAPNTDFVIYNIPQLAGVALTNQLYAAMRKN
                     PRVIGVKNSSMPVQDIQTFAAAAGEDYIVFNGPDEQFVGGRMMGAQAGIGGTYGVMPD
                     LFLKLDSLFKTHDITQAQALQFAINDIISKLVSGYGNMYAVAKEVLRINENVDLGSVR
                     APLEPLTEEDKIIAKQAADMIVATRQQFLAS"
     gene            19940..21481
                     /locus_tag="PTC28_000803"
     CDS             19940..21481
                     /locus_tag="PTC28_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HDK5716117.1"
                     /translation="MSTTGFTLVDLFVLIVYLLIVLVAGLYFSKKEMSGKEFFKGDGS
                     VPWYVTSVSIFATMLSPISFLGLAGNSYAGSWILWFAQLGMLIAIPLAIKYVLPIFAR
                     MDIDTAYDYLERRFEAKSLRVISALLFIVYQLGRMSIIMYLPSIGLAKLTGIDINILI
                     ILMGVIAIVYSYTGGLKSVLWTDFIQGVILSGGALIALFVLIKDIDGGMGAIAEQLAH
                     GKFIAPTEKWFDPNILSGSIFLIVFGSGLTIFSSYASSQDLVQRFTTTQNIKKLNKML
                     FTNGVLSLGVATVFYLIGTGLYVFYQLQNVSEATKAIPRDQIFMYFIAYQLPVGVTGI
                     ILAAIYAAAQSTISTGLNSVATSWTLDIQEVVAKQMSDSVRTRIAQIVSLLVGIFSIV
                     VAIVMAHSDIKSAYEWFNGFMGLVLGLLGGIFILGFVTKKANKQGAYAALIVATIVMV
                     CIKYVLPPEAVNYWAYSFISISVSLVVGYVVSLLTGNKTSAPQFTTIHDIPEILADKS
                     WAKRH"
     gene            21500..21949
                     /locus_tag="PTC28_000804"
     CDS             21500..21949
                     /locus_tag="PTC28_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
                     /protein_id="HDK5716118.1"
                     /translation="MIIAERKDFKRYITINPHFEKVNDFLEHTDLSQLEDGRIEIDGD
                     HVFANCMTYIADGVAGEQFENHKKYLDIHLVISNTEKMAVSTPQDASSKTEFDVENDF
                     ELFNSKKYQIVELNETNLLVTFEEDLHQPKVRVNDQTVKKLVIKVLN"
     gene            22305..23075
                     /locus_tag="PTC28_000805"
     CDS             22305..23075
                     /locus_tag="PTC28_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HDK5716119.1"
                     /translation="MDIYQHFRPEEHEQIDYLLDKVRQAETQYAPVLTYFLDPRGQYM
                     LEVIAGSFNDLHVSFDGGRDAERCRAVIAPSYYEPSRDDFELALIEIDYPTKFVTLQH
                     QHVLGTLMSLGIEREQVGDIIVAERIQFVLTKQLESYIMLELTRIKGATIKLHVIPFE
                     DMIQSEEYWETHEATVSATRLDVVLKEMIRKSRTIAKTHIQRKRVKVNHTLIEAADFQ
                     LEAGDLLSIQGYGRAKITEIGDRTKKDKLRITYQTLFK"
     gene            23099..23698
                     /locus_tag="PTC28_000806"
     CDS             23099..23698
                     /locus_tag="PTC28_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DivIVA domain-containing protein"
                     /protein_id="HDK5716120.1"
                     /translation="MAFTPSEIKNKAFTRIKNGFEPTEVEQYLEQLSHEIERLKEDKK
                     QLEKVLEERDAHIQSFKEVEKSVGEAIVSAQRAADETKAAAQKERDAIIQKAQAEASQ
                     IVNDGIEKARRLSFQTEDMKRQSKVFRSRFRMLVEAQLDLLKSDDWEYLLNYDLDSQQ
                     VTEENFQHLNEQDITAQEKQQAEQANQQPNETSSSETDK"
     gene            23899..26646
                     /gene="ileS"
                     /locus_tag="PTC28_000807"
     CDS             23899..26646
                     /gene="ileS"
                     /locus_tag="PTC28_000807"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HDK5716121.1"
                     /translation="MEYKDTLLMPKTKFPMRGGLPTKEPQIQQEWKEKDLYRKMLEKN
                     EGQPSFILHDGPPYANGNLHMGHALNKILKDFINRYKTMQGFYTPYVPGWDTHGLPIE
                     QALTKKGVKRKEMTTAEFRDKCQAFAMEQIDIQKKDFLRLGVNGDFDNPYITLKPEYE
                     AAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDKRSASIYVAFDVKDSK
                     GIVADDAKFIIWTTTPWTLPSNVAITVHPELTYVQMNVDGTRYIIAEALVDAVAEQLG
                     WDKEAVVREKDFKGSELEYIEAQHPFIDRISLIINGEHVTTDAGTGCVHTAPGHGEDD
                     FIVGQKYGLEVISPLDDKGVFTAEGGPFEGMFYDKANQAVTELLTEKGALLKLDFITH
                     SYPHDWRTKKPVIFRATPQWFASISKVRQDILDAIEDTKFKVDWGKTRIYNMIRDRGE
                     WVISRQRVWGVPLPVFYAENGDIIMTKETVYHVADLFEQHGSNIWFERDAKDLLPEGF
                     THPGSPNGEFTKEQDIMDVWFDSGSSHRGVLETRPELSFPADMYLEGSDQYRGWFNSS
                     ITTSVATRGRSPYKMLLSHGFVMDGEGKKMSKSLGNVIVPDTIVKQKGADIARLWVSS
                     VDYLADVRISDEILNQVADVYRKIRNTLRFLLGNINDYNPATDRIAEADLLEVDRYIL
                     NRLREFTAGTLDHYESFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEEKNAHKRRS
                     MQTVLFEILVNMTKLLAPIIPHTAEEVWSHIEQVDEESVHLTNMPAKEEVDQALLDKW
                     NTFMALRDDVNRALEAARNEKVIGKSLEAKVKIGNSPSFDTLAFLEGFNDLHQLFIVS
                     QVELVEDTKGEAYQHGTIEIAKADGEKCARCWNYSESLGSVGELDDLCPRCQEVVKTL
                     V"
BASE COUNT         8919 a         4485 c         5638 g         7787 t
ORIGIN      
        1 actttcctta acaataaata aattcaaatg tcgaatcagt taagatgatg aacttgacta
       61 ttgatagaga tgatagattt cgtgcgcata gggtgaacgt gggcactgga atgtatcatc
      121 tttttttacg ttgaatgaca tgtcgaagtg tgcaatcaag tagtccactc tgtcatagtt
      181 ttatcggccc attcttactc catcagtgaa atcgtatgac agatcatacg tattttgata
      241 cacttagaaa gattcttttg actttcggga ggcgtgaaat ttgagttata aagtaatttt
      301 attcgatttt gatgatacat tggtagattt tcatgacgct gaagtacaag catatgccca
      361 tttaatgcgt cattatgccg taccttctca actacatgat tatcaccgtt ttaaggaaat
      421 taatcaaaat cattgggaag catttcaacg tggagaaata acgaaagcgg aagtattgcg
      481 tcatcgcttt atcgaaacat ttgcgacata tggcatgaca gttgatggtc aagaagcgga
      541 tgttgtcttt cgtgatgggc ttgcacgtgc tcccattaaa tggctcacgg gtatcattcc
      601 tatgttgaaa acacttcaat caaattatgc attagcgata gtgacgaatg gtgtaacaga
      661 tacacaagaa cgacgtatcg cacgaacgga ccttcactcc atgatggatc atatttttat
      721 ttcagataaa attggagcac agaagccgaa tgtcgcattt tttgaagagg tctttaaagt
      781 gtttcatcag tatgataaaa aggacttcct aatcgtgggg gattcactta cttctgatat
      841 tcaaggtggt attaattctg gaattgatac ttgctggttt aaccaccgtc agcttgaaaa
      901 taaaacgtct attcaaccga cgtatacgat taaccatatt gaagcattaa aagagatttt
      961 aaagtaattc aagtaactac catcatttgt atggttgtaa tgtaagtgga agatgattag
     1021 atttccaaaa actagattat catttttcag aaatccaatc ccctcaattt tttagaaggg
     1081 attcaggatt gttttaaaat tgaagggtgc tgttcttagt ttttcaactg agaacagcac
     1141 ccttcaactt ttgttattat ttctggggtt cccaaacgag tatatcgtgc ccatcgtcat
     1201 ttttgacttc taaatcttta aaaccatttt taataaagaa gtctttagac tcatttctcg
     1261 caatcgcttt aataggaagg tcgaatgatt ttgcatatgc gactaatgca gaaccgtaac
     1321 ctttgccttg atatttttta agtacttcga gtttccaaac gacgagataa tcgtcaaagt
     1381 tcggaaaaaa tgtctcttca acttcgcctt ttcgataaag tgccatacgt gcgccaattt
     1441 tttccccaac ataaatacca taaaatggtg actcagaact ggcatcaatc atctcaccgt
     1501 gcagttcgtt caccatgtat aaatctttgt tgccaaaatt ttgacgaaag tcttcaaaaa
     1561 gttcttctgt tttgtagtta atgtcaaggt gctcaacttt tgtcatgtga ttaccccctt
     1621 gtctttaata atttaattat agcctattta ttttaaattt tgaagcaagc cgttagattg
     1681 tcatgtgcgt gtggaacctt tatactgtta tggaatactg tttaaggaga aatgagcatg
     1741 gattgtttaa atattacagt caatgagtcg gatcaattta taaaccgttt aaaacaacaa
     1801 gatgaaaata tattgcaatt ttttgattat gatccggttg aagaggaaag ttatgcacgc
     1861 cgtatgcaac aacctaacaa tggtagagaa catgaaatgg cgaaagttgt gcgcgcgtat
     1921 atggcggatt taaacctttc tgaagcccaa caacgtgcac tcgatgcttt agaaaatggc
     1981 gcgaaagtcg tcgtaggtgg tcaacaagca gggttgttta ctggtccact ttatactttc
     2041 cataaaatta tttctatcat cgttaaggcc aacgaactgg aatctacata tgagacgcct
     2101 gtcgttccag tcttttggat tgcaggtgag gaccacgact ttgatgaagt caatcatacg
     2161 tatgtgatgc aacaacgaac tgggacgctg aaaaaagtga aatatcacac gatggcacca
     2221 ccagagtcca atgtgtcccg ctatgcccct gataaagcgg cattgaaaca agcattgact
     2281 gattattttg cagcattacc tgaaacaccg cattcgaaag tattgtatca acaaattgct
     2341 cattttatcg atcaagcaga caattggaca tcgttattca aacaaatcgt acatgaatgt
     2401 tttagtcagt caggcttatt attgattgat gcccaatttg aagcgttacg tgaaatagaa
     2461 gtgccgttgt tcaaacaaat cattcaacat cacgagcaga ttgacaacgc ttttcgaatg
     2521 caacaacaac gtacaggtgc tgctgggtta acaccaatga ttcaaaccga tacaaatgtc
     2581 cacttgttca tgcatgaaga tgggcaacgt cagttattaa agtatgaaga tggtgtctat
     2641 cgtttaagta aatcggatgt cacgttcagt caagcagcgt tattacaaaa aattgaagcg
     2701 acaccaacag atttttctaa caatgtggtc acgcgtccgc ttaccgaaga atggttgttt
     2761 aacactgttg catttatcgg tggaccgagt gaaattaaat actgggcaga gttgcaaacg
     2821 gtctttcatg aaatgggcat tgaaatgccg attgtattgc cgcgcttacg tttcacatat
     2881 gtgacaccta aaatcgaaaa attgttagct tcatatgacc ttgatttagc agatatgatt
     2941 gcgaatggta cggaagcagc acgtcaacgt tttgtacgtg ctcaagcttc tgaagaggtg
     3001 cttgtggata tgcaacaaat gctcgaccag caacatgcct tttatgagcg tttgcaagca
     3061 cagttaaatg attcggaaga tcagcgcaag ttactgaaga agaatcatca aatccaaacc
     3121 catcaatatg aatatttaca gtcacgttac cttaaaaata ttgagcgtga aaatgaaatt
     3181 agtatgcgac atttccattt attgtcacaa acgttatatc cgatgggggg attgcaagaa
     3241 cgtatctgga acccactcca attattaaat gaatttggga tggagatgta cacgtcctcc
     3301 actttccctc cacttcgtta ctcttttgat caatatgtca ttaaaacatg ataatatcaa
     3361 cggtttgaga acccttctta atatgagcag ggttcttttt ttgtgtctat tttgataaat
     3421 attggagatt tttacagaat tagtggagga tagtggtgag atgtggtaaa ttagaataaa
     3481 ggtgaggtga taatagaatg ttcatgggtg aatacgaaaa taaactcgat gctaaaggcc
     3541 gtatgatagt accatcaaaa tttcgttatg acttaaatga acgttttatt ctcacaagag
     3601 gccttgataa atgtttattt ggttacacac ttgaagaatg gcaaacgatt gaggagaaaa
     3661 tgaaatcctt acctttaact aaacgtgatg cacgtaagtt tgtgcgcatg ttcttctcag
     3721 gtgctatcga agtggaaatc gataaacaag ggagaattaa catcccagct aaattaagag
     3781 agtatgcaca tcttgacaaa gaatgtacgg tgattggtgt gtcaaatcga attgagattt
     3841 gggatcgcaa cacttggaat gatttctatg atgaatctga agagagcttt gaagagattg
     3901 cagaagactt aattgatttt gatttttaaa aaacggaggg ttcgcggtgt ttcatcacat
     3961 tagcgtgtta ttaaaagaaa ctgtagacca actgaatatt aaagaagatg gcgtctatgt
     4021 tgattgcacg ttaggtggcg caggacattc gcaatatctt ctgaatcaat tatcggatga
     4081 aggtcgattg attgcgattg atcaagatat gacggcaatc aatcatgcta aagaaaaatt
     4141 gcaacaagat ttacataaag tcacgtttgt acataacaac tttagaaatt tagctaatat
     4201 tttagctgaa ttaaacatag acaaagtgga cggcatttta tatgacttag gtgtttcgag
     4261 cccgcaactg gatgtaccag aacgagggtt tagttaccaa cataatgcca agttagacat
     4321 gagaatggat caaacgcaac ctctttccgc ctacgaagtt gtcaatacgt ggtcttatga
     4381 aacactcgta aaaatctttt ttcgatatgg ggaagaaaaa ttttcgaaac aaatcgcacg
     4441 aaaaattgaa gcaagacgac agcaacaacc gattgaaacc acttttgatc tagtggcgtg
     4501 tattaaggaa gggattccag caaaagcacg acgtaaaggt ggtcatcctg cgaaacgtgt
     4561 atttcaagcg attcgtattg cagtgaatga tgaacttgct gcatttgaag attcattaga
     4621 acaagcgatt gaccatgtga aagtgaacgg acgaatttct gttatcacct tccattcatt
     4681 agaagatcgt ttatgtaagc aaatgtttca agagtatgaa aaagggccag acgtcccaag
     4741 aggattaccc gtacttccag aagcgtacac acctaaattg aaacgtgtga accgaaaacc
     4801 aatcgtagcg gatgcgacag acttagaaga caatcatcgt gcgagaagtg caaaacttcg
     4861 agtagccgaa atattaaaat agaggggcga aaaagagact atggctgtag aaagaatata
     4921 tgatacctat caaccgcaag tcgaaccaca gagaaaacaa tcgacacaaa aacaaactat
     4981 caagaagcaa gttgttgtca aattaacacg atttgaaaag atgttataca taacgctagt
     5041 tacgattatt gctgtcatca gtatctatat gctatcttta aaaatggatg catatgatac
     5101 gagagggaaa attgcagatt tagatcaaaa aatagaaaag caaacaagtc aaaatagcgc
     5161 attaaagtct gaaacaatgg aaaattcatc gtacaaacgc atttataaaa aggctgaaga
     5221 tcaagggatg agcttgaaga acgacaatgt aaaggtagtg cgtaaagatg gcgaaacgaa
     5281 aaattaaaat taaaaaaaat aagctaggag cagtccttct gatgggtgtt ttcgggctgc
     5341 tcttttttct tttggtttta agatatggct atgtcatgtt gacaggacac tcgtcagggg
     5401 aagacttgat cgccaaagca aatgaaaaat atttatctca tttagatgaa gatgctgaac
     5461 gaggtaagat ttatgaccgt aacggtaaag ttttggcaga agacgtggac cgtttccgtt
     5521 tggcagcagt tattgatcca caagcaagta aagattcaga caaaccacgt cacgttgtgg
     5581 ataagaaaaa aacagctaaa gttctcgcta aaattatcga tatgcctgaa aaggacatcg
     5641 agaagcgtct caacacgaaa aaggcattcc aagtcgagtt cggccgatcg ggtcaaaatc
     5701 tgacttatca agataaagaa aaaattgaaa aagcgaattt acctgggatt acactttatc
     5761 cagaagtgaa gcgcttttat ccaaatggta agttcgcctc acacttgatt gggatggcac
     5821 aaaaagatcc cgatagcggc aaattaaaag gggctttagg cgttgaaaag attttcgaca
     5881 gttatcttaa aggtaaagcc ggccatactt catttacaaa agatatttgg ggttacatta
     5941 ttccgaattc gaaaaatgaa gtcgcaccgc aacgtggcga tgatgtgcat ttaacgattg
     6001 attctaatat tcaagtcttt gtggaagaag cattagataa aatggttgag cattatgaac
     6061 caaaagacat cttcgccgtt gtcatggatg cgaaaacagg tgaaatctta gcttatagtc
     6121 agcgtccaac attcaatcca gatacaggtg aagattttgg taaaaaatgg gcgaatgatt
     6181 tatatcaaaa tacgtatgaa ccaggttcga cattcaaaag ttttggttta gccgcagcga
     6241 ttcaagaagg ggaatttaaa ccagaccgta aatatcaatc gggttacaga gatattcaag
     6301 ggtcacgtat ttatgactgg aataaaaaag gttggggcga aattgatatg agtcccggct
     6361 tcacgtattc atctaatact ttgatgatgc gccttcaaga ccttgtcggt gcagacaaaa
     6421 tgaagtcttg gtatgaaaag ttcggttttg gcaagtcaac gcgaagtttg tttgatggtg
     6481 aacaatccgg caatattgcc tgggaaaatg aattgatgca aaaaacatct gcgttcggtc
     6541 aatcgacaac agtcacgccg gcacaaatgt tgcaagcgca atcggcattt ttcaataaag
     6601 gcgaaatgtt acgcccatac ttcgtccaat ccattgtaaa tcctgtgact aaaaacacat
     6661 attataaagg tgaacgcgaa gttacgggca aaccgattaa aaacgataca gcgaagaaag
     6721 tgaacaaaca attggatgaa gtggtgaaca gtgaagatag ccatgcgaaa aactatcgtg
     6781 tcgacggata tcgtattggt ggtaaaacag gtactgcaca ggtggctgac cctgaaaatg
     6841 gcggctatgt gaaaggacct aatccatact ttgtgagctt tatggggcat gcgacaagta
     6901 aaaatccgcg tgttgttgtt tatgcaggga tgagcttagc gcaaaagaac gatcaagaag
     6961 catacgaaat gggtgtcagc aaagcattta atccgattat gaaaaacact ttacaatatt
     7021 taaatgtcgg cgataatgaa gtagatgaca gtaaaacgaa gatcagcaat gttccagatg
     7081 ttgaaaatcg tagtgtacaa cgtgctgaag atgagattag aggtaaaaaa ctcaacccaa
     7141 ttgtcattgg taatggtaaa aaagttgtga gtcaatcgcc gtcatcaaat ggtcgattat
     7201 tgccaaatag taatgtcctt ttgttaactg aaggtgattt aacaatgcca gatatgacag
     7261 gatggacaag agatgatatt gtcgccttcc aatcattgac agatatcaaa attgatgtca
     7321 aaggcagtgg ttttgtgaag tcgcaatcga aaacaccaca gtcagcgata gataaaaaca
     7381 ctaaacttga agtaacatta gattcccaaa aaacagaata ggcaacgtga taaacagaca
     7441 ctgtgcgaaa ggctatcacg gcatgttgat gtttatgacg atgcgtaagt tgaaaagaac
     7501 ggccatgaat gcaatcactt cagtcgactt atacgaatac gcgcattgaa gtgatcgcat
     7561 catgtttaga atgactaaga atgtgagcaa aagaagagaa gataagataa ggagaatatt
     7621 atgggattga ttagcgcaat tatcgcattt gttattacag cagttttagt accgattttg
     7681 attccaacat taaaaaggat gaaatttggt cagagcattc gtgaagaagg tccacaaagt
     7741 catatgaaaa aaacaggtac accaacgatg ggtgggttaa catttttaat tggtgcaatt
     7801 gttacaacga taatcgcaag tatttttgta gaaccagcaa gtccattgct gttactactc
     7861 tttgtcacaa ttggttttgg tttaattggc tttattgatg actatattat tgtagtgaag
     7921 aaaaacaacc aagggcttac aagtaagcag aaatttttag cgcaaatcgc aatcgcagtc
     7981 attttcttta ttgtcgctaa aggttttaac gcgtttaatt tctctacaga tattcatatt
     8041 ccgtttacag atgtgagtat cccgttatca tttgcttatg taatttttat cgtgttctgg
     8101 caagttggtt tttctaatgc agttaattta acagacggtc ttgatggttt agcgacaggg
     8161 ttatctatta ttggttttac gatgtatgcc attatgagtt ttgcgcttga acaaccagca
     8221 attggcgtat tttgtattat catggtcgca gctttagccg gctttcttcc atataatatt
     8281 aacccagcga aagtgttcat gggggataca ggaagtttag cgctaggggg tattttcgct
     8341 acaatttcaa ttatgttaaa ccaagaaata tctttgttat tcatcggtct cgttttcgta
     8401 ctagaaacat tgtcagtgat gattcaagtg acatcattca agttaacagg aaagcgtgtc
     8461 tttaagatga gtccattaca tcatcatttc gaattagtcg gttggagtga atggaaagtt
     8521 gtgactgtat tctggtcagt aggattaatt actggtttaa tcggtttatg gatgggagtg
     8581 aattaattga tacattatac agggcttaga ggtaaaaaag tactcgttat cggtatggcg
     8641 aaaagtggtt atgaagcagc gaaattgtta catcgtttag gcgctgaggt gacggtgaac
     8701 gatggcaatg atttatcaaa cgatgctcac gcgaaatatt tagaggactt aggcattagt
     8761 gtcgtcagtg gtgcacatcc gcttgcgtta ttagatgagg caccgatcat tttcaaaaac
     8821 ccaggtattc catatacagt acctattatt caagaagcac aaaaacaagg attgaaaatt
     8881 ttaacagaag tagaattaag ttatttaatt tctgaagcac caattatagg cattactggg
     8941 acaaatggta aaacgacagt aacgtcatta atcggtgaca tgtttaacaa aagccgtgaa
     9001 aatggtcgtt tgtcgggaaa tattggtttc gttgcatcaa aagtcgcaca agaagtgaag
     9061 acagatgagt atttagtgac ggaattgtct tcgttccaat tgctcggtat tgaacattat
     9121 cgtccgcaca ttgcgatcat cacaaatctt tattcagcgc atttagatta ccatgaaaat
     9181 cttgaaaact atcaaaatgc gaaaaaacgt atttttgaaa atcaaactga gagcgactat
     9241 ttaattttca atgataaaca aagacacctc attgatacat cgaaaattcg agctaaaatt
     9301 ttatactttt ctacgcaaca tcgtgtagac ggtatttatg ttgaaaaaga gtatattgtt
     9361 tataacggtg tacgtctcat tcatttagat gatatcgtat taccaggtga acacaactta
     9421 gaaaacattt tagcagcagt catggcggcg attttagcag gggtgtccat tagtgctatc
     9481 gtccaatcgt tgtctacgtt ttcaggcatt gcacatcgtc tgcaatacat tggcaataac
     9541 aaaacgaata aatactacaa cgattctaaa gcaacgaata cattagcgac acaatttgcg
     9601 ttaagttcat tcaagcaacc tgtcatttgg ttatgtggtg gtttagaccg tggaaatgat
     9661 tttgacgaac tgattccgta tatgaacaat gtgcgcgtaa tggtgacgtt tggtgaaaca
     9721 caagataaat ttgtgaagct aggagagagt caaggaaagt atgtcattcg agcaaaagat
     9781 gtgacagatg ctgtagctaa agtccaagat gtcatcgaac cgaatgatgt tgtattatta
     9841 tcccctgctt gtgcaagttg ggatcaatat gacacctttg aacaacgtgg agaacgtttt
     9901 attgaagctt tcagagcaca tttgccatca cattaaagga tgtgacgatt gatgacaaaa
     9961 gaaatatcca agattaataa cgaatattta aaagaaaaga gaaaaaagca acgtattcag
    10021 caacgtcgtg ttcaacgtat gattgtcggg atactcgttg tcattgtttt attgatcctg
    10081 gtttatatgt ttacacctat cagtcacatt aaaagtgctg acattaaagg gaaccattat
    10141 gtgtctaagc aagatatctt gaaagagctg gatattcaaa accatccacg catttacgcc
    10201 tatagttctg atgatgctga gacacgtttg aaacaaaacg aattgattga tgaagtgacg
    10261 attgaaaaag gactgttcaa tccgatcgag gtcaacgtga aagaacatac tatcatcgca
    10321 atcacgacag aaaagtcacg tgtggtccca atgattgaaa atggcaaagt gttaaaagat
    10381 tataaacagg aagtaccgaa tgaagcacct tacattgaag ggtttaaagg tgctgaaaaa
    10441 cgcaatctca ttgatgcttt acaaaaaatg gatcgaacga cgcgggcaca aatttcagaa
    10501 attgtgagtg caccacaaaa agatcaaccc catttaatta aactgttcat gcgtgatggg
    10561 attgaagtcg ttgggaatac aaacaccatt gctgaaaagt tgaaatacta tccaagtatg
    10621 tcacaagctt tagaaaaaga tgaaacaggc aaattgaaaa aatctggttt tatagattta
    10681 tcagttggtg cgacatttat tccttatgac aatgtgaaca acggacaaac aaattcggcg
    10741 agcgccaaag aagttcaaag tggtacagcg agtgaagaca aagctaaaga tgatttacaa
    10801 aaggctttga acaagattaa agatgaagaa tcatcggaat agcaaagttg aggctcaaaa
    10861 atattttgtt atcataatga ttttgagccg tcatctacct tgtaaataga tgattgcgcg
    10921 ttacaaaaag attacattaa tatataaatg tgataaaaag ttgaaattcc actgtgttta
    10981 tagttcacat tgatagtgtg ttattgtaaa cttaaaatag cttaattatg taaagaaatg
    11041 tcaggaggtg cctatctatg gaagagcatt attatgttag tgtagatatc ggctcatcaa
    11101 gcgtgaaagc gattgttggt gaaaaatttc ataacggaat taatgtgata ggtacagggc
    11161 agacctatac aaatggaatc aagaatggtt tgattgatga tttcgacctt gctaaacagg
    11221 ccattaaaga tacgataaag aaagcttcaa tcgcttcaag tgtggatatt aaagaagtat
    11281 ttttaaagct accaatcatt agtactgaag tttttgatga aacaaataaa atcgaatttc
    11341 atcaagatac agaaattaac ggcacacata ttgaagaggt gcttgaagga attcgtgaaa
    11401 aaaatacgga acctgaaacg gaagtcattg atacattccc gattcgcttt atcgtggatg
    11461 acaacaatga agtttcagat ccaaaagagc ttgtcgcgcg tcactcttta caagtggatg
    11521 caggcgtcat tgcgattaat caatcgattt taattaatat gattaaatgc gtagaagctt
    11581 gtggtgtgga tgtattagac gtttattctg atgcattgaa ttaccgttcc gcattaactg
    11641 caactgaaag agaacttggt gcatgtgtga ttgatatcgg tgaagattta actcagattg
    11701 cgttttatga acgcggagag ctcgtcgatg cggatgtcgt tttcatggca gggcgtcaca
    11761 tcacagaaga tattgctcaa tttttaaata ctacatatga tacagcagaa aagattaagc
    11821 aacaatacgg acatgcattt tatgattcag cttcagacca agatgtgttt actgtaaacc
    11881 aacttgactc tgatgaacct gcacaattta cacaaaaaga gctgagtgat gtcattgaag
    11941 cacgtgttga agacattctc attaaagtat tcgatgtttt acaagagtta ggtttaacga
    12001 aagtcaatgg tggatttgta gtgacaggtg gttctgctaa cttacttggt gtgaaagaat
    12061 tacttctcga tatggtgaat gaaaaagtac gcattcatac accttcacaa atgggagtaa
    12121 gaaaaccaga attttcttca gcaatttcca caatttctag tagtattgct ttcgatgagc
    12181 tattggatta tgttacaatt agtaatcatg ataatgaaga aattgaagaa gaaatcattg
    12241 aaagcgattc aaaacgacaa gaacataaat caagtggttt tgagtcattc ttcaagaaaa
    12301 aaccaaaaaa acaacaatca caagacacgg caaattctga atttgtcgac gatgatactt
    12361 cggaagaggt atatgaagac attgatggac atgaacacgg agaacctaaa caagaagaaa
    12421 gtaagttcaa gaagattatg aaatcactgt ttgattgatt ggctacaaag attaggagga
    12481 aatttaaatg ttagaatttg aacaaggatt taatcattta gcgacactta aagtcatcgg
    12541 tgtcggtggt ggcggtaata atgctgttaa ccgaatgatt gaccacggta tgaacaatgt
    12601 tgaatttatt gcaattaaca cagatggaca agctttaaac ttatctaaag cagaatctaa
    12661 aatccaaatt ggtgaaaagt taacacgtgg attaggtgca ggtgcgaacc ctgaaattgg
    12721 taagaaagct gcagaagaat cacgtgaaca aattgaagat gcgatccaag gtgcagacat
    12781 ggtattcgta actgctggta tgggtggcgg tactggtaca ggtgcagcac ctgttgtagc
    12841 caaaatcgct aaagagatgg gcgctttaac agtgggtgtt gtgacacgtc cattcagttt
    12901 cgaaggtcgt aaacgtcaaa cacaagctgc tgcgggtgtt gaagcaatga aagctgctgt
    12961 tgatacatta attgtcattc ctaatgatcg cttgttagat attgtagaca aatctacacc
    13021 aatgatggaa gcatttaaag aagctgacaa cgtattacgt caaggtgtac aaggtatttc
    13081 tgatttaatt gcagtatctg gtgaagtgaa cctcgacttt gctgacgtta aaacaatcat
    13141 gtcaaaccaa ggttctgcat taatgggtat cggtgtatca tctggtgaaa accgtgcagt
    13201 tgaagcggct aaaaaagcca tttcttctcc tttacttgaa acatcaatcg taggtgcaca
    13261 aggtgtgtta atgaacatta ctggtggcga atcattatct ttattcgaag cacaagaagc
    13321 tgctgacatc gtacaagacg ctgcagatga agatgtgaac atgatctttg gtacagtcat
    13381 taacccagaa ttacaagatg aaattgttgt tactgtgatc gcaacaggtt ttgaagataa
    13441 gccttcatca caagcccgta aacaaggtca ctctggcttc ggtgcaagtg ctacaccaac
    13501 aagctcaaaa gaatctagct tcggtggtgg gcacactggt caaacttcaa cacaagataa
    13561 agaagttgaa agtggacgta gccatacgac agcggacgac gatattccaa gctttattcg
    13621 taacagagaa gaaagacgct caagaagaac acgtcgttaa tcgtgtgata tgttgaaata
    13681 taaagtacac ctatcaacag gataaagtgt gatatttatc ttacatagga tgtcaagaac
    13741 tgctaggaca attgtcactt catcaatgtc ctagcagttt ttaatagata aaagtaaaaa
    13801 aggagggatg aagatggaat tatttacgaa aaagggacat catttatctt accagccgag
    13861 tttagtacaa ggtgttcaaa ttggcatcac gacaagaggt gatggcgtga gtgcatatcc
    13921 aaatgcagca ttcaacatgg caagatatat tgatgataag ccggaaaata ttacccatca
    13981 tcaggaagta ttggcacaag aaatcggtat tccgagagcg caatgggtct ttccaataca
    14041 gacacacgaa gcaaatgtcg tagaagtgac tcaagcggat cgtggtaaaa atattgatgc
    14101 actttcgaaa gacacacttc atggtttcga tgcgatgttc acatatgatg aggatacgat
    14161 gttgacgatg tgttatgcag actgtgtgcc gatttacttt tatagccctt ctcatcactt
    14221 tattgctttg gcacatgcag gttggcgggg cactgtcgca actattgtac atcgtgtatt
    14281 agaccaattt ccttatgatt acaacgactt atacgtggtt attggtccag caacatctga
    14341 tagttatgaa attaatgatg atattttcaa acaatttcag caactgccga ttgacagtgc
    14401 agcttatatt gaaacgcgtg atgaagaccg tcatggaatt gatttgaaat atgcgaacca
    14461 actattgtta gaacaatacg gcgtgccacg tgaccatatt tatcgtacag aatatgcaac
    14521 ttccgaagac ttggatttat ttttctcgta tcgtttagaa aaaggaaaaa cgggaagaat
    14581 gttagcattt atttctcaat cattgaatga aagtggagat gattaaatgt cagtgaagac
    14641 aaacttagca gaaatagagc acaccataac tgaaaatgtg acttttcgtg aggacccaac
    14701 aagacctcac gtgattgctg tcacaaaata tgttacaata aaccgagcga aagaagctta
    14761 tgaagcaggc attcgtcatt ttggtgagaa ccgcatcgaa ggttttttag agaagaaagc
    14821 agctttacca gacgatgtcc acatgcattt tattggttct ttgcagtcac gtaaagtgaa
    14881 agaagtcatt aatgatattg actatttaca tgcattagac cgtcaaagtt tggccaaaga
    14941 aattagtaaa cgcgcagaac atgaaatcaa atgttttgtc caagtgaacg tttctggtga
    15001 agcatctaaa catggtattg ctttagaaga ggttatcccc ttcattgaaa agttagtgga
    15061 ctatgaccat attcgtgttg taggtctgat gacgatggca ccatacacag ataatgaagc
    15121 tgaattagaa gacatttttg aaaaacttaa aaataaacgc gatgaagtcc aatcattgaa
    15181 ccttacatat gcaccttgta cagagctttc gatgggtatg agtaatgatt atcatattgc
    15241 cacgaaaaag ggtgccacat ttgttagaat tggaacgcgt cttgtaggaa aagaggagtg
    15301 aatccattgg ctataaaaga tttgttcaac aattttttca caattgaaga agaggaagat
    15361 gaagatttca ttcaagaaga agaacgccgt cgtgaacgtg agcaacagca agtgcaacaa
    15421 caagcgaaca aacaacaatc tgagcgtcca agagcagtcc aatccgtacc caaacgtcaa
    15481 gcgtcacgtt ccaaatcttc tcaaaatgat aaacagttgc aagttgccca aaaacaagag
    15541 caagggaatg tggtgaatat gagcccaaca caagatactt atcaaaatgg gagttctaaa
    15601 atgtgtttat ttgaaccacg tgtattttct gatacacaag acattgcaga tgaattgaaa
    15661 aatcgtcgtg ccacacttgt gaatcttcaa cgtattgatc aagtttctgc aaaacgtatt
    15721 atcgactttt taagtggtac cgtttatgcg attggtggcg atattcaacg tgttggtgca
    15781 gatattttct tatgtacacc agacaatgtc gaagttgcgg gtagtattac cgatcatatc
    15841 gaatctatgg aaaatcatta taaataaggg agtatgctat gaacatcgag ttattaacat
    15901 ccatccttga atttctactg tttattgtta aagcttacac atttggaatg attatttaca
    15961 tttttatgtc gtggttacca ggtgcaagag aaagcgcagt tggaagatgg atgtcaaaaa
    16021 tttatgagcc atttttagaa ccatttcgac gtatcattcc gccattaggt ctagttgata
    16081 tttcaccgat tgtagccttt ttagtgctca atttgtttga acgtggactt gtagccattt
    16141 ttaatcttat tttgcatcaa atctattcat aaaatacagt ataatcaaaa gactgttcag
    16201 acgtgatgac gacgtgtttg aacagtctat tttttatttg tgtggtgatg ttaagaaata
    16261 ggcatcaagt ttaatacgat ataatcagca gtgatctaat gcttaagcgc attaaatcaa
    16321 cagtaactgt cccccctcaa caaaaaagcc cctccataac gcaatcatca cgaacgcgtt
    16381 ggaagggctt attttagatt gatttaaaat gtcacgtcag attctaaaat aatattagaa
    16441 aacggagtga tttcgccagt gcgaatatta cctttattca atgggtgact taaatatgat
    16501 ttcatttctg agtgtggaat aaacgcaatc tcgacatctt gatcaatcaa tgctttaatt
    16561 tgtttcaatt gtgtcgggtt atgtgtttta atttcttcgg cgagataaat tttttggatt
    16621 tttaattctt ctaacactgc tgctaataca tcgataaaga gcggtaatgc ttttgttaca
    16681 gctaaatcga ttcttctgtc atcgttagga attggcatcc ctgcatcatt gacggtcaac
    16741 aagtcgaagt gacccattgt tgcaataact tgagaaacgt ggctgttaag taaagctgct
    16801 tttttcattc tcttcacctc tggctattat ttaataaata cagtgactgt tgcggctgct
    16861 aaaatcaaaa ttaaaccaat gattgtgata aacatttctt ttgaagtttt acgctgattc
    16921 aagaaataaa tacctgttaa cgtagctaaa acaactgaag tttgagataa gatgaaacct
    16981 gttgctaaac cattcatatc aggttgtgct gagattaaat atgtcaatgc tgcgaaagca
    17041 aagaagaaac cagaaatgat ttgcaaccat gtaactttct tgttgaatgg attgtctttt
    17101 ttcattgtca ttaaaccata aatgatggcc gacaatacca ttccaatggc ttgtggtaaa
    17161 aatgctactt taccaccaat gtctgtcgct tgtggtgcag cagagtaaag ccaatatcca
    17221 atttcaccga ttaataggat aaggactgct tttctcaagt tactactttt tgtttcttgt
    17281 gcatcttcac tccaaactgt catccatgcg ccaattaaaa tcacgattaa tgcggcaaaa
    17341 ccaatcagtt tatttgtaac acctggccag ttacctaatg cgaatacacc ccaaagtgat
    17401 gcaccgagta gttggaaagc tgttgtgata ggcattgcac gagaagaccc gatatattca
    17461 aatgctttga aagtcataat ttgaccaaaa caccagccgg ctcctgagag taaggcgaaa
    17521 aacaaatcta gtcctgttgg gaattgacgc cctgaaaata taaaaaaggc aattgcgaaa
    17581 atcagtgtcc caacagtagc gccgataatc tgattgactg gtttacctcc aaattttgat
    17641 gcgattgtag gaaaaagacc ccaaccaatg agcggtccta agccaattaa tagtgcgacc
    17701 atgttcatta cttacactcc tctatttcta ttaaacattt tgtctttcat taacaagtcc
    17761 acgttttaaa atataccatt tctatatgaa tatataaact aacatttact aaaattcaaa
    17821 actattattt gggaaattta aggattgaaa caaacttgtc acacatgtcg gctaagaaga
    17881 gggatttggg taatagtgtc agttaacgaa ttaaaaatga accgaaagcc aatcagaaag
    17941 ttatttataa acgatattat atttattctg aaactcgttt ccaaaataat agtattgctt
    18001 gaaaagtaga acgaaacggc atacaattaa atttgtaaac gcttgcaacg atgaggtgtg
    18061 aacaatgaga ttttataagg tactcgttcc tatgattgaa tcgaatcttg aaaatatgac
    18121 aacaacagaa aaagaggtcg cacaattttt tctgaaacaa gtaactgttg aggatttatc
    18181 gtctgaaatg tttagcaacc aactgcacgt gtcaaaagca acattaacac ggtttgcgaa
    18241 aaagtgtggt ttcacgggtt ttagagaatt tttgtttcat tatagagaaa tgatgcgtga
    18301 aaaagaggac attctcgcat acaaagattt aatacaaaaa gttttgtttg attatgaaga
    18361 gatgcttcgt aaaaattatt cgattctcaa tgaaagtcag ttagaacata ttaaagagat
    18421 gattaatcaa gctgaacgtg tatatcttta tggaaaggga agttcggcgc tggcattaaa
    18481 agaaatgaaa atgagattta tgagactcgg cattatttgt gaagtgattg aagataatga
    18541 catgcttgtc tggaataatt tattagtaga tgcgtcatgt ctcgtgattg gtgcttcaat
    18601 ttcaggcaaa acaagttccg tcctacatgc attaaaacgt gccaaagcac aaggtgcaca
    18661 aactgttttg atgacgaccc gaaattttaa tgcacatgaa ttcggatgtg atgaaatttt
    18721 gttgttagca gcagctaaac atttatcgta tggcaatgtc atttcaccgc aatttccgat
    18781 attactcatg acagattgtt tgttttctta ttatttggag gatcctcaaa gggggaagta
    18841 ttacgatcaa acgattatag ataaagaagc gcaatctcat catcatgatt agggcgtgtt
    18901 ataccgtttt ataagtgttt tgcaataaaa tattgatata aacattttaa taaaattcac
    18961 taaaatcatt aagaagagga gaatggatat gagagattta aatcgatatc aaggcattat
    19021 tccggcattt tacgcatgtt acgatgaaaa cggggaagtc agtcaagaac gcgtacgcca
    19081 acaagtacaa tatttaattg ataaaggtgt aaaagggatt tacgtgaatg gttcttctgg
    19141 ggaatgtatt tatttaacaa ctgaagagcg taaacaaatt attgaggcag tgatggatgt
    19201 cgcgaaaggt aaaatcaccg tgattaatca tgtcgcgtgt aacaacacca aagagagtgc
    19261 gattttagca gcgcattctg aacaactcgg tgtcgatgcg attgcggcga ttccaccgat
    19321 ttactttaaa ttaccagaat attcaatcga aaagtattgg aatacgatta gtgatgcggc
    19381 accgaataca gattttgtta tttacaatat tccgcaatta gcgggtgttg cgttgacgaa
    19441 tcagttgtat gcggcgatgc gtaaaaaccc tcgtgtgatt ggcgtgaaaa actcttctat
    19501 gcctgtacaa gacattcaaa cgtttgcagc ggcagcgggt gaggactata tcgtatttaa
    19561 cggtccagat gaacaatttg tcggtggccg aatgatgggc gcgcaagctg gcattggcgg
    19621 tacatatggt gtgatgcctg atttattttt gaaattagat tcattattta agacacatga
    19681 tattacacaa gcacaagcac ttcagtttgc gattaatgat atcatttcaa aattagtgtc
    19741 tggctatggc aatatgtacg cagtcgcaaa agaagtgtta agaattaatg aaaatgtgga
    19801 tttaggctca gtgcgtgcgc cgttagaacc attgacagag gaagataaaa ttattgcaaa
    19861 acaagcagct gacatgattg tcgcgacaag acaacaattt cttgcatcat agtgaatgca
    19921 tcataaagga gcgttgatta tgagtacaac tggatttaca ttagttgact tatttgtgtt
    19981 gattgtttac ttactcattg tgttagtagc ggggctctac ttctcgaaaa aagaaatgtc
    20041 agggaaagaa ttctttaaag gggatggctc ggtcccgtgg tatgtgacgt cagtatctat
    20101 ttttgcaacg atgttaagtc cgatttcgtt tttagggctt gctgggaact cttatgcagg
    20161 cagttggatt ttatggtttg cgcagttagg gatgctcatt gcgattccat tagccattaa
    20221 atatgtactg ccaattttcg cgcgtatgga cattgatacg gcttacgatt atctcgaacg
    20281 ccgttttgaa gcgaaatcgt tacgtgtcat ttcagcgtta ctgttcatcg tgtatcaact
    20341 cgggcgtatg tccattatta tgtatttacc ttcaatcggt ttggcaaaat taacaggtat
    20401 tgacattaat attttaatca tcttaatggg tgtcatcgca attgtttact cgtatacagg
    20461 tggtttgaaa tctgtacttt ggacggactt tattcaaggc gtcatcttat ctggtggggc
    20521 attaatcgca ttgttcgtat tgattaaaga tatcgatggc ggtatgggcg cgattgcaga
    20581 acaattggct cacgggaagt ttattgcacc gacagaaaaa tggtttgatc caaacatatt
    20641 atcaggctcg attttcttaa tcgtgtttgg ttctggttta acgattttct catcttatgc
    20701 ttcttctcaa gatttagtac aacgttttac gacaacacaa aatattaaaa agttaaataa
    20761 aatgttgttc acaaacgggg tattgtcatt aggtgtagcg acagtattct atttaattgg
    20821 aacaggttta tatgtgtttt accaacttca aaatgtgagt gaagcaacga aagccattcc
    20881 acgtgaccaa atttttatgt attttatcgc ttaccagcta ccagttgggg tgacaggtat
    20941 cattttagca gcgatctatg ccgcagcaca gtcgacgatt tcgacaggtt taaactcagt
    21001 tgcgacgtca tggaccttag atattcaaga agttgttgcg aaacaaatgt cggatagcgt
    21061 gcgtacacga attgcacaaa tcgtctcatt attggtcggt attttctcaa ttgtagtggc
    21121 gatcgtgatg gcacattctg atattaaatc tgcgtacgaa tggttcaacg gctttatggg
    21181 actggtgtta ggtttacttg gtgggatttt cattttagga tttgtcacta aaaaagcgaa
    21241 taaacaaggg gcttatgcgg cgctaattgt tgcgacaatt gtgatggtgt gcattaaata
    21301 cgtgttgcct ccagaagcgg taaactactg ggcgtattcg ttcatttcaa tcagtgtgtc
    21361 tttagtggta ggttatgttg tgtcattatt aactggaaac aaaacatcag caccacaatt
    21421 tacaacgatt catgacattc ctgaaattct tgcagataag agttgggcaa aacgtcatta
    21481 attaaggagg atgtttgtaa tgattattgc tgaaagaaaa gattttaaaa gatatattac
    21541 gattaatcca cattttgaaa aagtaaatga ctttttagaa catacggatt tgtcacagtt
    21601 agaagatggt cggattgaaa ttgacggaga tcacgtattt gcaaactgca tgacttatat
    21661 tgcagatggc gttgcagggg agcaatttga aaaccataaa aaatatttag atattcatct
    21721 tgtcatcagt aacactgaaa aaatggcggt gagcacacct caagatgcat cttcaaaaac
    21781 agaattcgat gtagaaaatg attttgaatt gttcaatagt aaaaaatatc aaattgtaga
    21841 attgaatgaa acgaaccttc ttgtgacttt tgaagaagat ttacatcaac ctaaagtgcg
    21901 cgtcaatgat caaactgtga agaaacttgt gattaaagtt ttgaactaag aggaggaaaa
    21961 tgtgcaaatg tgcgttaaac taggcggtgc gcatcatttt tatctttgcg ttcatcttca
    22021 atatctagaa agtaaaaggc tcgttgaatt atgagccttt tattttttct agtgcgcccg
    22081 gcatgggtaa caccttgacg gtgaaagtcc attacaggct tggtagtatg aactgttagc
    22141 caaagacaag tcatgtaact tatattaaaa tgtttgtgaa ttagctattc tcctttcttc
    22201 tatacttcaa ttaatgataa actgtatagg taaaacttgt acattcttta ttaaagtgaa
    22261 tgacgattga aagttaggat taatgaggaa aaggagttcc acctttggat atttatcaac
    22321 attttagacc tgaagaacat gaacaaattg attatttatt agataaagtg cgccaggctg
    22381 aaacacaata tgccccagta ctgacgtatt ttttagatcc tcgtggacaa tatatgttag
    22441 aagtgatagc aggcagtttc aacgatttgc acgtttcatt tgatggggga cgtgatgcgg
    22501 agaggtgtcg ggcggttatt gcgccaagct attatgaacc gtcgcgggat gactttgaat
    22561 tggctttaat tgaaattgat tatccgacaa agtttgtgac attgcaacat caacatgtgt
    22621 taggaacatt gatgtcttta ggtatagaac gtgaacaagt cggtgatatt atcgtagctg
    22681 aacgcatcca atttgttttg acaaagcaat tagaatcata tattatgtta gaattaacac
    22741 gtattaaagg ggcaacaatt aaacttcatg tgattccgtt tgaagatatg atacaatcag
    22801 aagagtattg ggagacgcat gaagcaacag tgagcgcaac aagactcgat gtcgtattaa
    22861 aggaaatgat tcggaagtca cgtacaattg ccaagacaca cattcagcga aaacgtgtca
    22921 aagtgaacca tacgcttatt gaggcagcgg attttcaact tgaagcaggc gatttgttgt
    22981 ccatacaagg atatggccgt gcaaagatta cagaaattgg tgatcgtacg aagaaagata
    23041 aattaagaat cacctatcaa actttattta aatagtgtat gatggaggag ggcaagaaat
    23101 ggcttttaca cctagcgaga ttaaaaacaa agcgttcaca cgtattaaaa acggcttcga
    23161 acctacagaa gtagaacaat atttagaaca gttaagccat gaaatcgaac gtttaaaaga
    23221 agataaaaaa caattagaaa aagtgttaga agaacgtgat gcacacattc aatcattcaa
    23281 agaggttgaa aaatcagtcg gtgaagcgat tgtcagtgcc caacgcgctg ccgatgaaac
    23341 aaaagcagca gcacaaaaag agcgagatgc aatcattcaa aaagcacaag cagaagcaag
    23401 tcaaattgtg aatgatggta tagaaaaggc gcgtcgttta tctttccaaa ccgaagatat
    23461 gaagcgtcaa tctaaagtgt tccgttcacg ttttagaatg cttgtagaag cacagcttga
    23521 cttgttgaaa agtgatgact gggaatactt gttaaactat gatttagatt ctcaacaagt
    23581 gacagaagaa aactttcaac atttaaatga acaagacatt acagcacaag agaaacaaca
    23641 agctgaacaa gcgaaccaac aaccaaacga aacatcatca agtgaaacag acaagtaaaa
    23701 gagataatca tccatacagc gagttaggaa gtggtgagag cctaacagat gaccttattt
    23761 tatatcactg attcgccgtg tcatattaaa atcaatgaga gaactctaag ctgagttaag
    23821 cagggtggta ccgcggcatg tccgtccctg aatatctgag cttagagttc tttttcagtt
    23881 aaaggagtgt agtttaaaat ggaatacaaa gatacgttac tcatgccaaa aacaaaattc
    23941 ccaatgcgcg gaggacttcc aacaaaggaa ccacaaattc aacaagagtg gaaagagaaa
    24001 gatttatacc gcaaaatgtt agaaaaaaat gaaggacaac cgtcatttat tttgcatgat
    24061 ggtccgccat acgcaaacgg taacttacat atgggacatg cgttgaataa aattttgaaa
    24121 gactttatca accgctacaa aacgatgcaa ggattttata caccttatgt tccgggttgg
    24181 gatacacacg gtttaccgat tgagcaagcg ttaacgaaaa aaggcgttaa acgtaaagaa
    24241 atgacaactg cagaatttcg tgataaatgt caagcttttg cgatggaaca aatcgatatt
    24301 cagaaaaaag acttcttacg tttaggggtt aacggcgatt ttgacaaccc atacattacg
    24361 ttaaaaccag aatacgaagc ggcacaaatt cgcttatttg gtgaaatggc tgacaaaggt
    24421 ttaatatata aagggaaaaa gccggtttac tggtcacctt caagtgaatc gtcattagca
    24481 gaagcggaaa tcgaatacca cgacaaacgt tcagcttcta tttatgtcgc atttgacgtg
    24541 aaagacagta aaggtatcgt tgcggatgat gcgaagttta tcatttggac aacaacacct
    24601 tggacattac cgtcaaacgt agccattaca gtgcatcccg aattgacata tgttcaaatg
    24661 aatgtggacg gtacacgtta cattatcgcc gaagcattag ttgatgcagt tgctgaacaa
    24721 ttaggttggg ataaagaagc tgttgttcgc gaaaaagatt tcaaaggttc agaattagaa
    24781 tatatcgaag cacaacatcc atttattgat cgtatttcat taatcatcaa tggtgagcat
    24841 gtcacaacag atgctggtac aggctgtgtg catacagcgc ctggacacgg tgaagatgac
    24901 tttatcgtag gtcaaaaata cggtttagaa gtcattagcc cattagatga taaaggggtt
    24961 ttcactgctg aaggtggccc atttgaaggt atgttttacg ataaagccaa ccaagctgtt
    25021 acagaattgt taactgaaaa aggtgcatta ctcaaattag actttattac gcatagttac
    25081 ccacatgact ggcgtacgaa aaaaccagtg attttcagag cgacaccaca atggtttgcg
    25141 tcgatttcta aagtgcgcca agacatttta gatgcgattg aagatacaaa gtttaaagtc
    25201 gactggggta aaacacgtat ttacaacatg attcgtgacc gtggcgaatg ggtcatctct
    25261 cgtcaacgtg tctggggtgt gccattgcca gtattctatg ctgaaaacgg cgacatcatt
    25321 atgacgaaag aaacggttta tcacgtagca gatttattcg aacaacacgg ctctaacatt
    25381 tggttcgaac gtgacgcgaa agacttatta ccagaaggct ttacacatcc gggtagccct
    25441 aacggtgaat ttacaaaaga acaagatatt atggacgtat ggttcgactc tggttcatca
    25501 catcgcggtg tccttgaaac acgtccagag ttaagtttcc cagcagatat gtatcttgaa
    25561 ggcagtgacc aatatcgtgg ttggttcaac tcttcaatta caacatccgt tgcgacgcgc
    25621 ggccgttcac catacaaaat gttattgtca cacggtttcg taatggacgg ggaaggtaag
    25681 aaaatgagta aatcattagg taacgtgatc gtgcctgata cgattgtgaa acaaaaaggt
    25741 gccgacattg cacgtttatg ggtgagctca gtggactacc ttgctgacgt acgtatctca
    25801 gacgaaattt taaaccaagt tgctgacgta taccgtaaaa tccgtaatac tttacgtttc
    25861 ttattaggta acatcaacga ctacaaccca gcaacagacc gaattgctga agcggattta
    25921 ttagaagtgg accgctatat cttaaatcgc ttacgtgaat ttacagcagg tacattagat
    25981 cattacgaat cattcgatta tttaaatatt taccaagagg ttcaaaactt tatcaacgtt
    26041 gaattaagta acttctattt agattatggt aaagatattc tttatattga agaaaaaaat
    26101 gcgcataaac gtcgtagtat gcaaacagta ttgttcgaaa ttttagtgaa tatgactaaa
    26161 ttacttgcgc caatcattcc gcataccgca gaagaagttt ggtcacatat cgaacaagtg
    26221 gacgaagaaa gtgttcattt aacaaatatg ccggctaaag aagaagtgga ccaagcgtta
    26281 ttagataaat ggaacacatt catggcttta cgtgatgacg tgaaccgtgc attagaagcg
    26341 gcaagaaatg aaaaagttat cggtaaatct ttagaagcta aagtgaaaat cggcaacagc
    26401 ccttcatttg atacgcttgc atttttagaa ggctttaatg atttacatca attgttcatc
    26461 gtgtctcaag ttgaattagt agaagataca aaaggtgaag catatcaaca cggtacaatc
    26521 gaaatcgcaa aagctgatgg agagaaatgt gcacgttgtt ggaattacag cgaatcatta
    26581 ggtagtgtgg gtgaattaga tgatttatgt ccacgctgtc aagaagtcgt aaaaacgtta
    26641 gtataatcga atcaataaaa tattaaagaa ggcaatgttg gtgctggcta agtgctaaca
    26701 ttgtcttttt tgtttgtgtg aaacatacat aactttgagt tacaaattac tccatttaaa
    26761 tcaatctttt gtaaacggtc caacactgta tcactgacaa ccctaggatg tatttcaaat
    26821 gtagttacc
//
LOCUS       DANHPA010000024        26766 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.024, whole genome shotgun sequence.
ACCESSION   DANHPA010000024 DANHPA010000000
VERSION     DANHPA010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 26766)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26766)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26766
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.024"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(106..1056)
                     /locus_tag="PTC28_000808"
     CDS             complement(106..1056)
                     /locus_tag="PTC28_000808"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HDK5716122.1"
                     /translation="MKTKGNKVVLVGNGAVGASYAFTMMSQGVADELVIIDINKDKVL
                     GDVLDLNHGAPYADSPVKVVAGEYSDCGDADLVVICAGAPQKVGETRLDLVEKNAKIY
                     KDIVTSIMDSGFDGIFLIAANPVDILTYVTLKYSGLPKHKVIGSGTILDTARFRHLIS
                     EAFDVAPASIHGYIIGEHGDSEVPVWSGATIAGVSIYEQLKNDPEKSHLIEDIYVNTR
                     DAAYDIIKAKGATYYGVAMGLMHISKAILKNQNIVLTVSSYLEGEYGHEGVYTGVPTV
                     INGDGASRVIETPLNDDEKEKFAKSVKILKDMQDSISHLF"
     gene            complement(1217..2041)
                     /locus_tag="PTC28_000809"
     CDS             complement(1217..2041)
                     /locus_tag="PTC28_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDK5716123.1"
                     /translation="MWKWETEGEAKGVIVIVHNMLEHTGRYAYVITHLKRNGYHVIMG
                     DLPGQGQTSRMNKGQIQSFEVYQERVLEWVEIAEEYHLPIFMIGVGLGGLICLNLLEK
                     VQLDIEGLILLSPLLAFQKHYKTRKNILASNIGDISKGTKFDIGIEAEVLTRNPEVQE
                     ETRNDPMMLKKVSYHWYKEVVRTMKDTADHLHKLTAKPMCVMYGTADQISDTEVTHQL
                     LHSLNLDEVYFKAWPLLAHEIHNEPEREAVMRYILSFLNNRVYAAGYLVEDENSLK"
     gene            complement(2184..2516)
                     /locus_tag="PTC28_000810"
     CDS             complement(2184..2516)
                     /locus_tag="PTC28_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716124.1"
                     /translation="MFRDMAFYIFGTQLDTFVQYFIFELIILVVIGLILGFLTKKIWP
                     VIVVIVGLNVIDVGILAQFNVSQGEGTFFGQLMLLLVAKFFPTFYEILLTVLLLRVDW
                     MRKIFKLV"
     gene            3002..3988
                     /locus_tag="PTC28_000811"
     CDS             3002..3988
                     /locus_tag="PTC28_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HDK5716125.1"
                     /translation="MALVKHFFIALSNNAFLNSAAKIIGPSLGANRVVAGNTIDDVIK
                     TIKRLNEKNISATVDNLGEFVNNERDAIEAKNNILKVMEAIHKHQLDAHMSVKLSQLG
                     SEFDRALAYRNIHQIVSKAQEYDHMHINIDTEKYDSLFDITQTLDRLKPEFNNVGTVI
                     QAYLFKADVLIDKYPDLRLRLVKGAYKESPYIAYQAKEEIDENYIRLIEKRLLTAKNF
                     TSIATHDHRIINHVKEFVKKHDIDKSKFEFQMLYGFRSELAEEIANEGYNFTIYVPFG
                     DDWFGYFMRRLAERPQNITLALKEFVKPKALISVAGATLGTLALFKILKRKP"
     gene            complement(4113..4580)
                     /locus_tag="PTC28_000812"
     CDS             complement(4113..4580)
                     /locus_tag="PTC28_000812"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HDK5716126.1"
                     /translation="MMKFEGQLNGKGLKIGVVVSRFNDLITGRLLDGAQDALRRHQVA
                     EDSIDVAYVPGAFELPIVAKKMAQTGKYDAVVTLGCVIRGATSHYDYVCNEAAKGIAK
                     ASDDTGVPVIFGVLTTENIEQAIERAGTKAGNKGAESAVGAIEMANLLRQMNA"
     gene            complement(4595..5776)
                     /locus_tag="PTC28_000813"
     CDS             complement(4595..5776)
                     /locus_tag="PTC28_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002490166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HDK5716127.1"
                     /translation="MQLDKIEEALEALKQGGTIIVVDDEDRENEGDLVAITEWMDENT
                     INFMATHGRGLICTPITAEIAQQAGLDNMVEHNRDPHGTAFTQSIDHVQSTTGISAFE
                     RTVTARALIDEKMTAETFHQPGHIFPLIAKKHGVLERRGHTEATIDLAKLTGARPAGV
                     ICEIMNDDGTMAKGEQLERFKAQHNLKMISIEDIVAYIKSQRTLISVEAKIKLPTQFG
                     EFDMYGFTSNIDGEEHLALVKGDIQPTMNVRVHSACATGDIFHSERCDCGQQLEASMA
                     YIQQHGGMLLYLPQEGRGIGLMNKLKAYELIEQGYDTVSANEALGFEPDLRDYDIAAQ
                     ILKHFNITTVNLLSNNPEKLLGLQRYGIQIGKRIPVITETNVHNHDYMQVKKLQMGHL
                     I"
     gene            complement(5790..6419)
                     /locus_tag="PTC28_000814"
     CDS             complement(5790..6419)
                     /locus_tag="PTC28_000814"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HDK5716128.1"
                     /translation="MFTGIVEEVGTVQHIQKRNPTTALTIQCKKILDDMHIGDSISVN
                     GTCLTVTRFDQYSFTVDVIHGTENKTYLADLKTNDTVNLERALLATGRLGGHFVQGHV
                     DGKGVIQHIQTSQNEWIYTIKAEPCLIDQMIPQGSIAVDGISLTVFKKFRDCFDIHLI
                     PETRKATILADKKQGDPVHLETDMLFKYVQAITKEKSQLSVEELLNAGF"
     gene            complement(6424..7470)
                     /gene="ribD"
                     /locus_tag="PTC28_000815"
     CDS             complement(6424..7470)
                     /gene="ribD"
                     /locus_tag="PTC28_000815"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HDK5716129.1"
                     /translation="MNHYLDYAIQLAEMTQGQTGTNPAVGAVIVKHGRIIGFGAHLKK
                     GERHAEIQAIDMAGAKHVKGATIYVSLEPCSHYGSTPPCAQRIIDTGIAKVVYAAKDT
                     TLQETSHDVMVQHGIEVEYRPHPRAEQLYAAFYRSKEGAVPIVTVKVSASIDGKQATD
                     HFESQWITSKQVKADVFQLRHSHDAIITGNGTLTHDNPSLTTRVEDGHHPAKVILSRS
                     GKINWDAQLFQDHVTPIYIYTENQALTSSFDHVEIIQQTDIQIEDVLKDLYQKGYGHV
                     LVEAGPNVTSQFLASRLVTHFILYLAPKIIGGQGVNQFYQTPLVTPLNQLPQFEIVQT
                     DIIDTDLKLRMQRK"
     regulatory      complement(7616..7750)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            complement(7927..9495)
                     /locus_tag="PTC28_000816"
     CDS             complement(7927..9495)
                     /locus_tag="PTC28_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding protein"
                     /protein_id="HDK5716130.1"
                     /translation="MRVAIVGMGTAGVSVLRQLVKYKQFKKIEVDLYDNAYNMGQGEP
                     FQNDSEDFLINVPVDHLSLNVDNILEFREWYNEQDTFDYGDADYLPRYVFGHYMKSYL
                     EQFDTTFENVNVIKQEVTHMYIEEQESEITPKRIVVCTGNDVDSCQKYDYVFFTTGTM
                     SYNDPFDLKGLKGYIHSPYPANQTLAEVDDDDAVAIIGTGLASLDVVRHALSHHQRKP
                     IVMASRSGKLPSVRGTMQDITFQFLTLENFDALKAENMGVVPLEDAVALFKKEFEVRD
                     IPLEKLLKRRKYDAIRDLNYDLNHPEEVGALQSMFETLKENMNWIWNSLSREDQEQFI
                     NKYHRYMKENTNPMPRETAQLLVEEIKAGHLQVLSGLEHVRQFYGKYRLRFKNVHEEM
                     KMDVVINATGPKKHLSQLDDDDALLLDVANRQIVQAHPLGGIQIVPSTNEVISPLYGT
                     LNNMRAIGQMTNGVNFERNGVSMIIQQAVSAVENLYDTYKAKKALEKEARKQQKKAEE
                     KAKKKKTKKKKKKK"
     gene            complement(9913..11232)
                     /locus_tag="PTC28_000817"
     CDS             complement(9913..11232)
                     /locus_tag="PTC28_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HDK5716131.1"
                     /translation="MCNDISEILGIKVKNLKITQNLGLHVHKNVQALFYEGQLTYHPS
                     ACECCGIKNDNHLIIKHGFRKTNVYMGLIFERPAYLKLKKQRFYCKACQRTFTAETPY
                     IQPRCTISNEVKRMMTWKLSKVTSEKDIAESLCVSPSTVHRHLKVVSNSVKTHAHYVL
                     PEHLAFDEFKSTKDVEGAMSFIYCDSVTHDIIDILPDRRKHQLEAYFLKFSRKQREKV
                     KTVSIDMFPPYIALIQDLFPHAEIIIDRFHIVQAINREINRCRVQVMNGFRTKERPQY
                     NKLKRYWKLLLKAPIDLDRMIYQPYRLFKSWQSQYSLVQYLLNLDETLKETYETGHRL
                     LSALKANDIQQLRFILQDAKTKDTSKGLKRVIHTFIKYMPYISSTMRHRHLTNGPIEG
                     INNKIKLIKRVSYGYRNFWNFRNRILMISKVFVSEYKKRIKQQNNVA"
     gene            complement(11376..12239)
                     /locus_tag="PTC28_000818"
     CDS             complement(11376..12239)
                     /locus_tag="PTC28_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosaminidase"
                     /protein_id="HDK5716132.1"
                     /translation="MRKHKKGSILAVLASLMIAAAAGFFFFKMIEDQIFFKSVDQVER
                     VEKLDVTLKQASEKQIDNYTSQQVSNKDHTNWRDASDSEIRQAMDSSSFMDDKRQKYQ
                     FLELSKYQGIDKNRIKRMLRDHPTLLAHTDDFVNAAKAKQVNEVYLISHALLETGSVV
                     SELSNGVEIDGKKYYNFYGVGALDEAPVKTGAEYAKKKGWDTPEKAINGGAAFIHDHY
                     LSNPNQNTLYSMRWNPKNPGEHQYATDINWAKSNAVIMADFYKDMKTEGKYFNWYVYK
                     DDKKHQDGHNY"
     gene            complement(12396..12620)
                     /locus_tag="PTC28_000819"
     CDS             complement(12396..12620)
                     /locus_tag="PTC28_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716133.1"
                     /translation="MDYEHLNLEHFFARNDDLDIIRDRSEFVMINNMTKEMMYRDGDV
                     EGTINLARYYYKNRSQAASFIMMDYHREEK"
     gene            12752..13306
                     /locus_tag="PTC28_000820"
     CDS             12752..13306
                     /locus_tag="PTC28_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016425400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDK5716134.1"
                     /translation="MSQSFRYGITPLTGQIRKGVIDIIFDTLYAQYYKFIHFLLHQYQ
                     ISYNYDEYFQLLSIRLWELSMKYDATFNQSFKTYINYQLKYYLIDLLRSAHTPLTTTP
                     LDTSANQLKDMSTSHLNLMLEDIIRTLKPTHRTWFRFYLQGYQQKEIQQLMQVSATTV
                     RKYKIATFRQIKQVLTQDDLKKGF"
     gene            13309..13740
                     /locus_tag="PTC28_000821"
     CDS             13309..13740
                     /locus_tag="PTC28_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComK"
                     /protein_id="HDK5716135.1"
                     /translation="MTVTQPQYENILYIKSSESIGHQLVIQHLTHEQRSQMSMKQYID
                     QLAYQFQRDVRTQQKIASETLKVHQMIPIFLSKSLILCPLQSQRAAIQYYINVTHVIA
                     ASSHQQNTRIHFNNNLSLIVPMPLNQFVRKWKDAYLLTALM"
     gene            complement(13743..14192)
                     /locus_tag="PTC28_000822"
     CDS             complement(13743..14192)
                     /locus_tag="PTC28_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716136.1"
                     /translation="MRKDVFEYKVKKELWYLNRREKSALTQYFEKHRVETIQQQFSTP
                     RRFVNDYLQHEVFGTRIVSLGHLVTSLVGLLVSNILLLGLFITGLLLSLSAVNYFIQP
                     QVTLSIGTVIAVLFGAIVLMIGTVYLMKRVNAFFTKRLLLYKFNKVN"
     gene            complement(14360..15070)
                     /locus_tag="PTC28_000823"
     CDS             complement(14360..15070)
                     /locus_tag="PTC28_000823"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HDK5716137.1"
                     /translation="MADLKVRVFADGADIEQMKKAYQNKEVDGFTTNPSLMAKAGVKD
                     YIEFAKEAVEAIPDASISFEVFGDDMETMEKEAEIIQQFGENIFVKIPVVNTKGESMI
                     PLIKSLSAKGVKLNVTAVYTIEQVKEITEAVTAGVETYVSVFAGRIADTGVDPMPLMK
                     ESVEVTHSKEGVQLLWASCRELFNVIQADEIGADIITCPSDVVKKVSNIGRDINELSV
                     DTVQGFAKDIKSSGLSIL"
     gene            15223..15525
                     /locus_tag="PTC28_000824"
     CDS             15223..15525
                     /locus_tag="PTC28_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716138.1"
                     /translation="MSKSKKYFYLSVLLMLISLYFNTLNPLLNAHFTSIIKLIFVCSV
                     VNCLILLIAIRFADKSIKHLPERRNWIHKASKIQPLLLLIVLVVHLLASLYTFGII"
     gene            15558..15923
                     /gene="crcB"
                     /locus_tag="PTC28_000825"
     CDS             15558..15923
                     /gene="crcB"
                     /locus_tag="PTC28_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002488424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HDK5716139.1"
                     /translation="MKYILIFLGGCIGALLRWQTSFITIGYHLPIGTFIANLLGAFLM
                     GYFTVRLHHWNSSYPKLKLGLTTGFLGALTTFSTFQLELVTLAQQLDWFNLVIYGLCS
                     YCGGLICCYLGYKLGGEHA"
     gene            15920..16267
                     /gene="crcB"
                     /locus_tag="PTC28_000826"
     CDS             15920..16267
                     /gene="crcB"
                     /locus_tag="PTC28_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HDK5716140.1"
                     /translation="MTMLFVALGGGIGAVLRGFISAITSRYMNTSFPIATLIVNLIGS
                     FCIGYFNHFTLLSPELKLLIITGLLGGFTTFSTLTLELFQMLHSKTWGRFIWYSTGQY
                     IGCFVLCFIGMQL"
     gene            complement(16369..17205)
                     /locus_tag="PTC28_000827"
     CDS             complement(16369..17205)
                     /locus_tag="PTC28_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDK5716141.1"
                     /translation="MKHVTFYNGNQMPQVGLGVFRVENNDTAKEAVKHAIKSGYRSID
                     TAMIYQNEEKVGEGIREALAETDLTREDLFITSKLWLSDYGRENVVAAYQASLERLGL
                     DYLDLYLVHWPGLDEDVMIDTWRGMEELYHDQKVKNIGVSNFNVEHLDKLLATSRIKP
                     VINQVEFHPYLTQKRLRVYLEAQNIHMESWSPLMNAQILEDDTVKQVAAEVGKSPAQV
                     IIRWNLQHGVVTIPKSITPSRIEENLNVFDFELSLGQMEALDGLNEDRRIGPDPLHFD
                     GK"
     gene            complement(17347..18258)
                     /locus_tag="PTC28_000828"
     CDS             complement(17347..18258)
                     /locus_tag="PTC28_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NERD domain-containing protein"
                     /protein_id="HDK5716142.1"
                     /translation="MTQFGPMEIGLIAAIVVAALFFILFLVALKSKKKAKETYANQYQ
                     TKQEKLTHEHQEELEKVRIDKKKAETRHKEEYETMVSSKNREIDALKLFSKNHSEYVT
                     DMRLLTIRERLVKEKRIRPEDMHIMANIFLPTNDLEDITRVSHLVLTRTGLYVIDSEL
                     LKGHVYQGISQQQFSDNPMMEQVFKTLDLSPKTPQTVVLDQSDASHNALSIVDYTDRL
                     AHVEALAVKLQHELDLKYTPTPILYFNPRHEDDVTISNYASQGVTKVLVGPEQLNEFF
                     NRFVFHGRIQYDVNDLQNIMDEIESFN"
     gene            complement(18346..19545)
                     /locus_tag="PTC28_000829"
     CDS             complement(18346..19545)
                     /locus_tag="PTC28_000829"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HDK5716143.1"
                     /translation="MTYNRRLFTSESVTEGHPDKIADQISDAILDEILKGDPNARVAC
                     ETTVTTGMALIVGEITTSTYVDIPKVVRETVKEIGYTRAKYGYDYKTMSVLTAIDEQS
                     PDIAQGVDRALEYREAGNEEVLNTGAGDQGLMFGFATNETDTFMPLPIDLSHKLSKRL
                     SEVRKNGTLDYLRPDGKVQVTVEYDENDQPKRIDTIVISTQHHEEIELEKIQNDIKAC
                     VIYPTVDEQLLDEETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFS
                     GKDPTKVDRSAAYAARYVAKNIVAAQFADKCEVQLAYAIGVAQPVSIAIDTFGTGNVS
                     ENILIEAVRQNFDLRPAGIIQMLDLQKPIYKQTAAYGHFGRNDVQLPWERTDKVEVLQ
                     ETVNTLK"
     regulatory      complement(19650..19761)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            20009..21589
                     /gene="pckA"
                     /locus_tag="PTC28_000830"
     CDS             20009..21589
                     /gene="pckA"
                     /locus_tag="PTC28_000830"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HDK5716144.1"
                     /translation="MSFDKHAIETVANKPSSHFQLTTTELYNKILKRNEAELTELGAI
                     NAKTGEYTGRSPKDKFIVDNPQVKDDIDWGSINQPISEEKFLNLYEKVVEYLDERDEL
                     FVFNGYAGSDQESQLKLTVINEFAWHNLFAQNLFIKPTSKEEAAKIKADFTIISAPRF
                     KADPEVDGTRSETFVIISFKHKIILIGGTEYAGEMKKSVFSIMNYLLPQQGIMSMHCS
                     ANVGDKGDVALFFGLSGTGKTTLSADPNRKLIGDDEHGWNENGVFNIEGGCYAKAINL
                     SAEKEPQIFEAIRYGTVLENLVVDEQGYIDFDDNKYTENTRAAYPINYIDNIVLPSKA
                     SHPNTIIFLTADAFGVLPPISKLDKDQAMYHFLSGFTSKLAGTERGITEPQPSFSTCF
                     GAPFLPLRAEVYAELLGDLIDKHDVDVYLVNTGWTGGQYGVGNRIQLKYTRKMVNDAI
                     NGKLKTATFEKDDIFGLSIPTKIEDVPTTILQPKNAWTDPTAYEEQAQNLVSRFKENF
                     KKFGEDAQQLEAAGGFKG"
     gene            complement(21987..22763)
                     /locus_tag="PTC28_000831"
     CDS             complement(21987..22763)
                     /locus_tag="PTC28_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HDK5716145.1"
                     /translation="MAFIKNKTMPVFLESHKVEEWTYEVNGLHVKGLNVAPHQPVKRI
                     VIYLRGGKGQVGRVRLARLLQFITLDTLVFAPYYRGNNGSEGNDDFAGADLADVTVAA
                     DMLKARYPQASLHLVGFSRGGIQGLLTFQTVEADSYIIWGGVTDLHLMYEERVDLRGM
                     LRRMIGHPKKDIAAYESRNALKDIYAGVPPILIIHGGKDVQVGIHQAYFLEQHLKNVG
                     ARFDTLYQMDEGHVPRPPAMKHVLARIQQWMTDIETGTKF"
     gene            complement(22744..23214)
                     /gene="ytkD"
                     /locus_tag="PTC28_000832"
     CDS             complement(22744..23214)
                     /gene="ytkD"
                     /locus_tag="PTC28_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphatase YtkD"
                     /protein_id="HDK5716146.1"
                     /translation="MKFTDENQQTVILTFKNDADEKDGGHVLALPIYEQQLVLTHHQQ
                     RGIEFPGGKREVGESSIEALTRELYEETGAIAEHIYYIAQYEVQGEQDCFKKDVYVVI
                     VNAIDRNVHYHETMGPILTHSIEAIDEADKSYLLKDPAILQCVERMSVLGFYQE"
     gene            23273..23524
                     /gene="yidD"
                     /locus_tag="PTC28_000833"
     CDS             23273..23524
                     /gene="yidD"
                     /locus_tag="PTC28_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HDK5716147.1"
                     /translation="MKTLFIYAIRFYQRFISPLTPPSCRFYPTCSNYTLEAIQVHGAL
                     KGSWLGLKRILKCHPFHKGGFDPVPLKKSSHHHSGNNKD"
     gene            complement(23500..24486)
                     /gene="menC"
                     /locus_tag="PTC28_000834"
     CDS             complement(23500..24486)
                     /gene="menC"
                     /locus_tag="PTC28_000834"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HDK5716148.1"
                     /translation="MELTDMQFYLYEPSFIHPIRTPKVTMTHRKTLFVKWTDEKQQSW
                     FGECNAFDTAWYYHETINDVMHVLKVWFEGVRGLDLVSFEEAKQCVATLNPYPAARAT
                     VMMALYQMFHSLESFHVPMTLTINGDFTERLMRLDGVGRIKIKWTSQMIEQVKMLATM
                     YPDIPISTDANQTLTATDTKMLERLKPYLAFIEEPFETLDVEADYTGFPSIALDEQAT
                     CLTTIEQLTQNPHIKTVVLKPFRLGGIDRVLEAMQVLQSKGIHVVIGGMYECGLSRYF
                     TAWLSQWGDYAGDVTPEGFYFERDVTNNVGRLHDGQLYFEPPVVNQSLLLPL"
     gene            complement(24489..25892)
                     /gene="menE"
                     /locus_tag="PTC28_000835"
     CDS             complement(24489..25892)
                     /gene="menE"
                     /locus_tag="PTC28_000835"
                     /EC_number="6.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate--CoA ligase"
                     /protein_id="HDK5716149.1"
                     /translation="MEHWLVQQAKQHPNKIAIQTMNETITFQSLLDRAMLKGAQLKQL
                     QRTRLGLYLDNSLEAAILIHGAWLYDIEIALINNRLTPFEIDRQMASIGVDLIVSTAT
                     PQTFNTSTRVIQSDDLEMPSTDLNMAVDTFEFHPQKIASIMFTSGTTGPQKAVPQTFE
                     NHRMSAASCRESLGFAYDSKWLAVLPIYHISGLSILLRSVQYGFTVFLLEKFNTKTVV
                     ELFQTEGITHVSLVPITLMRLMEQGLDQPYHLEKVLLGGAKLDGQFIRQALDRQLPIY
                     NSFGMTETCSQFLTADPTMLQRNPNTVGHASSDIALKVVSPDANGHGELYVKGGNVMQ
                     GYLYPENMNHVFDEEGYFKTGDIASVDEHGDVVIYDRRKDLIISGGENIYPYEIESVA
                     KSHPFIADAMCTSITDSAWGQRPILYVVAKQWVSDMEAFLEARLAKYKLPVHIYFVRA
                     LPYTSTGKLQRRILNEG"
     gene            complement(26067..>26766)
                     /locus_tag="PTC28_000836"
     CDS             complement(26067..>26766)
                     /locus_tag="PTC28_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transcriptional antiterminator"
                     /protein_id="HDK5716150.1"
                     /translation="FIDAFERQTAIHFNDRAVFVELIQTLVKVVYYRQFFGYADRCNV
                     TGEMDKDINNWSKLTAQIMEQLSQTQQFQQKFRRPLSVSDLSEFAYAIQSLYVEHQTP
                     EHHMDIVVVTNISKVEQRILYTKLNDLLPIGHFQGPYSEREATLLSQNFDLCITTSTY
                     YNHPNCQTIHIHKYLTLKDYETLYQLKQYRLSLQQRKSEIFQIIDNEQLSKEEKFKYI
                     EQLYETKMRLQKEM"
BASE COUNT         8032 a         5512 c         4404 g         8818 t
ORIGIN      
        1 atgcatattt taaaaaaggt gagcattttt aacagcaaaa aacggcccta cactctataa
       61 aaagagatag gaccatttat aactctattc atttattatt tttcattaga aaaggtgaga
      121 gatagaatct tgcatatctt ttaaaatttt aacagattta gcaaattttt ctttttcatc
      181 gtcatttaat ggtgtttcaa tgacacgtga agcaccatcg ccattgatca ctgtcggcac
      241 gccagtgtac acaccttcat gaccgtattc accttctaag taactagaca ctgttaatac
      301 gatgttttga ttttttaaga tggcttttga aatatgcatt aatcccattg ccacaccgta
      361 gtatgttgca ccttttgctt taatgatgtc ataagctgca tcacgagtat tcacataaat
      421 atcttcaatt aaatgtgatt tttcagggtc gtttttcaat tgttcataaa ttgaaacacc
      481 tgcaattgtt gcgccagacc atactggcac ttcagaatca ccgtgttcac caatgatata
      541 accatgaata cttgcaggtg ctacatcgaa ggcttcacta attaaatgtc tgaaacgtgc
      601 tgtatctaaa attgttcctg aaccgataac tttgtgtttt ggtaagcctg agtattttaa
      661 agtaacgtaa gttaaaatat ctactgggtt ggctgcgatt aagaaaatac catcgaaacc
      721 gctatccata attgaagtca caatatcttt ataaattttt gcattttttt ctactaagtc
      781 taaacgtgtt tcgccaactt tttgaggcgc gcctgcacaa atcacaacta aatctgcatc
      841 accacagtca gagtattcac ctgctacgac tttaactggg gaatctgcat acggtgcacc
      901 atggtttaaa tctaatacat ctccaagcac tttatcttta ttgatatcaa taataaccag
      961 ttcatctgct acaccttgac tcatcattgt aaaggcatag cttgcaccca ctgcaccatt
     1021 acctactaat actactttat taccttttgt cttcatgaaa aacactctcc taactatgcc
     1081 aaatttgttc actatttatt acttgtgatt cttttcacat atataactta acacgttttc
     1141 catattcttt caatgataaa attttaggac aaacgaaaat taatcattta tcctatactt
     1201 tttgtatatt tttaacttat ttaagactat tttcatcttc aactaaatag cctgccgcat
     1261 acacccgatt gtttaaaaag cttaaaatat aacgcatgac agcttcacgt tcgggttcat
     1321 tatgaatctc atgtgcaaga agtggccacg ctttaaaata aacttcatct aaattcaatg
     1381 agtgcaataa ttggtgcgtc acttcagtat cagaaatctg atcagccgtt ccatacatga
     1441 cacacatcgg ttttgccgtt aatttatgaa gatggtcggc tgtgtctttc atggtacgta
     1501 caacttcttt ataccaatgg taactcactt tttttaacat catcgggtca tttcgtgttt
     1561 cttcttggac ttctggattg cgtgtcagta cctcagcttc aatgcctata tcaaactttg
     1621 tgccttttga aatgtcgcca atgttggatg ctaaaatatt tttacgagtt ttataatgtt
     1681 tttgaaatgc gagcagtggc gaaagtaaga ttaaaccttc gatatccaat tgcacttttt
     1741 ctaataaatt taaacaaatc aaaccaccta atccgacacc aatcataaaa ataggcaaat
     1801 gatattcttc agcaatttct acccattcca acacacgctc ttggtagact tcaaagcttt
     1861 ggatttgccc tttgttcata cgtgaagttt ggccttgtcc tggcaaatca cccataataa
     1921 catggtagcc attgcgtttt aaatgtgtaa taacataagc ataacgtcct gtatgttcta
     1981 acatgttatg tacaatgacg atgacccctt tagcctcacc ttcagtttcc catttccaca
     2041 tactacatta tccttccttt aattctatgt attataacat ctattatagc gtgacttccc
     2101 tactcatcgc gactaaaaac ataaaaatac acgtgaatcc ttcatgaccg agtgccacaa
     2161 ccttttcacg tgttgcattt attttataca agtttaaata ttttacgcat ccaatcgaca
     2221 cgtaataata gtacggttag taaaatttca taaaatgtag ggaaaaattt tgccactaag
     2281 agtaacatca attgtccaaa gaaagtgcct tcaccttggc ttacattgaa ttgtgctaaa
     2341 atgccgacgt cgatcacatt caaacctaca atgactacga taactggcca aattttcttt
     2401 gttaaaaaac ctaatattaa accgataacg accaatataa tcagttcaaa tataaaatac
     2461 tgcacaaatg tatctaactg cgtcccaaaa atgtagaatg ccatatctct aaacattacc
     2521 tatctccctc aaatcgtttt cactttattt tatcacgttt cacttgtctg ctatttaaag
     2581 atatcgtaaa gattcaggtc aatcatttac acaatgttaa tattcatgac agtcctttat
     2641 gatgtttaga ggaacttcac aatgatttca tcatagcttg acatgaacgt gctatattga
     2701 aaataaacaa agtcagatta aaggagttca tgatgaagct cgtttataaa tgtttgtttt
     2761 gcatcgtcct atttttatgt acaccactca tcacagcgat cgctcaagag ccgattacga
     2821 tagaagcaca ccattaatcc atatataatg aatactcttt ttataacctt ttttacattt
     2881 aattatgccg tcaccactca actttgtaaa attcgcacct ttttatatga aaacgttttc
     2941 ttcccttatc tcttcatgat acactgatat tacatcagaa acataatggg aggaattcgg
     3001 catggcctta gtcaaacact tttttatcgc attgtctaat aatgcatttt taaattcagc
     3061 agcgaaaatc attgggcctt cattaggggc aaacagagta gtcgcgggaa atacaattga
     3121 tgatgtgatt aaaacgatta aacgactgaa tgagaaaaat atttcagcta cagtagataa
     3181 tctcggtgaa tttgtgaata acgaacgaga tgctattgaa gcgaaaaata atatattaaa
     3241 agtgatggaa gcgattcata aacatcaatt agacgcacac atgtctgtca aactgagtca
     3301 actcggtagt gaatttgacc gtgcacttgc atatcgtaac attcatcaaa tcgtttctaa
     3361 agcgcaagaa tacgatcata tgcatatcaa cattgacacg gaaaaatatg atagcttatt
     3421 cgatattaca caaacattag accgtttaaa gcctgagttt aacaatgtgg gtaccgtcat
     3481 tcaagcttat ctattcaaag cagacgtatt gattgataaa tatccagact tacgcttacg
     3541 actcgttaaa ggggcttaca aagaatcacc atacattgca tatcaagcaa aagaagaaat
     3601 cgatgaaaat tatattcgct taattgaaaa acgtttattg actgcgaaaa actttacgtc
     3661 gattgcaaca catgatcatc gcattattaa tcatgtgaaa gaatttgtta aaaaacatga
     3721 tatcgataaa tcaaaatttg agttccaaat gctttatggc tttagatccg aactcgctga
     3781 agaaattgca aatgaaggtt acaactttac gatttatgtc ccatttggtg atgattggtt
     3841 cggttatttc atgcggcgtt tagcagaaag acctcaaaat atcacactag cgcttaaaga
     3901 gtttgtgaaa ccaaaagcgt taatttctgt tgcaggtgcc acgttaggca cacttgcgtt
     3961 atttaaaatt ttgaagcgta aaccttaaag ggtatcagca cataaataga aagcagggac
     4021 tgggatatta tgtcccagtc cttgtctttt taacttgggt ttaacggcat agacgctact
     4081 catctatttt aaatacacgt atttgatgtc gattaagcgt tcatttgtcg aagtaagttc
     4141 gccatttcaa tagcaccgac tgcagattct gcacctttat tgcctgcttt tgtacctgcg
     4201 cgctcaatcg cttgttcaat attttcagtc gtcaatacac caaaaataac tggcacgccc
     4261 gtatcatcac tcgctttcgc aatcccttta gccgcttcat tacagacata atcataatgc
     4321 gatgttgcac cacgaatgac acatcctaat gttacgacag catcatattt gcctgtttgt
     4381 gccatttttt tagcgacgat tggaagttca aaagcgcctg gtacgtaagc gacatctata
     4441 ctatcttctg ccacttgatg tcttctcaat gcatcttgag ccccatctaa taaacgtcct
     4501 gtaattaaat cattaaaacg actcaccaca actccaattt ttaaaccttt accatttaat
     4561 tgaccttcga atttcatcat acttcctcct ctatttatat taaatgaccc atttgtaatt
     4621 ttttcacttg catataatca tggttgtgca cattcgtttc agtgatgact gggatacgtt
     4681 taccaatttg aataccatag cgctgtaatc ctaataattt ttcagggtta ttgctcaata
     4741 gattaaccgt tgtaatatta aaatgcttta aaatttgcgc tgcaatgtca taatcacgta
     4801 aatccggctc aaatccaagt gcttcattcg ctgaaacagt atcatagcct tgttcaatta
     4861 attcgtaagc ttttagtttg ttcattaaac caatgccacg cccttcttga ggcaaataga
     4921 gcaacatgcc accgtgttgt tggatatacg ccattgacgc ctctaactgt tgaccacagt
     4981 cacatctttc actatgaaat atatcacctg tcgcacaagc ggaatggacg cggacattca
     5041 tcgtgggttg aatgtcacct ttgacgagcg ctaaatgttc ttctccgtca atatttgaag
     5101 taaaaccata catgtcaaat tcaccaaatt gggttggtaa tttaattttc gcttccactg
     5161 aaatcaatgt acgttgtgat ttaatatatg caacaatatc ttcaatcgaa atcattttca
     5221 agttgtgttg cgctttaaac cgctctaatt gttctccttt ggccatcgtc ccgtcatcat
     5281 tcataatttc acatatcaca ccggctggac gtgcccctgt taacttcgcc aaatcgattg
     5341 tcgcttcagt gtgcccccga cgttcgagga ccccatgctt tttagcgatt aacggaaaaa
     5401 tatgaccagg ttgatgaaat gtttcagcag tcattttttc atctatcagt gctctcgctg
     5461 ttactgttct ttcaaaagca ctaattcctg ttgttgattg cacatggtca atactttgtg
     5521 taaatgccgt accgtgggga tcgcgattgt gttcgaccat attatcaagt cccgcttgtt
     5581 gggcaatctc tgctgtaatt ggtgtacaaa tgaggcctct cccgtgggtc gccataaaat
     5641 taattgtgtt ttcatccatc cactctgtaa ttgcaacaag atcaccttca ttttcgcgat
     5701 cttcatcatc aacgacaata atcgtgccgc cttgtttcaa tgcttctaac gcttcttcaa
     5761 ttttgtctaa ttgcatgtaa cgcccctcct taaaaacctg cattcaataa ttcttctact
     5821 gacagctgtg atttttcctt tgtgatggct tggacatatt taaagagcat atctgtttct
     5881 aaatgcaccg gatcaccttg ttttttgtca gcaagaatgg ttgctttacg tgtttctgga
     5941 attaaatgaa tatcaaaaca atctctaaat tttttaaaaa ccgttagact gataccatca
     6001 acagcaatcg acccttgtgg aatcatttga tcgattagac acggttcagc tttaattgta
     6061 taaatccatt cattttggga tgtttgaatg tgttgaatca cgcctttacc gtcgacgtga
     6121 ccttgtacaa aatggccacc taacctccca gtagctaata atgcacgttc taaattaacg
     6181 gtatcattcg tttttaaatc tgctaaatag gttttatttt cagttccgtg aatgacatcg
     6241 actgtaaagc tatattgatc aaagcgcgtc acagtcagac atgtaccatt cacactaatc
     6301 gagtcgccta tgtgcatatc gtctaatatt tttttacatt gaattgtcag tgctgttgta
     6361 gggttacgtt tttgaatatg ttgaactgta ccgacctctt caacgatacc tgtgaacatg
     6421 tcgtcacttc ctttgcattc ggagtttcaa atcggtatct attatgtcag tttgtacaat
     6481 ttcaaattgt ggaagttggt ttaaaggggt caccaatgga gtttgataaa attgattcac
     6541 accttgacca cctatgattt tcggggctaa atataggatg aagtgcgtca ccaaacgaga
     6601 cgctaaaaat tgtgaagtta cattagggcc tgcttcgaca aggacatgac cataaccttt
     6661 ttgatataaa tctttgagca catcttcaat ttgaatgtcg gtttgctgaa ttatttcaac
     6721 atggtcgaat gatgaagtga gtgcttgatt ttcagtataa atataaatcg gtgtcacatg
     6781 atcttggaaa agttgtgcat cccagttgat tttgccggag cgcgataaaa tcactttcgc
     6841 tggatgatgt ccatcttcca cgcgtgtcgt taaacttgga ttatcatgtg ttagcgtgcc
     6901 atttccagtt attatcgcat catgagaatg tctcaattgg aaaacatctg cctttacttg
     6961 tttagaagta atccattgac tttcaaaatg atccgtcgct tgtttaccat ctatactggc
     7021 gctcacctta actgtcacaa tgggaacagc accttcttta ctgcgataaa aagcggcata
     7081 caattgctcg gcacgtggat gtggacgata ttccacctca ataccatgtt gcaccatcac
     7141 gtcatggctt gtttcttgta atgtggtatc tttggcagca taaacgactt tcgctatacc
     7201 agtgtcaatg atacgttgtg cacatggagg tgtactgccg tagtgtgaac acggttcaag
     7261 ggagacgtaa atcgtagcac ctttaacgtg tttagcaccg gccatatcaa tcgcttgaat
     7321 ttcagcatgg cgttcacctt tttttaaatg tgcaccaaaa ccgatgatac gcccatgttt
     7381 cacaatgacg gctcctactg ctggattcgt tccagtttgg ccttgtgtca tttctgccaa
     7441 ttgtatcgca tagtctaaat aatggttcat actttcacct caataaaaaa ccactcgatt
     7501 gtcgacttcg agtggtagga tgtatgaaaa gtgatcaaaa cacattgatt ctttttcatt
     7561 caaaatttgg atacgacaaa taaactcaca tattgtatgt gaaaaaatgt cgtcactatt
     7621 cttcctccca tccagacttt aactgtcggc tctagattct cactagatca gccatatcaa
     7681 atcaatgata cgggtcgcag gcttatattt tactgccggt tgggaatttc acccagcccc
     7741 gaaagaatat atgaaattgt attgagaata aaagatacac atggacctat caaaagtcca
     7801 tgcgtctata ttagcgtatc tttttaaaat ttacaattga ttaaacatca aatcttcagc
     7861 atcaccaatt aataatataa tgatttatca caacattaaa gctctctccg ccctaaaaca
     7921 gcgtctttat tttttcttct ttttcttctt cgtttttttc ttttttgctt tttcttccgc
     7981 tttcttttgt tgtttgcgcg cttctttttc tagagccttt tttgctttat aggtgtcata
     8041 taagttttct accgcactga ctgcctgttg aataatcatg ctcacgccat tacgttcaaa
     8101 gttaacaccg tttgtcattt gtccaattgc acgcatgttg ttgagtgtac catataacgg
     8161 actaatgact tcattcgttg atggcacgat ttggatccca ccaagaggat gtgcctggac
     8221 gatttgacga ttcgccacat ctagaagtaa tgcatcgtca tcatctaatt gactcaaatg
     8281 ttttttcgga cccgtcgcat taatgactac atccattttc atttcttcat gaacattttt
     8341 aaagcgcaaa cggtatttac cgtaaaattg acgcacatgc tccaaaccag acaacacttg
     8401 taaatggcca gctttgattt cttccaccaa caattgtgct gtttctctag gcattggatt
     8461 tgtattctct ttcatgtagc ggtggtattt gttgataaat tgttcttggt cttcacgact
     8521 taaactattc caaatccaat tcatattttc ttttaacgtt tcaaacatac tttgtaatgc
     8581 accgacttct tctggatgat tcaaatcata attcaagtca cgaatcgcat catatttacg
     8641 acgtttcaat aatttttcta atggtatatc tcgtacttca aattcttttt taaacaatgc
     8701 tacagcgtct tctaatggaa cgacgcccat gttttctgcc ttcagcgcat caaaattttc
     8761 caatgttaaa aattgaaagg taatatcctg catcgttcca cgcacactcg gtaatttacc
     8821 actacgactc gccatcacaa tcggtttacg ctgatgatga cttaatgcgt gacgtacaac
     8881 atctaaactt gctaatcctg tcccaataat cgccacagca tcgtcatcat ctacttcagc
     8941 taacgtttga ttagcaggat aaggtgaatg aatgtaccct tttagtcctt ttaaatcaaa
     9001 tggatcgttg taagacatcg taccagtcgt aaagaacaca taatcatatt tttgacacga
     9061 atcgacatcg ttccctgtac atacgacaat acgtttagga gtaatttcac tttcttgctc
     9121 ttcaatatac atatgcgtca cttcttgttt gatgacattg acattttcaa atgttgtgtc
     9181 aaattgttct aaataacttt tcatatagtg accaaatacg tatctcggca aataatccgc
     9241 atcaccgtaa tcaaacgtat cttgttcgtt ataccattct ctaaattcta gaatgttatc
     9301 gacgtttaat gataaatgat caacaggcac attaatcaaa aaatcttcac tatcattttg
     9361 aaaaggttct ccttgcccca tgttataagc attatcatat aaatctactt caatcttctt
     9421 aaattgctta tattttacga gctgtcgcaa aacgctcaca cctgctgttc ccattccaac
     9481 aatggctact ctcattttgc accatcctta ctctaatttg tacattgctt ctctattata
     9541 ccctgaatga tacctattaa ttaatcattt tacattttac tatcgtattg gtcctgttcg
     9601 agtcattaat gatgtacaaa atttgagcag taagaatcgt aaacgtcaca catttacttt
     9661 gattacaatt cacacgcata gtacacttga gacataaagg agtgcgtact atgttaaaaa
     9721 tgattgtcaa agtgattatt tcaacagtca tcttattttt tgtactcggt cgtaacaata
     9781 aagctgagta atctcgtatt tatgcagcaa taaaaaaggt tgagtcgttc acatgaatac
     9841 cgtgacaact caaccttttc gttcaatatt aatcggttct ttgtcaacgt cggttggtga
     9901 gacgataacg cattaagcaa cgttattttg ttgtttaatg cgttttttat attcacttac
     9961 aaatacctta gaaatcatta agatacgatt cctaaaattc cagaaatttc tataaccata
    10021 agaaacacgt ttaatcagtt ttattttatt attaatccct tcaatgggtc cattcgttaa
    10081 atgtcgatga cgcatagtac ttgagatata aggcatatat ttgatgaatg tgtggatgac
    10141 acgcttgagc cctttcgaag tatcttttgt ctttgcatcc tgtaagatga accgtagttg
    10201 ctggatatcg tttgctttca aagcacttaa aagacggtgt cctgtttcat atgtctcttt
    10261 gagcgtctca tcaagattta acaggtattg aactaaactg tactggctct gccatgactt
    10321 aaaaagtctg tatggctgat atatcattcg atctaaatca atgggcgctt ttaatagtaa
    10381 cttccaataa cgctttaatt tattatattg aggtcgctct tttgtcctaa aaccattcat
    10441 gacttgaaca cggcagcgat tgatttcacg attgatggct tgtacgatat gaaagcgatc
    10501 gataatgatt tccgcatgag gaaataaatc ctgaatcaga gcgatataag gtggaaacat
    10561 atctatagag accgttttta ctttttcacg ttgttttcta gagaacttta aaaaataagc
    10621 ttctaattga tgtttgcgac gatcaggtaa aatatcaatg atatcatgag tcacactatc
    10681 acagtaaata aagctcattg caccttcgac atctttcgtc gacttgaatt cgtcaaaagc
    10741 taagtgctca ggtaaaacgt aatgtgcgtg tgtcttcacc gaattactta ctacttttaa
    10801 atggcgatgg acagttgaag gcgatacaca tagactttca gcgatatctt tttcagatgt
    10861 aacttttgat agtttccagg tcatcatgcg tttgacctca tttgagatgg tacatcgggg
    10921 ttgaatatag ggcgtttcag ctgtaaaggt tcgttggcaa gctttacagt aaaagcgctg
    10981 tttcttcaat tttaaatagg caggtctttc aaaaattaac cccatataaa cattcgtttt
    11041 acgaaagcca tgtttaataa ttaaatggtt atcattttta attccacaac actcacaagc
    11101 actgggatga taagtcaatt gaccttcata gaataatgcc tgtacgtttt tatgaacatg
    11161 taatcctaaa ttttgagtga tttttaaatt tttaacttta attcctagta tttctgatat
    11221 atcattacac ataggcacaa tatctcctta atcgttggtt tggtcactta caattataga
    11281 gatatttgtg cttttttaat atcaaaaatt aaaataacgg tcagtgaatc tctcaccaac
    11341 cgttaaaaat atataaccta ttaatcaaaa tggatttaat agttatgacc atcttgatgc
    11401 tttttatcat ctttgtatac gtaccagtta aaatatttac cttccgtttt catatcttta
    11461 tagaaatccg ccataatcac cgcattactt ttagcccagt taatgtctgt agcatattgg
    11521 tgttcaccag gatttttagg attccaacgc atactatata atgtgttttg gtttgggtta
    11581 gataagtagt ggtcgtgaat aaacgctgca ccaccattaa tggctttttc tggtgtatcc
    11641 caaccctttt tcttcgcata ttctgcaccg gttttaacag gcgcttcatc taatgcaccg
    11701 acaccataaa agttataata ttttttcccg tcaatttcca caccattcga caattcagaa
    11761 acgactgagc ctgtctctaa aagcgcatgt gaaatcaaat acacttcatt aacttgtttg
    11821 gctttcgccg cattcacaaa atcatccgta tgtgctaaca atgtcggatg atctcgtaac
    11881 atccgtttaa ttctgttttt atcaatacct tgatactttg acaattctaa aaattgatat
    11941 ttctgccgct tgtcatccat aaaagatgaa ctatccatcg cttgacgaat ttcagaatct
    12001 gaagcgtcac gccaattggt atggtcttta tttgaaactt gctggcttgt gtagttatca
    12061 atttgctttt cagatgcttg ttttaacgtc acatctaact tttcaacacg ttcaacttgg
    12121 tcaacacttt taaagaatat ttgatcttca atcatcttga aaaagaaaaa acctgcagct
    12181 gcagcaatca ttaaagatgc aaggacagca aggatggaac ctttcttgtg ctttctcata
    12241 aacacacctc ttcagaatgt ttcatattgt tacataaatt aaatttactc gcttgacttc
    12301 aaattttacc accttacacg actctgtaca attggtttca tctcttgtta caaattcata
    12361 aaaaaatagt aatgaatatg taaactaatc cattactatt tttcttcacg gtggtaatcc
    12421 atcataatga aacttgctgc ttgagaacga tttttatagt aatagcgtgc aaggttaatc
    12481 gttccttcta catcaccgtc acgatacatc atttcttttg tcatgttatt aatcataacg
    12541 aactctgaac gatctctaat gatgtccaaa tcgtcattac gcgcaaagaa atgctctaaa
    12601 tttaaatgtt cgtaatccat aatatcctcc tctatacatt tgtaatggtc gaaatgtctt
    12661 aattgcgtcc ttatacaccg tttcattaaa aaaatagcga taaaacagtg tctcattctt
    12721 gtattaaaca taaaatagca caaaaagtaa aatgtcacaa tcatttcgct atggtataac
    12781 tccattgacc ggtcaaatta gaaaaggagt gattgatatc atttttgata cactttatgc
    12841 tcaatactat aaattcatac attttttact acatcagtat caaatttcgt ataattatga
    12901 tgaatacttc caattgttgt cgatacggtt atgggaactt tcaatgaaat atgatgcgac
    12961 ttttaatcag tcttttaaaa cgtatatcaa ttatcaactg aaatattatt taatcgattt
    13021 attacgctcg gcacatacac cgttgacaac aacaccactg gatacatcag ccaatcaact
    13081 gaaagacatg tcgacatcac atttgaattt gatgcttgaa gatatcatac gaactttaaa
    13141 accgacacat cgcacttggt ttcgctttta tttgcaaggt tatcagcaaa aagagattca
    13201 acagctgatg caagtctcag ctaccacggt tcgtaaatat aaaattgcca ccttccgtca
    13261 gatcaaacaa gtattgacac aagatgattt aaagaaagga ttttagccat gactgtcacg
    13321 caaccacaat acgaaaacat actttatatt aaatcgtcag aatcaatagg acatcaattg
    13381 gttattcaac atctcacgca tgaacaacga agccaaatgt cgatgaaaca gtatattgac
    13441 caactggctt atcaatttca aagagatgta cgtacgcaac aaaaaattgc gagcgagacg
    13501 ttgaaagtac atcaaatgat cccgatattt ttgagcaaat cactgatact ttgtccactt
    13561 caatcacaac gcgcagccat tcaatattat attaatgtca cacacgttat cgccgcttcg
    13621 tcacatcagc aaaatacacg cattcatttt aacaacaact tgtcactcat tgtcccaatg
    13681 cctttaaatc aattcgttcg aaaatggaaa gacgcttatt tactcacagc actaatgtaa
    13741 ctttaattca ctttattaaa tttatacaac aacaatcttt tggtgaaaaa tgcgttgaca
    13801 cgtttcatca aataaaccgt cccgatcatt aatacaatcg caccgaataa aacagcgatc
    13861 acggtaccta tagataatgt cacttgaggt tggataaagt aattcaccgc acttaaactc
    13921 agtagcaagc cagtgataaa taaaccgagc aacaaaatat tcgaaacaag taagccgacc
    13981 aatgatgtaa ctaaatgacc caatgaaaca atacgtgtcc caaaaacttc atgttgcaaa
    14041 taatcattta caaaacggcg tggtgtcgaa aattgttgtt ggatggtttc aacacgatgc
    14101 ttttcaaaat attgtgttag cgcacttttt tctcggcgat tgagatacca taactctttc
    14161 ttcactttat actcaaatac gtcttttcgc atagtagact cctttatgtc ttttacttca
    14221 caaagcatag ctaaaattga gatgtattgc aagcgccatt caactcaaaa aagcacatgc
    14281 gtgcgggttt tgaaatctat cattgactcg atttcagccc acgcacatgt gcttttttgt
    14341 aaatgatgtc gttgtcaaat tataaaatgc taagacctga agatttgatg tctttagcga
    14401 aaccttgaac tgtgtctact gataattcat tgatgtcacg accgatgttt gatacttttt
    14461 taacaacatc tgaaggacaa gtaatgatgt ctgcaccaat ttcatcagct tggatgacgt
    14521 tgaataattc acgacagctt gcccataaaa gttgcacgcc ttccttgctg tgagtcactt
    14581 caactgattc tttcattagt ggcattgggt ctacacctgt gtcagcaata cgacctgcga
    14641 atactgatac atatgtttca acaccagcag ttacagcctc agtgatttct ttaacttgtt
    14701 caattgtgta tacagctgta acgttaagtt ttacgccttt agctgataag cttttgataa
    14761 gtggaatcat agactcccct ttagtgttca caacggggat tttaacgaag atgttctcac
    14821 caaattgttg gatgatttca gcttcttttt ccattgtttc catgtcgtca ccgaacactt
    14881 cgaatgagat agaagcatca ggaatcgctt caactgcttc tttagcaaat tcaatgtaat
    14941 cttttacgcc ggctttcgcc attaagcttg ggtttgtagt aaaaccgtct acctctttat
    15001 tttgatatgc tttcttcatt tgttcgatgt ctgcaccatc agcaaatacg cgtactttta
    15061 aatcagccat ttaattatgc ctccttgata tttttatcat actaaagtta taacattttt
    15121 tatgtcctca atgccatttt tacgcttaca aaatttttaa ccagatgtaa atgaattcaa
    15181 aaatatgata tgataacaag cgatatgaaa aggaggcata tgatgtctaa atctaagaaa
    15241 tacttttact tatccgtgtt gttaatgtta atcagtctct attttaatac gcttaatcca
    15301 ttacttaacg cacacttcac atctattatt aaactcattt ttgtatgtag tgtcgttaat
    15361 tgtttaatat tgttgatcgc cattcgtttt gccgacaaat ctattaaaca tttaccagag
    15421 cgtcgcaatt ggattcataa agcctcgaaa atacaaccat tattactact cattgtatta
    15481 gtggtccatc tacttgcttc actttacaca tttggcatca tttaaaatta agaaatttga
    15541 agagaaatgg tgatattttg aagtatattt taatcttttt aggtggctgc ataggtgcac
    15601 tattgagatg gcaaacgagc ttcataacaa ttggatatca tttaccgata ggcaccttca
    15661 ttgcaaattt gttaggtgcc tttttaatgg gctatttcac agtacgcctt catcattgga
    15721 attcaagcta tccgaaactt aaactaggac tcacaacagg atttttaggt gcattaacga
    15781 cattttccac ttttcaatta gaacttgtca cactggcaca acagttagac tggttcaatt
    15841 tagtcatata tggattatgt agctattgtg gcggcctcat ctgttgttac ttaggctaca
    15901 aattaggggg tgagcatgca tgaccatgtt attcgtggca ttaggcggtg gcatcggagc
    15961 tgtattacgc ggcttcatta gtgcgataac atcacgttat atgaacacat catttcctat
    16021 cgcgacgtta atcgttaatc ttatcggttc gttttgtatt ggttatttca atcacttcac
    16081 attgttatca cctgaattaa agctgttgat catcacaggt ttactcggtg gttttacaac
    16141 attttcaaca ttaactttgg aactatttca aatgttgcat tccaaaacgt ggggccgatt
    16201 catttggtat agcacaggcc aatatatcgg ctgttttgta ctctgtttca tcggcatgca
    16261 gttgtagcaa cttaaaatct tatgtataaa agttaaagga gctaggacat tacgtttcct
    16321 tagctccttt aatgtatcaa aaacctatat ttacaaaaac gttgacaatt acttaccatc
    16381 aaaatgtaat ggatcaggtc caatacgacg atcttcattc aatccatcta aagcttccat
    16441 ttggccaagc gataattcaa agtcaaatac gtttaaattc tcttcaatac gacttggtgt
    16501 gattgactta ggaattgtga caaccccatg ttgcaagttc caacgaataa tcacttgtgc
    16561 tggtgacttg ccaacttcag cagccacttg cttcacagta tcatcttcta aaatttgtgc
    16621 gttcattagt ggtgaccaag attccatatg gatattttgc gcttctaaat acacgcgtaa
    16681 acgtttttgc gttaaatatg gatggaattc cacttggtta atgaccggtt taatccgcga
    16741 agttgctaat aacttatcca aatgttccac attaaagtta cttacaccga tatttttcac
    16801 tttttgatcg tgatatagct cttccatccc tctccacgta tcaatcatga catcttcatc
    16861 taagcctggc caatgcacta aatacaaatc taagtagtcg agtcctaggc gctctaatga
    16921 agcctgatat gccgctacaa cattttcacg gccataatca gataaccata attttgacgt
    16981 aataaacaga tcttcgcgcg ttaaatcggt ttccgctaaa gcttcgcgaa tcccctcgcc
    17041 cactttttct tcattttggt aaatcatcgc agtatcaata ctacgatagc cacttttaat
    17101 cgcatgttta accgcttctt ttgcagtatc attgttttca actcgaaaga cacctaaacc
    17161 cacttgcggc atttgattgc cattataaaa tgttacatgt ttcatatgtc atcgctcctt
    17221 tgtaatctaa ccttatcgta tcgaatcgtg acgtcattgc gcaatcaata caacctaaaa
    17281 tatagaatat cacccgcctc aacaacacaa aaagagccgg agatcacacc ccagccctaa
    17341 ttatatttaa ttaaatgatt caatttcgtc cataatattt tgtaaatcgt tcacatcata
    17401 ctgaatacgt ccatggaaca caaaacgatt gaaaaattca ttcaactgtt ccggacctac
    17461 taatactttt gtaacacctt gtgacgcata atttgaaatt gtgacatcat cttcatgacg
    17521 cggattgaaa tataaaatcg gtgttggtgt atatttcaaa tccagctcgt gttgtaactt
    17581 cacagctaaa gcttccacat gcgctaaacg gtctgtgtaa tcaacaattg acaatgcatt
    17641 gtgagacgcg tcgctttgat ctaacacaac ggtttgtggt gttttcgggc ttaagtccaa
    17701 tgtcttaaaa acttgttcca tcattggatt atcagaaaac tgctgttgac tgataccttg
    17761 ataaacatgg ccttttaaca attctgaatc aattacataa aggcctgtgc gtgttaaaac
    17821 aagatgactg acacgtgtaa tgtcttctaa atcatttgtt ggtaaaaaga tattcgccat
    17881 gatatgcata tcttctggac ggattctctt ttctttgact aaacgctcac gaatggtaag
    17941 caaacgcata tcagtcacat attcactatg atttttagag aacagtttca gtgcatcgat
    18001 ttctctgttt ttagaagata ccattgtttc gtattcttct ttatgacgtg tttcagcttt
    18061 tttcttgtcg atgcggactt tttcaagttc ttcttgatgt tcgtgtgtta atttctcttg
    18121 ttttgtttga tattgattcg cataagtttc tttcgccttc ttcttgcttt tcaatgccac
    18181 taaaaacaaa ataaagaata atgctgctac aacaatcgca gcaatgaggc cgatttccat
    18241 tggaccaaat tgtgtcatga gcaatacctt cctttatcac ttttctacag ttatttctat
    18301 tatattaaat aactataaaa ttagcgatag ttatcatcaa gaattttatt ttaatgtatt
    18361 cactgtttct tgtaaaactt caactttatc tgtacgttcc catggcaatt gcacatcgtt
    18421 acgaccgaag tgaccgtacg ccgcagtttg tttataaatc ggcttttgta aatctaacat
    18481 ttgaataata cctgctgggc gtaaatcaaa gttttgtctt accgcttcga ttaatatatt
    18541 ttcgcttaca ttaccagtac caaatgtatc aatagcaatc gaaacaggtt gtgctacccc
    18601 aattgcatat gccaattgga cttcgcattt atcagcgaac tgagctgcta caatattttt
    18661 agccacataa cgtgccgcat acgcagctga acggtctact tttgtcggat ccttaccaga
    18721 aaatgcacca ccgccgtgac gtgcataacc gccataagta tcaacaataa ttttacgtcc
    18781 tgtcaaacct gcgtcacctt gtggtccacc gataacgaaa cggcctgtag ggttgatgaa
    18841 aaattttgtt tcttcatcta ataattgttc atctacagtt ggataaatga cgcatgcttt
    18901 aatatcattt tggatttttt ctagttcaat ttcttcgtga tgctgtgttg aaatcacaat
    18961 cgtgtcaata cgtttcggtt gatcattttc atcatattcc actgtaactt gaactttacc
    19021 atctggacgc aaataatcta aagtaccgtt tttacgtact tctgataaac gttttgacaa
    19081 tttatgtgac aagtcaatcg gtaatggcat gaatgtatct gtttcattcg tcgcgaaacc
    19141 aaacattaag ccttggtcac cggcacctgt gtttaatact tcttcgtttc ctgcttcacg
    19201 gtattctaga gcacggtcca ccccttgtgc aatgtcaggt gattgttcat caatcgctgt
    19261 taacactgac atcgttttgt aatcataacc atatttcgca cgtgtataac caatttcttt
    19321 gacagtttca cgaacgactt ttggaatatc tacataagtt gacgtcgtga tttcaccaac
    19381 gattaaagcc atccctgtcg ttaccgtcgt ctcacaagct acacgcgcat tggggtctcc
    19441 ttttaaaatt tcatctaaaa ttgcgtctga aatttggtcg gcaattttgt ctggatgccc
    19501 ttcagtaact gattctgaag tgaataaacg tctgttataa gtcataataa actccttttt
    19561 gtatgtatta cgaacattct ctatctgagc tcaataaaaa agagcctttc aacactataa
    19621 aatagagtga aggctctaac gtccattcgc tcttatcgtt cagactagta ttgtgtctgc
    19681 aaacggtttg gcacctttct tcgttaaaag aggttgctgg gtttcattgg gtccatgtcc
    19741 ctccaccact caggataaga gaatccgtta aaatcatatt acaaaacttt attaccgatg
    19801 tcaatttcat cttactgggc ttttcaaaat gatgtttgaa gcacctttat cctttgcatt
    19861 tgtttttcta ctttggtgta acattacttt actttcttta ttttatctta atttttttct
    19921 taattgagta gggattattt aacgaatatg ttatactctt gaattgtaaa ggcttacatt
    19981 gacgaaatta ctttggaggg atattatcat gtcattcgac aaacatgcga ttgaaacagt
    20041 agctaacaag ccgagttcac attttcaact cacaacgact gaattgtaca acaaaatttt
    20101 aaagagaaat gaagccgaac tgacagaatt aggtgcaatc aacgcgaaaa ctggggagta
    20161 tacgggacgt tctccaaaag ataaattcat tgttgacaat ccacaagtta aagacgacat
    20221 cgattggggt tctatcaacc aaccgatttc agaagaaaaa ttcttgaatc tttatgaaaa
    20281 agttgtggag tacttagatg aaagagatga gttgttcgta ttcaatggtt atgcaggtag
    20341 cgaccaagaa tcacaactga aactcacagt tatcaacgaa tttgcatggc ataatctatt
    20401 tgctcaaaac ttatttatta agccaacttc aaaagaagaa gcagcaaaaa ttaaagcaga
    20461 cttcacgatt atttctgcac cacgctttaa agcagatcct gaagtggatg gcacacgttc
    20521 tgaaacattt gtcatcattt cattcaaaca taaaatcatt ttaatcggtg gtacagaata
    20581 cgctggggaa atgaaaaaat ctgtgttctc cattatgaac tatttattgc cacaacaagg
    20641 tattatgagt atgcactgct ctgccaatgt aggtgataaa ggtgacgtcg cattattctt
    20701 tggtctttct ggtacaggaa aaacaacact ttcagcagac ccgaatcgta aattgattgg
    20761 tgatgatgag cacggttgga atgaaaatgg tgtctttaat attgaaggcg gttgctatgc
    20821 gaaagccatc aatctctctg cagaaaaaga gccacaaatt tttgaagcca tccgttacgg
    20881 aacagtgtta gaaaacttag tcgttgatga acagggttac attgattttg atgacaacaa
    20941 atatactgaa aatacgcgtg ccgcatatcc tatcaactat atcgataaca ttgtgttacc
    21001 ttccaaagca tcacatccaa atacgattat tttcttaaca gctgatgcgt tcggcgtcct
    21061 gccaccgatt tcgaaattag ataaagatca agcgatgtat cattttttaa gtggtttcac
    21121 atctaagtta gcaggtacag aacgtggtat aacagagcca caaccatcat tctcaacatg
    21181 ttttggcgca ccattcttac cgttacgtgc agaagtctac gctgaattgt tgggtgactt
    21241 aatcgacaaa cacgacgtag atgtttacct tgtcaacaca ggttggacag gtggacaata
    21301 tggtgtcggt aaccgtatcc aattaaaata cactcgtaaa atggtaaatg acgcgattaa
    21361 cggtaaatta aaaacagcta catttgaaaa agatgacatt tttggtttat cgattccaac
    21421 taaaattgaa gatgtcccaa caacgatttt acaacctaaa aatgcatgga cagacccaac
    21481 tgcatacgaa gaacaagcac aaaaccttgt cagtcgcttt aaagaaaact tcaaaaaatt
    21541 tggcgaagat gcacaacaat tagaagcagc cggtggattt aaaggttaat ccatcgcatt
    21601 atattaacaa agtagtgtct attttttgtt cgacaagaga tgacactact ttttattagg
    21661 tttaaactga tcgtacctat atattcttat gaaacactga cgtgacctag aatattacaa
    21721 aaacttcttt ttgttacctc aaatgatagc agtctactca aataactcta gaatcaacaa
    21781 aagtaccaaa aagtcataat tgtaacctta cttataatat tactaaaaaa tgccaatgct
    21841 gttatcattc atgcatctta atttaatgtg ggcactcaaa ctttttaatc tttgagcaca
    21901 aaataaaaac gtcatgcgta tgccttttca aaatgagcgt acatttctaa cgttcatttc
    21961 gtgacataca catgacgtga tagtatttaa aatttcgtgc cagtttcgat gtccgtcatc
    22021 cattgttgaa tgcgcgctaa cacgtgtttc atggcaggtg gacgcgggac atgcccttca
    22081 tccatttgat ataaagtgtc aaaccgtgca ccgacatttt tcagatgctg ttctaaaaag
    22141 tacgcttgat gaatgcccac ttgtacatct ttgccaccat gaatgatcaa tatcggtggt
    22201 acacccgcat atatgtcttt caatgcattt cgtgactcgt aagccgcgat atctttttta
    22261 gggtggccaa tcattcttcg gagcatcccc cgtaaatcca cacgctcttc atacatcaaa
    22321 tgtaaatctg tcactccacc ccaaatgatg taactgtctg cttcaactgt ttgaaacgtt
    22381 aataatcctt ggataccgcc acgtgaaaag ccgaccagat gtaatgaagc ttggggataa
    22441 cgtgctttta acatgtctgc tgcgaccgta acatccgcca aatctgcacc tgcaaaatca
    22501 tcgttgcctt cactcccgtt attaccacga taatacggcg caaacactaa tgtatccagt
    22561 gtaataaatt gcaacaatct cgcaagacgc acacgaccga cttggccttt gccgccacgt
    22621 aaataaatga caatgcgttt cacaggctga tgcggtgcaa catttaatcc tttcacatgt
    22681 agcccattga cctcatacgt ccattcttct actttgtggc tttctaaaaa gactggcatt
    22741 gttttattct tgataaaagc caagtacgct catcctttca acacattgta aaatagcagg
    22801 atcctttaat aaataacttt tatccgcttc atctatcgcc tctatcgaat gcgttaaaat
    22861 tggacccatc gtttcatgat agtgtacatt gcgatctatc gcattaacga tgacgacata
    22921 aacatccttt ttaaaacaat cctgttcgcc ctggacttca tactgtgcaa tataataaat
    22981 atgttcagct atagcgcctg tttcttcata caactctcgc gttaatgctt ctatacttga
    23041 ttctcctact tcacgtttac cgcctggaaa ttcaatgccg cgttgttgat ggtgtgttaa
    23101 taccaattgt tgttcataaa tgggtaacgc tagcacatga cccccatctt tttcatcagc
    23161 atcattttta aacgttaaaa tgacagtttg ctgattttca tctgtaaact tcacgcccca
    23221 tacgcccttt ctttctgtgt tacaatatga ttgattgaag gaggattcga ctatgaaaac
    23281 actgtttatt tacgctatcc gtttttatca gcgtttcatt tcgccactga caccgccttc
    23341 gtgtcgtttt tatccaacat gttccaatta tacattagaa gcgatacaag ttcacggtgc
    23401 acttaaagga agttggctcg gtttgaaacg cattttaaaa tgtcatccgt ttcataaagg
    23461 tggctttgat cctgtaccat taaaaaaatc atctcatcat catagcggta ataataaaga
    23521 ctgattcact acgggcggtt cgaaatataa ctgtccgtcg tgcaaccgtc ctacattgtt
    23581 tgtcacatct cgttcaaagt aaaatccttc cggggtcaca tctcctgcat aatcgcccca
    23641 ttgactaagc caagctgtaa aatatcgact taacccacat tcatacattc cgccaataac
    23701 gacatgaatc cctttgcttt gcaacacttg cattgcttct aacacacgat ctatcccacc
    23761 taaacgaaat ggtttgagta cgacggtttt gatatgcggg ttttgggtga gctgttcgat
    23821 tgttgtaaga cacgtcgcct gttcatcgag tgcaatcgat ggaaaaccag tataatccgc
    23881 ttcgacatcc aatgtttcaa atggctcttc aataaacgca agatacggtt ttaatcgctc
    23941 taacattttg gtatctgtcg ctgttaacgt ttgattcgca tcggttgaaa tcggaatatc
    24001 cggatacatc gtcgctaaca ttttcacttg ttctatcatt tgtgatgtcc atttaatttt
    24061 aatccggcct acaccatcga gtcgcatcaa gcgttccgta aagtcaccat taatcgtcag
    24121 cgtcattggc acgtgaaatg attcgaggct gtgaaacatt tggtacaacg ccatcatcac
    24181 tgtggcacga gcagctgggt atggatttaa cgttgccaca cactgtttcg cctcttcaaa
    24241 tgacactaga tcaaggccac gtacaccttc aaaccacacc tttaagacat gcatcacatc
    24301 gtttatcgtc tcgtgataat accaagctgt gtcgaacgca ttacactccc caaaccatga
    24361 ttgctgcttt tcatccgtcc atttcacaaa caatgttttt cgatgtgtca ttgtcacttt
    24421 cggcgtacga atcggatgga taaatgacgg ttcataaaga taaaattgca tgtcagttaa
    24481 ttccatggtc atccctcatt taatatccgt ctttgaagtt ttccagtact tgtataaggt
    24541 aaggccctca caaaataaat atgcacaggt aatttatatt tcgctaaacg ggcttcaaga
    24601 aacgcttcca tatctgacac ccattgcttt gcgacaacgt ataaaatcgg acgttgcccc
    24661 catgccgagt ccgtgatact tgtacacatc gcatcagcaa tgaacggatg tgattttgcg
    24721 acagactcaa tttcataagg ataaatattc tctccgccac taataattaa atctttacga
    24781 cggtcataaa tcacaacgtc tccatgttca tcgacactcg caatatcccc agttttgaaa
    24841 tagccctctt catcaaacac atggttcata ttttcaggat acaaataacc ttgcatcacg
    24901 ttgccccctt taacatagag ttcgccgtga ccattggcat ctggtgaaac aactttaagt
    24961 gcaatatccg aactggcatg acctactgta ttcggattgc gttgtaacat cgtcggatca
    25021 gcagttaaaa attgtgaaca cgtttccgtc atcccgaacg aattataaat aggtaattgt
    25081 cggtctaacg cttgacgaat aaactgcccg tcgagctttg cgccacctaa cagaactttt
    25141 tctaaatggt aaggttgatc caaaccttgt tccatcagac gcattaacgt aattgggact
    25201 aacgatacgt gggtaatccc ttcagtttga aacagttcca ccacagtttt cgtattgaat
    25261 ttttcgagta aaaagactgt aaatccatat tgaacgcttc tcaataaaat acttaaccct
    25321 gaaatatgat aaatcggcaa gactgctagc catttggaat cataagcgaa acctaaactt
    25381 tcccgacatg acgccgcgct catacgatgg ttttcaaacg tctgcggtac tgctttttgc
    25441 gggccagtcg tcccagatgt aaacataatc gaagcaatct tttgtggatg aaattcaaat
    25501 gtatctactg ccatatttaa gtctgttgat ggcatttcaa gatcatcaga ttgtatgaca
    25561 cgggttgatg tattaaatgt ttgtggcgtt gctgtactca caattaaatc gacaccaatc
    25621 gacgccattt gacgatcaat ttcaaatggc gttaagcgat tattgatgag tgcgatttcg
    25681 atatcataca accatgcacc gtgaattaaa attgctgctt ccaatgaatt atctaaatat
    25741 aaaccgaggc gcgtacgttg taactgtttg agttgtgcgc cttttaacat tgctcggtcc
    25801 aataacgatt gaaatgtgat tgtttcattc atcgtctgga ttgcgatctt gtttggatgc
    25861 tgtttggctt gttgaacgag ccagtgttcc atatgtgtcc ccccaaaaac aaagattcat
    25921 tatatctatt atagacctta tcttataaac ttgcatcgta taaaattgaa cgatcaaatt
    25981 gacaaaaaaa caacgatgct tcaccacttg agtaaagtcg ttgttcacaa taagaatcaa
    26041 aatcatacag ttgttcaacg taatcactac atttcctttt gcaatcgcat tttcgtttcg
    26101 tataactgtt cgatatattt aaatttttcc tctttcgaca attgttcatt atcaataatc
    26161 tgaaatatct cggatttacg ttgttgcaaa gacaagcgat attgtttcaa ttgataaagt
    26221 gtctcataat ctttcaaagt caaatattta tggatatgta tcgtttggca attcgggtga
    26281 ttgtaatacg tagatgtcgt aatacataag tcaaagtttt gagacaacaa cgtcgcttct
    26341 cgttcagaat atggcccttg aaagtgaccg ataggcaaca agtcatttaa tttcgtatac
    26401 aaaatacgtt gttccacttt tgaaatattc gtcaccacga caatgtccat atgatgttcg
    26461 ggtgtttgat gttcaacata taaggattga atcgcataag caaactctga taaatctgac
    26521 acacttaaag gtcttctaaa tttttgttga aactgctgtg tttgcgaaag ttgttccata
    26581 atttgcgcag ttaattttga ccaattgtta atatctttat ccatttcccc agtcacatta
    26641 caacgatctg cataaccaaa aaactgtcga taatacacga cctttactaa cgtttgaatc
    26701 agctcgacaa atacagctct atcgttaaaa tgaattgctg tttgacgttc aaaggcatca
    26761 ataaac
//
LOCUS       DANHPA010000025        25460 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.025, whole genome shotgun sequence.
ACCESSION   DANHPA010000025 DANHPA010000000
VERSION     DANHPA010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 25460)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25460)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25460
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.025"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            48..665
                     /locus_tag="PTC28_000837"
     CDS             48..665
                     /locus_tag="PTC28_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 domain-containing protein"
                     /protein_id="HDK5716151.1"
                     /translation="MIRKKKDKFMERLEDMIFNLDRAAIEFGKMDFNTHLDLRAYADN
                     VKTYESHGDELMHQVITDLNQTFITPIEREDIMSLCNAIDDVLDAMEETSAMFEMYSI
                     EYTDEYMLEFVDNIQKAIGEMKLAIGLMTEKKLSHMRVHSINIKEYETNCDGILRQSI
                     KHIFNSETDPVTLIKIKDIYESLENIADRCQAVANNFETIIMKNS"
     gene            680..1681
                     /locus_tag="PTC28_000838"
     CDS             680..1681
                     /locus_tag="PTC28_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HDK5716152.1"
                     /translation="MEFLLLITVAIIIFSLLFDFINGFHDTANAVATAVSTRALTPRQ
                     AIFLAAIMNFIGALTFTGVASTITKEIVDPFTLDNGLIVVLSAILAAIVWNLVTWFYG
                     IPSSSSHALIGAIAGAAIASAGSVDVLHYQGFTKIVLVLILSPVIAFVVGFVMYTLVK
                     RVFRNANLTRTNRNFRIFQIFTASLQSFSHGTNDAQKSMGIITMALIVANMQTSVEPA
                     LWVKVACAAAMGLGTAVGGWKIIKTVGGNIMKIRPANGASADLASALTIFVASSLHFP
                     LSTTHVVSSSILGVGSSNRIKGVHWNTAKRMIVTWVITLPISALIAGTFYFILNLFL"
     gene            complement(1942..2778)
                     /locus_tag="PTC28_000839"
     CDS             complement(1942..2778)
                     /locus_tag="PTC28_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HDK5716153.1"
                     /translation="MKKLAFACTLTSGAAAVAMLNHQDADASTQYTVQSGDSLWSIAQ
                     KYGTTVDALKQSNQLQNNMVFPGQVLSIGGGSGAQSSATVPQQTGGTYTVQAGESLNV
                     IATKYGVSVQDLMRANGLTNYLIHPNQQLQIPGGNGGNGGNTAPKTGGAGGTGSISTS
                     GQYNTPTFNHQNLYDWGQCTYHVFDRRAQIGQPISTYWWNADHWAANAAADGYTVDHN
                     PTTGSIMQNFEGPVGHVAFVERVNYDGSILISEMNYNTPPGQQDYRTIPASIASSYNY
                     IH"
     gene            3119..3739
                     /locus_tag="PTC28_000840"
     CDS             3119..3739
                     /locus_tag="PTC28_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HDK5716154.1"
                     /translation="MATQNQRRSAYGKVWLFFMYYWLIFGISTYFGQFLPIAWRQPLS
                     IGLLVLILASMVFQRVRFSGPIISHIYTIVVGLLSYAAFMYTLQDLGARLFFNMVILA
                     VSGFVIFGILGYFWIKDASSLGKCLFVTLIALILASLVGWWIHSPVYYTMIAVVGLLL
                     FLLYTLYDFNRMKRGQFSPRELGFNLFINLFHIIRYVLELARIMKR"
     regulatory      3758..3866
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            3944..4534
                     /locus_tag="PTC28_000841"
     CDS             3944..4534
                     /locus_tag="PTC28_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDK5716155.1"
                     /translation="MMIVITPYVVLDDWHIKRLCVIESQIAGVILRTPMNRHALKQWL
                     IQLLANGFPKSKVIIHTDVTLAMELSISNVHFKEGDHRATLLKQVQPHYQVSMSTHSA
                     AMVRDAKAQQLDFVLFGHLFPTSSKPDLPPRTQLEVDEVLAIDFPVVALGGITADTVQ
                     QISSHFTGIACMSSAFGYELQSFEKMVDYWSLKKVK"
     gene            4535..4735
                     /gene="thiS"
                     /locus_tag="PTC28_000842"
     CDS             4535..4735
                     /gene="thiS"
                     /locus_tag="PTC28_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HDK5716156.1"
                     /translation="MEVFVNGEQQQFEEGTTVQDILDHFGIEAKRMAVERNAAVVKRS
                     AWATTEVQQDDRLELLEFVGGG"
     gene            4739..5506
                     /locus_tag="PTC28_000843"
     CDS             4739..5506
                     /locus_tag="PTC28_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016930788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HDK5716157.1"
                     /translation="MFKIGDLTFHSRLFLGTGKFESEAIQSKAIEASETEVLTFAVRR
                     MSLYDRSLPNPLANVDLSKFTTFPNTAGAKTAEEAVRIAELAREAGVCDMIKVEVIGD
                     DDTLLPDPLETYKACEILLEKGYIVCPYISDDVVLAKRLESLGVHAVMPLASPIGTGR
                     GITNPLNLRYIIEKCEVPVIVDAGIGSAKDCAEAMELGADAILLNSAVSRAQDPVKMA
                     EAMKKGIEAGRLSYEAGRIPIRYNAVQSSPSEGLGFL"
     gene            5506..6510
                     /locus_tag="PTC28_000844"
     CDS             5506..6510
                     /locus_tag="PTC28_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HDK5716158.1"
                     /translation="MTRYHRQIRFQHFGEQSQRRLQQLHVFVIGVGALGSGIAEQLVR
                     SGVGKLTIVDKDVVHLSNLHRQSGYVEADAEAMKPKVFALKERLAMMNHEVTIEPLYE
                     EVTARNIEGILEELQPDMVLDGLDRFETRYLVNEATRKLDIPYIYGAVVGSQLSVFPI
                     SHDGPCLHCVMPDVPETMESCDLNGVLPPAVHLASSFVVAEVFYYLMHGDFSYQMTTS
                     DIHQGKVKKISIQSLKEADCSVCAQHQFTRLQNKQLKSTQLLCGGVFQFRLAPGQFEA
                     TISKEVTILIDNRFVKRLRLGACDMTLYQDGRLLVYGAEDIQTAQSVARQLFEQPILI
                     "
     gene            6586..7302
                     /locus_tag="PTC28_000845"
     CDS             6586..7302
                     /locus_tag="PTC28_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009383182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDK5716159.1"
                     /translation="MGRKWNNIKEKKAQKDKNTSRIYAKFGKEIYVAAKSGEPDPESN
                     QQLKFVLERAKTYSVPNHIIDRAIEKAKGGGEEDFDALRYEGFGPSGSMVIVDALTNN
                     VNRTASDVRAAFGKNGGNMGVSGSVAYMFDHTATFAFEGFDADTVLEALMENDIDVRD
                     VIEEGGLTIVYAEPDQFATVQKALAQLGVTSFEVAELEMLPQSEVQLSAEDQETFEKL
                     IDVLEELEDVQHVYHNVELA"
     gene            7321..7800
                     /locus_tag="PTC28_000846"
     CDS             7321..7800
                     /locus_tag="PTC28_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HDK5716160.1"
                     /translation="MEAQDWVRHLELTPHPEGGYYRQTILSPDTTNERPHYSSIYFLL
                     EDKNISHFHRIDADEIWYYHAGETLTIHMIFPDHTYRAVQLGPNVAEGDVLQYVVPKG
                     TIFASSIERENAFAVVGCMVQPAFQFEHFELFTQAELLAWYPEHEEIIRKYAKVSVD"
     gene            8124..8720
                     /locus_tag="PTC28_000847"
     CDS             8124..8720
                     /locus_tag="PTC28_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016424430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF402 domain-containing protein"
                     /protein_id="HDK5716161.1"
                     /translation="MKVKYIDKRHWRRLLDHDYIEVKVNNNKFKGIIGLISIKKVRDP
                     LEVTVVNQRMVVADDGYQWLQILPEKKRYSMTVMFDDKGQPLQYYFDINLKNIIQKGR
                     ARTIDLCLDVLALPDGQYELVDQEDLERALKSNQITRKQYHEAYVIAHQLMIQIDEDF
                     ESIQKKAMYCYHKINRKYQKQEKYKQFETSNGDGFHTP"
     gene            8809..9678
                     /locus_tag="PTC28_000848"
     CDS             8809..9678
                     /locus_tag="PTC28_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDK5716162.1"
                     /translation="MKIDDYRLLITLDETRTLRKAAERLYISQPAVTQRLKSIERHFG
                     VDIFIRTKKQLITTTEGAMVIAHAKSMLKQERLFQDKIKAHVGAINGTLSIGCSSLVG
                     QTVLPEVLNRYTAEFPNVEIQLQVGSSEHIKANHNDYHIMIVRGNQLLNMHNDHLMDD
                     QHYFIYPKNKETELHKLPFIEFQADPVYINQIKTWYQQHMSQDYHARIKVDQVATCKA
                     LLLSGVGVTILPEIMVKDLDTSQFAMLKVDVEEQSLVRSTYLSYDMSMVQLPQVSSFI
                     NVFKTYLHIEDIE"
     gene            9758..10973
                     /locus_tag="PTC28_000849"
                     /pseudo
     CDS             9758..10973
                     /locus_tag="PTC28_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166191.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar efflux transporter"
     gene            10995..11486
                     /locus_tag="PTC28_000850"
     CDS             10995..11486
                     /locus_tag="PTC28_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HDK5716163.1"
                     /translation="MSDVIFWVLILAAFVLAFIGLIKPVIPAIPVLWVGFLIYQFGIN
                     GATLSWVFWTAMIVLTIFIFVSDLWLNRYFVNRFGGTKKGEWAALIGVLVGAFVLPPF
                     GVIIVPFIAVIIVEMVQSKNFAQAAKASFGSLVAFFSSAVMQAVLMFVMIVWFFIDAL
                     LIN"
     gene            complement(11571..12254)
                     /locus_tag="PTC28_000851"
     CDS             complement(11571..12254)
                     /locus_tag="PTC28_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1129 family protein"
                     /protein_id="HDK5716164.1"
                     /translation="MKTTNELMKENNVKSLRLNNTDRQIFESYMTYVRADMRVNAHDS
                     EKVLQRILDHLLKAENKGLHAMEFFDHHPKKHAIQTIKEMPNHTFKNICHYILQHIVF
                     LLGVFCFLKGFLGFFINDTRVFLYTFPLTFVAGIFVTFLFIWSCFKMIQLQAFDYSRL
                     AWLVGYVVLIALILLIFIIFFFPQNFLQFGPYIHISNWAFIIASFIIVPLGMLKYKND
                     DHAKSASWR"
     gene            12353..12808
                     /locus_tag="PTC28_000852"
     CDS             12353..12808
                     /locus_tag="PTC28_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDK5716165.1"
                     /translation="MILLTYEDSDYIHRVATEHVKLLQSDTLIRTQGTQIEIALYEEM
                     IAHRLRYAGDWLGIVTDREEHMKAYAWAHYEPANAQVTIESLYVDPEYRQQGYATELK
                     QQIEKWAKSQGARQIIGTVQQSNQAMVELNEALGYRVDKYIMSKSLEES"
     gene            12878..13213
                     /locus_tag="PTC28_000853"
     CDS             12878..13213
                     /locus_tag="PTC28_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716166.1"
                     /translation="MKKQLIALMGTVVLLSGCGNSEKEKLQNEIKSLEDEQKELKEEN
                     KKLKDQSEKLDSQIKDLEHSIDKAKTSEDKKKTSSKNNKKPTESKKDAKSTEKSKETS
                     DTQEKSSFE"
     gene            13336..13635
                     /locus_tag="PTC28_000854"
     CDS             13336..13635
                     /locus_tag="PTC28_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716167.1"
                     /translation="MYEKEFRLLEGRDISLVELGRELENITGYAIIDSTGELQRSIAL
                     KPNFDHDWETYTATYRLNHKNDFVDAVFTTQKGQNPERLKEVPITIQLLSYISRA"
     gene            13845..14393
                     /locus_tag="PTC28_000855"
     CDS             13845..14393
                     /locus_tag="PTC28_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDK5716168.1"
                     /translation="MTVYIETNRLKLRDWQDEDLQPFQQLNANRQVRQFFPSLLSYQK
                     TALDFEAMKSYLKHHQIGLFAVELKATKEWIGFIGVNYIPQTVDYPFEELPFYEIGWR
                     LSPEVWDNGIATEGAEAVLDYVAERGISEVYAMAAKVNHASIRVMEKIGMTHYDDFDK
                     PGLSEHHVLRPQVRYRKQLKEV"
     gene            complement(15204..15770)
                     /locus_tag="PTC28_000856"
     CDS             complement(15204..15770)
                     /locus_tag="PTC28_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002487609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HDK5716169.1"
                     /translation="MQRIAVYCGASKGLDETYVKEAYALGQYFAEQGIELVFGAGSVG
                     IMGAIQDGVLDHGGHAIGVMPRLLDEREITSQKVSELILVDSMHERKQKMADLADAFV
                     IAPGGAGSLEEFFEVYSWAQIGLHQKPIGIFNIKQFYKPLEALITHMIHEGFIDQKYE
                     KLAGVYETPQALLEGLKNAKPISTRTYD"
     gene            complement(15871..16317)
                     /locus_tag="PTC28_000857"
     CDS             complement(15871..16317)
                     /locus_tag="PTC28_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HDK5716170.1"
                     /translation="MRILIDGDACPVVDSIVRITAETGIFVYLFRTYSHFTVHDFPSH
                     VEVKYIDGGRDAVDFMLLQHAKANDIVVTQDYGLASLVLEKVKHVLHHNGHIYTSENI
                     DRLLAQRYYHQQARRKTKRHHKGPPAFDQKQRLDFETSFRHCIQSP"
     gene            complement(16318..17307)
                     /locus_tag="PTC28_000858"
     CDS             complement(16318..17307)
                     /locus_tag="PTC28_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716171.1"
                     /translation="MNKTIKMIVNVLPVFLVPLILERKKFKAHPDVQKVTQTTVNTSK
                     TVAHKTGQVANSVKDSVVSGSSHLKSTIQTKKRRHDYNKVMKKEAEIQRYNRPENVRA
                     RGKEIAKENRKEIDKLAKSLEKHIAERHKEEDRAFNQRQKQMIKTMKKMQKYEEKVGH
                     SLEQRDAKTEKRAEKIEKRNKKEVDKMNKDLKKHLKERHKKEEKVAKAREKALKKNMK
                     DMKKHEEKAGHTTDAAPTKRSVNQNNTVQSNEQQEKQRITTLSELQTTQSHTGKSQPT
                     PSAPGQVETTSDNAPLYEQHYQNMERQVQDSDILRQNQQLNDTSKKSMKKQGR"
     gene            complement(17690..18544)
                     /locus_tag="PTC28_000859"
     CDS             complement(17690..18544)
                     /locus_tag="PTC28_000859"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HDK5716172.1"
                     /translation="MLFFELIKAIILGIVEGMTEFAPVSSTGHMILVDDMWLKSTDFL
                     GPESAFTFKIVIQLGSIFAAAWIFRHKYFEMLHIGKYAPAQQPGRRSKPRRLNLLHII
                     IGMIPAGVLGLLFDDLIEKYLFSVPTVLIGLFLGAIYMIIADKFSLNVKNPKTLNEIT
                     YFQAFVIGLSQAVAMWPGFSRSGSTISTGVLMKLDHKSASDFTFIMAVPVMLAASGLS
                     IIKHLDYIELTHIPFYILGFLAAFTFGFISIKLFLKLIQNVKLLPFAIYRIVLVVVIA
                     VVYFGIIK"
     gene            18823..20460
                     /locus_tag="PTC28_000860"
     CDS             18823..20460
                     /locus_tag="PTC28_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HDK5716173.1"
                     /translation="MKQLHQWAKQFYSLPIFMAIVCIGLALSVVAQNVTIGIILEHIL
                     THQPTAWSVMIGFLALVLILRATLDFVNGWLGERLAHRVRQMIRGRLLHQVSRQAVGE
                     RLTMATETLSEMLPFYRNYLPQVFKSTFIPLAIIVTMLFVHIPTALIMLVTAPFIPVF
                     YIVFGLKTRDDAKNQMTFLNQFGQRFLSLTKGLVTLKLFNRSEQAVETISEESTQFRD
                     KTMTILKSAFLSGLMLEFISMLGIGLVALEVGLSLIVFQSIHFGTAAIAMIMAPEFYN
                     AIKDLGQAFHTGKESEGASDVIHAALEKCEVVTGHEISVDENQTPLIQVRNLQYHYPN
                     TTSNVLTEMHLDIFEGDRIALVGPSGAGKSTFVRLLIGELLPQEGRITYQRQDLKIGY
                     LSQNPYIFNATIAENVAVFNDVPTEKITAALEAVQLMPVVQRFHYGIETLIGEGGEML
                     SGGEMRRIELARLLLLEPDFVVLDEPVAGLDSTTEQVIQQTLDRYFQHATRLTIAHRQ
                     STIQHATRRIYLADGTIQSDDDHIQLSLTHTQNGGEE"
     gene            20461..22122
                     /locus_tag="PTC28_000861"
     CDS             20461..22122
                     /locus_tag="PTC28_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding/permease
                     protein"
                     /protein_id="HDK5716174.1"
                     /translation="MKLQQVINIKWDKDIVMAICIGVFGSLVALSMFFLSGYMITQSA
                     LGAPLYALMGLIVTVKLFGFIRAITKYYERLRSHRATFTMLRDVRVQLYRALIPIVPD
                     VFRKFRSSDLLGRMVTQVEALQNIYLRVYYPPIVIGITTLISAVTLVYFSWAHAVVLI
                     ITIAIALFILPALRVKQSTRVRLHVNQTGARWMHAYFDYILGHDELKRFKSDKKYNAQ
                     LMASEAAFSQAEHLSQKSHLVYDYIRHLISMAALLGSIVLVVVMVEQQQVDIVYVTSI
                     ILMILTLLEQAVPMSQVADYKSETDLAQQSLSEVMGYRKRAVGKEQVDVHQISHDAPL
                     LTLKDVTLCYEHQQRPSVQHLNLHIHKGEHIAIVGTSGSGKSTLLQLLMGLYTPSEGQ
                     ILIGDHALNDLDMIHYYQQLNTMLQQPHFYDDTVYGNLLTNASTTQCRTVLDQLHLQH
                     IALDRPVTFNRNTLSGGEFQRLALARLMLREASIWLLDEPTTALDIENTKDVMRQIHQ
                     QAETLVVATHDVQYLAQFDRIIQMQEGKVIGDMTPEQFLAEKVHE"
     gene            complement(22508..22945)
                     /locus_tag="PTC28_000862"
     CDS             complement(22508..22945)
                     /locus_tag="PTC28_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDK5716175.1"
                     /translation="MSDHLNLKEQVCFSLYNAQRQVNRYYSNKIFKKYKLTYPQFLVL
                     EILWDQSPVNVKKVVTDLALDTGTVSPLLKRMEQIDLIKRERSEIDQREVFVHLTEKS
                     KAMEPELANASQQVAEASSLTPDEVNELTRLLEKVITAFDESK"
     gene            23177..24106
                     /locus_tag="PTC28_000863"
     CDS             23177..24106
                     /locus_tag="PTC28_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HDK5716176.1"
                     /translation="MFKKQTSLILIHGFLGSGKTTFLNHYMTQILKKDEKVALIVNEF
                     GDFDVDSHLLSQYHVQQSALQGCICCDIQHDLIAHLYQLTRDAEVDYIIVEATGVANP
                     IDILVACQDPLLVDAFSSIETIGLVDSVRFIKRHDNTAQTKALMEDQVRASQTILVNK
                     VDLIEDDAQLQMVIEDIKALSPKSRIVLTQYGETLKTIEKGANAQNVDVTGFHSHTHA
                     HYTSLQYQFNSAVSQEALVQFILRLPDNVLRLKGYIRLREQSDEIFLIQYSEGVPAIE
                     SVGHLTLPTSIIIIGEQLDKAMLRNQLDMLQFT"
     gene            24133..25041
                     /locus_tag="PTC28_000864"
     CDS             24133..25041
                     /locus_tag="PTC28_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDK5716177.1"
                     /translation="MDQITINQHVKYSRVIQGFFRAHQWQKSTQAMNRFIHELVERGV
                     TTMDHADIYGHYTVEKMFGDALALSPELRDKIQIVTKCGIVLPNHIYPEQTDHRYDLS
                     KQHIKRAVERSLKSFQVEYLDSLLIHRPSPLMKPCEITDALKDLVQEGKLLSFGVSNF
                     QRPQYELLNRCLKDDKFHIAVNQIEISPYHLEAFHDGTIDDMYREGVKLMAWGPFAGG
                     RLFDENDPVAARVLPVITRIAKAHHTSVAAVVSAWFKKNPADIMPIIGTERLERVDEV
                     IDGLQLELHDQEWFDIFTAAQGFDIP"
     gene            25124..25405
                     /locus_tag="PTC28_000865"
     CDS             25124..25405
                     /locus_tag="PTC28_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716178.1"
                     /translation="MTEEEKIKRSRFKRNVIAIPYIIFGFIVALLFIFSPDIIWLVTI
                     FGIFMVYNVIAMFIAFLFKYGRTALYLLMMTLLMAGAFALYLYMLLEFH"
BASE COUNT         7811 a         4337 c         5372 g         7940 t
ORIGIN      
        1 acttttacaa tagtgattta ggtaatcgct gaatggagga ttttaacatg attaggaaga
       61 aaaaggataa gttcatggag cgtctagagg atatgatttt caatttagac cgagctgcaa
      121 ttgaattcgg taaaatggat ttcaacaccc atttagattt gcgagcttat gccgacaacg
      181 tgaagacgta tgaatcacat ggtgacgaat tgatgcatca ggtgattaca gacctcaatc
      241 aaacatttat tacaccaatt gaacgtgaag acattatgtc gttgtgtaat gcgattgatg
      301 acgtcttaga tgcgatggaa gaaacgtccg ctatgtttga aatgtactca atagaataca
      361 cagatgaata catgttagag tttgtagata atattcaaaa agcaatcggg gaaatgaaat
      421 tagcaattgg cttaatgaca gagaaaaagc tttcacatat gcgtgtacac tcaatcaata
      481 ttaaagaata cgaaacgaat tgtgatggta ttttacgtca atccattaaa catatcttta
      541 atagtgaaac agaccctgtc actttaatta agatcaaaga catttatgaa agtttagaaa
      601 atattgctga ccgctgccaa gctgttgcga ataattttga aacaatcata atgaaaaata
      661 gctaagggag tcctcattta tggagttttt gttgcttatt acagtagcta tcattatctt
      721 ttcgttatta tttgatttta ttaatggctt tcacgataca gcgaatgccg tagcgacagc
      781 agtatcgacg cgtgcgttaa caccaaggca agccattttc ttagcggcca ttatgaactt
      841 tattggtgcc ttgacattta caggtgtggc ttcaacgatt acaaaagaaa ttgtggatcc
      901 atttacttta gacaatggtc tcatcgttgt attatccgcg atattagctg caattgtgtg
      961 gaatttagtc acttggtttt acggtatacc gagttcgtct tcacatgcgt taatcggtgc
     1021 aattgctggt gcggcgattg cttctgcagg gtcagttgat gtcttacact atcaaggttt
     1081 tacaaaaatc gtgcttgttt taattttatc acctgtgatt gcgttcgttg taggttttgt
     1141 catgtatacg cttgtcaaac gtgtatttag aaatgcgaat ttgacacgta cgaatcgtaa
     1201 cttccgtatt tttcaaattt tcactgcgtc tttacagtcg ttctcacacg ggacgaatga
     1261 tgcgcaaaag tcaatgggta tcattacaat ggcgttaatc gtagcgaata tgcaaacaag
     1321 tgtcgagcca gcattatggg taaaagtagc ctgtgctgct gcaatgggct taggtacagc
     1381 agtcggtggt tggaaaatca ttaaaacagt cggtggcaat atcatgaaaa tccgtcctgc
     1441 aaatggggcg tcagcagact tagcatcagc gttaacaatc tttgtcgcat catcgttaca
     1501 tttcccattg tcaacaacac acgttgtttc atcttcaatt ctcggtgtgg gctcatcgaa
     1561 tcgaattaaa ggtgtgcact ggaatacagc gaaacgtatg attgtgactt gggtgattac
     1621 tttacctatt tctgcattga ttgccggtac tttttacttc attttaaatt tattcttata
     1681 acgataaata tataagcaag gagctgagat gtatgtcttg gcttcttttt gatgccaatt
     1741 attttgggga atagtacaaa gttcttgttt gtgacaaagg tgtcgtcgtg ttgctctggc
     1801 aaagagggtg cgcttctcac aaacgtcgca cagactttga caaactataa aaacacaatg
     1861 tgcattttcg ttaattgggg aataaaaaaa agattaacta atgatgtacg aaaacacctt
     1921 agttaatctc tttttacaat attaatgaat ataattgtat gatgaagcaa ttgatgctgg
     1981 gattgtacga taatcttgtt gtcctggtgg cgtattgtag ttcatttctg aaattaaaat
     2041 actaccatca tagttcacac gttcaacaaa agcaacgtga cccacaggac cttcaaagtt
     2101 ttgcataatt gaacccgttg ttggattatg gtctactgta taaccatctg ctgcggcatt
     2161 agctgcccaa tgatcagcgt tccaccaata cgtactaata ggttgaccga tttgtgcacg
     2221 acgatcaaat acatgatacg tacattgacc ccagtcgtat aagttttgat ggttaaatgt
     2281 aggtgtattg tattgaccgc ttgttgagat actacctgta ccgccagcac cacctgtttt
     2341 tggtgcagtg ttgccaccgt tgccaccgtt gccaccaggg atttgaagtt gttggttagg
     2401 atggattagg tagttcgtta atccgttagc acgcattaaa tcttgaacag acacaccata
     2461 ttttgtggca atgacattta aagattcgcc agcttgtaca gtgtatgtgc ctccagtttg
     2521 ttgcggtact gtcgcagaag attgtgcacc actaccgccc ccgatagata agacttggcc
     2581 agggaagacc atgttgtttt gtaattgatt ggattgctta agtgcatcaa ctgttgtgcc
     2641 atatttttgc gcgatggacc acagtgaatc accagattgg actgtgtatt gtgttgacgc
     2701 gtcggcatct tgatgattga gcatagcgac ggctgccgca cctgaagtca acgtacatgc
     2761 aaatgcgagt tttttcaatg tattgcctcc ttatttacac gaatgataag atgtgttgag
     2821 caatgaataa cgaaatgtgt aatttgatta ttaattcaat cattatgata acaaaaatat
     2881 tatcatatag gggagatgtt acgaatctgt aatattgcgg aaaatatagt tttactgtcg
     2941 tattgtcctt gaatgttgtc actatccaat ttatagaaaa tttgatttgt aaatcttttg
     3001 agataattaa agtttttgta atataaatgt agtctttatc aatggaatag ttgtatcatt
     3061 tctgcatttg attctgctgt gacatatcat aaaatagaag gaaaggaggc aaaatgagat
     3121 ggcaacacaa aatcaacgcc gttctgctta cggcaaagta tggttgtttt ttatgtatta
     3181 ttggctaatt tttgggattt caacatattt tggacaattt ttgcccatag catggcgaca
     3241 accactttct atcggactac tcgtcttaat cttagcatca atggtatttc aacgtgtgcg
     3301 ctttagtggc ccgattattt ctcacattta taccattgtc gtcggattat tatcctatgc
     3361 ggcatttatg tatacattgc aagatttagg tgcgcgttta tttttcaata tggtgatttt
     3421 agccgtatct ggattcgtca tttttggtat tctcggttat ttctggatta aagatgcgtc
     3481 gagcttaggc aaatgtttat tcgtgacatt aatcgcgctt attttagcaa gtcttgtagg
     3541 ttggtggatt cacagcccag tttattatac gatgattgca gttgtcgggt tattactatt
     3601 tttactgtac acactttatg acttcaatcg tatgaagcga ggtcagtttt caccacgaga
     3661 attaggcttt aatttattta taaacctttt ccacattatt cgttatgtgt tagaattagc
     3721 tcgtatcatg aaacgataaa acaattgaat atttcaaaca atccactgga agtgccgttc
     3781 ataatggctg agattgaaat gttgatttca aaattcctga acctgatcca gttcgtactg
     3841 gcgtaggaaa gtggctgtat tcgtgtcaaa tgaggctact tttctgttgt aaataacggg
     3901 ggagtagttt ttttattgtg aagggaaaga gagggaaaag gcaatgatga ttgtgattac
     3961 accgtatgtt gtattagacg actggcatat caaacggctc tgtgttattg aaagtcagat
     4021 tgcaggtgtc attttacgga cgccgatgaa tcgacacgca ctcaagcaat ggctcatcca
     4081 gttattggcg aatggctttc caaagtctaa agtgattatc catacggatg tgacattagc
     4141 gatggaactc agcatttcca atgtgcattt taaagaggga gatcaccgtg ctacgttatt
     4201 aaaacaagta cagcctcatt atcaagtgag catgtcgaca cattcagcag cgatggttcg
     4261 tgacgcaaaa gcgcagcaat tagattttgt gttattcgga cacctttttc caacctcttc
     4321 aaaacctgac ttgccaccgc gcacacaact tgaagtggat gaagttttag ctattgattt
     4381 tccggtagtg gcattggggg gcattacagc tgacacagta caacagatat cgtctcattt
     4441 tacaggaatc gcgtgtatga gcagtgcatt tgggtatgaa ctgcaatcgt ttgaaaaaat
     4501 ggttgattat tggtcattaa agaaggtgaa atgaatggaa gtttttgtaa atggagagca
     4561 gcaacaattt gaagaaggca caacggtaca agacatttta gaccatttcg gtatcgaagc
     4621 gaaacggatg gcagtcgaac gtaatgcagc agtcgtgaaa cgttctgcat gggccacaac
     4681 tgaagtacag caagatgatc gattagaatt gttagaattt gtgggaggcg gttaacatat
     4741 gtttaaaatt ggagatttaa catttcattc aagattattt ttagggacag gaaaatttga
     4801 aagtgaagcg atccagtcta aggccattga agcatccgaa acagaagtgc tgacatttgc
     4861 ggtcagacgt atgagtttat atgaccgaag cttaccgaac ccattggcga atgtcgattt
     4921 atctaagttt acaacatttc ctaatacagc aggtgcgaaa acggcagaag aagcggtgcg
     4981 tattgccgaa ttagcgcgtg aagctggcgt gtgtgacatg attaaggtcg aagtaattgg
     5041 cgatgatgat acgttattac ctgacccact cgaaacgtac aaagcttgtg aaattttatt
     5101 agaaaaaggc tacattgttt gtccatatat ttcagatgat gtcgtgttag ccaagcgact
     5161 cgaaagttta ggtgttcatg cggtaatgcc acttgcttct ccaatcggta caggtcgtgg
     5221 tattacaaat ccactgaacc tccgttatat tattgaaaag tgcgaggtac ccgttattgt
     5281 agatgcaggt attggttcag ccaaagactg tgccgaagcg atggaacttg gtgcagatgc
     5341 gattttgctc aattcagctg tatctcgtgc gcaagatcca gtgaaaatgg ctgaagcgat
     5401 gaaaaaagga atcgaagcgg gtcgtttgag ctacgaagca ggccgtatcc caattcgtta
     5461 taatgctgtg caatctagtc catctgaggg gttaggcttt ttataatgac acgctatcat
     5521 agacaaattc gcttccagca ttttggagaa cagagccaac gtcgattgca acaattacac
     5581 gtctttgtca tcggtgtcgg cgctttaggc agtggcatcg ctgaacaatt ggtaagaagt
     5641 ggtgtcggta aattgaccat cgtcgataaa gatgtggtac atttatctaa cttacaccgt
     5701 caaagtggct atgttgaagc ggatgctgaa gcgatgaagc cgaaagtatt tgcgctaaaa
     5761 gaacgactcg cgatgatgaa tcatgaagtc acaatagaac cgttatacga agaagtgaca
     5821 gcacgaaata ttgaaggcat tcttgaggaa ctgcaaccgg atatggtact tgatggcttg
     5881 gatcgttttg aaacacgtta tttagtgaat gaagcaacac ggaaattgga tattccttat
     5941 atttatggtg cagtcgtggg aagtcagttg agtgtctttc ctatcagtca tgacgggcct
     6001 tgtttacatt gtgtgatgcc ggatgtgccc gagacgatgg aaagttgtga ccttaacggc
     6061 gtcttgccac ccgctgttca tttggcgagt agttttgtcg tggcagaagt cttctattac
     6121 ttgatgcatg gtgatttttc ttaccaaatg acgacgagtg atattcatca aggaaaagtg
     6181 aaaaaaattt cgattcaaag tcttaaagaa gcagactgtt ccgtatgtgc ccagcatcag
     6241 ttcacgcgtc tgcaaaataa acagcttaag tctacgcaat tgttatgtgg cggtgtgttt
     6301 caattcaggt tagctccagg acaatttgaa gcgaccataa gtaaagaagt cacaatttta
     6361 attgataatc gtttcgttaa acgtttacga cttggagcgt gtgacatgac attgtatcaa
     6421 gatggacgtt tgttagtata tggtgcagag gatattcaga ccgcacaatc cgtcgctcga
     6481 caactgtttg aacaacccat tcttatttag aatgttgcca tagtctaaat tttacatgta
     6541 taataaaggg tactcaaaaa agtatttgaa agcgagatgg aagtcatggg acgtaaatgg
     6601 aataatatta aagaaaagaa agcgcaaaaa gataaaaata caagtcgcat ttacgctaaa
     6661 tttggtaaag aaatttacgt ggcggcgaaa tcaggtgaac ccgatcctga atcaaaccaa
     6721 caattaaaat ttgtccttga acgcgcaaaa acttattctg tacccaacca tattattgat
     6781 agagcgattg aaaaagcaaa aggtggcggc gaggaagact tcgatgcact tcgctatgaa
     6841 ggtttcggtc cgagtggttc gatggtgatt gtggatgcct taacgaacaa tgtcaatcgt
     6901 acagcctctg acgtgagagc agctttcggt aaaaacggcg gaaatatggg tgtatctggt
     6961 tcagtggctt atatgttcga ccatacagcg acatttgcat ttgaaggctt tgatgcagat
     7021 actgtacttg aagctttaat ggaaaatgat attgatgtcc gtgacgtcat tgaagaaggt
     7081 ggtttaacga ttgtatacgc agagcctgat caatttgcga ctgtccaaaa agcgttagca
     7141 caactaggtg tgacatcatt tgaagtcgct gaacttgaaa tgttaccaca atcggaagtt
     7201 caactttcag cagaagatca agaaacattt gagaaattaa tcgatgtatt agaagaatta
     7261 gaagacgttc aacacgttta tcataatgta gaacttgcat agttactgga ggtcaatgcc
     7321 atggaagcac aagattgggt gcgccattta gaattaaccc ctcatccaga aggaggctat
     7381 tatcgtcaaa cgattttaag tccggatacg acaaatgaaa gaccgcatta ctctagcatt
     7441 tattttctgt tagaggataa gaatatttcc cattttcatc gtattgatgc ggatgagatt
     7501 tggtattacc atgcgggtga gacgttgacg attcatatga tttttccaga tcatacgtat
     7561 cgtgccgtgc aattaggtcc gaatgtcgcg gagggggatg tattgcaata tgttgtgcca
     7621 aaagggacaa tatttgcgtc atctattgaa cgtgaaaatg cctttgcggt tgtcggttgt
     7681 atggtgcaac ctgcatttca atttgaacat tttgagttgt ttacacaagc ggaattgtta
     7741 gcatggtatc cggaacatga ggaaatcatt cgtaaatatg cgaaggtttc ggtcgattaa
     7801 tcgatcggtt tgaaaggctg atgagatgtg atgtcttatc ggtctttttt tgttgtcacc
     7861 attgatagtg aaggggtaaa cgaaacttaa aggttacttg aatcaagtta tgcttttcca
     7921 aggatttgac gcaactgtac gatgttgatt ttgaatctca tgcatcaaaa cgtgtatatc
     7981 gtcttagtaa aaaatagggt gattgagtgc gtgtttatca tgtttttgat tggattcgct
     8041 atgaatttta tatgattggc tagttgcaac aagtgacatc ctacttcgat ttatatataa
     8101 tgaaaaaaag ggagttggtg gctgtgaaag tgaaatatat tgacaaacgt cactggcgtc
     8161 gcctcttaga ccatgattat atcgaagtta aagtcaataa taataaattt aaaggcataa
     8221 taggtttaat ttcaatcaaa aaggtgagag atcctttaga ggtgactgtt gtaaatcaac
     8281 gaatggtagt agctgacgat ggctatcaat ggctacaaat cctgccagag aaaaagcgtt
     8341 acagcatgac agtaatgttc gatgacaaag gtcaaccttt acaatactat tttgatatta
     8401 atttaaaaaa tattatacaa aaaggcaggg cacgtacaat cgatttatgt ttagatgtgc
     8461 ttgctttacc agatggccaa tatgaacttg tagaccaaga agacttagag cgtgcattga
     8521 aatcgaatca aattacgcga aaacaatatc atgaagctta tgtgattgcg catcaattaa
     8581 tgattcaaat tgatgaggat tttgagagta ttcaaaagaa ggcgatgtat tgttatcaca
     8641 aaattaatcg caaataccaa aagcaagaaa agtacaaaca gtttgaaaca tcaaatggag
     8701 atggttttca cacaccgtag caaccaccac tgtgtgctgt gaaaggattt ctgcacactg
     8761 gacaaatatc ttgtctagtg tttcttttat ttttgaggag gctgtacgat gaaaattgat
     8821 gattatcggt tattaattac tttagatgaa acacgcacac tgagaaaagc ggctgaacgt
     8881 ctttatattt cacaacctgc tgtgacccaa cgtttgaaat ccattgaacg tcattttggt
     8941 gtcgacattt ttatccgtac gaaaaaacag ctgattacga cgacggaagg tgcgatggtc
     9001 attgcgcatg cgaaatcgat gctgaaacaa gagcgtctat ttcaagataa gattaaggcg
     9061 catgtcggtg caattaatgg gacactatcg attggttgtt cctctttagt cggtcaaacg
     9121 gtattaccag aagtattgaa tcgctacact gcggagtttc caaatgttga aattcaatta
     9181 caagtcggct ctagtgaaca tattaaagcg aaccataatg attaccatat tatgatcgtg
     9241 agagggaatc agttgttaaa tatgcacaac gatcatttga tggatgatca acattatttc
     9301 atctatccta aaaataaaga aactgaatta cataagctac cttttattga gtttcaagca
     9361 gaccccgtct atattaatca aattaaaaca tggtatcaac aacatatgtc ccaagattat
     9421 catgcgcgca ttaaggtgga tcaggtcgcg acatgtaaag cgttgttgtt aagcggcgtc
     9481 ggagtgacga ttttaccgga aattatggta aaagacttag acacctctca gtttgcaatg
     9541 ttaaaagtgg acgtagaaga acaatcttta gtccgttcta cgtatttaag ttatgacatg
     9601 agtatggtac agttacctca agtcagttca tttattaatg tgtttaagac gtatttacac
     9661 attgaagata tcgaataaag acatgtgatg gagagcaaaa gagagcacaa caccatgcga
     9721 ttcaatatta attttaagta tataagggag aacatacatg tttcgtgaat tgttaacgat
     9781 taaaaattat aagttattta ttgtgaatat gatgctaatt gggatgggca ttgcgattac
     9841 agtcccattt tttgttctat ttgcaacgaa ccaattgggg atgacgacca atcaatttgg
     9901 gttgttattg gcattagcgg caatctctca atttacgatg aatagtattg tcgcgcgttt
     9961 ttcggatacg catgcaatca atcggaaagt gattattatt gtaggtttat tcatgggcgc
    10021 tattagtttt acattgccat tttttgtaca ttcggttgta ctatttatta ttttgtatgc
    10081 catttttcaa gggttattcg ctccggctat gccccaactt tatgcttctg caagggaatc
    10141 tattaatcaa tctacatcga gtagtcgcgc ggtttttgcc aattctgtat tacgttctat
    10201 gttttcgttc ggctttttat tcggcccact agttggtaat attttaaatc agtcgtgggg
    10261 ctacagtggt ctgtttggtg gaacagtcgc cattattttg acgactctac tcctacaagt
    10321 gttctttttt aaggacatca aagcgaaaaa gcctgtgcgt gacagtataa tgacagaaca
    10381 agatgcacct tctatgttga aacatcgcta tttaattgtg ccgttcattg ctttcgtact
    10441 gttacacatt ggccagtgga tgtacacgct caatatgcct ttatttgtga cgcaatactt
    10501 acatgaagaa gaaaaatatg tcggtcatct tgcgagtttg tgtgccggtt tagaagtgcc
    10561 gtttatgatc attttaggta tggttgctag taaagtagaa acacgaacgc tattagcgat
    10621 tgcggcagtt tgtggtagtt tgtggtagtt tgtttttcgg tagtatcgga atatttgaaa
    10681 gtatccacat gatgcttgtt ggtcaagtgt tactcgcggc atttttagcg gtattacttg
    10741 gcatcggtat tagttatttc caagatgttt taccgcaata tccaggctat gcgtcgactt
    10801 tgttcgcgaa tgcaatggtt atcggtcaat tgttagggaa tttattaggt ggtgcgatga
    10861 gtcagtgggt cggtttaggc aatgtctttt atgtttctgc gctatcattg gcatgtggtt
    10921 ttgtgttaat tttatttact aagaaaagta gaaaaactgt tcaaactgtg taaataagga
    10981 gttgacgtat aataatgtca gacgtgattt tttgggtgct tattttagcc gcattcgtat
    11041 tggcatttat cggtttaatc aagccggtga ttccagctat tcccgtattg tgggtgggat
    11101 ttttgattta tcaatttggc attaatggtg ccacgttatc atgggttttt tggactgcaa
    11161 tgattgtact cacgatattt attttcgtat ctgacttatg gctcaaccgc tattttgtga
    11221 atcgatttgg aggcacgaaa aaaggggagt gggccgcttt aatcggtgta ctcgtcggtg
    11281 cgtttgtgtt gccgccattc ggtgtgatca ttgtgccatt tatcgctgtt attattgttg
    11341 aaatggtgca gtctaaaaat ttcgcacaag cagccaaagc aagttttggg tcacttgtcg
    11401 catttttctc tagcgccgtc atgcaagcgg tactcatgtt tgtcatgatt gtttggttct
    11461 tcattgatgc gttattgatt aattaaaata ataaaaatag tcaggtgaat aaatggtaaa
    11521 ttacgccatt catcaacctg acttttttaa tggatgcagc aagttgaaat ctatcgccaa
    11581 gatgcacttt ttgcgtgatc gtcattttta tatttcaaca tgcccagtgg aacgataata
    11641 aacgatgcga taataaatgc ccaattacta atatggatat acgggccgaa ttgtaaaaag
    11701 ttttgtggaa aaaagaaaat aataaaaatt aataaaataa gggctatcaa tacgacatag
    11761 ccgactaacc aagcgagacg tgaatagtca aaagcttgaa gttgtatcat cttaaaacaa
    11821 gaccaaatga ataaaaaagt aacgaaaatt cccgcaacaa aagtgagcgg aaaagtgtat
    11881 aaaaagacgc gtgtatcatt aatgaaaaat cctaaaaacc cttttaagaa gcagaatacg
    11941 cccaacaaaa agacgatatg ttgtaaaata taatgacaaa tattcttaaa cgtatggtta
    12001 ggcatctctt taatcgtttg aatggcgtgt tttttagggt gatgatcaaa aaattccatc
    12061 gcatgcaagc ctttattttc cgctttgagt aaatggtcta aaatacgctg tagcactttt
    12121 tcggagtcat gtgcattgac acgcatatcc gctcgaacat aggtcatgta actttcaaag
    12181 atttgacgat ccgtattgtt cagccgtaac gatttaacat tattttcttt catcagttca
    12241 ttcgtcgttt tcatcggtca agcacctcct ctaatttcaa tcatagtgaa ctgtacttat
    12301 tatgacgata ttcatgagat aaatcaatcc taaaatatga aaggagagag tcatgatttt
    12361 acttacatat gaagatagcg actatattca tcgtgtagca acggagcatg tcaaactgtt
    12421 acaatcagat actttaatac gaacgcaagg cacacaaata gaaatcgcac tttatgaaga
    12481 aatgattgca catcggttgc gttatgctgg agactggcta ggcatcgtga cagacagaga
    12541 ggaacatatg aaggcttatg catgggcaca ttatgaaccg gcaaatgcgc aagtgaccat
    12601 tgaatcatta tatgttgacc ctgaatatcg acaacaaggg tacgcgactg aactgaaaca
    12661 acagattgaa aagtgggcca aatcacaagg tgcacgtcaa atcatcggta cagtacaaca
    12721 atccaatcaa gcaatggtgg aactgaatga agcgttagga taccgtgtgg ataaatatat
    12781 tatgtcaaaa tcattagaag aatcataagc attatgcgaa tctgtttaaa ccatgataaa
    12841 ataaagtgta agtcattcta aatggagaga aataacaatg aagaaacaac ttatcgcact
    12901 tatggggacg gtcgtattgt tatcagggtg tggcaatagt gaaaaagaaa aactacaaaa
    12961 tgaaattaaa tcgttagaag acgaacaaaa agaattaaaa gaagaaaata aaaagttaaa
    13021 agatcaaagt gaaaaattag atagtcaaat taaagatctt gaacattcta ttgataaagc
    13081 gaaaacttca gaagataaga agaaaacgag tagcaagaac aacaagaaac caacagaatc
    13141 taaaaaagat gctaaatcaa cagaaaaatc aaaagaaacg tctgatacgc aagagaaaag
    13201 ctcatttgag tgattcattt aatgtcaatt tgatattttg cgctattgac ccaacccaca
    13261 atgaattgcg tttgatgttg agagggacag ggtaataaaa acacatatat tacggagaga
    13321 aaagagggtt atcgtatgta cgaaaaagaa tttagattat tagaagggcg cgatatttca
    13381 cttgttgaac ttggacgcga acttgagaat attacaggat atgccattat tgattccaca
    13441 ggtgaattgc aacgttctat cgcattgaaa cctaattttg atcatgactg ggaaacgtat
    13501 acggcgacat atcgtttgaa ccataaaaat gattttgtgg atgctgtatt tacaacacaa
    13561 aaaggacaaa atccagaacg attaaaagag gtacctatca cgattcaact gttgagctat
    13621 atttctagag cgtaatgaca tcaatatcgc atcgacaact gaaggcgcag gttacatctg
    13681 atcaagaagt ttaataaagg tgaaagatgt tgactgaaga agcgcccagt aaaaatttca
    13741 gaaatcaaat gcataactga ggcgggaagc tgaaatcaca aggcatatat gcgatttctg
    13801 acccgcttct ttctttggat acacggttaa atgggggatg cacaatgaca gtttatatag
    13861 agacaaatcg attgaaattg agagactggc aagatgaaga tttgcaacca tttcaacaat
    13921 tgaacgcaaa tcgccaagtg cgccagtttt ttccgagttt attaagttat caaaaaacag
    13981 cattggattt tgaagcgatg aaatcttatt taaagcatca tcagattgga ttgtttgctg
    14041 tagagttaaa ggcaacgaaa gagtggatag ggtttatagg tgtgaattat attccacaaa
    14101 ctgtagatta tccttttgaa gagctcccat tttatgaaat cggttggcga ctgtctcctg
    14161 aagtttggga taatgggatt gcgacagaag gggcagaagc ggtactcgat tatgtagctg
    14221 aacgcggcat aagtgaagtg tacgcgatgg cagccaaagt gaaccatgca tcgattcgtg
    14281 tgatggaaaa gattggcatg acacattatg atgatttcga caagccgggt ttgagtgaac
    14341 atcatgtgtt gaggccacaa gtgcgttata gaaagcagtt gaaggaagta taagtgcatt
    14401 acttttaatg atgcccagta tgaagtgaaa cagctgctgt gcaaagaagt caataatata
    14461 aattgaattg catattaaaa gttgtgaggc tgaggcggcc tcttttttat gttttttcaa
    14521 gaaattagaa gtaaaaatac gcgatggtac gtgtatagaa gcaacagatt aaatcgaggt
    14581 gcagtcggaa tgaaaggcga gaggtaacat aaaaatagag cgcgtgcaaa gggctacata
    14641 gaaaatatta agcgcaatct attcagaggt tgatgattca ttaatgtttt taaaatagtc
    14701 ggaaaatgag ggtgaatgga atacaaaaaa tggatgctat tgttttcttg atttcatata
    14761 cttgccctca gtttcgctgt aattgatatc aaattgacta gacggctgag acgcctgagg
    14821 gaatgcatgc atactgctcg caactacttc tttactttaa tagtggttac tgtttaccgt
    14881 aggagctgtc tgacttctca aggcgcatgc ttttgagaag tcgagtcagc cttgtggggt
    14941 acagtgcgac gatatctttg ttgtacatga gatttctgta ctactcccaa tatccactaa
    15001 cgattaacaa atgtaacagt ttaatcaagc gttagtgagt tgtaggacca gcccctagga
    15061 aacgcgaagc tatgaaggca atcaaaacta caaatcatag gtaaagggta agttaaacaa
    15121 gaattctgta tcaatcgcat caaaaatttt tgtgtctcat tcccttgtaa ttttgctgtg
    15181 gtatatacaa aaagcagtca tacttaatcg tatgtacgtg ttgaaatcgg tttggcattt
    15241 ttaagacctt ccaataatgc ttgaggcgtt tcatacacac ctgcaagctt ttcatacttt
    15301 tgatcaataa agccctcatg aatcatatgt gtaatcaatg cttctagagg tttgtaaaat
    15361 tgtttaatat taaaaatacc gataggcttt tggtgcaatc caatttgtgc ccaactataa
    15421 acttcgaaaa attcttcaag ggaacccgca ccacctggag caatgacaaa tgcatcggcg
    15481 aggtctgcca ttttttgttt acgttcatgc atggaatcga ccaaaatcag ctcagatact
    15541 ttttggctcg taatttcacg ctcgtctaat aatcgaggca tcacacctat tgcatgaccg
    15601 ccatgatcta atacgccgtc ctgtattgcg cccataatgc ccacagatcc cgcaccgaaa
    15661 accaactcaa tcccttgttc tgcaaagtac tgacctaaag cataggcttc tttgacatag
    15721 gtctcatcca atcctttact tgcgccacaa taaactgcta tacgttgaat cattttcatc
    15781 gctccttgtt taaatcaatt tttagttata gtttaaagca aaaagaagtg catgtgtagt
    15841 aaaacaagaa atgttaagac acatgcacag ctatggagat tggatacagt ggcgaaaaga
    15901 ggtttcaaaa tcgagtcgtt gcttttgatc gaatgcaggt ggccctttat gatgacgttt
    15961 tgtttttcga cgcgcttgtt gatgatagta tcgttgggca agcagacgat caatattttc
    16021 ggatgtataa atgtgaccgt tgtgatgcaa gacgtgtttg actttttcta acactaaact
    16081 ggctaaccca tagtcttgtg tgacaacaat atcattcgct tttgcatgtt ggagtaacat
    16141 aaaatcaaca gcatcacgcc cgccatcgat atatttgact tctacatgcg aaggaaaatc
    16201 atgaacagta aaatgactat aagtgcgaaa taaatataca aaaatgcctg tctcagccgt
    16261 gattctaacg atggaatcga cgactggaca agcatcgcca tctattaaaa tgcgcattta
    16321 tcgtccttgt ttcttcattg attttttaga tgtgtcattt aactgttggt tttgtcttaa
    16381 tatgtcgctg tcttgcactt ggcgctccat attttgataa tgttgttcgt ataaaggtgc
    16441 gttgtctgat gttgtttcga cttgacctgg tgcacttggt gtcggttgac ttttgccagt
    16501 atgactttgc gtcgtttgaa gttctgataa cgtcgtaata cgttgttttt cttgttgctc
    16561 attggattga accgtgttgt tttggtttac cgaacgtttt gtaggagctg catctgtcgt
    16621 atgtccggcc ttttcttcat gttttttcat gtctttcata tttttcttta acgctttttc
    16681 acgtgcttta gcaacttttt cttctttctt atgacgttct tttaggtgct tttttaaatc
    16741 cttgttcatt ttgtcaactt cttttttgtt gcgcttttca attttttcag cacgtttctc
    16801 agttttagca tcgcgttgtt ctagtgaatg cccgactttt tcttcatatt tttgcatttt
    16861 tttcatagtt ttaatcattt gcttttgacg ttgattaaac gctctatcct cttctttatg
    16921 gcgttctgca atgtgctttt ctaagctttt cgctaacttg tcaatttctt tacggttttc
    16981 tttagcgatt tcttttccac gcgcacgcac attttcagga cggttgtaac gttggatttc
    17041 agcttctttt ttcatcactt tattgtaatc atgacgacgc tttttagttt gaatggtgct
    17101 ttttaaatga cttgatcctg aaacaacaga gtctttcaca gaattcgcaa cttgaccggt
    17161 tttatgtgcc acagttttcg aagtattcac tgttgtttgg gtcacttttt ggacatcggg
    17221 atgtgcttta aattttttgc gttctaagat gagtggtacg agaaatacag gtaagacatt
    17281 gactatcatt ttaattgttt tattcatgaa cgttgcctcc aattatgagt atacttatga
    17341 ttttttaccc tttcagccgt ctcgataaac gctaaatggt gaccttgcac tatcgcgcac
    17401 gtcaaaaatc gataagttga gctcgttacg tattgtatga ttattgtaca ttgttttgat
    17461 ggaaatttaa aaagtgaact cggttttttg aagtttctaa aactgtgaat aggtgcactc
    17521 aagtgtgatg ctgatgtcga catgaccttt tcactatgag ttctcatgca aatgactgaa
    17581 tcattaatgt atgtatcgtt aaactcggtg gcagtattga aaagataaaa aaagcgggga
    17641 tagacacgca atggtcttaa cccctttctc atatgttgat gcacttcaat tatttaataa
    17701 taccgaaata aacgacagca atcacgacga caagtacgat tcggtaaatc gcaaatggta
    17761 ataatttaac gttttgaatc aatttcaaga acagtttgat tgaaataaaa ccgaatgtga
    17821 aagctgctaa gaaacctaaa atgtagaatg gaatatgtgt caattcgata taatctaaat
    17881 gtttaataat cgataaacca cttgctgcta acatgacagg cactgccata atgaaagtga
    17941 agtcagaagc agatttatgg tctaacttca tcaatacccc tgttgaaatc gttgaaccag
    18001 aacgtgaaaa tcctggccac attgcaacgg cttgagaaag accgatgaca aaagcttgga
    18061 aataagtgat ttcatttaga gtttttgggt tttttacgtt aagactgaac ttgtcggcaa
    18121 taatcatgta aatcgcacca aggaataaac cgatgagcac agtcggtacg ctaaataaat
    18181 atttttcaat caaatcgtcg aataatagac cgagcacccc tgctggaatc atcccaataa
    18241 taatgtgtaa gagattcaaa cgacgcggtt ttgaacgacg gccaggctgt tgcgctggtg
    18301 catatttacc gatatgtaac atttcgaaat acttgtgacg aaaaatccat gccgcagcaa
    18361 aaatagaacc gagttggata acaattttaa aggtgaaagc agattctggt cctaaaaaat
    18421 cagtcgattt caaccacata tcatcgacta aaatcatatg tccagttgaa gaaacgggag
    18481 cgaactcagt catcccttca acgataccaa gaataatggc tttaattaat tcgaaaaata
    18541 acatagaaga accctcttta atcatttttg tgtaaatttt aatataacat agcatatgat
    18601 agcatattct catttaagat gtctttttct aacataaatt tattgaaata taggtcttga
    18661 gcagtagaag ttgcaacatg tatataaatt tgaaaatggt gccagtgtgt ctttaattga
    18721 aagatttcag acaaaaaatc gtcgaatttt ttcacgtgaa agggatagag cgaccatgta
    18781 aaatggagaa atgacacata caaatggagg cggaaatcaa agatgaaaca attacatcaa
    18841 tgggcgaaac aattttatag cttgcccata tttatggcta tcgtttgtat cggtcttgcg
    18901 ctatcagtcg ttgctcaaaa tgtaacgatt ggcatcatat tagaacatat tctcacacat
    18961 caacctacag catggtctgt catgattggg tttttagcgt tggtgctcat attacgtgca
    19021 actttagatt ttgtgaatgg atggctaggg gaacgtctgg cacatcgtgt tcgacagatg
    19081 attcgagggc gcttattaca tcaagtgtct cgccaagctg ttggtgaaag actgacgatg
    19141 gcgacggaaa ccttgtctga aatgttgccg ttttatcgca attatttacc tcaagtattt
    19201 aaatcgacat ttatccctct tgccattatt gtaacgatgc tttttgtgca tatacccacg
    19261 gctttaatta tgctcgttac ggcgccattt attcctgttt tttatattgt ttttggtctg
    19321 aaaacacgtg atgatgcaaa aaatcaaatg acatttttaa atcaatttgg tcaacgtttc
    19381 ttaagtttga cgaaagggtt agttacttta aaactgttta accgttctga acaagcagtg
    19441 gaaacgatta gtgaagaaag tacacaattt cgtgataaga caatgacaat attaaaaagc
    19501 gcatttttat ctggcttaat gttggaattt atcagtatgt tagggattgg tttagtcgct
    19561 ttagaggttg ggttaagctt gattgtattt caatcgatac atttcggtac agctgctatt
    19621 gcgatgatta tggcgccgga attttataat gcgattaaag acttaggtca agcctttcat
    19681 acaggaaaag aaagtgaagg tgctagtgac gtgattcatg cagcactaga aaaatgtgag
    19741 gtggtgaccg gtcatgaaat cagtgtggat gaaaatcaaa caccactcat tcaagtacgc
    19801 aaccttcaat accactatcc caatacgacg tctaatgtat taacggaaat gcatctcgac
    19861 atttttgaag gcgaccgtat tgcattagtc ggaccaagtg gtgcaggtaa atccacattt
    19921 gttcgcttgt tgattggtga actgttacca caagaaggcc gtatcacgta tcaaaggcaa
    19981 gatttgaaaa taggctacct ttctcaaaat ccgtatattt ttaatgcaac gattgcagaa
    20041 aatgtcgctg tatttaatga cgttcctact gaaaaaatta ctgcggcatt ggaagcggta
    20101 cagttaatgc ctgttgtcca aagatttcat tatggcattg aaacgttgat tggtgaaggt
    20161 ggcgaaatgt tatctggtgg tgaaatgaga agaatagagc tcgcgcgact attattgtta
    20221 gaaccagatt ttgtcgtttt agatgagcct gtcgcaggat tagatagcac aacggaacaa
    20281 gtgattcaac aaacattaga ccgctatttt caacatgcga cacgtttaac gattgcacac
    20341 cgtcagtcta caatccagca tgcgacacga cggatttatt tagcagatgg tacgattcag
    20401 tctgatgatg atcacattca actttcgtta acacatacgc aaaatggagg tgaagaataa
    20461 atgaaactcc aacaagtgat taatattaag tgggataagg atattgtgat ggcgatttgt
    20521 atcggtgtat ttggaagcct tgttgcactg agtatgttct ttttaagtgg ttatatgatt
    20581 actcaaagtg ctttaggtgc gccgttatat gctttaatgg gcttaattgt aacggtaaaa
    20641 ttatttgggt ttatacgggc tataacgaaa tattatgaac ggttgcgctc tcaccgtgcg
    20701 acctttacga tgttgagaga tgtgcgggtt cagctctacc gtgcgctcat cccaattgta
    20761 ccggatgttt ttcggaagtt tcgctcgagt gatttactcg gcagaatggt cacacaagtg
    20821 gaagcattgc aaaatatata tttacgtgtc tattatccac ctattgtaat tgggatcacg
    20881 acgcttattt cagcagtgac tttagtctat ttttcatggg cacatgccgt cgttttaatc
    20941 attacaatcg caattgcttt gttcattttg cctgcattac gtgtgaaaca gtcgacacgt
    21001 gtgcgactgc atgtgaatca aacaggagcg cgctggatgc atgcttattt tgactacatt
    21061 ttaggtcatg atgagttgaa acgatttaag agtgataaaa aatataatgc acaattaatg
    21121 gcttctgaag cggcattcag ccaagccgag cacctgtcgc aaaagagtca cctcgtttat
    21181 gattatatac gacatttaat cagtatggca gcattactcg gtagtatcgt gctcgttgta
    21241 gtgatggtcg aacaacaaca agtcgatatt gtctatgtga cgagcattat tttaatgatt
    21301 ttgacattat tagaacaagc tgtgccgatg agtcaagtcg ctgattataa aagtgagacg
    21361 gatctagcac agcaaagctt atcagaagtg atggggtatc gtaaaagagc ggttggaaaa
    21421 gagcaggtag atgttcatca aatctctcat gatgcgccac tgttaacgtt gaaagatgtc
    21481 acgttatgct acgaacatca acagcgccca agtgtgcaac atttaaatct acacatccat
    21541 aaaggtgaac acatcgccat tgttgggacg tctggttcgg gtaaatcgac gttattacaa
    21601 ttgttaatgg gactgtatac accaagtgaa ggtcaaattt taataggtga tcatgcacta
    21661 aatgatttag atatgataca ttactatcaa cagttaaata cgatgttgca acagccgcat
    21721 ttttatgacg atacagtata tggaaattta ttgactaatg cttcaacaac tcaatgtcgg
    21781 actgtgttgg atcaattgca cttgcaacat attgcgttag atcgtccagt aacattcaat
    21841 cgaaatacat tgtcaggcgg agaatttcag cgattagcac ttgcgcgtct catgttacga
    21901 gaagcttcga tttggctact tgacgaacca acaaccgcgc tagatataga aaatacaaaa
    21961 gatgtaatgc gtcaaattca ccaacaagct gaaacactgg tcgttgcaac acatgatgta
    22021 caatatttag cgcagtttga tagaatcata cagatgcaag aaggaaaagt gattggagac
    22081 atgacaccag aacaattttt agctgaaaaa gttcatgaat agacgaggca ttacaaatgg
    22141 tataaaaaat gaataagtta ttgtggaata gtgaaagtaa gtttgttgaa ataaacaagg
    22201 aacaactggt tatatcggat gagaggtgtg aaaaaagcgc tcagaatgtc gttggagggc
    22261 attcaagcgc ttttaaatga tgattatgta tgtatagata aactaaggtt gtatcagtca
    22321 aacaaaaaat ggtatgctct caatatagtg tcataacatc aataacgtta tagatataaa
    22381 tatcaatcac acgggccccc aatactttca tcgtgtaaaa attgatattg ttcccctgaa
    22441 acaagtctat ctatatcaat acgaaaacac tgcttatgac ttagaagtag tgactgattt
    22501 caatcgttta cttactttca tcaaaagctg taatcacttt ttctaataat cgagttagtt
    22561 cgtttacttc gtcaggtgtt aaagatgaag cttctgcaac ttgttgagat gcatttgcta
    22621 attctggttc cattgcttta ctcttctcag ttaaatgaac aaatacttcg cgttggtcga
    22681 tttcagaacg ttctctttta atcaagtcaa tttgttccat acgttttaat aaaggtgata
    22741 cggtccctgt atcaagggct aagtctgtta caactttttt cacatttaca ggggattggt
    22801 cccataaaat ctctaaaact aaaaattgcg gatacgtgag cttatatttt ttgaaaatct
    22861 tgtttgaata atagcggtta acttgtcttt gtgcgttata caaactaaaa catacttgct
    22921 cttttaagtt taaatggtca gacataatta gttctcctcc agacattcta tccgttttct
    22981 ctttttctat cacgaatggg aatccgtcca taatcaaatg atttaagccg ttctcactta
    23041 aatctatgct atgctatcct taaaatatag catgcagtaa ttttagaaga taaagcgtac
    23101 tttatcaagt ttaaagtcag acatacacat atattataac agatttgtag attttttgag
    23161 agaaagggtt aaatttatgt ttaaaaaaca aacatcgctc atattgatac atggatttct
    23221 cggaagtggc aaaaccacat tcttaaatca ttatatgacg caaatattaa aaaaagatga
    23281 gaaagttgca ctcattgtaa atgaatttgg tgattttgat gtagacagtc atcttttgag
    23341 tcaatatcat gtacaacaat cagcattaca aggatgtatt tgctgtgata ttcaacacga
    23401 tttaattgcg catttgtacc aattaacacg tgatgcagaa gttgattata tcattgtaga
    23461 agcgactggt gttgcgaatc cgattgatat tttggttgcc tgtcaagacc ctttattagt
    23521 ggatgcattt tcatcaatag aaacgatagg cttggtggat agtgtcagat ttataaaacg
    23581 acatgacaat actgcacaaa cgaaagcttt aatggaagat caagtccgtg cgagtcaaac
    23641 gatactggtt aataaagtgg atttaataga agatgacgca caacttcaaa tggtgattga
    23701 agatattaag gcgctatcac ctaaaagtcg tatcgttctc acacaatacg gtgaaacatt
    23761 gaaaacaatt gaaaaaggtg caaatgcaca aaatgtcgat gtgacagggt ttcatagtca
    23821 tacacatgca cattatacga gcttacaata tcaattcaat agtgcagtct ctcaagaagc
    23881 acttgtccaa ttcattttaa ggctacctga caatgtattg cgattaaaag gctatatccg
    23941 tttgcgcgaa cagtctgatg agattttctt aattcaatat tcagaagggg tgcccgctat
    24001 tgaaagtgta ggtcacttga cgctcccaac ttctattatc atcataggcg agcaattaga
    24061 taaggccatg ttaagaaatc aattggatat gttacaattt acttaattct ggattattca
    24121 aggggtgttt aaatggatca aatcactatc aatcagcatg tgaaatattc tagagtcata
    24181 caaggttttt ttcgagcgca tcaatggcag aaatcgacac aagctatgaa tcgtttcatt
    24241 catgaacttg ttgagcgtgg cgtgacaaca atggaccatg ccgatattta cggacattac
    24301 actgtggaaa aaatgtttgg agatgcattg gctttgtcac ctgaactgcg cgataaaatt
    24361 caaatcgtaa cgaagtgtgg aattgtcctg ccgaatcata tttatccaga gcaaaccgac
    24421 catcgttatg acttaagtaa acagcatatt aaacgtgcag ttgagcgttc attaaagtca
    24481 tttcaagtag agtatttgga tagtttgttg attcatcgac catcgccgct aatgaaaccg
    24541 tgtgaaatca ctgatgcttt aaaagattta gtccaagagg ggaaattgtt gtcatttggt
    24601 gtatcaaatt ttcagcgccc acagtatgaa ttattaaatc gttgtttgaa agacgacaaa
    24661 tttcatatcg cagtgaatca aattgaaatt tcaccgtatc atttagaagc gtttcatgac
    24721 ggcaccattg atgatatgta tcgtgaaggt gtgaagttaa tggcttgggg accgtttgca
    24781 ggcggacgtt tatttgatga aaatgaccca gttgcagcac gtgtccttcc agtaataaca
    24841 cgaattgcaa aagcacacca tacttcagtc gcagcggtag tgtctgcatg gtttaaaaag
    24901 aatccagctg atatcatgcc cattattgga actgaacgac tcgaacgtgt tgacgaagtg
    24961 attgatggac tccaacttga attgcatgac caagaatggt tcgatatttt tactgctgca
    25021 caaggattcg acattccata aaattgtcac atctcatgga agtcaacgta cagcaaactt
    25081 tagtacaatt aaacgtgatt attaggaatt gagagggaaa aatatgacag aagaggaaaa
    25141 aattaagcgc agtcgtttca aacgtaatgt tattgcgata ccgtacatca tctttggctt
    25201 tatcgttgca ttactgttta tcttttcacc ggatatcatt tggctcgtca ctatttttgg
    25261 tatctttatg gtgtataatg tcatcgcgat gtttattgcc tttttattca aatatgggcg
    25321 cactgcattg tatttgttga tgatgacctt attgatggct ggtgcatttg cgctttatct
    25381 ctatatgcta cttgaatttc attaggtgaa atatgcacac gtttacatgg tgtccgtcca
    25441 tgtaggcgtg ttttttcggt
//
LOCUS       DANHPA010000026        25325 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.026, whole genome shotgun sequence.
ACCESSION   DANHPA010000026 DANHPA010000000
VERSION     DANHPA010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 25325)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25325)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25325
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.026"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(28..797)
                     /locus_tag="PTC28_000866"
                     /pseudo
     CDS             complement(28..797)
                     /locus_tag="PTC28_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169168.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
     gene            complement(869..1072)
                     /locus_tag="PTC28_000867"
     CDS             complement(869..1072)
                     /locus_tag="PTC28_000867"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716179.1"
                     /translation="MTDISFLEPGLYLSVIHLEDDEIILYVHYDSGMLCSNTGTDSGV
                     AVKLNVTQHAFQSFIDELTGIVK"
     gene            1207..1539
                     /locus_tag="PTC28_000868"
                     /pseudo
     CDS             1207..1539
                     /locus_tag="PTC28_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166937.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            1720..2112
                     /locus_tag="PTC28_000869"
     CDS             1720..2112
                     /locus_tag="PTC28_000869"
                     /inference="COORDINATES: protein motif:HMM:NF012870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HDK5716180.1"
                     /translation="MTKALVISALNKAYTIQEPREGLIHHSDRGSQYASIEYQNLLRE
                     EGIQSSMSRIENCYDKACIASFHSIIKKELIYHQNYKIRNGAMYSIVAYLLTFYNSKS
                     VHSTLNDMSPIEFEKKYATKSPSPTCTF"
     gene            complement(2338..3540)
                     /locus_tag="PTC28_000870"
     CDS             complement(2338..3540)
                     /locus_tag="PTC28_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5716181.1"
                     /translation="MSIKTASLLLFNSVSSVGSRIFSFACAFYILQHTDSTALFTLYL
                     TAIVISTLVTEPLLGLFAGRYHNKMMVIMIQLLNVIFLFVFTIVFDMFFNYIIILGIM
                     LNMTDATIRMFIDANVNHIIKGDVERYTLSTLTTNTAIHFLAPIIGGMMIAFFNIETL
                     ALLNLITEALAVLFVLNLPLDKEVKFENKQMKKSLREGYRYLKQQKALKHFFIIMVAL
                     HFLVAVFSIGMPIAAVQFMQLSAPQYGVVVAGFTVGMVAVSVWLGMNSEKDNLKSTYE
                     RAMLLQCVTVLILGVMVVFQMNTAVAMLLLFILNGLMGLSQPLAIIPTSNYLQEAIEE
                     KYRGYVMTFKQTLLDISYPIALLFFGVVLNHHQAVVYFVVTVLIIVLYIYFSFIMRKG
                     FRIVRGRH"
     gene            complement(3766..4656)
                     /locus_tag="PTC28_000871"
     CDS             complement(3766..4656)
                     /locus_tag="PTC28_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDK5716182.1"
                     /translation="MEPIKHIHHISAIVGHPKENKDFYEKVLNLRLVKKTVNFDDPGT
                     YHLYFANDNVDPGTVMTFFPWANAYKGRVGSGQVGRIAFRIPKNSKDYWVQHLNDNNV
                     ETTETELFRRPTIEFEDIHGLDLALVESDEESDTNKILGFHGSVLLSLRPVETLKELV
                     DDLGLTELEHDADHFHFETAGDLKHHIIIPKKPLPEGRWGVGTVHHIAWSVDNDEQHL
                     AWQKYLMSQGYHVTEVKDRNYFKAIYTKERGHIIFELATIPPGFDRDEPKDQLGQKIM
                     LPPQYESQREQLLANLPELD"
     gene            complement(4672..5115)
                     /locus_tag="PTC28_000872"
     CDS             complement(4672..5115)
                     /locus_tag="PTC28_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(4Fe-4S)-binding protein"
                     /protein_id="HDK5716183.1"
                     /translation="MVKQYTGENINVYFEPKRCVHATECIRGLGEVFDVEKRPWVQPD
                     NAAVEDVIKVVERCPSGALTYELPSNQQETHPETRVAYGDDGEIFMYGDFTLVHNGEV
                     MHLNRAILTSDASNTDNPPFYSKSFSGQGDKEQFYKPIQDEQFEK"
     gene            5261..5746
                     /locus_tag="PTC28_000873"
     CDS             5261..5746
                     /locus_tag="PTC28_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716184.1"
                     /translation="MEGQIIPGVGTKYSLTTANNDIVHVILHYNGKREIYITDEDEDV
                     LANIGLNETEAREIALKLMDVNHDTMEKQAFERFSLLRKQMLVDWIKVSQLSPLKGIN
                     IEEAEHRVPNGVNIVGISRGSDIIAKPESTELIHEGDILLVIGYNEAVSEFEAVCRPE
                     G"
     gene            5752..6924
                     /locus_tag="PTC28_000874"
     CDS             5752..6924
                     /locus_tag="PTC28_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDK5716185.1"
                     /translation="MHLFDLSELLLSGLLIFLLFISAFLANRISAPDIIIFLLIGIVL
                     AFFVSHSEILEFAAETGIVLMFFMLGMEFPIKQLKDLALNIYKAGLLDLLLSFGVTVI
                     LVLIMGQPIEIALLLGGVVYATSSSITVKLLEKNNRMTTKDSNFILGLLVFEDIVSPL
                     LVTIIASLFIGEALSATSLSFVFVKIVLLLVGAILLGQVVFKKLGAFVEKYVSEDFFI
                     LFMVGLSLTYAGIAIQLGLSEVFGAFLAGIMVAETRKINLLQQSVRNLRDLLMPIFFI
                     NFGLSIQLTSGISMVNVLLVLIVWSVISKIIVGYVGGKQFGLNNVPAMRAGLSFTQRG
                     EFSMIIAGFASTQIKTLSGVFILISAIIGVTLFQFAPKIAKRLFKKEKKASLPGSV"
     gene            7357..8454
                     /gene="ugpC"
                     /locus_tag="PTC28_000875"
     CDS             7357..8454
                     /gene="ugpC"
                     /locus_tag="PTC28_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HDK5716186.1"
                     /translation="MPELKMSHVKKVYDNNNAVVKDFNLDISDKEFIVFVGPSGCGKS
                     TTLRMIAGLESITGGDFYIDGQRMNDVEPKNRDIAMVFQNYALYPHMTVYENMAFGLK
                     LRKFDKAEIDKRVKEAAEILGLTDYLNRKPKALSGGQRQRVALGRAIVRDAKVFLMDE
                     PLSNLDAKLRVQMRTEILKLHHRLNTTTIYVTHDQTEALTMATRIVVLKDGHIMQIGT
                     PREIYDTPDNIFVAQFIGSPAMNMIDVTVTAQGIQIGTKLFKLAHKKFEKLKEKGFEN
                     QTVTLGIRPEDIHEEPIFIQASPETAFESKVIVSELLGSEIMVHTQFEQHEIVAKLDA
                     RTKVSAGETLTLAFDMNKCHFFNPATGNRIV"
     gene            8467..9726
                     /locus_tag="PTC28_000876"
     CDS             8467..9726
                     /locus_tag="PTC28_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HDK5716187.1"
                     /translation="MNKMLKAALLLITVLVVLTACGPNRSQKDIESALNRDNRKEKPE
                     QLTMWVDGDAQMAFYKKITVAYTKKTGISVRLVNVAQNDQLENLSLDAPAGKGPDLFF
                     LAHDNTGSAYLQGLAAELDFTDEQLKGFNKQALRALNYDNKQLALPSIVESTALLYNK
                     KYVKTAPKTIQEVEANADRINKPADHQYGFLFDGRDPYFNYPFMFNSNNYVFKKHGDQ
                     YDVHQTGINDPQVIKNGKRLQKWYEKGYLPKAANHNIMIGLFKDGQVGQFVTGPWNLT
                     EFQQTLGDDLGVTTLPSDNGMKMRPYLGVRGWYLSEYSQSKYWAKDLMLYLTSRDTLQ
                     KYTDERNEITGRLDVKSSNPNLKAFEEQAKNAEPMPNIPEMRQVWTPMANASTFISEG
                     QDPKQALEDANRDIQQNIKILQPNDNE"
     gene            9741..11009
                     /locus_tag="PTC28_000877"
     CDS             9741..11009
                     /locus_tag="PTC28_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HDK5716188.1"
                     /translation="MNQRNAKLAAMLSIIPGLGQCYNRQFVKGICCTIFFISFISVFY
                     QFFNIGFWGLFTLGTVPKLDDSRVLLAQGIISVLLIAFALTLYIVNIIDAYRTAERFN
                     RGEEIKDPKARRIAAWDKTFPYLLISPGMFLLVFIVVFPLLFMGAVAFTNYNLYNAPP
                     RHTLEWVGFDNFKTLFTIDIWRHTFFSVITWTIVWTLVATTLQIALGLFLAIIVNHPL
                     VKFKRFIRTVLILPWAVPAFVTILIFAALFNDEFGAINNTILQPLLGVAPAWLNDPFW
                     SKVALIAIQTWLGFPFVFALFTGVLQSISPDWYEAADIDGASSWQKFRHITLPHVLFA
                     TAPLLIMQYAGNFNNFNLIYLFNEGGPPVPGQNAGSTDILISWVYSLTFEFNNFNMGA
                     VVSLIIGFIVAIIAFLQFRRTSTFKDEGGI"
     gene            11011..11850
                     /locus_tag="PTC28_000878"
     CDS             11011..11850
                     /locus_tag="PTC28_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HDK5716189.1"
                     /translation="MNQKKKVWKAIGIYGFIAFMFVVILYPLLWTFGISLNPGTTLYG
                     AKMIPDNATFANYIYLLTDENSQYLTWYKNTLLVASANALFSVIFVTLTSYAFSRYRF
                     VGRKYGLITFLILQMFPVLMAMVAIYILLNTIGLLDSLLGLTLVYIGGSIPMNAFLVK
                     GYFDTIPKELDESAKIDGASHMRIFFQIMLPLAKPILAVVALFNFMGPFMDFILPKIL
                     LRSPEKYTLAVGLFNFINHQYANNFTVFAAGAIMIALPISIVFLFLQKYLVSGLTAGA
                     TKG"
     gene            complement(11902..12273)
                     /locus_tag="PTC28_000879"
                     /pseudo
     CDS             complement(11902..12273)
                     /locus_tag="PTC28_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166788.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(12418..14064)
                     /locus_tag="PTC28_000880"
     CDS             complement(12418..14064)
                     /locus_tag="PTC28_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000415199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase"
                     /protein_id="HDK5716190.1"
                     /translation="MARQWWKEAVAYQVYPRSFNDSNGDGIGDLRGLIEKLDYLQELG
                     IDVIWLSPMFPSPNADNGYDISDYQAISETYGTMADFDELLEKVHARGMRLILDLVVN
                     HTSDEHPWFIESKQSCHNPKRDWYIWRDPATDGSEPNNWESIFNGSTWKYDETTNQYY
                     FHLFSEKQPDLNWENPAVRDEVFNMMNWWFDKGIDGFRVDAITHIKKSFEAGNLPVQE
                     GQQYAPAFDVAMNQPGILTWLREMKAKSLSYYDIMTVGEANGVNPDDAENWVGSDKGV
                     FNMIFQFEHLGLWDNVASRLDIKAYKHVLNRWQKQLENIGWNALFIENHDQPRRVSTW
                     GDDQQYWYASATSHALVYFLQQGTPFIYQGQEIGMTNYPFTDIEQFDDVSVKNEYRIV
                     QEAGGDVDSLLEKLRMDSRDNSRTPMQWDANEHAGFTTGTPWFPVNPNYVDINVAQQE
                     QDPKSILNFYKELIRLKKSDDIYTYGQFDLVDADNGQLFAYTRSLDGRTVVIIGNLSE
                     EVASLNTDLKLNEGEVLLHNHEGAVDFNAMRPYEACVIEL"
     gene            complement(14111..15079)
                     /locus_tag="PTC28_000881"
     CDS             complement(14111..15079)
                     /locus_tag="PTC28_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HDK5716191.1"
                     /translation="MKLGVFSVLFYDRDFEQMLDDVAAAGLDMIEVGTGGNPGNKFCD
                     LDALLADENERQIFMDKIHQRGLEVSAFSCHNNPIAPDEAEAKEADETLRKTIQLAAL
                     LGVPVVNTFSGIAGSDDSAKYPNWPVTPWPTAYSEIYDYQWNQKLIPYWQDLAVFAKS
                     HDVKIAIELHAGFLVHTPYTLLRLREATNEYIGANLDPSHLWWQGIDPIAAIRILGQA
                     NAIHHFHAKDTYINQDNVNMYGLTDMQPYQQVATRAWTFRTVGYGHSPYEWGEMISQL
                     RIHGYDYVLSIEHEDPIMSVEEGFHKAVENLKSVNIYDQAPDMWWA"
     gene            complement(15095..16135)
                     /locus_tag="PTC28_000882"
     CDS             complement(15095..16135)
                     /locus_tag="PTC28_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDK5716192.1"
                     /translation="MKPLKIGVIGTGGIARDRHIPLIQQHERAELIGVYDVNEALARE
                     VATQFEIAYVAPTLEALLAQVEAVIICTSNKFHADLTIAALDAGVHVLCEKPMAMTTA
                     ECDAMMAAAQRNARILTIAYHYRFTDVAQAAKQAVAQGAVGVPVVSRVQALRRRKVPG
                     WGVFTNKALQGGGCLIDYGCHVLDLVLWLLEDAQPTEILGRTYNALSRQPQQLNEWGT
                     FDYKTFDVEDHATSYVTFENGASMQFECSWAANIHHDKLDVSISGDAGGLQLFPFEMY
                     APQSDGYHILEQDVSLNEGVAASRQMDHFIRSCFGEVEPLVKPEEARRVTQLIDAIYQ
                     SDRERQSITIQG"
     gene            complement(16157..17233)
                     /locus_tag="PTC28_000883"
     CDS             complement(16157..17233)
                     /locus_tag="PTC28_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDK5716193.1"
                     /translation="MGIKVGIIGCGGIANGKHLPSLAQIDDVEIVAFCDIDIEKAKIA
                     ATTFGTVNAKVYQDYQELLKDQTIDVVHICTPNYLHCDMTVHALEANKHVMCEKPMAK
                     TTVEAQQMLDAAKRTGKKLTIGYQNRFRVDSQFLHQVTARGDLGDIYFGKAHAIRRRA
                     VPNWGVFLDEEAQGGGPLIDIGTHALDLTLWMMNNYEPAAVMGSTFHQLSQQENAANA
                     WGPWNPKDFTVEDSAFGFIKMKNGATIILESAWALNSLDVDEAKCSLSGTKGGADMKD
                     GLRIHGEELGTLYTKHIELDNKGVDFYEGETVDEALEEAKAWIDCVRNDIPPRVKPEE
                     ALVVTQILEAIYESARTGKAVYFD"
     gene            complement(17418..18398)
                     /locus_tag="PTC28_000884"
     CDS             complement(17418..18398)
                     /locus_tag="PTC28_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDK5716194.1"
                     /translation="MVSVKDVAKLANVSTATVSRVLSNTGKVKPKNQQRVLEAAKALG
                     YHPNNIGRQLRKMETMTILVVVPDITNSFFSAILRNIENIAREHGYEVILGDTQNQQG
                     DTYFSYLYEKKVDGMIVLTSYLDLENLEKVSAQYPLVLACEQIKEINVPSVSINHIEA
                     SALMTRHLIEAGHTKVGHITGPLDGILGQYRLQGFREAMDSHGLTVRDDWVIEGDFSL
                     ESGYRIGKQLLEQAEMPTALFVANDEMAIGIMKELKKHGKRVPEDMAIVGFDNIILSE
                     IVDPGLTTYAQPATEIGIRAMEKLLVLLKGEDLEERDTLLEGELLIRQST"
     gene            18697..19938
                     /locus_tag="PTC28_000885"
     CDS             18697..19938
                     /locus_tag="PTC28_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_100495228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyltransferase"
                     /protein_id="HDK5716195.1"
                     /translation="MYFTQLSVDDFDAFVTNHFSHYTQDAGHYHYRNKYKNDVHLVGV
                     KNDQDEVIAACLLTEARALKFFKYFYTHRGPVLDYNNLELVQFFFEHLTQYLKKQRCL
                     YVLIDPYVHNHIRDAKGNITQHFEHAQLFKTLDRLGYKHQGFPIGYSSHSQIRWLSVL
                     DLKDKSEQQLLEEMDYQTRRNIKKTYEMDVQVKTLPIEETERFFKLFQMAEEKHGFTF
                     RDLPYFEEMQKMYAKNSMIKLAFIDLDGLLKKQTEKLDTLKATIAETQAALESHPNSK
                     KNKTKLKQTEQQLQAQERKIEKTRQLIVEDGEILDLAAAIYIYNRHEVYYLSSGSNPK
                     YNAYMGAYRLQWDMIQFAKQQGIDRYNFYGITGDFTKHAEDYGVQRFKEGFGAHVEEY
                     VGDFVKPIMPMMYRCARLLKR"
     gene            complement(20266..20391)
                     /locus_tag="PTC28_000886"
                     /pseudo
     CDS             complement(20266..20391)
                     /locus_tag="PTC28_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002458050.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(20402..20683)
                     /locus_tag="PTC28_000887"
     CDS             complement(20402..20683)
                     /locus_tag="PTC28_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716196.1"
                     /translation="MSYVVGISFTILILLTGFWFIIFNRHQPIIFFFPDKARTNILTG
                     RSFLVLSLVYFIIVIILPVRISTMLLLYIGLTVLDLIVMYLLLKLEVIE"
     gene            complement(20885..25207)
                     /locus_tag="PTC28_000888"
     CDS             complement(20885..25207)
                     /locus_tag="PTC28_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YPDG domain-containing protein"
                     /protein_id="HDK5716197.1"
                     /translation="MNKSRTKHFNFLSKRQNRYAIRHFSAGTVSVLVGAAFLLGVHTS
                     DASAAEQDQTSEAKQNLFDASAIFGALTETNEKVAQVTPTEKNLSSVEEMRDKVATGN
                     GPSITSPQTVEQNNAVQPTATPINDTENSTEAPMKEQSNDAQTTDESNNVTPKNNTDP
                     EANNEISARNAKTTAYLTSETYTTATSTTDMPTQKQEYPSLENLTNQSQTNRAQPPTM
                     EAPKLAEGLDNLLKKSTFESMYVTTRNQFDKETASKTKAWPSDVVPENQVEILADAIQ
                     NGYIKSVNDVTNKAHTLSGRAWMLDHGTPTTIANGLTPVPEGTKVYLRWIDQDGATSP
                     IYTAKTTSRLSAADGNQVGPGAYAFDLRTGWIDAKGKHHVYRAVKGQYYKIWINDFRT
                     KDGNIATMLRVAGGYVPGTYVDSVTYNNMGQFPLIGTNMQRTGIFMTTIPSEQYLISK
                     HYVKDTKGAAANPAVTIIENNFVSGKVWIETGAGDYVNSATGPNHNAKDVVASGYKVV
                     MSSLTDQGAKAYDAQVNRLPKKDRAEAARQLLIKHPEYIAATVEGITNEWGRYTLRFP
                     KGTFNKDHLYGYVLDFDGEIVKTYSSFTSPEFRKPNYNLTVTPQTAPYYRPIRRAWVN
                     VNFAVIEAPQSQIEIKEFDATSNPAHRGQTATIDIIGMPKTSLLTRVQWKDSSGSIVE
                     DSGPVFTEEEAEHIAEFVIPSSAKSGEVYTVQLVVGNHIVASDSLIVHVNEEAATYHP
                     IYPSTTVESGQRVTIPAPKNMDGKPLLDGTTFEKGHHVPTWALVNGDGSITVKPGEKV
                     AEGEYDIPVIVTYPDGSKNTIFAPVTVEEKQPMASQYEPITTGVSKPFGNPVMPTDVT
                     DSIQVPNYPLEGQQPTVTVDDESQLPDGTTEGHKDIDVTVTYPDGTRDHIKVPVVTEQ
                     QLDSDKYDPVATGILKPFGTPTTEEDVIKLVEIPKYPTDLTQPKVTVTVPNTLPDGQT
                     PGKVDVDVTVTYPDGSTDHISVPVWTNKHLDKDKYNLITTGVSKPFGIPVMPTDVTDS
                     IQVPNYPLEGQQPTVTVDDETQLPDGTTEGHKDIDVTVTYPDGTKDHIKVPVVTEKQP
                     DNEKYEPTTNGITKKYGIPTTEDEVIDIVRIPYFPVDGVQPIVTVNDPRLLPNGQKEG
                     QINVPVTVTYPDGTKDLMTVPVFTGKQAENEKYDPITLGVTKDYGDPTTANDVTKSIQ
                     IPTYPAGGEQPIATADDESQLPDGTVEGKVDIPVTVTYPDGTQDHITVPVFTNQQRDN
                     QKASKAVTKIHGISVTGTDMTDTKKNHNYPAGGEQPKVTVKDDDQLSEGKVDSTVGAD
                     NVTTTDDLSSVTAASHGHQTSVQTTKENQSVHDEEVTIPTVAHVSTIMTGVVKGEQEA
                     TDIVARPHVETTRLPSISARATVKQLPETGENNEQSGVLLGGFIAFMGSLLLFGRRRK
                     PKKD"
BASE COUNT         7386 a         5341 c         4510 g         8088 t
ORIGIN      
        1 tgacacatct aaactaatat ttaatcatca actaaaattt gaagatgtct cctctaaatt
       61 tttaggtgta tatgcaatac atttatatga gtctagtgcc atatttttct taaatgccaa
      121 ataagcaccg aaacaagcta aaactgataa ataaaggaga cctatccaaa attcacgtct
      181 gtatgaacag tataatgtcg gccttggatt aacttataaa acagtaagaa tagaacagct
      241 cccaccatac caaacgcatt tgcaagaacc ggatgcatcc ctctgttact attgaacaac
      301 gacaagacat cccctacaaa agtgatagtt gttccaaagg ttgccatcac aatgcccata
      361 atgaactcgc tggacaaatg gttcaaatcg ggagacaaaa tcaccatgac gctgagaatc
      421 cctaacaaac ctccgatata aattttaggg gcgatagact ttttaaatac aatgctaatg
      481 agaactggtg tcaaaataga ttccattaaa aaaatgagcg tcacaatggc tgctgtacta
      541 taaaacgtcc cgtaatagag caacaaataa ctcacagtaa aattgcaaag gccgaaacct
      601 accactgtta accaattcac attgtttaat gcaacacgtt gacgtaaccc ccataacaac
      661 acactaaaca atactaacgc aattatagag cgataaagga gtgccacttc taagctgata
      721 ctttcccctt gtattttaac cgctataaaa ttaagacccc aaatcagtat acaaaaaata
      781 tacatcacag cgttcatcgt cccactccta tatttcttta atcaatttca agaggtaact
      841 tcgctttgat aatgttcaat ttctaacttc acttaacaat cccagtcaat tcatcaataa
      901 atgactgaaa agcatgttga gtgacattca atttaaccgc tacacccgaa tctgtacctg
      961 tatttgagca cagcatcccc gaatcatagt gcacgtaaag tatgatttcg tcgtcctcaa
     1021 gatgaatcac agacaaatag agacctggtt ctaaaaagga aatgtcagtc atacccgttt
     1081 ttaactcaaa ctgctgtagc tgctacatat cactctcaaa tagcgctaaa tctgtggaaa
     1141 cattttggtt ttcaaacgtg ctcgttactt tgtagttgaa aattttgtca cctttttcat
     1201 ctgttattgc atccaatcag aatcataaaa agttatgaca ccgtactgaa agatcgccat
     1261 ttcattatta tgacgttcgg tttcagtata ttgatgatgg gggaactttc cgcgtcttca
     1321 tacattgtga tacggttgaa agagatcttc aatcctatcc atcttgcata tttaaacatt
     1381 gatggcgtta aaatgttttc tatactgatg attgtaaaca cggtcattgt catttcttgt
     1441 acatatatca tttctaagtg gtccatgtcg tacaatcaaa aatatatttt gttacttggc
     1501 atggtcatgg acgtcgtcgg ttatgcgaat gtgacccatt cgaagcatca ccttcctgta
     1561 taccctaatt tattgaatca acagtttaaa gtatcacaac ctggcagcgt ttgggtggcg
     1621 gatatcacgt atgtatacac gaaagaagga tggctctatt tagcaactgt catggatttg
     1681 ttttcccgta gaatcattgg ctaggcgatg gcacctcgta tgactaaagc acttgtgata
     1741 tcagctttaa acaaagcgta tacaattcaa gaacctagag agggattaat ccaccactca
     1801 gaccgaggaa gtcaatatgc ctcaatagaa tatcaaaatt tactacgtga agaagggatt
     1861 cagagcagta tgagtcgtat agaaaactgt tacgacaagg catgtatagc atcttttcat
     1921 agtatcatca aaaaggaatt gatatatcat cagaactata aaatcaggaa tggagcgatg
     1981 tatagcattg tggcgtatct ccttactttt tacaattcta aaagcgtgca ttcaacgtta
     2041 aatgatatga gccccattga atttgagaag aaatacgcaa caaaatcacc tagcccaaca
     2101 tgtacttttt aattttcaaa agtacatgtt gggctaggcc agcaagcgaa gcgcggtaga
     2161 attctctctt ttctgtgtcc ggtttcttga catagatcca aattaaaacc tgccattttt
     2221 atggattgaa tactagttta ataaaatatg gtttatatta actacatcca attcatggcg
     2281 tattctctag attgcaagaa tctattctgt ccatctccaa gatgataacc gaatgtatca
     2341 atgtcttcct ctaactattc gaaaaccttt tctcatgatg aaactaaaat agatatagag
     2401 tactatgatt aagaccgtaa caacgaaata aacgacagct tgatgatggt tcaacacgac
     2461 gccgaaaaac aatagtgcaa tggggtatga tatgtctagc agtgtctgtt tgaatgtcat
     2521 cacataccct cgatactttt cctcaatagc ctcttgcaag tagttcgatg tcggtatgat
     2581 cgctaatggt tgcgataagc ccatcaagcc gttcaatatg aacaataaca gcatggcgac
     2641 cgctgtattc atttgaaaga ccaccatgac gcctaaaatc aacactgtga cacattgtaa
     2701 taacatggca cgttcataag tcgacttcaa attgtctttc tcagaattca tgcctagcca
     2761 tacagagaca gccaccattc caactgtaaa gccagcaaca acgacgccat attgcggtgc
     2821 agataactgc atgaattgta ctgctgcaat cggcatacca attgaaaaga cagcgaccaa
     2881 aaagtgcaag gctaccatga taatgaagaa atgtttcaac gctttttgct gttttaaata
     2941 acgataacct tctcgcaaac ttttcttcat ctgcttattt tcaaatttca cttctttatc
     3001 taatggcaag tttaagacaa agaggaccgc cagagcttct gtaataaggt tgagtaatgc
     3061 taaagtttcg atattaaaga aagcaatcat catgccccct atgattggag caaggaaatg
     3121 aatcgccgta ttagttgtta atgtcgataa tgtataccgt tcaacgtcac ctttaataat
     3181 atgattgacg ttggcatcga tgaacattcg gatagtggca tcggtcatat tgagcataat
     3241 gcctaaaatg atgatgtagt taaagaacat atcaaatacg atggtgaata caaacagaaa
     3301 aatcacattg agcaattgta tcattatgac catcatttta ttatgatagc gacccgcaaa
     3361 gagacctaac aatggttccg tcacaagtgt agaaatgaca atcgctgtta aataaagggt
     3421 aaaaagggct gtactgtccg tgtgttgtaa tatgtaaaat gcgcatgcaa aactaaagat
     3481 gcgcgaacct acagatgaga cgctattgaa taagagcaag ctcgcagttt taatactcat
     3541 ggtgtttctc tcctcgctaa aaccttatac tatttatccc acagccctcg aattttgtca
     3601 aaaatgtaaa agttaaaatt tgatttagta aaatttatta ttatattttt tatacgattg
     3661 gaaagtgaat gattttaagc gcatagtaaa aagccaacga aaatcctgat atgcgctgat
     3721 tttcattggc tttcatattc atttcaatat actgctggcc ttcacctagt ctaattcagg
     3781 aaggttcgct aataattgct ctctttgact ttcatattga ggtggcaaca taatcttttg
     3841 acctaattga tcttttggtt cgtcacgatc aaaacctgga ggaattgtcg caagttcaaa
     3901 aataatgtga ccacgttctt tagtgtaaat cgctttgaag tagttacgat ctttcacttc
     3961 tgtcacgtga taaccttgtg acattaaata tttttgccat gcaagatgtt gttcatcgtt
     4021 atctacagac catgcgatat ggtgaactgt accaacaccc caacgacctt ctggaagtgg
     4081 ctttttaggg ataatgatgt gatgcttcaa atctcctgct gtttcaaagt ggaagtggtc
     4141 tgcatcatgt tctagttctg ttaagcctaa atcatccaca agttctttta aagtttctac
     4201 aggacgtaat gataataata cagaaccgtg gaaacctaga attttgtttg tgtcactttc
     4261 ttcgtcgctt tcaactaatg cgagatccaa accatgaatg tcttcaaact cgattgttgg
     4321 acgacggaaa agttctgttt ctgtcgtttc aacattgtta tcgtttaaat gttgaaccca
     4381 gtagtctttg gagtttttag ggattctgaa tgcaatacgc cccacttgac cgctaccaac
     4441 tcgaccttta taagcattcg cccatgggaa aaatgtcata accgtacctg gatcaacatt
     4501 atcatttgca aaatacaaat ggtacgtacc cggatcgtca aagtttactg tttttttaac
     4561 taaacgtaag ttaagcactt tttcataaaa atctttgttt tcttttggat gtcctacaat
     4621 tgctgagatg tgatggatat gtttaatagg ttccatactc tctgcctcct tttatttttc
     4681 aaattgttca tcttgaatcg gtttgtaaaa ttgttccttg tcgccttgtc cgctgaaact
     4741 cttactataa aatggtggat tgtccgtatt cgatgcgtca ctcgttaaga tggcgcgatt
     4801 taaatgcatc acttcgccat tatgaaccag tgtaaaatct ccatacatga aaatttcacc
     4861 atcatcacca taagccactc ttgtttctgg gtgtgtttct tgttgatttg atggaagctc
     4921 gtatgttaat gcaccactcg gacatcgttc aaccactttg atgacgtctt ccacagccgc
     4981 attatctggt tgaacccaag gacgcttctc cacatcaaac acttccccta aaccacgtat
     5041 acattctgtt gcatgtacac atcgtttagg ttcgaaataa acattgatat tttcgcccgt
     5101 atattgcttt accatgttcc ccactccaat ctcaagactg tattcgtaag tttgaccatt
     5161 cacagattaa agactataat ttaatcatat cagtataaat attatactca taaaacaaca
     5221 aaagagtaaa gtaaacaacc ttttatagag gaggcttaac atggaaggac aaatcattcc
     5281 aggtgtagga acaaaataca gtttaacaac tgctaataat gatatcgttc atgtcatttt
     5341 acattacaat ggtaaacgag aaatttacat cactgatgaa gacgaagatg tactcgcgaa
     5401 cattggatta aatgaaactg aagcacgtga aatcgcatta aaattaatgg atgtcaatca
     5461 cgatacaatg gaaaagcaag ctttcgagcg cttttcatta ttacgtaaac aaatgcttgt
     5521 agattggatt aaagtaagtc aactttcacc attaaaaggc atcaatatcg aagaagctga
     5581 gcaccgcgtc ccaaacggag tcaacattgt agggattagt cgaggttctg acattattgc
     5641 taaaccagaa tcgaccgaat tgattcacga aggcgatatc ctccttgtta tcggatacaa
     5701 tgaagccgta tcagaatttg aagcagtttg ccgaccggaa ggatagccat aatgcattta
     5761 tttgacctgt ctgaactctt gctcagcgga ctgctcatct ttttgctgtt catcagtgct
     5821 ttccttgcca atcgcatctc tgcacccgac attatcatct ttttgctaat tgggattgta
     5881 cttgcttttt ttgtaagtca ttcagaaata ttagaatttg ctgctgaaac tggtatcgtt
     5941 ttgatgttct ttatgttagg gatggagttt cctatcaaac aactcaaaga tcttgcatta
     6001 aatatttata aagctggatt actagatctt ttactttcat ttggtgttac agtcatatta
     6061 gtgttaatca tgggacaacc tatcgaaatt gctttactct taggtggcgt agtctacgca
     6121 acaagttctt cgattaccgt caaactactc gaaaaaaaca atcgtatgac gaccaaagat
     6181 tccaacttta tactcggact actcgttttt gaggatatcg tttcgccttt acttgtaacg
     6241 attatcgcta gcttgtttat aggggaagcg ttatctgcca caagtttatc gtttgtattt
     6301 gtaaaaattg tcttattact tgttggtgca atattattag gacaagtcgt ctttaaaaaa
     6361 ctgggcgcct ttgttgaaaa atacgtgagc gaggacttct ttatcttatt tatggtgggc
     6421 ttaagtttaa cgtatgcagg gattgcaata cagcttggtc tctcggaagt atttggcgcc
     6481 tttttagcag gtattatggt agcagaaacg cgtaaaatta acctattgca acaaagtgtc
     6541 cgaaatttac gcgatctttt aatgcctatc ttctttatta attttggatt gtctattcaa
     6601 ctgacttcag gtatttcaat ggtcaatgta ttgcttgtac ttatcgtctg gtcagtcatt
     6661 tctaaaatca ttgtcggata cgtggggggt aagcaattcg gccttaacaa tgtgcctgcc
     6721 atgcgcgctg ggctttcttt cacacagcgc ggagagtttt caatgataat cgccggtttt
     6781 gcatctacac aaattaaaac attaagtggg gtgttcatcc ttatctctgc tattatcggt
     6841 gtcacactct tccaatttgc ccccaaaatt gcaaaacgtc tgtttaaaaa ggagaaaaaa
     6901 gcatctcttc caggtagtgt ataaatttgc catatgcttt aaaagtttga ttgcctgaca
     6961 tgaaatattt taatcaaatt gccctcattg atcacagttc aagttttcat ggttgccatt
     7021 atggactgag aatcaatgag ggcaattttg tgctcaaaag ggttctaaaa aattattttt
     7081 atagactcaa tccccttctt attgcattaa gtttccatag tcttattacc actgatcata
     7141 ctaggagtac actctgccct agctttttaa tcatcacggg cacgcatgct ttcatcccct
     7201 ttctttcatt aaaacttcac gcggactttt ctttcatctt ccctacatct cacctcaaaa
     7261 tgtaatcgtt ttcaaatttg aattgacagg agcagaactg gattataaac tatttgtaaa
     7321 cgattacaaa atttaatctt cacagggggt atagctatgc ctgagttaaa aatgtcacat
     7381 gtcaaaaagg tttacgataa caacaacgca gtcgtgaaag atttcaatct agatatttcc
     7441 gataaggagt tcatcgtctt tgttggacca tctggttgtg gtaaatcaac aacattacgt
     7501 atgattgcag ggcttgagtc cattacaggg ggagattttt acattgatgg gcaacgtatg
     7561 aatgatgtcg aacctaaaaa ccgtgacatt gcgatggtgt ttcaaaacta tgcactttat
     7621 ccgcacatga cggtttatga aaatatggca ttcgggctca aactgcgtaa attcgacaaa
     7681 gctgaaatcg acaaacgtgt caaagaagcc gcagagattt tagggcttac tgattatttg
     7741 aaccgtaaac cgaaagcact ttctggcggg caacgtcaac gtgtcgcatt aggtcgtgcg
     7801 attgtgcgtg atgccaaagt gtttttaatg gacgagccgt tatcgaatct agatgccaaa
     7861 ttacgtgttc aaatgcgcac agaaatttta aaactacatc atcgtctgaa cacaacaacg
     7921 atttatgtca cacatgatca gactgaagct ttaacaatgg ccacacgtat cgtcgtatta
     7981 aaagatggcc acattatgca aatcggtacg ccgcgtgaaa tttatgatac acctgacaat
     8041 atttttgtcg cacaatttat cggctcacct gccatgaaca tgattgatgt gacagtcact
     8101 gctcaaggca ttcaaatcgg tacaaaatta ttcaaattag cacacaaaaa attcgaaaag
     8161 ttaaaagaaa aaggctttga aaaccaaact gtcacattag ggatccgtcc tgaagacatt
     8221 catgaagaac ctatttttat tcaggcgtca ccagaaacag ctttcgaatc taaagtcatt
     8281 gtctcagaat tgttaggctc tgaaattatg gtgcacacac aatttgaaca acatgaaatc
     8341 gtcgcgaaac tcgacgcacg aacaaaagtg tcagcaggcg aaacactcac actcgctttt
     8401 gatatgaaca aatgtcactt ctttaatcca gctactggaa atcgcatcgt ataagggggg
     8461 gttcgcatga acaagatgtt aaaagcagca ctcttactca tcaccgtgct tgtcgtctta
     8521 acggcttgtg gtcctaaccg ttcgcaaaaa gacatagaat ccgcattaaa tcgtgataat
     8581 aggaaagaaa aaccggaaca actcacaatg tgggtcgatg gtgatgcaca aatggccttt
     8641 tacaaaaaaa tcactgtggc ctatacgaaa aagacaggca tttcagttcg tctcgttaat
     8701 gtcgcgcaaa atgaccagtt agaaaattta tccttagatg cgccagctgg taaaggacct
     8761 gacctctttt tcctcgcgca tgacaataca gggagtgcct atttacaagg gctcgctgcc
     8821 gaactggact ttacagatga acaattgaaa ggctttaata aacaagcttt acgtgcactc
     8881 aattatgata ataagcaact cgctttaccg tctatcgttg agtcaacagc gttactctat
     8941 aacaaaaagt atgtcaaaac ggcgcctaag acgattcaag aagtcgaagc gaatgcagac
     9001 cgtattaata agcctgctga ccatcaatat ggctttttat ttgatggtcg tgatccgtat
     9061 tttaactatc catttatgtt taacagcaat aattacgtat ttaagaaaca tggcgaccag
     9121 tatgatgttc accaaactgg cattaatgat ccacaagtca ttaaaaatgg taaacgacta
     9181 caaaaatggt acgagaaagg ctacttaccg aaagcagcga atcataacat tatgatcggt
     9241 ttatttaaag atggacaagt cggtcagttc gtgacaggac catggaatct gacagaattt
     9301 caacaaacac taggtgacga cctcggtgta acaacgttgc cttctgataa tgggatgaag
     9361 atgagacctt atctcggcgt acgtggttgg tatttatctg aatatagtca gtctaaatat
     9421 tgggcgaaag atttgatgtt gtacttaaca agtcgagata cacttcaaaa atatacagat
     9481 gaacgcaatg aaattacagg gcgtctcgat gtcaaatcgt caaatccaaa cttaaaagct
     9541 tttgaagaac aggcgaaaaa tgctgaaccg atgccaaaca ttcctgaaat gagacaagtg
     9601 tggacgccaa tggcaaatgc aagtacgttc atttcagaag gtcaagatcc aaaacaagca
     9661 ttagaagatg cgaatcgaga cattcaacaa aacatcaaaa ttttgcaacc gaacgataac
     9721 gaatagaaag gagttcccct atgaatcaac gaaatgctaa attagcggca atgctatcca
     9781 tcattccagg cctcggacaa tgctataatc gtcaatttgt caaagggatc tgttgcacca
     9841 tctttttcat cagctttatt tctgtgttct atcagttttt taacattggc ttttggggac
     9901 tcttcacact cggaactgtt cctaaattag atgattcacg tgtgttatta gcacaaggga
     9961 ttatttccgt attactgatt gcatttgcac tcacacttta cattgtgaat atcatcgacg
    10021 cgtatcgtac agctgaacgc tttaatcgtg gtgaagaaat taaagatccg aaagcacgtc
    10081 gtatcgcagc gtgggacaaa acatttccat atttattaat ttcacccggg atgtttttac
    10141 tcgtatttat cgttgtcttc ccattattat tcatgggtgc ggtcgcattt acaaactata
    10201 acttatacaa tgcaccccca cgtcatacat tagaatgggt cggttttgac aactttaaaa
    10261 ctttattcac tatcgacatt tggcgtcata cattttttag cgtcatcact tggacgattg
    10321 tatggaccct cgtcgcaacg acattacaaa ttgcattagg actgttttta gccattattg
    10381 tgaaccaccc actcgtgaag ttcaaacgct tcattcgtac agtattaatt ttaccgtggg
    10441 ctgttccggc attcgtcaca atcttaatct tcgcagcatt atttaacgat gaatttgggg
    10501 cgattaacaa tactatttta caaccattat taggtgtcgc acccgcttgg ttgaatgatc
    10561 cgttttggtc aaaagtcgca ttgattgcta ttcaaacatg gctcggcttc ccatttgttt
    10621 tcgccctgtt cacaggtgta ttacaaagta tttcgccaga ctggtatgaa gccgcagaca
    10681 tcgatggggc gtccagttgg caaaagttcc gtcacattac gttaccgcac gtcttatttg
    10741 cgacagcgcc attactcatt atgcaatatg ccggaaactt taataacttc aacttaattt
    10801 acctctttaa cgaaggggga ccgcctgtac caggacaaaa tgcagggagt acagatatcc
    10861 taatttcttg ggtttacagt ttaacattcg aattcaacaa ctttaatatg ggtgccgttg
    10921 tatcactcat tatcggcttt atcgtcgcga ttatcgcatt tttacaattc agacgtacaa
    10981 gcacattcaa agacgaggga gggatttaat atgaaccaaa agaaaaaagt ttggaaagca
    11041 atcggtatct atggctttat cgcgttcatg tttgtcgtca ttttataccc attgctttgg
    11101 acattcggca tctcgctcaa tcctggcaca acgctttatg gcgctaagat gattccagac
    11161 aatgcgacct ttgccaatta catctattta ctgacagatg aaaatagcca atatttaaca
    11221 tggtataaaa acactttact cgtcgcatcg gcaaatgcat tatttagcgt gatttttgtc
    11281 acactgacat cttatgcatt ttctagatac cgctttgtag gacgaaaata cggcttaatc
    11341 acgtttctca tcttacaaat gttccctgta ctcatggcaa tggtggcgat ttatatcttg
    11401 ctcaatacta tcggtctact cgattcttta ctcggcttaa cattggtgta tatcggtggt
    11461 tcaatcccga tgaacgcctt cctagttaaa ggttatttcg acacgatacc gaaagaactt
    11521 gatgaatcgg ctaaaattga cggtgcgagt catatgcgta ttttcttcca aattatgtta
    11581 ccccttgcaa aaccaatttt agcagtcgtt gccttattta atttcatggg gcctttcatg
    11641 gacttcatct tgccgaagat cctcttacgt agccctgaaa aatatacatt ggcggtcgga
    11701 ttgtttaact ttattaatca ccagtatgcc aataatttca cagtctttgc agctggagcc
    11761 attatgattg ccttacctat ctcaatcgtg ttcctattct tacaaaagta tttagtttcc
    11821 ggtttaacgg ctggggcaac aaaaggctaa acgtttacaa aaaacaagca gagcacgcat
    11881 actctgcttg ttttttcgtg attaaaggcc ttttaccatt gaagcctccc tttctgactt
    11941 aatctcatcg gctaatcctt gtaattttgg gaaatacgta ttagcaaaac caataatcag
    12001 tttatttttc acaaaaagac tcatttctct atcttcagga atcgtgtaat ctatcaaatc
    12061 taaaatctct tgatgcttga tatgctctga acctacttta tccacatact tcaatagtgc
    12121 taaaaagagt tgctcgaaag tttcatgttc aaaatcaaaa tcgagtaaca ataggcttac
    12181 agaaatcgtc tctaactgtt tatctccaag tcgatctgct atttatctga tggcttggta
    12241 taattatcta gagctttctt tatcttttaa catcattttc acctcattaa atttacgacg
    12301 acatatagaa aattcatcat atacatttaa cactcatcga tcttatttaa acttgctcaa
    12361 cgaaagtgta taaaaaggcc aggaatttca cttcccggcc tcaatcacat tgttatgtta
    12421 aagttcaatg acacatgctt cataagggcg cattgcgtta aagtccactg caccttcatg
    12481 attatggagt aacacttctc cttcatttaa cttcaaatct gtattcaaac ttgcaacttc
    12541 ttccgataaa ttgccaatga ttactacagt gcgaccatcc aaactgcgtg tataagcaaa
    12601 caactgtcca ttatcggcat cgaccaaatc aaattgccca tacgtataaa tgtcatctga
    12661 tttcttcaac cgaatgagct ctttataaaa gtttaaaatc gacttcggat cctgttcttg
    12721 ttgtgccacg ttaatatcca catagttcgg atttactgga aaccatggtg tcccagtcgt
    12781 aaatcctgca tgttcattcg catcccattg catcggtgtt cttgagttat cacgactgtc
    12841 cattctcaat ttctcaagta atgaatcaac atcgccaccc gcttcttgca caatacgata
    12901 ttcattttta acggacacat catcaaattg ttcaatatca gtaaacggat agttcgtcat
    12961 tccaatttct tggccttgat aaataaacgg cgtgccttgt tgtaaaaagt aaacgagcgc
    13021 atgactggtc gcggaagcat accaatattg ttggtcatct ccccatgtcg acacacggcg
    13081 cggttggtcg tgattttcaa taaacaatgc attccaccca atattttcta actgcttttg
    13141 ccagcgattc agcacgtgct tgtatgcttt aatatctaga cgtgatgcta cattatccca
    13201 taacccgaga tgttcaaatt ggaaaatcat gttaaaaaca cctttgtcac taccgaccca
    13261 gttttcagca tcatccgggt ttacaccgtt tgcttcaccg actgtcataa tgtcatagta
    13321 cgacagggat ttggccttca tttcacgtaa ccacgttaaa atacctggtt gattcatcgc
    13381 cacgtcaaac gcaggggcat actgttgacc ttcttgtaca ggaaggttgc ctgcttcaaa
    13441 tgatttctta atatgcgtaa tggcgtcgac acgaaaacca tcaatccctt tatcaaacca
    13501 ccaattcatc atgttaaaca cttcatcgcg aactgctgga ttttcccagt tcaaatccgg
    13561 ttgcttctca ctaaataaat ggaaatagta ttgattcgtt gtttcgtcat atttccaagt
    13621 cgagccgtta aaaatgcttt cccagttatt cggttcagac ccatccgttg cgggatctcg
    13681 ccaaatgtac caatcacgtt ttgggttgtg gcaactttgc ttagactcga taaaccatgg
    13741 atgctcatca gacgtatgat tgactacaag atctaaaatc aatctcatcc cacgtgcatg
    13801 cactttttca agcaattcat caaaatctgc catcgtcccg tatgtttcac taatcgcttg
    13861 ataatcacta atatcataac cattatctgc attcggtgat ggaaacatcg gacttaacca
    13921 aatgacatca ataccgagtt cctgtaaata atctaacttt tcaatgaggc ctcttaagtc
    13981 acctattcca tccccattcg aatcattaaa actgcgggga tatacttggt atgccaccgc
    14041 ttccttccac cattgtctgg ctattgtatc gctcattttg agacctcctt cacttcccat
    14101 gctgttatgc ttaagcccac cacatatcgg gcgcttgatc gtagatatta actgatttta
    14161 aattttctac agctttatga aacccttctt ctactgacat aatcggatcc tcatgttcga
    14221 tactgagcac ataatcgtag ccatgaattc ttaattggct aatcatttcg ccccattcgt
    14281 aaggactatg accatagccg actgtacgga atgtccaagc acgtgtcgca acttgttgat
    14341 acggttgcat atctgttaaa ccgtacatat tcacgttgtc ttgattaatg tacgtatctt
    14401 tcgcatgaaa atgatgaatc gcattcgctt ggcctaaaat gcggatcgct gcgataggat
    14461 caatgccttg ccaccataaa tgactcgggt ctaagtttgc gccgatatat tcatttgtgg
    14521 cttctcgtag cctcaacagt gtatatggtg tatgtacgag aaaaccggca tgcagttcta
    14581 ttgcaatttt gacatcgtgt gatttcgcaa atactgctaa atcttgccaa tatggaatga
    14641 gcttttgatt ccattgataa tcataaattt cagaataagc tgttggccaa ggggttaccg
    14701 gccagttcgg atattttgca ctgtcatcag aacctgcaat acctgagaaa gtattcacga
    14761 cagggacacc gagtaacgcc gctaattgaa tcgttttgcg caacgtttca tcggcttctt
    14821 ttgcttctgc ttcatccgga gcaatagggt tgttatggca actgaaagca ctaacctcta
    14881 gcccacgttg atgaatttta tccataaaga tttgtcgctc attttcgtct gctagcagtg
    14941 catcaaggtc acaaaattta tttcctggat tgccccctgt accgacttca atcatatcga
    15001 ggcctgctgc agcaacatca tctaacatct gttcaaaatc acgatcataa aataatactg
    15061 aaaatacacc taacttcata tggaacacac cttcctatcc ttgtattgtg atactttgtc
    15121 gttctctatc actttgataa atcgcatcaa tcaattgtgt cacacgtctt gcctcttcag
    15181 gtttgactaa tggttctacc tccccaaagc aactgcgaat aaaatgatcc atctgacggg
    15241 atgcggcaac accttcattt aagctgacat cttgttccaa aatatgataa ccgtctgatt
    15301 gtggtgcata catttcaaat gggaataatt gtaagccacc cgcatcacct gaaatgctca
    15361 cgtctaactt gtcgtgatga atattcgctg cccaagaaca ttcaaattgc atactcgcac
    15421 cgttttcaaa tgttacataa ctggtcgcat ggtcttccac atcaaaagtc ttgtaatcaa
    15481 atgtccccca ctcattcaat tgctgcggct gacgacttaa agcattgtat gtacggccta
    15541 aaatttctgt cggttgcgca tcttctaaca gccacaatac gaggtcgagc acatgacaac
    15601 catagtcgat taaacaaccg ccaccttgca atgctttatt cgtaaacacg ccccatccag
    15661 gcacttttcg acgacgtaac gcttgcacac gggagactac cggcacaccg accgcaccct
    15721 gcgcgacggc ttgttttgct gcttgtgcca catccgtaaa acggtaatga tatgcaatcg
    15781 ttaatatacg cgcattgcgt tgtgcagctg ccatcatcgc atcacattct gcagtcgtca
    15841 tcgccattgg tttttcacat agcacatgta cacctgcatc gagcgcagca atcgtcaaat
    15901 ctgcatgaaa cttgttcgat gtacaaatga tcactgcttc tacttgtgct aacaatgctt
    15961 ctaaagtcgg cgcaacgtac gcaatctcaa attgtgtcgc aacttctcgt gcgagtgctt
    16021 cattcacgtc atatacacct ataagttctg cacgttcatg ttgctgaatg agtggaatat
    16081 ggcgatctct agcaatgccg ccagttccta ttacacctat ttttaatggt ttcatcgtga
    16141 tgtctccttc gttgtcttaa tcaaaataaa cggcttttcc agtacgggcc gactcataaa
    16201 tcgcttctaa tatttgtgta acgacaagcg cttcttcagg ttttacacga ggcggtatat
    16261 cgtttcgaac acagtctatc catgcctttg cttcttccaa cgcttcatcc actgtctcgc
    16321 cttcataaaa atcgacacct ttattgtcca gttcgatgtg tttcgtatac aatgtaccca
    16381 actcttcgcc gtgaatacgt aagccatctt tcatatccgc gccgcccttt gttcctgata
    16441 acgaacattt cgcttcatct acgtctaaag agttaagtgc ccacgcggac tctaaaataa
    16501 ttgtggcacc atttttcatt ttaataaatc cgaatgctga atcttctaca gtaaagtctt
    16561 tcggattcca cggtccccaa gcattggcgg cattttcttg ctgactcaat tgatggaatg
    16621 tagaccccat gacagcagcc ggttcataat tgttcatcat ccaaagtgtg agatctaacg
    16681 catgtgtccc aatgtcaatt aacgggcctc caccttgtgc ttcttcatct aaaaagacgc
    16741 cccagttcgg cacggcacga cgtcgaatgg catgcgcttt accaaaataa atatctccta
    16801 aatccccacg cgcagttact tgatgcaaaa attgactgtc aacacgaaat cgattttggt
    16861 aaccaatcgt cagtttttta cctgtccgtt ttgccgcatc taacatttgt tgcgcctcga
    16921 cagtggtttt ggccattggt ttttcacaca tgacatgctt atttgcttca agtgcatgaa
    16981 ccgtcatgtc acaatgaaga tagttcggtg tacaaatatg tacgacatca atcgtttgat
    17041 cttttaataa ttcttgataa tcttgataca cttttgcatt aaccgttccg aacgttgtgg
    17101 ctgctatctt tgctttttcg atgtcaatat cacaaaatgc cactatttct acgtcatcga
    17161 tttgtgctaa actcggtaaa tgtttaccat tcgcgatgcc cccacaacca atgatgccta
    17221 ctttaatccc catacaacac actccaatct ttgatgatat ttccgtctct ttcagttcga
    17281 tcgtgtttct atattttgta atcgattaca ttttaaaata taacaaaaat gcatcctatt
    17341 gtaaacggat tcacacagga tgcatcaact tattttacta tcatcaacgc gcattaatca
    17401 gatacatttg aactgtttta agtcgattga cgtattaaca actcaccttc cagtaaagta
    17461 tcgcgttctt ccaaatcttc accttttaat agcactaaca atttttccat cgcacgtatc
    17521 ccaatttcag ttgcaggttg cgcgtaagtc gtcaaacctg ggtcgacaat ttctgacaaa
    17581 ataatattat caaatcctac gatcgccata tcttcaggga cgcgtttccc atgctttttc
    17641 aactctttca taatgccaat cgccatttca tcattggcga caaataatgc agtcggcatt
    17701 tcagcttgtt caagtaattg cttgccaatg cgataacccg actctaaaga aaagtcccct
    17761 tctatcaccc aatcatcacg taccgttaaa ccatggctgt ccattgcttc acgaaagcct
    17821 tgcaagcggt actgacctaa aataccatcc aatgggcctg taatatgtcc cactttcgta
    17881 tgtccagctt ctattaaatg gcgtgtcatc aatgcagatg cttcaatatg attaattgaa
    17941 acagaaggca cattaatttc tttaatttgt tcacaagcga gcacaagggg gtattgcgca
    18001 ctgacttttt ctaaattttc aagatcaaga taggacgtga gcacgatcat gccatcgact
    18061 ttcttttcat acaaataaga aaaatatgta tcaccttgtt gattttgcgt atctccgaga
    18121 atcacttcat agccgtgttc tcgtgcaata ttttcaatgt ttctgagtat cgctgagaaa
    18181 aatgaattgg taatatccgg tacaacgaca agaatcgtca tcgtctccat tttacgcagt
    18241 tgtctcccga tattattcgg atggtagcca agtgctttgg cggcttctaa cacgcgttgt
    18301 tgatttttcg gcttgacctt ccccgtatta ctgagcaccc gtgaaaccgt tgctgtcgat
    18361 acatttgcta actttgcgac atcctttaca cttaccatag tccttcccct tttatgtctt
    18421 cgtaataaat taaatataac acaaaaaata caccatcgct tgtttcttct aatccctgta
    18481 taactattat cccattttaa aaatatgcga tgacttaaac ccttctcaca ctttaactgg
    18541 tattccctca tctaatactt catcattttt actatttgta aatactaaaa taacgcacaa
    18601 tatatgacat tgcgcattat aaaatgcttt gaaaatgtct gactatttta gtatatttaa
    18661 tactatatga aacaaaataa agaaagtagg gttgacatgt actttacgca attgagtgtt
    18721 gatgattttg atgcctttgt aacaaaccat ttttcacatt atacgcaaga cgcaggtcac
    18781 taccattata gaaataaata taaaaatgat gtccatttag tcggcgttaa aaacgaccaa
    18841 gatgaagtga ttgcggcttg tttattaacc gaagcacgtg cacttaaatt ttttaaatat
    18901 ttttatacac accgtggtcc agtgttagat tacaacaatc tcgaactcgt ccaattcttt
    18961 tttgaacacc tcacacaata cttaaaaaaa cagcgttgcc tgtatgtgtt aatcgatcct
    19021 tatgtgcaca accacattcg tgacgcaaaa gggaatatta cgcaacactt cgagcatgct
    19081 caacttttca aaacattaga tcgtcttggc tacaaacatc aaggttttcc aataggatac
    19141 tcgagtcaca gtcaaatacg ttggctttct gtacttgacc taaaagataa atccgaacag
    19201 caacttttag aagaaatgga ttaccaaaca cgacgtaaca ttaaaaagac atatgaaatg
    19261 gatgtccaag tcaaaacttt acctatcgaa gaaacagagc gcttttttaa actttttcaa
    19321 atggccgaag aaaaacatgg ctttactttt agagacttgc cttattttga agaaatgcag
    19381 aaaatgtatg cgaaaaatag tatgatcaag ttggcgttta ttgatttaga tggccttttg
    19441 aagaagcaaa ctgagaaatt agacacatta aaagcaacaa ttgcagaaac tcaagcggcg
    19501 ttagaaagtc atcctaactc taagaaaaac aaaactaaat taaaacaaac tgaacaacaa
    19561 ctacaagcac aagaacgcaa aattgaaaaa acgcgtcaat taatcgttga agatggcgaa
    19621 atattagatt tagctgcggc gatttatatt tacaaccgtc atgaagtgta ctatttatcg
    19681 agtggatcga atcctaagta caatgcgtat atgggcgcct atcgattaca atgggacatg
    19741 attcagttcg ccaaacaaca aggcattgac cgttataatt tttacggtat tacaggtgat
    19801 tttacgaagc atgcagaaga ttacggtgta caacgtttta aagaaggttt cggggcacat
    19861 gtagaggaat atgtcggtga ttttgttaaa ccaatcatgc cgatgatgta tcgatgtgct
    19921 cgattactga agcgctaaca ccacattcat acacgttatt aacgagaagt attaaaccac
    19981 ctcactcctg gataaccgtg ctaggtggtt tattttgtgt atatgaaagt cgcttaaaaa
    20041 attcagttac ccttttccac atcatgtcaa gccttagtac atgaatttgg accccactta
    20101 aattaaggcc tgtgtaggct tatgtgtacc tgtcatctca ctaccgaact cgcctatcct
    20161 gattgaacta tctatgtgat gagcttttgt tactcactta ctaacattag gctgatttca
    20221 tgacataaat tcatatctat caaaatcatt aaactacttt tatcttttta aatatcctac
    20281 aaattgagaa acacttagtt ttgctggaat actcactagc atgtgtatat gatttttaca
    20341 tgcttcgcct tctattatct ctacgccttt tctttcacat cgccgtctca catattgctc
    20401 attattcaat cacttctagt ttcaataata gatacatgac aattaaatca agcaccgtca
    20461 aacctatgta aagtaacaac atggttgaaa tacgtacggg taaaataatg acaatgataa
    20521 agtaaaccag acttaaaact agaaaagatc ttcctgttaa tatattggta cgtgccttgt
    20581 ctggaaaaaa gaaaataata ggttgatgac gattaaaaat aataaaccaa aaacccgtta
    20641 ataaaatcaa aatcgtaaaa ctaataccta caacataact catttcatac actccaatcc
    20701 ctctttttct ctatttggcg gatgaaataa tctctatcaa aactattata aataaaataa
    20761 atgtaataag taaactatat ttcataaaac tactaactta tatattatca tttaaaaggt
    20821 caaagtgata taagtgaatt aaaaaagacc tgccctcgta tttacaagga caagccttca
    20881 ttgattaatc tttctttggt ttgcgacgtc tgccgaataa aagtaagcta cccatgaacg
    20941 caataaatcc acctaataaa acacctgatt gttcgttgtt ttcacccgtt tctggtagtt
    21001 gtttaactgt tgctcgcgct gaaattgatg ggagtcgagt tgtttcaaca tgtggtctag
    21061 ccacgatatc cgtcgcttct tgctcaccct ttaccacacc tgtcattatt gtagacacat
    21121 gtgcaactgt tgggattgtc acctcttcat catgcactga ttggttctct tttgttgttt
    21181 gtacacttgt ttgatgacca tgagatgccg cagttacgct tgataaatca tctgtagttg
    21241 tcacattatc cgcacccact gttgaatcga ctttaccctc tgataattga tcgtcatctt
    21301 tcacagtaac tttaggttgt tcaccacctg ctggatagtt atgatttttc ttagtatctg
    21361 tcatatcagt gcctgttacc gatataccat gtattttcgt cacagcttta ctggcttttt
    21421 gattatctcg ttgttgattg gtaaatactg ggacagtgat atgatcctga gtaccatccg
    21481 gatacgtcac tgtgactgga atatccactt taccttctac tgtgccatcc ggtaattgac
    21541 tttcatcatc cgctgttgcg attggttgtt cgccacctgc tggatatgtt ggtatttgga
    21601 ttgactttgt cacatcgttt gcagttgtag gatcaccata atctttagtt actcctaatg
    21661 tgattggatc gtatttttca ttttctgctt gcttacctgt aaaaaccgga actgtcatga
    21721 gatcttttgt gccatccgga tacgtcactg tgactggaac attgatttga ccttcttttt
    21781 gaccatttgg caatagtcta ggatcattta ccgttacaat aggttgcacg ccatctactg
    21841 gaaaatatgg aattcgaact atatctatca cttcatcctc tgtcgtaggg ataccgtact
    21901 ttttcgtgat tccgttagtt gttggctcat atttttcatt atctggttgt ttttccgtta
    21961 cgactggaac tttgatatga tcctttgttc cgtctgggta tgtcactgtt acatctatat
    22021 ccttgtgacc ttctgttgtt ccatctggta attgtgtttc atcatccact gttactgtcg
    22081 gttgttgccc ttccaatgga tagttcggta cttgaattga atctgttaca tcagttggca
    22141 ttactgggat tccaaatggt ttcgataccc cagttgttat taggttatat ttgtctttat
    22201 ccagatgctt gtttgtccaa actggaactg aaatgtgatc tgtagaacca tctggatacg
    22261 ttactgtcac atcaacgtct actttacctg gcgtttgccc atccggtaaa gtatttggaa
    22321 ccgtcactgt tacttttggt tgtgttaagt ctgttggata tttcggtatc tccactaatt
    22381 ttataacgtc ttcctctgtt gttggagtac caaacggttt caagatacct gttgcgaccg
    22441 gatcatattt atcactatct aattgttgtt ccgttacgac tggaactttg atatgatccc
    22501 ttgttccgtc tgggtatgtc actgttacat ctatatcctt gtgaccttct gttgttccat
    22561 ctggtaattg actttcatca tccactgtta ctgtcggttg ttgcccttcc aatggatagt
    22621 tcggtacttg aattgaatct gttacatcag ttggcattac tgggtttcca aatggtttcg
    22681 atactccagt tgttattggc tcatattgcg atgccattgg ttgtttttct tcaacggtca
    22741 caggtgcaaa gattgtgttt ttagaaccat ctggatatgt cacaatcact ggaatatcat
    22801 actcaccctc tgctactttt tctccaggtt ttactgtaat cgagccatca ccattcacta
    22861 aagcccaagt tggtacgtga tgaccttttt caaaagttgt gccatctagt aaaggtttgc
    22921 catccatatt cttaggtgct ggaatcgtta ctctttgacc tgattctact gttgtcgatg
    22981 ggtatatcgg atgatatgtc gccgcttctt cattgacatg tacaataaga gagtccgaag
    23041 ctacgatatg attacctacc acgagttgta cagtatacac ttcgcctgat tttgcgctag
    23101 acggtattac aaattccgct atatgttcag cctcttcttc cgtaaaaaca ggaccactat
    23161 cctcaacaat actgcccgat gaatctttcc attgtacacg tgtaagtaat gaagttttag
    23221 gcatacctat gatatcaata gttgctgttt gcccacgatg cgcagggtta gaggttgcat
    23281 caaattcttt tatttcgatt tgagattgtg gtgcttcaat aaccgcaaaa ttaacattga
    23341 cccatgcacg tcgaatgggt ctataatagg gagctgtttg cggtgtaacg gtcaaattat
    23401 aattcggttt ccggaactct ggtgaagtaa aacttgaata agtttttaca atttcaccat
    23461 caaaatccaa tacgtaaccg taaagatggt ctttgttgaa tgtgccttta gggaaacgca
    23521 atgtatatct cccccactca ttcgttatcc cttctacagt tgctgcgata tattctggat
    23581 gttttattaa taattgacgt gctgcttctg ctcgatcttt cttcggcaag cgattgactt
    23641 gcgcatcgta ggctttagca ccttgatctg ttaatgatga catgaccact ttgtatccag
    23701 aggcaacgac atctttcgca ttgtggtttg gacctgtcgc tgagttcaca taatctccag
    23761 cacctgtttc tatccaaact ttgccgctca caaagttatt ttcaattatc gtgacggctg
    23821 gatttgctgc agcacctttt gtatctttca cgtaatgttt tgatattaaa tattgttctg
    23881 aaggtatcgt tgtcataaag atacctgtac gttgcatatt tgtaccaatt aatggaaatt
    23941 ggcccatatt gttgtatgtc acagaatcca cgtacgttcc gggaacatat cctcctgcaa
    24001 cacgtaacat tgtagcgata ttaccgtctt tagttctaaa atcattgatc catattttat
    24061 aatattgacc ctttactgct ctatatacgt ggtgttttcc tttagcatct atccaacctg
    24121 tgcgtaaatc gaaagcataa gcacctggac ccacttgatt accatccgca gcgcttaatc
    24181 tacttgtcgt ttttgctgta taaattggcg aagtggcacc atcttgatct atccaccgca
    24241 aataaacttt agtgccctct ggaacaggtg ttaaaccatt agctattgtc gttggtgttc
    24301 cgtggtctaa catccatgca cgtccagata acgtatgtgc tttattggtc acatcattta
    24361 cagatttgat atagccattt tgaattgcat cagcaagtat ctctacttga ttctctggaa
    24421 caacatcact cggccatgct tttgttttag aagcagtctc tttgtcaaat tgatttcttg
    24481 ttgtcacgta catactttcg aaagttgatt tttttaatag attgtctaat ccttctgcca
    24541 gtttgggtgc ttccattgtt ggtggttgtg ccctgttcgt ttgcgattga tttgttagat
    24601 tttctaaaga tggatattct tgtttctgtg taggcatatc tgttgtagac gttgctgttg
    24661 tataggtttc acttgttaaa tatgctgttg tttttgcatt acgcgctgat atttcattgt
    24721 ttgcttcggg gtcagtatta tttttcggag tgacattgtt actttcgtca gtcgtttgtg
    24781 catcattcga ttgttctttc ataggggctt cggttgaatt ttctgtgtca ttaataggtg
    24841 ttgctgttgg ttgtactgca ttattttgtt ctacagtttg tggtgatgtt attgatggtc
    24901 catttccagt tgcgacttta tctctcattt cttcaactga tgaaagattt ttttctgtgg
    24961 gcgtcacttg tgctaccttt tcgttcgtct ctgttaaagc gccaaaaata gcggaagcat
    25021 caaagaggtt ttgctttgct tcagatgttt gatcttgttc tgcagcagat gcatcactcg
    25081 tatggacacc tagcaagaaa gctgctccta caagcactga cacagtacca gctgaaaagt
    25141 ggcgaatagc ataccgattc tgacgttttg ataaaaaatt aaaatgttta gttcttgatt
    25201 tattcatgaa attatcaact cctcattatc aatcttaagt atttaaaaag cttttattac
    25261 aactccggtc attctatcac cgaaattaat aatgtcataa atatttgaaa aatctttaca
    25321 tgcgc
//
LOCUS       DANHPA010000027        24874 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.027, whole genome shotgun sequence.
ACCESSION   DANHPA010000027 DANHPA010000000
VERSION     DANHPA010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 24874)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24874)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24874
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.027"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            19..333
                     /gene="spoVG"
                     /locus_tag="PTC28_000889"
     CDS             19..333
                     /gene="spoVG"
                     /locus_tag="PTC28_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation regulator SpoVG"
                     /protein_id="HDK5716198.1"
                     /translation="MKVTDVRLRKIQTDGRMKALVSITLDESFVIHDLRVIEGNSGLF
                     VAMPSKRTPDGEFRDIAHPINSEMRQEIQDAVMKVYDETDEVLPAQKPTSDASEDKEE
                     VE"
     gene            615..1979
                     /gene="glmU"
                     /locus_tag="PTC28_000890"
     CDS             615..1979
                     /gene="glmU"
                     /locus_tag="PTC28_000890"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HDK5716199.1"
                     /translation="MQKHAIVLAAGKGTRMKSKQAKVLHQVAGKPMIGHVIDQVRASG
                     VDQVVTIVGHGAESVKEKLGDTSLYSFQQEQLGTAHAVKTAAEHLSAKEGITLVVCGD
                     TPLITSATLSRLVAHHEQEGAQATVLSATASQPFGYGRIVRDVQGQLMEIVEEKDAND
                     SQKAITEISSGIFAFDNQTLFEMLERVDNNNAQGEYYLPQVLTLILQNKGKVAVYHTD
                     DFEEIMGVNDRVALSRAEKAFRQRINTYHMQNGVTLIDPDSTYIGAEVEIGADTIIEQ
                     GVQLSGHTVVGEGVTVGQYSQVHNSHIYDAVTIKHSVITDAVVGAKSTVGPFAQLRPG
                     ADLGKETKVGNFVEIKKARLDDEAKVSHLSYIGDAEIGARTNVGCGSITVNYDGVNKL
                     KTIVGKDAFIGCNTNLIAPVTVGDGSLIAAGSTITDDIPENSLALARSKQVTKPGYMT
                     QKEQ"
     gene            2055..3020
                     /locus_tag="PTC28_000891"
     CDS             2055..3020
                     /locus_tag="PTC28_000891"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016426512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HDK5716200.1"
                     /translation="MLNTEYKNSSLKIFSLKGNEPLAQEVADHVGVELGKCTVKRFSD
                     GEIQINIEESIRGCDVFIIQPTSNPVNVHLMELLIMIDACKRASAANITIVVPYYGYA
                     RQDRKARSREPITAKLVADLFETAGADRMIALDLHAPQIQGFFDIPIDHLMGVPILAD
                     YFLKNKEIDPEKSVVVSPDHGGVTRARKLADILKTPIAIIDKRRPKPNVAEVMNIVGE
                     IEGRTAIIIDDIIDTAGTITLAAQALKDKGATEVFACCTHPVLSGPAKERIENSAIKE
                     LVVTNSIQLNDEQKPNNITELSVAELLAQAIVRVYERESVSVLFD"
     gene            3158..3808
                     /locus_tag="PTC28_000892"
     CDS             3158..3808
                     /locus_tag="PTC28_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HDK5716201.1"
                     /translation="MASLKSIIRQGKQTRGDLRKIREAGKVPAVVYGYGTKNVSVKVD
                     EVEFIKLIREVGRNGVIELGVGSKQIKVMVSDYQYDSLKNQITHIDFLAINMTEERTV
                     EVPVHLIGEAPGAKEGGVVEQPLFNLEITATPDSIPEYIEVDISELNINDSLSVADVK
                     VSGDFTIENEAEDTIVSVVAPTEEPTEEEIEAMEGASTQEEPEVVGESSEEEAKEE"
     gene            4268..4840
                     /locus_tag="PTC28_000893"
     CDS             4268..4840
                     /locus_tag="PTC28_000893"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016426510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDK5716202.1"
                     /translation="MKCIVGLGNIGKKYEYTRHNIGFEVIDHLLDRHQIKLDKQKFRG
                     AYTIERINGEKVMLIEPLTLMNLSGEAVAPLMDYYDVEVDDLLVLYDDLDLAQGHVRL
                     RQKGSAGGHNGMKSIIQMLGTSDFKRIRIGIDRPSNGMAVKDYVLQRFSTNEMKVMDT
                     VIQHVADAVEAFIGNEKFENVMNRYNGEAK"
     gene            4837..8349
                     /gene="mfd"
                     /locus_tag="PTC28_000894"
     CDS             4837..8349
                     /gene="mfd"
                     /locus_tag="PTC28_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019835392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HDK5716203.1"
                     /translation="MKSIINEIINRDSRFKDLAEQVGQSNVLVTGLTPAAKASIIAEL
                     YQSDHRQVVLVTNNLYQADKIEADLLQFVPDDEVYKYPVQDMMTEEFSTQSPELMSER
                     VRTLTALANDRRGLFIVPLNGLKKLLTPKEMWRDHQMTFEVGDDIEIDALLEKLVSMG
                     YRRESVVSNIGEFSVRGGIIDVYPLLGEPIRIELFDTEVDSIRQFDVETQRSSENIDS
                     AEITTAHDYIMTEAVRQQMMTALKSAYETTRPKIDKSVRQDLKETYDSFQMVEDTHFD
                     PQILRRLVAFMYEKPTTILDYLKDNAIILVDEYNRVRETEESLSVETEDFLQNLIESG
                     KGFIGQRFMDDEAFDRMLRQFKITFFTLFTASMQMKLDDMIKFSCKPVQQFYGQYDIM
                     TSEFQRYMRQEDRVVVMVETATKKERIQAMLSEMHIPTLLEPDVDTMAAGHAAIIEGS
                     LSEGFELPYMSLVVVTERELFKSKQKKSTKKRRKTLSNAEKIKSYQELNVGDYVVHVH
                     HGVGRYLGVETLAVGDVHRDYIKIQYQGTDQLFVPVDQMEQVQKYVGSEDKSPKLYKL
                     GGSEWKKTKAKVQRSVEDIADELIALYKEREQSVGYQFGPDTAEQYAFEMDFPYDLTD
                     DQAKSIIEIKNDMESQRPMDRLLCGDVGYGKTEVAVRAAFKAVMSGKQVAFLVPTTIL
                     AQQHYETLIERMRDFPVEIHLMSRFRTPKEVRETKEGLKSGFVDIVVGTHKLLGKTVE
                     YKDLGLLIVDEEQRFGVRHKEKIKQLKANVDVLTLTATPIPRTLHMSMLGVRDLSIIE
                     TPPENRFPVQTYVLEQNTNFIKEALERELSRDGQVFYLYNRVSSIYEKREQLQMLMPD
                     ASIGVAHGQLPERDLEETMLDFINGEYDILVTTTIIETGVDVPNANTLIIEDADRFGL
                     SQLYQLRGRVGRSSRIGYAYFLHATNRVLNEVAEERLQAIKEFTELGSGFKIAMRDLN
                     IRGAGNLLGKQQHGFIDSVGFDLYSQMLEEAVNEKRGIKEETPVPELELDLKLDAYLP
                     AEYIRNEQAKIEIYKKLRATESMEQLMDIKDELLDRFNAYPTEVEQLLDSVEIKVHLL
                     HVGVQSVKDTGKTIEILLTPKGTNDIDGEALFKNTIALGRAMKVGVQDGCMKVTLTKG
                     KQWLESLKFLAKTLEESLRLPHEI"
     gene            8339..9871
                     /locus_tag="PTC28_000895"
     CDS             8339..9871
                     /locus_tag="PTC28_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HDK5716204.1"
                     /translation="MKSNTAFNGVVVLTLGLIVVKVLSALYRVPYQNVLGDEGLYAYQ
                     QIYPIVALGVVLSSNALPSAYTQMLGHQRVSKPFFIRLCRILTSVGIVICALMFIGAK
                     VVALLMGDPQLTPMIRAASFSFVSVGALGLLRGYFQSKYEMHMPAYSQVLEQLVRVGL
                     IGVVIGLFVFQDLSIYQAGTWAIVASTAGFVVATVLLAFKSHLSTTSIDQENLQWRRF
                     FIATVVFAISHLIVILWQVVDSFTIVNMLRYGTGLTFDEAITQKGIFDRGASFIQMGL
                     IVTTTFCFVLIPLLTDTKKNGQRQQMYSYANASLKITIVISSASGIGLINLIPLLNRV
                     FFERAELTGTLSLYMLTVICVSLIMMYIALLEVHEEFRMIMKALVIGIVTKGVLNIIV
                     IPLFGILGASVATVSSLVVFVVVLHHRVVQLYRLHALRKFYVKLVLALLVMTTVVQLC
                     HYLIPTETRFGGLIELLIAAMVGVGTIVFMLLYLNILSEEEWIHLPFGDKVISWEKGR
                     KS"
     gene            9868..11052
                     /locus_tag="PTC28_000896"
     CDS             9868..11052
                     /locus_tag="PTC28_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide pyrophosphohydrolase"
                     /protein_id="HDK5716205.1"
                     /translation="MTHQLTIIGLGNYGLDELPVSIYKLIQQQAKIYVRTKNHPVIAQ
                     LEGIAIESFDDVYEAHETFEPVYQAITERLFEYAQHEDIVYAVPGHPRVAETTTQLLL
                     QNALKHNVAVKVLGGRSFIDDVFEAVDVDPNDGFTMLDATALTVDMLNPRTATVITQV
                     YSDMVAGNLKLSLMERYPDDFEVMVVDGAHQGGAQVTRCPIYALDHDVTYTNLTSVFV
                     PKVTDETALYGDFDYADQVIARLVDDEHGCPWDKVQTHQTLKRYLLEETYELFEAIDN
                     EDDWHMIEELGDILLQVLLHTNIGRKEGYMDTREVVVSLTEKMIRRHPHIFGDESAQN
                     VDDVKSIWQTEKQAEGKKERVKFEKVFATYFLKLYDEVKNKDFTEEELKAYIEQGGNY
                     ET"
     gene            11042..11299
                     /locus_tag="PTC28_000897"
     CDS             11042..11299
                     /locus_tag="PTC28_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HDK5716206.1"
                     /translation="MRLDKYLKVSRLIKRRTLAKELSDQGRVAVNGHTAKAGTDVKID
                     DELVIQFGQKIVTVKVTGLNEHATKENAKGMFELVKEARIQ"
     gene            11327..11716
                     /locus_tag="PTC28_000898"
     CDS             11327..11716
                     /locus_tag="PTC28_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HDK5716207.1"
                     /translation="MAQKIQNIGNQYTSQKNAKKQRHERRKKVVKKRISVFGGILLAI
                     IIVLLIMLMVQVKGNHEASVERQKKEAQYQKLQDQEIELKEQLNNLNDEAYVEKIARD
                     EYYLSNDGEIIFKLPEDAKNDKQSGKK"
     gene            11856..12233
                     /locus_tag="PTC28_000899"
     CDS             11856..12233
                     /locus_tag="PTC28_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein S1"
                     /protein_id="HDK5716208.1"
                     /translation="MSIEVGSKLKGKVTGIKKFGAFVELPEGKSGLVHISEVADNYVE
                     NVEDHLTVGDEVEVKVLSIADDGKISLSIKKAKERPRKQKPAQKPEDFEKKLSNFLKD
                     SEDRLTSIKRQTESRRGGRGSRR"
     gene            12316..13605
                     /gene="tilS"
                     /locus_tag="PTC28_000900"
     CDS             12316..13605
                     /gene="tilS"
                     /locus_tag="PTC28_000900"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HDK5716209.1"
                     /translation="MQQNWKATDHIVVAVSTGIDSMVLLHQLLYDETLTYRQLTCLHV
                     HHGLREASEQEATFIQHYCEQHDIPFYMKRLDLSDVVAEGRSIQNDAREMRYQWFDTM
                     MHQLDADGLLTAHHEDDQVETIFYRLFTGKSTRSSLGMSTIEARNGYRLYRPLLNTSK
                     HVIRAYQQQHDVPYFEDTSNASNTYVRNDIRNRILPQIDENAQLKSQQLLKLKAWYDE
                     AFMLMQHEVDNFIERFVTTNAHSFTVSRYAFNALTYHVKILTLDTLLHQFEDTVTISE
                     RAYADWLQKLAGPVAQTQLMHTNQWHADIVYDKLVIMAPMQKSLDTYTIQVTEAGTYR
                     FGCYDVQITDMTDLPGSKLCIRSRQPGDRIARHDGHHKKVSRLMIDAKVPAYLRAQIP
                     IIETTHGDILAVGTLYIQQHYQGVIKIQFMGDDIHEK"
     gene            13595..14134
                     /gene="hpt"
                     /locus_tag="PTC28_000901"
     CDS             13595..14134
                     /gene="hpt"
                     /locus_tag="PTC28_000901"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017722022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HDK5716210.1"
                     /translation="MKNDVKEVLLTEEDIQQICRTLGETITADYQGKDLFCVGILKGS
                     VLFMTDLIKHIDLPLAIDFMDVSSYHGGTESTGEVQILKDLSSSIENKDVLIVEDILE
                     TGTTLKSITELLQSRRVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVIGYGLDYQ
                     EKYRNLPYIGTLKSEVYAK"
     gene            14250..16364
                     /gene="ftsH"
                     /locus_tag="PTC28_000902"
     CDS             14250..16364
                     /gene="ftsH"
                     /locus_tag="PTC28_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HDK5716211.1"
                     /translation="MQKAFRNVLFIAIVGVVIFGLFSWINGNGNVPKELTYTQFIQKL
                     DNGELKSLEIQPENNVYKVSGKLKNNDDYASTILFNNDQELNKVTETAKDQKGLDFTV
                     KEEEGQSVFVSIISTLIPVLVIALLFIFFLSQAQGGGGGGRMMNFGKSKAKMYDSQKG
                     RVRFTDVAGADEEKQELIEIVDFLKDNKKFKQMGSRIPKGVLLVGPPGTGKTLLARAV
                     AGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAG
                     VGGGHDEREQTLNQLLVEMDGFGENEGIIMIAATNRPDILDPALLRPGRFDRQIQVGR
                     PDVTGREAILHVHAKNKPLDETVDLKAIAQRTPGFSGADLENLLNEASLIAARSGKKK
                     IDMRDIEEATDRVIAGPAKKSRVISEKERNIVAHHEAGHTIIGMVLDEAEVVHKVTIV
                     PRGQAGGYAMMLPKQDRFLMTEPELLDKICGLLGGRVAEDIIFNEVSTGASNDFERAT
                     QIAREMVTKYGMSKKLGTVQFSHGGGQVFLGKDMSGEPEYSGQIAFEIDKEVQRIIKE
                     QYERCKQILLDHESQLKLIAKTLLTEETLVAEQIQSLFHEGHLPEVNYDDAKVVNHSE
                     NKAFDEGKYGKSYDDIRREQQELTGRANRDQSERRNEDETTNETEPKDSEDTQQNDNG
                     DTTGYEQEPNIDRPGNDQPPRQ"
     gene            16819..17703
                     /gene="hslO"
                     /locus_tag="PTC28_000903"
     CDS             16819..17703
                     /gene="hslO"
                     /locus_tag="PTC28_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HDK5716212.1"
                     /translation="MTHDYLVKALAFNGEIRAYSVNATETIQEAQKRHYTWPTASAAL
                     GRTMTASLMMGAMLKGDQKLTVTVDGDGPIGKIIADADAKGKVRGYVTNPQTHFPLNE
                     QGKLDVRRAVGTTGAINVVKDVGMRDYYTGSSPIISGELGEDFTYYFANSEQVPSSVG
                     VGVLVNPDNSIKAAGGFILQVMPGAKDETIDRLEAAISTMKPVSTLIDEGLTPEEMLE
                     TILGKDNVTILESMPTEFECNCSHDKFLNAIKGLGQAEIEDMIAKDHGAEAECHFCRS
                     RYSFSEDELKALLAEMPS"
     gene            18227..19156
                     /gene="cysK"
                     /locus_tag="PTC28_000904"
     CDS             18227..19156
                     /gene="cysK"
                     /locus_tag="PTC28_000904"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HDK5716213.1"
                     /translation="MVRKPVDNITDIIGQTPVVKLRHQAGEDAADIYVKLEYQNPGGS
                     VKDRIALAMIEQAEKEGKIKPGDTIVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSM
                     ERRNLLKAYGAELVLTPGAEAMKGAIKKAKELKETHGYFEPQQFENPANPKVHELTTG
                     PELVEQFEGRTIDAFLAGVGTGGTLSGAGKVLKEKYPDIQIVAIEPEDSPVLSGGEPG
                     PHKLQGLGAGFIPGTLNTEIYDEIIKVGNEVAMETSRRVAKEEGILGGISSGAAIYAA
                     IQKAKELGKGKTVVTVLPSNGERYLSTPLYNFE"
     gene            19378..20181
                     /gene="folP"
                     /locus_tag="PTC28_000905"
     CDS             19378..20181
                     /gene="folP"
                     /locus_tag="PTC28_000905"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HDK5716214.1"
                     /translation="MPQTQIMGILNVTPDSFSDGGRFNEVDRAVEHGTKMVEQGAHII
                     DVGGVSTRPGHEEVTEEVTVEEELARVIPVVKALQHLDVTISVDTFRSEVAEAALEAG
                     ATMINDQWAGLYDSRMFQVVAKYDAEVILMHNGDGERNVPVMDEMLVMLLKQANKAVL
                     AGIDRERIWLDPGIGFATTREEEQEVMSRLDELVATGYKVLLATSRKRLIKFLLGGDN
                     QVDERDEATAATTAYGIMKGVHGVRVHNVLMNARLAKTMDALKGYEDGR"
     gene            20171..20542
                     /gene="folB"
                     /locus_tag="PTC28_000906"
     CDS             20171..20542
                     /gene="folB"
                     /locus_tag="PTC28_000906"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HDK5716215.1"
                     /translation="MEDKIFLKGLEFYAYHGALPAENEIGQIFTVDVEMKVDLSVAGT
                     SDRVEDTVHYGEVYEDIKAIMHGSAVQLIEHLAERIALRINSHYNRVMETKVRITKKN
                     PPIPGYYQGVGVEIVRANHHD"
     gene            20535..21020
                     /gene="folK"
                     /locus_tag="PTC28_000907"
     CDS             20535..21020
                     /gene="folK"
                     /locus_tag="PTC28_000907"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HDK5716216.1"
                     /translation="MIDVYLGLGSNMGDREAQLKAAIDLLDAHDKINVVAISPIYETK
                     PVGYTEQPDFLNLCLHIQTQLSAQDLLKVALETEAELHRVRKVRWGPRTMDIDILLYG
                     DEIIEEDDLTVPHPRMTERAFVMVPLNDIAANVTEPHSGQKIQQIVPHDDTVVKYKAI
                     L"
     gene            21065..22057
                     /gene="dusB"
                     /locus_tag="PTC28_000908"
     CDS             21065..22057
                     /gene="dusB"
                     /locus_tag="PTC28_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HDK5716217.1"
                     /translation="MWKIGDVEIENRVVLAPMAGVCNSAFRLTVKEFGAGLVCAEMVS
                     DKAILFNNPKTMKMLYIDENERPLSLQIFGGEKETLVEAAEYVDKNTTADIIDINMGC
                     PVSKIIKCEAGARWLLDPNKIYEMVSAVTERVSKPVTCKMRIGWDEDHIFAVENAKAA
                     ERAGAAAISLHGRTRVQMYEGKADWDIIRQVKEAVNIPVIGNGDVTSPELAEKMLKET
                     GVDAVMIGREALGNPWMIYRTVHYLETGELIDEPQIDEKIEIALLHLNRLVDLKGEKV
                     GVMEMRKHASWYLKGVRGNGKARKALNQAETLAEMTEILTEFRDEQMEKQKIEA"
     gene            22080..23567
                     /gene="lysS"
                     /locus_tag="PTC28_000909"
     CDS             22080..23567
                     /gene="lysS"
                     /locus_tag="PTC28_000909"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HDK5716218.1"
                     /translation="MTEELNDQMQVRRQKLQELRDLGIDPFGEKFERTGTAETLKAQW
                     DQYAKEELAEKETESHTVIAGRIMTKRGKGKAGFAHVQDLSGQIQIYVRKDQVGDAQF
                     GIWNTADLGDIVGVEGIMFKTNTGELSVKAKSFKLLSKALRPLPDKHHGLQDIEQRYR
                     QRYLDLITNEESTQTFINRSRILQEMRNYLNEKGFLEVETPMMHQIAGGAAAKPFVTH
                     HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAY
                     ADYKDIMSLTEELVAHIARRVLGTTSVQYGDETINLEPQWRRLHMVDAVKEATGVDFY
                     EVKSDKEAHELAKAHGIEVDDNMKYGHILNEFFEQKVEETLIQPTFIYGHPIEISPLA
                     KKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRQRFEAQLVEKEQGNDEAHEMDE
                     DFIEALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPYMRQK"
     gene            23979..24093
                     /gene="rrf"
                     /locus_tag="PTC28_000910"
     rRNA            23979..24093
                     /gene="rrf"
                     /locus_tag="PTC28_000910"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            24103..24178
                     /locus_tag="PTC28_000911"
     tRNA            24103..24178
                     /locus_tag="PTC28_000911"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:24136..24138,aa:Val,seq:tac)
     gene            24181..24256
                     /locus_tag="PTC28_000912"
     tRNA            24181..24256
                     /locus_tag="PTC28_000912"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:24214..24216,aa:Thr,seq:tgt)
     gene            24263..24338
                     /locus_tag="PTC28_000913"
     tRNA            24263..24338
                     /locus_tag="PTC28_000913"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:24296..24298,aa:Lys,seq:ttt)
     gene            24354..24428
                     /locus_tag="PTC28_000914"
     tRNA            24354..24428
                     /locus_tag="PTC28_000914"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:24386..24388,aa:Gly,seq:gcc)
     gene            24437..24525
                     /locus_tag="PTC28_000915"
     tRNA            24437..24525
                     /locus_tag="PTC28_000915"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:24471..24473,aa:Leu,seq:taa)
     gene            24537..24613
                     /locus_tag="PTC28_000916"
     tRNA            24537..24613
                     /locus_tag="PTC28_000916"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:24571..24573,aa:Arg,seq:acg)
     gene            24623..24696
                     /locus_tag="PTC28_000917"
     tRNA            24623..24696
                     /locus_tag="PTC28_000917"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:24657..24659,aa:Pro,seq:tgg)
     gene            24714..24789
                     /locus_tag="PTC28_000918"
     tRNA            24714..24789
                     /locus_tag="PTC28_000918"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:24747..24749,aa:Ala,seq:tgc)
BASE COUNT         8022 a         4249 c         5795 g         6808 t
ORIGIN      
        1 ctataggggg ctcactacat gaaagtgaca gacgttagac ttagaaaaat acaaacagat
       61 ggcagaatga aagctttagt gtcaattacc ttagatgaat cattcgttat tcacgatttg
      121 agagtgattg aaggtaattc aggcttattc gtagctatgc caagtaaacg cacaccagat
      181 ggtgaattcc gtgatatcgc tcatccaatc aactctgaaa tgagacaaga gattcaagat
      241 gcggtaatga aagtatatga tgaaactgat gaggttttac ctgctcaaaa accaacatca
      301 gatgcgtcag aagataaaga agaagttgaa tagttttttc tttttatgag gttttgtcat
      361 tgtggtgatg gcaaagcctt ttttattacg aagaagttgt ctagtaatca ttttttattg
      421 ggtggcatca aatttttatc taagtggaag tgaaagtggt atcgataaaa tcgtttcacg
      481 gcgcatggtg accaacggat agctagaatg tctaaggtgt tgaaagggct tttataggtt
      541 tacgccttga aagtgtgtgc acggttaaat tataattgta tagaagtgta taagataatg
      601 gagggttcat tgccatgcaa aaacatgcaa tcgttttagc agcgggtaaa ggcacaagga
      661 tgaaatcgaa gcaagctaaa gtgctgcatc aagttgccgg gaagccgatg attggtcatg
      721 tcattgatca agtgcgtgct tctggtgtcg atcaagttgt cactattgtc ggtcacggcg
      781 cggaaagtgt aaaagagaag ttaggggata cttctttata tagctttcaa caagaacaac
      841 ttggtacggc acacgctgta aagacagcag ctgagcattt atcagcaaaa gaagggatta
      901 cacttgtcgt ttgtggtgac acaccgttaa ttacaagtgc aacattgtct cgtttggtgg
      961 cacatcacga acaagaaggc gcacaagcta ctgtattgtc agcgacagcg tctcaaccgt
     1021 ttggctatgg tcgtattgtc cgtgatgtac aaggtcaatt gatggaaatt gttgaagaaa
     1081 aggatgccaa tgacagtcag aaagcgatca ctgaaatcag ttcgggtatt ttcgcttttg
     1141 ataatcagac gctatttgag atgttagaac gtgtggataa caacaatgcg caaggtgaat
     1201 actacttgcc gcaagtttta acgttaattc ttcaaaataa gggtaaagtc gcagtttatc
     1261 atacggatga tttcgaggag attatgggtg tcaatgatcg tgtggcgtta agtcgagctg
     1321 aaaaagcttt tcgccaacgt atcaatacgt accacatgca aaatggcgta accttgattg
     1381 atcctgattc aacttatatt ggtgctgaag ttgaaatcgg tgcagatacc attatcgagc
     1441 aaggtgttca attgtcggga cataccgttg tcggtgaagg tgtcacagta ggtcaatatt
     1501 ctcaagtaca caatagtcac atttatgacg ctgtgacgat taagcattcg gtgattactg
     1561 atgcagtcgt tggtgccaag tctacagtag ggccattcgc acaattacgt ccaggcgcag
     1621 atttgggcaa agaaacgaaa gtcggcaact ttgttgaaat taaaaaagcg cgcttagacg
     1681 acgaagcaaa agtatcacat ctcagttata ttggcgatgc agaaattggg gcaagaacga
     1741 atgtcggttg cggttccatc actgtgaact atgatggtgt caataagctt aaaacgattg
     1801 taggtaaaga tgcgtttatc ggctgtaata cgaatctcat cgcaccagtg actgtaggag
     1861 acggatcgct tattgcggca ggttctacaa ttacagacga tatccctgaa aatagcttag
     1921 cactcgcgcg ctcaaaacaa gtgacaaaac cgggatacat gactcaaaaa gagcaatagt
     1981 ttcacatgaa agactaaaaa cggtctgttg taaataaaaa gagtgaccaa aacaaaattg
     2041 gaggattcat aataatgtta aacaccgaat ataaaaattc gtctttgaaa attttctcgt
     2101 tgaaaggtaa cgaaccactt gcacaagaag tcgcagatca tgtaggtgtt gaattaggta
     2161 aatgtacagt taaacgtttt agtgatggtg aaattcaaat taatattgaa gaaagtattc
     2221 gtggttgtga tgtgttcatt atccaaccga cttctaaccc tgtaaatgta catttgatgg
     2281 aacttcttat tatgattgat gcatgtaaac gtgcttcagc agcaaacatt actattgttg
     2341 tgccatacta cggttatgca cgccaagacc gtaaagcccg cagccgtgag ccaattacag
     2401 cgaagttagt tgctgattta ttcgaaacag ctggcgcgga tcgtatgatt gcattagatt
     2461 tacatgcacc tcaaattcaa ggattctttg atattccgat tgatcactta atgggtgtac
     2521 cgatcttagc ggactatttc ttgaaaaata aagaaatcga tccagaaaaa agtgttgttg
     2581 tatcaccaga ccatggcggt gtgacacgcg cacgtaaatt agcagatatt ctgaaaacac
     2641 ctatcgcaat tattgataaa cgtcgtccaa aaccgaatgt ggcagaagtg atgaatatcg
     2701 tgggtgaaat tgaaggacgt acagcgatta ttattgatga cattattgat acggcgggta
     2761 cgattacttt agcggcgcaa gcgttaaaag ataaaggtgc cacagaagta ttcgcatgtt
     2821 gtacacaccc agtattatca ggtccagcga aagagcgtat tgaaaattca gccattaaag
     2881 aattagtcgt aacgaactca atccaattaa acgacgaaca aaagccaaac aatattacag
     2941 aactttctgt agcagaattg ttagcacaag cgattgtacg tgtgtatgaa cgcgaatctg
     3001 tgagtgtatt atttgactaa tgcatgttga cttattatca gccctcgtgt aaaatgggtc
     3061 tgttcgtgtc aatacggaca aatacacact tgcaagcaac ataggttgat gggcaagtgc
     3121 agcacaacag tgtgcaatgg aaaggtggaa aatgaatatg gcttcattaa agtctattat
     3181 tcgtcaaggt aaacaaactc gcggtgactt acgtaagatc cgtgaagcag gtaaagtacc
     3241 agcagttgtt tatggttacg gtactaaaaa cgtatcagtt aaagtagatg aagtagaatt
     3301 catcaaattg attcgtgaag ttggacgtaa cggtgtgatt gaacttggtg taggttcaaa
     3361 acaaatcaaa gtaatggtat cagattatca atacgactca cttaaaaacc aaattacaca
     3421 tattgacttc ttagcaatca atatgactga agagcgtact gtagaagtac ctgttcactt
     3481 aattggtgaa gcacctggtg ctaaagaagg tggcgtagtt gaacaaccat tattcaactt
     3541 agaaattact gctacaccag acagcattcc tgaatatatc gaagtggata ttagcgaatt
     3601 aaacatcaac gacagcttat cagtagctga cgttaaagtt tctggtgact tcactatcga
     3661 aaacgaagct gaagatacaa tcgtttcagt tgttgcacct actgaagagc caactgaaga
     3721 agaaatcgaa gcaatggaag gcgcatctac tcaagaagag ccagaagttg tgggtgaatc
     3781 ttcagaagag gaagcaaaag aagaataaaa atgatatcaa tatcattgca agaagagctg
     3841 agccttatgg gtgtcagctc tttttagcgt tgtcgttaac ttttggttca aggcgacacg
     3901 atggagacaa atgttaaaaa aggggcgtac caagcgatgg cccttttttg aaatggccaa
     3961 tgaaaaagaa tgcctgctga aaagtagttc aatatgagaa acgtgaaaaa agcattcgtg
     4021 atttgtgccg ttgcataatg tgaaaagaca tgattaatgg tgttaaacgt ggcatgaacg
     4081 cctattcgga tttgaatgtc atcgtatcgc gatttcgaat tttcgataag ttgtgagtgt
     4141 ttcgaataga agttctataa taggaatagg acgattcacc aagttcaagg tcaaatgtgt
     4201 taatataggg atattaaacg caaatgatga atagagcgta ggagaaagac aaacatggag
     4261 gtcaatgatg aagtgtattg taggcttagg taatataggg aagaaatatg aatatacgag
     4321 acataatatc ggttttgaag tcatcgatca tctacttgat agacatcaaa tcaaacttga
     4381 caagcaaaag tttcgtggtg catatacgat agagcgcatc aatggtgaaa aagtgatgct
     4441 catcgaacca ttgactttga tgaatttgtc aggtgaagca gtggcccctc tgatggatta
     4501 ctatgatgtt gaggttgatg atttgctcgt attgtacgat gatttagatt tagcacaagg
     4561 tcatgtacgt ttgcgtcaaa aaggcagcgc tggtggtcat aacggcatga aatcaatcat
     4621 ccaaatgtta ggcacgagcg actttaaacg gattcgtatt ggtatcgatc gtccttcgaa
     4681 tgggatggcg gtcaaggatt atgtattaca gcgcttttca accaatgaaa tgaaagtgat
     4741 ggatacagtc attcaacatg tggcagatgc agtggaagca tttataggaa acgaaaaatt
     4801 cgaaaatgta atgaatcgat ataatggtga ggctaagtga aatcaataat caatgaaatt
     4861 ataaatagag actcgagatt taaagattta gcagagcaag tcggtcaatc caatgtgctc
     4921 gtgacaggat taacccctgc cgcgaaagca tctatcattg cggaacttta tcaatcggac
     4981 caccgccaag ttgttttggt tacaaataat ttatatcagg cggacaagat tgaagcagat
     5041 ttattacagt ttgttccgga tgatgaagtg tataaatatc ctgttcaaga tatgatgaca
     5101 gaagaatttt caacgcaaag cccagaattg atgagtgaac gcgtacgaac gttaacagca
     5161 ctcgcgaatg atcgtcgcgg gttatttatc gtccccttaa atggcttgaa aaagttgctc
     5221 acacctaaag aaatgtggcg tgaccatcaa atgacttttg aagtgggcga cgatattgag
     5281 attgacgcgc ttttagaaaa attagtgagc atgggatacc gacgtgaatc ggtcgtgtcc
     5341 aatattggtg aattttcggt gcgtggtggc attattgatg tgtatccgtt actaggtgaa
     5401 ccgattcgaa ttgaactgtt cgatacggaa gtggattcga ttcgtcaatt cgatgtagaa
     5461 acgcaacgtt catcagaaaa tatcgacagc gcggaaatta cgacagcgca cgattatatt
     5521 atgacagagg ccgtccgaca acagatgatg acagctttga agtctgctta cgaaacgacg
     5581 agacctaaaa ttgacaagtc agtacgccaa gatttgaaag agacgtatga tagttttcaa
     5641 atggttgagg atacgcattt tgatccccaa atattgcgtc gtttagttgc atttatgtat
     5701 gagaagccta caaccatttt agattacctt aaagataatg cgatcatttt agttgatgaa
     5761 tacaatcgtg ttcgcgaaac tgaggaatct ttgtcggttg aaactgaaga ctttttacaa
     5821 aatttgattg aaagtggtaa aggctttatc ggacagcgtt ttatggatga tgaggcattt
     5881 gatcgaatgt tacgccagtt caaaattacg tttttcacgt tatttactgc ctcaatgcaa
     5941 atgaagttag acgacatgat taagttttca tgtaaaccgg tccaacaatt ttacgggcaa
     6001 tacgacatca tgacttctga atttcaacgc tatatgcgac aagaagaccg tgtcgtcgtc
     6061 atggtagaaa cggcaacgaa aaaagaacgt attcaggcga tgttaagcga aatgcatatc
     6121 cctacactgt tagagcctga cgttgacaca atggcggcgg gacatgcggc aatcattgag
     6181 ggcagcttat cagaaggctt cgaactccct tacatgtcgc tcgttgtggt gacagaacgt
     6241 gaattgttta agtctaagca gaaaaagagc acgaaaaagc gtcgtaaaac attaagtaat
     6301 gcggaaaaaa ttaaatcata ccaagaattg aatgtcggcg attatgtcgt gcacgtgcat
     6361 catggtgtag gtcgctacct cggcgtggaa acactagcgg taggtgatgt acaccgcgac
     6421 tatattaaaa ttcaatatca aggcacagac caactctttg tacctgttga tcaaatggag
     6481 caagtgcaaa aatatgtagg ttcggaagat aaatcgccaa agctgtataa gttaggcggt
     6541 agtgaatgga agaaaacgaa agcgaaagtt cagcgcagtg tagaagacat tgcggacgaa
     6601 ctgatagctt tatataaaga acgcgaacaa tctgtcggtt atcaatttgg gccagataca
     6661 gcagaacaat atgcgtttga aatggacttc ccatatgatt taacggatga ccaagcgaaa
     6721 tcgattatcg aaattaaaaa tgacatggaa agccaaagac ctatggaccg tctgttatgc
     6781 ggtgacgtag gttacggtaa aactgaagtg gctgtcagag cggcgttcaa agcagttatg
     6841 tcagggaaac aggtcgcatt tttagtaccg acaaccattt tagcgcaaca acattatgaa
     6901 acgttgattg agcggatgcg tgatttccct gtcgaaattc atttaatgag ccgcttccgt
     6961 actcctaaag aagtgcgcga gacaaaagaa ggtttgaaat caggctttgt ggacatcgtt
     7021 gtagggacac ataaattact cggtaaaaca gttgagtata aagatttagg tttactcatt
     7081 gtcgatgaag aacagcgctt tggtgtgcgt cataaagaaa aaattaagca gttaaaagca
     7141 aatgtcgatg tactgacatt aactgcgaca ccgattccgc gtacgttgca tatgagtatg
     7201 ttgggcgtgc gtgacctgtc gattattgaa acaccaccag aaaaccgttt cccagtccaa
     7261 acgtacgtcc tagagcaaaa cactaacttt attaaagaag ctttagaacg ggaactttct
     7321 cgagatggcc aagtgtttta tctctacaac cgtgtcagtt ccatatatga aaaacgtgaa
     7381 cagcttcaaa tgttgatgcc agacgcttca attggtgtcg cgcacggtca attgccagaa
     7441 cgtgacttgg aagaaacgat gctcgacttt attaatggag agtacgacat tttagtgacg
     7501 acgacgatta tcgaaacagg tgtcgatgta ccgaatgcaa atacactcat tattgaagat
     7561 gccgatcgtt ttggcttgag ccagctgtac caattacgtg gacgtgtcgg tcgttcgagc
     7621 cgtatcgggt atgcgtattt ccttcacgca acgaaccgtg tattgaatga agttgctgaa
     7681 gaacgtctcc aagcaattaa agaatttacc gaacttggca gtggctttaa aattgcgatg
     7741 cgtgacttga acattcgggg tgcaggtaac ttactcggta aacaacagca cggtttcatt
     7801 gattcggtcg gctttgactt gtactcacaa atgttagaag aagcggtgaa cgaaaaacgt
     7861 ggcattaaag aagaaacgcc ggttcctgag cttgagttag atttgaaact cgatgcatat
     7921 ttaccagctg aatacattcg taatgaacaa gcgaaaattg aaatttacaa gaagttgaga
     7981 gcgactgaaa gtatggagca attgatggat attaaagatg aattgcttga tcgtttcaat
     8041 gcgtatccaa cagaggttga gcaattgtta gattctgtag agattaaagt ccatctcctt
     8101 cacgtcggtg tgcagtccgt gaaagataca ggcaaaacga ttgaaatttt attgacccca
     8161 aaaggtacaa atgatattga cggtgaagcg ttatttaaaa atacaatcgc gctcggtcgt
     8221 gcaatgaaag tcggcgtaca agatggctgt atgaaagtga cgttgacaaa aggaaaacaa
     8281 tggctcgaat cactgaaatt tttagcgaag acgttggaag aaagtttgag actcccgcat
     8341 gaaatctaac acagcattta atggtgtcgt cgtcctgacg ttaggattga ttgtcgtcaa
     8401 agtattgagt gctttgtatc gggtacctta tcaaaatgta ctcggtgatg aaggattgta
     8461 tgcgtatcaa caaatttatc ctattgtcgc attaggtgtg gtcttgtcga gcaatgcgtt
     8521 gccgagtgcg tatactcaaa tgttagggca tcagcgtgta tcaaaaccat tcttcattcg
     8581 gttatgtcga atattgacaa gtgtaggtat agtcatttgc gcgctgatgt tcatcggtgc
     8641 gaaagtggtc gcgttgttaa tgggtgatcc gcaattaacg ccgatgattc gagcggcaag
     8701 tttcagtttt gtttctgttg gggcactcgg tttgttgcgt ggttattttc aatccaaata
     8761 cgaaatgcac atgcctgcgt attcacaagt gttggaacaa ttggttcgcg tcggtttaat
     8821 cggtgttgtg attggattgt ttgtctttca ggacttgtcg atttatcagg cgggaacatg
     8881 ggccattgtc gcgtcaactg caggttttgt agtagcgacg gtgttgttag ctttcaaaag
     8941 tcatctttct actacgtcta ttgatcaaga aaacttgcag tggcgtcgtt ttttcattgc
     9001 gacagtcgtc tttgcaatca gtcatttaat cgttatttta tggcaagtgg tcgatagctt
     9061 taccattgtg aatatgttgc gttacggtac tggactcacg tttgatgaag cgattacgca
     9121 aaaagggatt ttcgatcgtg gtgcgtcctt tattcaaatg ggacttatcg tcacaacgac
     9181 cttctgtttc gtgttaattc cactattgac agatacgaag aaaaacgggc agcgccaaca
     9241 aatgtatagt tatgcgaatg cctcactgaa gattacgatt gtgatcagca gtgcgagcgg
     9301 tattgggctg attaatttaa taccgttact taaccgtgtc ttttttgaac gcgcagaatt
     9361 gacaggcaca ttgtcgctat atatgttgac tgtcatatgc gtgtcactca ttatgatgta
     9421 catcgcgttg ctagaagtgc atgaagaatt tcgtatgatt atgaaagcgc tcgtcatcgg
     9481 aatcgttaca aaaggtgtgc tcaacatcat cgtgattccg ttgtttggta ttttgggtgc
     9541 aagtgtagcg acggtgagtt ctttagtcgt gtttgttgtg gtcttacatc atcgtgtcgt
     9601 acagctctat cgtcttcacg ctttgcgaaa gttttatgtg aaactggttt tagctttatt
     9661 ggtcatgaca actgttgtac aattatgtca ttatcttatt cctactgaga cacgtttcgg
     9721 aggtttgatt gaacttctta ttgcagcgat ggtcggcgtg ggtaccatcg tcttcatgct
     9781 cttgtacctc aatattttaa gtgaagaaga gtggattcat ttaccgtttg gcgacaaagt
     9841 catttcgtgg gagaaaggaa gaaagtcatg acacaccaac tgacaattat aggattaggg
     9901 aactacggtt tagacgaatt acccgttagt atttacaaat taattcaaca acaagctaaa
     9961 atttatgtgc gtacgaaaaa tcatcccgta atcgcacaat tagaaggcat cgcgatcgaa
    10021 agttttgacg atgtatacga agcgcatgaa acgttcgaac cagtgtatca agcgataaca
    10081 gagcgattgt tcgaatatgc gcaacatgaa gacattgtgt atgctgtgcc gggtcatccg
    10141 cgcgtggctg agacaacgac acagttattg ttgcaaaatg cactcaaaca caatgtggca
    10201 gttaaagtgt taggtggacg tagctttatt gatgatgtat ttgaagcggt cgatgtcgac
    10261 ccgaacgatg gctttacgat gttagatgca acagcgttaa cggtggacat gctcaatccg
    10321 cggacagcaa cagtcattac gcaagtttat agtgacatgg ttgccggtaa cttaaagtta
    10381 tccttgatgg aacgttaccc ggatgacttt gaagtgatgg tcgttgacgg ggcacatcaa
    10441 ggtggggcac aagtgacgcg ttgtccaata tatgcattag atcatgatgt gacgtatacg
    10501 aatttaacga gcgtctttgt gccgaaagtg actgatgaga cagccttgta tggtgacttt
    10561 gattatgcgg atcaagtgat tgcgcgttta gttgacgatg aacatggttg cccttgggat
    10621 aaagtccaaa cgcaccaaac gttaaagcgc tatttgcttg aagaaacgta cgagttattt
    10681 gaagcgatcg ataacgaaga tgattggcat atgattgaag agctcggcga catcttgtta
    10741 caagtgttgt tgcatacgaa tatcggtcgt aaagaagggt acatggatac gcgtgaagtc
    10801 gtagtaagtt tgactgaaaa gatgattcgt cgtcatccgc acatttttgg tgatgaaagt
    10861 gcgcaaaatg tcgacgatgt gaaatcgatt tggcaaactg aaaagcaagc agaaggtaaa
    10921 aaagaacgcg ttaaatttga gaaagtattt gcgacctatt tcttaaaatt gtatgatgaa
    10981 gtcaaaaata aagactttac ggaagaagaa cttaaagctt atatagaaca ggggggcaat
    11041 tatgagactt gataagtatt taaaagtgtc acgattaatt aaacgtcgta cactcgctaa
    11101 agaactgagc gatcaaggtc gtgttgcggt gaatgggcac actgccaaag cggggacaga
    11161 cgtgaaaata gatgatgagt tagtgattca atttggtcaa aaaatcgtta cggttaaagt
    11221 cacaggatta aatgagcatg cgacaaaaga aaatgctaaa gggatgttcg aactcgttaa
    11281 agaagcgcgc attcaataaa gggtaaataa agaaaggtga cgccccatgg cccaaaaaat
    11341 tcaaaatatc ggcaaccagt atacaagcca aaaaaatgct aaaaagcaac gacatgaacg
    11401 ccggaaaaaa gttgtaaaaa aacgcatctc tgttttcgga gggatattgc ttgccatcat
    11461 tattgtgctg ttaattatgt tgatggtaca agtgaaaggg aaccacgaag catcagtaga
    11521 acgtcaaaag aaagaagcac aatatcaaaa gttacaagat caagaaattg aattaaaaga
    11581 acaactgaac aatctgaatg atgaagcgta tgtcgaaaaa atcgcgagag atgagtacta
    11641 tttaagtaat gatggtgaaa ttatttttaa attaccagag gacgccaaga acgataagca
    11701 gtccgggaaa aagtagcaaa cttttagact tggattgtca acaagtaaaa aacgtaaaga
    11761 aaaaaggcga tgttcaattt gccattgtga aaacagttaa acaaacgtat aatagaacta
    11821 tatatcgaac taaagcggga ggatgcatta taacaatgtc aatcgaagta ggaagtaagt
    11881 taaaaggtaa agtcactggt atcaaaaaat ttggtgcatt cgtggagttg cctgaaggaa
    11941 aaagtgggct agttcatatt agtgaagtag cagacaacta tgtcgaaaat gtagaagacc
    12001 atttaacagt cggtgatgaa gtagaagtaa aagtattatc tattgcagat gatggtaaaa
    12061 ttagtttatc tattaaaaaa gcaaaagagc gcccgcgtaa gcaaaaaccg gcgcaaaaac
    12121 cagaagactt tgagaaaaag ctatctaact ttttaaagga tagtgaagac agacttactt
    12181 ctattaagcg tcaaacagaa tcaagacgtg gcggcagagg ttcacgtcgt taagtattga
    12241 taatcactta gaggttgaga aacgaaggat aactttgact ctcagcctct attttaatgt
    12301 aggagtggca tcgatatgca acaaaactgg aaggctacag accatatcgt cgttgcggtt
    12361 tcgacaggaa ttgatagtat ggtactgctg catcaattgc tatatgatga gacattaacg
    12421 tatcgccaat tgacttgttt acacgtacat catggcttga gagaggcgtc agagcaagag
    12481 gcaacattca ttcaacatta ctgtgaacag catgacattc cgttctatat gaagcgactg
    12541 gacttgtcgg atgtggtggc agaaggacga agtattcaaa atgatgcaag ggagatgcgt
    12601 tatcaatggt ttgatacgat gatgcaccaa ttggacgcgg acggtttgct cactgcgcac
    12661 cacgaggatg atcaagtgga aacgattttt taccggttgt ttactgggaa aagtacacgc
    12721 agttcgctcg gcatgtcaac cattgaagcg cgtaacggat atcgtttgta cagaccgttg
    12781 ttaaatacat cgaaacatgt cattcgagcg tatcaacagc aacatgatgt cccttatttt
    12841 gaagatacgt cgaatgcaag caatacctat gtccgcaatg atattcgcaa tcgaatcttg
    12901 ccacaaattg acgagaatgc gcagttaaag tcgcaacaat tgctaaaact taaagcgtgg
    12961 tatgatgaag cgttcatgtt gatgcaacat gaagtagaca actttatcga gcgatttgtg
    13021 acaacaaacg cacattcttt tactgtatca agatacgctt tcaacgcctt gacgtaccat
    13081 gttaaaatat taaccttgga tacattgttg catcaatttg aggataccgt tacgataagt
    13141 gagcgtgcgt atgctgattg gttacaaaaa ttagctggtc cggtcgcaca aacacaattg
    13201 atgcacacaa accaatggca tgctgatatc gtgtatgata aattagtaat aatggcgcca
    13261 atgcaaaaaa gcttagatac atatactata caggtgactg aagcgggaac gtatcgcttt
    13321 ggttgttatg acgttcagat tactgacatg actgatttgc ctggctcaaa attgtgcatt
    13381 cgttctcgtc aacccggcga ccgtattgca cgacatgatg ggcatcataa aaaagtatca
    13441 cggctgatga ttgatgcaaa agttcctgca tatttgagag cacaaatacc gatcatcgaa
    13501 acgacgcatg gagacatttt agctgtaggc acgttgtata ttcagcaaca ctatcaaggt
    13561 gtaattaaga ttcaatttat gggagatgac atacatgaaa aatgatgtaa aagaagtgtt
    13621 attaacggag gaggacattc aacagatttg tcgtacatta ggtgaaacaa tcacagcaga
    13681 ttatcagggg aaagatctgt tttgtgtcgg tattttaaaa gggtcagtct tattcatgac
    13741 agacttaatt aaacatatcg acttgccact tgcgattgat tttatggatg tatcaagtta
    13801 tcacggtggt acagaatcaa caggtgaagt acaaatttta aaagatttaa gttcatcaat
    13861 cgaaaataaa gatgtgttaa tcgttgaaga tattcttgaa acgggtacga cattaaaatc
    13921 tatcacagaa ttattacaat ctcgccgtgt gaactcatta gaaattgtga cattactcga
    13981 taaaccaaac cgtcgtaaag cggatattga agcgaaatat gttggtaaaa aaattcccga
    14041 tgagtttgtg attggctatg gtttggacta tcaagaaaag tatcgtaact taccttatat
    14101 tggtacgcta aaatctgaag tgtacgcaaa ataatcgcgt tgaatggggc atgtccctag
    14161 cgttgataaa agtcaattac tagccatttg tgtaacaatt atggtaaaat ttttattagt
    14221 tttatatttg aagtaggagg aaacgacgca tgcagaaagc ttttcgtaat gtgctgttta
    14281 tagccattgt cggcgttgtt atctttgggc tattttcatg gattaacggc aatggaaatg
    14341 tacctaaaga gttaacttac acgcaattta ttcaaaagtt ggataatgga gaactgaaat
    14401 ctttagaaat tcaaccagaa aataatgttt ataaagtgag cggtaagtta aaaaataatg
    14461 acgattatgc ctcaacaatt ttgtttaata atgatcaaga attgaataaa gttactgaaa
    14521 cagccaaaga ccaaaaagga ttagatttta ctgttaaaga agaagaagga cagagtgtat
    14581 ttgtaagtat tatttctaca ttaattcctg ttttagtgat tgctctactc tttattttct
    14641 tccttagcca agcacaaggc ggcggtggtg gcggtcgtat gatgaacttt ggtaagtcca
    14701 aagcgaaaat gtacgatagt caaaaaggcc gtgtacgctt cacagatgtt gcgggagcag
    14761 atgaagagaa acaagaactc attgaaattg ttgacttttt gaaagataac aagaaattca
    14821 aacaaatggg ttcacgtatc ccgaaaggtg tcttattagt agggccacca ggtacaggta
    14881 aaacattgct tgcacgtgca gtagcgggtg aagcaggtgt gccgttcttc tcaattagtg
    14941 gttcggactt tgttgagatg tttgtcggtg ttggtgcgag ccgtgtccgt gatttattcg
    15001 aaaatgcgaa gaaaaatgcg ccgtgtatca tttttataga tgagatcgat gcagtgggtc
    15061 gtcaacgtgg agcaggtgtt ggcggtgggc atgatgaacg tgaacaaaca ttaaaccaac
    15121 ttcttgtaga gatggatggt tttggtgaaa atgaaggtat catcatgatt gcggcgacaa
    15181 accgtcctga catcttagac cctgcgttat tacgtccagg ccgttttgac cgtcaaattc
    15241 aagtcggacg tccagatgtg acaggccgtg aagccatttt acatgttcat gctaaaaaca
    15301 agcctttaga cgaaacagta gaccttaaag cgattgcaca acgtacaccg ggcttctctg
    15361 gtgcggattt agaaaactta ctcaacgaag cgtctttaat tgcggcgcgt agtggtaaga
    15421 aaaaaatcga tatgcgtgat attgaagaag cgacagaccg cgttattgca ggtccagcta
    15481 aaaaatcgcg tgtcatttct gaaaaagaac gtaatatcgt tgcccatcat gaagcaggac
    15541 atactatcat cggtatggtg cttgacgaag ctgaagtggt gcacaaagta actatcgtac
    15601 cacgtggtca agcgggtggt tacgcaatga tgttacctaa acaagaccgt ttcttaatga
    15661 ctgaaccaga attactcgat aagatttgtg gtttactcgg tggacgtgtc gctgaagata
    15721 ttatctttaa cgaagtctca acaggtgcgt caaatgactt tgaacgtgct acacaaatcg
    15781 cacgtgaaat ggtgacgaaa tacggtatga gtaaaaaact aggtactgta caattctcac
    15841 atggcggcgg acaagtcttc ttaggtaaag acatgtcggg tgaacctgaa tattcaggtc
    15901 aaatcgcctt tgaaattgac aaagaagtac aacgcatcat taaagaacaa tatgaacgtt
    15961 gtaaacaaat cttgttagac cacgaatccc aattaaaatt aatcgctaaa acgttattaa
    16021 ctgaagaaac attggttgca gaacaaattc aatcattatt ccatgaaggg catttaccag
    16081 aagtgaatta tgatgatgca aaagtcgtta accattctga aaataaagcg tttgacgaag
    16141 ggaaatatgg taagtcttat gatgacattc gtcgagaaca acaagaattg acaggacgcg
    16201 caaaccgtga tcaatcagaa cgacgcaatg aagacgaaac aaccaatgag actgagccaa
    16261 aagacagtga agacacacaa caaaatgaca atggcgatac aacgggttat gaacaagagc
    16321 caaacattga tcgtccaggt aatgatcaac cgccacgtca ataagcgata agcatcaggg
    16381 cttttcttga aagcagaaca cttttaagaa aagccctttt tataattggt gaacactgat
    16441 ggtgaagtgg tgcccctttt caaaagcatg atggtataag tggggataaa atttgataaa
    16501 agcacttgca aaaaagtaag aaagcgaagt catgagggca atcaaagcca aaaatcatta
    16561 tgggcaagtt aaataaaata ccgcatcaat cgcatcccaa attttatggc ctctccactt
    16621 tcgctaattt gaatgtaaaa gttatattta cctctataca tgataaagtt gtaggaagca
    16681 ttttagttga gtcgtacgag acttccgcgt atgataatgc aaagtagtga ccctccaatt
    16741 aaaatagcga cggacataga tgaccattaa tcaataacac agaataaact gcacaaattt
    16801 aaggagtgat atagcaaaat gacacatgac tatttagtaa aagcgttggc ctttaacgga
    16861 gaaattcgtg catatagtgt aaacgcaacg gaaacgattc aagaagcaca aaagcgtcat
    16921 tatacgtggc ccactgcatc tgcagcttta ggtcgaacaa tgacagcaag tttaatgatg
    16981 ggtgctatgt taaaaggtga ccaaaaatta acagtaacgg tagacggcga tggcccaatc
    17041 ggtaaaatta ttgctgatgc agatgcgaaa gggaaagtga gaggttatgt gacgaatcct
    17101 caaacgcact ttccgctcaa tgaacaaggc aaattagatg tgcgtcgtgc agtcggaaca
    17161 acgggcgcaa tcaatgtcgt aaaagatgtg ggcatgcgtg attattatac agggagtagc
    17221 cctatcattt caggtgaact cggtgaagac ttcacatatt attttgcgaa cagtgaacaa
    17281 gtcccttcat cagtgggggt tggtgtactt gttaacccag ataactctat caaagcagca
    17341 ggaggattta tccttcaagt catgccgggt gccaaagatg aaaccatcga tcgtttagaa
    17401 gcagcgatta gcacgatgaa acctgtatcg acattaattg atgaaggttt aacaccagaa
    17461 gaaatgttag aaacgatttt aggtaaagac aatgtgacaa ttttagaaag catgccgact
    17521 gaattcgaat gtaactgtag ccacgataaa tttttaaatg cgatcaaagg tttaggtcaa
    17581 gccgaaattg aagatatgat tgcaaaagat cacggtgcag aagcggaatg tcatttctgt
    17641 cgctcacgtt attcattttc cgaagatgaa ttgaaggcgt tacttgctga aatgccatct
    17701 taaacacatg taacaagctg gaataaaaat tttgatgata tttaatttaa tattttcctt
    17761 aacttgccct catgaacacg cattctttaa ggttgccggt atggattcgc ttttccagag
    17821 acttgtctta actcgccaac acttcatgat cttgttatat tagaagtagc attggcggtt
    17881 tttcaatccc cctacatttt ggcaatttta cattgataac tttagcacat gagggcaagt
    17941 tttgagtttg atgaacaatt tcaaaatcgt tatcgtctca catgaattga tggctaatta
    18001 agtcactttt aaacgacttc atttcttctc ggtcttcaat gatatagaat ggagtatgcg
    18061 agccttttaa acgatatagg cgttaacatc ggtcgatatc ttgataaaaa acagttgcga
    18121 cttagaatgt gcttttgctc gcgtacattt agtggtacac tatagatatc cgatataata
    18181 gctatgtttt aacgagaaaa ttaattgaaa agtgaggttg ttgaggatgg tcagaaaacc
    18241 agtggataat attacagaca ttattggtca aacacctgtt gttaagttac gtcatcaagc
    18301 aggtgaagat gctgcagaca tttatgtgaa attagaatat cagaatccag gcggctctgt
    18361 gaaagaccgt attgccttag cgatgattga acaagcagaa aaagaaggca aaattaagcc
    18421 aggcgataca attgtcgaac ctacttcagg aaatacaggt atcggtttag catttgtatg
    18481 tgcggcaaaa ggttataaag ctgttttcac aatgcctgaa acaatgagta tggaacgtcg
    18541 taacttatta aaagcttacg gtgcagaact cgtattgaca ccgggtgcag aagcgatgaa
    18601 aggtgcaatt aaaaaagcga aagaacttaa agagacacat ggctattttg aaccacaaca
    18661 attcgaaaac ccagctaacc ccaaagtgca tgaattaaca acaggtccag aacttgtaga
    18721 acaatttgaa ggccgtacca tcgacgcctt tttagcaggt gtaggtacgg gtggtacttt
    18781 gtcaggtgct ggtaaagtgt taaaagaaaa atatccagac attcaaatcg ttgccatcga
    18841 acctgaagac tcaccagtat taagtggtgg cgaaccagga cctcataaat tacaaggttt
    18901 aggtgcgggc tttataccag gtacgttaaa cacagaaatt tatgatgaaa ttattaaagt
    18961 cggcaatgaa gtagcgatgg aaacatctcg tcgtgttgct aaagaagaag gtatcttagg
    19021 cggtatttct tcaggtgcgg caatttatgc ggcgattcaa aaagcgaaag aactaggtaa
    19081 aggtaagaca gttgtaacgg tattgccaag taatggtgag cgttaccttt ctacaccact
    19141 ttataatttt gaataagaga caacagtagg gctgtgcaca tacagtcctg cttttttatt
    19201 gcattttagt gatacggcta tagaaaatga tgtgtctcac ttagacatca agtatgctta
    19261 tcattccgct ttgaagacga tggctgacat tgtatgaaag cttcagaaat ttgttataat
    19321 atacctattc taaggtggat gtgaatggtt gaatgaggcg gaaaggaaga ttgtaacatg
    19381 ccacaaacac aaattatggg tattttaaat gtcacaccgg attcgttttc agatggtggg
    19441 cgctttaatg aagttgatcg cgcggttgaa catgggacta agatggttga acaaggcgca
    19501 catatcattg atgtaggagg cgtatccaca cgtccaggtc acgaggaagt cacagaggaa
    19561 gtcacagtgg aggaagaact tgcacgtgtc atcccggtcg ttaaagcttt acaacatttg
    19621 gacgtcacta tttcagtcga tacatttcga agcgaagttg cagaagctgc acttgaagcg
    19681 ggtgctacaa tgattaatga tcagtgggca gggctttatg attcacgcat gtttcaagtg
    19741 gttgcgaaat acgacgcaga agtcatttta atgcataatg gtgatggcga gcggaacgta
    19801 ccggtgatgg acgaaatgct tgtcatgtta ttaaagcaag cgaataaagc ggtgctcgcc
    19861 gggattgatc gtgaacgtat ttggcttgat ccgggtattg gatttgcgac aacgcgtgaa
    19921 gaagaacaag aagtgatgtc acggttagat gaacttgttg caacaggtta taaagttttg
    19981 ttagcgacga gtcgaaagcg tttgattaaa tttttactcg gtggcgacaa tcaagttgat
    20041 gagcgcgatg aagcgacggc agccacaaca gcttacggta ttatgaaagg tgtacatggt
    20101 gttcgtgtac ataatgtttt aatgaatgca cgattggcca aaacaatgga tgcgttgaaa
    20161 ggatatgaag atggaagata aaatattttt aaaaggactt gaattttatg cgtatcatgg
    20221 cgcgctccct gcagaaaatg aaatcggtca aatttttacc gttgatgttg aaatgaaagt
    20281 ggatttaagt gtagcaggta cgtctgatcg cgtggaagat actgtacatt acggtgaagt
    20341 atatgaagat atcaaagcca ttatgcatgg ttctgctgtg caattaattg aacatcttgc
    20401 ggaacgtatt gcattacgta taaattcaca ctataatcgt gtaatggaaa cgaaagttag
    20461 aatcactaaa aaaaatccac ctatacctgg ttattatcaa ggggtcggtg tagaaattgt
    20521 gagggcgaat caccatgatt gatgtgtatt taggtttagg cagtaacatg ggtgaccgag
    20581 aagcacagtt aaaagcagcg attgatttat tagatgctca tgacaagatt aatgttgttg
    20641 cgatttcacc tatttatgaa acgaagccgg tcggatatac agaacaacct gattttttga
    20701 atttatgctt acacattcaa acacaacttt ctgcacaaga cttgttaaag gtcgctttag
    20761 aaactgaggc agagttacat cgtgtacgta aagtgcgatg gggcccacgt acaatggata
    20821 ttgacatttt attgtacggc gatgaaatca ttgaagagga tgatttaacg gtgccgcacc
    20881 cgcgtatgac tgaacgtgct tttgtgatgg taccattaaa tgatattgct gccaatgtta
    20941 ccgaaccgca ttcgggccaa aaaattcaac agatcgtacc tcatgatgat acagtagtaa
    21001 aatataaagc aatattgtga tggattttgg tgattgactt tgaatatatt ggaggaaatt
    21061 tgaaatgtgg aaaattggcg acgttgaaat tgaaaacaga gtcgtgcttg cgcctatggc
    21121 aggtgtgtgt aactcagcat ttcgacttac tgtaaaagag ttcggtgccg ggctagtgtg
    21181 cgcagaaatg gtgagcgata aagcgatttt gtttaacaac ccaaaaacga tgaaaatgtt
    21241 atacatcgat gaaaatgaac gtccattatc gttacaaatt tttggtggtg aaaaagaaac
    21301 attagtcgaa gctgccgaat atgtagataa aaatacaaca gctgacatta ttgatattaa
    21361 tatgggctgt ccagtatcaa aaatcattaa atgtgaagcg ggtgcacgtt ggttattaga
    21421 tccgaacaaa atttatgaaa tggtgtcggc ggtaacagaa cgtgtgagca agcctgtgac
    21481 atgtaaaatg cgtatcggct gggatgagga ccatatcttc gccgttgaaa atgcaaaagc
    21541 tgctgaacgt gctggtgctg cggcgatttc gctacatggt cgcacacgtg ttcaaatgta
    21601 cgaaggtaag gcagattggg atattattcg tcaagtgaaa gaagcagtta acattcctgt
    21661 catcggtaat ggtgacgtta cgagtccaga acttgctgaa aagatgctta aagagacagg
    21721 tgtggatgca gtcatgattg gacgtgaagc attaggcaat ccatggatga tttatcgtac
    21781 ggtgcattat ttagaaacag gcgagttaat tgatgagcct caaatcgacg aaaaaattga
    21841 gattgcttta ttacacttga atcgtctcgt agatttaaaa ggtgaaaaag tgggcgttat
    21901 ggaaatgcgc aaacacgcgt catggtacct taaaggtgtc agaggcaatg gtaaagcgcg
    21961 taaagcatta aaccaggcag aaaccttagc cgaaatgact gagattttaa cagaattccg
    22021 tgatgaacaa atggaaaaac aaaaaataga ggcataagaa gcgaaaagga gaggtaagca
    22081 tgacagaaga attgaatgac caaatgcagg tccgtcgaca aaaattacaa gaattaagag
    22141 acttagggat tgatccattc ggtgagaagt ttgagcgtac tggaactgcg gaaacgttaa
    22201 aagctcaatg ggatcaatac gcaaaagaag aacttgctga aaaagaaacg gaaagtcata
    22261 cggtaattgc aggtcgtatt atgacaaaac gtggtaaagg taaagcagga tttgcgcacg
    22321 ttcaagattt atcgggtcaa attcaaattt atgtacgtaa agaccaagtg ggtgacgcac
    22381 aatttggtat ttggaatact gcagacttag gtgatattgt cggcgttgaa ggtattatgt
    22441 ttaaaacaaa tactggagaa ttatcagtaa aagcgaagtc attcaaactt ttatctaaag
    22501 cgttacgtcc attaccggac aaacatcacg gtttacaaga tattgaacaa cgctaccgtc
    22561 aacgttatct tgacttaatt accaacgaag aaagcacgca aacatttatt aatcgtagcc
    22621 gtattcttca agaaatgcgt aattacctta atgaaaaagg gtttttagaa gtggaaacac
    22681 caatgatgca tcaaatcgca gggggtgctg cagcgaagcc attcgtgaca caccacaacg
    22741 cattggatgc aacactttac atgcgtattg ccatcgaact acaccttaaa cgtttaatcg
    22801 taggtggttt ggagaaagta tatgaaatcg gacgtgtatt ccgtaacgaa ggtgtttcta
    22861 cacgtcataa cccagaattt acgatgattg aattgtatga agcgtatgca gattacaaag
    22921 atattatgtc attaactgaa gaattagttg cacacatcgc tcgtcgcgta ttaggtacaa
    22981 cttcagttca gtacggtgat gaaacaatta atttagaacc acaatggcgt agattacaca
    23041 tggtcgatgc cgttaaagaa gcgacaggtg tagactttta tgaagtgaaa tcagacaaag
    23101 aagcacacga attagcgaaa gcacatggta ttgaagtaga tgataatatg aagtatggtc
    23161 acattctaaa tgaatttttc gaacaaaaag tagaagaaac tttaattcaa ccgacattca
    23221 tttatggtca tccaattgaa atctctcctt tagctaagaa gaaccctgaa gatccacgtt
    23281 tcactgatcg ctttgagttg tttattgtag gtcgcgaaca tgcgaatgcg ttcacagaat
    23341 taaatgaccc aatcgatcaa cgtcaacgct ttgaagcaca attagtagaa aaagagcaag
    23401 gtaacgacga agcacatgaa atggatgagg atttcattga ggcattagaa tacggtatgc
    23461 cgccaacagg tggattaggt atcggtattg accgcctcgt gatgttatta acgaattctc
    23521 catctattcg tgacgtgtta ttattcccat atatgcgcca aaaataagat gtattattaa
    23581 tcgcttgtac attgtctatt cagtgtacag gcgtttttta gctttagtaa aggagaaaag
    23641 gatgaacacg agggacactt catattgcga tgtgtagagg agagaatact atgatgcatg
    23701 gtgaatggat atggcgagac taggttggtt tcacatgtgg tgggcacaga aatggtcatg
    23761 caaatcggtt tgaatttatt ttaaaaaaag gtgttaaaaa gtgttgactt tgaaaagata
    23821 attgagtatt atataaaagt cgtcaaattg aacggcaaaa caaatttaaa atgtttgtaa
    23881 aaaacttaaa caaagtgtaa aattaactat tgaaaagtat ttgcaaaaca tgtattataa
    23941 aaaggtagcc gataagctac ttaataaaat aattattgtc tggtgacaat ggcaaagagg
    24001 tcacacctgt tcccatgccg aacacagaag ttaagctctt tagcgccgat ggtagtcgga
    24061 cttacgttcc gcgagagtag gacgttgcca ggcattacat atggagaatt agctcagctg
    24121 ggagagcatc tgccttacaa gcagagggtc ggcggttcga tcccgtcatt ctccaccatt
    24181 gccggcctag ctcaattggt agagcaactg acttgtaatc agtaggttgg gggttcaagt
    24241 cctctggccg gcaccatttt atgagccatt agctcagttg gtagagcatc tgacttttaa
    24301 tcagagggtc agaggttcga atcctctatg gctcaccatt cgaatactat tgagcagaag
    24361 tagttcagcg gtagaatacg accttgccaa ggtcggggtc gcgggttcga atcccgtctt
    24421 ctgctccatt atttttgccg gggtggcgga actggcagac gcacaggact taaaatcctg
    24481 cggtgagaga tcaccgtacc ggttcgattc cggtcctcgg caccatcttt aattatgcgc
    24541 ccgtagctca attggataga gcgtttgact acggatcaaa aggttatggg ttcgactcct
    24601 atcgggcgcg ccatcttaat aacgggaagt agctcagctt ggtagagcac ttggtttggg
    24661 accaaggggt cgcaggttca aatcctgtct tcccgacttc tgtaaaataa catgggggct
    24721 tagctcagct gggagagcgc ctgctttgca cgcaggaggt cagcggttcg atcccgctag
    24781 tctccaccat tatatatttg aaatgaacat tgaaaactga atgacaatat gtcaacgtta
    24841 attccaataa tttgagtact tcaaaagtac tttc
//
LOCUS       DANHPA010000028        23570 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.028, whole genome shotgun sequence.
ACCESSION   DANHPA010000028 DANHPA010000000
VERSION     DANHPA010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 23570)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23570)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23570
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.028"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(363..1169)
                     /locus_tag="PTC28_000919"
     CDS             complement(363..1169)
                     /locus_tag="PTC28_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylamine N-acetyltransferase"
                     /protein_id="HDK5716219.1"
                     /translation="MNIQKVDQKIEIDAQKLSVNRVEALNEYMYQFMQHVPFENISVQ
                     NGVEISIHLNDLYEKIVEEGRGGFCYELNTFFAAYIEAKGYETQYLSATVHTPDGGRS
                     IAGAHLSLGVMLDGEMYIADVGFGGASPVKAMRVTDDGSETVEDKSGVYRALRVDDDI
                     KIQKYEDDHWETSFVASVEPKSLSDFDDKLEYNQHHPDSPFVNHLIVTKPTSTGRVTM
                     SQSNLTVTDKKGKHKAPVTSNNYRHFLKKYFDMDIVIPRLESEEKASTEK"
     gene            complement(1366..2691)
                     /locus_tag="PTC28_000920"
     CDS             complement(1366..2691)
                     /locus_tag="PTC28_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-containing oxidoreductase"
                     /protein_id="HDK5716220.1"
                     /translation="MNQYDLIVVGFGKAGKTLAKFAAQQGKSVAVIEKSAEMYGGTCI
                     NIGCIPSKVLVHDGIEAASFNDAMQRKRDVVNALNSKNYHNLADEETVDVINMTASFK
                     SAHAIDLLNAQGEAVQTIEGKNIVINTGAKSVIPNIKGIDTSQRVYDSKAIMDLTQQP
                     KRLVIVGGGYIALEFASIFANFGTTVTVLERSDQILKREDAVIAQQVTEDLTQKGIQF
                     IYNAETEAIEDEADVTKVVTNQGTFEADAVLVATGRKPNTEGLNLEAAGVQLGQRGEI
                     IVNDKLQTSVDHIYAVGDVHGGLQFTYISLDDFRIVKSQLFGDGKRTLAQRGVVPYTM
                     FIDPPMARVGMTATEAREKGYDILENQVAVNTMPRHKINNDTRGLFKAVVDAKSGQVL
                     GATLYGQQSEELINIVKLAIDQQLPYAVLRDNIYTHPTMAESFNDLFNV"
     gene            complement(2692..3114)
                     /locus_tag="PTC28_000921"
     CDS             complement(2692..3114)
                     /locus_tag="PTC28_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HDK5716221.1"
                     /translation="MNLEFNIAVHVLTFLNQHKGEVFNSQALAENVCVNPVQLRRVMS
                     KLQQKGDVKVVRGQKGGYLATEDGLAIKLEPLFRLFNRPENHGRLFTGNPSMHCKISQ
                     KIEQVMYGHYLIEQEIIANYYQGQTIGDILNQIREVEA"
     gene            complement(3201..3863)
                     /locus_tag="PTC28_000922"
     CDS             complement(3201..3863)
                     /locus_tag="PTC28_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5716222.1"
                     /translation="MLKFQNVTKSFKDGQQVIEAVKPTTLEFSPGELIAIVGPSGSGK
                     STFLTMAGALQKPTSGDIIIGTQKITDLSQKALARVRMQQIGFILQTSNLVPFLTVKQ
                     QFQLLKKRKKDVMAQQDFDALIQQLGLESVMNQLPSEISGGQKQRVAIAKAIYTNPDI
                     ILADEPTASLDTENAMSVMEILKNESKRRNKMCMIVTHDERLTAYCDKVFEMKDGVLT
                     EK"
     gene            complement(3876..4925)
                     /locus_tag="PTC28_000923"
     CDS             complement(3876..4925)
                     /locus_tag="PTC28_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5716223.1"
                     /translation="MFLAWNEIKRNKLKFSLIIGVLILISYLLFLLSGLAKGLINMNT
                     EGINRWEADAIVLNKDANQTVQQSSFDKTLVNGKFDKQATLKQAAVIVSNGKIEENAL
                     LYGTQKDAFIVPQLTEGRTFTADNEVIADGTLKEKGFKLGDTLSLSQSDETLKIVGFT
                     ESAKYNASPVLFGNDQTIEKINPLLTGDKTNAVVVKDSHWQHQKLDSTLEAIDINTFI
                     ENLPGYQAQNLTLNFMISFLFIISATVIGVFLYVITLQKTQLFGVLKAQGFTNGDLVK
                     VVLSQTFVLALIGTVIGLILTLVTGTFLPSAVPIKFEMLTLIIFGIVLILVSLLGSLF
                     SIMTIRKIDPLKAIG"
     gene            complement(5057..6391)
                     /locus_tag="PTC28_000924"
     CDS             complement(5057..6391)
                     /locus_tag="PTC28_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transporter B"
                     /protein_id="HDK5716224.1"
                     /translation="MLTVTYHLVSGRVSDIPNEPHQFRVCGWKQLTPYEQQAFKRFVI
                     QQRLAVSLNQAVHCTTEETRKHVAQLQSFWRVHHQQRPRPLHTLLGWLCVFLMFAVPV
                     YVAYHFSDWLQSEFVAPWIDSVAQHPLFRPSLIHAFLFGDYGVLSLGTYSLVWALPVV
                     VLLSLSTALIEQSHLKQYIIWSIAPTMGKVGLDATDIIPLLEGFGCNAAAIVQAGHQC
                     HLCTRTRCMSLISFGTSCSYQIGATLSIFNVAHQTWLFIPYLLLVLVGGLLHNRLWYR
                     TEQQFMPIQATLDESLTWPSLGRVLSQMGESVKMFLFQALPIFITICLIASALALTPI
                     MEMISKLFIPLLSLLHIPHELSPGILFSMIRKDGMLLFNIGDGQFIHNLSSWQVLLLV
                     FFSSTFTACSVTMTMVMRQLGWREGGKMIARQMLTSLACVILLGSITWILLL"
     gene            complement(6385..7494)
                     /locus_tag="PTC28_000925"
     CDS             complement(6385..7494)
                     /locus_tag="PTC28_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HDK5716225.1"
                     /translation="MKQHHRVIIIGAGAAGVGMAITMKTLHVEDVCVIEAGAIGQSFK
                     NWPKSTRTITPSFTSNGFGMPDMNAIAKDTSPAFTFNEEHLSGDTFAEYLTVVAEHYD
                     IDIRTETKVEDVQFVDGVYELNTSQGTYTADYIYVATGDFAFPNQPFDHGIHYSEVDD
                     FKALPGHTFTVIGGNESAFDAAIHLAKGGAQVSIYTSSTGFDADEADPSIRLSPYTHQ
                     RLREAVQQGAEIEMNVHYRAESIIFRKGQYEIHFDNGAIVYSTTEPIIATGFDVTKNP
                     LIQQLFTVRNGEVQLTDLDESTRYPNVFLIGATVRHADAILCYIYKFRARFAVLARTM
                     MQREGLSVDQAVIDSYRDNHMYLDDYSCCEVNCSC"
     gene            complement(7736..9331)
                     /locus_tag="PTC28_000926"
     CDS             complement(7736..9331)
                     /locus_tag="PTC28_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HDK5716226.1"
                     /translation="MDKQTIRQQIEAGNISVGIELGSTRIKTVAIDSTTRTIATGHYE
                     WEQQLTDGYWSYDLDEVWQGIRESFRLMTREIKATYEVKLTHMASLGISGMMHGYLVF
                     DAQGQLLVPFRTWRNNTAHEAGKQLREAFQFNIPERWSIAHYYQSALKEESHVKDVAY
                     MTTLSGYVHWQLTGEKVLGIGDASGMFPIDPKTATYRKDLCEQFDTLMATNGYDQDIQ
                     RILPTVHVAGEQVGTLTADGARLLDPTGTLTSGCPMCAPEGDAGTGMVATNSIAPKTG
                     NVSAGTSIFAMIVLEQPLKAVYPEVDIVTTPAGDEVAMIHANNGSSDLNHWVHLFEEV
                     FQLMDMSYDKTTLWTRLFESALDGDDDLGKLLSYGYISGEYMTDVPRGFPLFIRQQDS
                     RFNIQNFMKNHIFTMLSTLKIGVDRLKTREQLQIERMTGHGGVFATKQVVQRYLAAAL
                     ESPVTVMENANEGGAWGMAMLARYMLENNGTLAAFLEHVGFRDVETETMAPQARDIES
                     FNTYVQRFEVGLAIERLLNDTLD"
     gene            complement(9547..10704)
                     /locus_tag="PTC28_000927"
     CDS             complement(9547..10704)
                     /locus_tag="PTC28_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDK5716227.1"
                     /translation="MELLNNHIKDIEVPGTRQFANKVDQYPNCLDLTLGQSDFPVASY
                     VQDAMIQAIQEGRLKYTHNKGLLELRTAISEYTAERFGVTYDPETEIVVTNGASEGID
                     DILRTILNPGEEVILPGPTYLGYEPIVKLQGAEVKWIDTSHTGFVPTADAIKAAITPQ
                     TKAIMFNYPTNPTGTTLSYENIAEIVAVLKETNIFIITDEIYSENVFEGRHRSFMEFP
                     EIRKQLFVVNGLSKSHAMTGARVGYVLSTPELIEEVTTVHLYNSICVATPSQYGAIRA
                     LKEGAADIEKMNAAYRERRDYIYQRLTDMGLSVTLPQGTFYIFPNVSAYDQDSFRFCN
                     QLLEREQLAIVPGKSFSDFAEGYVRLSFACDMPTIEEACNRLERFLSYYQA"
     gene            complement(10767..12143)
                     /locus_tag="PTC28_000928"
     CDS             complement(10767..12143)
                     /locus_tag="PTC28_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HDK5716228.1"
                     /translation="MKTIDFIVFIIYFAALISVGIIGVLKAKSSEKYMVADRNLGLWM
                     LFGCLTAVFLGGSSTIGTSQLGYEIGLSGFWFVFSLGVGITIFGLFLLDRIMDLQVIT
                     ISELLYRLFGHRVRVMGAVVTAMYTLMICVTQVIAMGAVVSQIFHWPMMTAILVGGSI
                     VFVYTILGGMWTLSITDVIQFLVMTIGVFCIMLPMSLHSVGGLTTLIEQLPASHLSFF
                     NIGVGEIVNYFVTYTLGVMVGQDIWQRFFTGKTKRVSKASGVLVGLYSALYSIVMVIV
                     GMCAYVLFPNIQNTQNVFAHMAFEILPNGLLGIVFAALIAAIMSTASGTLLASATIIS
                     NDLLKPYVFKNMEDHQFLGLTRLTTCILAVIAIVISIWVKEVLVAIDIAYAILTGGIF
                     MPVVLGLFMKRITPQAAFYAIIASVIVIFIGIAITGPQSTATIFYAILVNAIILIIMS
                     QFQRKKEA"
     gene            complement(13115..13561)
                     /locus_tag="PTC28_000929"
     CDS             complement(13115..13561)
                     /locus_tag="PTC28_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HDK5716229.1"
                     /translation="MAQGREQVVEDLNLQLSNFTVLWTKIHNYHWYVKGHNFFALHEK
                     FEELYNKVAVYVDEIAERALALEGNPVGTMKEVLEVSSIEEAEKNISAEQMVAQLATD
                     FETVVKELKQAQGNAEEAGDDRSADMFIEIATELEHNIWMLKAYIG"
     gene            complement(13683..14006)
                     /locus_tag="PTC28_000930"
     CDS             complement(13683..14006)
                     /locus_tag="PTC28_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716230.1"
                     /translation="MILDRINPDDLFPTEHIETSVLGIMPYQMKDMTKRFEAAYVATN
                     ERLILNVDMDGQFYYRNIQFSEIKGIKTIDNALEITFDYGVFTLEESDADKVKAMSEY
                     LHSKI"
     gene            complement(14222..15712)
                     /locus_tag="PTC28_000931"
     CDS             complement(14222..15712)
                     /locus_tag="PTC28_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HDK5716231.1"
                     /translation="MNRDESKLTGLFGHPVSDRENSMTAGPRGPLLMQDWYFLEQMAH
                     FDREVIPERRMHAKGSGAFGTFTVTNDITKYTNAKIFSEVGKKTEMFARFSTVAGERG
                     AADAERDIRGFALKFYTEDGNWDLVGNNTPVFFFRDPKLFASLNHAVKRDPRTNMRSA
                     QNNWDFWTSLPEALHQVTILMTDRGIPKGYRHMHGFGSHTYGMINANNERVWVKFHFR
                     TQQGIENLQPDEAAAIIANDRESSQRDLYNAIEEGDFPKWKMYIQVMTEEQAKNHKDN
                     PFDLTKVWYKGEYPLIEVGEFELNRNPENYFMDVEQAAFAPTNIIPGLDFSPDKMLQG
                     RLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENICPFSRDGAMRFLDGNQGGQTHYYPN
                     SYGAHQSQPEYKRPPLEIEGGAYEYDFREDDDNYFEQPGKLFRLQSPEQQQRIFQNTA
                     NEMQGTTDEVKRRHIKNCYQADVNYGTGVAKALGMEDQLASIIAEI"
     gene            complement(15960..16490)
                     /locus_tag="PTC28_000932"
     CDS             complement(15960..16490)
                     /locus_tag="PTC28_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative metal-dependent hydrolase"
                     /protein_id="HDK5716232.1"
                     /translation="MDVRYPIGRLEVPATVTRRHIDSWLEEIAQYIQNLRKTVANLSQ
                     EDLRTTYREGSFTVQQLVHHIADSQMNMFQRLKLALTDTHPKVSNFAQDEWVKLADSD
                     LPIEVSIQMLDAINQRVVAIGQHLTEKELARDFVLEGSGATTVGETVAKLSWHARHHL
                     AHIQIALGELEVNDAL"
     gene            16932..17366
                     /locus_tag="PTC28_000933"
     CDS             16932..17366
                     /locus_tag="PTC28_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HDK5716233.1"
                     /translation="MAFDMRPFNHSFFNMEPSDFFKDFGRHMLDESFATPHIRTDIKE
                     LDDAYVIEAELPGMDKENIQLKFENNVLTIAAQNTVKNHKEDEEGHVIRQERHFSRMQ
                     RQFTFNNVDESNIKASYQNGMLNVTLNKRTPGRSSNSDIPID"
     gene            17741..18049
                     /gene="spn"
                     /locus_tag="PTC28_000934"
     CDS             17741..18049
                     /gene="spn"
                     /locus_tag="PTC28_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPIN family peroxidase inhibitor"
                     /protein_id="HDK5716234.1"
                     /translation="MNKTLIAGITVAALSTGIFATATGHEAHAQVTAQNGIVLHDDSK
                     LLAHELDYVDVLINPNTDPQTKAQLQDYFAKQGLNSVSDIVQKAKQDGLDTSKYNHLI
                     "
     gene            18312..19739
                     /locus_tag="PTC28_000935"
     CDS             18312..19739
                     /locus_tag="PTC28_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HDK5716235.1"
                     /translation="MDRDIKSTRSEWRHIIYNEVKNLLNKEMKDLPVALKPTDSMIAK
                     YQRMKIPKEGKGIEAVMDLLHTEVLNYNYRSNHPRTFSFVPGPASQLSWLTDFFTSAH
                     NIHASNFANAPLPIAIEHRLIRYLSEEIGFDSALSGGVFVSGGSMATLTAITAGRDAM
                     IPLSQMSEATVYLTAQAHFSVAKAFHIAGFAQTQLRYIPTDDFYTMDVNALEQQIELD
                     ITNGYRPIMIVATAGTTNTGAIDNLTHITRIARQHQMWVHADGAFGLSHIFTEEGKKL
                     LKDIDKVDSVTWDAHKLLFQTYSCAMVIVKNKNHLLSTYGVTAEYLDDITSTNEHIDP
                     EKLGIELTRPPRGLKLWVTLQVLGENEIKRRIEHGQEMARYVEQQVQQMKNWKIVTTS
                     QLSVINIRYEDPTKTPEENDQVMQFAASRIIQSGYAATYTTELSHRRVIRFCTIHPET
                     TRADIDGTLQRLNNYVQEASSQPQT"
     gene            complement(19824..20240)
                     /locus_tag="PTC28_000936"
     CDS             complement(19824..20240)
                     /locus_tag="PTC28_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HDK5716236.1"
                     /translation="MDDIDLKILKLLKTNARMKVKTISSIVMLSEPSVKNRISKMIES
                     KVIHGFNVDVNYEKLGYMIGFFMKVTEIKIAISEFEKRLQQFSDFREYYAVTGTEKYI
                     IHGYTKDIASLNALILKMERIAEFNTSIVLHQVKKD"
     gene            complement(20502..21194)
                     /locus_tag="PTC28_000937"
     CDS             complement(20502..21194)
                     /locus_tag="PTC28_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HDK5716237.1"
                     /translation="MTTLPTAGKPIYYRDFIIVPVFILLQYTFPLLAEEVFPNLLERL
                     FDYTLQPSGYNILFNVMMCLAQVIVIAIFMLLHRQHVVARIKTQLIGMRQHLWRIIIV
                     YLLLVSFIFIYQRVIPPMTIQDDLITIPLSFVTIGILTPIVEELLFRHLIIGELGKKW
                     GFRWMAVVSIIAFGAAHFLHFTSIWTFVPYMVGGIAMTYIYIASGRNILVAIALHIMI
                     NSVSQILSMLGI"
     gene            21456..22082
                     /locus_tag="PTC28_000938"
     CDS             21456..22082
                     /locus_tag="PTC28_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent NADH-azoreductase"
                     /protein_id="HDK5716238.1"
                     /translation="MAKLLYITAHPLDELLSASMAAGKTFKETYEKAHPEDEVVHIDL
                     FKEDIPQIDADVFTGWGKLQNGETLTEAEEKKVNRLGEIVDEFINADKYVFVSPMWNL
                     SFPPVLKAYIDAVAVAGKTFKYTPEGPVGLLTDKKALHIQARGGFYSEGPGVDLEHGD
                     RYIKTMMAFFGVPSYETIIVEGHHAAPERSEEIKAHSLRQAEELGHNF"
     gene            22466..22990
                     /locus_tag="PTC28_000939"
     CDS             22466..22990
                     /locus_tag="PTC28_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDK5716239.1"
                     /translation="MIRWLQQSTIASILLLIFRIYLGYGWFMAGLGKITNGKGFDAGG
                     FLQNAVLHPVIGVDGSTQYPLFTSFLEHIVLPMTPFINILIPISEIVVGLLLIFGLFT
                     PIGAFIGLVLNFLFLFAGTVSINPLYILIGFFIFVAGYNSGHFGVDRFLKSLLSKKFF
                     SIFNYHPETKDTSV"
BASE COUNT         7175 a         4990 c         3890 g         7515 t
ORIGIN      
        1 gagagactct agtttctcac ttctatgctt tggcttccta acactgaccg ctttttccta
       61 tttcaagtaa gccagacatt ttattatata agacacttga ttcaatgtgt tcagaaaaag
      121 ccttcaatat cttttcatac cgcctcaaaa tacagagcaa caatggcttg atagacgtac
      181 ctttttattc tgtaaatgcc tgtacaacct ccctacgcca cctcaatccg tttggtaact
      241 gttgtcatat tgatagattc gatttgatat ttttaatgaa tcatttccat taatgtgtct
      301 aatattttac ttcgatttag tcatgcatcc caccgttttt tactatctcg atttaccatc
      361 ttttactttt ccgttgatgc cttttcttca ctttctaaac gtggaataac aatatccata
      421 tcgaaatact tttttaaaaa gtgtctataa ttgttagatg tgacaggtgc tttgtgtttc
      481 ccttttttgt ctgtcactgt taaattactt tgagacatcg tcacacgtcc tgtcgaagta
      541 ggttttgtca caattaagtg attcacaaat ggagaatctg gatgatgttg attgtattca
      601 agtttatcat caaagtcaga taatgatttg ggctcaacac ttgctacaaa tgatgtttcc
      661 caatgatcat cttcatattt ttgtatttta atgtcatcat ccactctcaa tgctcgatat
      721 acgccacttt tatcttctac ggtctcactt ccatcatcag tgacacgcat cgctttgact
      781 ggagatgccc caccaaaacc gacatctgca atatacatct ctccatccaa catcacacca
      841 agcgatagat gtgcacccgc aatactgcga cctccgtctg gtgtatgcac agttgcagaa
      901 aggtattgcg tttcataacc tttagcctct atataagcag caaaaaacgt attcaattca
      961 taacaaaagc cgccacgacc ttcttcaaca atcttttcat atagatcatt taaatgaatt
     1021 gaaatttcca caccattttg aacagatata ttctcaaatg ggacatgctg cataaattga
     1081 tacatatatt catttaacgc ttcaacacga ttgaccgaca gcttttgcgc atctatctct
     1141 attttttgat ctactttttg tatattcatc atcatcctcc tacttgttct tatgtgcctg
     1201 ttatttatat tcccttttga tgaacatgca ttcatgcttt gaccacctca acatcaacgc
     1261 attgattcaa gaaaaaatgt cacgttaggc acaacgcatc catcattatt cacaccgcac
     1321 cttaaaaagc acgcatcgat aaccgacacg tgccacaaca catcactata cattaaacaa
     1381 atcgttgaat gattcagcca tcgtcggatg tgtatagatg ttatctctca acactgcata
     1441 cggcaactgt tgatcaatcg ctaatttcac aatattgata agctcctcag actgctgacc
     1501 atacaatgta gcgcctaaca cttgacctga cttcgcatcg accaccgctt tgaacagacc
     1561 tctcgtgtca ttgtttattt tatgacgtgg cattgtattc acagcaactt gattttcaag
     1621 aatatcatac cctttctcac gtgcttctgt cgcagtcata ccgacacgtg ccatcggtgg
     1681 gtcgataaac attgtatacg gcaccacgcc tcgttgtgcg agtgtacgtt taccatcgcc
     1741 aaacaattgt gatttcacaa ttctaaagtc atccaatgaa atatacgtaa attgcaagcc
     1801 accatgcaca tcgccaactg catagatatg gtcaacagat gtttgtaatt tgtcattcac
     1861 aataatttct ccacgttgac ctagttgaac acctgctgct tctaagttta agccttctgt
     1921 attcggtttg cgccctgttg ccacaagtac agcatccgct tcaaatgtgc cttggtttgt
     1981 cacaacttta gtcacatcag cttcatcttc aatcgcttca gtttcagcat tataaatgaa
     2041 ttgaatgcct ttttgtgtta aatcttctgt cacttgttgt gcaatcactg catcttctct
     2101 tttcaagatt tgatcagatc gctctaagac agtcactgtt gtaccgaaat tcgcaaaaat
     2161 tgacgcaaat tcaagtgcaa tatagcctcc accgacaatc actagacgtt tcggttgctg
     2221 cgttaagtcc ataattgctt ttgagtcata cacacgttgc gatgtatcga tacctttaat
     2281 atttggaatg actgacttcg ctcctgtgtt aatgacaata tttttccctt caatcgtttg
     2341 taccgcttca ccttgtgcat tcaataagtc gattgcatgt gcggacttga atgatgctgt
     2401 catatttatc acatctactg tctcttcatc tgcaagattg tgatagtttt tactgtttaa
     2461 tgcattgact acatcgcgtt tacgttgcat cgcgtcgtta aatgatgccg cttcgattcc
     2521 gtcatgaact aatacttttg atggaataca gccgatgtta atgcatgtcc ctccatacat
     2581 ttcagcagac ttttcaatga ctgcgacgct cttaccttgt tgtgctgcaa attttgccaa
     2641 tgtcttccct gccttaccaa atccgacaac aattaaatca tattgattca tttatgcttc
     2701 cacctctcta atttggttca aaatatcacc tatcgtttga ccttggtaat aatttgcaat
     2761 gatttcttgt tcaattaaat agtggccata catgacttgt tcgatttttt gtgagatttt
     2821 acagtgcatg gaagggtttc ctgtaaataa gcgtccatgg ttctcagggc gattgaataa
     2881 acgaaaaagt ggttctaact taatcgccaa tccatcttca gtagcaaggt atcccccttt
     2941 ttgaccacgc accactttaa catcaccttt ttgttgcaac tttgacatca cgcgtcttaa
     3001 ttgcacagga ttgacacaga cattttcagc gagtgcttgg ctattaaaca cttccccttt
     3061 atgttgattt aaaaatgtga gtacgtgcac ggcaatatta aattcaagat tcatcattgc
     3121 acctctttaa tgtaattctt atagttacat taaaacacat cttcattaaa ataaaaaccc
     3181 taatccttta aatattgttt ctacttttct gtaagcacac catctttcat ttcaaatacc
     3241 ttgtcacagt atgccgttag ccgctcgtca tgtgtcacaa tcatacacat tttgttgcgt
     3301 cgtttagatt cattttttaa aatctccatc accgacatcg cattttcagt atcaagagaa
     3361 gctgtgggtt catcagctaa aatgatatct ggattcgtat agatcgcctt ggcaatagcg
     3421 acacgttgtt tttgtccacc cgatatttca cttggtaact gattcatgac actttctaaa
     3481 cctaactgtt ggataagtgc atcaaaatct tgttgtgcca tcacgtcttt ttttcgcttt
     3541 ttcaagagtt gaaattgctg tttgactgtt aaaaatggta ctaaatttga cgtttgtaat
     3601 ataaagccaa tttgttgcat gcggacacgt gccaatgctt tttggcttaa atctgttatt
     3661 ttttgtgtgc cgatgataat atctccggat gtcggctttt gcaatgcacc tgccattgtt
     3721 aaaaatgtac ttttccctga accagatggc cctacaatcg ctataagttc tcctggacta
     3781 aactctagtg ttgtcggttt taccgcttca ataacctgtt ggccatcttt aaatgacttt
     3841 gtgacatttt gaaatttcaa catacctttt acctcctaac cgattgcttt cagtggatca
     3901 attttgcgta tcgtcattat tgaaaataaa ctgcccaata gcgacactaa aatgagcaca
     3961 ataccaaaaa ttataagcgt gagcatctca aatttaatcg gtacggcaga aggtaaaaat
     4021 gtacctgtca cgagggttaa tattaagcca ataactgtcc caatcagcgc taatacaaat
     4081 gtttgagata atacgacttt cactaaatct ccatttgtaa atccttgtgc tttcaatacg
     4141 ccaaacaatt gcgtcttttg taacgtaatg acatataaaa aaacaccaat gactgtagcc
     4201 gagataataa ataaaaaact aatcataaag tttaaagtta aattttgcgc ttgataacct
     4261 ggcaggtttt cgataaatgt attgatatct attgcttcaa gtgtcgagtc tagtttttga
     4321 tgttgccaat gactatcttt tacaacgacg gcattcgttt tatccccagt taaaagagga
     4381 tttatttttt caatcgtttg atcattccca aagagaacag gagaggcatt gtattttgct
     4441 gattcggtaa atcctacaat tttgagtgtt tcatctgatt gagaaagtga taacgtgtcc
     4501 ccgagtttga atcctttttc tttcaatgta ccgtcagcaa tgacttcatt atctgcagta
     4561 aacgtacgtc cttctgtcag ttgagggaca ataaacgcat ctttttgggt tccatatagc
     4621 aatgcatttt cttcaatttt accgttagag acaatgactg ctgcttgttt caatgtggct
     4681 tgtttatcaa attttccatt cacaagcgtt ttgtcaaagc ttgattgctg aactgtttgg
     4741 ttggcatcct tgtttaacac aatcgcatct gcctcccaac gattaatacc ttccgtattc
     4801 atattgataa gtcctttcgc caatccagac agtaaaaata atagataact gatgaggatg
     4861 agaacaccaa taatgagact gaatttaagt ttgttccgtt tgatttcatt ccatgctaaa
     4921 aacataggca cctcctgaga tgatataggt tatatcttcc ctaaatccat atattttaag
     4981 cctcatttca ataaaaaaga gctgagacga tattaacatc tcaactctct tcatatatct
     5041 tccataaaat tagtgtctaa agtaatagaa tccacgttat actacctaac aaaatgacgc
     5101 atgcaagtga tgtcagcatt tgacgtgcaa tcattttacc cccttcacgc caccctaatt
     5161 gtcgcatgac catcgtcatt gtaacagagc aagcggtaaa tgttgagctg aaaaagacga
     5221 ggagtaacac ttgccatgat gataggttat ggataaactg tccatctccg atattaaata
     5281 acaacatgcc atctttacga atcatcgaga agagtatacc cggtgatagt tcatgtggaa
     5341 tgtgtaataa gctaaggagt ggaataaaca attttgaaat catttccatt attggcgtca
     5401 atgccaaggc actagcaatc aaacaaatgg taataaatat tggtaatgct tgaaatagaa
     5461 acatcttaac actttctccc atttgggata acacacgccc taaagatggc catgttaatg
     5521 actcatccaa cgtcgcctgt ataggcataa actgttgctc tgtgcgatac cataatcggt
     5581 tatgcaataa tcctcctact aacacaagta ataaatacgg gataaagagc catgtttgat
     5641 gtgcgacgtt aaatattgaa agtgtcgcac caatttggta actacatgat gtcccaaaac
     5701 tgataagact catacaacgc gtacgggtac ataaatgaca ttgatgacca gcttgtacaa
     5761 ttgccgcagc attgcatcca aaaccttcta acaatggaat aatatctgtt gcatcgagtc
     5821 ccaccttccc cattgtgggc gcaatcgacc aaatgatata ttgtttcaag tgcgattgct
     5881 caattaatgc agtagacaaa ctcagtaaca caacaaccgg caatgcccaa acaagtgaat
     5941 acgtgcccaa tgataaaaca ccgtaatcac caaataaaaa ggcgtggatg agtgatgggc
     6001 gaaaaagcgg atgttgtgca actgaatcaa tccaaggtgc aacaaactcg ctttgtaacc
     6061 aatcagaaaa atgataggca acataaacag ggacagcgaa cattaaaaag acgcacaacc
     6121 accctaataa cgtatgtaaa gggcgtgggc gttgctgatg atgaacacgc caaaatgatt
     6181 gcaattgtgc aacatgtttt cgtgtttctt ccgtcgtaca atggacagct tgattgagcg
     6241 acaccgctaa ccgttgttga atcacgaaac gcttaaacgc ttgctgttca tacggggtca
     6301 gttgtttcca tccacatact cgaaactgat gtggttcgtt aggaatatca gatacacgac
     6361 cgctgaccaa atgatatgtg actgttagca tgaacagttc acttcacaac aactataatc
     6421 atctaaatac atgtgattat cacggtaact atcaatcact gcttgatcta cagagaggcc
     6481 ttcacgctgc atcatcgtac gtgccaatac tgcaaatcgc gctctaaact tatagatata
     6541 acaaagtatc gcatcagcat gtcttacggt cgcgcctatt agaaaaacat tgggataacg
     6601 tgtcgattca tctaaatctg ttaattgaac ttctccattt cttactgtaa agagttgttg
     6661 aataagcggg tttttcgtta catcaaagcc tgtcgcgata atcggctccg tcgtactgta
     6721 tacgatggca ccattatcaa aatggatttc atactggccc ttgcgaaata taatagactc
     6781 tgcacgatag tgaacgttca tttcaatttc tgcaccttgt tgtaccgctt ctcttagacg
     6841 ttggtgtgta tatggagaca aacgtatact tggatcagct tcatctgcat caaagcctgt
     6901 tgaactcgta taaatggaga cttgtgcacc tcctttagcg agatggatag cggcatcgaa
     6961 tgcactttca tttccaccta tgactgtaaa cgtatgacca ggtaatgctt taaaatcatc
     7021 tacctcacta taatgaatcc catgatcgaa tggttgattt ggaaaggcaa agtcacctgt
     7081 cgcaacgtaa atataatctg cggtataagt cccttgagat gtatttaatt cataaacgcc
     7141 atcgacaaat tgaacatctt ctactttcgt ttctgtccgt atatcgatgt cataatgttc
     7201 ggcaacaacc gttaaatatt ctgcaaaggt atcacccgat aaatgttctt cattaaatgt
     7261 aaaagcaggt gatgtatctt tagcaatggc attcatgtct ggcataccaa aaccgtttga
     7321 agtaaaggac ggggtaattg tgcgtgtgga tttcggccaa tttttaaaag attgcccaat
     7381 tgcgccagcc tctatgacac aaacatcttc aacatgaagc gtcttcatcg ttatcgccat
     7441 gccaacacct gcagcacctg caccaataat aatgactcgg tgatgttgtt tcattacaat
     7501 ccctctttct aaatcgaaat aattacgatt tattaattgt agaccatcta ctgagtgatt
     7561 gcaatatgaa caacttgacg atgcgcttgt cattatgatc cataaagcat aaaagaaaac
     7621 gaggatggat ataaaaattt tgatatccta acctcgtcat gatatgaagc gtgacagcct
     7681 atttggcaat gttcagcacg atacacgact tgtgccactc caattcaaac acctatcaat
     7741 ccaacgtgtc attcaacagg cgctcaatcg ccaaacccac ttcaaatcgt tgcacatagg
     7801 tgttaaaact ttcgatatca cgcgcttgtg gcgccatcgt ttcagtctca acgtcacgaa
     7861 agccgacatg ttctaaaaac gccgctaacg tgccattgtt ctctaacata tatcttgcta
     7921 acattgccat gccccatgcg ccgccctcat tcgcattctc catcactgtg actggacttt
     7981 ctaacgccgc tgctaaataa cgttgtacca cttgtttcgt cgcaaaaact ccgccgtgac
     8041 ctgtcatccg ttctatttgc agttgctccc gtgttttcaa tcgatcaaca cctattttga
     8101 gtgtactgag catcgtaaaa atatggtttt tcatgaagtt ttggatatta aaacgactgt
     8161 cttgttgccg tataaataat ggaaatcctc taggaacatc agtcatgtat tcacctgaaa
     8221 tatagccata tgataacagt tttcctaagt catcgtctcc atctaatgca ctttcgaata
     8281 aacgtgtcca taacgtcgtc ttatcgtatg acatatccat aagttgaaaa acctcttcaa
     8341 ataaatgtac ccaatgattc aaatctgacg acccattatt cgcatgaatc atcgccactt
     8401 catctccagc tggcgtcgtc acaatgtcga cctccgggta tacggctttc agtggctgtt
     8461 cgaggacaat catagcgaaa atactcgtcc ctgccgatac atttccggtt tttggcgcaa
     8521 tactgttggt cgccaccata cctgtacctg cgtcgccttc tggtgcacac atcgggcatc
     8581 ccgacgttaa cgtgccagtt ggatccaata agcgtgcgcc gtctgccgtc aaagtcccca
     8641 cttgctcacc agccacgtgg actgtcggta aaatacgctg tatgtcttga tcatatccat
     8701 ttgttgccat taatgtatcg aactgttcac ataagtcttt tcgatatgtg gcagtcttgg
     8761 ggtcgatagg aaacatcccc gaagcatcac caattccgag cactttttct cccgttaatt
     8821 gccaatgaac gtaacccgat aacgtcgtca tgtacgcgac atccttcaca tgtgattctt
     8881 ctttcaacgc actttgataa taatgtgcaa tactccaacg ttcaggaata ttgaactgaa
     8941 atgcttctct taactgttta cctgcttcat gtgcggtatt attacgccac gtccgaaaag
     9001 ggacaagcag ttgaccttgt gcatcaaaca ctaaataacc atgcatcatc ccgctaatcc
     9061 ctaaacttgc catgtgcgtg agtttcacct catatgtcgc ttttatttcc cgggtcatca
     9121 aacgaaaact ctctcgaatc ccttgccaaa cttcatctaa atcataggac caatatccgt
     9181 cagtcagttg ttgttcccat tcataatgcc cagtcgcaat cgtgcgtgtc gtcgaatcaa
     9241 tagcgacagt tttgatgcgc gtcgaaccta attcgatacc tactgaaatg ttccccgctt
     9301 cgatttgttg acgtatcgtt tgcttgtcca tcctatcacc tcgttcgtct tcttaccttt
     9361 tattgtataa agattgttaa atgaaaccaa gacatgttgc tcacgaaaat accccatata
     9421 cgtctatttg atgatgcttg ttttattaca cagtcgagtt gagatctttc acgctcgcat
     9481 ctctattttg tcatagttaa agcgcgcatg agataaacca tcatcccata cgcgctttaa
     9541 taattgttat gcttgataat atgataagaa acgttccaat cgattacatg cttcctcgat
     9601 tgttggcatg tcacatgcaa aggataaacg tacataacct tctgcaaaat ctgaaaatga
     9661 cttgcccggt acgatggcca actgttcacg ttctaacaat tgattacaaa aacggaatga
     9721 atcttgatcg tacgccgaca cattcgggaa aatataaaat gtcccttgtg gtaatgtgac
     9781 tgataggccc atatctgtca aacgttggta aatataatca cgacgttcac gatacgcggc
     9841 attcatcttt tcaatatcgg cagccccttc tttcaatgca cgaatcgcac cgtattgact
     9901 aggtgtcgcc acacaaattg aattatataa atggacggtc gtcacttctt caatcaattc
     9961 aggggtcgag agcacataac caacacgcgc acccgtcatc gcatgtgatt tcgataaacc
    10021 attcacgaca aacagttgct tgcgaatctc aggaaactcc ataaatgaac gatgtcgtcc
    10081 ttcaaataca ttttcactat aaatttcgtc cgtaataatg aaaatattcg tctctttcaa
    10141 tactgctaca atttccgcaa tattttcata tgataatgtc gtcccagttg gattcgtcgg
    10201 atagttaaac ataattgctt tcgtttgagg tgtgatggcc gccttaatcg catcagcagt
    10261 cggcacaaaa ccggtatgtg aggtatcaat ccatttcacc tcagcacctt gtagtttgac
    10321 aatcggctca taccctaaat acgttggccc cggtaagatg acctcttctc ctggatttag
    10381 aatcgttcgt aagatgtcat caatcccttc tgatgccccg ttagtcacga caatttctgt
    10441 ttcaggatca tatgttacac caaatctttc agctgtatat tctgaaatcg cggtacgtaa
    10501 ttccaacaac cctttattgt gtgtatattt caatcgcccc tcttgaattg cttgaatcat
    10561 tgcgtcttgc acatatgaag caacagggaa gtcagactgc ccgagcgtta aatctaaaca
    10621 gtttgggtat tgatcaacct tattcgcaaa ctgacgtgtt ccaggtacct caatgtcttt
    10681 aatatgattg tttagtaact ccatttcata gatgccccct taataatatg tgtatggtgc
    10741 aatatagata acttcaacac cacattttat gcttcttttt tacgctgaaa ttgagacatg
    10801 atgattaata ttatagcatt aacaagtatt gcataaaata ttgtcgcagt agattgtggt
    10861 cctgtgatgg cgataccgat aaaaatgacg atcacacttg cgataatggc gtaaaatgcc
    10921 gcttgtggtg taatgcgttt catgaataag cctaaaacga ctggcataaa gatacctcct
    10981 gtcaaaatcg cataggcaat atctatcgca acgagaactt ctttcaccca aatcgaaatg
    11041 actattgcaa tgactgcgag aatgcatgta gtcaaacgtg tcagccctaa aaattgatga
    11101 tcttccatat ttttaaaaac ataaggtttc aacaagtcat tcgaaataat cgtagctgat
    11161 gcaagtaatg tccctgatgc tgtagacata atcgccgcaa ttaaagcagc aaagacgatc
    11221 cctaataagc cattcggtaa tatttcaaaa gccatatgtg cgaatacgtt ttgcgtattt
    11281 tggatgtttg gaaataatac atacgcacac atgccgacaa tgaccatcac aatagaataa
    11341 agtgcgctat acagacccac caacactcct gaggcctttg agacacgctt cgtcttccct
    11401 gtaaagaaac gttgccaaat gtcttgtcca accatgacac ctagtgtata tgtcacaaag
    11461 taattcacaa tttccccaac accgatattg aaaaaactta aatgtgacgc tggcagttgt
    11521 tcaattaatg tcgtcaatcc tccaacacta tgtaaactca tcggcaacat aatacaaaaa
    11581 acacctatag tcatcactaa aaattgaatg acgtcagtaa tcgagagtgt ccacatgcct
    11641 cctagaatcg tatacacaaa gacaatactc ccaccaacaa gaatcgctgt catcataggc
    11701 caatgaaaaa tttgggacac gacggcaccc atcgcaatga cttgtgtcac acaaatcata
    11761 agcgtataca ttgctgtaac gactgcgccc atcactctta cacgatggcc aaataatcga
    11821 tataacagtt cactaatcgt aatcacttgt aaatccataa tgcgatcaag taaaaacaag
    11881 ccaaatatcg taataccgac acccagtgaa aatacaaacc aaaagcctga aagaccaatt
    11941 tcatagccta attgtgaagt tccgatagta gaagaaccac ctaaaaatac agctgttaga
    12001 catccaaaca acatccatag ccctaaatta cggtcagcca ccatatattt ttcagatgat
    12061 tttgctttta atacaccaat gatacccact gaaatgagtg ctgcaaagta aatgataaat
    12121 actataaaat ctattgtttt cattttaatc aactcgcttt gtgttttgtt gtttatcctt
    12181 tttgtacatg gtgatgcatt accgaaaccc ccatcatttt cagaataatc cttcgcgcga
    12241 gtgtcatctt aagtttgtga atcatacatt ttcgggcgat cgttaaacac cctactctcg
    12301 ccctacaccc ccctttcttt tcccatgtat ccacgtcaag tattctcata gctagcctga
    12361 gaatctaagc accgtaataa cggcaatgtc cctttacttt gatacattaa aatctacccc
    12421 tttgtcatat ttctttattt tctaaaaatt ataaacttta tacatcaaat gtaaagtatt
    12481 aatcgttttc gacaaaagaa attcttatac tataaaatag acaagcaggg agacatatag
    12541 taatttatat agataaaagg caacgcacac catatgcatt acctcaatga gaccgttaaa
    12601 tagacgatgg ctttgttaaa tataaaaaat aaccatttaa ctcgtccaaa gttagaaatg
    12661 gttatttttt gacattaata gcaataaaaa cgactaaaca gatgcgcgct acgataaaat
    12721 taccgaaagc aaagatcagc atgcgcacgt ctatcacatt gattattcac ggcctctcct
    12781 ttttaaagat ttcgttgatg cgtgcatagg catcacctca ctttatacta agttagccac
    12841 tatccatcta actttctcac accctcattt tatagtccac tttaaatttt tcctataatt
    12901 atatttaact taaattttat ttaatttttc atttaataga agtacctagc ctaagttctc
    12961 agctttctga tgtcccatct cttcaatttt tcaagctttt atctccacct tcaaaataaa
    13021 ataaaaattt gatgataaaa caaaaaagac tcgaatcatc attgaaatag tcacactatc
    13081 tcaagacgac tcgagtctca aatcaccaaa tgaattaacc aatataagct ttcaacatcc
    13141 aaatgttatg ttctaattct gtcgcaattt cgataaacat gtctgctgaa cgatcatcgc
    13201 cagcttcttc tgcgttacct tgcgcttgtt ttaattcttt aaccactgtt tcgaagtctg
    13261 tagctaattg tgcaaccatt tgctcagctg aaatattttt ctcagcttct tcaatacttg
    13321 aaacttctaa aacttctttc attgtaccta ctggattacc ttctaatgca agtgcacgct
    13381 cagcaatttc atctacatag acagccactt tgttataaag ttcttcaaat ttttcatgta
    13441 atgcgaagaa attgtgacct ttaacgtacc aatgatagtt gtgaatttta gtccataata
    13501 ctgtgaagtt tgatagttgt aagtttaagt cttcaacgac ttgttctctg ccttgagcca
    13561 tttataatct cacctttcta gcttccattc atttatattt ttactgaatt atacatgtat
    13621 attttaaccg atataggttg tactcaaaca cgaacagcga aatgttcatg tgttcttcac
    13681 atttagattt tagagtgtaa atactccgac atcgctttca ctttgtcagc gtcactctct
    13741 tctagcgtga atacgccgta gtcaaatgtg atttccaacg cattatctat cgttttaatt
    13801 cctttgattt cactaaattg gatatttcgg taataaaatt gaccatccat atccacattt
    13861 aaaatcagac gttcatttgt cgcaacatat gctgcttcaa aacgttttgt catgtctttc
    13921 atttgataag gcatgatccc taatacagac gtttcaatat gttctgttgg aaataagtcg
    13981 tctgggttga ttctatctaa tatcatttca aaaacctctc gaattttaaa tttaacaatc
    14041 gcgcatatga tttaccgtgt gtgagacagt ggatcatata cggcgcatca aaggcgatcg
    14101 tcttcaagat gcagtatgtg cgcgctatca aatcaatcgc ctttaatgat accgtgtgtt
    14161 aaacgggagc tgtaagggtg atcacagctt gattatttaa ttattgatta atgggtcgac
    14221 attagatttc agcgataata cttgctaatt gatcttccat acctaatgct ttggccacac
    14281 ctgtaccgta gtttacgtca gcttggtaac agtttttgat atgacggcgt tttacttcat
    14341 cagttgttcc ttgcatttca tttgcagtat tttggaagat acgttgctgt tgttcaggtg
    14401 attgtaggcg gaacaattta cctggttgtt cgaagtagtt gtcatcgtct tctctgaaat
    14461 catactcata cgccccgccc tctatttcta gtggtggacg tttgtattct ggttggcttt
    14521 ggtgtgcacc ataactattt ggatagtagt gtgtttggcc accttggtta ccatctaaga
    14581 aacgcattgc accgtcacgg ctgaatgggc aaatattttc tacaccaacg ccttttggtt
    14641 ggttaactgg aatttgccag tggtttacac ctagacgata tcgttgtgca tcgccataag
    14701 agaataaacg accttgtaac attttatctg gtgagaaatc taaaccagga ataatgtttg
    14761 tcggtgcgaa tgctgcttgc tcaacatcca tgaagtagtt ttcagggtta cgatttaatt
    14821 cgaattctcc tacttcaatt aaaggatact ctcctttgta ccatactttt gttaggtcaa
    14881 atgggttgtc tttatggttt ttcgcttgtt cttcagtcat gacttgaatg tacattttcc
    14941 atttagggaa gtcaccttcc tcaatggcat tgtacaagtc acgttgtgaa gattcacggt
    15001 catttgcgat tattgctgcc gcttcatcag gttgtaagtt ttcgatacct tgttgtgttc
    15061 tgaagtggaa tttgacccaa acacgttcat tattagcatt aatcatgcca taagtatgtg
    15121 aaccgaagcc gtgcatatgt ctgtaacctt ttggaatacc acggtctgtc attaagatag
    15181 tgacttgatg taaggcttca ggtaatgatg tccagaaatc ccagttattt tgggcacttc
    15241 tcatgttagt acgtgggtca cgtttcacag catggtttaa gcttgcgaat aattttggat
    15301 cacggaagaa gaatactggt gtgttattac ctacaagatc ccagttccca tcttcagtgt
    15361 agaatttcaa tgcgaaacca cggatgtcac gttctgcatc tgctgctcca cgttcaccag
    15421 ctactgtaga aaaacgtgcg aacatttcag tttttttacc tacttctgaa aagattttcg
    15481 cgtttgtata ttttgtaatg tcatttgtta cagtaaaagt accgaacgca cctgaacctt
    15541 tcgcatgcat acgacgctca ggaataacct cacgatcaaa gtgtgccatt tgttctaaaa
    15601 agtaccagtc ttgcatcaat aaaggaccac gtggacccgc agtcatcgag ttttcacggt
    15661 cactgacagg atggccaaat aagcccgtta attttgattc atctctgttc atatattcac
    15721 acctctagat tagaattatt ttaatttagt ataccattag tttaaactaa ttacaaagtg
    15781 attcctctaa aaaactaaaa aattttgtta tttaccaact taaaacattc attaaacgcc
    15841 gtcctatcaa catcgaaata actatagctg atttatgtca agatgaaaga acttaaaaat
    15901 atcacttctt ctcttcttac tccattttca actagatacc tctatcatca gttaaaaagt
    15961 caaagtgcat cattcacttc tagttctcct aaagcaattt gaatatgtgc aagatgatga
    16021 cgtgcatgcc atgataactt tgcaactgtt tcccccaccg ttgttgcacc actgccctct
    16081 aacacaaaat ctcttgccag ttctttttct gttaaatgtt gacctattgc aacgacacgt
    16141 tgattaatcg catcaagcat ttggatagat acttctattg gtaaatctga atcagccaac
    16201 ttgacccatt catcttgggc aaaattggac actttaggat gtgtatcagt caaggccaat
    16261 tttaaccgct gaaacatatt catctgtgag tctgcaatat gatggacaag ttgttgtacc
    16321 gtaaagcttc cctctcgata ggtcgtccgc aaatcttctt ggctcaaatt tgctactgtt
    16381 tttcttaaat tttgtatata ttgcgcaatt tcttctagcc aagaatcgat gtgtctacgc
    16441 gtcacagttg ctggcacttc taaccttcca atcggatatc ttacatccat aatgacccct
    16501 ccattcatag tataagacac tttaatcata tcatttcaca ctacatatgt aattcgatac
    16561 gactaatcaa aaagcatatc ccattgttct ttttctaaat cctattatta tttttaccct
    16621 ttacgattgc atactatgct tttatttcac tctttatata gtgcaatagt aacaaaagtt
    16681 atctccccaa tctttgacct tgactaactt tgactattga tatatacttt aattacaagg
    16741 aaggattggg atatcaagtt ttgctagcct cattcttacg atttatagat ttacgactta
    16801 ttaatgattt gataactgtc ggaaaacgaa ataccatatc aacaacatca aaatttttgt
    16861 gtcccatttc cgaaaattta aagtcgcgtt agagctattc aaacactaac gtaatgaagg
    16921 agagatgtat tatggctttt gatatgagac cttttaacca ttcatttttc aatatggaac
    16981 ctagtgattt cttcaaagat ttcggtcgtc acatgttaga cgaatcattt gcaacacctc
    17041 atattagaac agatattaaa gaactagatg atgcttacgt gatagaagca gaattgcccg
    17101 gtatggataa agaaaatatt caattaaaat ttgaaaacaa cgtgttaact attgctgcac
    17161 aaaacactgt aaaaaatcat aaagaagatg aagaaggaca cgtcattcga caagaacgcc
    17221 acttcagtcg tatgcaacgt caatttactt ttaataacgt agatgaaagc aatattaaag
    17281 cttcttatca aaatggcatg ttaaatgtga cattaaacaa acgcacccca ggacgttctt
    17341 caaactctga cattcctatt gattaaaaca tcacactgct atatgaatgt cataatcttt
    17401 ctatgttgag cgcatcttgt cccctcacat gatgcgcttt ttacatatca tcaacgcttt
    17461 tatcttctta ctgttcattc atatccccag gaattatcta cggtacgtct taactcataa
    17521 aactacattg aaattccatg acacgaaaag cgttgtacag tttggctaca ccctatttgt
    17581 tagattaaac aaactttgac gctatcatat tcatcacatc gttcaactta tatgctcaaa
    17641 cattaaacaa atattaacta ttattaaata cacttaataa tgcaatattt atctattttt
    17701 atgttatagt tgttctaaca aaacaaagga gttgtataat atgaataaaa cattaattgc
    17761 tggtataaca gtagccgctt tatcgacagg aattttcgcc acagccacgg gacacgaggc
    17821 acacgctcaa gtgacagcac aaaatggtat cgttttacat gatgattcca aattacttgc
    17881 tcatgaatta gattatgtag atgtattgat taatccaaat acggacccac aaacaaaagc
    17941 acaacttcaa gattattttg ctaaacaagg tttaaactct gtaagtgaca tcgttcaaaa
    18001 agcaaaacaa gacggtctcg acacatcaaa atacaatcat ttaatttaac atataacgct
    18061 tatacacttt ctaacgctta atctattatg ccatcacctt atcgctattt gtaggtgatg
    18121 gcttttttat gaccagccac tttatttttt aatgtgggtc gcccacctca cttcataaaa
    18181 taaggtgatt ccctttgtca atgttactct ctaacttttt aatattcagt ccatcttttc
    18241 tttagaatca taccttgggg cttcgttatc atattcatat gaactaacaa gcatattgag
    18301 gaggcagtcg tatggacaga gacatcaaaa gtacgcgctc tgaatggcgt catattattt
    18361 ataatgaagt taaaaattta ttaaacaaag agatgaaaga tttacctgtc gcactcaaac
    18421 caacagatag catgatagca aaatatcaac gtatgaagat tccaaaagaa ggaaaaggta
    18481 ttgaggcagt gatggattta ttacataccg aggttttaaa ttataactat cgttcgaatc
    18541 atccccgcac attttcgttt gttccgggac cagcttcaca attatcttgg cttactgatt
    18601 tttttacgag tgcgcacaac attcacgctt caaattttgc gaatgcacca cttcctattg
    18661 caattgaaca tcgattaatt cgctatttaa gtgaagaaat aggtttcgat tccgcattgt
    18721 ctggcggcgt ctttgtgtca ggtggttcga tggcgacatt gactgcgatt actgcgggta
    18781 gagatgcgat gattccactc tcacaaatgt ctgaagcaac ggtatattta acagctcaag
    18841 cacacttttc tgtcgcaaaa gcattccaca ttgctggttt tgcgcaaaca caactccgct
    18901 atattccgac tgacgatttt tataccatgg acgttaatgc tttagagcaa caaattgaat
    18961 tagacatcac taatggctat cgtcctatta tgattgtcgc aacggcagga actaccaata
    19021 caggcgccat tgataattta acgcatatta cacgtattgc acgtcaacat caaatgtggg
    19081 ttcatgctga cggggctttt ggtttatcac acattttcac tgaagaaggt aaaaaattac
    19141 taaaagacat cgacaaggta gacagtgtca catgggatgc acacaagttg ttatttcaaa
    19201 catacagctg tgctatggtt atcgttaaaa ataaaaatca tctcctgtct acttatgggg
    19261 ttacagcaga atatttggat gatatcactt caacaaatga acatatcgac ccagaaaaac
    19321 taggtataga attaacacgc ccgcctcgcg gattaaagct gtgggtaacg ttacaagtac
    19381 tcggcgaaaa tgaaattaaa cgacgtattg aacatgggca agaaatggcg cgctatgtcg
    19441 aacaacaagt tcaacagatg aaaaattgga aaatcgtcac aacctcacaa ctttctgtta
    19501 taaatatccg ctacgaagat ccaactaaga caccggaaga aaatgatcaa gtgatgcaat
    19561 ttgctgcttc acgtatcata caatcaggtt atgccgctac gtatactaca gaattaagcc
    19621 atcgccgtgt tattcgtttt tgtacaattc atccagaaac gacacgcgct gacattgatg
    19681 gtacattaca gcgtctaaat aactatgtcc aagaagcatc aagccagcca caaacttaaa
    19741 ggtctagaat acaaaagtga tatacggggc tgggatatca gttgtcccac cccatgcttt
    19801 atgtttgatt ctaacgtttc atgtcaatcc ttcttcactt gatgtaatac gatagatgtg
    19861 ttgaattctg caatacgttc cattttcaaa atcaacgcat ttaaactcgc aatatctttt
    19921 gtatatccat gtatgatata tttttcagtt ccagtcacag catagtattc tcgaaaatcc
    19981 gaaaattgtt gaaggcgttt ttcaaattct gaaattgcaa ttttaatttc ggtcactttc
    20041 atgaaaaaac caatcatgta acctaacttt tcatagttca catctacatt aaacccgtga
    20101 atcaccttcg actctatcat tttagaaatt cgatttttaa cactgggttc tgataacatc
    20161 actatagaag atatggtttt cactttcata cgtgcgtttg tttttagcag ttttaatatt
    20221 tttagatcaa tatcatccat caaatgacct actttctcta ttaatattga ctatgacctc
    20281 gaaaacttcg cttcaaagtg aacattgcag tgcttactct tattgttttc attatataaa
    20341 tagaaacttg tcacattcaa ttttaaaatg atacccctta tcgccttttc tatactaaat
    20401 tgttatactg atacacattc atctctttac acaacaggta gaaatgacct atttacacga
    20461 tcccccacgt aaatgagaaa aatgaaaaac ttagacacgt atcaaatgcc caacatactt
    20521 aaaatttgag atactgaatt aatcataatg tgaagcgcta ttgcaactaa aatattgcgt
    20581 cctgaagcga tatagatgta tgtcatcgca atccctccaa ccatataggg gacaaatgtc
    20641 catatcgatg taaaatgaag gaaatgcgct gcaccaaaag caattataga aacgactgcc
    20701 atccatcgaa atccccattt ttttccgagt tcaccaataa tgagatgtcg aaataacaat
    20761 tcttcaacta ttggagttaa aatgccaatc gtcacaaaac ttagtggtat tgtaattaaa
    20821 tcatcctgta tcgtcattgg aggaatgaca cgctgataaa taaaaataaa gctaactagc
    20881 aataaataaa cgatgatgat acgccacaaa tgttgacgca taccaatgag ttgcgttttg
    20941 atcctagcaa caacatgttg gcgatgtaac aacataaaaa tggcgataac aatcacttgg
    21001 gccaagcaca tcatcacatt aaaaagaatg ttgtagcctg atggttgtaa cgtataatca
    21061 aaaagcctct ctaatagatt cgggaaaact tcttctgcta ataacggaaa agtgtattgc
    21121 aataaaataa agacagggac aatgataaaa tcgcgataat aaataggttt ccccgcagtt
    21181 ggtaaagttg tcatgtgaat actcctttat atgtgtcact ttaatcacgt caattcacta
    21241 taccaataac agtacacctt tacaataatg caccgagcca tttgctttcc ccactaaacc
    21301 taccctgtcc ttatgatgct tttttcccat aaatagaaac tttcacgaag cattccaaaa
    21361 aaaaattacg aattcgaggt ttttttgttg atatattttt tatacctgtt ataataacat
    21421 tatcaattct tgaaaaaagg aaggaaatca taattatggc taaattactt tatattacag
    21481 cacaccctct tgacgaatta ctttcagctt caatggctgc cggtaaaact tttaaagaaa
    21541 cttacgaaaa agcgcaccca gaagatgaag ttgtacacat cgacttattc aaagaagata
    21601 tcccacaaat tgatgcagat gtctttactg gttggggtaa attacaaaac ggagaaactt
    21661 taacagaagc tgaagagaaa aaagtaaatc gtttaggtga aatcgttgat gaattcatca
    21721 atgcagataa atatgtattc gtttcaccaa tgtggaactt atcattccca cctgtactta
    21781 aagcatatat cgatgcagtt gcagtagcag gtaaaacttt caaatatact ccagaaggtc
    21841 ctgttggttt attaactgac aaaaaagctt tacacattca agcacgtggc ggtttctact
    21901 ctgaaggccc tggtgttgac ctagaacacg gtgaccgtta cattaaaaca atgatggcat
    21961 tctttggtgt accttcttat gaaacaatta ttgttgaagg acatcatgct gctccagaac
    22021 gtagtgaaga aattaaagca cattcacttc gtcaagctga agaacttgga cacaacttct
    22081 aatattgact ttaaccttaa aaaggcgctt accatatcct ttatggaagc gtcttttttg
    22141 tagtgtaata tatgcttatg ttttattgtc tggtgcattt ctttagtcac atgattaatg
    22201 taattcccct ctgccctcaa accatttaga aagaagcaat cacatttcaa atttgcaccg
    22261 tcaacttcac ttcccacttt taagctatac ctctattgtc cgttacataa aaaataaatg
    22321 atattaaatt catctaattt gtgaacattg tcacattgat attgtgcaat gagataggat
    22381 tgtatataat aaattcggag gtataaaaag tatacttacg aacaattcaa tgcatttaca
    22441 aatataatga ggaggcgtat gtctaatgat tagatggtta caacaaagta ctatagcaag
    22501 tattttattg cttattttcc gtatttacct tggatacggt tggtttatgg caggtctagg
    22561 aaaaattacg aatggcaagg ggttcgacgc tggtggtttt ctacaaaacg ctgtgcttca
    22621 ccctgttata ggtgtggatg gtagtacaca atacccacta ttcacttcgt ttttagaaca
    22681 tattgtgcta ccgatgacac cgtttattaa tatattaata ccaatttcag agattgttgt
    22741 tggcctacta ttaatttttg gcctattcac tccaatcggg gcattcatcg gtttagtatt
    22801 aaacttttta ttcttattcg ctggaaccgt ttcaatcaat ccactctata ttttaatcgg
    22861 atttttcatc tttgtcgctg gttacaatag tggacacttc ggcgtggatc gtttcttaaa
    22921 atcactttta agcaaaaagt ttttcagcat ctttaactat catccagaaa ctaaagatac
    22981 aagcgtttaa acttttattt tgactatcaa ccagggcgca cttgtgtggc agttcaactg
    23041 catgatatca caagtacgcc ctggtttttt atgttttcat attgcattgc catacatcac
    23101 tttcaaattt cagcaatgat tcaaaaattt attaaactct ctatttatcg cttaattcgt
    23161 gcctattata tcgtgggttt tcatcaaaca ctttaacaca acagatttat cttacttaaa
    23221 aagagtccca ttttttgaaa catcactcac taagaattca acggcttctc tacacctcgc
    23281 actgattctt ccattcaata tgtccatcaa aatttagtaa tagtatgtta cttatatcgg
    23341 attaaattac tattagcact gtatttatgt cactttattt tataattaag cctcaatctt
    23401 tattaaatat atacatcacg atgacataat ttgtccttta agatattcgt gtaaagtgtt
    23461 tgttacctat tctttaaaaa gtgacattga attgaaacta agttgtacac ataaatgtcc
    23521 caagcattac ttataataca gtaaaagaga gaaggtgagg cattgaaacg
//
LOCUS       DANHPA010000029        23280 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.029, whole genome shotgun sequence.
ACCESSION   DANHPA010000029 DANHPA010000000
VERSION     DANHPA010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 23280)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23280)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23280
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.029"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(28..1626)
                     /locus_tag="PTC28_000940"
     CDS             complement(28..1626)
                     /locus_tag="PTC28_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HDK5716240.1"
                     /translation="MKTHWQTAAGRALLLKQLVAHQSVTHSEGEQSFPYLVKDQLMSL
                     DYFKAHPEQIHLVPTDDGRHAVVALYLGATSHKAVTCISHFDTVGIEDFGLYQSEAFD
                     MDRLTATFQGHVEDFDKEVQVDIQSGQYLFGRGSMDMKPGLMLHMSLIEKAIIEQWDI
                     NLILMTVPDEEVTSKGMHAAVAHLDELCQQHQLDIVLHLNSEPTFQQQGNDIHYFYSG
                     SIGKIMPGVFVNGRETHVGTPALGLSSNFMMSYILQEIEYSARFKETFEGESTPFPVT
                     LKMNDVKHHYDVQTPFRTVALFNLFLFKQNANDVFQQFNAAVKEGMHKAWAAYQQRMK
                     DEDVAPLPQLQLLTYQELYQYACQHHGERAVQDRVDQAIQNEQEPHAQSILIIDALIR
                     LCKSLGPVVVTFFAPPYYPATNASFHPLVEAIKQTITDTAKQQFNRVSERIHYFNGIS
                     DLSYVAPSPNGSGFDAFRDHTPVFGQTYHIPFEAIERIQAPFLNCGPIGKDAHKVTER
                     VHQQSAFEELPIILETIIKTHFLS"
     gene            1810..2166
                     /locus_tag="PTC28_000941"
     CDS             1810..2166
                     /locus_tag="PTC28_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3139 domain-containing protein"
                     /protein_id="HDK5716241.1"
                     /translation="MLKKIIGIILSLIVIFIVVAGAFFAFKGYQKSQNLKMIDQYLTE
                     NHLKDKVIEEKDEYDPRKGIFYKELTIKGDEKNTYIAQPIHMKRGFFLQGFNTETKKH
                     DKNAKYSFFDEDYKLK"
     gene            complement(2334..3281)
                     /locus_tag="PTC28_000942"
     CDS             complement(2334..3281)
                     /locus_tag="PTC28_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate dehydrogenase"
                     /protein_id="HDK5716242.1"
                     /translation="MINKVALIGLGRVGSQILTDIQYAGLFQEIILIDTDRDRIEGEA
                     LDHEHFQGLSGTHHTRIKVGTYEMLADVDLIIISASIPSNADMADRTKLTAYNTKIIQ
                     EIMAQITAVTTSPHIMMISNPVDTMTYIAEVQFNYPHHKIMGTGTMLESTRFRTLIAN
                     HYQVDPKNVEAFVIGEHGKTTVPVWSRVRIAGMSLEEYEQLNGATPISKQGIRDQIDK
                     VSFDVMRKKGWTNSAISRVAVDLAEAIFYDENRILPISTVHQNVYDYTNVAFSLPTRV
                     NRDGHHEIFPIQLDAEEKTALDQSVDYIQQAIATAESVK"
     gene            3462..4535
                     /locus_tag="PTC28_000943"
     CDS             3462..4535
                     /locus_tag="PTC28_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HDK5716243.1"
                     /translation="MKDTKALLQQLTDLNGIAGHEYNIKKMMNDLLEPNSDEMIYDNL
                     GGVFGKKYSKTGQRTIMIAGHLDEIGFMITKIDDNGFIRFTQVGSWWNQVMLSQKVTI
                     TTDEGRQIRGIIGSKPPHVLTPEERKRPVEMKHMFIDVGAKDKAEVEAAGIEIGNMIT
                     PYSEFETLLNEDYMTAKAFDNRFGCAVAVDVMDELKDEDINVNLVAGANVQEEVGLRG
                     AKVAAHKVKPDLAIAVDVGVAYDTPGLESNGDTKVGNGPIVLNLDATNIGHVGLIRHV
                     KNVAKANGIDLQWDSIPGGGTDAGSFHTALDGIPSIALSLPLRYMHSNVSILSRKDYQ
                     AVVKLVTEIIRALNDEVIDEIIW"
     gene            4707..5612
                     /locus_tag="PTC28_000944"
     CDS             4707..5612
                     /locus_tag="PTC28_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDK5716244.1"
                     /translation="MTQQHQKRWLGYLLVIIGASFWGIGGTVSQWLFQHANVDVTWFV
                     AVRLMLSGLLLLGIAFISEGPKVFHIWRDKRSTAQILIYGLFGMLTVQYTFMVTISYG
                     NAAVATLLQYLGLIFIIFYLVFRKVTKIGVKEIVAVLLALTGTFLLLTNGNILNLQVP
                     KLTIVWGLLSAIALAFYTIYPVKLLARWSSLTVVGWAMFIGGCALSIVHPPWQMDFTT
                     WTLPTYLYFGFAIIFGTMLAFWFYIDSLRYLHPHESGLLGTLEPLTALLTSVVWLHTT
                     FGVWQLVGVACIIMMVVIISVVQNK"
     gene            complement(5967..6302)
                     /locus_tag="PTC28_000945"
     CDS             complement(5967..6302)
                     /locus_tag="PTC28_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4889 domain-containing protein"
                     /protein_id="HDK5716245.1"
                     /translation="MKEKQTIGIVLIVAMLVVTVGVVVAMMLAGQKETYYGYMKDDTT
                     AEKVVSESEKTVETNVKIPTDDDFRPEKGDFVKLVAKKDEPHVYIKKKIVSHDDVPHG
                     LMMKIHDMH"
     gene            6586..7779
                     /locus_tag="PTC28_000946"
     CDS             6586..7779
                     /locus_tag="PTC28_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5716246.1"
                     /translation="MSEFNGHQKIQDQWLLVFGIILIAATLRAPLTAVGPVIQQVKTD
                     LHINNGIAGLITTIPLIIFGVVSPFVSRMLSKISMSRFLFLTLMLTMVALLIRILGGI
                     LTFFIGTVLLGVSIALANVTLPAYAKWAFPTQIGLITGIYSATMNFTAGLGGGLSYPL
                     STVTSLSYRFSLVFWVAFAVVAFVIWLPQLKQASYLASQQHEGLRKPIYCSKIAWAVA
                     LTMAFQSMMFYSIVAWYPSILVSKGIEPEMAGYFLMLNQFSQLPMTFTFPIIAAKMST
                     QRSLISIVAALMSVGFMLLFFNNTWILLMAMILTGMGIGACFSLCMTMFSIRSKTTAG
                     SMALSGFGQSVGYWIAAIGPFLLGMAHDLLNNWTVTIVLFLMMVVAVFSAGMIAAQNK
                     YIEDE"
     gene            complement(7865..9958)
                     /locus_tag="PTC28_000947"
     CDS             complement(7865..9958)
                     /locus_tag="PTC28_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDK5716247.1"
                     /translation="MQGITIELMKQYTSSAYRVFNRIELFVSFEGVLTLELNGKKSHF
                     YHQVAIINHNDIVKVKDAQAVAKISIPLHYFSEYQPHYLLGFFNQEKLSSHNIITTQI
                     KKVITENNTDQYFECFKPIIEMLVNECFIDTGAVHVPRVQVKSILFNNIMDYVHQRPL
                     SRLSLPELSEHFFVTESYISTLFNRYLNYTFKKYFVSLKIGLSMYHLLHTNESINQIA
                     LYYQFSSYNHYSKQFKRFIGVSPIAFRKQHQKQVIQVDIQPFDDQYFEGHLLDVLEKF
                     NANQPLSIYLNQSQQTRWLPSKRLLLEVQHMREMMQIFHPTPHVQTYQKATPITLYFN
                     ATSWGNITFDNLDEVKCLSQLVYHHQYGIAYRISSMQSYEKFKLHFLQPLLQVLRQSA
                     IDFDMSQLYFNLVLDDATLLARDIKFIIQEMKTLLESCQFTLLIYIPMPQRTLQLDTD
                     FDYYMVDMSLVNSTAQSTSSSLQLTHPFHRQLKDWLEDYNLNQRPILLSGVNEWLYAQ
                     KEEKVHPREWLEIWLNMHHTVQGLTLPLICHQPEMHGYFDRLGHQTALQHVFHLMQPF
                     NHSHSVVERSYVVHESRLAYDILLFHPYQVQNDQKDLTYELYGTLELHQHLVAEYTYH
                     PKYSNIDDILAKNAEGYYLPPQFISTIHAANQLLFHVQLHHFGKSRYQTTLPVGHIKL
                     IHITKSQAQQQSDIL"
     gene            10534..11973
                     /locus_tag="PTC28_000948"
     CDS             10534..11973
                     /locus_tag="PTC28_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sucrose transporter subunit IIBC"
                     /protein_id="HDK5716248.1"
                     /translation="MAYQKEAATILKAVGGEENIEEMAHCATRLRFTLKDEGKVDEET
                     LSQIDVVKGTFSTSDQYQIIIGSGTVNKVFQAVQTLMKGDTDEHTHQENNKQKKKGHP
                     LQRFVKMLSDIFVPIIPAIVAGGLLMGLNNILTAKGIFSESQSVVEMYPHFAEFASMI
                     NIFASAPFALLPILIGFSAAKRFGGNAFLGAALGAIMVHPALMNGYAYPEALTNGDPI
                     PRWHILGLSIAQVGYQGQVLPTLVATYILAQLEKGLRRVVPTVLDNLLTPLFAILITA
                     FLTFLFVGPLTRTAGFWLTDGLTWLYETGGAVGGFLFGLFYAPIVITGMHHSFIAIET
                     ALIADSAKTGGSFIFPIAAMSNMAQGAAALAAFFLIKQNQKLKGVASAAGVSAVLGIT
                     EPAMFGVNLKLRYPFIGAMTGSALGSAYVSFFKVKATALGAAGIPGVISIAPGSWTHY
                     IIGMCIAFIGSFVITLILSKQKKYQGLAE"
     gene            complement(12670..13608)
                     /locus_tag="PTC28_000949"
     CDS             complement(12670..13608)
                     /locus_tag="PTC28_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HDK5716249.1"
                     /translation="MIRAYRNDADLRVVESEDWEHAQWLNVVKPTQAEIQRLIDMYAF
                     PQDFLEDALDSEESSRIEYDDDSGYSLIISDFPITKSGQYKLKSFTTLPLGIIIGKDI
                     IVTVCAKSFHYFDHLIQKPINLKYKSQFALKVMYDMAAQYNRSLRLLNKERRQVEYNL
                     QQRVTNQRLFLLSEIEKSLVYFLGSLKTNSSTIRHLFRLPAIKRFDDDEELLEDLKNE
                     HQQAVETTELYLRIVESMSNSYASLLSNQLNTTMKTLTIFTVLLTLPTLVFSFFGMNV
                     PLPIDTESGLSWLIIIVLSVVLVVVLFVFLWRNDKL"
     gene            complement(13605..14069)
                     /locus_tag="PTC28_000950"
     CDS             complement(13605..14069)
                     /locus_tag="PTC28_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HDK5716250.1"
                     /translation="MTQNNDYELFLFYYAYQTFTKTADDLIAEYDMSRQHHRFLFFIN
                     KLPGITTKKLLENLEISKQGSHATLKLLKAKGLIYDEPDLTDRRLKRLYPTSEGKALI
                     KKLNRAQSDLFNRIKSEFGEDWYAIMEGFASYRQGYKDIRHLKQDIEEGDAT"
     gene            14480..16135
                     /locus_tag="PTC28_000951"
     CDS             14480..16135
                     /locus_tag="PTC28_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
                     /protein_id="HDK5716251.1"
                     /translation="MSVTEVIFSFLGGLGIFLYGLKIMGDGLQASAGDRLRNILNKYT
                     SNPVLGVLAGMIVTILIQSSTGTTVITIGLVTAGFMTLKQAIGVIMGANIGTTVTAFI
                     IGIDLGEYAMPILALGAFLIFFFKRSKINNIGRVLFGFGSLFFGLEFMGGAVKPLAEL
                     EGFRQLMLDMSSHTIYGILVGIGLTALVQSSSATIGILQEFYSQDLITLQGAIPVLLG
                     DNIGTTITAILASLAGSLAAKRAAFVHVIFNVIGVIIFTLLLPIVIPLIATIQDAWHL
                     KPVMTIAFAHGAFNVTNTLIQLPFVGVLAWIVTKIVPGKDVTEDYKPQHLNKDLVYHA
                     PGVALQETQKELQNVGNIVRSMLDDVHHPSQMDKKMIKNVQQKHQAVVTISDSIRNYL
                     VRISTKNITRKDVERLAVMFDVNRSILKVSELIEAYIEQVNRKKAKEITLTEDAERGI
                     DKLYRFVDESFTKAIETLDVYDTTKKDEVVERSREAFNIEHQLRKGHIKRLNRGECST
                     DGGLLYVDIIAVLERIGYNSRNISEAMVGLNEDVSTEEEVVNV"
     gene            16438..16638
                     /locus_tag="PTC28_000952"
     CDS             16438..16638
                     /locus_tag="PTC28_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716252.1"
                     /translation="MWTQEDEDSENLAPLTELKTGGATTNSGEAGATTAVSPWLWVIS
                     IAALIVALVALFKRRNFTKSDK"
     gene            16846..17304
                     /locus_tag="PTC28_000953"
     CDS             16846..17304
                     /locus_tag="PTC28_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2871 domain-containing protein"
                     /protein_id="HDK5716253.1"
                     /translation="MRRILYAFMTYTVLGLLSGFAYRELTVHYEFTGSTQMSVMHTHL
                     LTLGMFMFLILIPIEKLFKISSYYLFNWYFIIYNIGVLTTVSMQFMKGFKQISGGTIP
                     ASFAGFAGIGHVTITAGFILLFFLLRQAILVSPRDGAVAKDEVKDETPVE"
     gene            complement(17382..17798)
                     /locus_tag="PTC28_000954"
     CDS             complement(17382..17798)
                     /locus_tag="PTC28_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDK5716254.1"
                     /translation="MTTEVKYEIPTPADYCELRRITGLSAKSEAAARVGLPNACFTVT
                     IYDDHQLIGMGRVIGDGATAFQIIDVAVRPKYQGQGHGKVIMQQIMDYIESVRQPGTY
                     VSLIADYPADQLYAQFGFISTEPRSGGMYRHYPVEK"
     gene            complement(17819..18847)
                     /locus_tag="PTC28_000955"
     CDS             complement(17819..18847)
                     /locus_tag="PTC28_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDK5716255.1"
                     /translation="MKDVTIIGGGPAGLYASFYASLRGMDVRIVDVQRELGGKMQIYP
                     EKIIWDIGGVAPQSCYDILKNIIQQGLHFNPEVLLETKVTNIIKHDEHHFEIITADGQ
                     SLTSRAIILAIGAGIIKPLPLKIEGAERFELTNLHYVVQQYQKFKNKDVLISGAGNSA
                     LDWARDLSGYAKSVKLVYRKKDISGHEAMQNILDSLNVQKFPNSKIVQLKSTADDANK
                     INEVVLENGETGETTIHRVDEVIISHGFERELTLLNDSDVTIQTVNDDYVYGEKNTCT
                     SVPGIYACGDIVQHPAKVHLIASAFSDAAHAANSAKQYIDPSAPKEGYVSSHNDVFKE
                     ANRQFLPH"
     gene            complement(19034..20377)
                     /locus_tag="PTC28_000956"
     CDS             complement(19034..20377)
                     /locus_tag="PTC28_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
                     /protein_id="HDK5716256.1"
                     /translation="MKINKKMIFFIGALGGLLYGYDMGVISGALLYLKDDIPLNAYTE
                     GLVVSSMLVGAIVGAGLSGPLSEKLGRRRLVFMISIVFIIGALILALAPTMEILVLGR
                     VIIGLAVGGSTAIVPVYLSELAPTDARGSLSSLNQLMITIGILASYLVNYAFAPIEGW
                     RWMLGLAVVPSVILMIGVIFMPESPRWLLEKRGEKAARDVMKLTYPASEIDHEIENMK
                     KINQIADNTWTVLKSPWLLSTIIIGSVFALLQQLIGINAIIYYAPKIFATAGFGESTA
                     ILSTVGIGVVNVLVTIFAISIIDKIDRKKLLVIGNIGMVASLLIMSALIWLIGVNSAA
                     WIILLCLTTFIIFFGVSWGPVLWVMLPELFPMRARGAATGIAALVLSIGSLLVAQFFP
                     VLTDVLQVQQVFLIFAVIGIIAMIFVIKFLPETRGRSLEQIEQDLRARTNAKNVE"
     gene            complement(20614..21609)
                     /locus_tag="PTC28_000957"
     CDS             complement(20614..21609)
                     /locus_tag="PTC28_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDK5716257.1"
                     /translation="MTETFKAFRVTHDEDTLSADFTKLTLDDLSEGDVTIRVHYSSIN
                     YKDVLATKSNNKIIRNYPIVPGIDLAGVVMASDHPSFKEGDKVIATGYDLGVNHDGGF
                     SEVARVKGDWLVHLPEDLTLEEAMIIGTAGFTAAISIQLLEDNKITSTNGPVLVRGAT
                     GGVGVMSVMMLNAIGYKVIASSGQTEHHAQLKALGARTVIPRIDEVTDKALASTEWQA
                     AIDPVGGETLTEVLKRIQRHGAVAVSGNLSGAEFTSTVYPFILRGIRLLGADSVAFPM
                     QRRQHLWRRLSKDLKPAKLHDIKTVVPFSELKTYLAKAEKHDFLGRIVVDLRPEA"
     gene            21741..22259
                     /locus_tag="PTC28_000958"
     CDS             21741..22259
                     /locus_tag="PTC28_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDK5716258.1"
                     /translation="MGYELRKVTVTEVATLQQISKDTFYAAYRNDYEQALFDSYFAEE
                     MSIKKLTAELEDPDMHFFFLYNDDVIVGYVKVNVGAAQTVAKGIQYAELQRIYLYPEY
                     QGQGLGQWLFDFVCDFVKNELGKSKLWLGVWEENRPALNFYLKQGLVKTGVHPFKMGK
                     HIDEDWIMEKDL"
     gene            22364..23068
                     /locus_tag="PTC28_000959"
     CDS             22364..23068
                     /locus_tag="PTC28_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716259.1"
                     /translation="MKRLLASLMIVPLLLVACSDDEGKDKDQSSNKDQTTQKDKKADQ
                     DKQKDNKAKDSKEKDNKAKDTQSNDNGASSSDVNQGTNDGQSTTESQQNQNQADQGQS
                     STQDQQNNATNGNGNGQNQTSQSSSQSQPKYVAPYQGQNVTPVAQNIVRQEVDRQQAL
                     RHLPNFQTSLDSAQAEVNRLNGQNNPYNDYALQGDGNRYSYMFSFINQSQPGTYTIVT
                     VDGTGHAKIVDPAYRQ"
BASE COUNT         7321 a         4121 c         4668 g         7170 t
ORIGIN      
        1 gtgatttggc aatattttac tattcaatta tgataaaaaa tgtgttttga ttattgtttc
       61 taaaataata ggtaactctt caaaggcact ctgttgatgt acgcgctcgg tcactttatg
      121 ggcgtcttta ccgataggac cacagttcaa aaatggtgct tgaatccgtt caatcgcttc
      181 aaacggaata tgatatgtct ggccaaatac aggtgtgtga tcgcgaaatg cgtcaaatcc
      241 tgaaccattt ggagatggtg caacgtaact taaatcacta ataccattaa aataatgaat
      301 gcgttctgac acacgattga attgttgctt ggcagtgtct gtaatcgttt gtttaattgc
      361 ttcaactaaa gggtgaaacg atgcattcgt tgctggataa tacggtggtg caaagaatgt
      421 aacaacgaca gggccaagtg atttacaaag gcgaataagc gcatcaataa tcaaaataga
      481 ctgtgcatgg ggctcttgtt cgttttgaat ggcttggtca accctgtctt gaactgcgcg
      541 ctcaccatga tgttgacatg catattgata caactcttga taagtcagca actgcaactg
      601 aggtagcggt gcgacgtctt catctttcat tcgttgttgg taagccgccc aagctttatg
      661 catgccttct ttgaccgccg cattaaattg ttggaaaaca tcatttgcgt tctgtttaaa
      721 taagaaaaga ttaaatagag cgactgtacg aaatggcgtt tggacatcgt aatgatgctt
      781 aacatcattc atttttaatg tgacagggaa gggcgtcgac tcaccttcaa atgtctcttt
      841 aaaacgagcg ctatattcaa tttcttgaag gatataactc atcataaaat tcgaacttaa
      901 accgagtgcg ggtgtaccga catgggtttc acgaccattc acaaaaacgc ctggcataat
      961 tttgccaatc gacccgctat aaaaataatg gatgtcattg ccttgttgtt gaaatgtcgg
     1021 ctcactattt aaatgtaaga cgatatcgag ttgatgttgc tgacaaagtt catctaagtg
     1081 tgccactgcg gcatgcattc cttttgaagt gacttcttcg tcaggtacag tcatcaaaat
     1141 gaggttgata tcccattgtt cgatgatggc tttttcaatg agtgacatat gtaacatgag
     1201 gccgggtttc atatccatac tgccgcgacc aaataaatat tgaccggact gaatatcgac
     1261 ttgaacttct ttatcaaaat cctcaacatg tccttgaaaa gttgctgtga ggcgatccat
     1321 atcaaaagct tcagattggt ataaaccaaa atcttcaata cccactgtat caaaatgact
     1381 gatacatgtg acggctttgt gagaggtagc gccaagatat aaagcaacta ccgcatgtcg
     1441 accatcgtca gtcggtacga gatggatctg ttcagggtgt gctttgaaat aatcaagaga
     1501 catcaattga tctttcacta aataaggaaa cgattgttca ccttctgaat gtgtcacact
     1561 ttgatgtgca acgagttgtt ttaacagtaa tgctcttcct gctgctgttt gccaatgtgt
     1621 tttcatacta tcttctcctt tgtgtactgt ttccagcata caatctcatt gtaagtgttt
     1681 tcatagcatt tgccaatgac atccaatgac tttatgacgt ttgtgtgacg gaggaagttc
     1741 tcttagatgt ctcaaactga tttgtgttaa tatagtaaaa taagatagta caaagtgggg
     1801 gcatatgaca tgttaaaaaa aataatcggt attattttgt cactcatcgt tatatttatc
     1861 gttgttgccg gtgcattttt tgcgtttaaa gggtaccaga aaagccaaaa tttaaagatg
     1921 attgatcaat atttaactga aaatcatttg aaagataaag tcattgagga aaaagatgag
     1981 tacgacccga gaaaagggat tttttataaa gagttaacga ttaaaggcga tgaaaaaaat
     2041 acatacatcg cacagccgat ccatatgaaa cgtggatttt tcttacaagg ctttaataca
     2101 gaaacgaaaa agcatgataa aaacgcgaaa tatagtttct ttgatgaaga ttataagttg
     2161 aaataactgt ttcttaatta ggaaatacga gcttgaaagt tttacgaatg cggacatgtt
     2221 cttgcttgat gatgtggata agatgatgaa gaaaagactc ggacgaattg atgttccgag
     2281 tctttttatg caaaggcaat gatacagccc ttatatgaag tgtgattctc atgctacttt
     2341 acagattctg ctgttgcgat ggcttgttga atatagtcca ctgattgatc gagtgctgtt
     2401 ttttcctctg catctaattg aattgggaat atttcatggt ggccatcgcg attcacacgt
     2461 gtcggcaagc taaaggccac attcgtataa tcatatacat tttgatggac agttgaaatc
     2521 ggtaaaatac gattctcatc ataaaaaata gcttctgcta aatcgacagc aacgcgtgaa
     2581 atggctgaat ttgtccaacc ttttttacgc atgacatcaa aagaaacttt atcgatttga
     2641 tcacgaatgc cttgtttcga aatcggtgtc gccccgttca attgttcata ttcttctaac
     2701 gacatgccgg caatacggac acgactccat acaggcacag tcgttttacc gtgctcccca
     2761 atcacaaaag cttcgacatt ttttggatca acttgataat gattggcaat caatgtgcga
     2821 aaacgtgtcg actctaacat cgtgcctgtt cccataatct tgtgatgtgg gtagttaaat
     2881 tgtacttcag caatataagt catcgtatct actggatttg aaatcatcat aatatgcgga
     2941 gatgtcgtaa ctgcagtaat ctgggccatt atctcttgga tgattttcgt attgtatgct
     3001 gtcagtttcg tacgatccgc catatctgcg tttgaaggaa tgctggcaga aataatgatt
     3061 aaatcaacgt ctgctaacat ctcgtatgta ccgactttaa tacgtgtatg atgtgtcccg
     3121 cttaaccctt gaaaatgctc atgatcgagc gcttcacctt ctatacggtc acgatctgta
     3181 tcaattaaaa tgatttcttg aaacagacct gcatactgaa tatctgttaa aatctgactc
     3241 cctacgcgtc ctaaaccgat gagtgcgact ttattgatca ttctaaaccc tccttgaagt
     3301 tgtatcaaaa tatatcatta gattgactca agtatacata atattagtat aaactttgtg
     3361 aaagacaaga tgcaatgacc aagcaattca tcagcaagta catttttcag aatttttggt
     3421 atgataatta ggacacatcc tataaagggg gacaatgaat aatgaaagat acaaaagcat
     3481 tactccaaca attaacagac cttaacggga ttgctggaca tgagtataat attaaaaaga
     3541 tgatgaacga ccttttagaa ccaaatagcg acgaaatgat ctatgacaat ttaggaggtg
     3601 ttttcggtaa aaaatattcc aaaacaggtc aacgtacaat tatgattgcc ggtcatctgg
     3661 atgagattgg ctttatgata acgaaaatag atgataatgg ctttattcgt tttacacaag
     3721 ttggaagttg gtggaatcaa gtcatgttat cgcaaaaggt aacaattacg acagatgaag
     3781 gtcggcaaat tcgcggcatt atcggttcaa agccacccca tgtactcaca cctgaagaac
     3841 gtaaacgccc agtcgagatg aaacatatgt ttatcgatgt cggtgcaaaa gataaagctg
     3901 aagttgaagc ggcaggcatt gaaattggca atatgattac accatattct gaatttgaga
     3961 cgttattaaa tgaggattac atgaccgcga aagcatttga taaccgcttt ggttgtgcag
     4021 ttgcagtcga cgtgatggac gagcttaaag atgaggatat caatgtgaat ttagttgcag
     4081 gtgcgaatgt acaagaagag gtggggctac gtggtgcaaa agtggctgct cacaaagtaa
     4141 aacctgattt agccattgcg gtagacgtcg gtgtcgcgta tgatacacca ggtttagaaa
     4201 gtaatggaga cactaaagta ggcaatggtc caattgtgtt aaatttagat gccacaaata
     4261 ttggtcatgt cgggttaatt cgtcacgtga aaaatgtagc taaagcgaat ggtatcgact
     4321 tgcaatggga ttctattcca ggtggcggga cagatgctgg aagtttccat acagcgttag
     4381 acggtattcc ttctattgca ttgtcactgc cattacgtta catgcattca aacgtatcga
     4441 tactgagtcg caaagattat caagccgtcg ttaagttagt cactgaaatt attcgtgcgt
     4501 taaatgatga agtgattgac gaaatcattt ggtaaaatat ttaaaaccac aatttaagca
     4561 gaattccact tgttcaacta agcagtggtg ttctgctttt tatgtagagc gataaaagta
     4621 atgtgaaaga agcaaaaaga tattgtcttc acgtgtgagt catgatagat tagacaaaaa
     4681 tataaagaca acagaggagt ctttccatga cacaacaaca tcaaaaaagg tggttaggtt
     4741 atttattagt tatcattggc gcttcatttt gggggatagg tggaacagtc tcacaatggc
     4801 tttttcaaca tgcaaatgtc gatgttacat ggtttgtagc cgtgcgactc atgctctcag
     4861 ggctgttatt actcggcatt gcttttattt cagaaggtcc gaaagtcttc cacatctggc
     4921 gtgataaacg atccacagca caaattttaa tttacggctt attcggtatg cttaccgtac
     4981 aatatacctt tatggttact atcagctatg ggaatgcggc ggtcgcgaca ttattacaat
     5041 atcttggtct tattttcatt attttttatc tcgttttcag gaaagttaca aaaataggtg
     5101 tgaaggaaat tgtagcggta ttgcttgcat taaccggtac atttttatta ctgactaacg
     5161 gtaatatact gaatctacaa gtccctaaat taacgattgt atgggggtta ctgtcagcca
     5221 tcgcgcttgc tttttatacc atttatccag tgaagttatt agcacgatgg agttcactga
     5281 ctgtcgtcgg ttgggcaatg tttatcggag gctgtgcatt aagcatcgtg catccgccat
     5341 ggcaaatgga ctttactact tggacgttac cgacttatct ttattttgga tttgccatta
     5401 tttttggaac gatgctcgca ttttggtttt atatcgatag cttgcgatat ttacatccac
     5461 atgaatcagg attattaggc acacttgaac cattaacagc actcttgaca tctgttgttt
     5521 ggttacacac tacgttcgga gtgtggcaac tggttggtgt tgcttgcatc ataatgatgg
     5581 tcgtcatcat ctccgtcgtc caaaacaaat aacgacatca tacaggttga ggaataaaaa
     5641 aacagattgc ataacaaccc aggaagtcta acaaaaaaga ttacagaacg aagctgacgt
     5701 cctaaaaagc cttattgaat agcaacctgg gcgagactcc tgaggcatag agacgagacc
     5761 gaaaatccac caacgcatct accaatgtaa catttcaatc aagcgttggt tagttgagga
     5821 gaggcgccta ggaacgcgag cccaaaagtg caatcaataa ggcgaatata taaatataaa
     5881 gcttcgttct gtaatctata agataatgcg ctttcaattt agaacgagaa gataagaaat
     5941 gtttctcaat tctttaagtc aacatactaa tgcatgtcgt gaattttcat catcaaccca
     6001 tgtggcacat catcatgtga cacaatcttt ttcttaatat atacatgtgg ttcatctttt
     6061 ttcgccacaa gcttcacaaa atcacctttc tcaggtctga agtcatcatc ggttggaatc
     6121 ttcacatttg tttctacggt tttctcagac tcactcacca ctttttcagc agtcgtgtca
     6181 tctttcatat aaccgtaata agtttccttt tgtcctgcaa gcatcatcgc cacaactacg
     6241 cctactgtaa cgactaacat cgccacaatc aacacgatac ctatcgtttg tttttctttc
     6301 attgatgtgt ctcctttgga aaatttaatt gcgacttcat aataagtcac ttcttattgt
     6361 atcgaaagaa aatactttcg aaaagcaaaa tatttaatgt acatacgatg ttaagcgata
     6421 gactttgttg tctatattat gtgcacagtg aacaagtata tgaaaatttg tacgaaagat
     6481 tacgtagaga atcttcaatt ttttcgcgag tcgtgaatgg cgttgtggta tagtatctat
     6541 attaaaaatt atcgcttcca tgaggcaaga ggtggaggga caacaatgtc tgagttcaat
     6601 ggacatcaaa aaattcaaga tcaatggcta ctcgtcttcg gtattatttt aattgcggcc
     6661 acgttacgcg cgccactcac agccgtagga ccagtcatcc aacaagttaa aacagattta
     6721 catattaaca atgggattgc aggtttgatt acgaccattc cactcattat ttttggtgtg
     6781 gtatcgccat ttgtatcgcg tatgctttca aaaatttcga tgtcacgctt tttattttta
     6841 actttaatgt taacgatggt cgcactgctt attcgaattt tgggagggat actaacattt
     6901 ttcatcggaa cagtgttact cggtgtatcg attgcactag ccaatgtcac gttgccggct
     6961 tatgcgaaat gggctttccc gacacaaatt ggtttaatta caggaattta tagtgcgacg
     7021 atgaacttta cagctgggtt gggtggggga ttaagttacc cactgtctac tgttacatcg
     7081 ttatcatatc gcttttcact cgtgttttgg gtcgcttttg cagtggtagc attcgtaata
     7141 tggttgcctc aactgaaaca agcgtcttat ttagcttcac aacaacatga gggattgaga
     7201 aagccgattt attgttcaaa aattgcatgg gcggtggcac tcacgatggc attccaatct
     7261 atgatgtttt atagtatcgt cgcttggtat ccgtcaatat tagtgagtaa aggcattgaa
     7321 ccggaaatgg cgggatactt tttaatgttg aatcaatttt cgcaattacc gatgacgttt
     7381 acatttccga ttattgccgc aaagatgtcg acacaaagaa gtttgatcag tatagttgca
     7441 gcgctgatga gtgtagggtt tatgttgctg tttttcaaca atacgtggat attacttatg
     7501 gcgatgattt taactggtat gggcattggc gcatgcttta gtttatgtat gacgatgttt
     7561 tcgattcgtt caaaaacaac agccggcagt atggctttat caggttttgg tcagtcggtc
     7621 ggttattgga tcgcggcgat agggcctttt ctacttggta tggcacatga tttgttgaat
     7681 aattggacgg tcactattgt gttgttttta atgatggtcg tagctgtatt tagtgcaggt
     7741 atgattgccg cgcaaaataa atatattgaa gatgaataag tgataaaagt aagggttaag
     7801 acgaggtatg caccttgtcc taacccttat tttggatgac gttcaaacgc tcaccagcaa
     7861 acgattacaa tatatctgat tgttgctgtg cttgactttt cgtaatatga atcaatttga
     7921 tgtggccaac aggcagtgtt gtttgataac gtgacttacc aaaatgatgg agctgaacat
     7981 gaaataacaa ttgattcgct gcatgaatgg ttgagataaa ctgtggaggt aagtaataac
     8041 cttctgcgtt ttttgcaagg atgtcatcga tgttactgta ttttggatga tacgtatatt
     8101 ctgccactaa atgttgatgt aactctaaag taccgtatag ctcatacgtc aaatcctttt
     8161 ggtcgttttg gacttgatac gggtgaaata acaatatatc ataggccaat cgcgattcgt
     8221 gaacgacata ggaacgttcc acgacactat gcgaatgatt gaaaggttgc attaaatgaa
     8281 atacgtgttg tagcgcggtt tgatggccca gtctatcgaa ataaccgtgc atttctggct
     8341 gatgacagat gagcggtaaa gttaaacctt ggacggtatg atgcatattt aaccaaattt
     8401 ccaaccattc tctcgggtgt actttctctt ctttttgcgc atataaccat tcattgacac
     8461 cggataataa aataggacgt tgattcaagt tgtaatcttc tagccaatct ttaagttggc
     8521 gatggaaagg atgtgtcagt tgtaatgatg aagatgtgga ttgcgcagta ctgttcacca
     8581 atgacatatc caccatatag taatcaaaat ctgtatcaag ttgtaacgtt cgttgtggca
     8641 tcggtatgta aatgagtaaa gtgaattggc aactttcgag taatgtcttc atctcttgaa
     8701 tgatgaattt gatgtcacgt gctaaaagtg ttgcatcatc taatacgaga ttgaaataca
     8761 actgtgacat atcaaaatca atagcagatt gacgtagcac ttgtaataac ggttgtaaaa
     8821 agtgcaattt aaacttttca taactttgca tagatgagat acgataagca atgccatatt
     8881 gatggtggta cactaactgg cttaaacatt tgacctcatc caagttatca aacgtgatat
     8941 tcccccatga tgttgcgttg aagtacagtg tgataggagt cgctttttga tacgtttgca
     9001 catgcggagt tggatggaat atctgcatca tttcacgcat atgttgtact tcaaggagta
     9061 accgtttaga tggtagccag cgcgtttgtt gggattgatt taaataaatg cttaacggct
     9121 ggtttgcatt aaatttttca agaacatcga gtaaatgacc ttcaaaatat tgatcatcaa
     9181 acggttgaat atcgacttga atgacttgct tttgatgttg ctttcgaaac gcaatcggac
     9241 tgacgccaat aaaacgttta aattgtttag aataatgatt gtaactacta aattgatagt
     9301 ataatgcaat ctgattaatc gattcattcg tgtgcagtaa gtgatacatg gataagccaa
     9361 ttttcagtga aacaaaatac tttttgaacg tataatttaa atatctgtta aacaatgttg
     9421 agatgtatga ttcggtaaca aaaaagtgct cacttaactc tggcaaagat aatcgagaaa
     9481 ggggtctttg atgaacataa tccatgatgt tattaaataa gatgcttttc acttgaaccc
     9541 gtggcacatg aactgcccct gtatcgataa aacattcatt gactaacatt tcgataatcg
     9601 gtttgaagca ttcgaaatat tggtccgtgt tattttcggt aatcactttt tttatttgtg
     9661 tggtgattat attgtgagat gataactttt cttgattgaa aaaacctaat aaataatgtg
     9721 gctgatattc tgagaagtag tgtaatggaa tagagatttt tgcaacagct tgtgcatctt
     9781 taactttaac gatgtcatta tggttaatga ttgcaacttg atgataaaaa tgactctttt
     9841 taccgttgag ctcgagtgtc aggacgcctt caaatgaaac gaataattcg atacgattaa
     9901 atacacgata tgcactagat gtgtactgtt tcattaattc aatagtgatg ccttgcataa
     9961 tggacctctc tcaaattcag tatttttcaa cagcattgaa atgacttaat aaatcaacat
    10021 tattatagaa ttattgattg ttagaccaca atatgatttg caatattgtg aaaagaaaga
    10081 cttaaagtga aaagataatg acatattaaa ggttttaaaa agagtataga aaacaatatt
    10141 ctttaaaaaa agatatatcg cagtgaaaaa acgtggtaaa catttcagaa acggtgttgt
    10201 actatgaaag gtgtttgaaa aatttaaagc tcaaaaatag aatatgaaac acttgggaga
    10261 gaaagtaaca ccaatagctg acaggttttg aagtaacatc actataacat attcttaaca
    10321 aagcgacacc cttgattgct acatcgttaa acagaagtga caaagaattt tgaataggta
    10381 ttgattatcc atttgaaaac gaatacaatg aagataatct ttttttggta ccggttccaa
    10441 aaaagtttcg aaagcattga ataggtcatt ttggagcctt gcattgtttt tgaaacgtat
    10501 ttaagcatgc aagacaactg aaggagtgat gttatggcct atcaaaaaga agcagcaacg
    10561 attttaaaag cagtgggtgg agaagaaaat attgaagaaa tggcgcattg tgcaacccgt
    10621 ttacgcttca cattgaaaga tgaaggcaaa gtagatgagg aaacactcag tcaaatagac
    10681 gttgttaaag ggacattttc tacaagtgat caatatcaaa ttattatcgg ttcaggtacc
    10741 gtcaataaag tatttcaagc ggtgcagact ttaatgaaag gtgatactga cgaacatacc
    10801 catcaagaga ataacaaaca gaagaaaaag gggcatccgt tacaacgttt tgtgaagatg
    10861 ttgtctgaca tcttcgttcc aattattccg gcaattgttg cgggcggttt gttaatggga
    10921 ctgaacaata ttttgacagc aaaagggatt tttagtgaat cacaatctgt tgtcgaaatg
    10981 tatccgcatt ttgctgaatt tgcaagtatg atcaatattt ttgcaagtgc accgtttgcg
    11041 ttgttaccta ttttaattgg attcagtgcg gcgaaacgct ttggaggcaa tgcattttta
    11101 ggtgctgcat tgggggcaat tatggttcac cctgcgctaa tgaacggtta tgcatatcca
    11161 gaagcactaa caaatggtga tccaatcccg agatggcaca tattaggttt atccatcgcg
    11221 caagtgggtt accaaggaca agtgttacct acattagttg cgacatacat tttagcacag
    11281 ttggaaaaag ggttacgtcg tgttgtaccg actgtattag ataatttact tacaccatta
    11341 tttgctatac tcattaccgc atttttgaca tttttatttg taggaccatt gacacgtaca
    11401 gcaggttttt ggcttacaga tggcttaaca tggctttatg aaacaggggg cgctgttggt
    11461 ggattcctct tcggactgtt ctatgcacca atcgttatta cagggatgca ccacagtttt
    11521 attgctattg aaacagcact catagcagat tcagcaaaaa cgggtggctc tttcattttc
    11581 ccaatcgctg caatgtcgaa tatggcgcaa ggtgccgctg cattggccgc atttttctta
    11641 attaaacaaa atcaaaaatt gaaaggtgtc gcttcagcag ccggtgtatc agcagtgtta
    11701 gggattacgg aacccgctat gtttggggtc aatctgaagt tgcgttatcc atttatcgga
    11761 gcaatgacag gatcagcttt aggttcagca tatgtttcat tctttaaagt gaaagcaacg
    11821 gcattaggag cagcgggcat tcctggtgtc atttcaatcg caccaggttc atggacacat
    11881 tatattatag gcatgtgtat cgccttcatt ggtagctttg ttatcacatt aatcttatcg
    11941 aaacagaaaa agtatcaggg cttagcagaa taaaacaaaa cgtgagaatt aagaggataa
    12001 atattaatta tatgaaagac tgggatagct gcattgcgtc ccagtctttt gacatcattg
    12061 aggatacgca tctatcatta aaaaatacga taactaagaa aagcactgtt aattgtatga
    12121 gttaagcgtg tgaattttat catgttagta cgagtttatt atgagaatga tgattttaaa
    12181 gcgtattgaa aaacgattct aatatgaaaa taaaagcctt gactgacgag attgcaaaat
    12241 agggcgaaac gacttagaac caaagacagt ggtatttgtg gcatatagta atgacaaaag
    12301 ctttgatatt ggctaaaagg ttagtgtgaa aagtacttgg aatacaaggg tgtaagaacc
    12361 atccgagacg cctgagggat aaaatgaaca actaaataag atttctactg tttaacgcaa
    12421 tagctgtctg acttctccat gtagacactt ttgagaagtc tagtcagcca tatggagggc
    12481 agtacgacga catctttgtt gtacataaga tttctgtact actcccaaaa cacaatttgg
    12541 cttctatcaa atgaatattt taattaagcc aaatttcgtt gaggtaagcc gactagaaat
    12601 gcgagggatg gcccaaacct caaactaaaa ccttgtgatt tcatacatca aacggccccc
    12661 aacctatcgt caaagcttat cattccgcca taaaaagaca aacaatacaa caacaagcac
    12721 cacagaaagc acaataataa tcaaccacga caggccactt tctgtatcaa tcggcaatgg
    12781 cacattcatc ccaaaaaagc taaacaccaa agtcggcaac gttaacaaca ctgtaaaaat
    12841 cgtcaacgtc ttcatcgtcg tattcaactg attcgaaagc aatgacgcat aggaattcga
    12901 catactttct acaatacgta aataaagctc agtcgtttct accgcttgtt ggtgctcatt
    12961 tttcaagtct tccaacaatt cttcatcatc atcaaaccgt ttaattgctg gcaaacggaa
    13021 caaatgacga atcgttgagg agttggtttt taatgaacct aaaaagtaaa cgagactttt
    13081 ttcaatttca cttaataaaa ataaacgttg gttcgttacg cgctgttgta aattatactc
    13141 cacttgacga cgctctttat tgagtaagcg taaacttcta ttatattgtg ctgccatatc
    13201 atacatgact tttaaggcaa attgactttt atacttcaag ttaatcggct tttgaattaa
    13261 gtgatcaaaa taatgaaatg attttgcaca aaccgtcaca ataatatctt tgccgataat
    13321 gatacctaac ggcaatgttg taaaactttt aagcttgtat tggcctgatt ttgtaatagg
    13381 gaagtcacta ataattaatg aatagccgct atcgtcatca tattcaatac gtgaactttc
    13441 ttcgctatct aaagcatctt caaggaaatc ttgaggaaaa gcatacatat caatgagacg
    13501 ttgtatttca gcttgagtcg gtttgacgac attaagccat tgtgcatgtt cccagtcttc
    13561 actttctact acacggaggt ccgcgtcatt acgataggca cgaatcatgt tgcgtcacct
    13621 tcttctatat cttgttttaa atgtctgatg tctttgtagc cttgtctata ggaggcaaaa
    13681 ccttccataa tcgcatacca atcttcgcca aactcagact taattcgatt aaataaatca
    13741 ctttgtgcgc gatttaactt tttgataagt gctttacctt ctgacgttgg ataaagtcgc
    13801 tttaaacgac gatccgttaa atcaggctca tcataaatta aaccttttgc ttttaataat
    13861 ttgagtgtcg catgtgagcc ttgttttgaa atttctagat tctccaataa ttttttagtc
    13921 gtaatgcctg gcaatttgtt aataaaaaag agaaagcgat ggtgttgacg actcatatca
    13981 tattcagcga tgagatcatc ggctgtttta gtaaatgttt gataagcgta ataaaaaaga
    14041 aacagttcat aatcattatt ttgagtcata gtaaacttcc ttttctgaaa agtctttttc
    14101 attatagtaa agaattttac atctgtcatg gatatgttga tgaaatttga aggattgttc
    14161 acacatggat ctatgagaag gtgaaccatg ctgtagatct acacatgcca atgtgaattt
    14221 tgtaatgtga atgttaagcg tttaatgtga cataaataac acaaaatttg aaatgtgacg
    14281 ttaaatttgt agttactttt taggaaaatc atgaatttaa atcgaatctt catgaaatct
    14341 taacattaaa tttacaaaga taagagataa tcagagtgaa tcatacttgg atagtatggc
    14401 taagatattg aaaaataacc tatttcatgt ctttttttgg tgttttttac aaactttata
    14461 ttgaggtgga aaaatggaaa tgtcggtaac tgaagtcatc ttttcgtttt taggtggctt
    14521 gggtatcttc ctgtatggtt taaaaataat gggggatggt cttcaagctt ctgctggaga
    14581 tcgtttgcgt aacattttaa ataaatatac ctctaaccca gtacttggtg tgttagcagg
    14641 tatgattgtg acaatattaa ttcaaagtag tacaggtacg acggtcatca caattggttt
    14701 ggtaacagct ggatttatga cattgaaaca agcaattggt gtcattatgg gtgccaacat
    14761 tgggacgacg gtgaccgcgt ttattatcgg tattgattta ggggagtatg cgatgccgat
    14821 tttagcatta ggtgcgtttc ttatcttctt tttcaaacgt tcaaaaatta ataatattgg
    14881 gcgtgtttta tttggtttcg gatcactctt tttcggtctt gagtttatgg gaggtgcagt
    14941 gaaaccatta gctgaattgg aaggctttag acagttgatg ctcgatatgt cctcacatac
    15001 gatttatggt attttagttg gaataggttt aacggcgctt gtgcaaagtt cgagtgcgac
    15061 aattgggatt ttacaagaat tttatagtca agatttaatc actttacaag gtgcgattcc
    15121 ggtcctgtta ggtgataata tcggaacgac cattacagca atattagcaa gtttggcagg
    15181 ctcactagct gcaaaacgag cggcatttgt tcatgtcatt tttaatgtca tcggtgtgat
    15241 catttttacg ttattattac ctatcgtcat cccactgata gcgacaattc aagacgcatg
    15301 gcatttaaaa ccagtgatga cgattgcctt tgcacacggc gcctttaacg tgacgaacac
    15361 attaattcaa ttgccatttg ttggtgtttt agcttggatt gtcacgaaaa ttgtgccagg
    15421 taaagatgtc acagaagatt ataaaccgca acatttaaac aaagatttag tgtatcatgc
    15481 accgggtgtt gcgttacaag agacacaaaa agagctacaa aatgttggga atatcgtacg
    15541 ctctatgctt gatgatgtgc accatccgtc tcaaatggat aaaaaaatga ttaaaaatgt
    15601 gcaacaaaaa catcaagctg tcgtaacgat tagtgatagt atacgtaatt atctcgtacg
    15661 tatttcgact aaaaatatta ctcgaaaaga tgttgaacga ttggctgtca tgtttgatgt
    15721 aaatcgctcc attttaaaag tatccgaatt aatcgaagca tatattgaac aagtgaaccg
    15781 taaaaaagcg aaagagatta ctttaacaga agatgctgag cgtggcattg ataaactgta
    15841 tcgctttgta gatgaatcat ttacgaaagc cattgaaaca ttggatgtat acgatacaac
    15901 gaagaaggat gaagtggtcg agcggagtcg tgaagcattt aacattgaac atcaacttcg
    15961 taaaggtcat attaaacgtt tgaatcgtgg tgaatgttcg actgacggtg gcctgctcta
    16021 tgtagatatt attgccgtat tagagcgtat cggttataac tcacgtaata tttctgaagc
    16081 catggttggt ttaaatgaag atgtatccac tgaagaagaa gttgtgaatg tatagtttgt
    16141 tttgaattga atgaggtgta gtgtttgtat cttgatcaga cactacgcct ttttaattga
    16201 aaagtgaaag caaaatataa cttgagaaaa atgagggaat ttcattaaaa actatcaaaa
    16261 taaatagtca ttgttacaat gttctgtcaa aagaataatg ttaagtaaca aatatttgaa
    16321 aaacaaacaa aatgattgtg ttcactttaa cttttgataa tcttttaaag atgacaaatt
    16381 tttgattttg tatatactgt attgatttga aaggggtgaa cgtatgcaca ggtggtgatg
    16441 tggacacaag aagacgaaga tagtgaaaac cttgcaccat tgacagaact taaaacaggt
    16501 ggtgcaacaa cgaatagtgg agaagcgggg gcaacaacag ctgtatcgcc atggttatgg
    16561 gtgatcagta ttgctgcttt aattgtagcg ctcgtcgcat tgtttaaacg acgaaacttt
    16621 acgaaatctg acaaataatt gttattgaca tgatgtctat gtttaccgct ataatcagta
    16681 gtatagaaga tgagggttca acatttttgc cttccattta ttaggatttt atggatgata
    16741 catcaactag tttgaaaaag aagggaacgt caatttccgt attgcattaa ctcatgacaa
    16801 caagtttgag cattaacgga attaaaacaa tggagcgtga aaacaatgag acgtatttta
    16861 tatgcattta tgacttatac cgtgttggga ctattgagtg ggtttgctta cagagaatta
    16921 acagtacatt atgaatttac gggttctacc caaatgagtg tcatgcatac acacttatta
    16981 acgctcggta tgtttatgtt tttaatactg attccgatag aaaaattatt caaaatcagc
    17041 agctactatt tatttaactg gtattttatt atttacaata ttggtgtgtt gacgacagtg
    17101 tcaatgcagt ttatgaaagg gtttaagcag atttcaggtg gtaccattcc agcgtcgttt
    17161 gcaggatttg ccggtattgg gcatgtaacg ataacggctg gatttattct gttatttttc
    17221 ttattacgac aagccattct agtgtcacca cgagatggcg ctgttgccaa agatgaagtg
    17281 aaagacgaaa cacccgttga ataaaacgat gaaaacaaaa aaccattcag tgcgctatct
    17341 aaaatttaga cacagtgctg agtggctttt ttttgtacat gttacttttc aacgggatag
    17401 tggcggtaca tcccacctga acgcggttct gttgagataa aaccgaattg tgcataaagt
    17461 tggtcggcag ggtaatcagc gataagactg acgtatgtac cgggttgacg cacggactct
    17521 atgtaatcca ttatctgttg cataatcact ttgccgtgac cttgaccttg gtatttcgga
    17581 cgtactgcaa catcgataat ttgaaatgcg gtggcgccgt ctccaatgac acgtcccata
    17641 ccgatcagtt gatggtcgtc ataaatcgta actgtaaaac acgcattcgg caacccaacg
    17701 cgggcagcag cttctgattt tgcacttagc cccgtgatac gacgtagttc acaatagtcg
    17761 gctggggtcg gaatttcata ttttacttca gttgtcatga cataacgttc ctttcaatct
    17821 agtgtggtaa aaattgacga ttggcttctt taaagacatc attgtgactc gatacgtagc
    17881 cttcttttgg tgctgaagga tcaatgtatt gttttgcact gtttgccgca tgagccgcat
    17941 cgctgaaagc actcgcgatt aaatgtactt ttgcgggatg ttggacaata tcgccacaag
    18001 cataaatccc tggcactgaa gtacatgtgt ttttctcacc atacacataa tcgtcgttca
    18061 cagtttgaat tgtaacatct gaatcgttta aaagtgtcag ttcacgttcg aagccatgac
    18121 taataataac ctcatctaca cgatggatgg ttgtttcccc cgtttcacca ttttcaagga
    18181 cgacttcgtt aattttgttc gcatcatccg cagtactctt caattgtaca attttgctat
    18241 tcggaaactt ttggacattt aatgaatcca aaatgttttg catcgcttcg tgaccagaaa
    18301 tatctttttt gcgataaacg agtttcacac ttttcgcata accggataaa tcacgtgccc
    18361 aatctaacgc agaattgcct gctcctgaaa taagaacgtc tttatttttg aatttttgat
    18421 attgttgcac gacataatgt aagtttgtca gttcaaatcg ttctgcacct tcaattttaa
    18481 gtggtaacgg tttgatgata cccgcaccta tcgcaagaat gattgcacgt gacgttaaag
    18541 actgaccgtc agctgtaatg atttcaaaat gatgttcatc atgtttgata atatttgtga
    18601 ctttcgtttc gagcaaaact tcagggttaa aatgaaggcc ttgttgaata atatttttta
    18661 agatgtcata acaggattga ggtgcaacac cgccaatgtc ccaaatgatt ttttcgggat
    18721 aaatttgcat tttgccacct aattcgcgtt gaacatctac aatgcgtacg tccatccctc
    18781 taaggcttgc ataaaaactc gcatataaac ctgccgggcc accaccgata attgttacat
    18841 ctttcatttt tttacgctcc ctcaagttaa tttgatgctt tctattatca tataaatgag
    18901 aataattatc aattgaagtg ccgtaaatgt caaaaatata tacatagcaa aattgtggtt
    18961 gatagggtat ataatcaata aaaaacagcc aataagcatg acggttcata cttattgact
    19021 gtatcactat attttattcg acatttttcg cattcgtacg tgcacgcaag tcttgttcga
    19081 tttgttcaag actgcgacca cgtgtttcag gcaagaattt tataacgaaa atcattgcga
    19141 tgataccaat gactgcgaag attaagaaga cttgttgaac ttgtaataca tctgtgagta
    19201 ctgggaagaa ttgtgctacg agtaaactac caattgaaag tacgagtgct gcaatacctg
    19261 ttgctgcacc acgcgcacgc attgggaata attctggtaa cattacccat aatacagggc
    19321 cccatgacac accgaagaaa ataatgaatg ttgttaaaca aagcagaata atccaagcgg
    19381 cactattgac cccgataagc caaattaatg cactcatgat cagtaatgaa gccaccatac
    19441 caatgttacc aatgacaagt aatttttttc ggtcaatttt gtcgataatt gaaattgcga
    19501 aaatagttac aagaacattt acaacaccga tgccaactgt gcttaaaatg gcggttgatt
    19561 caccaaaacc tgctgttgcg aaaattttag gtgcgtagta aataatggca ttaatcccaa
    19621 tcaattgttg gagtaatgca aaaacacttc cgataatgat tgtcgacaac aaccaaggcg
    19681 atttaagaac agtccaagtg ttatcagcaa tttgattgat tttcttcata ttttcgattt
    19741 catgatcgat ttctgaagct gggtaagtta atttcatcac gtcacgcgct gctttttcac
    19801 cacgtttttc aagtaaccaa cgtgggcttt caggcatgaa aataacacca atcatcaaaa
    19861 taacagaagg cactactgct aagccaagca tccaacgcca tccttcaata ggtgcaaatg
    19921 catagttcac aaggtatgat gctaaaatac cgattgtgat cattaattgg ttgagtgaac
    19981 ttaatgagcc acgtgcgtct gtcggtgcaa gctcagacag ataaactgga acaatcgcag
    20041 tagaaccgcc gacagctaac ccgataatga cacgacctaa aactaaaatt tccatcgttg
    20101 gtgcgagcgc taaaattaat gcaccaataa taaagacgat agagatcata aagactaaac
    20161 gacggcgacc taatttttca gataatgggc cacttaaccc ggcaccgaca atcgcgccga
    20221 ccaacatgga tgaaacaaca agcccttcag tatatgcatt aagtgggatg tcatccttta
    20281 aataaagtaa tgcaccggaa ataaccccca tgtcatatcc gtataataaa ccacctaaag
    20341 caccaatgaa gaagatcatc tttttattta ttttcattgt gcaacctcca atatttttct
    20401 gtattcaagt atacgctttc atatggtaat agtaaattat aaaattttgc aagtttaaag
    20461 ttttgtaatc ataaataact cgtctttgca aaatatttgt caactattaa tcatatgctt
    20521 tgatacgaca aagttagact cccattactt tggacgatgt tgcttcaaaa gtgtgacagg
    20581 tatcacattt ctgaagcaac tcatgttata tttttaagct tcaggacgta aatcaaccac
    20641 tatacgacct aaaaagtcat gtttctctgc ttttgctaaa tacgttttca attcactaaa
    20701 agggaccacc gttttaatgt catgcaactt tgcaggtttt aaatctttag aaagacgtcg
    20761 ccataaatgt tgtctacgtt gcattggaaa agcgactgaa tctgcaccta aaagtcggat
    20821 accacgtaaa ataaatggat agactgtact tgtgaattca gcaccactta aattaccgct
    20881 aacggcaact gcaccgtgac gttgaatacg ttttaacact tcagttaaag tttcaccacc
    20941 gacaggatca atcgccgcct gccattctgt tgaagcgagt gctttgtcag tcacttcatc
    21001 aattctagga ataaccgtac gtgcacctaa cgcttttaat tgcgcatgat gttcagtttg
    21061 accagaactt gcgataactt tatagccaat tgcatttaac atcatgaccg acattacgcc
    21121 gacaccacct gtagcaccac ggacgagtac cggaccatta gtacttgtaa ttttattgtc
    21181 ttctaacaat tgaatagaaa tcgctgctgt aaaacctgca gtaccaataa tcattgcctc
    21241 ttctaacgtt aagtcttcag ggagatgaac taaccaatca cctttcacac gtgcgacttc
    21301 actaaaacca ccgtcatgat tcacaccgag gtcataaccc gtggcaatga ctttgtcgcc
    21361 ttctttaaat gacgggtggt ctgaagccat cacgacacca gccaaatcta tgccaggtac
    21421 aatcggataa ttgcgaatga ttttattatt cgattttgta gcgagtacat ctttatagtt
    21481 aatacttgaa taatgtacac gaattgtgac atccccttca gacaaatcat ctaacgtaag
    21541 cttagtgaaa tctgcagaca atgtgtcttc atcatgagtc acgcgaaaag ctttaaatgt
    21601 ttctgtcata tgcatgtgcc tcctcaaatt ttttcgttca cactttacca aaaacgctca
    21661 tgaaagacaa ttagattgct tttgctcgtt gaagtgaagt gtctcatgta caataaaaga
    21721 aaaagcgggg aggcaagacg ttgggatatg aattaagaaa ggtaactgtg acggaggtcg
    21781 ccacgttaca acagataagt aaagatacgt tttatgcggc gtatcgcaat gattatgaac
    21841 aagcattatt tgacagttac tttgcggaag agatgtctat aaagaagtta acggccgaat
    21901 tagaagatcc ggatatgcac tttttctttt tatataacga tgatgtaata gtcggttacg
    21961 tgaaagtgaa tgttggagcg gcgcaaacgg tagcaaaagg gatacagtat gcagaacttc
    22021 aacggattta tttgtatcct gaatatcaag ggcaaggatt gggacaatgg ctatttgatt
    22081 ttgtatgtga ctttgtaaaa aatgaactag gaaagtccaa gctatggtta ggtgtgtggg
    22141 aagagaatcg tccggcactt aacttttatt tgaaacaagg gcttgttaaa acaggtgtac
    22201 acccatttaa gatgggaaaa catatcgacg aagattggat tatggagaaa gatttataaa
    22261 aattatttga aaattttgcc ggaaatgttt agtattcagt gtgaagtgta taaaaaagtg
    22321 ataggttttt tctatatcat ttactgaatg aggaggaagc atcatgaaaa gattattggc
    22381 aagcttgatg attgtaccgt tattgctcgt agcatgttct gacgacgaag gtaaggacaa
    22441 agatcagtcg tcgaacaaag atcaaacaac acaaaaagat aagaaagcag atcaagacaa
    22501 gcaaaaagac aataaagcga aagacagcaa agagaaggac aacaaagcaa aagatacgca
    22561 atctaacgac aacggtgcgt catcatcaga cgtcaaccaa ggtactaatg atgggcaaag
    22621 tacaactgag tcacaacaaa atcaaaatca ggcggatcaa ggacaatctt caacacaaga
    22681 tcagcaaaat aatgcgacaa atggcaacgg aaatggtcaa aatcaaacgt ctcaatcatc
    22741 ttcacaatca caaccgaaat acgtcgcccc atatcaagga caaaatgtga cacctgtagc
    22801 tcaaaatatt gtacgtcaag aagttgaccg tcaacaagca ttgagacatc ttccgaactt
    22861 ccaaacatca ctcgacagtg cacaagcaga agtaaatcga ttaaatggtc aaaacaatcc
    22921 ttataatgac tatgcattac aaggtgatgg taaccgttac agttacatgt ttagttttat
    22981 caaccaatca cagccgggta catatacaat cgtgacagta gatgggactg gtcatgcgaa
    23041 aattgtagac ccagcgtatc gtcaataatg aattttgaac aaaaagggtt aggcacatga
    23101 gcggcttaac ctttttttat tttttcaaca tatgagctga catgtttgtt gcgcttcatg
    23161 aataatgcga tagaatttta gaatttagag atttgatttg atagtgaaaa gtgaaaaata
    23221 aacatatagt ataaaatgaa tgagcatttt ttaactttgc atttttatga tattgaaatc
//
LOCUS       DANHPA010000030        22482 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.030, whole genome shotgun sequence.
ACCESSION   DANHPA010000030 DANHPA010000000
VERSION     DANHPA010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 22482)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22482)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22482
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.030"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..415
                     /locus_tag="PTC28_000960"
     CDS             <1..415
                     /locus_tag="PTC28_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HDK5716260.1"
                     /translation="LFVFGAVLGIIGITLIIISFVTLGDNLSMMLFNVVFASILTLIE
                     WVVLVKFFKKSIAIFDKVVLKDSTSKESGYTSHNDRSHLVGEIAVSYTDLRPSGIIIL
                     NNERIDAVSEGSFISKDMKVAIIEVEGTRVVVREI"
     gene            434..1429
                     /gene="floA"
                     /locus_tag="PTC28_000961"
     CDS             434..1429
                     /gene="floA"
                     /locus_tag="PTC28_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613783.1"
                     /note="flotillin-like protein involved in membrane lipid
                     rafts; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin-like protein FloA"
                     /protein_id="HDK5716261.1"
                     /translation="MLTSGLITFIVIAVLIIVALLILFSFVPVGLWISALAAGVKVGI
                     GTLVGMRLRRVSPRKVIGPLIKAHKAGLHLTTNQLESHYLAGGNVDRVVDANIAAQRA
                     DINLPFERGAAIDLAGRDVLEAVQMSVNPKVIETPFIAGVAMNGIEVKAKARITVRAN
                     ISRLVGGAGEDTIIARVGEGIVSTIGSSEHHTQVLENPDNISKTVLSKGLDSGTAFEI
                     LSIDIADVDISKNIGADLQTEQAIADKNIAQAKAEERRAMAVAQEQEMKARVQEMHAK
                     VVEAEAQVPLALAEALRSGNIGVKDYYNLKNIEADTGMREAINKSTQNNNSTPEQ"
     gene            1443..2051
                     /locus_tag="PTC28_000962"
     CDS             1443..2051
                     /locus_tag="PTC28_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716262.1"
                     /translation="MSIGTIIFIITIAISLFSAVSDKSHEKRQKQNKPHNNKKETAPQ
                     KSGGFLENVQQKLEEFERELSDFDEPNEPSQPQPAQQLKRKKTVRPEPTQFEKQAEAT
                     KPKTQENQKQAIEMQQMLDQHMRELDQQLDKERQKRIAHIERRAKNIIQDNYLSHRTK
                     QFKLKQLLEENNTTAIQQGDLTFSNNEVVNGLIWSEVLNRPK"
     gene            2408..3352
                     /locus_tag="PTC28_000963"
     CDS             2408..3352
                     /locus_tag="PTC28_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HDK5716263.1"
                     /translation="MPELIQIDDINQAQALLGNNDEHIQLIEEAFDVVIHARGQEVAV
                     KGEKVSAVTEAESVLINLLKVIEQGASITVKDVQAAIKMAKNGQIEHLIDLYEEEITK
                     DAFGKTIRAKTMGQRMYIHAMKNNDLVFGIGPAGTGKTFLAVVFAAKALRAGQVKRLV
                     LTRPAVEAGESLGFLPGDLKEKVDPYLRPLYDGLNTVLGTEQTARLIERGVIEIAPLA
                     YMRGRTLEDAFVILDEAQNTTHAQMKMFLTRLGFGSKMVVTGDKTQIDLPRGVKSGLI
                     EAEQRLKNIKGLAIQHLDQADVVRHPLVGQIISRYEED"
     gene            3356..3817
                     /gene="ybeY"
                     /locus_tag="PTC28_000964"
     CDS             3356..3817
                     /gene="ybeY"
                     /locus_tag="PTC28_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HDK5716264.1"
                     /translation="MFTIDFSDHTDQVKDDWYTQIRDVLEFAKNEEGIDEDAELSVTF
                     VDKAEIQEINRDYRQKDKVTDVISFAFEEEEDIFEGMDVPRVLGDIIICTDVAAEQAE
                     QYGHSFERELGFLALHGFLHLLGYDHMTEEDEKVMFGRQKDILNQFGLTRD"
     gene            3817..4164
                     /locus_tag="PTC28_000965"
     CDS             3817..4164
                     /locus_tag="PTC28_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HDK5716265.1"
                     /translation="MFNRFKYAFQGCRTILIKDRNFLYHLIIAFLILILGWALPLSTI
                     EWLFIILAIFLVIITEAINTAIEYVVDLATQDFHIFAKHAKDVAAFSVLLASLFAFIV
                     GCIIFIPKFVSFF"
     gene            4180..4587
                     /gene="cdd"
                     /locus_tag="PTC28_000966"
     CDS             4180..4587
                     /gene="cdd"
                     /locus_tag="PTC28_000966"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HDK5716266.1"
                     /translation="MGYTDKHYTEVRKAQQKAYAPYSQFKVGAYLVTKDGQTFHGANV
                     ENAAYPSCICAERSALVAAISQGYKPGDFESITITVDSPELASPCGPCRQVIHELCDD
                     DMPVYMTNQTGEMREATVAELLPYGFSGKDLNL"
     gene            4584..5480
                     /gene="era"
                     /locus_tag="PTC28_000967"
     CDS             4584..5480
                     /gene="era"
                     /locus_tag="PTC28_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000134760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HDK5716267.1"
                     /translation="MSEYKSGFVTIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNK
                     IQGVMTQQDAQIVFLDTPGIHKPKHKLGDYMMKVAKNTLSEIDAVMFMVNVNEEIGRG
                     DEYIMEMLKTVKTPVFLVLNKIDLVHPDALMPRIEQYQRYMDFAEIIPISALEGHNVD
                     HFINVLKSYLPEGPQYYPDGQISDHPEQFVVSELIREKILQTTSEEIPHAIGVNVERM
                     TQESEDRVHIEAVIYVERDSQKGIVIGKGGKKLKEVGKRARLDIEHLLGSKVYLDLWV
                     KVQKDWRNKSSFIKQMGYVEDE"
     gene            5505..6275
                     /gene="recO"
                     /locus_tag="PTC28_000968"
     CDS             5505..6275
                     /gene="recO"
                     /locus_tag="PTC28_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HDK5716268.1"
                     /translation="MLVKQKGIIIKAVDYGESDKIITILNEHGAKVPLMVRRAKKIKS
                     GLQATTQIFVQGLFIYNQWKGMGTLTSVDVLNLNYELRQDIYAHSYASLCLETIDRAM
                     ETDEINPTMYRLLDFAFDRFQQGVSPQLIANIVMLKCMPRFGFDVDLSKCVMTGETNP
                     AKLTHFSFKFDGIIATEVTHRDPHALPLSNKTIYLTYVLKDLPLDKINALRIQDAIVE
                     EMSKFILLLYKEYAGMYFKSQRLINQLNRLKVTDSTDD"
     gene            complement(6491..7885)
                     /locus_tag="PTC28_000969"
     CDS             complement(6491..7885)
                     /locus_tag="PTC28_000969"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase"
                     /protein_id="HDK5716269.1"
                     /translation="MEKKNMDTIVQLAKHRGFVFPGSEIYGGLANTWDYGPLGVELKN
                     NVKKAWWKKFITQSPYNVGLDAAILMNPKTWEASGHLGNFNDPMIDNKDSKIRYRADK
                     LIEDYMANVKGDENFIADGLSFDEMKRIIDEEGITCPVSGTANWTDIRQFNLMFKTFQ
                     GVTEDSTNEIFLRPETAQGIFVNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFR
                     TREFEQMELEFFCKPGTEIEWQNYWKDFAANWLESLGLAKENTRLRDHDEDELSHYSN
                     ATTDIEYRFPFGWGELWGIASRTDFDLKKHSEHSGEDFSYHDPETNEKYIPYCIEPSL
                     GADRVTLAFLCDAYDEEGVEGSKDARTVLHFHPAIAPYKAAVLPLSKKLSADAIKVYE
                     QLSEDFVVDFDESQSIGKRYRRQDEIGTPYCITFDFDSLEDQQVTVRDRDTMEQVRMP
                     ISELNAFLAEKVKF"
     gene            8380..9000
                     /locus_tag="PTC28_000970"
     CDS             8380..9000
                     /locus_tag="PTC28_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001797828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDK5716270.1"
                     /translation="MELNSRQEHIVEIVKSDGPITGEKIAEQLNLTRATLRPDLAILT
                     MAGFLEARPRVGYFYSGKSSSQLLTEKFKKYVVKDYQSQPVILKSNVTVYEAICSIFI
                     EDVGTLFIVNEDNELVGVCSRKDLLRASMAGQDIHSMPVNIIMTRMPNIVLLKENDLV
                     LYAARQMIHKEIDSIPIVREKDNGKFEVTGRISKTTITKLFVSLFD"
     gene            9015..9842
                     /locus_tag="PTC28_000971"
     CDS             9015..9842
                     /locus_tag="PTC28_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase/pyrophosphorylase"
                     /protein_id="HDK5716271.1"
                     /translation="MTNVKIIIASDSVGETAELVAKACMSQFNYSDCSNHILRYPYIE
                     TKENIDEVIAVAREVESIIIYTLVKPDIRAHIQENIDKYGLKSVDVMGPMLNVMEDTF
                     HKKPLNEPGVVHKLDEDYFKKIEAMEFAVKYDDCKDPKGLPKADIVLIGISRTSKTPI
                     SQYLAHKRYKVMNVPIVPEVTPPESLFEVDPKKCVALKISSDKLNAIRKERLKQLGLS
                     DSARYATDQRIAEELAYFNQIVERIGCPVLDVSNKAIEETANNIIQIIEHNHSFTSE"
     gene            9915..11702
                     /locus_tag="PTC28_000972"
     CDS             9915..11702
                     /locus_tag="PTC28_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDK5716272.1"
                     /translation="MRIPQNTIEEIKQQSDILDIVSEYVKLEKRGRNYIGLCPFHDEK
                     TPSFTVSEDKQICHCFGCKKGGNVFQFIQEIENISFTEAVQHLGERVNIKVDIEETND
                     DMHIASDDLKMIQMHEEILSYYHYLLKKTVEGEQALNYLYERGFTDDMIDARKIGFAP
                     DSSHFATDFMEKKGYDLQLGYEAGILSRNDTDFNYYDRFRNRIIFPLANAQGRIVGYS
                     GRTYTEQEPKYLNSPESPIFQKRKLLYNLSEARKSIRQKDEVILLEGFMDVIKADDAG
                     LKNVVASMGTQLSNEHITFLKKLCSHVTLMFDGDFAGIEATMKTGQQLLQQQFNVYVV
                     QLPSKMDPDEYIMKYGAEKFNSFVNTEKKAFVSFKLQQHQHEIQNNDLAYEKYYHMFV
                     EDAALISSHILRNKVVQNASELFKVSADSLNKEVESVHPQQHFEQAGPIPIQTTQWMQ
                     HNKYEKAERAILKHFIMDKEVFLSFYQDIDETDFTNEYFKRIFITLREFYSKFDSFTM
                     SEFVTYIDHDILKEVLIYLWDYPLNREPYENEIADYIQVMTEHRYSESIESLHEKLRE
                     ATRVGDIASQKYFLEMIVNKNRARLKSQE"
     gene            11720..12829
                     /gene="rpoD"
                     /locus_tag="PTC28_000973"
     CDS             11720..12829
                     /gene="rpoD"
                     /locus_tag="PTC28_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HDK5716273.1"
                     /translation="MSDNQVKVIKKETIDPTLTLEDVKKQLIEKGKKEGHLSHEEVAD
                     KLQNFDMDSDQMDEFFDMINDNDIQLINEKDSSDTDDKLNPNDLSAPPGVKINDPVRM
                     YLKEIGRVDLLSAQEEIELAKRIEQGDEVAKARLAEANLRLVVSIAKRYVGRGMLFLD
                     LIQEGNMGLIKAVEKFDFSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETIN
                     KLIRVQRQLLQDLGRDPAPEEIGEEMDLPPEKVREILKIAQEPVSLETPIGEEDDSHL
                     GDFIEDQEAQSPSDHAAYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVG
                     KVFGVTRERIRQIEAKALRKLRHPSRSKRLKDFMD"
     gene            13347..14024
                     /locus_tag="PTC28_000974"
     CDS             13347..14024
                     /locus_tag="PTC28_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenine(22)-N(1))-methyltransferase TrmK"
                     /protein_id="HDK5716274.1"
                     /translation="MIPINKRLDKVSEFVRGEVLADIGSDHAFLPIYCIQKGKIQRAI
                     AGEVIKGPYQSALTNVTTHGYQEQIDVRLGNGLTILEPTDRADTVTICGMGGPLITRI
                     LTEGISYIPNQPRLILQSNIQSEPIRRFLQQHGYRITTETLVKERAHIYEIIVADPGK
                     MQLSDRDFKFGPYLHPEPNALFVEKWERELEALADIKKQLDPDKHHHRYHEIEAQEND
                     IKEVLSQ"
     gene            14021..15124
                     /locus_tag="PTC28_000975"
     CDS             14021..15124
                     /locus_tag="PTC28_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HDK5716275.1"
                     /translation="MKLHELLTTLNQEVPFDTAESWDNVGLLIGDKQSVVNGILTALD
                     CTLDVVEEAIDQNINTIIAHHPLIFKGVKHITEDGGYGSILYRLIQNNINLIALHTNL
                     DVHPKGVNAMLAKKLGLKNNELLDRQTTMYYKVQVFIPKENAQAFKDTLADHGMATEG
                     NYEYCFFNSEGEGQFKPVGEANPHIGQIGDIETVNELKIEFMIPGSQMTCVQKIIEAN
                     HPYETPVYDFIPMKKMSQYGLGMIGDLPEPQSVESFVQSVKKVLKMPSVRYIGNRDTT
                     IQRVAIVGGAGIGFENLAHQRGADLFITGDIKHHEALDAKMAGINLLDINHYSEYVMK
                     EGLVSLLQDWLADVSTQIPVIASSVHTDPYDYM"
     gene            complement(15278..16246)
                     /locus_tag="PTC28_000976"
     CDS             complement(15278..16246)
                     /locus_tag="PTC28_000976"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HDK5716276.1"
                     /translation="MEIIKITPRGYCYGVVDAMVIARNASLDPNLPRPIYILGMIVHN
                     KHVTDAFESDGIITLDGPNRLEILDQINEGTVIFTAHGVSPEVKRRAKDKGLTCIDAT
                     CPDVENTHQLIRDKKAQGYHVVYIGKKGHPEPEGAVGVAPDIVYLVETKEDVEALPDT
                     LNDYPLIVTNQTTMSQWDVSHLMDDLQERFPHVEQHKEICQATQVRQEAVADQAGAAD
                     LLIVVGDPKSNNSNRLAQVSKDIAHTNSYRIADLSQLDLRWLKDVETVAVTAGASTPT
                     PIVKEVINFLKDYDPMNSETHVTASNVPVEKILPKIKKAKPVKIME"
     gene            16427..17761
                     /locus_tag="PTC28_000977"
     CDS             16427..17761
                     /locus_tag="PTC28_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDK5716277.1"
                     /translation="MAKHPFDQFRFDSTLIEAITALNFKQPTEIQQRVIPKIMKQVNL
                     IGQSQTGTGKSHAFLLPLFQQIDPEIHEPQSIIVAPTRELATQLYQAATQLSEYKTGI
                     KVSLFIGRTDFEKDKQKTTVQPQLIIGTPTRINDLAKIGALHVHLAHYLVIDEADLMI
                     DLGLIEEVDQIAAKLDDDAKMAVFSATIPKSLHPFLNKYLEHPEFVEVKSETKNKKSI
                     EFYLIPTKGSQKIEKAVALFEMLNPYLAIIFCNSRDSANQLANELQHQGIQVGMIHGG
                     LTPRERKQQMKRIRNLEFQYVIASDLASRGIDIEGVSHVINFDVPKDIDFFTHRVGRT
                     GRGNYKGVAITLYTPEEDGLIAAIENKGYLFENVDIKDGEFKPIKAHNTRQLRQKQDD
                     HITQKVKHKVKRNTKKKVKPGYKKKYKQELEQLKRQEKRQFSRMKKRQSRKK"
     gene            17786..18679
                     /locus_tag="PTC28_000978"
     CDS             17786..18679
                     /locus_tag="PTC28_000978"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HDK5716278.1"
                     /translation="MLIGSHVSMSGKKMLEASAEEAHRYGASTFMIYTGAPQNTRRKA
                     IEELNIEAGHKAMERYNLSNIVVHAPYIINIANTQKPEVFELGVNFLQNEIERTEALG
                     AKDIVLHPGAHVGAGADVGIKRIIEGLNEVLTNQNDVRIALETMAGKGSEIGRTFEEI
                     AQIIDGVTHNERLSVCLDTCHIHDAGYDVINDFDGVLNEFDRIIGVDRIKVVHVNDSK
                     NPISAHKDRHENIGFGHIGFDALNYVVHHEQFENIPKILETPYVGEDKKNKKPPYRYE
                     IEAFKNETFDPNMKNKILSQA"
     gene            18864..19634
                     /locus_tag="PTC28_000979"
     CDS             18864..19634
                     /locus_tag="PTC28_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HDK5716279.1"
                     /translation="MSQPVFELKNIDFFYEHKKVLENINIRIHHGQFLAIVGPNGAGK
                     STLLKLILGILPIQKGEIYIDGESYNKKLTTDKISYVSQKASSVTAGFPATVKEVVLS
                     GLTRRKKLFKWFSKEDDHKVDQVLERLNISTLKHKNIAQLSGGQQQRVLIARALVSDP
                     AVLVLDEPTNGIDAKHVGEFYETLNHLKQEGVTIILVTHDIGVVADTATDVACLNKHL
                     HFHGAVSEFKSLDEVEISKIYGHPIKFVDHKHDRDCCV"
     gene            19631..20518
                     /locus_tag="PTC28_000980"
     CDS             19631..20518
                     /locus_tag="PTC28_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDK5716280.1"
                     /translation="MIDAILNFEFIRYSFISGILIGLIAPLIGTFIVVRRLSLIADAL
                     SHVTLGGISFGMFLITLSPLFAFVNPIWTGILFAIIGALLIEYLRTSYKNYQEIAIPI
                     IMSTGIGLSAIFISLAKGFNQELVGLLFGSISAVSISDLITIVTISVLVLAFIMLFYK
                     ELFILSFDTEYSQVIGIPKWIQFLFIVIVALVISASMRVIGVLLVSALITLPVAIAMR
                     WTKGFKQFILISIIIGEFSVIVGLVTAFYLNISPGGIIVVILVIMLGLTLFYQSFVTG
                     KLKGVKRNENGRSHSYIEK"
     gene            20481..20888
                     /locus_tag="PTC28_000981"
     CDS             20481..20888
                     /locus_tag="PTC28_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HDK5716281.1"
                     /translation="MKMEEAIRILKNNGHKYTDKRRDMIEMFIKEDKYINAKTVQQQM
                     NNHYPGISFDTIYRNLHLFKILGIIEGTELDGEMKFRAACTSHHHHHFICTVCGDTKV
                     IDFCPMTEIKASLPNVEIEMHKLEVYGMCEKCK"
     gene            complement(21162..22259)
                     /gene="ispG"
                     /locus_tag="PTC28_000982"
                     /gene_synonym="gcpE"
     CDS             complement(21162..22259)
                     /gene="ispG"
                     /locus_tag="PTC28_000982"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002194540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HDK5716282.1"
                     /translation="MTHRKNTRPVKVGDLTIGGADEVVIQSMTTTKTHDVEATVAEIK
                     RLEEAGCQIVRVACPNEEDAHAIKDIKAQINIPLVVDIHFNYKLALIAIENGADKIRI
                     NPGNIGRREKVEAVVEACKAKGIPIRIGVNAGSLEKHILKKYGYPTADGMVESALHHI
                     KILEELDFHDIIVSMKASDVNLAIEAYTKAAKAFDYPLHLGITESGTLFNGTVKSSAG
                     LGAILSLGIGNTMRISLSADPVEEVKVAKSLLKSFGLASNAATLIACPTCGRIEIDLI
                     SIANEVEEYIEKLQIPLKVAVLGCAVNGPGEAREADIGIAGARGEGLLFMKGKTVRKV
                     PEETMVDELKMEIDKLAAEWEENKKQEAAQN"
BASE COUNT         7482 a         3879 c         4346 g         6775 t
ORIGIN      
        1 attgtttgta tttggtgcag tgttaggtat tattggcatt acacttatta ttataagctt
       61 tgttacgctt ggtgataatt tatcaatgat gttatttaat gtcgtgtttg catcaatttt
      121 gacattaatc gagtgggtgg ttttagtgaa atttttcaaa aaaagtatag cgatatttga
      181 caaagtagta ttaaaagatt caacgagtaa agaatctggc tacacatctc ataatgatcg
      241 ctctcatctc gttggcgaaa ttgcagtgag ttatactgat ttacgtcctt caggtattat
      301 tattttgaac aacgagcgta ttgatgctgt ttctgaaggt tcttttatta gtaaagacat
      361 gaaagttgca atcatcgagg ttgagggtac acgtgtcgtt gtaagagaaa tttaaatata
      421 aggagcgaat gtcatgttaa caagtggatt aattactttc attgttattg ccgtattaat
      481 aattgttgcg ttattaattt tattttcgtt tgtcccagtc ggcttatgga tttctgcatt
      541 agctgctggt gtaaaagtag gaattggtac attagtaggg atgcgtttac gtcgtgtgtc
      601 accgcgtaaa gtcattggcc cactcattaa agcgcataaa gcaggtttac atttaacaac
      661 aaaccaactt gagtctcact atttagcagg tgggaacgtg gatcgtgttg ttgatgcgaa
      721 tatcgcggcg caacgtgcgg atattaattt accgttcgaa cgtggtgcag ctatcgattt
      781 agcaggtcgt gacgtattag aagctgtaca aatgtcagtc aaccctaaag tcattgaaac
      841 accatttatt gcgggtgttg cgatgaacgg gattgaagta aaggcaaaag cgcgtattac
      901 tgtacgtgca aacatttcac gcttagtcgg tggtgcgggt gaagatacga ttattgcccg
      961 tgtaggtgaa ggaattgttt caacaattgg ttctagtgaa caccatacac aagttttaga
     1021 aaaccctgat aacatttcta aaactgtttt aagtaaaggt ttagattcag gaacagcctt
     1081 tgaaatttta tctattgata ttgctgacgt agatattagt aaaaacattg gtgccgactt
     1141 acaaactgaa caagccattg cagataaaaa cattgcacaa gccaaagcgg aagagcgtcg
     1201 tgcgatggcc gttgcacaag agcaagaaat gaaggcacgt gtacaagaaa tgcatgcaaa
     1261 agtagtcgaa gcagaggcac aagtacctct agcattagca gaagcattgc gttctggtaa
     1321 tatcggtgta aaagattatt ataatctaaa aaatattgaa gcagatacag ggatgagaga
     1381 agccattaat aaaagcactc aaaacaataa ctcaacacct gaacagtaat tgaggtgatt
     1441 agatgagcat tggaacgatt atatttatta tcaccattgc tatttcttta tttagtgcag
     1501 ttagtgataa aagtcatgag aaacgccaaa aacaaaacaa acctcacaac aacaaaaagg
     1561 aaacagcacc tcaaaaaagt ggcggtttcc tagagaatgt ccaacaaaag cttgaagagt
     1621 ttgaaagaga actttcagat tttgatgaac caaacgaacc gtctcagcca caaccagcac
     1681 aacaactgaa acgtaaaaag acggtaagac ctgagcctac tcaattcgaa aaacaagctg
     1741 aagcgacaaa gccaaaaacg caagaaaatc aaaagcaggc tatagaaatg caacaaatgt
     1801 tggatcaaca tatgcgtgaa ctcgatcaac aacttgataa agaaagacaa aagcgaattg
     1861 cacacattga aagacgcgcc aaaaatatca ttcaagataa ttatttatcg catcgtacaa
     1921 agcaatttaa attaaaacaa ttgttggaag aaaacaatac aactgctatc caacaaggcg
     1981 atttaacatt ttctaataat gaggtcgtga atgggctcat ttggtcagaa gttttaaacc
     2041 gaccaaagta gttataaaac tctcttaaga tgaggcaaga aatgatttca gtagagcaac
     2101 tgagattgtc gcttgcctca tttgttttgc tctttaatta ttaaataaat gtagaaatat
     2161 ttcatgaagc accgtatctc ttcaatgaaa aatgtacata gcttttcaac ctttaaaatg
     2221 ttaaaataga ttccctataa aaatgctgac aagttatctt tcaacatatg aattgaatgt
     2281 gaataacaag taacaaacgg cgtaaacgtg ctataataag tatgtagcag tcgcaaaaat
     2341 ataaaacgca tcatacatga caatttgata cattgataat aaacaatatg agcaaaggag
     2401 ttactttatg ccggaattga ttcagatcga cgacatcaac caagcacaag ctttattagg
     2461 aaacaatgat gaacatattc aacttattga agaagcattt gatgttgtca ttcatgccag
     2521 aggacaagaa gttgcagtta agggcgaaaa ggtcagcgct gtaacagaag ctgaatctgt
     2581 gctaatcaac ttattaaaag tcatcgagca aggggcatct attactgtta aagatgtgca
     2641 agctgcaatt aaaatggcta aaaacggaca aattgagcat ctcattgatt tgtacgaaga
     2701 ggaaattact aaagatgcat tcggcaaaac gattcgagct aaaacgatgg gacaacggat
     2761 gtatatccat gcaatgaaaa ataatgattt agtgttcgga attgggcctg ctgggacagg
     2821 taaaacattt ttagccgtcg tttttgctgc aaaagcgtta cgtgcaggac aagtgaaacg
     2881 tcttgtctta acacgtccag ccgtagaagc gggagaatca cttggctttc taccaggcga
     2941 cttaaaagag aaggtggatc catatttacg tccgctatat gatggtttaa ataccgtttt
     3001 agggacggaa caaacggcac ggctcattga acgtggcgtc atcgaaattg caccacttgc
     3061 ctacatgcgt ggtagaacgt tagaagatgc gtttgtcatt ttagacgaag cgcaaaatac
     3121 gacacatgca cagatgaaaa tgtttttaac gcgacttgga ttcggttcta aaatggttgt
     3181 cactggagat aaaacacaga tcgatttacc tcgtggtgtt aaaagtggtc tgattgaagc
     3241 tgaacaacgc ttaaaaaata ttaaagggct cgcgattcaa catttagacc aagctgatgt
     3301 ggtccgtcat ccgctagtag gtcaaatcat cagtagatat gaggaggact aattgatgtt
     3361 tacaattgat tttagtgacc ataccgatca agtgaaagat gactggtaca cacagattcg
     3421 agatgtgtta gaattcgcta aaaatgaaga gggcattgat gaagacgccg aactttctgt
     3481 cacttttgta gataaagctg agattcaaga gattaatcgt gattaccgtc aaaaggataa
     3541 agtcacagat gtcatttcgt ttgcctttga agaagaggaa gacatttttg aaggtatgga
     3601 tgtccctcgc gttttaggag acatcattat ttgtacggat gtcgcagcgg aacaggcaga
     3661 acaatacgga cattcttttg aacgtgaact cggcttttta gcacttcatg gctttttaca
     3721 tttgttaggc tatgatcata tgacagaaga agacgaaaag gtcatgtttg ggcgccaaaa
     3781 agacatttta aatcaatttg gattgacgag agactaatgt tcaaccgttt taaatatgcc
     3841 tttcaagggt gccgaacgat tttaattaaa gatcgaaact ttttatatca tcttatcata
     3901 gcattcttaa tactcatttt aggatgggca ctgccattaa gtacaataga atggctcttc
     3961 atcattttag cgatatttct tgtcattatt acggaagcta tcaatactgc aatagaatat
     4021 gttgtcgatt tggcgacgca agattttcac attttcgcaa aacatgctaa agacgtcgca
     4081 gcatttagtg tcttacttgc atcactcttt gcatttattg taggttgcat catttttata
     4141 ccgaaattcg tttcattttt ttaagaggag aagataaaca tgggctatac agataaacat
     4201 tacacagagg ttagaaaagc acaacaaaaa gcttatgcgc catacagtca atttaaagtt
     4261 ggcgcatact tagtcactaa agatggacaa actttccatg gcgccaacgt tgaaaatgcc
     4321 gcgtatccct catgtatttg tgcagaacgt tccgcattag tggcggcaat ctcgcaagga
     4381 tacaaaccag gagattttga atcaatcact atcacagtag acagtccaga acttgcatca
     4441 ccatgtggac cttgtcgaca agtaattcat gagctttgtg atgacgatat gccagtgtat
     4501 atgacgaacc aaacgggtga aatgcgtgaa gcaacagtag ccgaactatt accatatgga
     4561 ttttcaggaa aggatttaaa tttatgagtg aatataagtc aggatttgtg accattattg
     4621 gacgcccgaa tgtagggaaa tcaacgtttg tcaatcgtgt tattggtcac aaaatcgcga
     4681 ttatgtcgga taaagcgcaa acaacgcgta ataaaattca aggtgtgatg acacaacaag
     4741 acgcacaaat cgtctttcta gatacacctg gtattcataa accaaaacat aaattaggtg
     4801 actatatgat gaaagttgct aaaaacacac tttctgaaat tgatgcggtc atgtttatgg
     4861 tcaatgttaa tgaagaaatt ggtcgcggag atgaatacat tatggaaatg ttaaaaacgg
     4921 ttaaaacacc tgtcttttta gtgctgaaca aaatcgattt agttcatcca gatgctttaa
     4981 tgccaagaat cgaacaatat caacgttata tggattttgc agaaattatc cctatctctg
     5041 ctttagaagg acataacgtc gaccatttca tcaatgtact taaatcctat ttaccagaag
     5101 gcccgcaata ctatcctgat ggccaaattt cagatcatcc tgaacaattt gtagtgagtg
     5161 agctcattcg tgaaaagatt ttacaaacga ctagtgagga aattccacat gctattggtg
     5221 tcaacgttga acgtatgact caggaatccg aagatcgggt gcatattgaa gcggtcatat
     5281 atgtggaacg tgactcacaa aaaggcatcg ttattggtaa aggcggtaaa aaactgaaag
     5341 aagtaggtaa gcgcgcgcgt ttggatattg aacatttgct aggttctaaa gtttatttag
     5401 atttatgggt gaaagttcaa aaagattggc gtaacaaatc aagctttatt aagcaaatgg
     5461 gctatgtaga agatgaataa tcgttaatta gaggtggtga tgaagtgctc gttaaacaaa
     5521 aaggcatcat tataaaagca gtcgattatg gtgagtctga caaaatcatt actatcttaa
     5581 atgaacatgg ggcaaaagtg ccgctcatgg tccgccgtgc taaaaagatt aaatccggtc
     5641 tccaagctac aactcaaatt tttgtacaag gtttgtttat ttataatcag tggaaaggga
     5701 tggggacgct cacttccgtt gacgtcctca atcttaatta tgaacttcgc caagacattt
     5761 atgcgcacag ttatgccagt ttatgtttgg aaacgattga tcgtgcgatg gaaaccgatg
     5821 aaatcaatcc aacaatgtat cgattgttgg atttcgcttt tgatcgtttt caacaaggtg
     5881 tatcaccaca actgattgca aatattgtga tgttaaaatg tatgcctcgt tttggctttg
     5941 atgtagattt atcgaaatgc gtcatgacag gtgagaccaa tcctgcaaag ttgacgcatt
     6001 ttagttttaa atttgatggt attattgcaa cagaagtcac acatcgcgat ccacatgcat
     6061 tacctctatc aaataaaacc atttatttaa cgtatgtttt aaaagattta ccgttagaca
     6121 aaatcaatgc attgcgtatt caagatgcaa ttgttgaaga aatgtctaag ttcatcttat
     6181 tgttatataa agaatatgca gggatgtatt ttaaaagtca acggttgatt aatcaattga
     6241 atcgactaaa ggtcacggat agcactgatg attgatatgt tgaggggaga gataaaaaat
     6301 tttgtcctca tcatcttcag ttttcaattg atttttaact atagatataa acatagtaga
     6361 tagagggtag gaaaacttaa tggtctaccc aaattaaaga ttaaaccgtt atttctcaaa
     6421 tttgtcattc atatcaaaaa cctcgcccga tagttcgcat cattggacga ggttttttat
     6481 tcgatattaa ttagaattta actttttcag ctaagaatgc attaagttcg ctaattggca
     6541 tacggacttg ttccattgtg tcacggtcac gtacagtcac ttgttgatct tctaatgaat
     6601 caaagtcaaa tgtaatacag tatggcgttc cgatttcgtc ttgacgacgg taacgtttac
     6661 caatagattg agattcgtca aagtctacta caaagtcttc actcaattgt tcgtaaactt
     6721 taatcgcatc tgcagacaat tttttactta gcggtaatac agcagcttta tacggcgcga
     6781 tagcagggtg gaagtgaaga acagtacgtg catctttgct tccttcaacc ccttcttcat
     6841 cataggcatc acataaaaat gctaatgtca cacggtctgc acctaatgaa ggctcgatac
     6901 aataaggaat atatttttca tttgtttcag gatcgtgata gctgaagtct tcaccagaat
     6961 gttcgctatg tttttttaag tcaaaatctg tacgactcgc gataccccat agttcgcccc
     7021 aaccaaatgg gaagcggtat tcgatatcag ttgtcgcgtt tgagtaatgt gataattcat
     7081 cttcatcgtg gtcacgtaaa cgcgtatttt ctttagccaa ccctaaactt tcaagccaat
     7141 ttgccgcaaa atctttccaa tagttttgcc attcaatttc agtgcctggt ttacagaaga
     7201 attcaagttc catttgttcg aattcacgtg tacggaaaat gaagttacct ggtgtgatct
     7261 catttcggaa tgatttaccg atttgaccaa taccaaatgg caatttttta cgcattgaac
     7321 gttgaacatt tttatagtta acgaaaatac cttgtgcagt ttctgggcgt aagaaaattt
     7381 cgtttgttga atcttcagtt acaccttgga atgttttgaa cattaagttg aattgacgga
     7441 tgtctgtcca gtttgcagta ccactgacag gacaagtgat gccttcttca tcaataatac
     7501 gtttcatttc atcaaaactt aaaccgtccg ctataaagtt ttcgtcacct ttcacgttag
     7561 ccatataatc ttcaattaac ttgtccgcgc gataacgaat tttactgtct ttattatcaa
     7621 tcattggatc gttaaagtta cctaagtgac ctgaagcttc ccaagtttta gggttcatta
     7681 aaatagcagc atctaaacca acgttataag gggactgtgt aataaacttt ttccaccatg
     7741 cttttttaac gttgttttta agctcaacac ctagaggacc gtaatcccaa gtgtttgcta
     7801 agccaccata aatttcacta cctgggaaaa caaaccctct atgcttagcc agttgtacaa
     7861 tcgtatccat gtttttcttt tccatatttt acactcctta aaaattaaaa aaatcccaag
     7921 ccaaagaatt aactttgcct tgggacgaat tattagaata atccgcggtt ccacccaaat
     7981 tagtgtagcc actcactttt atttaaattg aatcgttacg ccaaatcaaa gtgttaagct
     8041 ttcaccgtcc ttaactcgct ttatttttaa ttttaaatta tacgaaaagg aaaggcaagg
     8101 aaaaacataa ttgtctgata atccataaca agttataatg gaaattgtat tcaataaaaa
     8161 gatgcattga tttacgccac atgattattc cttgcgatgt gacatattta ttgttttttc
     8221 gatgatgaac atagatgcgc atcagaaagg agtcaattcg agtaacaaat gatgatacga
     8281 aatgtaaaaa atatagtgct aatatgtaaa aagggggcac ttctgctatt taattagcat
     8341 aaccgcttat ttgtcggttt taaatagaca gagactcaga tagaactcaa ttcaagacag
     8401 gaacacattg ttgaaattgt aaagtctgat ggacctatta ctggagaaaa aattgcggaa
     8461 caactgaatt taacacgtgc aacattacgc ccagaccttg ctattttaac aatggcagga
     8521 tttttagagg caagaccacg cgtcggttat ttttattcag gaaaatcgag ctcgcaactt
     8581 ttgaccgaaa aatttaaaaa atatgttgtt aaagattacc aatcccagcc cgtcatttta
     8641 aaaagtaatg ttaccgttta tgaagcgatt tgttcaattt ttattgaaga tgtaggaaca
     8701 ttatttatcg ttaatgaaga taatgaactt gtcggcgtat gttcaagaaa agatttgctt
     8761 agagcgtcga tggcaggaca agatattcat tcgatgcctg ttaatatcat tatgacacgt
     8821 atgccgaata ttgtattact taaagaaaat gacctcgtac tttatgctgc gagacagatg
     8881 attcataaag aaatcgactc aatacctatt gtaagagaaa aagataacgg caaatttgaa
     8941 gtcactggcc gtatctccaa aacaacgatt acgaaattat ttgtatcgtt gttcgattag
     9001 taggaggata atctatgacg aatgtaaaaa tcattattgc ttcagactca gtgggagaaa
     9061 cagctgagtt agtcgcaaaa gcgtgtatgt ctcaatttaa ttatagcgat tgttcaaatc
     9121 atattcttcg ctatccttat attgaaacga aagaaaatat agatgaagtc atagcggttg
     9181 ctagagaagt agaatctatt attatctata cactcgtgaa accagatatt agagcgcata
     9241 ttcaagaaaa tatcgacaaa tatggcctca aatccgttga cgtcatggga ccaatgctca
     9301 atgtaatgga agatacattt cacaaaaaac cattgaatga gccgggtgtc gtgcataaat
     9361 tagatgagga ttactttaaa aaaattgaag caatggaatt tgcagtgaaa tacgacgatt
     9421 gtaaagatcc aaaagggttg cctaaagcgg acattgtgct tatcggtatc tctcgtacat
     9481 caaagacgcc tatctcacaa tatttagcgc ataaacgtta taaagtgatg aatgtcccga
     9541 ttgtccctga agtgacaccg ccggaatcat tatttgaagt ggacccgaaa aaatgtgtag
     9601 cgctcaaaat tagttccgat aaattaaatg ctattcgaaa agagagatta aaacaacttg
     9661 gcttatcaga ttcagcacgt tatgcaactg accaacgtat cgctgaagag ttagcgtatt
     9721 tcaatcaaat cgtcgaacgt attggttgcc cagtactcga tgtttcaaat aaagcaattg
     9781 aagagacggc gaataacatt attcaaatta ttgagcataa tcattccttt acgagcgaat
     9841 aagttgtata atgttacaac tatgtgtaaa ttgtacctat aacatagaga tgaatggtga
     9901 tacaaggtga tgacatgaga ataccacaaa atacgattga agaaattaag cagcagtctg
     9961 acatactcga cattgtaagt gaatatgtaa agcttgaaaa aagagggcgc aattatatcg
    10021 gtttgtgtcc ttttcatgat gagaagactc catcgttcac tgtttctgaa gataagcaaa
    10081 tttgtcattg ctttgggtgt aaaaagggag gcaatgtctt tcagtttatt caagaaattg
    10141 aaaatatatc ctttacagaa gctgttcaac atctcggcga acgtgtcaat ataaaggttg
    10201 atattgagga aacaaatgat gatatgcata tcgcttctga tgatttaaag atgattcaaa
    10261 tgcatgaaga gatattgtca tattatcatt atttgttgaa aaaaactgtt gaaggtgaac
    10321 aagctttaaa ttatttatat gaacgtggct ttacagatga tatgattgat gcgcgtaaaa
    10381 ttggctttgc acctgattca tcccattttg ctacggattt catggaaaag aaaggttatg
    10441 atttacagct aggctatgag gctggcattt tgtcccgtaa tgacacagat tttaattact
    10501 acgatcgctt ccggaatcgt attattttcc cacttgctaa tgcacaagga cgtatcgtag
    10561 gctattctgg tcgaacgtac acagagcaag aaccgaagta cttgaatagt ccagaatcac
    10621 ctattttcca aaagcgcaaa ctgttataca acttgtctga agcacgcaaa agtattcgtc
    10681 aaaaagatga agtcattctt cttgaaggtt ttatggatgt gattaaagca gatgatgcag
    10741 gtttgaaaaa tgtggtagca agtatgggca cacagctttc taatgaacat atcacatttt
    10801 taaagaagct ctgtagtcac gtcacgttaa tgtttgatgg ggactttgcg ggtatcgaag
    10861 cgacaatgaa aacaggacaa caacttttac aacaacagtt taacgtttat gtcgtacaat
    10921 taccgtcaaa aatggatcca gatgaatata ttatgaaata cggtgcggag aagtttaata
    10981 gttttgtgaa taccgagaaa aaggcatttg ttagtttcaa acttcaacaa catcagcatg
    11041 agattcaaaa caatgattta gcatatgaaa agtactatca catgtttgtt gaagatgctg
    11101 cgttgatttc atctcatatt ttaagaaata aagtcgtaca aaatgcttca gaattgttta
    11161 aagtgagcgc tgatagtcta aataaggaag tagaaagtgt tcacccacaa caacattttg
    11221 aacaagccgg acctattccg atacaaacga cgcagtggat gcaacataat aaatatgaaa
    11281 aagctgaacg tgcaatttta aagcatttca ttatggataa agaagtattt ttaagttttt
    11341 atcaagatat tgatgaaaca gactttacaa atgaatattt taaacgtata tttattacct
    11401 tacgagaatt ttattcaaaa tttgattcgt ttacgatgag cgaatttgtc acatatatag
    11461 atcacgacat attaaaagaa gtgttgatat atttatggga ttatccactt aaccgggaac
    11521 cgtatgaaaa cgaaatcgct gactatattc aagtgatgac tgaacatcgc tattctgaat
    11581 cgattgaatc actccacgaa aaattgcgag aagcgacacg tgtaggagat attgcatctc
    11641 aaaaatactt tttagagatg attgttaaca aaaatagagc tagattgaag agtcaagaat
    11701 aattttggga ggccttttta tgtcagataa ccaggtaaaa gtaatcaaaa aagaaaccat
    11761 cgatccgaca ctcacattag aagatgtaaa aaaacaactt atagaaaaag gtaaaaaaga
    11821 aggtcatcta agtcatgaag aggtagcaga taaattacaa aattttgata tggattctga
    11881 tcaaatggac gaatttttcg acatgattaa cgacaatgac attcaactta ttaatgaaaa
    11941 agacagttct gatacagatg ataaattgaa ccccaatgat ctaagtgcac ctccaggcgt
    12001 taaaattaat gaccctgtac gtatgtattt aaaagagatc ggtcgtgttg atttgttaag
    12061 tgcacaagaa gaaattgagc ttgccaaacg cattgaacaa ggtgatgaag tagcgaaagc
    12121 acggttagct gaagcgaact tacgtcttgt tgtcagcata gctaaacgtt atgtcggtcg
    12181 tggcatgcta tttttagatt taattcaaga aggtaatatg ggcctcatca aagcagttga
    12241 aaaatttgat tttagtaaag gtttcaagtt ttctacttat gcgacatggt ggattcgaca
    12301 ggcgattaca cgtgcgattg ctgaccaagc acgtacgatt cgtattccag tacacatggt
    12361 tgaaacgatt aacaaactga ttcgtgttca acgtcaatta ttgcaagatt taggccgtga
    12421 tcccgcacct gaagaaattg gtgaagaaat ggatttacca ccagaaaaag ttcgagaaat
    12481 tcttaaaatt gctcaagaac cagtgtcact tgaaacacca attggcgaag aagacgatag
    12541 ccatcttgga gattttattg aagatcaaga agcacaaagc ccgtctgatc atgcggctta
    12601 tgaattgttg aaagaacagt tagaagatgt tctcgataca ttaactgacc gtgaagaaaa
    12661 cgtattacgc ttacgttttg gtttagatga tggtcgtaca cgtacacttg aagaagtagg
    12721 taaagtgttc ggtgttacgc gtgaacgaat tcgtcaaatc gaagctaaag cattacgcaa
    12781 attaagacat ccaagtcgaa gcaaacgctt aaaagacttt atggactaat acaattgaaa
    12841 gagatgaagc ataaaaattt ttgatgctgt tgatgcaata tttttgttaa acttgtcctt
    12901 cctatgaatt gtgggttttg atttccttca tggcttcgcg ttcctagtgg tcggtcatac
    12961 aatgaattaa cactcgattc aactgttaca tttgatgagg cgttagtgga ttttgggagt
    13021 agtacagaaa tctcatgtgt aacaaagatt tcgtcgcact gacccgcatg gctgactaga
    13081 cttcttaaaa gcgagcacct tgagagggca gacagcatac acgcaatctc ttaagcgtct
    13141 tagccttttg atcaaactta catcaaatgc aacagcttaa gacaagttta tagaatgagg
    13201 acaaacaata atatccaatt catccacatt tttttgactt ttttatcatt attaatggat
    13261 ttgagtccat aaaatagata gagactggga aaactcaata tcccggtccc tttttattat
    13321 gattatcaat atgaaggaga aacatcatga ttcctattaa taaacgactg gataaagtaa
    13381 gcgagttcgt gcgaggggaa gtgcttgcag atattggttc tgaccatgca tttctaccca
    13441 tttattgcat tcaaaagggc aagattcaac gggcgattgc tggagaagtc atcaaaggcc
    13501 cttaccaatc tgcattaacg aatgtaacga cacatggcta tcaagaacag attgatgtcc
    13561 gtttaggcaa cggcttaaca atattagaac cgacagaccg cgccgatact gtaacgattt
    13621 gtggtatggg aggtccactc atcacgcgta ttttaactga agggatttca tatataccga
    13681 atcaaccgag actcatactc caatccaata ttcaaagcga accgattcgc cgctttttac
    13741 aacaacatgg ctatcgcatt acaacagaaa ctttggtgaa agaacgtgca catatttatg
    13801 aaattatcgt tgcagaccca ggaaaaatgc aattatctga cagagacttt aaatttggtc
    13861 catatcttca tccagaaccg aatgcattgt ttgtagaaaa atgggagcgt gaactcgaag
    13921 cactagcaga tattaagaag caattagatc ctgataagca tcatcatcgt tatcatgaaa
    13981 ttgaagctca agaaaacgac attaaagagg tgttatcaca atgaaattac atgaattgtt
    14041 aacaacatta aatcaagaag taccgtttga tactgctgaa tcttgggata atgtcggttt
    14101 actcatcggt gataaacaaa gtgtagttaa cggcattttg acagcattag attgtacgtt
    14161 agatgttgta gaggaagcaa tagaccaaaa tattaacacc attatcgcac accatcctct
    14221 tatttttaaa ggtgtgaaac acattacaga agatggtgga tacggttcga ttttatatcg
    14281 tctcattcaa aacaatatta atttgatagc attacatacg aatttggatg tccatccaaa
    14341 aggcgtcaat gcgatgctag ctaaaaagtt gggcttaaaa aataatgaac tattagatag
    14401 acaaacaaca atgtattata aagttcaagt gttcattcca aaagaaaacg cacaggcttt
    14461 taaagatact ttagctgacc atggtatggc gactgagggc aattatgaat attgtttttt
    14521 caattctgaa ggagagggtc aatttaagcc agtgggagaa gcgaatccac atattggaca
    14581 aattggtgat attgaaacag ttaatgaatt aaaaattgag tttatgattc ctggcagtca
    14641 aatgacatgc gttcaaaaaa ttattgaagc taatcaccca tatgaaacac ctgtatacga
    14701 ttttataccg atgaaaaaaa tgagtcagta tggcctcggc atgataggcg atttaccaga
    14761 accgcagtca gttgaaagtt ttgttcaatc agtgaaaaaa gtgctcaaga tgccaagtgt
    14821 gcgctatatt ggtaatcgag atacgacaat tcaacgtgtt gcaatcgtgg gcggtgcagg
    14881 gattggtttt gaaaaccttg cacatcaacg cggtgcagat ttgtttatca caggagatat
    14941 taagcatcat gaagcgttag atgctaaaat ggctggaatc aatcttttag acatcaacca
    15001 ttatagtgaa tatgtaatga aagaaggctt agtatcacta ttgcaagatt ggttagcaga
    15061 tgtatcaaca caaataccag tgatagcatc atccgtgcac actgaccctt atgattatat
    15121 gtagataagg acgttcattt cggcatgatt gactaaaagc aatgatatgt tcaaacgctt
    15181 accagaaaac ttacattcaa aaagtttaaa cagtaaaaag cctgagatgc aacatcccag
    15241 gctttttata atgctccttt actcaattaa acgtgattta ttccataatt ttaaccggct
    15301 tagctttttt aattttaggt aagatttttt caaccggcac gttagaggca gtgacatgtg
    15361 tttcagaatt cattggatca taatctttta agaaattaat tacttcttta acaattgggg
    15421 taggcgtaga agcccccgcc gtcaccgcta cagtttctac gtcttttaac caacgcaaat
    15481 caagctgtga taagtctgca atacggtaag aatttgtatg tgcaatatct tttgacactt
    15541 gcgcgagacg atttgaatta ttactttttg gatcgcctac aacgatgagt aaatctgcag
    15601 cacctgcttg atctgcaact gcttcttgac gtacttgtgt cgcttggcaa atctctttat
    15661 gctgctcgac atgagggaat cgctcttgta aatcatccat taaatgtgag acatcccatt
    15721 gcgacatggt tgtttgattt gtcacgatta aagggtagtc gttcagtgta tcaggcaacg
    15781 cttccacgtc ttctttcgtt tccacgagat aaacgatatc aggtgcgaca ccaacagctc
    15841 cctctggctc aggatgtcct tttttaccaa tatagacgac atgatagccc tgcgcttttt
    15901 tatcacgaat gagttgatgg gtattttcaa catctggaca tgtcgcgtca atacatgtca
    15961 gtcctttatc tttagcacgt cttttaactt caggtgatac accatgtgca gtgaagataa
    16021 ctgttccttc attaatctga tctaatattt ctaaacgatt cggtccgtct aatgtaataa
    16081 ttccgtctga ttcaaaggca tctgtcacgt gcttgttgtg cacaatcatt cctaatatat
    16141 atatcggacg tggtaagttt ggatcaagtg atgcattacg tgcaatcacc atcgcatcga
    16201 ccacgccata acaataacca cgtggggtaa ttttaatgat ttccattctg taagcgaacc
    16261 tcctttaata actcattata ccaattacac agcagtttta aaattaatac acaactagcg
    16321 atttgtaaag tcaaggacat taaaaaccaa aaacatttac ttgtatgttt tcattaacca
    16381 taaattcatt tataatatag agacgaatct ttaaggaggc caaaccatgg caaagcatcc
    16441 atttgaccaa tttcgttttg attcaacttt aattgaagca ataacggcat taaattttaa
    16501 acaaccgaca gaaatacaac aacgtgttat ccctaaaatt atgaagcaag tcaatcttat
    16561 tggtcaatca caaacaggga caggtaaatc acatgcattt cttttaccat tattccaaca
    16621 aatcgaccca gaaattcacg agccacaatc tatcattgta gcaccaacac gtgaacttgc
    16681 cacacaatta tatcaagcag ctacacaatt aagtgaatat aaaacaggga ttaaagtgag
    16741 tctgtttatc ggtagaacgg attttgaaaa agacaagcaa aaaacgacag tacaacccca
    16801 attgattatt gggacaccga cacgtattaa cgatttggct aaaattggtg cactccacgt
    16861 tcatcttgca cattatttag ttattgacga ggcggattta atgattgact taggtttaat
    16921 tgaggaagtc gatcaaatcg ctgcaaaact tgatgatgac gcaaaaatgg ctgtgtttag
    16981 tgctaccatt cccaagtcac tacatccatt tttaaacaaa tatttagaac accctgaatt
    17041 tgtcgaagtg aaaagcgaga cgaaaaacaa aaagagtatc gaattttatc tcatcccaac
    17101 taaagggtct caaaaaatcg aaaaagcagt tgcattgttt gaaatgttga atccatactt
    17161 agcgattatc ttctgtaaca gtagagatag tgccaatcaa cttgccaatg aacttcaaca
    17221 tcaaggcatt caagtgggta tgattcatgg tggcttaacg cctcgtgaac gtaaacaaca
    17281 aatgaaacgc attcgtaacc ttgaatttca atatgtgatt gcgagtgatc ttgcttctcg
    17341 tggtattgat attgaaggag tcagtcatgt cataaacttt gacgttccta aagatattga
    17401 tttctttacg caccgtgttg gtcgtacagg cagagggaat tataaaggtg tggcgataac
    17461 actttataca cctgaagaag atggtttaat cgcggctatc gaaaacaaag gctatctctt
    17521 tgaaaatgtc gatattaaag atggcgaatt taagccaatc aaagcgcaca atacacgaca
    17581 attgcgtcaa aaacaggatg accatattac tcaaaaagta aagcataaag taaagcgcaa
    17641 tacgaaaaag aaagtaaaac caggctataa gaagaagtac aaacaagaac tcgaacaact
    17701 gaaacgccaa gaaaaacgtc aatttagtcg tatgaaaaag cgtcaatctc gaaaaaaata
    17761 gttcattaaa aaggatagga taaatatgtt aatcggatca catgtgtcta tgagtggtaa
    17821 aaaaatgtta gaagcatcag cagaagaagc acatcgatat ggcgcttcaa cgtttatgat
    17881 ttatacaggt gcacctcaaa acacacgtcg taaagcgata gaagagctga atatcgaagc
    17941 aggtcataaa gcgatggaac gttacaatct ttcaaatatt gtcgtgcatg cgccttatat
    18001 tattaatatc gcgaatacgc aaaagccaga agtgtttgaa ttaggtgtta actttttaca
    18061 aaatgaaatt gaacgtactg aagcgcttgg tgcaaaagat attgtgttac atccaggtgc
    18121 acatgtcggc gctggagctg atgtgggcat taagcgtatt atcgaagggt taaatgaagt
    18181 tttaacgaat caaaacgatg tcagaatcgc attagaaacg atggcaggta aaggctcaga
    18241 aatcggtaga acttttgaag aaatcgcaca aatcattgat ggtgtaaccc ataatgaacg
    18301 cttatctgtt tgtctcgata cgtgtcatat tcacgacgcg ggctatgatg tcatcaatga
    18361 ttttgatggt gttttaaatg aattcgaccg tattattggt gtcgaccgta ttaaagttgt
    18421 ccacgttaac gatagtaaaa atccgatatc agcacataaa gaccgtcatg aaaatatcgg
    18481 ttttggacat atcggatttg atgcattaaa ttacgtggta catcatgaac aatttgaaaa
    18541 tatccctaaa attctagaaa caccatatgt gggtgaagac aagaaaaata aaaagccacc
    18601 gtatcgttat gaaattgaag cattcaaaaa tgaaacgttt gatccaaata tgaaaaacaa
    18661 aattttatca caagcataat caaaatttta aaacagctgt acctcaaaag gggtatggtt
    18721 gtttttattt tcacaacatc agctacactt gttttctcac tttaaaccca ttcaaattgt
    18781 ggtataatga taaagtctta tcgtaaacgt tactatttac atttccgtat aggcgcgtta
    18841 tagttagaaa ttgaggtgaa aaaatgtcac aacctgtatt cgaactcaaa aatatagatt
    18901 tcttttacga acataaaaaa gtgctagaaa atattaatat tcgtattcat catggccagt
    18961 ttttagctat tgtcggtccg aatggggcag gtaaatcaac gctccttaaa ttaatattag
    19021 gcattttacc cattcaaaaa ggtgagattt atattgatgg tgaatcttac aataagaaat
    19081 taacgactga taaaattagt tatgtgtctc aaaaagcatc gtccgttact gcaggttttc
    19141 cagcaaccgt gaaagaggtt gtattgagcg gtcttacacg taggaaaaag ctgtttaaat
    19201 ggtttagtaa agaagacgat cacaaagtgg accaagtatt agaaaggctg aatatctcaa
    19261 cattaaaaca taaaaatatc gcacagcttt ctggtggtca acaacaacgc gtattaatcg
    19321 cacgtgcatt agtgtctgat cctgctgtac tcgttttaga tgaaccgacg aatgggatcg
    19381 atgccaaaca tgtaggtgag ttttatgaaa cattaaatca tctcaaacaa gaaggtgtga
    19441 cgattattct cgtgacacat gatatcggtg tcgttgccga tacagctact gatgtggctt
    19501 gtttaaataa gcatcttcac ttccatggcg cagtcagtga atttaaatca ttagatgaag
    19561 tagaaatatc aaaaatctat ggtcacccca ttaaatttgt agaccataaa catgataggg
    19621 attgttgtgt atgattgatg caatattaaa ttttgaattt atcagatact catttattag
    19681 tgggatactc attggcttga ttgcaccact catcgggaca tttatcgtgg tgaggcgtct
    19741 ctcattgatt gccgatgcat tgagtcacgt cacgttaggc ggtatttcat tcgggatgtt
    19801 tttaattaca ctttctccgc tatttgcatt cgttaatcca atttggacag ggattctatt
    19861 tgcgataatt ggtgcactgc tcattgaata tttgagaact tcatataaaa attatcaaga
    19921 aattgcgata ccgattatta tgagtacagg tattggttta agtgctattt ttatttcgtt
    19981 ggctaaaggg tttaaccaag aacttgtcgg tttattgttc ggttcaatca gtgcggtatc
    20041 cattagtgat ttaattacta ttgtaaccat ctctgtttta gtgttagcgt tcattatgtt
    20101 gttttataaa gagttgttca tcctgtcttt cgatacagaa tatagccaag tgattggcat
    20161 tccgaaatgg atacaatttt tgtttattgt tattgtcgca cttgttattt ctgcatcgat
    20221 gcgtgtcatt ggtgttctgt tagtgagtgc actcattact ttacctgttg ctattgcaat
    20281 gcgttggaca aaagggttta aacaatttat attaataagt atcattatcg gagagttttc
    20341 agttattgta gggctagtta cagcgtttta tttaaatatc tcacctggtg gaatcatcgt
    20401 agttatttta gtcatcatgt taggtttaac acttttctat cagtcctttg ttactggaaa
    20461 gctaaaagga gtgaagcgta atgaaaatgg aagaagccat tcgtatattg aaaaataatg
    20521 ggcataaata tacagataaa cgtcgagata tgattgaaat gtttatcaaa gaagataaat
    20581 atattaatgc aaaaacagtg caacaacaaa tgaacaacca ttatccagga atttcatttg
    20641 atacgatcta tcgtaatctc catctattta aaattttggg gatcattgag ggaactgagt
    20701 tggatggaga aatgaaattc cgtgcggcat gtacgtcaca tcaccatcat cattttattt
    20761 gtactgtttg tggtgatacg aaagtcattg atttttgtcc aatgacagaa attaaagcat
    20821 cattgcctaa tgtagagatt gaaatgcaca aattagaagt atacggtatg tgcgaaaaat
    20881 gtaaataata aaaagcactc aatgtagcat gaagaaacat tgagtgcttt tttaatttta
    20941 gtacaaggac atacacaact gttgttcaaa aatttaatac atccacgacg cgcctgctac
    21001 aattgtaaca gtaaaatcaa atcgtgtatt tgtaagaggg ggcagccttt aggaaacgtg
    21061 aggccagttc agtcaattgc aaatcaatca aatataaaag ctccccacaa aagtaggaag
    21121 ctaaattgtc tttcatatat tttatgtggg aattggaatt tttaattttg agccgcttct
    21181 tgtttcttgt tttcttccca ttcagcagcc aatttatcaa tctccatctt caattcatca
    21241 accattgttt cttcaggaac tttacgcaca gttttacctt tcatgaaaag taatccttca
    21301 cctcgagcac cggcaatacc gatgtctgct tcacgtgctt cacctggacc attaacagca
    21361 cagcccaata ccgcaacttt taatggaatt tgtagttttt cgatgtattc ttcaacttca
    21421 ttcgcaattg aaattaagtc aatttcaata cgtccacatg ttgggcatgc aatcaatgtc
    21481 gctgcgttac ttgcaagacc gaatgatttt aataatgatt tagccacttt gacttcttca
    21541 acagggtctg ctgataaaga aattcgcatt gtgttaccga tacctaaaga taaaatcgca
    21601 cctaaacctg ctgaagattt tactgtacca ttaaacaacg taccactttc tgtaatgccg
    21661 agatgtaatg gatagtcaaa agcttttgct gcttttgtat aggcttcaat agctaagtta
    21721 acgtcactcg ctttcattga gacgataatg tcatggaagt caagttcttc taaaatttta
    21781 atatgatgta aagcactctc taccatacca tctgcagtag ggtatccgta tttttttagg
    21841 atatgctttt ctagtgagcc tgcattcaca ccaatacgaa tcggaatacc ttttgcttta
    21901 catgcctcta ctacagcttc tactttttca cgtctaccga tattacctgg attgatacga
    21961 attttatccg caccgttttc aatcgcaatt aaggcgagtt tataattaaa gtgaatatca
    22021 acgacgagtg gaatattaat ttgtgctttt atatctttaa ttgcatgtgc gtcttcctca
    22081 ttaggacaag caacacgtac aatttgacaa cctgcttctt ctaatcgctt aatttcagct
    22141 actgttgcct caacatcgtg agtttttgtc gttgtcatac tttggataac aacttcatct
    22201 gcaccaccaa tagttagatc accaacttta actggtcgcg tatttttacg atgtgttatt
    22261 tcagccatgt taggaactcc tttataaata attttaactt gaaaatgtac ttctcagaga
    22321 ccattaatca acgttattac atattataca atatgcgtgt gtgtttattc aaaataatat
    22381 gtttaaaacg acgcaaaaat ttcacgatat cgtcattatt ttcatcgata tgataacaca
    22441 tcagtctttt ggagtatttt caatgtgtat gtttaaaaat cc
//
LOCUS       DANHPA010000031        22126 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.031, whole genome shotgun sequence.
ACCESSION   DANHPA010000031 DANHPA010000000
VERSION     DANHPA010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 22126)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22126)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22126
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.031"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            152..346
                     /locus_tag="PTC28_000983"
     CDS             152..346
                     /locus_tag="PTC28_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003234072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HDK5716283.1"
                     /translation="MASPTGLIIISVIALILFGPKKLPQFGRAIGSTLREFKSATEHI
                     TEDDESLDTPSTKSTKQEHK"
     gene            375..1046
                     /gene="tatC"
                     /locus_tag="PTC28_000984"
     CDS             375..1046
                     /gene="tatC"
                     /locus_tag="PTC28_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001807913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HDK5716284.1"
                     /translation="MRARLIKIGMTFGLVLIVVYISSHWWIQPFIHAIAQNGVQLHAF
                     SFTEMIQIYIMIILFCTLCIVSPVIFYQLWAFIAPGLKDIERQFVYKYSLISVLLFLT
                     GIALAYWLIFPLIIQFSFNLSQLMSIDPAIGFKQYLTELLRWLLFFGVIFQLPILFIG
                     LAKFELIDATMLRPYRKYVYFGCFALASLIAPPDVLLNILLSFPLILLFELSMFIIRF
                     TKPYH"
     gene            complement(1089..2747)
                     /locus_tag="PTC28_000985"
     CDS             complement(1089..2747)
                     /locus_tag="PTC28_000985"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HDK5716285.1"
                     /translation="MNIIDQVKQTLIQEIEKSIQQANIVESIPEIKIEIPKDTKNGDY
                     ATNIAMVLTKLAKRNPREIAQLIVDHLDTEAAHVKKIDIAGPGFINFYLDSSYLNAVI
                     DQALELDTQFGRVAESKNKKILVEYVSANPTGDLHIGHARNAAVGDTLCNILDAAGYD
                     VTREYYINDAGNQITNLAKSIEARYLQHLGQKAEMPADGYHGQDIKNIGADLAKKQPN
                     LMDLSDDERLKTFRQLGVDYEMAKLKQDLADFNIHFDNWFSETSLYEKGEIKAVLERM
                     KENGYTYEQDGATWLRTTDFKDDKDRVLIKKDGTYTYFLPDIAYHYDKFQRGNDNLIN
                     LFGADHHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQDGEEVKMSKRTGNAITLRE
                     IMDEVGIDAARYFLTMRSADTHFDFDMALAKEQSQDNPVYYAQYAHARICSILRQAEA
                     QGYQVEKGADYQTITNDKAIELLKKVAEFEPMIEGAAEARAPHRVTNYIQDLAAHFHK
                     FYNAEKVLTEDQAKTKAHLALIDAVRITLRNALQLVGVTAPEQM"
     gene            complement(2749..3159)
                     /locus_tag="PTC28_000986"
     CDS             complement(2749..3159)
                     /locus_tag="PTC28_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000359087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1934 family protein"
                     /protein_id="HDK5716286.1"
                     /translation="MEHNVKIDIHQIVKRDAEKEHFSHQTTGQWLKKGEDWIRYQEQI
                     EDATVNVTVKLTDESVKLIRKGDIHMNMHFIEGQDTTTFYELPHGKMVLTVHTMSILH
                     FVTSDGGKLKVHYALFQGDEKMGTYQYEMKYKEI"
     gene            complement(3375..3890)
                     /locus_tag="PTC28_000987"
     CDS             complement(3375..3890)
                     /locus_tag="PTC28_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YwhD family protein"
                     /protein_id="HDK5716287.1"
                     /translation="MVEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFIDIEAQE
                     AFIDIGAMHARAAVERGVKWITDKETVDVEGAKAYWLCWVTTERGEQGPYYAGVTAAY
                     LLVNKTIRRGYKSMPEHVNMMDKSMKHKVIVDHIGAENRQILADFLKTHNPDMWANAS
                     EALHQAFEDTK"
     gene            complement(3968..5266)
                     /locus_tag="PTC28_000988"
     CDS             complement(3968..5266)
                     /locus_tag="PTC28_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002487628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HDK5716288.1"
                     /translation="MTETAYVTRKLSEEKVFKDPIHRYIHVQDQLIWDLIKTKEFQRL
                     RRIKQLGTLNLAFHTAEHSRFGHSLGVYEIVRRMIDETFKGRPEWDNADRPLAMCAAL
                     LHDLGHGPFSHSFEKIFNTDHEAYTQAIIMGDTEVNVVLRRVSETFPAEVAEVINKTH
                     HNSLVVSMISSQIDADRMDYLQRDAYFTGVSYGTFDMERILRLMRPSADEVLIKESGM
                     HAVENFIMSRYQMYWQIYFHPVSRGGEVVLNHCFKRAKYLYEQGYEFNIPPRDFVPFF
                     ENRATVEEYVQLDEADVTYYLKRWIDEDDPILSDLARRFIHRDLFKFLPFDGSIITIT
                     ELRDLFEQAGIDPDYYFVSDSFSDLPYDYDRPGSNRQPIHLLQNNGGIREISSQSLII
                     SSITGIKREDYKLYYPKELIMKIEDPELKGKIINLLNELN"
     gene            complement(5289..5768)
                     /locus_tag="PTC28_000989"
     CDS             complement(5289..5768)
                     /locus_tag="PTC28_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDK5716289.1"
                     /translation="MYEVRIATPDDVIGIRDVATKAWYNTYLNIYAASTVNELLAASY
                     NEEHLRKRLEEQLFMVAIEGQEVVGFANFIQGSELYLSAHYVRPHSQNKGYGRLLLEQ
                     GLAHYEGQYDAVYLEVDTKNEKGVAFYEQEGFEIIRTYEHVMYGETMNLALMKKPLS"
     gene            complement(6178..6513)
                     /locus_tag="PTC28_000990"
     CDS             complement(6178..6513)
                     /locus_tag="PTC28_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1450 domain-containing protein"
                     /protein_id="HDK5716290.1"
                     /translation="MKNKFLVCDDCQAVNLKTLTQKLKKLDPDAEIEVGCQSYCGPGR
                     RKTFAFVNNRPLAATTEEELMEKVQKQLQKPRDPEEEERLRKRNEERKRRKEEQDRKL
                     KEKLANRKA"
     gene            7135..7851
                     /locus_tag="PTC28_000991"
     CDS             7135..7851
                     /locus_tag="PTC28_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HDK5716291.1"
                     /translation="MKKLCWLFLFFLPCFLLIPFNTAYAKGEQKPVPDTVADPHSKYS
                     AYYQVSLTRSCSAILISSTAALTARHCVGREPAKRSGTIYPGQNLDKSPFGYMNISTY
                     TPHPKYDIAIIKGTLRDQDKFYKYYIRPFTTTVRGYTDQELKGFVRQDVYSYGYPNRK
                     PAPKKVQYRSDGQIYKYVKSPAPSLSTYMPGYSGQSGSGVFKKDGQFIGIISTKTDKN
                     TANVLAFTTDIAKWINENAK"
     gene            8018..8743
                     /locus_tag="PTC28_000992"
     CDS             8018..8743
                     /locus_tag="PTC28_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HDK5716292.1"
                     /translation="MKKLCLLLLLFLSHFLLMPLETTHAKGKQEPVPDTVADSHSKYT
                     VYFQTNSGRYCTAILISSTAALTARHCVGREPAERVGTIYPGASGTKTPFGYMNISEY
                     IPHPNQDLFKKYDIALLKGTERDQDKFYKYYIRKFKTSVTGYTDDQFQKFSGKEIYSY
                     GYPYKGSDFYQYRSDGKITRYVERFKSIQTDLPTVVGQSGSGVFTKNGEFIGIVIEST
                     TDRKGIVLPFTQEIADWINANAN"
     gene            8951..9661
                     /locus_tag="PTC28_000993"
     CDS             8951..9661
                     /locus_tag="PTC28_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like serine protease"
                     /protein_id="HDK5716293.1"
                     /translation="MKKLRLITLLSLVCFIFLPVNTAFAQKGTQVVVPDTVKDPHSRY
                     TAKYESGTHQHCTAILISSTVALTAKHCGGNNRKSFNGTIYPGESGLSTPFGYMNIST
                     YIPNPDYDIAILKGTKQDQSRAYQYYIKNFSTKVSGFTDAEFDGFVNREAYSYGYPYK
                     FSGYKQYRSDGQVTFHQKNPALLRTTLPTHEGQSGSGVFLKNGELTGILITRTQNYEG
                     NILPFTKGIAEWVNKNAS"
     gene            9881..10588
                     /locus_tag="PTC28_000994"
     CDS             9881..10588
                     /locus_tag="PTC28_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HDK5716294.1"
                     /translation="MKKLQLLLLLSLACFVLLPVDTAFAKKGTQEVVSDTVADPHSKY
                     TAKYESGTRRVCTAILISSTAAVTAKHCGGTQRLSPAGTIYPGASGPLMPFGYMNIRN
                     YIPHPTQDIAVIKGISRDQSKAYQYYIRPFTTQVTGYSDDALRGFVGQEVYSYGYPYR
                     DGVFRQYRSDGIIKFYVKPPLLVTDMPALGGQSGSGVFKKDGQFVGIIIGRRSDGEAN
                     VLPFTQEIAEWVNKNAN"
     gene            10811..11530
                     /locus_tag="PTC28_000995"
     CDS             10811..11530
                     /locus_tag="PTC28_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HDK5716295.1"
                     /translation="MKKSCSILLMSLVCFFFFPIDATYAKGTQVLVPDTVADPHSKYT
                     ARYESGTHKQCTAILISSSVALTAKHCGGDHPTTYNGTIYPGESGLSTPFGYMNISTY
                     IPNPDYDIAILKGTEQDKTNAYKYYIKPFKTPVTAFSDETLSSFIGQDVYSYGYPSKY
                     GGYKQYRSDGKMNFYEKNNKLFLTSLPTFEGQSGSGVFKKDGQFVGLLITRTQDYEGN
                     FLPFTQEVADWVNTNSNGPVS"
     gene            11736..12446
                     /locus_tag="PTC28_000996"
     CDS             11736..12446
                     /locus_tag="PTC28_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HDK5716296.1"
                     /translation="MKKLQLLLLLSLACFILSPVDAAFAKKGTQEVVSDTVADPHSKY
                     TAKYESANHSHCTAILISSTVALTAKHCGGDYHTTYNGTIYPGGSGLKTPFGYMNIST
                     YIPNSKYDIAILKGTEKDQSKDYHYYIKPFKTTVAAFSDQELYGIMGLDLYSYGYPYK
                     FSGYKQYRSDGSIYYYYKNAAFVHTSLPTYEGQSGSGAFLKDGRFVGIIITRTEKFEG
                     NFLPFTQEIAEWVNKNAN"
     gene            12665..13375
                     /locus_tag="PTC28_000997"
     CDS             12665..13375
                     /locus_tag="PTC28_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HDK5716297.1"
                     /translation="MKKLHFILLLSLVCFVLLPVDTAFAKKGTQVIVPDTVADPHSKY
                     TAKYESADHSHCTAILISSTVALTAKHCGGNHPTTYNGTIYPGESGLKTPFGYMNIST
                     CIPNSKYDIAILKGTEKDQSKDYHYYIKPFKTAVTGFTDDTLDSFVGLETYSYGYPYK
                     FSGYKQYRSDGEISFYQKNEPILRTTLPTHEGQSGSGAFLKDGRFVGIIITRTQDYEG
                     NVLPFNQEIADWVNKNAN"
     gene            complement(13519..14124)
                     /locus_tag="PTC28_000998"
                     /pseudo
     CDS             complement(13519..14124)
                     /locus_tag="PTC28_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728666.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2812 domain-containing protein"
     gene            complement(14108..14440)
                     /locus_tag="PTC28_000999"
     CDS             complement(14108..14440)
                     /locus_tag="PTC28_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDK5716298.1"
                     /translation="MKKRPQLVPLSETMHYILLALRQPLHGYSVMTYVQELSLGQVQI
                     AAGTLYGALENLSKHGYIQMISDPKERRKVYQITARGEEILKLETERLQHLVSLYQQG
                     GSLDESTL"
     gene            complement(14593..16134)
                     /locus_tag="PTC28_001000"
     CDS             complement(14593..16134)
                     /locus_tag="PTC28_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HDK5716299.1"
                     /translation="MNNPNESRLLTFFTDKKKDPSYTLAQSIGLVLGPLLFALILLFV
                     RPDDLAFKGVYVLAITAWIAIWWITEAIPIPATSLLPLVLLPLGHVMNSATVSAQYGN
                     DIIYLFLGGFILAIAMERWDLHTRIALTIISSIGTSTGRILLGFMVATGGLSMFVSNT
                     AAVMIMIPIGLAIIKEANALKTEADSDESIQKFERSLVLGIGYAGTIGGLGTLIGTPP
                     LIILKGQYATNFGGELSFAKWMIVGVPTVILLLFLAWLYFKFIAFRHDMKTLPGGQKV
                     IKDKLDALGKIKYEEKVVFLVFLLASFLWISREFLLSKWAFTELVADGTIAMFVSILL
                     FLIPAKHQHQRILDWSVAKELPWGVLILFGGGLALAKGIQQSGLAAWLGEQLTLLKGV
                     SPLIIVVVITVFILFLTEITSNTATATMILPILATLSVAIDVHPLLLMAPAAMAANCA
                     YMLPVGTPPNAIVFGTGKIQIKEMAVKGFIMNLISIVVIIVVVYFIMPLVLGIDITHS
                     IPVKK"
     gene            complement(16714..17175)
                     /locus_tag="PTC28_001001"
     CDS             complement(16714..17175)
                     /locus_tag="PTC28_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HDK5716300.1"
                     /translation="MTIVFIFICSFLTSFCFAFVYDAPKRLFLPAGLCGGFGYLTFHI
                     AFEIFSIDSIYASLYGSFVLGIISHVMARQYKSPVILFMVPGIIPLVPGSIFFKATQQ
                     LLTLNFNEASDIFVRATLIAGAIAVGLLISDQVAKSFIRKPIAILKLPAKK"
     gene            complement(17188..17943)
                     /locus_tag="PTC28_001002"
     CDS             complement(17188..17943)
                     /locus_tag="PTC28_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016424348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HDK5716301.1"
                     /translation="MTRYIPTDREVTNLVTLAGRILLECGAEATRVEDTMTRIAQSYG
                     YEETQGYALNIFINFSLSPDHETRMVRIKKNDTNLRNIYLVNHVSRQIARQAIDFKEA
                     YAMLKQLEHKQQRYALGHKMLFAGLISMGFLYLQGATWVDLLPAVLAGAMGYFVTEWM
                     KSKELTLFIPDFLGAIVIGLIAIPLNHWLGSPNIGATITAAVMPIVPGVLITTAIQDL
                     FGRHMLMFTAKFLEAIVTSFAIGAGVTTAFLIL"
     gene            18444..18782
                     /locus_tag="PTC28_001003"
     CDS             18444..18782
                     /locus_tag="PTC28_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HDK5716302.1"
                     /translation="MSIKQFDIIYIDLNPTRGREKQNIRPCLVINNQMMIDGTEFVWV
                     VPIINRELRYPTDIELKTKKGLVSGVIDTIQIRALDLNARQHHYKDALQDNLKSKVLK
                     AIQTYLNPNY"
     gene            complement(18990..19745)
                     /locus_tag="PTC28_001004"
     CDS             complement(18990..19745)
                     /locus_tag="PTC28_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-dependent peroxidase"
                     /protein_id="HDK5716303.1"
                     /translation="MSHAAETLDGWYSLHLFYAIDWASWRLVPQEDRADMIAEFHRLM
                     DRLKQSQSEGQGDQVLYNVTGQKADLLLWVLRPEMKDLTEIENEMNKLAISDHFIPTY
                     SYVSVVELSNYLAGDSNEDPYENPHVKARLYPELPEKEYICFYPMNKRRNETYNWYML
                     SMEERKKLMYDHGMIGRKYAGKIKQFITGSVGFDDFEWGVTLFADDVLQFKKIVYEMR
                     FDETTARYGEFGSFFVGHRLDTARFDALMTIEH"
     gene            19913..20902
                     /gene="pta"
                     /locus_tag="PTC28_001005"
     CDS             19913..20902
                     /gene="pta"
                     /locus_tag="PTC28_001005"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HDK5716304.1"
                     /translation="MSSLLDVLKDKLSGKNVRIVLPEGEDERVLTAAVDLQASDYVAP
                     IVLGDVDKIKALAAEKSLNIEGLNIIQPDTSDLKATLVEQFVERRKGKATEEQAQSLL
                     NDVNYFGTMLVYAGHADGLVSGAAHSTADTVRPALQIIKTKPGVSKTSGIFFMIKEDQ
                     QFIFGDCAINPELAASDLAEIAVESAKTAQSFGMDPRVAMLSFSTKGSAKSDDTEKVA
                     EAVKLAQEKIDAENLSDVIIDGEFQFDAAIVPEVAKKKAPDAKIQGDANVFIFPSLEA
                     GNIGYKIAQRLGGYDAIGPVLQGLNSPVNDLSRGSSTEDVYNLSIITAAQSLQ"
     gene            20902..21738
                     /locus_tag="PTC28_001006"
     CDS             20902..21738
                     /locus_tag="PTC28_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019834666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase family protein"
                     /protein_id="HDK5716305.1"
                     /translation="MDLAHKYFNGHTWRYVDHSSGLEPMQSFAFDDTFSESVGADLSP
                     NVVRTWVHQHTIILGIHDSRLPYLKDGIQYLTDERGYNAIVRNSGGLGVVLDQGILNI
                     SLMFKGKTEVTIDEAFTVMYLLMSQMFEDDFTEIATHEITHSYCPGKFDLSINNQKFA
                     GISQRRVRGGIAVQIYLCVEGSGSERAELMRAFYERALKGEKTKFTYPDIHPSSMASL
                     EELLGRPITVQDVMFKLLYAIKDLGGSLNMDPMTPHEWERYEHYYERMLDRNAKMNAK
                     LD"
BASE COUNT         6840 a         4576 c         3793 g         6917 t
ORIGIN      
        1 catacaagtt tttataatgg caaataattt ttacaattga taggacttta ttatatcatg
       61 gattcatatg atgacttgta tcgctaaagg tgattagaaa aattttaaga gaagaaggat
      121 ttttatgcta gaaggtacgt ttgttttagg tatggcaagt ccaacaggcc tcattatcat
      181 tagtgtcatt gcgctcattt tgtttggacc gaaaaagtta cctcaatttg gtcgtgcgat
      241 cggttcaacg ttacgcgaat ttaaatctgc cacagaacat attacagaag atgacgaatc
      301 attagacaca cccagtacaa aatctacaaa acaagaacac aaatgagtta tcgttactca
      361 atcattttaa cgaactgaga gcacggttaa tcaaaatagg catgacgttt ggcctcgtac
      421 tcattgtagt ctacatttca tcacattggt ggatccagcc attcatacac gctatagctc
      481 aaaatggcgt ccagttacat gcctttagtt ttaccgaaat gatacagatt tacattatga
      541 ttatcttatt ttgtacattg tgtatcgttt ctcccgtgat tttttatcaa ttgtgggcat
      601 ttatcgcgcc aggtttaaaa gacattgagc gccaattcgt ttataaatat agcctcattt
      661 ccgtgctgct gtttttgaca ggtatcgcac tggcatactg gctcattttt ccacttatca
      721 ttcagttttc attcaatttg tcacaattaa tgtcgattga tccagcgatt ggttttaaac
      781 aatatttaac cgaactactg cgatggctac tcttctttgg cgttattttt caattgccga
      841 ttttgtttat cggtttagcc aaattcgagc tgattgatgc gaccatgtta cggccttatc
      901 gtaagtatgt gtattttggg tgcttcgcct tggccagctt gattgcaccg cctgatgtgc
      961 tgttaaatat tttactgtcc tttcctttga tattattgtt cgaactgagt atgtttatca
     1021 ttcgatttac gaaaccttat cattaaaaaa ggcaacttca gcgcgatact gaggttgcct
     1081 tttgtaattt acatttgttc tggtgcagtg acaccgacta attgtaatgc attgcgtaac
     1141 gtaatacgaa cagcatcaat taatgccaaa tgtgcttttg ttttcgcttg atcttctgtt
     1201 aatacttttt ctgcattgta aaacttgtgg aagtgtgcgg ctaagtcttg aatataattc
     1261 gtcacacgat gcggtgctct ggcttctgct gcgccttcaa tcatcggctc gaattccgcg
     1321 actttcttca acaattcaat ggccttatcg ttagtaattg tttgataatc ggcacctttt
     1381 tcgacttgat acccctgtgc ttctgcttga cgtaaaatcg aacaaatacg cgcatgtgca
     1441 tattgtgcat aataaaccgg gttgtcttga gactgttcct tcgcaagtgc catatcaaaa
     1501 tcgaaatgtg tatccgcact gcgcatcgtc aagaagtaac gcgccgcatc aataccgact
     1561 tcatccataa tttctcttaa tgtaatcgcg ttacctgtac gtttactcat cttcacttct
     1621 tcgccatctt gcattaaacg taccatttgc ataatttgaa tttctagacg atcgctatcc
     1681 acaccaaacg tttcgagtga cgctttcaga cggttaatat agccgtgatg atccgcaccg
     1741 aataaattga tcaaattgtc gttaccacgt tggaacttat cgtagtggta cgcaatatct
     1801 ggtaaaaagt atgtgtacgt gccatctttt ttaattaaca cacggtcttt gtcatctttg
     1861 aaatctgtcg tacgtaacca cgtcgcaccg tcttgttcat acgtgtaacc attttctttc
     1921 atacgttcta aaacagcttt aatctcacct ttttcatata aagatgtttc actaaaccaa
     1981 ttatcgaaat gaatgttgaa atcagcaagg tcttgtttta attttgccat ctcataatct
     2041 acaccgagtt gtctaaatgt tttcagacgt tcgtcatccg ataaatccat taagttcggc
     2101 tgttttttag ctaaatccgc accgatattt ttaatgtctt gaccgtgata cccgtctgct
     2161 ggcatttctg ctttttgacc taaatgctgt aagtaacgtg cttcgatcga ttttgctaag
     2221 ttcgtaattt ggttgcctgc atcgttaatg taatattctc ttgtgacgtc ataacctgct
     2281 gcatctaaaa tattgcataa cgtgtcccct actgcggcgt tacgggcatg tccgatatgt
     2341 aagtcgccag tcgggttcgc tgagacatat tccactaata tttttttatt tttcgattct
     2401 gctacacgac caaattgcgt atctagctct aaagcttgat cgatgaccgc atttaaataa
     2461 cttgaatcaa ggtaaaagtt aataaatcct ggtcccgcaa tatcgatttt tttaacatgt
     2521 gccgcttcag tatctaaatg gtccacaatc agttgcgcga tttctctcgg gttacgtttc
     2581 gcgagtttcg tcaacaccat cgcaatattg gtcgcatagt ctccattttt cgtatctttt
     2641 ggaatttcga ttttaatttc aggaatcgac tcaacaatat tcgcttgttg aatacttttt
     2701 tcgatttctt gaatcaatgt ctgtttcact tgatcaataa tattcatctt atatctcctt
     2761 atatttcatt tcgtattgat aggtgcccat tttttcatca ccttggaata atgcataatg
     2821 cacttttaat ttaccgccat ccgatgtcac aaaatgaagg atgctcatcg tatgcaccgt
     2881 caacaccatt tttccatgag gcaattcgta aaaagtggtc gtatcttgcc cttcgataaa
     2941 atgcatgttc atatggatat cgcctttacg aatcaatttg acactctcat ctgtcagttt
     3001 aaccgtcaca ttgacagtcg cgtcttcaat ttgctcttgg taacgaatcc aatcctcacc
     3061 ttttttcaac cattggcccg ttgtttggtg tgaaaaatgt tctttttccg catctctttt
     3121 cacaatttga tggatatcaa ttttgacgtt atgctccatg gtcattttca ccttacttca
     3181 tcaaataata cttgccatta tatcacatct cacatgtact gaacgtataa aatttcacat
     3241 ttgtcgcgtg atttgagacg aaatcatgac aaaaatgcac gaggtgaccc ccttctaaaa
     3301 tcactctgcg taagttattt agaaatcaag tcacctttcg gccggtacga cgtaaactac
     3361 aatgaagtct caccttattt cgtatcttca aacgcttggt gtaacgcttc tgacgcatta
     3421 gcccacatgt caggattgtg cgttttaaga aaatctgcta atatttgacg attttctgca
     3481 ccaatatgat ccacaatgac tttatgtttc atagatttat ccatcatatt gacatgttct
     3541 ggcatacttt tatagccacg acgaatcgtt ttattcacta ataaatacgc cgcagtcacc
     3601 ccagcatagt aaggaccttg ttcaccgcgc tctgttgtca cccaacatag ccagtacgct
     3661 tttgcccctt ctacatcgac agtctcttta tcagtaatcc atttcacacc acgttctact
     3721 gctgcacgtg catgcatagc accaatgtct ataaaggcct cttgcgcttc gatatcgata
     3781 aaaacgggcg caatattatc gagactgatc gaaccaatat ttgtcccttt atgaccatcg
     3841 agtggatcgt tcttgataat attaaagtta aacccttttt tctcaaccat ctcataatac
     3901 ctccaaatct tttcatactt gttaaaatgt atcgttcaag ttgtacatgt attcagcact
     3961 caaacggtta attcagttca tttaataagt taatgatttt ccctttaagc tctgggtctt
     4021 caattttcat aatcagttct ttcgggtaat acaatttata atcttcacgt ttaatccccg
     4081 taatacttga aataattaac gattgactac taatttcacg gatgccacca ttattttgta
     4141 gtaagtggat cggttgtcga ttggaacctg ggcgatcgta atcgtaaggt aaatcggaaa
     4201 atgaatcact cacaaaatag taatccggat caatgcctgc ttgttcaaat aaatcacgaa
     4261 gctccgtaat cgtaataatt gagccatcaa acggtaaaaa tttaaataaa tcgcgatgaa
     4321 taaagcggcg tgccaaatca cttaaaatcg ggtcgtcttc atcaatccaa cgtttcaaat
     4381 aatacgtcac atccgcttca tctaattgga cgtattcttc aacagtcgca cgattttcga
     4441 aaaacggcac aaaatcacgc ggtggaatat taaattcata accttgttcg tacaaatatt
     4501 tcgcacgttt aaaacaatga ttcaagacaa cttcaccacc acggctcacc ggatggaaat
     4561 aaatttgcca atacatttga taacggctca taataaagtt ttcaaccgca tgcatcccac
     4621 tctctttaat caacacttca tctgcagaag ggcgcatcag ccgcaatatc cgttccatat
     4681 caaacgtacc ataagacacc cctgtaaaat atgcatctcg ttgtaaataa tccatacggt
     4741 ccgcatcaat ttgtgacgaa atcatcgaca cgaccaatga attgtgatgt gttttattta
     4801 tcacttctgc cacttcagcc ggaaatgttt cactcacacg gcgcaatacc acattcactt
     4861 ccgtatcgcc cataataatc gcttgggtat aggcttcgtg atcagtatta aaaatctttt
     4921 cgaaactatg tgaaaacggg ccgtgtccta aatcatgcaa caacgccgca cacatcgcga
     4981 gtgggcgatc ggcattatcc cactctgggc gacctttaaa cgtctcatca atcatgcgac
     5041 ggacaatttc gtacacaccg agggaatgac cgaaacgact atgttcagca gtgtgaaaag
     5101 ctaaattcaa tgtcccgagc tgtttaatcc gacgcaaccg ttgaaattct tttgttttga
     5161 ttaaatccca aatcagctga tcttgaacgt gaatatagcg atgaatggga tctttgaaca
     5221 ctttctcttc tgataactta cgtgtaacat aagctgtttc tgtcaatcaa aaccctcctt
     5281 gttcgcattt aacttaatgg ctttttcatg agtgcgagat tcatcgtttc accgtacatc
     5341 acatgttcgt atgtacgaat gatttcaaag ccttcttgtt cataaaatgc gacacctttt
     5401 tcattttttg tatcgacttc taaatagacc gcatcatatt gaccttcata atgtgcgagg
     5461 ccttgttcta aaagtaagcg accgtaccct ttattttgag aatgtgggcg tacgtaatgc
     5521 gcagacaaat acagctcact accttgaata aaattcgcaa aaccgaccac ttcttgccct
     5581 tcaatcgcaa ccatgaataa ttgttcttct aatcgtttac gcaaatgctc ttcgttatat
     5641 gaagctgcga ggagttcatt cacagttgaa gctgcataaa tatttaagta cgtattgtac
     5701 cacgcttttg tcgcaacatc gcggatacct attacatcat ctggtgtagc aattcttact
     5761 tcatacattc cacatttcgc tccttattgc ttgctagaat actttttatt atatcataaa
     5821 tcaaatccta aacagcgcgt aaaatgcttc agattgcaag tgctttcaag tcgtgtagca
     5881 ttgaatgttg atacatagtt ccacaacacc tgtatagaaa attgtcgcta ctttactttt
     5941 cattgcattt tgcttttcat tattaatgat tgtggatatt tcatgcgctt tttacctcaa
     6001 ttcgaatttt tttcaatttc ttcattttag attctttttc ccttagtccc aattttatat
     6061 ccagtctgtt cattttttga tgattaaacg agccttacgc ataaaaaaag agacgtgcct
     6121 tttcaaaatt aaaggggcgt ctctttgcct atgaatatat tgaataagta attggactta
     6181 tgctttacga tttgccaatt tctcttttaa tttacggtct tgctcttctt tccgacgctt
     6241 tcgctcttca ttacgctttc tcaaacgctc ttcttcttca ggatcgcgtg gcttttgaag
     6301 ctgcttctga actttttcca tcaactcttc ttcagtcgtt gcagcaagtg gccggttatt
     6361 aacaaacgca aatgttttac gtcgacctgg tccacaatat gattggcaac ctacttcaat
     6421 ctcagcgtct gggtctagct ttttcagttt ttgcgtcaac gttttgagat tcactgcttg
     6481 gcaatcatcg caaaccaaaa atttattttt cacctcgacg tcccacctct caatttttta
     6541 actctattca ttttactctt ttttctcaat ttttcaaggt agaaatattc aaatagcact
     6601 acgatttgtt aaaatacaca ccctttttcc acaaacctca ttagtcaatt gccataaatt
     6661 tatgcttcaa gtaggtcgtg cttgccacac atcgatgttc aatacgttct catctatctg
     6721 tcattgtacg ctttttgatg cattactaaa ggtaaacaaa cgtctgctcc aaacatagcg
     6781 gtagacgctc acagtaaata tactgcgcat tcttgcagat atgtctattt ttgatggaca
     6841 atcgggattt agtgtcttca aaaagataac ccatttatcg gaattatcgt ttcaagaaac
     6901 cacaattatg taaccaatgt actcgcattt acctaagaca ttgcagcatg gattaataaa
     6961 aatgtgaaat agcaccttac tattttattg cacttcaaaa gaggttggaa ctcaatgttc
     7021 agcccctttc tcactttgta ctttcattcc aaaattccgc atacgtatta tttcataaaa
     7081 ttttaattat tatactttaa tatattaaat atcttatatc aaaggtgtga tcatatgaaa
     7141 aagttatgtt ggttattctt attcttcctc ccatgttttc ttcttatacc ttttaacaca
     7201 gcttacgcca aaggggaaca aaagccggtg ccagatactg ttgcagatcc gcacagtaaa
     7261 tatagtgcat attatcaagt gagcctcact cgtagttgtt cagccatcct tatttcgtca
     7321 actgccgcac tcaccgctag acattgtgta ggacgtgaac ctgcaaaaag aagcggcaca
     7381 atttatccag gacaaaattt agataaaagt ccatttggtt atatgaatat tagcacctac
     7441 acaccacatc caaagtatga tattgcgatc atcaaaggca ctttaagaga tcaagataaa
     7501 ttttataaat actatattag acctttcacg acgacagttc gaggttacac tgatcaagaa
     7561 ctaaaaggtt ttgttcgtca agatgtttac tcctatggtt accctaacag gaagccagct
     7621 cctaagaaag tacaataccg cagcgatggt caaatttata agtatgtaaa atcaccagca
     7681 cctagccttt caacgtatat gcctggttat agcggacaat cagggtctgg cgttttcaaa
     7741 aaagatggtc aatttattgg aattatcagc acaaaaacag acaagaacac cgcaaatgta
     7801 cttgctttta ctacagatat cgccaaatgg attaacgaaa atgcgaaata gtgctttgta
     7861 ttacctttaa ctttcaccca aaagaggttg gaactcaatg ttcggcccct ttctcatttt
     7921 gtactttcat ctcaaaactt caaagagaga acatttcata aaattctaat tattatgatt
     7981 taatatgtta aatatcttat ttcaaaggtg tgattatatg aaaaagctat gtttgttact
     8041 cttattattc ctctcacatt ttctgctgat gcctttagaa acgactcacg ccaaggggaa
     8101 acaagaaccc gtgccagata cagttgcaga ttctcacagt aagtatactg tgtactttca
     8161 aactaattca ggacgctatt gtacagccat cctaatatca tcaactgccg cactcaccgc
     8221 tagacattgt gtaggacgtg aacctgcaga aagagtgggt acaatatatc ctggcgcttc
     8281 gggaacaaaa acgccttttg gctatatgaa tattagtgaa tacattccac atccgaatca
     8341 agatctattt aaaaagtatg atatagcact actaaaagga accgaaagag atcaggataa
     8401 gttctacaaa tattacatta gaaaattcaa aacgtcagtg acaggttata cagatgatca
     8461 atttcagaaa ttcagcggta aagaaatata ctcttatggc tatccttaca aaggaagcga
     8521 tttttatcaa taccggagtg acggtaaaat tacgagatat gttgagcgct ttaaatctat
     8581 tcaaacagat ttaccaactg ttgtaggtca atctgggtct ggggttttca caaaaaatgg
     8641 tgaatttatt ggaatagtta ttgaaagtac tactgaccgc aaagggattg tactcccttt
     8701 tactcaagaa attgcagatt ggattaacgc aaacgcgaat taagaacttg cttcttcatc
     8761 aatttctcta tctctttgat tacgcatact aaaaaataaa agctcgtgca tgatttccaa
     8821 cctcttatct ttgttatgac ttaactacaa taaaaagttc gggttattca tcctaacacc
     8881 actcttttta tttcataact tcataagatt atttatatat tcaatcatat ctaattaaag
     8941 gagtgataat atgaagaaat tacgattaat aacattactg tctctcgtat gctttatctt
     9001 tttgcctgtc aatactgctt ttgcccagaa aggaacacaa gtcgttgtac cagatacagt
     9061 caaagacccc cacagtagat atactgcaaa atatgaatct ggtacacacc aacattgtac
     9121 tgctatactc atttcgtcaa ctgtcgcatt aactgctaaa cattgtggtg gaaataatcg
     9181 caaatctttt aatgggacaa tttatccagg agagtctggg ttaagtacgc cattcggcta
     9241 tatgaatatc agtacctata ttcctaaccc agactatgac atcgcaatat tgaaagggac
     9301 taaacaagac caaagtcgag cttaccaata ctatattaaa aatttcagta caaaagttag
     9361 cggtttcaca gatgccgaat tcgatggttt cgtaaaccga gaggcatact cttatgggta
     9421 tccttacaaa ttcagcggtt ataagcaata ccgtagcgac ggtcaagtta cttttcatca
     9481 aaaaaatccc gctcttcttc gtacgacttt acctactcat gagggacaat cgggatcagg
     9541 tgtgttttta aaaaatggtg aattaaccgg aattcttatc actagaacac aaaactacga
     9601 aggaaatatc ctccctttta caaaaggaat tgcagaatgg gttaacaaaa acgcaagtta
     9661 agctttactg tagacaagtt cactgttttt attttcacat caaagaggct cacagttaat
     9721 ttccaactat tgaatgatgt cacgactgaa atacaacatt taatacttac cgtacattac
     9781 gatttaacat atttgcacac agctgtaact ttgtcctttt atttcatcac ttcacgagaa
     9841 taacaatttc ataaaaagat atcattaaag gagtcacaac atgaaaaaat tacaattgct
     9901 acttttattg tccttagctt gctttgtcct tttacctgtc gatactgctt ttgccaaaaa
     9961 aggtacacaa gaagtcgtct ctgatacagt tgcagatcct cacagtaaat ataccgccaa
    10021 atacgagtct ggtactcgtc gtgtttgtac agccattctc atttcttcaa ctgccgcagt
    10081 gactgctaaa cattgtggag gaactcaacg cttgtcaccc gctggcacga tatatccagg
    10141 cgcatcagga ccacttatgc cttttggtta tatgaatatt aggaactaca ttccacatcc
    10201 aacgcaagat attgcagtaa tcaaaggaat ttcaagagat caaagtaaag cctatcaata
    10261 ctatattaga ccattcacta cacaagttac tggttattct gatgacgcat taagaggttt
    10321 tgttggtcaa gaagtatatt cttatggcta cccttacaga gatggtgttt ttaggcaata
    10381 tcgaagtgat ggcattatta aattttacgt taaacctcct cttcttgtta cggatatgcc
    10441 tgctcttgga ggacaatcgg ggtcgggcgt tttcaagaaa gatggacaat ttgtcggcat
    10501 tatcattgga agaaggagtg atggcgaagc aaatgtactc ccttttactc aagaaattgc
    10561 agaatgggtt aacaaaaacg caaattaagg ttgctgtaat cgtgtaatct tcctattctt
    10621 tatcattcat gccaaagaga ctggtacatc accctatcct cttacttttg ttataactta
    10681 aatgtaaaaa aattgcgtca ttcaccatcg cacgcttttc attttatagc tccacaggat
    10741 tgttatttca taaaatttta aggtgattct tttaatatat taaataatca aatattaaag
    10801 gagtgataac atgaaaaaat catgctcgat actattaatg tcactagtat gctttttctt
    10861 cttccctatt gatgctactt atgctaaagg aacacaagtc cttgtaccag atacagttgc
    10921 tgatcctcac agtaaatata ctgcaagata cgaatctggc acgcataaac aatgtaccgc
    10981 cattctcatt tcttccagtg tcgcattaac tgctaaacat tgcggcggag atcaccccac
    11041 gacatataac gggacgattt atccaggtga atcagggttg agcacacctt ttggctatat
    11101 gaatattagt acctacattc caaacccaga ctatgacatt gcaatattaa aagggactga
    11161 acaagacaaa actaatgctt ataaatacta tattaaaccg ttcaaaacgc cagtgacagc
    11221 gttctcagat gaaacactaa gttccttcat tggccaagat gtttattcct atggttatcc
    11281 atccaaatat ggcggataca aacaataccg tagcgatggc aaaatgaatt tttacgaaaa
    11341 aaataacaaa ctttttctga catcactacc tacttttgaa ggacaatctg gatccggcgt
    11401 tttcaaaaaa gatggtcaat ttgttggact tctcattaca agaacacaag actatgaagg
    11461 aaactttctt cctttcactc aagaagttgc agactgggtt aacacaaaca gtaacgggcc
    11521 tgtatcgtag atggatgatt tttcaacgtt aagcttcaag tctcagcgtc tcatctatga
    11581 atagcgccct tggacgggtg tgatgacttc aatatcgaaa gtggtgagtg ctgtgcaaca
    11641 caattcaact tgttatattt cgttacaact ttacccttat aatttcatat cttcctgaat
    11701 aattattcca taaaaacaat tagaggagtg acaaaatgaa aaaattacaa ttgctacttt
    11761 tattgtcctt agcttgcttt atcctttccc ctgttgacgc tgcttttgcc aaaaaaggta
    11821 cacaagaagt cgtctctgat acagtcgcag atcctcacag taaatatacc gccaaatacg
    11881 aatctgcaaa tcactcgcat tgtactgcca tattgatttc atcaactgtc gcattaactg
    11941 ctaaacattg cggtggagat taccacacaa catataatgg aacgatttac cctgggggat
    12001 cagggttaaa aacacctttt ggttatatga atattagcac ttacattcca aactcgaaat
    12061 atgatatcgc catattgaaa gggactgaga aagaccaaag taaagactat cattattata
    12121 ttaaaccttt caagaccacc gttgcagctt tcagtgacca agaattatac ggtatcatgg
    12181 ggcttgactt atactcgtat ggctaccctt ataagtttag tggttataaa caatatcgca
    12241 gtgatggtag catttattat tattataaaa atgctgcttt tgtccataca tcattaccta
    12301 cttatgaagg acaatcagga tctggcgctt tcttaaaaga tggtcgattt gtaggtatca
    12361 tcatcacaag aacagaaaaa tttgaaggta atttcctccc ttttactcaa gaaattgcag
    12421 aatgggttaa caaaaacgcg aattaatctt tactgtagac aagttcactg tttttatttt
    12481 cacgtcaaag aggctcacac ttaatttcca actattgaat gatgtcacga cttaaataca
    12541 acatgtaata cgcactgtac attgctattg aacatattta cacaactgta actttgtcct
    12601 tattacttca tcacttcact gaattattat ttcattaaaa gacaactatt aaaggagtgc
    12661 tcatatgaaa aaattacact ttatattatt attgtcacta gtctgctttg tccttttacc
    12721 tgtcgatact gcttttgcca aaaaaggaac acaagtcatc gtccctgata cagtcgcaga
    12781 tcctcacagt aaatataccg ccaaatacga gtctgcagat cactcgcatt gtactgccat
    12841 actgatttca tcaactgttg cattaaccgc taaacattgt ggcgggaatc atcctacaac
    12901 atacaatggg acgatttatc caggcgagtc aggattaaaa acaccttttg gttatatgaa
    12961 tattagcact tgcattccaa actcgaaata tgatatcgcc atattgaaag ggactgagaa
    13021 agaccaaagt aaagactatc attactatat taaaccattc aagacagctg ttacaggttt
    13081 cacagatgac acgcttgaca gtttcgtcgg ccttgaaaca tactcttatg gttacccgta
    13141 taaatttagc ggttataagc aatatcgcag tgatggtgaa ataagttttt atcaaaagaa
    13201 cgagcctatc cttcgtacaa cattacccac tcatgaagga caatcaggat cgggtgcttt
    13261 cttaaaagat ggtcgatttg taggaattat catcacaaga acacaagact acgaagggaa
    13321 cgtccttcct ttcaaccaag aaattgcaga ctgggttaac aaaaacgcaa attaggactt
    13381 cgccgtttca cttgtccctt aatactcatg gcaaaaaaga ggctgatgca tcacaatcag
    13441 cctcttcgtt atggggtcaa ctgtaaatta aaacaatgtg ccctactatt ttacacatag
    13501 aaaagatgaa tgttttcctt atacaataag ctctttcaat ttctttttga attgatgata
    13561 cacgacaaat agcggtatca ataaaatgaa ataaaggtag tatcctaaaa agcgcattac
    13621 cgcaaatgga aactcaaaca agtatgcacg ccaaaactgt gcaccttcca tgtcccacaa
    13681 acccggcgtt aaaaaaatgt ctctactgta atgattttgc gtcaagttcg tcacgaataa
    13741 tgcgaaatat actaaaagca aagcatccaa aaatttcagc cagcgtttgt aataattgct
    13801 taaagactct cgatcagaaa acaacacttc tgtctcgtcc cctgccttca tccaatattg
    13861 tttcgtacaa ccgccgcggt acccatatac gtgctcccaa ccaaatgatt cgtataaagc
    13921 aagataatca ttcatttttt ggcggctata aatttcttga taatctaagc gtacgatatg
    13981 cgattcattg gtcttttcga aataataatt gccaaaaaat gacactctgg ttaaacgata
    14041 gccttattga agttgatcat taagccatcg ttcttctttg aggggatcaa aaaaacattt
    14101 ccacttttta taacgtactt tcatctaaag accctccttg ttgataaagt gacactaaat
    14161 gttgcaagcg ttctgtttca agtttcaaaa tttcttcgcc tcgtgctgtg atttggtaca
    14221 ctttgcgtcg ttctttcgga tcgctaatca tttgaatata gccatgttta cttaaatttt
    14281 ctaatgcccc gtacaatgtg cctgcagcga tttgtacttg tcctaaactt aactcttgga
    14341 cataagtcat cacactatag ccatgcaagg gttgtcgtaa tgctaataaa atgtaatgca
    14401 ttgtttcgga taacgggaca agttgaggtc tttttttcat ttatttcacc acacattata
    14461 tagttcaact gtatagtttg attgtatagt tcgactgtat aattgtcaac cagtaaaaaa
    14521 taggcattga acactgtcat ctgtcaatga actcagacaa tggttcaacg cctatggata
    14581 tatgcatttg tattattttt tcactggaat gctatgagta atatcgatac ctaacacgag
    14641 cggcatgata aagtacacga cgacgataat cacgacaata ctaattaagt tcatgataaa
    14701 acctttgact gccatttctt taatttgaat tttacctgta ccaaagacaa ttgcgttcgg
    14761 tggtgtccct acgggcaaca tgtatgcaca gttagcggcc atcgctgcag gcgccattaa
    14821 cagtaatggg tgcacgtcaa tcgctacaga aagtgtcgct aatattggta aaatcatcgt
    14881 agctgtcgct gtattagatg tgatttccgt taagaacaag atgaacacgg taatgacaac
    14941 gacgataata agcgggctga ccccttttaa caatgtcaac tgttcaccga gccaagccgc
    15001 gagtccactt tgttgaatcc ctttagctaa ggctaaaccg ccaccaaata gaatgagtac
    15061 gccccacggt aattctttag cgacagacca atctaaaatg cgttgatgtt ggtgtttcgc
    15121 tggaattaaa aatagtaaaa tggacacgaa catcgcaatc gtaccatctg ccacgagttc
    15181 tgtgaaagcc catttagata ataaaaattc acgtgaaatc cataaaaaac tcgctaataa
    15241 aaagacgaga aatacgactt tttcttcata tttgatttta cctaacgcgt ccaatttgtc
    15301 tttgatgacc ttttgaccgc ctggcaatgt cttcatatcg tgacggaacg cgataaattt
    15361 gaagtacagc catgctaaaa ataacagtaa aatgactgtt ggtacaccga caatcatcca
    15421 tttcgcaaag ctcagttcgc caccaaagtt tgtcgcgtat tgccctttta aaatgattaa
    15481 aggcggtgtt ccaataagcg tacccaagcc cccaatagtg ccggcataac cgataccgag
    15541 cacaagtgag cgttcaaact tttgaatact ttcatcacta tccgcttctg ttttcaatgc
    15601 attggcttct ttaataatcg ccaaaccaat cggaatcata atcattaccg cagctgtgtt
    15661 cgatacaaac atcgataaac cacccgttgc gaccatgaaa ccgagtaaaa tgcgccctgt
    15721 acttgtacca atactgctaa taatcgtgag ggcaatacgt gtatgtaagt cccaacgttc
    15781 catcgcaatg gctagtataa aaccacctaa gaagagataa atgatatcat tcccgtattg
    15841 cgcggacacg gttgcactgt tcatgacatg tcctaacggc aatagcacga gtggcaataa
    15901 acttgtcgct ggaattggaa tggcttctgt aatccaccaa atcgcaatcc aagctgtaat
    15961 cgcaaggacg taaacccctt tgaaagctaa atcatctggt cgaacaaaaa gtaaaatcaa
    16021 tgcaaacaat aatggtccga ggacgagtcc gattgattga gccaatgtgt acgatggatc
    16081 cttctttttg tccgtaaaaa aagttaacaa tcttgattcg tttggattgt tcatgatgca
    16141 tccccctttg ttttcaatag aacaccccaa attgtattaa ttttttaaat agtatagcat
    16201 atttgacgat tgtgtatcta gagtaagtta agcgctttct ttgatggcat atttctattg
    16261 aacaccccat ttaaatatga ttcaatccaa tacagaaaat attcactcaa aaatggacca
    16321 tcatttaaaa aatagggtat tgtgataaag agaacaacga tagcaaagtt tgattgaaaa
    16381 aaacacacaa gttcatgtgt actcagtgcc actggacagc gtgataaaga aggtgatggg
    16441 atggagaaac tcatttatgc acttaaaata ggggtagtct attttttagt ctattgcaca
    16501 gcgcgctatt ttaggcccac atttgattat tttcttgaga ccgtagtgtt ttctttggtc
    16561 gttgcccttt taactgtatt tatttcttta tttttaatcg agaagcccaa aagttaacac
    16621 attactaacg ccagtatagg ttgaagtttc attccctcca tctatactgg cgtttttcta
    16681 gtgatataca gccactaacc tgaaatcttt acactatttt ttagcaggca acttcaatat
    16741 cgcaatcggt ttacgaataa atgacttcgc cacttgatcc gaaattaaca atccgaccgc
    16801 aatcgcgcca gcaatcaatg tagcacgaac gaagatgtca ctcgcttcat taaagttcaa
    16861 tgtcaataat tgttgggtcg ctttaaaaaa tatacttcct ggcactagcg gaataatacc
    16921 gggcaccatg aatagaatca cgggcgattt atattgacgc gccatgacat gcgaaatgat
    16981 gccgagaacg aaactaccat acagactcgc gtatatgcta tcgatgctga atatttcaaa
    17041 agcgatatga aatgttaaat agccgaaacc gccgcataaa ccagccggta aaaacaaccg
    17101 tttcggcgca tcatatacaa atgcaaaaca aaaagaggtt aaaaagctac atatgaaaat
    17161 aaatactatc gtcatggttg ccacctccta caagatgaga aacgctgtcg ttacacctgc
    17221 accaatcgca aatgatgtga caatcgcttc taaaaatttg gcggtaaaca tcagcatgtg
    17281 acgtccgaat aaatcttgaa tggctgtcgt aattaagacg cccggcacaa tcggcatcac
    17341 cgctgcagta atggtggcac cgatattagg actacccaac caatgattta acggtatcgc
    17401 aattaaccca atcacaatgg cgcctaaaaa gtcgggaata aataatgtga gttctttact
    17461 tttcatccat tctgtcacga aatagcccat tgcgccggca agcactgcag gaagtaggtc
    17521 aacccatgtg gcaccttgta aatataaaaa gcccatcgag atcagtcccg caaacaacat
    17581 tttgtgcccc aatgcatacc gttgctgctt atgttctaat tgtttcaaca ttgcataagc
    17641 ttctttaaaa tcaatcgcct gccgtgcaat ttgacgcgaa acgtgattca ctaaataaat
    17701 attccttaaa ttcgtgtcgt tctttttaat ccttaccata cgtgtttcgt ggtccgggga
    17761 taatgaaaaa ttaataaaaa tattgagcgc ataaccttgt gtctcttcat atccgtaact
    17821 ttgtgcaatt cgcgtcatcg tatcttccac acgcgtcgcc tcagcaccac attctaataa
    17881 aatacgccct gccaatgtca ccagattcgt aacctctcga tctgtgggta tgtatcgcgt
    17941 catctccgtc acctactttt atgtatttct atctgcatcc aaattggaaa ggcctatact
    18001 ctgccactta gtttaaaaat tataaccgat ttgcgttgag attgctatga tagatgataa
    18061 cgccactcac ccctatcaaa atagatgtat cgcttatagc ataatcattt cctcaaacct
    18121 ttcacttttt gtatttacat aagtaagtac ttttattgta atatgtttat ggagatgata
    18181 aaaatgactc aaacatttaa cgatgtaagt aaatcgaccg aacgcatttt aaaaacggaa
    18241 atagtcaagc tatgagttaa agtaaaaaaa cgattcaatc cgttgatttt gagattggcg
    18301 atacagttga agtacaaaaa ataaatggcg ggctgttcat tactaaaaaa gaagtatcta
    18361 tatagtatca aaaacttctt ccaaaatggt agtaagtatc aagaatcaga agtagagttc
    18421 ggcgaaagtg tgggtcgtga aatatgagta ttaaacaatt tgacatcatt tacattgatt
    18481 taaatccaac tcgcggtcgt gaaaaacaaa acataagacc ttgtttagtg atcaataacc
    18541 aaatgatgat tgacggcact gaatttgtat gggttgtacc tatcataaat cgtgagttgc
    18601 gttatccaac cgatatagaa cttaaaacca aaaaaggact ggtatctggc gtgatagata
    18661 cgattcaaat acgtgcttta gacttaaacg ctcgccaaca tcactataaa gatgcattac
    18721 aagacaatct aaaaagtaaa gttttaaaag caatacaaac atatttaaat ccaaactact
    18781 aaaatgtgat agaaattttt aaaaaatata gtaatagaaa ggattaaaca atcaaacgtc
    18841 atgattgctt tgataatact taagtctaat ggaaattcca ggcaacgatt aattcacaag
    18901 accatttaat ccagcgaaaa tgatcgattt ttcttccata tcaaaaaaga cagtgtcgcc
    18961 cttatatcga cgtacactgc ctcccttcat taatgttcaa ttgtcattaa cgcatcaaaa
    19021 cgtgctgtat ctaaacggtg accaacgaag aagctgccaa attcaccgta acgtgcagtc
    19081 gtttcatcaa agcgcatttc ataaacgatt tttttgaatt ggagcacgtc atctgcaaat
    19141 agcgtcacgc cccattcaaa atcatcgaaa cctactgaac cagtaatgaa ctgcttaatt
    19201 ttacctgcat atttacgacc aatcatcccg tgatcgtaca ttaatttttt acgttcttcc
    19261 atagataaca tgtaccagtt atatgtctca ttacgacgtt tattcatcgg atagaaacag
    19321 atgtattctt tttctggtag ttctgggtac aatcttgctt tcacatgtgg gttttcgtat
    19381 ggatcttcat tggaatcccc tgcaagatag ttacttaatt ctacaacaga tacgtatgaa
    19441 tacgtcggaa tgaaatggtc tgaaatagct aacttattca tttcgttttc aatttcagtt
    19501 aaatctttca tttctggacg taacacccat aacagtaagt ctgctttttg acctgttacg
    19561 ttatataaca cttggtcacc ttgtccttct gattgcgact gtttcaaccg atccattaaa
    19621 cgatgaaact cagcaatcat gtctgctcta tcttcttgtg gcactaaacg ccaagatgcc
    19681 caatctatcg cataaaataa atgtaaacta taccaaccat ctaaagtctc cgctgcatga
    19741 ctcattcaga acactcctta gaattaatat tatctgtaca aactaaattt tatcataaat
    19801 aattcagaca caacgattta aatgattaca aattagtgtc atggaaatct cactataaat
    19861 gccgtataat aataggtgga aaatcgatga aggaaagcag aggaggacca ttatgtctag
    19921 tttattagat gtacttaaag acaaactttc aggtaaaaat gtgcgtatcg tattaccaga
    19981 aggagaagat gagcgtgtat taacagccgc tgttgattta caagcttctg actatgttgc
    20041 gccgatcgta ttaggggatg ttgacaaaat taaagcactt gctgcagaaa aatctttaaa
    20101 tattgaaggt ttaaatatca tccaacctga tacgagcgac ctaaaagcaa cactcgttga
    20161 acaatttgta gaacgtcgta aagggaaagc gactgaagaa caagcacaat cgttattaaa
    20221 tgatgtgaac tacttcggta caatgcttgt ttatgcaggt catgctgacg gtttagtgag
    20281 cggtgcagcc cactcaacag cagacactgt tcgtccagcg cttcaaatta tcaaaacaaa
    20341 accaggtgtt tctaagacat caggtatttt cttcatgatt aaagaagatc aacaatttat
    20401 tttcggtgac tgtgcgatta accctgaatt agccgcatca gacttagctg aaattgcggt
    20461 tgaaagcgcg aaaactgcac aaagcttcgg catggaccca cgcgtggcaa tgttaagctt
    20521 ctcaacaaaa ggttctgcaa aatcagacga cactgaaaaa gttgctgaag ctgtaaaatt
    20581 ggcacaagaa aaaatcgacg ctgaaaactt atcagacgtc atcattgatg gtgaattcca
    20641 atttgacgct gcaatcgtac cagaagtggc gaagaaaaaa gcacctgatg caaaaatcca
    20701 aggtgacgcg aatgtattta ttttcccaag tcttgaagca ggtaacattg gttacaaaat
    20761 tgcgcaacgt ttaggcggtt atgatgccat tggtcctgtc ctacaaggtt taaactcacc
    20821 tgtgaatgac ttatcacgcg gtagctctac agaagacgtt tacaacttat ctattattac
    20881 agcagctcaa agtttacaat aatggattta gcacataaat attttaatgg tcacacatgg
    20941 cgctatgtgg accattcttc tggtttagag cccatgcagt ctttcgcatt tgacgacacc
    21001 ttttcagaaa gtgtcggtgc ggacttatct cctaatgttg tgcggacatg ggtacatcaa
    21061 catacgatta ttttaggcat tcacgactca cgattacctt atttgaaaga cggcattcaa
    21121 tatttaacag atgaacgtgg ctataatgcg attgtgcgta actcaggcgg tctcggtgtc
    21181 gtcttagatc aaggcatttt aaatatttcc ttaatgttca aagggaagac tgaagtgacc
    21241 attgatgagg catttacagt catgtatttg ttgatgagtc aaatgtttga agatgatttt
    21301 acggagatag cgacacatga aattacgcat tcgtattgcc caggcaagtt tgatttaagt
    21361 atcaacaatc aaaaatttgc cggtatttca caacgccgtg ttcgtggtgg gatcgccgtt
    21421 caaatttact tgtgcgtcga aggttcagga agtgagcgtg cagaactgat gcgtgccttt
    21481 tatgaacgcg cattgaaagg tgaaaagacg aagtttactt atccagacat tcatccatct
    21541 agtatggcgt cattagaaga attacttggc cgtccaatca ccgtgcaaga tgtcatgttt
    21601 aaactactct atgcgattaa ggatttaggt ggcagtttaa atatggatcc aatgacccca
    21661 cacgaatggg aacggtatga acattattat gaacgcatgc tcgatcgtaa cgcgaaaatg
    21721 aatgcaaaat tggattaaat caaaaccacc cgtgtgaacg ggtggttttg atttgagtcc
    21781 aaaagcatct gttactggcc atcactttta agggctctga gaaaatcagc caactgtact
    21841 actttctcag cgatccttaa aagtattcta tttttcctca actttttatt atcatcccct
    21901 gtaaattgta aatggttcta tgtattccat aattgtgagc tgttctacta cgatatcctc
    21961 ttgtagttga tttcgaatac attcttctat taccttttta tttcttccaa ccgtatctac
    22021 ataaaaacct atgcaccaaa attttctatt cccataccta tgtttcaaat gtgcatgttt
    22081 atcaaaaaca ttaaacacat tgaatctaca cttatttctt atgata
//
LOCUS       DANHPA010000032        21985 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.032, whole genome shotgun sequence.
ACCESSION   DANHPA010000032 DANHPA010000000
VERSION     DANHPA010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 21985)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21985)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21985
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.032"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            248..748
                     /locus_tag="PTC28_001007"
     CDS             248..748
                     /locus_tag="PTC28_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1440 domain-containing protein"
                     /protein_id="HDK5716306.1"
                     /translation="MRQRQWGMLLFTGIIGGILSGIVKLGWEVMFPPRTPERNATNPP
                     QELLQQMGFSHDFTHQTYTFSHMDLPWVSFIVHFSFSIVIALIYCMLVKKYAAVAMGY
                     GAVFGIVIWVFFHLILMPLMHTVPAPWNQPFQEHLSELFGHIVWMMTIEGARQLYFYK
                     HQSELQ"
     gene            complement(802..1635)
                     /locus_tag="PTC28_001008"
     CDS             complement(802..1635)
                     /locus_tag="PTC28_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autolysin"
                     /protein_id="HDK5716307.1"
                     /translation="MLKGFTTMALSTVMTLSTLCFATTNVARTFFTTAFASTTSLQTT
                     ILNPQPMPNHQNLTLQSEQQQSRSSSEAFPPIPYPDVNQYIMKNHIPHSPVVKDARMN
                     TLPKIPYKYGTYIGVVIHEVGEDDRTLPQWVDRMYRTYDRAFVHAFVDEKEIRLTAPS
                     HYLAWGAGKQANPYFYHIELVRVYSFDDFARSVNNQAWLAAYMLKQQNIEPTLADDQE
                     GVGSVISHYAIMKYWGGTTHTDPIAYYNRWNYNMEKFFELVKYHYEQMEDHEVVTDKE
                     E"
     gene            2230..2553
                     /locus_tag="PTC28_001009"
     CDS             2230..2553
                     /locus_tag="PTC28_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4870 domain-containing protein"
                     /protein_id="HDK5716308.1"
                     /translation="MSTTTEKLLAFLSYFSVFFAPVLFPLIVWLVAPQPVSTHGKKAL
                     IYHILPTVFSIIAFACFMVLFNTSGAVLTTLLVIVIIITIVGSLYYLVYNLYAGIKVL
                     VVDQL"
     gene            2780..3653
                     /locus_tag="PTC28_001010"
                     /pseudo
     CDS             2780..3653
                     /locus_tag="PTC28_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220079.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
     gene            3650..4381
                     /locus_tag="PTC28_001011"
     CDS             3650..4381
                     /locus_tag="PTC28_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5716309.1"
                     /translation="MIKHYFLTELRLLTRHKTRFVLAVLLPVTFYLLFTSILDLPQPI
                     MAKFNQEYMYNMTTFSLMSFCLFSFPFDIIDERTRGWYKRLMRTPLTPAHYIGIKIGK
                     TMCQFALSIVIIFTIAAQFKGVQMAWTQWVSSGVLIWFGASLMLSMGALLAQMNDVQK
                     ASGVGNILYLALAVLGGLWFPVSQFPTLMQHVALVTPTYHLKQLSYTVSLHQSFPLTS
                     LIVLLVYCIIFLTLALYIRQRSETI"
     gene            4378..5478
                     /locus_tag="PTC28_001012"
     CDS             4378..5478
                     /locus_tag="PTC28_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDK5716310.1"
                     /translation="MIKKLDLHYLNLSSLLYLLFPILNLWNPYIFGRHDVLVVVTCLF
                     VIVYTTLVVCHPLLSYGLMYTLLVLQYAGVIYFVYALNPMNALFLFYSAFAIPYVFKA
                     NVWSKEYVTFITTMVLCIIVSLIYYPDYYYTIALLIFFTVINLMMFANFKKIEQAHYQ
                     HEIEAKNKQLNFLIAEQERNRIGQDLHDTLGHVFAALSLKSEPALKLIDTKPDRAKTE
                     IQSLNDISKETLNQIRAIINDLKIPSFAEEVASVETLLKDANLEFHFEGVQFAYALNP
                     AKQGLLAMVLREAMNNIIKHADATTVHVALSETTDGLQLDIQDNGCGIRDKSPIHLQS
                     IQARVEVLKGQLHIENNEGLHIQILIPRSVAL"
     gene            5475..6077
                     /locus_tag="PTC28_001013"
     CDS             5475..6077
                     /locus_tag="PTC28_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002439610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDK5716311.1"
                     /translation="MIRVVLAEDQTMLRQAMVQLMQLHDTIHVVADVGNGQAALETVQ
                     TTPVDVIILDVEMPGLTGLEVLQHIRAQAIDVKVIIVTTFKRPGYFETAVAHDVDAYV
                     LKERSVDELVQTIHHVIAGQKEYSDALMTSLVTERNPLTDKEQLVLKEIGKGLTSKEI
                     AQTLYLSDGTIRNYTSTIIDKLQADNRFDAWKKAHDKGWI"
     gene            complement(6205..7077)
                     /locus_tag="PTC28_001014"
     CDS             complement(6205..7077)
                     /locus_tag="PTC28_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDK5716312.1"
                     /translation="MKKFWKWSIGIVILLIVVWVTYIAIYRNTSIANNPKHAKYIDSA
                     TPTLFLHGYGGTVNSEKFLVKEAENQGVTQDVITAHVNEAGEVKLKGHLDSDAINPIV
                     QVVLKENKEVDPDVNAEWFKNVLVALQTKYHIKNFNFVGHSMANMTFAQYMATYGKDT
                     ALPQLQRQVNIAGTFNGVLHMNEEVNEITLDAEGKPSRMNPPYQDLRVLKDVYKGKNI
                     DVLNIYGDLKDGTHSDGSVSNASSRSLKYLLGGSAKTYRESEYVGPSAQHSELHDNEK
                     VARELIQFLWGKSL"
     gene            complement(7195..7674)
                     /locus_tag="PTC28_001015"
     CDS             complement(7195..7674)
                     /locus_tag="PTC28_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArgR family transcriptional regulator"
                     /protein_id="HDK5716313.1"
                     /translation="MKKSKRLDLVSMVVKEHDIHTKAEIVDYIEQHFGIRYSLATISR
                     DLNELKIYKMPSENQQRCYRQYNDNAPKEAKARLIDLYQEEIISLSIKDTYLIIKTTP
                     GFAQTVNFYIDQMNLKEVIGTIGGNDTILVITHSNELSKFVHYKLFDQTYETPHVKH"
     gene            8062..9297
                     /gene="arcA"
                     /locus_tag="PTC28_001016"
     CDS             8062..9297
                     /gene="arcA"
                     /locus_tag="PTC28_001016"
                     /EC_number="3.5.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase"
                     /protein_id="HDK5716314.1"
                     /translation="MEKNPIQVNSEIGTLKTVLLKRPGKELENLVPDHLSGLLFDDIP
                     YLKVAQEEHDKFAQVLRDEGVEVVYLEQLAAEAIADKAVREQFIDDILAESQKTVLGH
                     EKEIKALFKNLSDQELVDKIMAGVRKEEIQLEMNHLVEYMDDRYPFYLDPMPNLYFTR
                     DPQASIGRGMTINRMYWRARRRESIFMTYILAHHPRFKDADVPVWLDRNCPFNIEGGD
                     ELILSKEVLAIGISERTSAQAIERLARQILFDDQSTFTKVLAIEIPNSRSFMHLDTVF
                     TMIDYDKFTMHAAIFKEENQMNIFTIEKDETKQDIRISHSSQLKQTLEDALHVDNIQF
                     IPTGNGDAIDGAREQWNDGSNTLTIRPGVVVTYDRNYVSNQLLREHGVKVIEITGSEL
                     VRGRGGPRCMSQPLYREDI"
     gene            9334..10341
                     /gene="argF"
                     /locus_tag="PTC28_001017"
     CDS             9334..10341
                     /gene="argF"
                     /locus_tag="PTC28_001017"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDK5716315.1"
                     /translation="MTDIQKPLNLKGRHLLKEDDFTKKEFSDLIDFAMTLKSYKQQGI
                     PHRYLEGKNIALLFEKTSTRTRAAFTVASIDLGAHPEFLGKNDIQLGKKESVEDTAKV
                     LGRMFDGIEFRGFSQATVEALAKYSGVPVWNGLTDAWHPTQMLADYMTIKENFGHLEG
                     IQLTYIGDGRNNVANSLLVAGPMLGVDVTICTPKSLFPAQDYIDIAERRAKQDGGSIK
                     ITDNIDEGVKGADVIYTDVWVSMGEESEFESRIQLLKDYQVNRALFDKTGKDDTIFLH
                     CLPAFHDTETVYGQKIKEEHGLTEMEVTDEIFRSPHSKVFDQAENRMHTIKAVMAATL
                     G"
     gene            10462..11892
                     /gene="arcD"
                     /locus_tag="PTC28_001018"
     CDS             10462..11892
                     /gene="arcD"
                     /locus_tag="PTC28_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine-ornithine antiporter"
                     /protein_id="HDK5716316.1"
                     /translation="MGGTEENKLNKTSLIGLVIGSMIGGGAFNIISDMGSHAGGLAII
                     LGWLITAVGMISLAFVFQNLTNERQDLDGGIYSYAQAGFGDFIGFSSAWGYWFAAFLG
                     NVAYATLLMSAVGNFFPTFEGGNTLPSIIIASLLLWGVHYLILKGVETAALINSIVTI
                     AKLIPILLVIVCMIVAFNFDTFKTGLLGMTSHPSQGFSWGDTLSQVKSTMLVTVWVFT
                     GIEGAVVFSGRAKNKKDVGSATVIGLVSVLVIYFLMTVLAQGVIQQNHISALSNPSMA
                     AVLEHIVGHWGAVLVNIGLIISVLGAWLGWTLLAGELPFIVAKDGLFPKWFAKENQNK
                     APSHSLLITNILVQIFLISMLFTQSAYQFAFSLASSAILIPYTLSAFYQVKYTVQTKQ
                     RATTKQWLIGIIASIYTIWLVYAAGLDYLLLTMLLYVPGLVVYTIVQRNNQKPLKQID
                     YIFFMLILLLAIIGIVRLLTGAIDVF"
     gene            11908..12849
                     /gene="arcC"
                     /locus_tag="PTC28_001019"
     CDS             11908..12849
                     /gene="arcC"
                     /locus_tag="PTC28_001019"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HDK5716317.1"
                     /translation="MHKKVVIALGGNAIQTTDGSSEAQKKAIRATMQTLKPLFKTDYD
                     IVISHGNGPQIGNLLIQQQKADSPETPAMPLDTCGAMTQGMIGFWIETEVNRVLAEVN
                     RDRRAATVITRVEVDINDPRMAHPTKPIGPFYTEAEIEKVKNENPQSIYKEDAGRGYR
                     KVVPSPLPVSILEHQLISTLVENNNIIIACGGGGIPVVKKDDTYEGVEAVIDKDFASE
                     RLAQLIDADVLMILTNVENVYLNFNQPDQKQLTQIDVASLKQYARDGNFAEGSMRPKI
                     EAAINFVENGEGRRAVITNLDKAYEAFKGKAGTQIYQ"
     gene            12868..13596
                     /locus_tag="PTC28_001020"
     CDS             12868..13596
                     /locus_tag="PTC28_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HDK5716318.1"
                     /translation="MGEKSYNYTIIDTSLIQNDIHTFLEQFAAFINIPSIVLQPYKNE
                     FIVRQYNKGQVIYYSSDELTHIYFLIDGYIVRDHYNIHGDLYRVINKDQQLYPLHNLF
                     QDKVTHEICSALTDCIVMTIPIDLIEYLCKNHHKVFIQLFKYLCESEQQLTEYNMALT
                     AKHAKSRVIKVLIYLCHTIGDDHDEFYEIKPFLTIQMVSDLASVSRETTGHIINALKA
                     ENLLVKNKKNWLFSKVLVDQHEDD"
     gene            14106..14815
                     /locus_tag="PTC28_001021"
                     /pseudo
     CDS             14106..14815
                     /locus_tag="PTC28_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220080.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent protein deacylase"
     gene            complement(14978..15448)
                     /locus_tag="PTC28_001022"
     CDS             complement(14978..15448)
                     /locus_tag="PTC28_001022"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase"
                     /protein_id="HDK5716319.1"
                     /translation="METIYLAGGCLWGVQAFVKTIPGVVMTEAGRANGYSAILDGPYD
                     GYVECVKTIFDPSKIDVTRLIDDLFEIIDPYSLNQQGEDVGPKYRTGIYSEQSHHLIE
                     ARQYIQNRADAEYIMLEVAPLTNYIPSADVHQDHLDKYPNDYCHIPDVLMRKYR"
     gene            complement(15696..16862)
                     /locus_tag="PTC28_001023"
     CDS             complement(15696..16862)
                     /locus_tag="PTC28_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArgE/DapE family deacylase"
                     /protein_id="HDK5716320.1"
                     /translation="MSVLSADEKIQILRDIIEIQSVNDYEVEVAQYLKNLFDKYQINA
                     QILKLENSETRANLVAEIGSGHPVLGVSGHMDVVNVGDITTWQYEPFQLTEDEDGRLH
                     GRGTADMKAGLAALVISMIEIKEAGLLKKGTIRLLATAGEEIASEGAAQLREQGYTDD
                     LDALLIAEPSQNGMFYAHKGSMHFELTSRGKSAHSSMPELGINAITPVVNFIYHLNEA
                     FQHVHERNHIIGPPTMASTVIQGGDQVNSIPDKATALFNVRTVTEYNSQSFMALFQSI
                     QERVSDDHHRLTLQAYGDRSPVVTTGENRLVNLAQDISEKYFGEKVKKIASTGVTDAS
                     LLLKDKDIHFPFITFGPGETSQAHQVDEYVQKDVYLTFIQLYQEMFTTYLNDEK"
     gene            complement(17428..18561)
                     /locus_tag="PTC28_001024"
     CDS             complement(17428..18561)
                     /locus_tag="PTC28_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HDK5716321.1"
                     /translation="MTLQGIDFLPPQVTLENALDLYKSVAEINSLIGALNTQINHSLV
                     STQMIQLLTLSESVQSTRIEGTQVTFLDIIEETPNEQKSTEVTEVLNYKDALDYGVMQ
                     IKNGNPITTRLIHELHKILMGRNTRGTTVSSGEFRKIQNFIGPSSNIKDAVYIPVPAH
                     EIDDYMTNWEHYINRVKHPSFNQVLKEGYTLLDEQSDPLIKTAIMHAQFESIHPYLDG
                     NGRLGRILIVLNMMAESAVNAPIFFVSEELERERLRYYNLLNSVRGSHADWYKWIHFY
                     LRACQRMILNLQTKLENIETLAKEGLKKINQAAGSKIMDVWFYTFTTPNVTVKYAAKS
                     LNMSENTARMHLNTLVELGMIDVDHARKRNKVYVNYDLLQILR"
     gene            complement(18753..18949)
                     /locus_tag="PTC28_001025"
                     /pseudo
     CDS             complement(18753..18949)
                     /locus_tag="PTC28_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008297710.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(19075..19431)
                     /locus_tag="PTC28_001026"
     CDS             complement(19075..19431)
                     /locus_tag="PTC28_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002467555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716322.1"
                     /translation="MKRLVVSALFSMIFYLSGVSHFKKEAMFLKIVPSYLPFKRAIVK
                     YSGILELMIAVYVLLGKNRRAVRKIVQGFLWLVFPANIYAARKRMSYKDESSSVIQHV
                     IRLPLQFVAIKLAKWL"
     gene            complement(19442..20446)
                     /locus_tag="PTC28_001027"
     CDS             complement(19442..20446)
                     /locus_tag="PTC28_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002434486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HDK5716323.1"
                     /translation="MNNEQIVLATRPKGVPQDDVFRFETIDVKAPEAGEIQIESIYIS
                     VDPYMRGRMNDTKSYIQPYALDEPLKGHIVGKVQQSNHEQFSVGDYVTGILPWRRINT
                     VSGESVTRLDVRDVPLYLYLSVLGMPGMTAYTGLLQIGKPQANETVVVSAASGAVGSV
                     VGQIAKIKGARVVGIAGGEKKTAYLTNELGFDAAIDYKSSDFATQLEAAVPDGVDVYF
                     ENVGGAVSDEVFKHLNQFARVPVCGAISSYNADVEELGPRIQGTLVKNQALMQGFVVA
                     QFSDYFKEAQEQLSQWITEGKIKAEFTIDEGFDQVPTAFRKLFTGENFGKQIVKVAEE
                     "
     gene            complement(20450..21115)
                     /locus_tag="PTC28_001028"
     CDS             complement(20450..21115)
                     /locus_tag="PTC28_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017723717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDK5716324.1"
                     /translation="MKSLIIGANGGVGQHLVRKLKVRQMDFTAGVRNMSQVETLKSKG
                     IDAVYIDVEKQSIDELATQFKQFDQILFSVGSGGSTGADMTMIVDLDGAIKAIKASEQ
                     VGNQHFIMVSTYDSRREAFDASGDLKPYTIAKHYADVYLRQTNLKYTIVHPGALTNEP
                     ETQKFQISEQFKGVQHPTVTREDVAEVLVSVLSDKSLQGREFQIINGELPLTEAIQKY
                     LEE"
     gene            complement(21140..21820)
                     /locus_tag="PTC28_001029"
     CDS             complement(21140..21820)
                     /locus_tag="PTC28_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HDK5716325.1"
                     /translation="MKKTLIVVTNISKYPDTERATGAWFSEVTHFAKDFYDAGYEVDL
                     VSPKGGYVPLDPASLNSEMMTAEDWAYYTDSNYMNQFGHSLSPEEVNPDEYSAIYFAG
                     GHGVVWDLRDNPQLNEIALSIYNNNGVLASVCHGAVGLIDIKENGENIVKGKAVTGFT
                     NSEEQANGTTPYMPYLLEDELVHVGAQFKKEADWQSYAVIDGRIVTGQNPQSGHAVAE
                     NVLKLLTK"
BASE COUNT         6579 a         4470 c         3930 g         7006 t
ORIGIN      
        1 tttgtttatg ttgtatcttc caactatatt gatgaacgtt aaaggtcctc cctactgcga
       61 atcacataac attaaagtta catccatacg ctctcgttat aacttttggt cacaaactcg
      121 attgaacttt gtgtttcacg ccatttttcg ccatcaaacg ttcaaaatta tcctaaaata
      181 atatattgat aaaattttca catatcgcta tactttgaat atctgataca atgaggaggt
      241 cctgataatg agacaacgac aatggggtat gttgctcttt acaggtataa ttggaggtat
      301 attatctgga atcgttaaac tcggctggga agtcatgttt ccaccgcgta caccagaaag
      361 aaatgcgacg aatccaccgc aagaattgtt acaacaaatg ggattcagtc atgatttcac
      421 acatcaaact tatacatttt cgcatatgga cttgccgtgg gtgagcttta tcgttcattt
      481 cagtttttca attgttatcg ctttaattta ctgcatgtta gtgaaaaagt atgcagccgt
      541 cgctatgggt tacggggctg ttttcgggat agtcatttgg gtgttcttcc atttgatttt
      601 aatgccactg atgcacactg ttcctgcacc atggaatcag cctttccaag agcatttatc
      661 tgagttattc ggacatatcg tttggatgat gacgattgaa ggtgcccgtc aactttactt
      721 ttataagcat caatctgaac ttcaataaaa taaacacggg ctaggacatc ttgacgtttt
      781 cctagcccac ccttcttatt ctcattcttc tttatcagtc acaacttcgt gatcttccat
      841 ttgctcataa tgatatttca ctaactcaaa gaatttttcc atgttgtaat tccatctatt
      901 ataatacgcg atagggtctg tatgcgttgt gccgccccaa tatttcataa tcgcataatg
      961 actaatgact gaacctaccc cttcttgatc atccgcgagt gttggttcaa tattttgttg
     1021 tttcaacatg tatgctgcga gccatgcttg gttatttact gatcttgcaa agtcatcaaa
     1081 gctgtatacg cgtacaagct caatatgata aaaataggga ttggcttgtt tccccgctcc
     1141 ccaagctaga tagtgagatg gtgcagtgag acgaatttct ttttcatcta caaatgcgtg
     1201 gacaaatgcg cgatcatacg tccgatacat acggtccacc cattgcggta acgtgcggtc
     1261 atcttcaccg acttcatgga taacgacacc gatatatgta ccatatttat acggaatttt
     1321 agggagtgtg ttcatacgtg catcttttac aactggagaa tgagggatat gatttttcat
     1381 aatgtattga ttgacatcgg gataaggaat tggaggaaac gcttctgacg atgagcgcga
     1441 ttgttgctgt tcactttgaa gggtcaagtt ttggtggttc ggcataggtt gagggtttag
     1501 tatagtggtc tgcaagctag ttgttgatgc aaaagccgtt gtaaaaaaag ttcgtgcaac
     1561 atttgttgtg gcaaagcata atgtactcag tgtcattaca gtagacaatg ccatcgttgt
     1621 aaaaccttta agcattttaa ccacaccttt ctatcttttt aattatttaa aatatagata
     1681 atcctataac acttttatat aaaagatata acgccgttcc ttgttaaagt caatactcta
     1741 tcgattgtcg ataaattatt ttatgttgag atatcgctca ttttcctttc tcatcgtagt
     1801 gtttatgtta ttttctccat tcatttttgt aagtacactg agtatatgat tgttcatctg
     1861 cacgtttgaa tttatatacg cctctttatc tttggtgtac ttcggattat gattttcaat
     1921 gacaaaagtt caacacgcat cttaataagg tcacccttgc tatcaaacaa aatatgatat
     1981 ttttaatcca ttccgctaca gtgctaagta ttttccatta ttatgattaa ttgatacttt
     2041 aaactaaggc tccattttga tatcaacaac tttgaggtgc agttcacatc aaaacgactc
     2101 acttttgagg aaacgtttaa cagacgcggt agtgtggaaa acataaaagg tatattttgt
     2161 aaaactctaa aataatcatc tcaatccaaa gaaagttatg attataatga caaaaaggag
     2221 agtgacacaa tgtcaacgac aacagaaaaa ttattagctt ttctttcata ttttagcgta
     2281 ttttttgcac cggtgttatt tccattgatc gtatggttgg ttgcaccaca gcctgtgtca
     2341 acacatggaa agaaagcatt gatttatcac attttgccga ctgtattttc catcatcgct
     2401 ttcgcttgtt tcatggtgct ctttaataca agcggtgcgg tgctgacaac tttactcgtg
     2461 attgtcatca ttattacaat tgtcggttct ctctattact tagtgtataa cttgtatgct
     2521 ggcattaaag tattagttgt tgaccaactt taattgatgt ctctatacac attctattgg
     2581 cgacaataat tgagactttt acttgctttt aggctcggac attgatttgt tcgggctttt
     2641 gatttccact ttaacctctt catctcgctt ccactccaaa ttagtgacaa atgtcatatg
     2701 aatctcgtga caaacttcac tactacgcgc gcaactacaa acatacaata aacataacct
     2761 atccaaggat gtgatttata tgattcgaat agcgcattta acccaaacct atcaccaaaa
     2821 acctgttgtg aatgacgtct cttttccaat tcgtaccggc caatgtaccg cacttattgg
     2881 tccaaatggc tctggaaaaa ccacgcttat tgatatgatt atcggtgacc gtcatcctgt
     2941 acaaggcacg attgaagatc ctgaccatct tttaacctct gaacggttag gcgtgctgtt
     3001 tcaacaaagt cactttccag aacgtatgaa agtcattgaa ctgtatcact tgtttgcaca
     3061 ttgttatccg tcgcccttac cttttgaaga atgggtggcc cttacacggt ttacaaaaaa
     3121 acagctccac caatttgcga ctcaactttc aggtgggcag caacgcattc ttgactttgc
     3181 gttaacactg gtcggtcaac cgcaatgtct tattttagac gaaccgacaa gtgcaatgga
     3241 tgtcgaaatg cgtcaacatt tctggtccat tattcgtcag ttgaaagcaa atggacgtac
     3301 gattttatat acgtctcatt acatagaaga agtggagcaa atggcagatc gtgtcattgt
     3361 actcaatcaa ggatgtttag tgatggatga tacacctcaa aatattaaac gtaaacaagg
     3421 ccattccatc atcacattac cgataccacc atctgaagca ctgatattac agttgtctcg
     3481 catcaaaccc atgccaacaa atggatggtc aacttcaaat tgaaacagcg gatgtgcagc
     3541 aaacattaat cgagttactc gcactccata ttcctttgca acatattgaa attcatcacc
     3601 attcactact cgagattata ttcaaacagg accaaggcgg tgtatcacaa tgatcaaaca
     3661 ttattttttg acagaactcc gactactcac gcgacacaaa acacgctttg tacttgccgt
     3721 tctattgcca gtcacattct atttattatt tacatccatt cttgacctac ctcaacctat
     3781 catggcaaag tttaatcaag aatatatgta caatatgacg acatttagtt taatgagttt
     3841 ttgcttgttt tctttccctt ttgacattat tgacgaacgc acacgcggat ggtacaagcg
     3901 actcatgcgc acaccactta cacccgcaca ctacatcggt ataaaaattg gtaaaacgat
     3961 gtgtcaattt gcactgtcga ttgttattat ttttacaata gctgcacagt ttaaaggcgt
     4021 acaaatggcg tggacgcaat gggtgagttc aggagtttta atttggttcg gggcgagtct
     4081 catgttgagt atgggggcat tacttgcaca gatgaatgat gtccaaaagg cgagtggggt
     4141 cggcaacatt ttgtatttag ctctagccgt tctcggtggt ctgtggtttc cagtgtcaca
     4201 atttccgacc ttaatgcaac atgtcgcact agtcacaccg acctatcacc ttaaacagtt
     4261 gtcttacacg gttagtttgc atcaatcttt tccactgaca tctttaatcg tattattggt
     4321 atattgtata attttcttaa cacttgcact ctatattcga caaagaagtg aaacgatatg
     4381 attaaaaagt tagatttaca ttatttgaat ttatccagtt tactttattt actctttccg
     4441 atacttaact tatggaatcc atacattttt gggcgtcacg atgttttagt cgttgtgact
     4501 tgcctctttg tcattgtcta tacgaccctt gtagtgtgtc atccattact gtcttacggt
     4561 ctgatgtata cgttactcgt ccttcaatat gcaggtgtta tttatttcgt atacgcgctt
     4621 aacccgatga atgcactgtt tttgttttat agtgcttttg cgattcctta cgtttttaaa
     4681 gcaaatgtat ggtccaaaga atatgtgacg ttcattacta cgatggtgct ttgtatcatt
     4741 gtgtcgctta tttattatcc agattattat tataccatcg ccttattaat ctttttcact
     4801 gtgattaatt taatgatgtt tgcaaacttt aaaaaaattg agcaagcaca ttatcaacac
     4861 gaaatcgagg ctaaaaataa gcagttgaac tttttaattg ctgaacaaga acgtaaccgc
     4921 atcgggcaag atttacatga tacactcgga cacgtttttg cggcattaag cttaaaatcc
     4981 gagccagcac tgaagttgat tgatacgaag ccagaccgtg caaaaactga aatacaaagc
     5041 ctaaacgaca tttcaaagga aacactcaat caaatacgtg ccattattaa tgatttaaaa
     5101 atcccgtctt ttgcggaaga agtggcatct gtagagacgt tgttaaaaga tgccaatttg
     5161 gaatttcatt ttgaaggcgt acaattcgca tatgcattga atccagcaaa acaaggatta
     5221 ctcgcgatgg tactccgcga agcgatgaac aacattatta aacatgccga cgcgacaaca
     5281 gtccatgtgg ctttatccga aacgactgac ggattgcagc tcgacatcca agataatggt
     5341 tgcggcattc gagacaagtc ccctattcat ctccaaagca tacaagcccg tgtcgaagta
     5401 ttaaaagggc aattacatat agaaaataat gaaggactac acatacaaat tctaataccg
     5461 aggagtgtgg cactatgatt cgcgtcgtgt tagctgaaga tcaaacgatg ttacgtcaag
     5521 cgatggtcca actgatgcaa cttcatgaca ctattcatgt tgtggctgat gtgggcaatg
     5581 gacaagctgc tctagaaacc gtccaaacaa cacctgttga tgtgattata ttagatgtcg
     5641 aaatgcctgg attaaccggc cttgaagtat tacaacacat tcgtgcacaa gccatcgatg
     5701 tgaaggttat tattgtcact acatttaaac gtccaggcta cttcgaaaca gcggtggcac
     5761 acgatgtcga tgcatatgta ttaaaggaac gttccgtcga tgagctcgtt cagacgatac
     5821 atcatgttat agcaggtcaa aaagaataca gtgacgcgtt aatgacctcg cttgtgacag
     5881 agcgcaatcc tctcactgat aaagaacaat tggtattgaa agaaattggc aaagggctga
     5941 cgagtaaaga aattgcgcaa accctatatt tatcagatgg cactatacgc aattatacat
     6001 cgaccatcat cgacaaactc caggcagaca accgcttcga tgcatggaaa aaagcgcatg
     6061 ataaaggatg gatatagcac gagactctac tttggcacat atctaccata cattcaccta
     6121 tcctaaaaaa cgaccacgca catcttccta tacgtgcggt ggtcgtttca tgttcattca
     6181 gttgtcatca ttttcaaatg catttcacag tgatttaccc cacaaaaatt gaatcagttc
     6241 acgcgcaact ttttcattat catgcaattc actatgttgc gcacttggac cgacatattc
     6301 agattcacga tacgttttcg cactgccccc aagtagatac ttcaatgaac gagaagacgc
     6361 attcgataca ctgccgtcag agtgcgtacc gtcttttaag tctccgtaaa tgttgaggac
     6421 atcaatattc ttccctttat acacatcttt taatacacgt aaatcttgat aaggtgggtt
     6481 catacgacta ggtttgccct ccgcatcaag cgtgatttca ttcacttctt cattcatatg
     6541 cagcacgccg ttaaacgtcc cagcgatatt cacttgacgt tgcaactgtg gcaatgcggt
     6601 atctttacca tacgtcgcca tatactgcgc aaaagtcata tttgccattg aatgtccgac
     6661 aaaattaaag tttttaatgt gatattttgt ttgtaaagca actaacacat ttttaaacca
     6721 ttctgcattc acatctgggt ctacttcttt attctctttc aatacgactt gtacaatagg
     6781 attaatcgcg tcactatcca aatgtccttt taatttcact tcacccgctt cgttgacgtg
     6841 cgcggtaatg acgtcttgcg tgacaccttg attttccgct tccttcacta aaaacttttc
     6901 agagttcacc gtcccgccgt aaccatgcaa aaataacgtc ggtgttgcgc tatcaatgta
     6961 cttggcatgt tttggattat tggcgataga tgtattgcgg tagatggcta tatacgtcac
     7021 ccacacgaca atcaatagta tcactatacc aatactccat ttccaaaact ttttcatgga
     7081 tgtcacctct ttatacgccc tcgatgcact ctcatcgatg ttgactaaat ttacctgatt
     7141 ctattgcaaa atccatgaaa agtcaatttt gtgcaatttt cctatatatt aagactagtg
     7201 tttcacatgt ggcgtttcat acgtttgatc gaacagtttg taatgtacaa atttggaaag
     7261 ttcattcgaa tgcgtaatca ctaatatcgt atcattaccg cctatcgtcc cgatcacttc
     7321 ttttaaattc atttgatcga tataaaaatt caccgtttgc gcaaaaccgg gtgtcgtttt
     7381 aataattaag tacgtatctt taatactgag ggaaattatc tcctcttgat acaaatcaat
     7441 gagtcttgct ttcgcttctt ttggtgcatt gtcgttatat tgtctgtaac atcgttgttg
     7501 gttttctgat ggcattttat aaatcttcaa ctcatttaaa tctcgactaa tcgtagcaag
     7561 actgtatcgg atgccaaaat gctgttcaat ataatctaca atttctgctt tcgtatgaat
     7621 atcgtgttcc tttacaacca tcgatactaa gtctaatctc ttactcttct tcatactttt
     7681 aaactcctta atctgatgat aagtcagtca gacaaccata cacatcatta tcataacaaa
     7741 atatgatatt ctcagatgtg aactttttgg cacctctcaa aacgcccttt tcatattcat
     7801 cagacgcacc tccccatcaa atggatatcc atacatcata ttgaatgaag caccatcttt
     7861 cattgcgcgc ctcacgacat attcaatgat tattcattct tatggaccat tcaagtactc
     7921 agcatgtata atctatcaat tttgtgcatt gaatacatga tttatatgaa gtattagaca
     7981 ttgttattga gaaaaaattc acaacacata taaagaaagc gctttatact ttgggtgtat
     8041 taaaacaaag gaggcgcaac aatggaaaag aatcctattc aagtcaatag tgaaatcggg
     8101 acattaaaaa cggttttact gaagcgacct ggcaaagaat tagaaaatct tgtgcccgat
     8161 catctaagcg gattactgtt tgatgatatt ccttatttaa aagtagccca agaagaacac
     8221 gacaaatttg cacaagtatt aagagatgaa ggtgtcgaag tcgtctatct cgaacaatta
     8281 gccgctgagg caattgctga caaggctgta cgcgaacaat ttattgatga tattttagca
     8341 gaatctcaaa aaacggtgct cggtcacgaa aaagagatta aagcactttt taaaaattta
     8401 agcgaccaag aactcgtcga taaaattatg gccggcgtgc gtaaagagga aattcagctc
     8461 gaaatgaatc acttagtgga atatatggac gacagatatc cattttattt agaccctatg
     8521 ccgaatctgt atttcacaag agatcctcaa gcttctatcg gccgaggcat gacgattaat
     8581 cgcatgtatt ggcgtgcacg tcgcagagaa tcgattttca tgacgtacat tctcgcacat
     8641 caccctcgct ttaaagacgc agatgttccg gtttggttag accgaaattg tccattcaac
     8701 attgaaggcg gcgatgagtt aattctttca aaagaagtgt tggccattgg tatttcagaa
     8761 cggacgtcag cacaagcgat tgaacggtta gcccgtcaaa ttttattcga tgaccaatca
     8821 acatttacga aagtgttggc gattgaaatt ccaaacagtc gtagtttcat gcatttagat
     8881 acggtattta cgatgattga ttacgacaaa ttcacgatgc atgccgctat ttttaaagaa
     8941 gaaaatcaaa tgaacatctt tacgattgaa aaagatgaga caaagcaaga tattcgaatt
     9001 tcacattcaa gtcaattaaa gcaaacactt gaagatgcgt tacatgtcga caatatccaa
     9061 ttcatcccga caggtaacgg cgatgcgatt gacggtgcac gcgagcaatg gaatgatggt
     9121 tcaaatacat tgacgattcg tcctggtgtt gttgtgacgt atgaccgcaa ttacgtttcc
     9181 aaccaactat taagagaaca tggtgtcaaa gtaatcgaaa ttactggtag tgaattagtg
     9241 cgcggtcgtg gtggcccaag atgtatgagt caacctttat acagagaaga catttaaata
     9301 ttttatcatc ttattataga aaggattttc aaaatgacag acattcaaaa accattaaat
     9361 ttaaaaggca gacatttatt aaaagaagac gactttacga aaaaagaatt ctcagactta
     9421 atagactttg cgatgacatt aaaatcctac aaacaacaag gaatccctca ccgctattta
     9481 gaaggtaaaa atattgcttt attattcgaa aaaacatcga cacggacacg cgccgctttt
     9541 accgttgctt ctattgattt aggggcacac cctgaatttt taggtaaaaa cgacattcaa
     9601 ttaggtaaaa aagaatctgt agaagatact gctaaagtgt taggccgtat gtttgatggc
     9661 attgagttcc gtggcttttc acaagcaact gtagaagcat tagcaaaata ttctggtgtc
     9721 cctgtatgga acggactcac tgacgcttgg catccgactc aaatgttagc cgactatatg
     9781 accattaaag aaaactttgg acatttagag ggtattcaac tcacgtatat tggcgatggc
     9841 cgcaacaatg tcgctaattc acttcttgtg gcaggtccga tgttaggcgt cgacgtgacg
     9901 atttgtacac caaaatcttt attccctgcg caagactata ttgatatcgc tgaacgtcgt
     9961 gctaaacaag atggcggttc aattaaaatt actgacaata ttgatgaagg tgttaaaggc
    10021 gcagatgtca tttatacaga cgtttgggtg tctatgggtg aagaaagtga atttgaatca
    10081 cgtattcaat tattaaaaga ttatcaagtg aatcgcgcat tattcgataa aacaggtaaa
    10141 gacgatacga ttttcttaca ttgtttacct gcattccacg atacggaaac ggtctatggt
    10201 caaaaaatta aagaagaaca cgggctgact gaaatggaag tgactgatga aatctttaga
    10261 agtcctcatt ccaaagtctt tgatcaagca gaaaaccgca tgcatacaat caaagctgta
    10321 atggccgcaa cattaggata gttcaataga tttgatataa ttcaaaagtc cagacatact
    10381 tattacaatg aaataatatt aaaatcattt aaaataatat taaaactgga cttttgattc
    10441 tatctaaagg agacatgaca tatgggcgga acagaagaaa ataaattaaa taaaacctcc
    10501 ttaattggtt tagtcattgg ctcgatgatt ggtggcggtg cattcaacat catttcagat
    10561 atgggcagtc acgctggcgg attagcgatt attttaggtt ggctcattac tgcagtcggt
    10621 atgatttcac ttgcctttgt ctttcaaaac ttaacgaatg agcgacaaga tttagacggt
    10681 gggatttaca gctatgccca agcaggtttt ggtgacttta tcggcttttc gagtgcttgg
    10741 ggctactggt ttgcggcgtt tttaggcaat gtggcctatg cgactttact catgtctgca
    10801 gtcggcaact ttttcccaac ctttgaaggc ggcaacaccc ttccttctat tattatcgcg
    10861 tccttattat tgtggggtgt gcattacctc attttaaaag gcgtcgaaac tgctgcactc
    10921 atcaacagta tcgtaacgat tgctaagtta atccctattt tacttgtcat tgtatgtatg
    10981 attgttgcct ttaattttga tacgtttaaa acaggactgt taggaatgac aagtcaccca
    11041 tcacaaggat ttagttgggg agatacactc tctcaagtta aaagtactat gctcgtaacg
    11101 gtttgggtct ttactggtat tgaaggtgcc gttgtctttt ctggacgcgc taaaaataaa
    11161 aaggatgtcg gttcagcaac cgtcatcgga ttagtttctg tattagtcat ctatttctta
    11221 atgaccgtct tagcacaagg tgtcatccaa caaaatcaca tttcagcact ttccaatcct
    11281 tctatggccg ctgtgttaga acatatcgtc ggacattggg gagctgtact cgtgaatatc
    11341 gggctgatta tttcggtttt aggtgcatgg ttaggttgga cactgttagc cggtgaatta
    11401 ccgttcatcg tcgcaaaaga tgggctattc ccgaaatggt ttgcaaaaga aaatcaaaat
    11461 aaagcaccga gtcattcatt attaattacg aatatattag ttcaaatctt tttaatcagt
    11521 atgctgttca cacaaagtgc gtatcaattt gcgttttcac ttgcatccag cgccatttta
    11581 attccatata cattgagcgc gttttaccaa gtgaagtata ccgttcaaac gaaacagcgt
    11641 gcgacaacaa agcaatggct gattggtatc atcgcatcga tttatacaat ttggctcgtt
    11701 tatgcagctg gattagacta tttactatta accatgttgc tttatgtacc tggactggtc
    11761 gtttatacga tcgtacaaag aaacaatcaa aaacctttaa aacaaatcga ttatatcttt
    11821 ttcatgctta ttttattatt agcgattatc ggcatcgtca gactactcac tggtgccatc
    11881 gatgtatttt aatgaggagt gatttttatg cataaaaaag ttgtgatagc tttaggtggc
    11941 aatgcaattc aaacgacaga tggatcttca gaagctcaaa agaaggcgat acgtgcgacg
    12001 atgcaaacac tgaagccatt atttaagacc gactacgata tcgttatctc tcatggtaat
    12061 ggaccgcaaa ttggtaacct tcttattcaa caacaaaaag cggatagtcc tgaaacccct
    12121 gcgatgccac tcgatacatg tggcgcgatg acacaaggga tgattggctt ttggatagaa
    12181 accgaggtga atcgtgtatt agcagaggtg aatcgcgacc gtagagcagc aaccgtgatt
    12241 acacgtgtgg aagtggatat caatgatccg agaatggcgc atccaacaaa accgattggc
    12301 ccattttata ctgaagcaga aatagaaaaa gttaaaaacg aaaaccctca gtccatctat
    12361 aaagaagatg ctggaagagg ttatcgtaaa gtggtccctt ccccgctccc tgtatccatc
    12421 ttagaacatc aactgatcag tacgttagtt gaaaacaaca acatcattat cgcttgtggc
    12481 ggcggtggaa ttcccgtagt caaaaaagat gatacgtatg aaggtgtgga agccgtcatc
    12541 gataaagact tcgcaagtga acgtttagca cagcttattg atgcggatgt actgatgatt
    12601 ttaacgaatg ttgaaaacgt ctacctcaac ttcaatcaac ctgatcaaaa acaactgact
    12661 caaattgatg tcgccagttt gaaacaatat gcacgtgacg gtaattttgc agaaggttca
    12721 atgcgcccta aaattgaagc ggctataaat tttgtggaaa atggagaagg gcgtcgtgca
    12781 gtgattacaa acttagacaa agcctacgag gcctttaaag gaaaagccgg cacacaaatt
    12841 tatcagtagt cataaggtgg tgcttatatg ggggaaaagt catacaatta cacaataatc
    12901 gatacctccc taattcaaaa tgacattcac acatttttag aacaattcgc tgcctttatt
    12961 aatattcctt cgattgtctt acaaccttac aaaaatgaat ttatcgtaag acagtataac
    13021 aaaggccaag tgatatatta ttcatcagat gaactgacac atatttattt tttaatcgat
    13081 ggttatatcg tacgagacca ttacaatatt catggtgacc tctatcgtgt gattaacaaa
    13141 gatcaacaat tatatccgct tcacaatcta tttcaagata aagtcacaca tgagatttgt
    13201 tctgcgctca ccgactgtat tgtaatgacc atccctatcg atttgataga atatttatgc
    13261 aaaaaccatc acaaagtgtt cattcagctg tttaaatatt tatgtgaaag tgaacaacaa
    13321 ctgactgaat acaatatggc actcactgct aaacatgcca aatctcgggt gattaaagtg
    13381 ctcatttatt tatgtcatac cattggcgac gatcatgacg agttttacga aatcaagcct
    13441 tttttaacga ttcaaatggt gagtgacctt gcaagtgttt cacgcgaaac aaccggacat
    13501 attatcaatg cgttgaaagc agaaaacttg ctcgtcaaaa acaagaaaaa ttggttgttt
    13561 agtaaagtac tggttgatca acatgaagat gattgaaaac taagattgag actcgcacta
    13621 aaaattgagc tgacttaaca atattatgta tccttgtcct cataatatgc atactatatt
    13681 tttacgatgg cattcatggt ttcgctttcc aagggacttg cctcaactta attcggcttg
    13741 attaaagggt tcgctaggtg ggtgccgaat taaattttcg gctgcgtctg atccccctag
    13801 gagtctcagc catatggtca atctttcatc aaataggtag gataagaata agttcctgaa
    13861 tggagaaaag caaatttttt actacatcat ccatatttac tttcaatcat ttgtttaatc
    13921 taaaatgaag acgaggctgg gatagcatga tttcccggtc tctttctgtg ttgaaatata
    13981 tatgattgtc tcactactca ccttgaattg tcggtacaac catcgttcgc acccccgcgc
    14041 ctattttgtt gtgatatgac ttttgataaa atgaaagtga cattgataaa tggagtgatt
    14101 caactatggc acatcatatc gatcaattaa aacatatcat cgaccactca gaacgcatcg
    14161 tatttttcac gggtgcaggt gtatcagtcg caagtggtgt cccggatttc cgttcaatgg
    14221 gtggtttgtt tgatgaaatt tcaaaagaag gctactcacc ggaatatttg ttgagcaccg
    14281 attatttaga agatgaccca attggtttta tgcgcttttg tcacaaacgt ttactcttgg
    14341 aggataaatt gccgaattag agcaacgtca acactcatta ggtgtcatca cgcaaaatat
    14401 tgatggcctt catagtgatg caggaagcca acatgtcgat gaattacatg gcacactcaa
    14461 tcgcttttac tgtccgaatt gtcagcaaca gtacacgaaa aatgaagtca tgacacatca
    14521 actgatacaa tgccaacaat gtggacatgt gattagaccg gatatcgtcc tttatggcga
    14581 aacgctggat caaacgacaa tgtccaacgc acttcagaaa atcacacatg ctgatacatt
    14641 gattgtgttg ggctcatcgc tcgtcgttca acctgcagct ggactcattt cacattttca
    14701 aggtggacat cttgtcatta ttaacaaaga cactacccct tatgatcaac aagctaatct
    14761 ggttattcat aatgatatgg tctctattgt tgaggagctc ataagaaacg gatgacctta
    14821 tggtacctat tgcgggggaa tatggcgcat tgattatgat ttgaaaacac aacactttta
    14881 taggtgttat gttcggtgat ggcgatcttt cattaaatct atgtgccata accattgtga
    14941 tttctaaaat atacagtatc aatggctttt taacacgcta tcgatatttt ctcatcaata
    15001 catctggaat atgacaataa tcattaggat atttatcaag gtgatcttga tggacgtccg
    15061 cacttggaat atagtttgtc agaggtgcca cttctaacat aatgtattcg gcatcagctc
    15121 ggttttgaat atattgtcgg gcttcaatta aatggtgaga ctgctcgcta tagatacctg
    15181 tacggtattt cggcccaacg tcttcacctt gttgattgag gctatacgga tctatgattt
    15241 caaataagtc gtctattagg cgagtcacat caatttttga cggatcaaat attgttttga
    15301 cacattcaac gtagccatca tacggcccat ctaatatcgc actgtaccca ttagcacgac
    15361 ccgcttctgt cataacgaca cccggtatgg ttttgacaaa tgcttgtacg ccccataaac
    15421 atccgcctgc aagataaatg gtttccatca gtttcacttc ctctctaaag attcattaaa
    15481 aaatgagcat caaatctgaa tgagaaagat taacgctcaa ttaaatcatc acacactaca
    15541 taagatgcac ggtctaggcg cctcatcaat taaatactca aatcaaaatc aggcgcattg
    15601 taaatcgtca tcctctccac aatacgcctg aatgaagcca ctatttaatg ctcccacata
    15661 catgaagcgc gattaagtat acgctttttc aacctttatt tttcatcatt caaataagtt
    15721 gtaaacattt cctgatataa ctgaataaaa gttaaataaa cgtctttttg gacatattca
    15781 tcaacttgat gggcttgtga tgtttcacca ggtccaaagg ttataaatgg aaaatgaata
    15841 tctttatctt ttaataaaag cgatgcgtcc gtaacccccg ttgaagcaat ctttttaact
    15901 ttttcgccaa agtatttttc gctgatatct tgcgcaaggt taacaagacg attttctcct
    15961 gtagtgacaa caggtgagcg gtccccatat gcttggagtg tgagacgatg atgatcatca
    16021 cttacacgtt cttgaatcga ttgaaataac gccataaaac tttgactatt gtattctgtc
    16081 accgtccgta cattgaataa ggctgttgct ttgtctggaa tagagttcac ctgatccccg
    16141 ccttggataa ccgtagaggc cattgttggc gggcctatga tatgattacg ttcatggacg
    16201 tgttgaaacg cctcattcaa atgataaata aagtttacaa caggtgtaat ggcattgatc
    16261 cctaactctg gcatagagct gtgcgcagat ttacctctgg atgttaattc gaaatgcata
    16321 gaccctttat gtgcgtaaaa cataccattt tgtgaaggtt ctgcaatcaa taaagcatcc
    16381 aaatcatcag tataaccttg ttctcttaat tgcgctgccc cttcactggc aatttcttca
    16441 ccagccgttg ctaatagacg aatcgtccct ttcttcaata atcccgcttc tttaatttca
    16501 atcatactta ttacgagtgc tgcgagacct gctttcatat ccgctgtgcc acgaccatgt
    16561 aatcggccat cttcatcctc cgttagctga aatggttcat attgccatgt tgttatatct
    16621 cctacattca ctacatccat atgacctgaa acaccaagaa cggggtgccc tgagccaatt
    16681 tctgctacta agttcgcacg tgtctcacta ttttctagtt ttaaaatttg agcattaatt
    16741 tgatatttat caaacaaatt ttttaaatac tgagccactt caacctcata atcgttaact
    16801 gactggattt cgatgatgtc acgtaaaatt tgaatttttt catctgcact taaaactgac
    16861 atatccgtca catcctttca aaaatgcgtt aagtagattc gtctaaaata ttgttcactg
    16921 tcctcccaat cttaacgctt atgatacaaa cttattgtct caaaaagggg ggtgaattac
    16981 aatttggggt gcttatttaa ctaaatgtat tcatgtcact ttcttaattc acctttgaaa
    17041 ttaaaaaaac acttctatac aagatgagcc acaaaagagt tggctatatt aataatttta
    17101 ccttcctaaa aacgttttag catttttaaa catgaatttt tctttttgtt catccgcgat
    17161 aaagtctact ggcaaaattt cacgctctca aacaattatt cttagttcat agtcagcaat
    17221 atcatcgttt acattacaac ttcatcagtt aatttgcttt ccaataaaaa aaccccacat
    17281 cactcttaac gcaaaaaaca cgaaattttg cgttaagaat atgcggggtt tttatcagtt
    17341 cttttgagaa atgctgtcat atcaacgttt ttaagtattt agctcctttt ttgaatactt
    17401 atcttacaca cgagcccttg tgttaactta tctaagaatt tggagtaaat cataattcac
    17461 atacacttta ttacgttttc gcgcgtgatc cacatcaatc attcctaatt caacaagtgt
    17521 gttcaaatgc attctggcag tgttttcact catattcaaa cttttagctg catatttaac
    17581 agtcacatta ggtgttgtaa acgtgtaaaa ccatacatcc atgatttttg agccagcagc
    17641 ttgattaatt ttcttaagcc cttctttagc taatgtttcg atattttcga gctttgtttg
    17701 tagattgaga atcatgcgtt gacaagcccg caagtaaaaa tgaatccatt tgtaccaatc
    17761 ggcatgagaa cctctgacac tattcaacaa attgtagtat cgtagtcttt cacgctctaa
    17821 ttcttcactc acaaaaaata ttggcgcatt cacagcactt tcagccatca tatttagcac
    17881 aattaatatt ctaccgagac gtccattacc atctagataa ggatgaatag attcgaactg
    17941 tgcgtgcata attgcagttt taatcagcgg gtcagattgt tcatctaaaa gagtgtatcc
    18001 ttccttgagc acttgattaa aactaggatg tttaacacga ttgatgtaat gttcccagtt
    18061 tgtcatatag tcatcaattt catgagcagg aacaggaata tagacggcat ctttaatatt
    18121 gctactcggt ccaataaaat tttgaatctt tctaaactca ccggaagaga cagtagtgcc
    18181 tcttgtgtta cgtcccatca atatcttatg taattcatga atcaaacgtg tcgtaattgg
    18241 attcccattt ttgatttgca tgacaccata atctaaagca tctttataat tgagcacttc
    18301 cgtcacttcc gtacttttct gttcattcgg tgtttcttca ataatatcta gaaatgtgac
    18361 ctgtgttcct tcgattcttg tagactgaac tgattctgat aacgtcaata attgaatcat
    18421 ttgtgtactt accaatgaat gattaatttg tgtatttaat gcacctatta aactattaat
    18481 ttcagcaact gatttgtata aatctaaagc gttttccaaa gtcacttggg gtggtaagaa
    18541 atctatgcct tgtaaagtca ttaaaaaaca cctctcttaa cgcaaattat acaacatttt
    18601 gcgttaagag aggatagcaa tttgtccttc ttgatacctc attaacagtt aaaccttgtc
    18661 atatcaacgt ttttaagtat tttactcctt tttttgaata cttaccttat acacgagccc
    18721 ttgtgttaac ttatctaaga atttggagta aattacgatt cttcataaac gataatgtcg
    18781 ccgggttggc aatctaaata tttacagatg gactctaaag tactgaagcg cacggccttt
    18841 gcttttccag tctttaaaat agataagtcc gcaatggtcg cccttgtctt tcgctaacag
    18901 tcctactacc aagcctgtaa cggactttca ccatcaagat gttatccatt ccaggtgcac
    18961 cataaacaac ccaggaaatg tattcgacat tcatttcccg ggttatccca ttgacttgaa
    19021 attaattatt ggtgttttca acctatacgc gtatagaaat tagccattgc acttctaaag
    19081 ccactttgct aatttaattg ctacaaattg tagtggtaat cgaatgacat gttgaatgac
    19141 actgctagat tcatctttat atgacattct ctttcttgct gcatagatat tcgctgggaa
    19201 gactaaccac aaaaagcctt ggacaatttt tctcactgcc cttctatttt ttcctagtaa
    19261 tacatacaca gcaatcatta attctaatat tcctgaatat ttaacaatag cccgcttaaa
    19321 tggtaaataa gaaggtacga tttttaaaaa catcgcttcc tttttaaaat gtgagacacc
    19381 acttagataa aatatcatac taaacagtgc acttacgact agtcttttca tataatcgcc
    19441 tctattcttc tgctactttg acaatttgtt ttccaaagtt ctcgcctgta aataattttc
    19501 tgaatgcagt agggacttga tcaaatcctt catctatcgt aaattcagct ttgattttcc
    19561 cttctgtaat ccattggctg agctgttctt gcgcttcttt aaagtaatct gagaattgtg
    19621 caacaacaaa tccttgcatc aatgcttggt ttttgactaa cgttccttga atacgtggtc
    19681 ctagttcttc tacatccgca ttatacgagg aaatagcgcc acatacggga actctcgcaa
    19741 attgattcaa atgtttgaat acttcgtctg acactgcgcc acctacattt tcaaagtata
    19801 catccacacc gtctgggact gctgcttcaa gctgagttgc gaaatcacta cttttatagt
    19861 cgattgccgc atcgaaaccg agctcgtttg ttaaatatgc tgttttcttt tcaccgccag
    19921 cgatacctac tactctggct cccttgattt tagcgatttg ccccacaaca gaacctactg
    19981 cacctgatgc tgccgaaaca accaccgtct cattcgcttg aggtttcccg atttgaagta
    20041 gtcctgtgta ggcagtcatt cctggcatgc ccagtacgct taaatataaa tagagtggca
    20101 catctcttac atctagtcgt gtcactgact ctccagagac tgtattaatt cttctccacg
    20161 gtaaaatacc tgtaacataa tctcccactg aaaattgttc atggtttgat tgttgtactt
    20221 tccctacgat atgtcctttt aatggctcat ctagtgcata aggttgaatg tagcttttcg
    20281 tgtcgttcat tcgacctctc atataaggat ccactgaaat ataaatagat tcgatttgaa
    20341 tttcccccgc ttcaggtgct ttcacatcaa tggtttcaaa acgaaataca tcatcttgtg
    20401 ggactccttt ggggcgggtt gcaagtacaa tttgttcatt attcatagac tattcctcca
    20461 aatatttttg aatcgcttca gttaatggga gttcaccgtt aatgatctgg aattcgcgac
    20521 cttgcaatga tttatcactt aatacagata caagcacttc tgccacgtct tctctcgtaa
    20581 ccgtaggatg ttgcacccct ttaaattgct cactaatttg aaacttttgc gtctctggct
    20641 catttgttag tgcgccaggg tgaacaatag tatactttaa attcgtttgt cttaaataga
    20701 catctgcata atgttttgca attgtataag gttttaaatc tcctgatgca tcaaatgctt
    20761 ctctacgtga gtcgtaagta gaaaccatga tgaagtgctg attgccaacc tgttcactcg
    20821 ctttaatggc cttaatagca ccatctaaat caacaatcat tgtcatatcc gcgcctgtac
    20881 ttcctccaga tccaacagag aagagaattt gatcaaactg tttaaattgg gttgctaatt
    20941 catcgataga ttgtttctct acatcaatgt atactgcgtc gataccttta gatttcaatg
    21001 tttccacttg cgacatattt ctcacacccg ctgtaaagtc catttgccgc acttttaact
    21061 tacgtactaa gtgttgtcct acgccaccat tcgctccaat aattaatgat ttcataaatg
    21121 ttctctcctt taacattgat tattttgtta ataatttcaa cacattttct gcaactgcat
    21181 gcccagattg cggattttgt cctgttacaa tacgaccgtc tatcactgca tatgactgcc
    21241 aatcagcttc ttttttgaat tgtgcaccaa catgcaccaa ctcatcttct aataaatatg
    21301 gcatgtatgg cgttgtgcca ttcgcttgtt cttcactgtt tgtaaaccct gttaccgcct
    21361 ttcctttaac aatattttct ccattttctt taatatctat tagaccgaca gcaccatggc
    21421 ataccgaagc aagaacacca ttgttgttgt aaatactcaa agcaatttca ttcaattgtg
    21481 gattgtctct taaatcccag accaccccat gaccacctgc aaagtaaata gcactatatt
    21541 catcagggtt cacttcttca ggagaaagcg aatgaccaaa ctgattcata taatttgaat
    21601 cggtataata tgcccaatct tcagctgtca tcatttcaga attgagactt gcaggatcta
    21661 atggcacata gccgccttta ggactaacca aatctacttc ataaccagcg tcataaaaat
    21721 ctttcgcaaa atgtgttacc tccgaaaacc acgcacctgt agctctctct gtatcaggat
    21781 atttcgaaat atttgtaact acaattaatg tctttttcat tgaaatgcct ccttattcgt
    21841 gtttatataa agtagaataa cagttaaacc ttagtttaat tgaaaggata tgcttacatg
    21901 gatcaatatt atatagaata cgtttcaact cattgcgata taccgaaaag taaactgcgc
    21961 tattatgaaa agaaaaatat attaa
//
LOCUS       DANHPA010000033        21566 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.033, whole genome shotgun sequence.
ACCESSION   DANHPA010000033 DANHPA010000000
VERSION     DANHPA010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 21566)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21566)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21566
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.033"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(91..480)
                     /locus_tag="PTC28_001030"
     CDS             complement(91..480)
                     /locus_tag="PTC28_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YisL family protein"
                     /protein_id="HDK5716326.1"
                     /translation="MFLINVHIVSWIVLLILFYASYENYSNKQGPTLLFKSLHMATRL
                     FMLLVLITGFWLAIKAFSAPGVSHMLMTLKMVGGIAVISLIEVTLTRKKKKAPSRGLF
                     IATFIVAIVTIILGAILPWGPITGLFH"
     gene            complement(816..1721)
                     /locus_tag="PTC28_001031"
     CDS             complement(816..1721)
                     /locus_tag="PTC28_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HDK5716327.1"
                     /translation="MKFLSFKYKGETSYGVKVKREEAAWDLKQVFANFGEGDFHPKTL
                     LEGLQQNQTLDFQEQVRKAVVAAENSGNGDAYKVKFEDIEFLPPVTPTNNVIAFGRNY
                     QAHAEELKHEVDRLYVFTKAASSLTGDESTIPNHQDITDALDYEGELGVVIGKSGEKI
                     PKGLALDYVYGYTIINDITDRNAQKAHDQAFLSKSLTGGCPMGPYIVTKDELPTPENV
                     NIVTKVNNEIRQDGNTSQMILKIDELIEEISKYVALHPGDIIATGTPAGVGAGMNPPK
                     FLQPGDEVKVTIDNIGTLTNFIAKD"
     gene            complement(1804..5448)
                     /gene="addA"
                     /locus_tag="PTC28_001032"
     CDS             complement(1804..5448)
                     /gene="addA"
                     /locus_tag="PTC28_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-exonuclease AddAB subunit AddA"
                     /protein_id="HDK5716328.1"
                     /translation="MIPTKPEHVQWTDAQWESIYAKGQDVLVAAAAGSGKTAVLVERI
                     IQRILRDGIDVDRLLVVTFTNLSAREMKHRVEARIQQAAIEDPSNQHLKNQRTKIHQA
                     QISTLHSFCLRLIQQHYDVLDIDPNFRTASEVENVLLLEEVIDDVFEKHYDRLDPTFV
                     TLTEHISTDRDDAALRLMVKNLYDFSIANPDPIGWLHALDQPYLERHLQQHYLDILNK
                     YVQLYLQAAQNAIEEAYHQFELVGDFPKHIDFIEGHRQFLRRLLSEQFIDKTALVTYQ
                     LGRIPPKPKAVKEDPMLDAAYENFKAHYEQFKNNLNAVKSTFVGRDDETLLEELQHLA
                     PRVKYLATLTEDVIHAFSRAKRARNILDFSDYEHFALQILRDEQGEPSEIAALYRERF
                     EEILVDEYQDTNRVQESIIGSIKRGDESNGNLFMVGDVKQSIYKFRQADPSLFIEKYQ
                     RFNQPDQSSGWRIDLSQNFRSRKEVLSTTNYLFDHMMDAEVGEIDYDAAAKLYYGAPY
                     DEVDIPVQFNVLMVDKDREMTASEQEAYFIAQQVQTILETQKVYDPKTGAYRPAQYKD
                     IVILERSYSNVRLIQQAFKDQDIPLFVNSKQGYFEQTEIRLMLSFLRTIDNPLQDIYL
                     VGLMRSVIYQFTEDELAKIRIVSPQDNYFYQSIQHYMDDEAADPAIVAKLKPFLNDLA
                     RYQDYSQRHPVYQLIDKLFNDHYIIQYFSALVGGRGRRANLHGLFNKAVDFENSSFRG
                     LFQFIRFIDQMIERGKDFGEENVIGPNDNVVRMMTIHSSKGLEFPFVIYSGLTRDFNK
                     NDLGKPVVLNQHAGLGLQYYDEARGLFYPSLISMSIDLINQKELISEEMRLMYVALTR
                     AKEQLYLIGTSKKADALEMMAAATITDEKLAAIDRFNAKNPFQLIYSILSKHQNTNIQ
                     RHQRFEVDVETLDAAVKPRLQLQHIDAGDVLPTEQDLATYQGHAIEALEARLAATPLD
                     DELAQRVMQQLLYVYPYQQAVQQVSKQSVSELKRQLDTEQADTNYERVRQYRLGVATY
                     ERPQFLQEQQHTAAEVGTLMHTVMQHLPFKEAGLTDQALNDYIESLVERSIIRAHDVN
                     VIVIEEIKRFIQSDLYDRIARSDEVYTELPFVVNQHQVEHTPDTTDASIIQGMIDLVF
                     KENGHYYFLDYKTDALIRRKGMSDEALERQLKEKYRVQMQYYQRALETILKCPVNGYL
                     YFFKYGELEI"
     gene            complement(5445..8909)
                     /gene="addB"
                     /locus_tag="PTC28_001033"
     CDS             complement(5445..8909)
                     /gene="addB"
                     /locus_tag="PTC28_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-exonuclease AddAB subunit AddB"
                     /protein_id="HDK5716329.1"
                     /translation="MFRTFLGRAGTGKSTQVLAEIKDKMKAQPIGHPIIIITPMQGTY
                     LYEQVFVKDTELLGSVRTEVLHFERLGHRIFQEVGGVHEKRLSSVAIEMMIYDILQEA
                     QTELKLYRSQVGYMGFSTKVREQIQDFEKYAVTPEMVSDMATDAHLEPRTRHKLHDIG
                     LIYEKLQARMSSEYITAEAMMDRLVTLIPQSKWLKQAEIYIDGFHNFSTQEYQLIEAL
                     VKHVKSVTLALTTNGDQDALSMFRKPSESLRHFEEMAHRVGQPLERLYFYTQHRFKAP
                     SLTVLEQQFDALQPESHHTADEGIRILEAPTTREEVNEVARTILRDVREKQYRYQDIA
                     ILYRDPSYVYLLDAILPQYDIPYNIDVKKSMTHHPIMEMLRALIEVLQTEWQFEPLMR
                     LLKTNVLTQMMPDSAYLVHLLENFAIERGIYGKRWLDPQYFELNQFRKMGIRPNDPLT
                     EEETATFERVIDLKTKVFNQLLNFEEKLAQGSNAKAFATYFYEAMEGFELPNQLMTQR
                     DMLDEQGQHEAAEEIDQIWNGLIRVLDDVVTVFGDRDMTLTRFLEVLDVGLNELEFSM
                     IPQTLDQVTIGTMDLAKVDNKKHVYMIGMNDGVMPQAINGSGLISDNEKKAFETFAGV
                     QLSPTSDILQMDEAFVCYFAMTRATETVTFSYSLMDASGAEREKSPFLNDVRQMFRNL
                     DIIQLTHQHARDTLSLIEHPHQTKVHLFEAFKTWLDEGLISDTWFTTYAVMAQYPQLN
                     DGLTHLKSALTYNNDTVQLDGELTTQLYGKAIHASVSRFEGYQNCPFKHYTSHGLRLN
                     ERTKYQLQNFDLGTIFHDVLKYIAEKVEGRFNQLTELQIAQLTNDALETLLPHVQFNL
                     LNSTSYYRYLSQRIGAIVQATLYAMKYQTSHSQFKPIAFEKSFRKSPKDASELKAETL
                     YTSQGMPIYIRGQIDRIDTYQKENKSFVNIIDYKSSSSSASLDLVKVYYGLQMQMMTY
                     MDIALQNKERLGLVEEVKPGGFLYMYVHQFRDEKRAWNDIEAAKLDEAFLKSYQLQGL
                     LNNDVDVLEAYDERLTAGFKSDIVPLGMKKDGSLNATSKVADEATIYKLIQHNKQNFV
                     DIASRIMDGHNEVAPMQYRNHLPCQYCQYQAVCHVDSMIDSPKYRRVDEKINPLEILA
                     AEEEEDEV"
     gene            complement(9128..9706)
                     /gene="lepB"
                     /locus_tag="PTC28_001034"
     CDS             complement(9128..9706)
                     /gene="lepB"
                     /locus_tag="PTC28_001034"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDK5716330.1"
                     /translation="MKKETMEWLLSIGLALLIVGLLYAFVIKPYNIKGDSMDPTLKDG
                     ERVIVNKIGKTLGHLDNGNVIVFHADETNDYVKRIIGKPGDHVVYKNDQLYLNGKKVD
                     EPYLDYNLKHKTYEQITGSFDSKDLPGSNGQKQIPKDKYLVLGDNREVSKDSRAFGLI
                     DKDQIVGKVAFRFWPLSEFKINFNPDHTDTQE"
     gene            complement(9725..10243)
                     /gene="lepB"
                     /locus_tag="PTC28_001035"
     CDS             complement(9725..10243)
                     /gene="lepB"
                     /locus_tag="PTC28_001035"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016424627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDK5716331.1"
                     /translation="MKFLIKMTFALISALVVLAVLVLFVVIPYEVKHQNMDTTLQPHD
                     RLLVNKIAPRYNGIHHQDIVVYYAEGQYRVGRVIGEPGQSVEFQKGQLYLDHTPVTES
                     YVNQQDQQSWSLKSLPNSESDIIPPNSYLILNDRRDDDVDSRNFGLIRKSTIEGKLWI
                     RYYPFDRITTHF"
     gene            complement(10487..11818)
                     /locus_tag="PTC28_001036"
     CDS             complement(10487..11818)
                     /locus_tag="PTC28_001036"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HDK5716332.1"
                     /translation="MTHIQLDYQKALKFFGQHELDQQQDAVKAIHRTIHEGTGAGSDF
                     LGWVDLPVNYDKEEFSRIKEAAKQVQSHSDVLVVIGIGGSYLGARSAIEMLTPAFKKD
                     SEYPEIIFAGNHLSSSYLQSLIDYLADKDYSVNVISKSGTTTEPAVAFRIFKKLLEEK
                     YGKEEAVKRIFATTDQAKGALKQLATNEGYETFVVPDDVGGRFSVLTAVGLLPIAVAG
                     IDIDAMMGGAAKAREELSSDDLSSNIAYQYASIRNILYNKGYTTEMLINYEPSLQYFN
                     EWWKQLFGESEGKDLKGIYPSSANFTTDLHSLGQYVQEGRRFLIETVLKVENPEHDIT
                     IEEDADDLDGLNYLAGKTVDEVNTKAFEGTLLAHTDGGVPNMVVKLPRLDAETYGYVV
                     YFFELAVAMSGYQLGVNPFNQPGVEAYKQNMFALLGKPGFEDKKKDLEARL"
     gene            12011..13213
                     /locus_tag="PTC28_001037"
     CDS             12011..13213
                     /locus_tag="PTC28_001037"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HDK5716333.1"
                     /translation="MKDKVVLAYSGGLDTSVAVKWLIEQGYDVIACCLDVGEGKDLDL
                     VYQKALNMGAIESHVINATKEFAEDYVGYTIKGNLMYEQTYPLVSALSRPLISKKLVE
                     IAHETNAVAIAHGCTGKGNDQVRFEVAIKALDPNLKVIAPVREWGWSREEEIDYAKKH
                     NIPVPIGKASPYSIDQNLWGRSNECGVLEDPYVAPPQDAYDLTSELEDTPDTADEILI
                     TFDQGIPTHINGEYYALDDLILYLNERAGKHGIGRIDHIENRLVGIKSREVYETPGAE
                     VIIKAHQALETITLTKDVAHFKPIIEKQFAEQVYNGLWFSPLTDALKTFVDHTQKYVT
                     GQVRVKLFKGHAIVNGRKSPYTLYNEKLATYTKEDAFNQQSAVGFIDIYGLPTQVNAM
                     LHGGYANE"
     gene            13206..14597
                     /gene="argH"
                     /locus_tag="PTC28_001038"
     CDS             13206..14597
                     /gene="argH"
                     /locus_tag="PTC28_001038"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HDK5716334.1"
                     /translation="MSKKAWGGRFEERPEAWVDAFNASIHFDQKLIDEDIQGSIAHAT
                     MLAHQDILTEAESELIIQTLKDIRHDFHEGQIEFQTALEDIHLNVEHELIKRIGPVGG
                     KLHTGRSRNDQVATDMHLYTKKEVHTIIDYIHAFQQTLLQLAEQHVETIMPGYTHLQR
                     AQPISFAHHIMTYFWMLERDQTRFKESLARIDVSPLGAAALSGTTYPIDRHETQKSLG
                     FNALYENSIDAVSDRDYIVETLNNINLTMIHLSRFAEEIIFWSSEEAKFITLSDGFST
                     GSSIMPQKKNPDMAELIRGKVGRTTGHLVSLLMTLKGLPLAYNKDMQEDKEGLFDAIE
                     TIKGSLRIFDGMVATMTVNTDRLQATVRQDFSNATELADYLVTKGIPFREAHEIVGKL
                     VLWAIQHEMYLLDVPLEVYQDHHTQIEVDIYQYLQPDEAVKRRQTYGATGQDAVRHQI
                     DVAKSHFAQYHSK"
     gene            14835..15770
                     /locus_tag="PTC28_001039"
     CDS             14835..15770
                     /locus_tag="PTC28_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HDK5716335.1"
                     /translation="MKAASHLFASTVLIGTLLAGSSALVDSANANSPQNHAHHQATPL
                     SPSQHNVLNKPYVNIGHRGASGYAPEHTFASYDKSLYEMHADYLELDLQMTKDGHLVA
                     MHDDKVNRTTNGTGRVDHYTLAELKQLDAGSWFNQKYPKYQNPQYVGQQVPTLDEIFS
                     RYGTSVNYYIETKSPDVYPGMEEQLLRQLHQYGLDCKKNLRNGKVVIQSFSRDSLKKV
                     HHENPRIPLVQLLERGELPRQSNADLKKIQSYAVGVGPDYHDLTAQNTRTLRQQGFYI
                     HPYTVNDQKTMARLNQYGVTGVFTNYPDLYHALIQ"
     gene            complement(16083..17327)
                     /locus_tag="PTC28_001040"
     CDS             complement(16083..17327)
                     /locus_tag="PTC28_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002503494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HDK5716336.1"
                     /translation="MAEKNNLVTSTQDIIKEAMHKLGFDDGMYELIKEPLRFLTVRIP
                     VKMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVDLPY
                     GGGKGGIVCDPRQMSIHEVERLSRGYVRAISQIVGPTKDIPAPDVFTNSQIMAWMMDE
                     YSQMDEFNSPGFITGKPIVLGGSQGRDRSTALGVVIAIEEAAKRRGKSIEGSRIVIQG
                     FGNAGSFLAKFLYDKGAKIVGISDAYGALHDPEGLDIDYLLDRRDSFGTVTNLFEDTI
                     SNKELFELDCDILVPAAIANQITADNAADIKAEIVVEAANGPTTPEATKILTERGILL
                     VPDVLASAGGVTVSYFEWVQNNTGYYWTEDEVNEKLREKLVNAFDTIYTLSENRKIDM
                     RLAAYIVGIKRTAEAARYRGWA"
     gene            complement(17435..18634)
                     /locus_tag="PTC28_001041"
     CDS             complement(17435..18634)
                     /locus_tag="PTC28_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine--oxo-acid transaminase"
                     /protein_id="HDK5716337.1"
                     /translation="MVTKSEEIIEKTNHYGAHNYLPLPIVIAEAEGVWVKDPEGNRYM
                     DMLAAYSAVNQGHRHPKIIQAVKEQADRVTLVSRAFHSDNLGEWYEKICKLSGKEKAL
                     PMNTGAEAVETALKAARRWAYEVKGIKSNEAEIIAMVGNFHGRTMAPVSLSSEKEYQR
                     GYGPLLEGFQNVEFGNIDSLKAAINENTAAVLIEPIQGEAGINIPPEGYLKAVRELCD
                     EHNVLFIADEIQAGLGRTGKLFATDWDGVKPDVYILGKALGGGVLPISVVLADKEVLD
                     VFTPGSHGSTFGGNPLACAASLAALDVIVDEDLPGRSLELGEYFKNALLEIDHPAIKE
                     VRGRGLFIGVELHEDARPYCERLKDEGLLCKETHDTVIRFAPPLVITKEELDFAIEKV
                     KKVFAQG"
     gene            complement(18810..20354)
                     /gene="pruA"
                     /locus_tag="PTC28_001042"
     CDS             complement(18810..20354)
                     /gene="pruA"
                     /locus_tag="PTC28_001042"
                     /EC_number="1.2.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glutamate gamma-semialdehyde dehydrogenase"
                     /protein_id="HDK5716338.1"
                     /translation="MIPYQHEPFTDFTKEENREAYFRALEKVEGELGKDYPLIIGGER
                     VFTEDKTRVYNPSNREETIGYVSKATKEHAQQALDAAKEAFKSWRKVDPKVRANILFR
                     AAEITRKRKHEFSALLSKEGGKPWKEADADTAEAIDFMEYYGRQMLELKDGKHVNSRP
                     GEYNQFDYLPVGVSVVISPWNFAYAIMAGTTSAPLVTGNTVLLKPSSNTPIISYKFME
                     VLEEAGLPKGVVNWIPGSSSEIGDFLIENKDVGLISFTGSKKVGKEIIQKASVIQEGQ
                     NHIKRVIAEMGGKDAIIVDNEADLQVATDAIVYSAFGFSGQKCSACSRVIAHQDIYDE
                     LLERVKEATEKIKVGNAAEPDTYVGPVIDQKSLDKIKNYIEIGKGEGRLVTGGNTDEA
                     VGNFVYPTIFADLDPNSRVMQEEIFGPVVGFTKVKDFDEAIDVANDTEYGLTGAVISN
                     NRMKLEQARRDFMVGNLYFNRGCTGAVVGYQPFGGFKMSGTDSKAGGPDYLVLHMQGR
                     SVSEHL"
     gene            20767..21153
                     /locus_tag="PTC28_001043"
     CDS             20767..21153
                     /locus_tag="PTC28_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001831918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HDK5716339.1"
                     /translation="MKRQYRVGQHVKVRVTGIQPYGAFVETPDSTEGLIHISEIMDDY
                     VHNLKKLLSPGQTVKAKIISIDHNGKLNLSLKDNDYFKNYERKKGKYSVLDEIQETEK
                     YGFRTLEERLPYWVKQSKKKMKYESK"
BASE COUNT         6319 a         4527 c         3830 g         6890 t
ORIGIN      
        1 gaggggtcat ggtgacatat ccctcgcttt tcacgtcttg tatgactaac tatacgctca
       61 tgaatgactc ccaatttaaa cttgcgttcc ctaatgaaat aagcctgtaa tcgggcccca
      121 cggtaaaata gcgcctaaaa taatggtcac aatagccaca ataaaagtag caatgaatag
      181 acctcgactt ggcgcttttt tcttcttacg cgttaaagtc acttcaatta aactaataac
      241 agctatacct ccaaccattt tcaaagtcat caacatatga ctcacacccg gagctgaaaa
      301 tgctttgatt gctagccaaa agcctgtaat taaaacgaga agcataaata atcgtgtcgc
      361 catgtggagt gacttaaata atagcgtcgg gccttgctta tttgaataat tttcatacga
      421 cgcataaaat aaaatcaaaa gaacaatcca actgacaata tgcacgttga ttaaaaacat
      481 gttcggtcac ctccttatgt tgcgtatctt ttcaatcata acataatata gccttctaca
      541 cattttaatt acctaattat tgttattcca aacacttata aaaataatca aagcaaacag
      601 caacattttt ataacatgca ctgaagagga tgagacacaa aaattttcga tgcttttgat
      661 gtcatatttg tgttaaactt gccccctatg ttttgtggtt cttaattgcc atcatagctt
      721 cgctgtccaa ggggtgtgtt cggcaattta aaaacactat cttcgccatc aataaaaaag
      781 caccaagcgc aaaatcactt gatgcttatt tcatattaat ctttcgcaat aaagtttgtt
      841 aacgttccaa tattatcaat cgtgactttc acttcatcac caggttgtag aaacttcggc
      901 ggattcatac ccgcaccgac gcctgctgga gtacctgtcg caataatgtc tcctgggtgt
      961 aacgccacat attttgaaat ttcttcaatt aactcatcaa ttttcaaaat catttgtgac
     1021 gtattcccat cttgacgaat ttcattgttt acttttgtca cgatatttac gttttcaggt
     1081 gtaggaagtt catcttttgt cacgatgtat ggccccattg ggcaaccccc tgttaaactt
     1141 ttagacaaga atgcttggtc atgtgctttt tgtgcattac ggtctgtgat gtcattaatg
     1201 atggtataac catatacata atccaacgct aaaccttttg gaattttttc gcctgattta
     1261 ccgattacga cacccagctc gccttcataa tctaaagcgt ctgtaatgtc ttggtggttc
     1321 ggaatcgtac tttcatcacc tgttaatgac gaagctgctt tcgtaaatac atataaacga
     1381 tccacttcat gctttaactc ttcagcatgt gcttgatagt tacggccaaa tgcaatgacg
     1441 ttattcgtag gtgttactgg tggtaaaaat tcgatatcct caaatttcac tttatacgca
     1501 tcgccgttac cactgttttc tgcagcaaca actgctttac gtacttgctc ttgaaagtct
     1561 aaagtttggt tttgttgtaa tccttcgagc aatgttttgg gatggaaatc accttctcca
     1621 aagtttgcaa agacttgttt taaatcccaa gccgcttctt ctctttttac cttcactcca
     1681 tatgaagttt cacctttata tttgaatgat aggaatttca ttcataatca gctcctaacg
     1741 tatatcttag tcatattata acgaatattt tggacaaatc acaaattttt aaagtaaagc
     1801 cgcttaaatc tcgagttcgc catatttaaa gaagtataaa tagccgttta ctgggcattt
     1861 taaaatggtt tctaatgcac gttgataata ttgcatttga acacgatatt tctccttcaa
     1921 ttgtctttcc aacgcttcat cggacatccc tttacgacga atgagtgcat cggttttata
     1981 gtccaagaag taataatggc cattttcttt aaagaccaag tcaatcatcc cttgaataat
     2041 agaggcatct gtcgtatctg gtgtatgttc gacttgatgt tgattcacga caaatggcaa
     2101 ttctgtatac acttcgtcac ttctcgcaat acggtcatac aaatcacttt gaatgaaacg
     2161 tttaatttct tcaatcacaa tcacattgac atcatgtgcg cgaatgattg aacgttcgac
     2221 caatgattca atgtagtcat ttaatgcttg atctgttaat ccggcttctt taaatggcag
     2281 atgttgcata accgtatgca tcaatgttcc tacttctgct gcagtatgtt gttgttcttg
     2341 taaaaactgc ggccgctcat acgtggccac gcctaaacga tattgtcgga cacgctcata
     2401 gttcgtatcg gcttgttctg tatcgagttg acgtttaagc tctgaaacag attgctttga
     2461 aacttgttgt acagcttgtt gatacggata aacatacaac aattgttgca tcacacgttg
     2521 cgcaagttca tcatctaacg gggtcgctgc aagtctcgcc tctaacgctt cgatcgcgtg
     2581 accttgatat gtcgccaaat cttgttctgt tggtaacacg tcacctgcat caatatgttg
     2641 taactgaagt cgcggcttga cagctgcatc caaagtctca acatccactt caaaacgttg
     2701 atggcgctga atattcgtat tctgatgttt actcaaaata ctgtatatca gctgaaacgg
     2761 gtttttcgcg ttaaatcggt caatggctgc taatttttca tcagtgattg tagcggctgc
     2821 catcatctcg agtgcatctg cttttttgga cgtcccaatt aagtagagtt gttctttcgc
     2881 acgtgttaag gcaacataca tcaagcgcat ttcttcagag attaactctt tttgattgat
     2941 cagatcgata ctcatagaaa taagcgatgg ataaaacaat cctcgtgctt catcgtaata
     3001 ttgtaaaccg agacctgcat gttgattcaa tacaacaggt tttcctaaat catttttatt
     3061 aaagtcgcgc gttaatcctg aataaatgac aaatggaaat tcaagacctt tactactatg
     3121 aatcgtcatc atacgtacga cattatcatt tggaccaata acattttctt caccaaaatc
     3181 tttgcctcgt tcaatcattt ggtcgataaa acgaatgaat tgaaataaac cgcgaaaact
     3241 agaattttca aaatcgacag ctttattaaa caacccatgt aaattcgcac gacggccacg
     3301 cccacctaca agtgcactaa aatattgaat gatgtaatga tcattaaaca gtttatcgat
     3361 gagttggtat actggatgac gttggctgta gtcttggtag cgtgctaaat catttaaaaa
     3421 cggctttaac tttgccacaa ttgcaggatc cgccgcttca tcatccatgt aatgttgaat
     3481 ggattgataa aaatagttat cttgcggtga tacaatacga atcttagcca gttcatcttc
     3541 tgtaaattga taaatgactg aacgcattaa accgactaaa taaatatctt gtagcggatt
     3601 atcaatcgta cgtaaaaacg acaacattaa gcggatttct gtttgttcaa aataaccttg
     3661 cttactattc acaaatagcg gaatatcctg atctttaaac gcttgttgaa taagtcttac
     3721 attgctgtaa cttctttcaa ggatgacgat atctttatat tgtgctggac gatacgcacc
     3781 tgttttcgga tcatatactt tttgggtttc taaaatcgtc tgtacttgtt gcgcaataaa
     3841 atacgcctct tgctcactcg cggtcatctc tcggtcttta tcgaccatga ggacattaaa
     3901 ctgcacaggg atatcgacct catcatacgg cgcaccataa taaagttttg cagctgcatc
     3961 gtagtcaatt tcgcccactt cagcatccat catatgatca aacaaatagt tcgtcgttga
     4021 gagcacttct ttacgagaac ggaaattttg cgataaatca atgcgccaac cacttgactg
     4081 gtctggttgg ttaaaacgtt gatatttttc gataaacaga ctcggatccg cttgtctaaa
     4141 tttataaata gactgtttca cgtcgcccac cataaataaa ttaccgttcg attcgtcccc
     4201 tcgtttaatg ctgccaataa tactttcttg tacacggttc gtatcttgat attcgtcgac
     4261 taatatttct tcaaaacgtt cacgatataa cgccgcaatt tcggacggct cgccttgttc
     4321 atctcttaaa atttgtagcg caaaatgttc ataatctgaa aagtccaaaa tgttgcgtgc
     4381 tcgtttcgca cgactgaatg catgaatgac atcttcagtt aaagtggcca aatatttcac
     4441 acgcggcgct aagtgttgca attcctcaag cagtgtctca tcatcacgtc caacgaatgt
     4501 agattttact gcattaagat tgtttttaaa ttgctcataa tgcgctttaa agttttcata
     4561 agccgcatca agcatcggat cttcttttac agctttcggt ttaggtggga tgcggccaag
     4621 ttgataagtc accaatgctg ttttgtcgat aaactgttca cttaatagtc ggcgcaaaaa
     4681 ttggcggtga ccctcaataa aatcaatgtg cttaggaaaa tcccctacta attcgaattg
     4741 atgatacgct tcttctattg cattttgtgc tgcttgtaaa tacaactgga catacttgtt
     4801 taaaatatct aaataatgct gctgcaaatg acgctccaaa taaggttgat ctaacgcatg
     4861 taaccaacca attggatccg ggtttgcgat actgaaatca tataaatttt taaccattaa
     4921 acgtaatgcg gcatcatctc tatccgtcga aatgtgctca gtcaacgtca caaatgttgg
     4981 atccaaacgg tcgtaatgct tttcaaacac gtcatcaatc acttcttcaa gcaataggac
     5041 attttcaact tcactcgcag ttctaaaatt aggatcaatg tccaacacgt cgtaatgctg
     5101 ctgaatgaga cgtaaacaaa agctatgcaa cgttgaaatt tgtgcttgat gaatttttgt
     5161 acgttgattt tttaaatgtt gattggaagg atcttcaata gcggcttgtt ggatacgcgc
     5221 ttcgacacga tgtttcattt cgcgtgcact caagtttgta aacgtcacaa cgagtaaacg
     5281 gtcaacatca atgccatcac gtaaaatgcg ctgaataata cgttcaacga ggactgctgt
     5341 tttaccagaa cccgccgctg ctgctacaag tacatcttga ccttttgcgt atatactttc
     5401 ccactgtgca tcggtccact gtacatgttc cggttttgtt ggaatcatac ttcatcctcc
     5461 tcttcttctg ccgcaagtat ttcaagggga ttgatttttt catccactcg acgatatttc
     5521 ggactatcaa tcatactatc tacgtgacaa acggcttgat attgacaata ttggcatggt
     5581 aaatgattgc ggtattgcat tggcgcgact tcgttatgcc catccataat acgacttgcg
     5641 atatccacaa agttttgctt attatgttgg atcagtttat aaatggttgc ttcatccgcc
     5701 actttactcg tcgcattcaa actgccatct tttttcatac cgagtggcac gatgtcggat
     5761 ttgaagcccg ctgtcaatcg ttcatcatac gcttctaata catctacatc attgttaagc
     5821 aatccttgta attgatacga cttcaagaag gcttcatcta acttggccgc ttcgatatca
     5881 ttccacgcac gcttttcgtc tctaaactgg tgcacgtaca tgtataaaaa gccacctggt
     5941 tttacttctt ccactaaacc taaacgttct ttgttttgaa gcgcgatatc catataggtc
     6001 atcatttgca tttgcaagcc gtaatacact ttcactaaat cgagtgatgc gcttgaagag
     6061 gatgatttgt aatcaataat attgacgaaa cttttattct ccttttgata cgtatcgatt
     6121 cggtcaattt ggccacgaat ataaatcggc atgccttgtg atgtatacaa cgtttctgct
     6181 tttagttctg atgcatcttt cggtgattta cggaacgact tttcaaatgc gataggctta
     6241 aattgtgaat gcgacgtttg gtatttcatt gcatataaag tggcttgaac tattgcaccg
     6301 atgcgctgtg ataaataacg ataatacgac gtcgagttta acaaattaaa ttgtacatgt
     6361 ggtaacaatg tttctaatgc gtcgttcgtc aattgcgcaa tttgaagctc tgtgagttga
     6421 ttaaaacgtc cttcaacctt ttcggcgata tattttaaaa catcatgaaa aattgtccct
     6481 aagtcaaagt tttgaagttg atatttcgtc cgttcattga gcctcaaacc gtgtgacgta
     6541 taatgtttaa atggacaatt ttggtaccct tcaaaacggg acacactcgc atgaatcgcc
     6601 ttaccataaa gctgtgtcgt caactctcca tccaattgta cggtatcgtt attgtatgtg
     6661 agcgctgatt tcaaatgtgt cagcccgtca ttgagttgtg ggtactgtgc catcactgca
     6721 taagtcgtaa accaagtatc cgaaatcaat ccttcatcta accatgtttt aaatgcttca
     6781 aatagatgca ctttcgtttg gtgtgggtgt tctataagtg ataacgtgtc acgtgcgtgt
     6841 tggtgtgtca attggatgat atctaagttg cggaacattt gacggacatc atttaaaaac
     6901 ggactttttt ctcgttctgc accgctcgca tccatcaaac tgtatgagaa cgtcactgtt
     6961 tctgtcgcac gtgtcatcgc aaaataacag acgaatgctt catccatttg taaaatatct
     7021 gaggtcgggc tcaactgcac accggcaaag gtttcaaacg ctttcttttc attatctgaa
     7081 atcaaaccag agccgttaat tgcttggggc atcacgccgt cgttcatccc gatcatataa
     7141 acgtgctttt tattatccac tttcgctaaa tccattgtcc caattgtcac ttgatctaac
     7201 gtttgtggaa tcattgaaaa ttcgagttcg ttcaaaccga catctaacac ttctaaaaag
     7261 cgcgttaacg tcatatcacg gtcaccaaac acggtcacga catcatccaa cacgcgaatc
     7321 aacccgttcc atatttggtc aatttcttcc gctgcttcat gttgaccttg ctcatctaac
     7381 atatcccgct gcgtcattaa ctgattgggc agttcaaaac cttccatcgc ttcataaaaa
     7441 tacgtcgcaa aagctttggc attcgaacct tgtgctaatt tttcttcaaa attcaacaat
     7501 tgattaaaca ctttcgtttt taaatcgatc acacgttcaa atgtagcagt ctcttcttcc
     7561 gtcagtggat cattcggtcg gatacccatt ttacggaatt gattcagttc aaaatattgt
     7621 ggatcgagcc agcgtttgcc ataaatccct cgttctatcg caaaattttc taataaatgg
     7681 actaaatacg cactgtcagg catcatttgg gttaagacat tcgttttcaa caagcgcatc
     7741 aacggttcaa actgccattc tgtttgtaac acttcgatta gtgcacgcaa catttccata
     7801 atcggatgat gcgtcatcga ctttttgaca tcaatattgt acggaatatc atattgtggc
     7861 aaaatcgcat ctaacaaata gacatacgac ggatcacgat acaatattgc aatatcttga
     7921 taacggtact gtttttcacg cacatctctt aaaatcgtac gtgccacttc attaacttct
     7981 tcacgtgtcg tcggtgcttc taatatgcga ataccttcgt ctgctgtgtg atgactttca
     8041 ggttgtaatg cgtcaaactg ctgttctaac acggttaatg atggtgcttt gaatcggtgc
     8101 tgcgtataaa aatataagcg ctcaagtggt tgaccgacac ggtgagccat ctcttcaaaa
     8161 tgacgcaacg actcagatgg cttacggaac atgcttaatg catcttgatc gccgtttgtc
     8221 gttaatgcta acgtcacaga tttcacatgc ttcactaaag cttcgatcag ttgatattct
     8281 tgagtagaaa agttatgaaa cccatctatg tatatttctg cttgtttgag ccacttcgac
     8341 tgtggaataa gcgtgacaag tcgatccatc atcgcttccg ctgtaatata ttccgaagac
     8401 atacgtgctt gcagtttttc ataaatcaac ccaatgtcat gtagcttatg tcgggtgcgc
     8461 ggttcaaggt gcgcatcggt agccatgtcc gaaaccatct caggcgtcac agcatacttt
     8521 tcaaagtctt gaatttgttc acgcactttt gtactaaatc ccatataacc tacttgtgag
     8581 cgatacaact tcaactctgt ttgtgcttct tgtaaaatat cgtaaatcat catttcgatg
     8641 gcaaccgacg acaaacgttt ttcatgcacc ccgcctactt cttgaaaaat acgatgacct
     8701 agtcgttcaa agtgcaacac ttcagtacgt acactcccta acaattcggt gtctttgacg
     8761 aatacttgtt catacaaata cgtcccttgc atcggtgtga tgataatgat gggatgccct
     8821 atcggttgtg ctttcatttt gtctttaatt tctgctaaca cctgtgtgct cttacccgtt
     8881 ccagcacgac ctaaaaatgt tcgaaacatc gaatcccccc tatctttctt caatacgaat
     8941 cggcattcat tatttaaagt ttattatagc attaacccca cttgatactc tatgaaagtc
     9001 ggtcgcttgt tggatctttt tgacatagaa aaagccggga aaacgtcatc gtctcccagc
     9061 ctctggttag ttttttgatt atcgaatcac tccatgatgt ctgttcatca tgcgcgatca
     9121 ttgatgatta ctcttgtgta tctgtatgat ctggattgaa gttgatttta aattcactca
     9181 atggccagaa tctaaatgca actttcccta cgatttgatc tttatcgata agaccaaaag
     9241 cacggctatc tttactcact tcgcggttgt cacctaacac gagatattta tctttcggaa
     9301 tttgtttctg accgttgcta cctggcaagt ctttagaatc aaatgaaccc gtaatttgtt
     9361 catatgtttt atgtttaagg ttataatcta aatatggttc atctactttt ttaccattta
     9421 agtacagttg gtcattttta taaacgacat gatcacccgg tttaccgata atacgtttta
     9481 catagtcatt cgtttcatct gcatgaaaga cgatgacatt accattatct aaatgaccta
     9541 aagttttccc tattttgtta acgataactc tttctccatc ttttaatgta gggtccatag
     9601 aatcaccttt aatgttatag ggtttaatga caaatgcata caatagacct acaatcaata
     9661 aggctaatcc tatagacagc aaccattcca ttgtctcttt tttcacagtt ttacacctct
     9721 tattttaaaa atgagtcgtt attctatcaa aaggataata acgtatccat aacttacctt
     9781 caatagttga tttcctaatg agaccaaaat ttcgagaatc gacgtcatca tcacgacgat
     9841 cgtttaatat taaatacgag tttggcggta tgatatcact ttctgaattc ggcagtgatt
     9901 tcagtgacca tgactgctga tcttgttgat tcacatacga ttcagtcaca ggggtatggt
     9961 ccaaatacaa ttggcctttt tgaaattcaa ctgattgacc tggttctcca atcacgcgtc
    10021 caacacgata ttgaccttcc gcatagtaga caacgatatc ttgatgatga atcccattgt
    10081 agcgtggtgc gattttattc actaacagcc gatcatgggg ttgcagtgtt gtatccatat
    10141 tttgatgttt tacttcatat gggattacaa caaacaaaac gaggacggct aaaacgacca
    10201 atgcgctgat tagagcgaat gtcatcttta tcagaaactt caattttgca ctcccaatcc
    10261 tatcaatttc atcataacaa attttatctt atcataattt ctcttaaaac gttaactttt
    10321 acatttgaat cataaatctc tgcacgcatt gaaacaaaat aattttgatg tctcaatccc
    10381 tgaacaaaaa gcaatagggc actgagtcaa cgtacgcaat aaaaaagact gacaagacgt
    10441 atgctcatca gccctttttt atattctatt caacagccct attggattat aagcgtgctt
    10501 ctaaatcttt tttcttatct tcaaatccag gtttacctaa taatgcaaac atgttttgtt
    10561 tataagcttc tacacctggt tggttgaatg ggttcacacc taattggtaa ccactcattg
    10621 cgactgctaa ttcaaagaag tagacaacat aaccataagt ttcggcgtct aaacgaggta
    10681 atttaacaac catgttaggc acaccaccgt cagtatgtgc aagtaaagtt ccttcgaatg
    10741 ctttagtgtt gacttcatct actgttttac ctgctaagta gtttaagcca tctaagtcat
    10801 ccgcatcttc ttcaattgta atatcgtgtt caggattttc tacttttaat actgtttcaa
    10861 ttaagaaacg acggccttct tgtacatatt gacctaatga gtgtaagtca gttgtaaagt
    10921 tagcgcttga agggtaaatc ccttttaagt ctttaccttc tgattcaccg aataattgtt
    10981 tccaccattc attgaagtat tgtaatgatg gttcgtagtt gattaacatt tctgtagtgt
    11041 aacctttgtt gtaaaggata ttacggattg atgcgtattg gtatgcaata tttgaagata
    11101 aatcgtccga agataattct tcacgtgctt ttgctgcacc gcccatcatt gcatcgatat
    11161 caataccagc tacagcgatt ggtaataaac ctactgccgt taatactgag aaacggccac
    11221 cgacatcatc aggtacgacg aacgtttcgt agccttcatt tgtcgcaagt tgtttcaagg
    11281 cacctttcgc ttggtcagtt gttgcaaaaa tacgtttaac tgcttcttct ttaccatatt
    11341 tctcttctaa taattttttg aaaatacgga acgcaactgc aggttcagtc gttgtaccag
    11401 attttgaaat cacgttaact gaataatctt tatcggctaa atagtcgatg agtgattgta
    11461 aatatgatga tgataaatga ttacctgcaa aaataatttc aggatattcg ctatcttttt
    11521 tgaatgctgg tgttaacatt tcgattgctg aacgtgcacc aaggtacgaa ccaccaatac
    11581 cgattacgac aagtacatct gaatgtgatt gtacttgttt agctgcttct ttaatacgtg
    11641 aaaattcttc tttatcataa ttaactggta ggtcaaccca tcctaagaag tcgcttcctg
    11701 cacctgtacc ttcgtgaatt gtacggtgaa ttgctttaac agcatcttgt tgctgatcta
    11761 attcgtgttg accaaaaaat tttaaagctt tttgataatc taattggata tgtgtcatac
    11821 acttttgcct cctaatttaa cttaacgtac cttcatttta ctaagttgtt tcaacaaatt
    11881 caattgactt acccaagcat atccattggc gtgcatttta tatgaatatt tatttgggta
    11941 tttgcatata aattcattta tgttatagta cagttaatca aatattaatt ctttaacaga
    12001 ggtgactagg atgaaagata aagtggtttt agcatattca ggcggtttag atacaagtgt
    12061 ggccgttaaa tggttgattg aacaaggata cgacgtcatt gcatgttgtt tggatgtagg
    12121 tgaaggaaaa gatttagacc ttgtttatca aaaggcgctt aatatgggtg caattgagtc
    12181 tcacgtgatt aatgcaacaa aagaatttgc ggaagattat gtcggttata caatcaaagg
    12241 taatctgatg tatgaacaaa cgtatccgct cgtttctgca ttgtctcgcc cacttatttc
    12301 taaaaagtta gtggaaattg cacacgaaac aaatgccgtt gctattgcgc atggctgtac
    12361 aggaaaaggc aatgaccaag tgcgttttga agtggcgatt aaagcattag atccaaacct
    12421 caaagtgatt gcacctgtgc gtgaatgggg ttggagccgt gaagaagaaa tcgattatgc
    12481 aaaaaaacac aatatccctg tccctattgg caaagcatct ccgtattcca tcgaccaaaa
    12541 cttatggggc cgtagtaatg aatgtggtgt attagaagat ccatatgttg ctccaccaca
    12601 agatgcttat gatttaacaa gtgaattaga agatacaccc gatacagctg atgaaatttt
    12661 aatcacattc gatcaaggga ttccaacaca tattaacggt gagtattatg cattagatga
    12721 tctcatcttg tatttaaatg aacgcgctgg aaaacatggc atcggtagaa tcgaccatat
    12781 tgaaaatcgc ctcgtcggta ttaaatcaag agaagtgtat gaaacacccg gtgctgaagt
    12841 gattattaaa gcacaccagg cattagaaac gatcacttta acgaaagatg tggcgcattt
    12901 taaacccatt attgaaaagc aatttgcaga acaagtgtat aacggcttat ggttctcacc
    12961 tttaactgat gcccttaaaa catttgtaga ccatacgcaa aaatatgtaa ctggtcaagt
    13021 acgtgtcaaa ctattcaaag gtcatgccat cgtcaatggt agaaaatcac cgtacacgct
    13081 ttacaatgaa aaattagcga cttatacgaa agaggatgcg ttcaaccaac aatctgcagt
    13141 gggctttatc gatatttatg gcttaccaac acaagtcaac gcgatgttac atggaggcta
    13201 tgcgaatgag taaaaaagct tggggcggta gatttgaaga gagaccagaa gcatgggtcg
    13261 atgcttttaa tgcgtcgatt cactttgacc aaaagctcat tgacgaagat attcaaggta
    13321 gtattgcaca cgcaacgatg ctcgcacatc aagatatttt aactgaagca gaaagtgaat
    13381 tgattatcca aactttaaaa gacattcgac acgactttca cgaaggccaa attgaatttc
    13441 aaacagcatt agaagatatt catttgaatg ttgaacatga attgattaaa cgtatcggtc
    13501 ctgtaggcgg taaactgcat accggacgta gccgtaatga ccaagttgca acggatatgc
    13561 atttatatac gaaaaaagaa gtgcatacga ttattgatta cattcatgct tttcaacaaa
    13621 cgttattgca gcttgcagaa caacatgtag aaacaattat gcctggctat acgcaccttc
    13681 aacgtgcaca accgatttca tttgcgcatc atatcatgac gtatttttgg atgctcgaac
    13741 gtgaccagac gcgtttcaaa gagtcattgg cacgtatcga tgtctcccct ttaggtgccg
    13801 cagcattgag tgggacaacg tatccaatag accgtcatga aacacaaaaa tcactcggtt
    13861 ttaatgcatt atacgaaaac agtatcgatg ccgtgagtga tcgtgactac attgttgaaa
    13921 cgttgaataa tattaactta acgatgattc acctgtctcg ttttgctgaa gaaatcattt
    13981 tctggtcatc ggaagaagcg aaattcatca cattatctga cggtttttca acagggtcat
    14041 ctattatgcc acaaaagaaa aaccctgata tggctgaact tatccgcggt aaagtgggcc
    14101 gtacgactgg acatctcgtg agtctattga tgacattaaa aggcttaccc cttgcttata
    14161 ataaggatat gcaagaggat aaagaaggtc tgtttgatgc aatcgaaacc atcaaagggt
    14221 cactgcgcat ctttgacggt atggtcgcca caatgactgt gaacacggat cgtctacaag
    14281 caacagtgcg tcaagacttt tcaaatgcga cagagttagc agactatctc gtaacaaaag
    14341 gtatcccgtt tagagaggct cacgaaatcg tcggcaagct cgtactgtgg gctattcaac
    14401 atgagatgta tttactcgac gtcccgttag aggtgtatca agatcatcac acccaaatcg
    14461 aagtagatat ttatcaatat ttacaacctg atgaagccgt caagcgtcgt caaacttacg
    14521 gtgctacagg tcaagatgca gtgcgtcacc aaatcgacgt cgcaaagagt catttcgcgc
    14581 aatatcattc aaagtaatac catccaaaaa agagactcgg acaactgaac gtccgggcct
    14641 ctttttgtgt ctactatggt atgtgatatc gtttaatgca ctcatttaac accattcaca
    14701 tcctaccatt ttaattgaat atgtcgcaat catttcaaac ataaagataa agtaatttct
    14761 taattaagag tgttgccatt tttttgaatt ttgtatatgc tgaaattaat ctatcatact
    14821 aaggaggcgt caaaatgaaa gctgcatcac accttttcgc atcaactgtt ttaattggaa
    14881 cactgcttgc tggttcaagc gcacttgttg atagcgcaaa tgccaattca cctcaaaatc
    14941 atgcccatca tcaagcgaca cccctctctc caagccaaca taatgtcttg aacaaacctt
    15001 atgtgaatat cggacatcgt ggcgcaagtg gttatgcacc ggaacatact tttgcgtctt
    15061 acgataaaag cctttatgaa atgcatgccg attatttaga acttgattta caaatgacta
    15121 aagacggtca tttagtcgcc atgcatgatg ataaagtaaa ccgtactaca aatggaaccg
    15181 gccgtgtcga tcactataca cttgctgaat taaaacagtt agatgccggt tcatggttca
    15241 accaaaaata tccaaagtac caaaacccgc aatatgtcgg tcaacaagtt ccaacacttg
    15301 atgaaatctt cagccgttat ggcacaagtg tcaattatta catcgaaacg aaatcacccg
    15361 atgtttatcc aggcatggag gaacaactgc tccgccaatt acatcaatat gggctcgact
    15421 gtaaaaagaa tttgcgtaac ggtaaagtag ttattcaatc attttcaaga gacagcctca
    15481 aaaaggttca tcacgaaaac ccgcgtattc cacttgtaca attgttagaa agaggcgaac
    15541 ttccacgaca gtctaatgct gacttgaaaa aaattcaaag ttacgcggtg ggtgtaggcc
    15601 cagattatca tgatctaact gctcaaaata cccgcacatt acgtcaacaa ggcttttaca
    15661 tccatccata taccgttaac gatcaaaaaa caatggcgcg tttaaatcaa tatggggtca
    15721 ctggcgtttt cacgaactat cccgacctat atcacgcgtt aattcaataa taaaggatgt
    15781 ttcattgcta aacatacaga ataggcgacg agacataaaa acttttgatg caattgatgc
    15841 ctttaatgac gtaaatcacg gcgatcaaga tgaacaatgc tgcaatcaat cattcgtgct
    15901 ccatcgcaaa agcaatgccc actactgaaa aaatagttgc aataataagt gtgaacgtac
    15961 ttctatccat tgttgtgcac tcctcgatat tttacctaaa tgctagtttt caatgtattt
    16021 caatgtaatt aaaaaagcag aaacgcacac atagcgtctc tgcttattca tctctttttc
    16081 tcttatgccc atccgcggta acgtgccgct tctgctgtac gtttaatgcc gacaatgtag
    16141 gctgctaaac gcatgtcaat tttgcgattt tcagataaag tataaatcgt gtcgaacgca
    16201 ttcactaatt tttcgcgtaa cttttcattg acttcatctt ctgtccaata ataacctgta
    16261 ttattttgta cccattcaaa gtatgaaact gttacaccac cagcacttgc aagcacgtct
    16321 ggcactaata aaataccacg ttcagttaaa atttttgttg cttcaggcgt tgttggtccg
    16381 ttagctgctt ctacaacaat ttcagcttta atgtctgctg cgttgtctgc agtaatttgg
    16441 ttcgcaatgg ctgctgggac taaaatatca caatctaatt caaatagctc tttgtttgaa
    16501 atcgtatctt caaataagtt tgtcaccgta ccaaaactgt cacggcgatc taataagtag
    16561 tcgatatcca atccttctgg gtcatgaagt gcaccgtaag catctgaaat acctacaatt
    16621 ttcgcacctt tatcgtacaa aaatttcgct aagaagctac ctgcattacc gaaaccttga
    16681 atgacaatac gtgaaccttc aatggattta ccacgacgtt ttgcagcttc ttcaatggcg
    16741 ataacgacac ctaatgctgt tgagcggtca cgtccttgtg aacctcctaa tacgataggt
    16801 ttacctgtaa taaagcctgg agagttaaat tcgtccattt ggctatattc atccatcatc
    16861 catgccataa tttgagagtt tgtaaatacg tctggcgctg gaatgtcttt tgtcggtcca
    16921 acaatttgtg aaatcgcacg cacataacca cgagataaac gctcaacctc atgaatactc
    16981 atttgacgtg ggtcacaaac gatcccccct ttaccaccac cgtatggtaa gtcgacaata
    17041 ccgcatttta atgtcatcca cattgacaat gcttttactt cttcctcatc aacatctggg
    17101 tggaaacgta ccccaccttt agttggtccc actgcatcgt tatgttgtgc acggtaacct
    17161 gtaaatgttt ttactgtacc atcgtccatt tttactggaa tacgtactgt caaaaatctt
    17221 aaaggttctt tgataagttc atacatgcca tcatcaaagc ctaatttatg cattgcttcc
    17281 ttaatgatgt cttgcgttga cgtcactaaa ttattttttt cagccatgat ccatttcgcc
    17341 tctttttcct actattgttt tcgcttacat tcgtattgta acataagcat ttttatttta
    17401 aagtgctttc cgctcaaatt aaacatttaa ctttttaccc ctgtgcgaac acctttttca
    17461 ctttttcaat cgcaaaatct aactcttctt ttgtgatgac taatgggggt gcaaatcgaa
    17521 tgactgtatc gtgtgtttct ttacataaaa gtccttcatc tttaagtcgt tcacaataag
    17581 gacgtgcatc ttcatgcaat tccacaccga taaagagacc acgaccacgt acttctttaa
    17641 tcgccgggtg atcaatttca agtaatgcat ttttgaaata ttcaccgagt tcaagtgagc
    17701 gccctggtaa gtcttcatca acaatcacgt cgagtgcagc tagtgaagcg gcacatgcta
    17761 acggattccc tccgaaagtc gaaccatgtg aacctggtgt aaagacatcc agtacttctt
    17821 tatccgcaag tacaactgag ataggtaata caccgcctcc gagtgcttta cctaaaatat
    17881 aaacatctgg tttcacacca tcccagtctg tcgcgaataa cttaccagta cgacctaaac
    17941 cagcttgaat ttcgtctgca atgaataata cgttatgttc gtcacacagt tcacgtactg
    18001 cttttaaata gccttctggt ggaatgttaa tccctgcttc accttgaatc ggctcaatca
    18061 gcacagcagc agtattttca ttaatggcgg cttttaaact atcaatgtta ccaaactcaa
    18121 cattttgaaa accttctagc agtggaccat aaccacgttg atattctttt tctgatgaaa
    18181 gtgatactgg tgccattgtt cgtccgtgga agttaccgac catcgcaata atttcagctt
    18241 cgtttgattt tatacctttt acttcatacg cccaacgacg cgcagctttt aatgctgttt
    18301 ctaccgcttc tgcacctgta ttcatcggta aggctttctc tttacctgat aatttgcaga
    18361 ttttttcata ccattcgcct aaattgtcac tatggaaagc acgtgaaaca agtgtcacgc
    18421 gatccgcttg ttctttaaca gcttgaatga ttttagggtg acgatgccct tgattgactg
    18481 ctgaatatgc agccaacatg tccatgtaac gattgccttc tgggtctttc acccataccc
    18541 cttcagcttc ggcaatcacg attggaagcg gtaagtagtt gtgcgctcca taatgattcg
    18601 ttttttcaat gatttcttca gattttgtta ccatgcaatc tcctccttaa atacaatacg
    18661 tacatctctt cacatgaaag tgtagggcaa atcgattatt cgcatcactc aacacctgtc
    18721 attcaagtag tgaacgatac ttacaaatga tttaccctac atcagtacaa tacattatgt
    18781 cctgtacatt tgtgttattt aattcatcat tatagatgtt ctgatactga acgaccttgc
    18841 atgtgtaata ctaagtagtc tggtccgcct gcttttgagt ctgtacctga cattttgaag
    18901 ccaccaaatg gttggtaacc gacaactgca cctgtacagc cacggttaaa gtaaaggttg
    18961 ccgaccataa agtcacgacg cgcttgttct aacttcatac ggttgtttga aatcacggca
    19021 cctgttaaac cgtattctgt atcatttgcg acatcaattg cttcatcaaa gtctttaact
    19081 ttagtgaaac cgacaactgg tccgaaaatt tcttcttgca tcacgcgtga atttggatct
    19141 aaatcagcaa agatagttgg atagacaaag ttaccgactg cttcatctgt attaccacct
    19201 gttacaagac ggccttcacc tttaccaatt tcgatgtagt ttttaatttt gtctaaagat
    19261 ttttggtcaa tgactggtcc gacatacgta tctggctctg cagcattacc tactttaatt
    19321 ttttcagttg cttctttaac gcgctctaac aattcatcat aaatgtcttg atgcgcgata
    19381 acacgtgaac atgctgaaca tttttggcca gagaaaccga acgctgagta gacaatagca
    19441 tctgtcgcaa cttgtaaatc cgcttcgttg tcgacgataa tcgcatcctt accacccatt
    19501 tcagcaatga cacgtttaat atgattttga ccttcttgaa tgacagatgc tttttggata
    19561 atttctttac cgactttttt agaacctgta aatgaaatga ggcccacatc tttgttttca
    19621 attaagaagt caccaatttc acttgaagaa ccaggaatcc agttcacaac cccttttggt
    19681 aaaccagctt cttctaaaac ttccataaat ttataagaaa taattggtgt attagaagat
    19741 ggttttaata atactgtgtt tcctgttaca agtggtgctg acgttgtacc cgccataatc
    19801 gcataggcaa agttccatgg agaaataaca acactgacac ctacaggtaa gtagtcaaac
    19861 tgattgtatt caccaggacg actgtttaca tgtttaccgt ctttaagttc aagcatttga
    19921 cgaccataat attccataaa gtcaatcgct tctgctgtat ctgcatctgc ctctttccaa
    19981 ggtttaccac cttcttttga aagtaatgca gagaattcat gcttacgttt acgtgtaatt
    20041 tcagcagctc tgaataaaat atttgcgcgt acttttggat ctacttttct ccaagattta
    20101 aacgcttctt tcgctgcatc taacgcttgt tgtgcatgtt ctttcgttgc ttttgaaaca
    20161 tacccgattg tttcttcgcg atttgaagga ttgtaaacac gtgttttatc ttcagtgaat
    20221 acgcgctctc caccaataat gagtggataa tctttcccga gttcaccttc aactttttct
    20281 aatgcacgaa aataagcctc gcgattttcc tctttcgtaa aatctgtaaa tggttcgtgt
    20341 tgatatggaa tcatttaaaa atcctccttt gtttataata agaaaaccct tacatctatc
    20401 atgacatatt tatgacatat ttgtaaaaga aaacactatt tgtatcaacc taaaaaccgt
    20461 tcgtgtcaca tgccatgagg tactcacatg ctcgaatcat tttgagtcaa tcgatattga
    20521 ttaagcgctt tcatttataa gccattatag cctttttaac cttgtttttg caatagtctt
    20581 tctctagcaa attaatcact tttcacgata cttttataac ataaatccgt aacaatccag
    20641 tgcccttcat atacaattct tcgttagcgt taaaaaatca atttcgaatt acgaatggtt
    20701 aggagtttct tcaaagatgt gctatgataa aaatgttaaa aactaatcga taaggggtta
    20761 tgaatgttga aaagacagta tcgtgttggg caacatgtca aagtacgcgt gactggtatt
    20821 caaccctacg gcgctttcgt cgagacccct gacagtactg aaggactcat tcatatatcc
    20881 gaaatcatgg atgattatgt acataattta aagaagcttt tgtcaccagg tcaaactgta
    20941 aaagctaaaa tcatctcgat tgatcacaac ggaaaattaa atttatctct gaaggataat
    21001 gattatttta aaaattatga gcgtaagaaa ggtaaatatt cagtattgga tgaaattcag
    21061 gaaactgaga aatatgggtt tcgaacatta gaggaacgtt tgccatattg ggtgaaacag
    21121 tccaaaaaga agatgaaata tgagtctaaa taacgcttga ggtcaatgta cagtttgtgc
    21181 attggctttt ttatttggct ttttttggga gttgtgcggt ttgagttctt tggggttaca
    21241 tatacagcgc ggtgacagta gcaagatagc tagagctgag tccttattat taatagtaaa
    21301 aattgacatg gatggatatt ttcctcgatt cattaataga ccactcagtc ggttgttact
    21361 ttttagttgt ccatctcgtt ttatctcaac acgagagcaa ttctctgcta tctcaaaaaa
    21421 atagttgaaa acattgtgat gacgaatgag tagcacattt tgtattaatt tcatcactct
    21481 attatgtgat ttatcccccc attttaccga aagatcaact ataaaaaaag gtactcaaaa
    21541 ttcatgtttt gtgaacttta agtccc
//
LOCUS       DANHPA010000034        21397 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.034, whole genome shotgun sequence.
ACCESSION   DANHPA010000034 DANHPA010000000
VERSION     DANHPA010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 21397)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21397)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21397
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.034"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..259)
                     /locus_tag="PTC28_001044"
     CDS             complement(<1..259)
                     /locus_tag="PTC28_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DivIVA domain-containing protein"
                     /protein_id="HDK5716340.1"
                     /translation="MSDVSLKLSAKDIYEKDFEKTMVRGYRPQEVDAFLDDIIADYQK
                     MSDLNNEVIKLSEENHKLKKEIEDLRIRVASSRPQDNKSFAN"
     gene            complement(279..836)
                     /locus_tag="PTC28_001045"
     CDS             complement(279..836)
                     /locus_tag="PTC28_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1273 domain-containing protein"
                     /protein_id="HDK5716341.1"
                     /translation="MFKTMYLTGYKSYELQIFNKHAPEVTYLKKFITQKLIQYIEEGL
                     EWVLIQGQLGIELWGAECVIALKEDYPELKLGVITPFLEHTSKWNEQNQLKYQQIIEK
                     SDYVNSVHQHTYQGPFQFEQADQFMLDHTDITVLIYDEEQSASPQFFKKKLVDFVEKT
                     NYTCDIVTFDEMTNFINDLQWSEEI"
     gene            complement(829..1170)
                     /locus_tag="PTC28_001046"
     CDS             complement(829..1170)
                     /locus_tag="PTC28_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1798 family protein"
                     /protein_id="HDK5716342.1"
                     /translation="MQIVIQQLIHDLATISQRFKAARAGRQYNFYKEVQPFVQQVDAH
                     LQSLQHYQDTISKQKYFNAQKLQRMSSLMSEIAVACHQSTMSKKLFLDQFKAVQHDLN
                     YLSQMERDGHV"
     gene            1366..1992
                     /gene="recU"
                     /locus_tag="PTC28_001047"
     CDS             1366..1992
                     /gene="recU"
                     /locus_tag="PTC28_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RecU"
                     /protein_id="HDK5716343.1"
                     /translation="MNYPNGKPFKQSQTQDGSTRTNKSSKIKYGGRGMTLENDIESSN
                     RYYLKTERAVIHKKPTPVQIVHVDYPKRSQAVIKEAYFRTPSTTDYNGVYKGYYIDFE
                     AKETKNKTSFPLQNIHAHQVEHMKQAVAHGGIVFLLLRFKGINEVYLLPFKRFFPFWE
                     RYLKNGKKSIKVEEIQENGYYIPYQYQPRLDYLNAVDKLILDESEDRL"
     gene            1989..4217
                     /locus_tag="PTC28_001048"
     CDS             1989..4217
                     /locus_tag="PTC28_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HDK5716344.1"
                     /translation="MTEKKGTSKQTKKKSGQKKNKNIKRTIIKVLSFLVLAFVILALL
                     SVLLFAYYAWKAPAFNESKLQDPSPAKIYDKDDELVKTLDNGARREHVDLKDVPDTMK
                     NAVLATEDNRFYDHGALDYKRLFGAVLKNITGGFGSQGASTLTQQVVKRTFLTDQKSI
                     ERKAQEAYLSYRLEQEYSKDEIFQMYLNKIYYSDGVYGVKAAARYYFDKDLKDLNLAE
                     SAYLAGLPQVPNTYNIYDHPEEAEKRKDTVLYLMAYHHRISEKEKKEAQDTPITENLV
                     QRSAEDRQIKPDDDSEQYNSYVNFVKQELMNNPEFKGQNLSDILNSGIKIYTYMDKDA
                     QNSLQNRIDNGGYYKNEDQMVGSTIVDSQTGALVAISGGRNYKDVVERNQATDAHPTG
                     STLKPFLAYGPAIDNMQWATNHSIQDESAYNIDGATFRNYDQQSHGTVSIYDALRQSF
                     NIPALKTWQQVKSQAGNNAPTDFAKKVGLEYENTDIGPSEVLGGSSSEFSPTQLASAY
                     ASFANGGTYNKAHSIKKVVEANGNTIEFDFTSHKAMNDYTAYMITEILKGTFEAYGSA
                     YGNKVDGVNMAAKTGTGTYGAETYQQYNLPDSAAKDVWISGFTPKYTMSVWMGFSEVK
                     QYGQNSFVGSSEQKYPLLLFRDVMSDISPRDGSDFTRPDSVAGSGKSLYVAKSPDGNT
                     TSNFTESSNGTNSGSSSNNSRNGNNGQNLSNGNGNNNLQQSNNNNSNNNGNGIFGNLF
                     GR"
     gene            complement(4861..5196)
                     /locus_tag="PTC28_001049"
     CDS             complement(4861..5196)
                     /locus_tag="PTC28_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716345.1"
                     /translation="MNHQEIIANMSKLEGALDEYAKQRKIGHDASVTLLDEYYNLLIR
                     YFNVINEVENYRLVTQESLRIVPFNIDERFAYIETRKHHYMGYQQMKTLKSELVKMYA
                     AYRARHRLL"
     gene            complement(5193..5867)
                     /gene="nth"
                     /locus_tag="PTC28_001050"
     CDS             complement(5193..5867)
                     /gene="nth"
                     /locus_tag="PTC28_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HDK5716346.1"
                     /translation="MISKKKALEMIDVIDQMFPDAQCELVHENPFELTIAVLLSAQCT
                     DNTVNRVTKDLFQKYHTPEDYLAVDLEELQQDIRSIGLYRNKAKNIQKLSQSLLDQYD
                     GIVPHTHEQLEGLAGVGRKTANVVMSVAFGEPALAVDTHVERVSKRLGICRWKDSVTE
                     VERRLTSIIPRERWTKSHHQLIFFGRYHCLAKKPKCGVCPLFEDCREGQKRYRASLKK
                     AAGASS"
     gene            complement(5857..6549)
                     /locus_tag="PTC28_001051"
     CDS             complement(5857..6549)
                     /locus_tag="PTC28_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002497888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaD domain-containing protein"
                     /protein_id="HDK5716347.1"
                     /translation="MNQRELQIRPVVIRFELLEHYQELDLNENDLVILIKILYAYESS
                     NEQPSIDVLKKGTTMQSSEVTAIIQKLIQLGLLAMRVEKNNEGKFTEYINLDGFYEQL
                     ASIFKQIETSKETTSEEEAFKMVFKKIETAFGRALSPLEIEHLNQWIDVDHYAIELID
                     AAIDEALAHQKTSLKYIDRILLNWQKNNVSTVKDAQPIRAKFKKQPQQPTQKTEHIPK
                     FNWLKGENPFDK"
     gene            complement(6724..8016)
                     /gene="asnS"
                     /locus_tag="PTC28_001052"
     CDS             complement(6724..8016)
                     /gene="asnS"
                     /locus_tag="PTC28_001052"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HDK5716348.1"
                     /translation="MKTTIKEAKNKIGQEVTIGAWLANKRSSGKIAFLQLRDGTGFMQ
                     GVVVKADVDEDIFQRAKSLTQETSLYVTGEITEDNRSDLGYEMQVKNIEVIHEAHDYP
                     ITPKNHGTEFLMDHRHLWLRSKKQHAVMKIRNEIIRATYEFFNENGFTKIDPPILTAS
                     APEGTSELFHTKYFDEDAFLSQSGQLYMEAAAMAYGKVFSFGPTFRAEKSKTRRHLIE
                     FWMIEPEMAFTTHEESLEVQEAYVSYVVQSVLKNCQIELKLLERDTSKLEKVQAPFPR
                     ISYDDAIKFLHEAGFDDIKWGDDFGAPHETAIANHYDLPVFIVNYPTKIKPFYMQPNP
                     ENEDTVLCADLIAPEGYGEIIGGSERINDLELLEQRIDEHQLDTESYQYYLDLRKYGS
                     VPHSGFGLGLERTVAWIAGVEHVRETSPFPRLLNRLYP"
     gene            complement(8084..10786)
                     /locus_tag="PTC28_001053"
     CDS             complement(8084..10786)
                     /locus_tag="PTC28_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease H-like domain-containing protein"
                     /protein_id="HDK5716349.1"
                     /translation="MAHQPCYAVVDLETTGNQADYDEIIQIGITFVRNNQIIDHYHSM
                     IKTDLTIPTFIQALTSIEEEMLNQAPYFKEVAHKIYSKIKDCIFVAHNVNFDLNFLKR
                     SFKKCHIHYQPKKVIDTLELFKIAFPTEKSYQLTELAESLGIPLTQAHRADEDAYTTA
                     RIMILAFEKFEVLPINTKKQLYYLSKQLKYQLDDYFFEQVRLHDATKEMTGLNQFEQI
                     YYLAPPDFEVSHIQFDGNLTALYQTIVDVCHYQYREEQLYMAQIVFDQLMHNEKALIE
                     ADTGSGKSLAYLVASLMYYIETGEHVMISTNTKMLQNQLLLQDIPKINEALNVSINAT
                     LIKSKQDYISLGLISQVLKDETTNYDVNLLKMQLLIWILETRTGDIQELNLRGGQKMY
                     FEQKIETYVPIRKDFHYYNHIRTNASKIQIGITNHAHLLYSSPEHTLYQMFKHCIIDE
                     AHRLPDYAIDCAIHAFGYADIKYQLGLIGKTENEKLLKQIDQLEQQRILQKLDIPPID
                     VFSIKQDINEIHDMNEHFFDHIFNKVHEGQLYDDETSKLHYAYDMKRDQLIPLLHQYI
                     SKINVTLEHFNNMKHKVVKTLRKHLLYIVDQLREIETGLKAGHLFYITLKNVQQKSTI
                     KIHLKDASIKHLLTEKILKQFESISFVSGTLTFNGSFKNYQKWFEEDVHFQTYKITSE
                     HQHNANAHIFVPNDIKRYNYQNQEEYIQTIVEYIARYVTTVDSKCLVLFTSYKMLYNV
                     MDYLNQMAEFDDYVILSQQQSQNYKIVQQFNHFDKAILLGTSTFFEGFDYQAHGIKCV
                     MIAKLPFMNHHAVKPMLLANEFDNVFKDYVLPEAVLRFRQGLGRLLRNENDQGIVVSF
                     DNRLIHSQYRHFFQNTFTHFQQHQDNIKQFGQLLHQMQSQLDQS"
     gene            complement(10814..11785)
                     /locus_tag="PTC28_001054"
     CDS             complement(10814..11785)
                     /locus_tag="PTC28_001054"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HDK5716350.1"
                     /translation="MSKYLDQILELLTDARPDYISGQTIAEQLNVSRMTVKKTVDQLK
                     AEGFSIDSIHNKGHQLKALPQAWHKGVLTSIFKHQSFINQFQTYPSVDSTQQVAKKAI
                     LNDDRTMLILSDEQTAGKGRFKRVWQSSKGKGLWMSLVLRPDIPFSMLTTFNLFMSLA
                     ISEAIQSYSPAKVEIKWPNDIYIEGQKVCGFLTEMVANADGIEAVICGIGINLNHDVE
                     DFDEALQQTATSVKLQYGKIINRYDFLEQLMQRIEVRYQQFLTEPFTTIKDEYIQRSN
                     IWNKQLRFTEGKQQFYGNVMEIDDQGFLLVVDRDGDFHRLMSADIEF"
     gene            complement(11769..12971)
                     /locus_tag="PTC28_001055"
     CDS             complement(11769..12971)
                     /locus_tag="PTC28_001055"
                     /EC_number="2.7.7.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HDK5716351.1"
                     /translation="MNQSQFELAKPILERLIQNGYEAYFVGGSVRDFIMNRPIHDVDI
                     TTNATPDEIESLFEHTIPIGKEHGTINVVWSHENYEVTTFRAEAEYVDHRRPTEVYFV
                     RDLYQDVERRDFTMNAIAMNINYERIDHFEGERDIEQRIIRTVGDAKTRFDEDALRIL
                     RGLRFKSQLGFTIEEATFEAMAHQMSDLEYLSIERIMNELTLLIKGTFVAKTFPILEA
                     LQLWRYIPYFKDVDVAAIKINAPIDMEAFLAILSYRTNYQAFKSLKLSNAQVRTIQTL
                     ISAIQVAQTIDTKVQLQQFTYDFGLEVALKINELRPILEDNQIDLPSPIIFSSASLQA
                     VWEDLPIQSREDLAIDGKWLMQAFQLKGGPWIKDVLRQVECAVIQRQVNNQTEAIIEW
                     VRTHVKIS"
     gene            complement(12975..14099)
                     /gene="bshA"
                     /locus_tag="PTC28_001056"
     CDS             complement(12975..14099)
                     /gene="bshA"
                     /locus_tag="PTC28_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-alpha-D-glucosaminyl L-malate synthase
                     BshA"
                     /protein_id="HDK5716352.1"
                     /translation="MKIGITCYPSVGGSGIIATELGILMAERGHEVHFITSNMPFRLN
                     KPVPNITFHQVDVNQYAVFQYPPYDISLSTKIANVINEYDLDVLHMHYAIPHAICGIL
                     ARQMSGKDIKIMTTLHGTDITVLGYDHSLRNAIKFGIEQSDIVTSVSESLKDETNEII
                     APQKEIVPIYNFVRESEFPTGYNTDLKESYGITQDEKVLIHVSNFRKVKRIDTIIDTF
                     ALIREHIQSKLLLIGDGPELHDMRIKVREMGLSDDVLFLGKQDCMSNFYQMSDIVLLM
                     SEKESFGLTLLEAMKTGVVPIGTRAGGIQEVIQHRETGFLVDIGDSQTAADYALKLLT
                     DSALYQSLRENMLHDIAKRFDSQIIADQYEHYYKKMIGEL"
     gene            complement(14115..14438)
                     /locus_tag="PTC28_001057"
     CDS             complement(14115..14438)
                     /locus_tag="PTC28_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide pyrophosphohydrolase"
                     /protein_id="HDK5716353.1"
                     /translation="MNRSLSDMQKEVDTYISQFKTGYFSPLANLARLTEEVGELAREI
                     NHYHGEKKKKASEAENTIEAELGDNLFVLLCLANSLNIDMTKSFNQTMKKFNKRDKNR
                     FERKT"
     gene            complement(14617..15318)
                     /locus_tag="PTC28_001058"
     CDS             complement(14617..15318)
                     /locus_tag="PTC28_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000094841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metallopeptidase"
                     /protein_id="HDK5716354.1"
                     /translation="MMSIMSLIIYFIILMILPMYAQHQVKSNYEKYAQVRSTSGKTGR
                     EVALEILHANGIYDVEVKEGQGFLTDHYDPKNKVVVLSPSNYNKPSVAGTAIAAHEVG
                     HAIQHYEGYFFLRFRSALVPVANIGSSMSYIFIMAGIIMTSLHMAIGSTALWIGIFLM
                     AFAVLFSIVTLPVEFDASKRAMNQIQKMHIVNEKEYKHAGRVLRAAAMTYVAATAVAV
                     AELVRLILIARSADQ"
     gene            complement(15354..15947)
                     /locus_tag="PTC28_001059"
     CDS             complement(15354..15947)
                     /locus_tag="PTC28_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1405 domain-containing protein"
                     /protein_id="HDK5716355.1"
                     /translation="MWTALQNMLFYQRPILILIIMSNILGTLYGYIWYTPQLYRSAWY
                     FWPFIPDSPTATLFLVVSLILLLCKKQSAIIDTLAFVTLLKYGVWAVMMNFLLFIEDD
                     TIYVMGVLLIISHGIMAIQAVLFLPQFKFTLTSIAITIFWVFHNDVIDYVFHQYPVYG
                     GLGHYEAQIGYLAFWLSVVPILFVIYRLSRGKKIDQV"
     gene            complement(15976..16533)
                     /locus_tag="PTC28_001060"
     CDS             complement(15976..16533)
                     /locus_tag="PTC28_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpiB family protein"
                     /protein_id="HDK5716356.1"
                     /translation="MLDTRLNFEKRDFIEYLLFHYQFKSRISVWLLNFIKTNHALIEK
                     IHFVDQIVADHPTLEMAVSDAPVIAIQYHEGETLLMNTDEIFHQVIRHSQQLDVKIHF
                     NHEANRDLRLDHLLLQQLLATQNGDAYHKDMYHIEFSNSTEQQIIHLLKSHIDLSLNL
                     KDIQLFKHYTKILNLIKLRHITDKT"
     gene            complement(16545..17786)
                     /locus_tag="PTC28_001061"
     CDS             complement(16545..17786)
                     /locus_tag="PTC28_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716357.1"
                     /translation="MQDIYKLIDDINLQKLDQLDSRVQEALQSDNDNALFVLGETLYQ
                     FGLTPQGLEVFRTLYMKYPDEDEILIYFIDGLISENQTDEALEFLNEVPLTPERLMLE
                     ADLYQQINMIDIAIEKIEQAIELQPADPIVHFALAELLYYDGQYLRASREYDTVLESG
                     EYEINGVNLFSRIADSSLQSGNYTDALRWFDEINDNELTSDDYLKKAIAYEKNDMTHE
                     AIKLVKTLLQKDPDFIQGYYYLQQLYENEKTFGDAIEIGQEGLRLNQFYKELMYSTGA
                     LQIEHGDQNEGVTLLKQALEVDPGYQEPLLMLADFLRNKEDYEALIELVQYVDEEDMD
                     PQFMWQLAYALGQEERDKEAQHFYGLAFASMRDNIDFLKDYYYYLIEIGQIEPAKSIL
                     QLLLQKDSGNPEWDAEQGRLL"
     gene            complement(17788..19077)
                     /gene="aroA"
                     /locus_tag="PTC28_001062"
     CDS             complement(17788..19077)
                     /gene="aroA"
                     /locus_tag="PTC28_001062"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HDK5716358.1"
                     /translation="MKKIMINGPLIGEASVPGDKSMTHRAIMLASLAQGHSVIHHPLL
                     GEDCLRTAKIFEKLGVKMDITDEAITIDSPGYAHFQTPHQTLYTGNSGTTTRLMAGLL
                     GGLGIQSVLSGDASIGKRPMDRVLQPLRQMNVNISGVEDNYTPLIIGSSKVKGIHYEM
                     PVASAQVKSAILFASLFAQNTTTIREIDLSRNHTETMFAHYGIPVQTQDLTVTLPGEG
                     IHHIQPRDFDVPGDISSAVFLIVAALITPGSDITLHNVGINPTRDGIIEIVERMGGKI
                     SLSNQTNGPEPTATIRVQYTDDLKGIEIGGSLIPRCIDELPTIALLCTQAHGSSIIKD
                     AEELKVKETNRIDTTANELGKLGLKLEPTDDGLIIKPSTISQIQPVDSHNDHRIGMML
                     AVASLMTPEPIEIAQFESVNVSFPGFLPLLKQLENEG"
     gene            complement(19078..20151)
                     /locus_tag="PTC28_001063"
     CDS             complement(19078..20151)
                     /locus_tag="PTC28_001063"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HDK5716359.1"
                     /translation="MQLTTTYPDHNYPIIIEHAAFNQLDALVSDYQHVFVFVDQNVYT
                     AWEQKISRFVHHHSYTTFQIPSGEQVKYMAQYERYIEALLAHQPTRNTCLIAIGGGAT
                     GDFVGFLAATLLRGVDFIQVPTTILAHDSSIGGKVGINTTHGKNLVGAFHRPKAVIYD
                     LEFLTSLPYSEILSGYGEVYKHALLNNAQSVQILENAYPDSMHLKTLQAIEQYLINGI
                     QTKLQIVLNDEKERGQRQFLNLGHTFGHAIEYQYQLAHGHAVMIGIVYQFIVSNLLLG
                     THFDVPHYLKYLNHLGYPLDIIRQFEFEPLLKLMRNDKKNDAKGVRMVLLQAIGDPIV
                     KHVEIPILEKALETFKQQYLEVI"
     gene            complement(20168..21334)
                     /gene="aroC"
                     /locus_tag="PTC28_001064"
     CDS             complement(20168..21334)
                     /gene="aroC"
                     /locus_tag="PTC28_001064"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HDK5716360.1"
                     /translation="MRFLTSGESHGPQLTVIIEGLPANMTIDIDQINEEMFKRQGGYG
                     RGRRMQIEKDTVEIVSGVRHGYTLGSPVTIVIKNDDFTHWRNIMGAAPISEEEKENMK
                     RVITKPRPGHADLVGGMKYNHRDLRNVLERSSARETAARVAVGALCKQLLKQLGIDVY
                     SRVIEIGGIKDEGIYNIDTIIENIDKNDVRVIDDSIAQAIRDKIDSAKKEGDSIGGVV
                     QVIVNHMPVGIGSYVHYDRKLDGRIAQSVVGINAFKGVSFGEGFKAAEKLGSEIQDPI
                     LYSEEQGYYRASNHLGGLEGGMSNGMPIIVNGVMKPIPTLYKPLASVDIDSKEPFKAT
                     IERSDSCAVPAASIVCEHAVSYEIARSVLEEFGSQDFSRLAQQVAERRALNQTF"
BASE COUNT         6451 a         4081 c         3814 g         7051 t
ORIGIN      
        1 gatttgcgaa actcttatta tcttgtggtc gactagaggc aacacgaata cgtaaatctt
       61 caatctcttt ttttaatttg tgattttctt ctgataattt gatgacttca ttatttaagt
      121 ctgacatttt ttgataatcc gcaataatat cgtctaaaaa agcatccact tcttggggac
      181 gatagccacg aaccattgtc ttttcaaagt ctttttcgta aatatctttt gctgataatt
      241 ttaacgaaac atctgacatt tgttccacct catttgattt aaatttcttc ggaccattgt
      301 aaatcattga taaagttcgt catttcgtca aacgtcacaa tatcacaagt atagtttgtt
      361 ttttcaacaa aatcaactaa cttctttttg aaaaattgtg ggcttgcgga ttgttcttca
      421 tcatagatta gtacagtgat atccgtatgg tccaacataa attgatccgc ttgttcaaac
      481 tgaaacggtc cttggtatgt atgctgatgc acactgttga cataatcact cttttcgatt
      541 atctgttgat atttgagctg attttgctca ttccatttag atgtgtgttc taaaaatggt
      601 gtaatgacac ctaattttag ctcgggataa tcttctttca acgcaatgac acactcggca
      661 ccccataatt caatacccaa ttgcccttgg attaacaccc attctaaacc ttcctctata
      721 tattgaatta atttttgcgt tataaatttt tttaaatagg tcacttcagg tgcatgttta
      781 ttgaatattt gcagttcgta agacttgtaa cctgtcaaat acattgtttt aaacatgtcc
      841 gtcacgctcc atttgtgata aatagttcag atcgtgttgt acggctttaa attgatctaa
      901 aaataatttt ttgctcattg tggattggtg gcatgcgact gcgatctctg acattaaaga
      961 tgacatacgt tgcaattttt gtgcattgaa atatttttgt tttgaaatgg tgtcttgata
     1021 gtgctgtaat gattgcaagt gagcatcaac ttgttggacg aacggttgaa cttctttata
     1081 aaaattatat tgtcttcctg ctcgagctgc tttaaaacgt tgtgaaatag ttgctaaatc
     1141 gtgaatcaac tgttgtatga caatttgcat aaatctaaac acctttcatt aaactaaatt
     1201 aattttatca taatgtgttg aaatatttta acaggaattg attttaggtc acgttaaacg
     1261 actatgtatg ttacaataat gtcagtttat gaatcctttc gatttataaa acgcctatcc
     1321 tatcatgttt atagggcaaa aaaacatgga ttgtaggtga gacaaatgaa ttatccaaac
     1381 ggtaagccat ttaagcagag tcagactcaa gacggaagta cgaggacaaa caaatcgagt
     1441 aaaattaaat acggtgggcg cggtatgaca ttggaaaatg atattgaaag ctccaaccga
     1501 tattatttga agacagaacg cgctgtgatt cataagaaac caacacctgt gcaaattgtc
     1561 catgtggatt atccaaaacg cagtcaagct gtaattaaag aggcttattt tcgaacgcct
     1621 tcaactactg attataatgg tgtttataag ggctattaca ttgattttga ggcaaaggaa
     1681 acgaaaaaca aaacatcttt tccgttacaa aatatccatg cgcatcaagt tgaacatatg
     1741 aagcaagcag tggcccatgg agggattgtc tttttgctac tccgctttaa aggaatcaat
     1801 gaagtttatc tcttgccgtt taagcgattt tttccgtttt gggagcgcta cttaaaaaat
     1861 ggaaaaaaat caattaaggt tgaagaaatt caagaaaatg gttactatat tccttatcag
     1921 tatcaaccca gattagatta cctcaatgca gttgataagt tgatattaga tgaaagtgag
     1981 gaccgcttat gacggaaaag aaagggactt ctaagcaaac gaaaaagaag tccggtcaaa
     2041 aaaagaataa gaacatcaag cgtacgatca ttaaagtgtt gagcttttta gtattagcat
     2101 ttgtcatctt agcactctta tctgtattgc ttttcgcata ttatgcttgg aaagcacctg
     2161 catttaacga gtctaaactc caggatccaa gtccagcaaa aatttatgat aaagatgatg
     2221 aattagtgaa gacgcttgat aatggtgcaa gacgagagca tgtggattta aaagatgttc
     2281 ccgatacgat gaaaaatgca gtgcttgcaa ctgaagacaa ccgtttttat gatcacggtg
     2341 cactcgatta taaacgtttg ttcggtgccg tattgaaaaa tattacgggc ggctttggtt
     2401 cacaaggtgc ttcgacttta acacaacaag tggttaaacg tacgttttta acagaccaaa
     2461 agtcgattga acgtaaagcg caagaagcct acctatctta tcgtttagaa caggaatatt
     2521 ctaaagatga aattttccaa atgtatctca acaaaattta ctactctgat ggtgtgtatg
     2581 gggttaaggc tgcagcaaga tactactttg ataaagattt aaaagatctg aacttagctg
     2641 aatcagcgta tctcgcaggt ctgccgcaag ttcctaatac ttataacatt tatgaccatc
     2701 cagaagaagc tgaaaaacgt aaagacacag tattgtactt gatggcatat catcaccgca
     2761 tttctgaaaa agagaaaaaa gaagcgcaag atacgccaat tactgaaaat ctcgtgcaac
     2821 gttcagctga agatagacaa attaaaccag acgatgattc agaacaatac aattcttatg
     2881 tgaactttgt gaagcaagag cttatgaaca atcctgaatt taaaggacag aatttatctg
     2941 acattcttaa cagtggtatt aaaatttaca cttacatgga taaagatgct caaaacagct
     3001 tacaaaaccg tattgataat ggtggttatt ataaaaatga agatcagatg gtgggttcaa
     3061 caatcgtaga cagccaaact ggtgctttag ttgccatttc aggtggtcgt aactataaag
     3121 atgtcgttga gcgtaaccaa gcgactgacg cacatccaac tggttcgaca ttgaagccat
     3181 tcttagcgta tggtccagca attgacaata tgcaatgggc aaccaaccac tctattcaag
     3241 acgaatcagc ttacaatatt gatggtgcca catttagaaa ctatgaccaa caaagtcacg
     3301 gtacggtatc catttatgat gcattacgtc aaagttttaa cattccagca ttgaaaacat
     3361 ggcaacaagt caaatcccaa gctggtaaca atgcaccgac tgattttgcg aaaaaagttg
     3421 gtttagagta tgaaaataca gatattggtc cttcagaagt attaggtggt tcatcttctg
     3481 aattctcacc tacgcaactt gcttcagcct atgcatcatt tgcaaatggt ggtacctaca
     3541 acaaagcaca ttcaatcaaa aaagttgtag aagcaaatgg taatacaatt gaatttgatt
     3601 ttacgagcca taaagcaatg aatgactaca cagcatacat gattactgag attttaaaag
     3661 gtacatttga agcatacggt tctgcttatg gtaacaaagt cgatggtgtg aacatggcag
     3721 ctaaaacagg tacaggtacg tatggtgcag aaacatatca acagtataat ttacctgatt
     3781 cagcagctaa agacgtatgg atttcggggt tcacaccgaa atatacaatg tctgtatgga
     3841 tgggctttag tgaagtgaaa caatacggtc aaaactcatt cgttggcagt agtgaacaaa
     3901 aatatccact attactcttt agagatgtaa tgagcgatat tagtccacgt gatggttcag
     3961 actttacacg tcctgactct gttgcaggta gtggaaagag cttatatgtt gcaaaatcac
     4021 ctgatggcaa tacaacaagc aactttacag aatcaagtaa tgggacaaac agtggttcaa
     4081 gttctaacaa cagcagaaat ggtaacaacg gtcagaattt gagcaatggc aatggcaata
     4141 acaatttaca acaaagtaac aacaataata gcaataataa cggtaatggt attttcggta
     4201 acttatttgg tcgttaaaat gccatacaaa aaggagcagg gacagcatga gcgccccgct
     4261 cctttttgta ttcgtctttt cacttatata aaacaaaaag taaaggtgaa gaacataaaa
     4321 gcttttgatg agattgatgc aatattttga ttaaatttgc cctctgccta tgattctatg
     4381 atttgtggtt cttgattgcc tgcatggctt cgcttttcga taggagtcct cctacagcta
     4441 attaacactt gattaaacta ttacatttgt tgcagtgtta atagatttct gtactgcact
     4501 cgtgatcaaa agcgtgcgca ttgaggagtc agacagctac tgcgataaac agtaaccact
     4561 attaaagtaa aaaaggaatt gtaagcaata tgcacacatt cccacaggag tctcagcctt
     4621 ctgagcaatc ttatttcaaa tacaggggac tgatggcaag attataaaac caagaaactc
     4681 aatcacatcc atttttgtat cccgctcctc gttcgttttc aaactgtttt atagtcatta
     4741 atgaatcata tgtttaaaaa tcaaaggaat gggactggga aaactcaatg ccccattcct
     4801 ttgataaatt tcaaaggaat atcatgtatg aaatagatgc atccatggtt gccatcacat
     4861 ttacaataag cgatggcgtg cacgatatgc tgcatacatc ttcactaatt cagatttcag
     4921 tgtcttcatt tgttgatatc ccatataatg atgcttacgt gtttcgatat atgcaaaacg
     4981 ttcatcaata ttgaacggca caatacgtaa actttcctga gtcactagcc gataattttc
     5041 cacttcatta atcacgttaa agtaacgaat taacaaatta taatattcat ccaacaacgt
     5101 aaccgatgca tcatgaccaa ttttacgctg tttcgcgtat tcgtctaatg ctccttctaa
     5161 ttttgacata tttgcaatga tttcttgatg attcatgatg atgcacctgc cgcttttttc
     5221 aatgatgcac gataacgttt ttgtccttca cgacaatcct caaacaatgg acagacacca
     5281 cactttggtt ttttcgctaa acagtgataa cgaccgaaaa agatcaattg atgatgactt
     5341 ttcgtccaac gttctcgtgg tatgatcgat gtgagtcgac gttctacttc tgtcacacta
     5401 tctttccagc gacaaatgcc taaacgtttc gacacacgtt cgacatgtgt atcaacagcg
     5461 agtgcaggtt ccccaaatgc tacactcatg acgacattcg ccgtttttcg ccctacacca
     5521 gctaaccctt ctagttgttc atgggtatgt ggcacgattc catcatattg atcgagtaaa
     5581 gattgcgata gtttttgaat attttttgct ttattacggt agagcccaat tgaacgaata
     5641 tcttgttgta actcttctaa atccacagct aaatagtctt ctggcgtgtg atacttctga
     5701 aataagtcct tagtcacacg gttcaccgta ttgtcggtac attgtgctga gagtaaaaca
     5761 gctatcgtta attcgaatgg gttttcatgt acaagttcgc attgtgcatc tggaaacatt
     5821 tgatcaatga catcaatcat ttcaagtgct ttctttttac ttatcaaaag gattctctcc
     5881 tttcagccaa ttaaatttcg gaatgtgttc tgttttttga gtaggttgtt gaggttgctt
     5941 tttaaatttt gcccgtatcg gttgtgcgtc tttaactgtt gagacattat ttttttgcca
     6001 attgagtaaa atacgatcaa tatatttgag tgacgttttt tggtgtgcca acgcttcatc
     6061 aattgccgca tcaattaatt caatggcata atgatcgacg tcaatccatt ggttaagatg
     6121 ttcaatttct agtggtgata atgcccgccc aaatgcagtt tcgatttttt taaacaccat
     6181 tttaaatgct tcttcttcag acgtcgtttc tttggatgtt tcgatttgtt taaaaataga
     6241 agccaattgt tcgtaaaagc catcaagatt aatatattca gtgaatttac cttcattatt
     6301 tttttcaacg cgcatcgcca ataaaccgag ttgaatcaat ttttgtataa tcgcggtcac
     6361 ttctgatgat tgcatcgttg tccccttttt taacacatca atagaaggct gctcattaga
     6421 agattcataa gcatataaaa tttttattaa aatcactaaa tcattttcgt taaggtccaa
     6481 ttcttgataa tgctcaagta attcaaagcg aatcacaaca ggccgtattt gcaattctcg
     6541 ttggttcatt agttaccctc ctatatcgcc gtcatgtgac aacaatgtat tcttgacgca
     6601 ccgctatagt tagaataaaa agagagtgag tgtgaaatcc ctattgtcaa agaatttcat
     6661 cttctcaccc ccgtaaaaga tgtggcgatg gtatgcccat caacatcatt acattggcat
     6721 ctcttatgga tacaaacgat ttaacaagcg tgggaatggt gatgtttcac gcacatgttc
     6781 cacaccggca atccatgcga cagtacgttc taagcctaaa ccgaaaccac tgtgcggtac
     6841 actaccatat ttacgtaaat ctaagtaata ttgatagctt tctgtatcaa gctgatgttc
     6901 atcgatacgt tgttctaaca actcgaggtc gttaatacgc tcagagccac cgataatttc
     6961 gccatagcct tcaggtgcaa ttaaatccgc acaaagcact gtgtcttcat tttctggatt
     7021 tggttgcatg tagaatggtt taatttttgt tggataattc acaatgaata caggcaagtc
     7081 gtaatggttg gcaatcgctg tttcgtgtgg tgcaccgaag tcatcgcccc atttaatatc
     7141 atcaaaccct gcttcatgta aaaacttaat cgcatcatca taagaaatac gtggaaatgg
     7201 cgcttgaact ttttctaatt ttgatgtgtc gcgttctaat aatttaagtt cgatttgaca
     7261 atttttaagc acggattgta cgacatatga aacatacgcc tcttgtactt ctaaactctc
     7321 ttcatgtgtt gtaaaggcca tttcaggttc aatcatccag aattcaatta aatggcgacg
     7381 tgttttagat ttttcggcgc ggaatgtcgg gccgaatgaa aatacttttc cgtaagccat
     7441 tgccgcagct tccatgtaaa gttgtccact ttgtgataaa aaggcatctt catcaaagta
     7501 ttttgtatgg aacaattcac ttgtgccttc aggtgcactt gctgttaaaa tcggtggatc
     7561 aattttcgtg aagccatttt cattaaagaa ctcatatgtt gcacggatga tttcgttacg
     7621 aattttcatc acagcgtgtt gttttttaga acgtaaccat aaatggcggt gatccattaa
     7681 aaattcagta ccatgatttt taggtgtaat cggatagtcg tgtgcttcgt ggatcacttc
     7741 aatatttttg acttgcatct cataacctaa gtctgagcgg ttgtcttcag taatttcacc
     7801 agtcacatac aatgatgttt cttgtgttaa tgattttgca cgttgaaaga tgtcctcgtc
     7861 aacatctgct ttaacgacca caccttgcat aaaccctgta ccgtcacgca attgtaagaa
     7921 tgcgatttta ccacttgaac gtttattcgc tagccaagca ccaatcgtga cttcttggcc
     7981 aattttattc tttgcttctt taatcgttgt tttcataacc attctcctat ttgttttaat
     8041 actgttatta ttttaacaaa actattgccg aacttctacc acatcatgat tgatcgagtt
     8101 gagattgcat ttgatggagc aattgtccaa actgtttgat gttgtcttga tgttgttgaa
     8161 aatgtgtaaa cgtattttgg aaaaagtgac gatattgact gtggattaaa cgattatcaa
     8221 aagaaacgac aattccttga tcattttcat ttctcaaaag gcgacctaaa ccttgtctga
     8281 atcgcaacac agcttcaggt aagacataat ctttaaaaac attgtcaaac tcattggcaa
     8341 gtaacatcgg tttgacggca tgatgattca taaatggtaa tttcgcaatc atgacacatt
     8401 taataccgtg cgcctgataa tcaaatcctt caaaaaatgt actcgtccct agtaatattg
     8461 ctttatcaaa atgattgaac tgttgcacga ttttataatt ttgactttgt tgctgtgaca
     8521 atatcacata atcgtcaaat tcagccattt gatttaaata atccatcaca ttgtataaca
     8581 ttttatagct cgtgaagaga acgagacact tactgtccac agtcgtgacg taacgggcaa
     8641 tatattccac aatcgtttgg atatattctt cttgattttg ataattgtaa cgtttaatat
     8701 cattcggcac aaagatgtgt gcattggcgt tatgttgatg ttctgacgta atcttgtacg
     8761 tttggaaatg cacatcttct tcaaaccact tttgataatt tttaaaggag ccattaaacg
     8821 tcagtgtgcc tgaaacgaac gaaatcgatt cgaactgttt taaaattttc tccgttaaca
     8881 gatgtttgat cgatgcgtct ttaagatgaa ttttaatcgt cgacttttgt tggacatttt
     8941 ttaacgtaat ataaaacaaa tgccctgctt tcaaccccgt ttcgatttct cgtaattgat
     9001 ccacaatata aagcaaatgt ttacgcagcg ttttgaccac tttatgtttc atattattga
     9061 aatgctcaag tgtgacatta attttggaaa tgtattgatg taacaacgga atcaattgat
     9121 cccgtttcat atcataggca taatgtaatt tcgatgtttc atcatcatat aactgacctt
     9181 catgcacttt attgaaaata tggtcaaaaa agtgttcgtt catatcgtga atttcattaa
     9241 tgtcttgctt aatgctaaaa acatcaatcg gtggaatatc taacttttgt aaaatacgtt
     9301 gttgctcgag ttgatcgatt tgttttagca gtttttcatt ttctgtttta ccgattagcc
     9361 ctaattggta cttaatatcc gcataaccga acgcatgaat ggcacaatca atcgcatagt
     9421 cgggcaatcg atgtgcttca tcaataatgc aatgtttgaa catttgatag agtgtatgtt
     9481 caggtgatga atataacaaa tgcgcatgat ttgtaatgcc gatttgaatt ttggatgcat
     9541 tcgttcgaat atggttgtaa taatgaaaat ctttacgtat agggacatac gtttcgattt
     9601 tttgttcaaa atacattttt tggccaccgc gtaagttcag ttcttgaata tcacctgtcc
     9661 gtgtttctaa tatccagatg agcaattgca tttttaataa attaacatca taattggtcg
     9721 tttcatcttt taatacttgg ctgatgagac caagcgagat atagtcttgt ttacttttga
     9781 ttaacgtcgc attgatcgat acattaagtg cttcgttaat tttcggaata tcttgtaata
     9841 acaattgatt ttgtaacatt tttgtattcg ttgaaatcat gacgtgttcg cctgtctcaa
     9901 tataatacat taaagatgcg actaaataag ctaatgattt tccactacca gtatcggctt
     9961 caataagtgc tttttcgtta tgcattaact ggtcaaacac aatttgcgcc atataaagct
    10021 gttcttcacg atattggtaa tgacagacgt cgacaattgt ttgatataaa gcggtcaaat
    10081 taccgtcaaa ctgaatgtga ctgacttcaa aatcaggtgg ggcaagataa taaatttgtt
    10141 caaactgatt taatccagtc atttcttttg tcgcatcatg taaacggact tgttcgaaaa
    10201 aatagtcgtc caattgatat tttaattgtt tgcttaaata atagagctgt ttcttcgtgt
    10261 taatcggtaa aacctcgaac ttctcaaacg ccaaaatcat gatacgcgct gttgtatacg
    10321 cgtcttcatc tgcgcggtgt gcttgtgtaa gcggaatacc taatgattcg gctaactctg
    10381 tcagttgata gcttttctct gttggaaacg caattttaaa gagttccaat gtatcaatga
    10441 cttttttcgg ttggtaatga atatgacatt ttttgaatga acgttttaaa aaattaagat
    10501 cgaaatttac attatgtgcg acgaaaatac aatctttaat ttttgaataa attttatgtg
    10561 cgacttcttt aaaataaggt gcttgattta acatttcttc ttcaatggaa gtcaatgctt
    10621 gtataaaagt cggaattgtt aaatcggttt tgatcattga gtgatagtgg tcaataattt
    10681 ggttgttacg aacaaaagta atacctattt gaataatctc atcataatct gcttggttgc
    10741 ctgtcgtttc aagatcgaca acagcataac agggttgatg cgccatatgc cccctccttt
    10801 ctctctttat agattaaaat tcaatatctg cactcattaa acggtggaaa tcaccatctc
    10861 gatcaacgac aagtaaaaag ccttggtcat caatttccat tacgttacca taaaattgtt
    10921 gtttgccttc tgtaaaacgt aattgtttat tccaaatatt tgagcgctga atatattcat
    10981 ctttaatggt tgtaaaaggc tcagtcaaaa attgttgata acgtacttca atgcgttgca
    11041 tcaattgttc taaaaagtca tagcggttaa taatttttcc gtactgcaat ttaacactcg
    11101 ttgcagtttg ttgtaatgct tcgtcaaaat cttcaacatc gtgatttaaa ttaatgccaa
    11161 taccacaaat gacagcctca atcccatctg catttgctac catttccgtc agaaacccgc
    11221 atactttttg accttctatg taaatgtcat ttggccattt aatttcaact tttgctggac
    11281 tatatgactg aatcgcttca ctgattgcta atgacataaa taaattaaac gtcgtcagca
    11341 ttgaaaaagg aatgtctggt cttaaaacga gtgacatcca taaacctttg ccttttgatg
    11401 attgccaaac acgtttgaaa cgcccttttc ctgctgtttg ttcatcgctt aaaatgagca
    11461 tagtacgatc atcgtttaaa attgcctttt tagcgacttg ttgtgtagag tctacagatg
    11521 gatatgtttg aaattgattg ataaatgatt gatgtttaaa aattgaggtc aatacccctt
    11581 tatgccatgc ttgcggcaaa gcttttagct gatgcccttt attgtgaatc gaatcaattg
    11641 aaaacccctc tgctttaagt tggtccactg tttttttgac cgtcatccgt gaaacattga
    11701 gttgttctgc aatcgtctgc ccagaaatat agtcgggtct tgcatctgtt aatagttcta
    11761 atatttgatc aagatatttt gacatgtgtt ctcacccatt caatgatagc ttctgtttga
    11821 ttgttgactt gacgttgaat cacagcacat tcgacttgtc gtaaaacgtc tttgatccac
    11881 ggtccacctt ttaattggaa cgcttgcatt aaccatttac catctatggc taaatcttct
    11941 cgtgattgaa ttggtaaatc ttcccatacg gcttggagac ttgcactgct aaagataatc
    12001 ggtgatggta aatcaatttg gttatcttct aatatcggtc gcagttcatt aatttttagc
    12061 gcaacctcaa gaccaaaatc gtacgtaaat tgttggagct ggactttagt atctattgtt
    12121 tgtgcaactt gaatggccga tattaacgtt tgaattgtgc gaacttgtgc attactcagt
    12181 tttaaagact taaacgcttg atagtttgtg cgatagctga gaatggctaa aaatgcctcc
    12241 atatcaatcg gtgcatttat ttttatcgct gcgacatcga catctttgaa atacgggatg
    12301 taacgccaca attgcaaagc ttcaagtatg gggaaggttt tcgcaacaaa ggtcccttta
    12361 attaataatg ttagttcgtt cataatgcgt tcaatggata aatattccaa atccgacatt
    12421 tggtgtgcca tcgcttcaaa cgttgcctct tcaatcgtaa atccgagctg tgacttaaaa
    12481 cgtaaaccgc gcaaaattct taatgcatct tcgtcaaagc gtgtttttgc atcacctacc
    12541 gtacgaatga tacgctgttc aatatcacgt tcgccttcaa aatggtcaat acgttcatag
    12601 ttgatattca tcgctatggc gttcatcgtg aaatctcgac gttccacatc ttggtataaa
    12661 tccctgacaa aatatacttc tgtcgggcga cgatgatcca catattcagc ttcggcacgg
    12721 aaagtcgtca cttcataatt ttcgtgtgac catacgacat tgatggtacc atgttcttta
    12781 ccaatgggaa ttgtatgttc aaagagtgac tcgatttcat caggtgtcgc atttgtcgta
    12841 atatctacat cgtggatagg acgattcata ataaaatctc gcactgatcc accgacaaaa
    12901 taagcttcat atccattttg aattaaacgt tctaaaatag gtttggctaa ttcaaattga
    12961 gattgattca tgaattacaa ttcccctatc atttttttat aataatgttc atactgatcg
    13021 gcgataattt gtgaatcgaa ccgttttgca atatcgtgta acatattttc acgtaacgat
    13081 tgatataatg cactatctgt cagtaatttt agcgcgtagt cagctgcggt ttgactgtcc
    13141 ccgatatcca ctaaaaagcc tgtttcacga tgttgaatga cttcttgaat gccacctgca
    13201 cgtgtaccaa taggaacgac gcctgttttc atcgcttcta acagggtaag gccaaagctt
    13261 tccttttcac tcattaataa cacaatgtct gacatttggt aaaaattact catacaatct
    13321 tgtttaccta aaaagagtac atcatcagaa agacccattt cacggacttt tattcgcata
    13381 tcatgtaatt caggaccgtc gccaatcagc aacaatttgg attgaatgtg ttcgcgaatg
    13441 agagcaaatg tatcaataat cgtatcaatt cgtttaactt tacggaaatt tgacacatga
    13501 atcaatactt tttcatcttg agtaatgcca taactctctt ttaaatctgt attgtaaccc
    13561 gtcggaaatt cggattccct tacgaaatta taaatcggta caatctcttt ttgaggtgca
    13621 ataatctcat tcgtttcgtc ttttaatgat tcgctcacac tcgttacaat gtcactttgt
    13681 tcgatgccga atttaattgc atttcttaac gagtgatcat agccgagaac tgtaatatct
    13741 gtgccgtgca aagtcgtcat aattttaata tctttaccgg acatttgtct cgctaaaatc
    13801 ccacaaatcg catgtggaat tgcgtaatgc atatgaagca catctaagtc atactcattt
    13861 ataacatttg cgatttttgt acttaacgaa atatcataag gtggatattg gaatacagca
    13921 tattgattta cgtcaacttg atggaaagta atgttaggta ccggtttatt taagcgaaat
    13981 ggcatgtttg aagtaataaa atgcacttca tgcccacgtt cggccattaa aataccgagt
    14041 tctgttgcaa tgatccctga accacctact gagggataac aagtaatgcc aatcttcata
    14101 tagctcgtac tcctttatgt ctttctttca aaacgatttt tatcgcgttt gttgaatttt
    14161 ttcattgttt ggttaaagct ttttgtcata tcgatattaa gcgagtttgc gagacaaagg
    14221 agaacaaaaa ggttgtcacc tagttcagct tcgattgtat tttcagcctc actcgctttc
    14281 ttctttttct ctccatgata gtggttgatt tcacgtgcca attcaccaac ttcttctgtt
    14341 aagcgggcaa gatttgcaag cggagaaaaa taacctgttt taaactgtga aatgtatgta
    14401 tcgacttctt tttgcatatc agagagtgat cgattcatga tatgacatcc tttctgtttt
    14461 cattcttctt tatcttacat gaaatgtgtg gcgttgagca atctatgcac ctttttgata
    14521 gatgaaacac tattttttat agtagtactt tatcaatata attcaccaaa actaaaaaaa
    14581 gagctgggcg tctgtccccc aactcttttt cgcttactat tgatctgctg aacgtgcgat
    14641 taaaattaaa cgaacgagtt cagcaactgc aacggctgtc gctgcaacat aagtcatcgc
    14701 tgctgctctt aatacgcgac cggcatgttt atattctttt tcattcacga tatgcatttt
    14761 ttgtatttga ttcattgctc gtttacttgc gtcaaattcg actggcaacg tcacaatgga
    14821 gaacaataca gcaaatgcca ttaagaaaat accaatccat aacgctgttg aaccaatcgc
    14881 catgtgtaat gatgtcatga taatcccagc cataatgaaa atatatgaca tcgaactacc
    14941 gatgttcgct acaggtacta atgcactacg gaaacgtaaa aagaaataac cttcgtagtg
    15001 ctgaattgca tgccctactt cgtgagcggc aattgcagtt ccggcaacac ttggtttgtt
    15061 atagtttgaa ggtgacaata cgacgacttt gtttttcgga tcgtaatggt ctgttaaaaa
    15121 tccttgacct tctttgactt cgacatcata aatgccattt gcgtgtaaaa tttctaatgc
    15181 tacttctcgt cccgtcttgc cacttgttga tctaacttga gcatattttt catagttaga
    15241 tttaacttgg tgttgtgcat acattgggag gatcataagt ataataaaat aaataattaa
    15301 agacatgata gacattatgc tcactccttt ataatattat tgtactggct tcatcaaact
    15361 tggtcaatct ttttacccct gctgagtcga taaattacaa acaaaattgg caccactgat
    15421 aaccaaaatg cgaggtaacc aatttgtgct tcataatgtc caagtccgcc gtatactgga
    15481 tattgatgaa aaacgtaatc gatcacatca ttatggaaaa cccaaaagat tgtaatggct
    15541 atactcgtta acgtaaattt gaattgtggt aaaaataata cagcttgaat cgccataata
    15601 ccgtgagaaa taattaacag gacacccatc acataaatag tatcgtcctc tataaataac
    15661 agaaaattca tcatgactgc ccaaacgcca tatttcaata atgtgacaaa agcaagcgta
    15721 tcaatgatgg cactttgttt tttacataat agtaagatta agctgacgac taaaaataac
    15781 gtcgcagtgg gactatcagg aataaatggc caaaaatacc acgctgatct ataaagttgt
    15841 ggtgtatacc aaatataacc ataaagcgtc cccaaaatat tactcatgat aatcaatatg
    15901 agtattggac gttgatagaa caacatattt tgtagagctg tccacatgat tgagatccct
    15961 ttcgtcagtc attgtttaag ttttgtcagt aatgtgcctc aatttaatga gatttaatat
    16021 ttttgtatag tgcttaaata attgaatatc tttcaaattt aaacttaagt caatatgcga
    16081 ttttaataag tgaatgattt gctgctctgt actattagag aactcgatat gatacatatc
    16141 cttatgataa gcatctccat tttgcgttgc gagcagttgt tgcaataata aatggtcgag
    16201 acgtaaatca cgattagctt catggttaaa atgaatttta acgtccagtt gctgtgaatg
    16261 acgaatcact tggtgaaata tttcatcggt gttcatcaac aatgtctcac cttcatgata
    16321 ttgaatcgct atgacaggcg catccgacac agccatttct aaagtaggat gatctgctac
    16381 gatttggtcg acaaaatgaa ttttttcaat cagtgcatgg ttcgttttaa tgaaattcag
    16441 taaccataca ctgatacgag atttaaactg atagtgaaag agtaaatact cgataaagtc
    16501 acgtttttca aaatttaaac gtgtatctag cataaataat caccctaaag taatcgtcct
    16561 tgttctgcat cccactcagg gttaccacta tctttttgca acagtaattg aagaatggat
    16621 ttagctggtt cgatttgacc gatttcaatg agataatagt agtaatcttt taagaaatca
    16681 atgttgtcac gcatcgatgc aaacgctaaa ccgtaaaaat gttgtgcttc tttatcacgt
    16741 tcttcttgtc ctaatgcata tgcgagttgc cacatgaatt gaggatccat atcttcttca
    16801 tcgacatact gaactaattc aattaatgct tcataatcct ctttattacg taaaaagtca
    16861 gctaacatca gtaaaggttc ttgatagccc ggatccactt caagtgcttg ttttaataat
    16921 gtcacacctt cattttgatc gccatgttca atttgcaatg cacccgtact gtacatcaat
    16981 tctttataaa actggttgag acgtaaacct tcttgaccga tttcaatcgc atctccaaaa
    17041 gttttctcgt tttcataaag ctgttgtaaa tagtaatagc cttgaatgaa gtccggatct
    17101 ttttgaagta atgttttcac caacttaatc gcttcatgcg tcatgtcatt cttttcatac
    17161 gcaatcgctt ttttaagata atcatctgat gtcagttcat tgtcattaat ttcatcaaac
    17221 caacgtaggg catcggtata gtttccgctt tgaagactgc tgtctgctat acgtgagaat
    17281 aagttgacgc cattgatttc atactctcca ctctctagta cagtgtcata ctctcttgat
    17341 gcgcgcaaat attgaccatc atagtaaagt aattctgcta atgcaaaatg gacaatcgga
    17401 tcagcaggtt gtaactcgat tgcttgttca attttttcaa tcgcaatatc tatcatatta
    17461 atttgttgat ataaatcagc ttctaacatt aaacgttcag gtgtcagtgg tacttcattt
    17521 aagaactcta atgcttcatc tgtttgattt tctgaaataa gcccatcaat aaaatagatt
    17581 aaaatttcat cttcatctgg atatttcatg taaagcgtac gaaaaacttc aaggccttgt
    17641 ggtgtcagtc cgaattgata taatgtctca cccagtacaa acaatgcatt atcattatct
    17701 gattgcaatg cttcctgaac gcgagaatca agttgatcta atttttgtaa gttgatatcg
    17761 tcaattaatt tgtagatatc ttgcatacta tccctcattt tctaattgtt taagtagtgg
    17821 caaaaaccct gggaatgaca cattgacact ctcgaattgt gcaatctcaa tcggttctgg
    17881 tgtcataagt gaagcaactg ctaacatcat accgatacga tggtcgttat gactgtcaac
    17941 aggttgaatt tgactgattg ttgacggctt aatgatgagt ccgtcgtcag tcggttcaag
    18001 ttttagacct agcttaccga gttcgtttgc tgttgtatca atacggttgg tttctttcac
    18061 ttttaattct tcagcatctt ttatgatact tgaaccatgc gcttgtgtac agagtaacgc
    18121 aatcgtcggt aattcatcaa tgcatcttgg aatgagactg ccaccaattt ctataccttt
    18181 taagtcatcc gtatattgaa cacggatcgt cgcagttggc tctggaccat ttgtttgatt
    18241 tgaaagtgaa attttgccgc ccatgcgctc aacaatttcg ataattccat cacgtgttgg
    18301 gtttattccg acattatgaa gcgtaatgtc gctacctggt gtaattaatg ccgccacgat
    18361 gagaaagact gccgatgaaa tatctccagg cacatcgaaa tcacgcggtt gaatatgatg
    18421 aatcccttcc cctggtaggg tcactgttaa atcttgtgtt tgcacaggga taccataatg
    18481 ggcaaacatc gtctcagtat ggttacgtga caaatctatt tcgcgaatag tcgtcgtatt
    18541 ttgagcaaat aagcttgcaa acaaaatggc acttttaact tgtgcgcttg caactggcat
    18601 ttcataatgt attcctttga ctttacttga gccaatgatt agcggcgtgt agttatcttc
    18661 tacacctgaa atgttgacat tcatttgtcg aagtggttgg agcacgcggt ccataggtct
    18721 tttgccaata gacgcatctc cagatagcac actttgaatg cctaatccac caagtaatcc
    18781 ggccatcaat cgtgttgttg ttcctgaatt acctgtatat aacgtttggt gtggcgtttg
    18841 aaaatgagcg taaccaggag aatcaattgt aatggcttca tctgtaatgt ccattttaac
    18901 gcctaacttt tcaaatattt ttgctgtacg taaacaatct tcaccgagta aagggtgatg
    18961 tatgacagag tgtccttgtg ctaaagaagc aagcataatc gcccggtgcg tcatagattt
    19021 gtcaccaggt actgatgctt cacctatcag cggcccgtta atcataattt ttttcatcta
    19081 tatcacctca agatattgtt gtttgaatgt ctcaagtgct ttttctaata taggtatctc
    19141 aacatgttta acgattgggt cgccaattgc ttgtaacaga accatccgca caccctttgc
    19201 gtcatttttc ttgtcattgc gcataagttt taataagggt tcgaattcaa attggcgaat
    19261 gatatctagc ggataaccta aatgatttaa atatttcaag taatgtggaa catcaaaatg
    19321 cgtgcccaat aatagatttg aaacgataaa ttgatagaca atccctatca taacagcgtg
    19381 accatgtgca agttgatatt gatactcgat cgcatgacca aatgtatgac ctaagtttaa
    19441 aaattgacgt tgaccccgtt ctttttcatc attcaaaaca atttgcagct tcgtttgaat
    19501 cccgttaatt aaatactgtt caatcgcttg tagtgttttt aaatgcatgc tatcaggata
    19561 agcattttca agtatctgta ctgattgcgc attattcaac aatgcatgtt tatacacttc
    19621 accatagccg cttaaaattt ccgaataagg taatgaagtg aggaactcta aatcataaat
    19681 gaccgctttt ggacgatgaa aggcaccgac aagattttta ccatgtgtcg tattgatacc
    19741 cactttaccg ccaatactcg aatcatgagc aagaatcgtt gtaggtactt gaataaaatc
    19801 aacgccacgt aataatgttg ctgctaaaaa gccaacgaaa tcaccagttg caccgccacc
    19861 aattgcgatt aagcacgtat tacgtgtagg ttgatgtgca agaagcgctt caatataacg
    19921 ttcatactgc gccatatact tcacttgttc tcctgaaggg atttgaaacg tggtatatga
    19981 atgatggtga acgaacctag aaattttttg ttcccaagct gtatagacgt tttgatcgac
    20041 aaacacaaac acatgttggt agtcagaaac taacgcatct aattggttga atgcggcatg
    20101 ttcaataata atcggataat tgtggtccgg atatgtcgtt gttaattgca tgatttatca
    20161 cctgtcatta aaatgtttgg ttcagcgcgc gtctttcagc gacttgttgt gcgagacgtg
    20221 aaaagtcctg ggaaccgaac tcctctaaaa cacttctcgc aatttcatat gaaacagcat
    20281 gttcacaaac aatacttgca gcaggtaccg cacagctgtc agaacgttca attgttgctt
    20341 taaatggttc tttagagtca atatctactg aagcaagtgg tttatacaac gttggaatag
    20401 gcttcatcac accattcacg ataattggca taccgtttga cataccacct tctaaaccgc
    20461 cgagatgatt agatgcgcgg taatagcctt gttcctctga atataaaatc ggatcttgaa
    20521 tttcactgcc taatttttct gccgctttaa aaccttcacc gaaacttaca cctttaaatg
    20581 cgttaatgcc aacaacactt tgtgcaattc tgccatctag ctttctatca tagtggacat
    20641 aactaccgat tccgactggc atatggttaa caatgacttg gacgacaccg ccgatagaat
    20701 ctccctcttt tttggcacta tcaattttat cgcgaatcgc ttgtgcaata ctgtcgtcaa
    20761 tgacacggac atcattttta tcaatatttt caataatggt atcaatgtta taaatgccct
    20821 cgtcttttat gccgccgatt tcaatgacac ggctataaac gtcgatgcct aactgtttca
    20881 acaattgctt acaaagcgca ccaacagcaa cacgtgcggc tgtctcacgt gcagaagagc
    20941 gttcaagtac attacgcaaa tcacggtggt tatatttcat gccaccaacc aaatctgcat
    21001 gacccggtct tggtttcgta atgacgcgtt tcatattttc tttctcttct tctgaaatag
    21061 gtgccgcgcc cataatatta cgccaatgtg tgaaatcatc attcttaatg acgatcgtga
    21121 cagggctgcc taatgtataa ccatggcgca cacctgaaac gatttctacc gtatcctttt
    21181 caatttgcat acgacggcct cttccataac caccttgacg cttaaacatt tcttcgttaa
    21241 tttgatcaat atcaatagtc atatttgctg gtagcccttc aataatgaca gttaattgtg
    21301 gaccgtgtga ttctccagac gttaaaaatc tcaacatgat gagcactccc cctaccgttt
    21361 agttcatatg tttcatatca tagcacaaaa tagaaaa
//
LOCUS       DANHPA010000035        21344 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.035, whole genome shotgun sequence.
ACCESSION   DANHPA010000035 DANHPA010000000
VERSION     DANHPA010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 21344)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21344)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21344
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.035"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            166..1449
                     /locus_tag="PTC28_001065"
     CDS             166..1449
                     /locus_tag="PTC28_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002457511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HDK5716361.1"
                     /translation="MKQLNVALLGLGTVGSGVVKIIEENHQQIKETIQKDIQIKHILV
                     RDKSKKRPLNISRYHLTEDVNDILNDDDLDIIIEVMGGIEPTVDWLKAALSQKKHVIT
                     ANKDLLAVHLRVLEDLAEANGVALKYEASVAGGIPIVNAINNGLNANNISKFMGIFNG
                     TSNFILTKMTEDGAPYETALQQAQDLGFAEADPTDDVEGIDAARKVVITSYLSFNQVI
                     TLNEVKTEGISGVTPQDIDTAKILGYKIKLIGKGSYAQGKIDASVRPTLIAHAHQLAA
                     VENEYNAIYVIGDAVGETMFYGKGAGSLATGSAVVSDLLNVALQFESNLHTLPPHFEL
                     KTEATKEMMDDGETVTLKEKESYYFVVNTPETSLKQVESTLKSHLPFHKSLQVIELSP
                     TTFAGIVVGIDTDPTSYVEQEADYQVEKIYPVEGV"
     gene            1455..2519
                     /locus_tag="PTC28_001066"
     CDS             1455..2519
                     /locus_tag="PTC28_001066"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HDK5716362.1"
                     /translation="MKLWKGLVEEYKAFLPVDENTPTVTLNEGHTPLIYCDTMSEMLG
                     IELYVKYEGANPTGSFKDRGMVMAVTKAKEQGKKMVICASTGNTSASAAAYAARAGLK
                     AIVVIPEGKIALGKLSQAVMYGAEIVSIEGNFDEALEIVKEVAEDGEIELVNSVNPYR
                     IEGQKTSAFEIVEQLADQAPDILAIPVGNAGNITAYWKGFKTYEEKYQTGLPHMFGFQ
                     AAGAAPIVNNQVVKNPETIATAIRIGNPASWKQAVQAIEESDGLIEAVTDEEILEAYQ
                     LMTSKEGIFSEPASNASIAGLIKLHRQGKLPQGKKVVAVLTGNGLKDPDTAIGLLENP
                     IQALPNHKESIVQYIKDALK"
     gene            2519..3436
                     /locus_tag="PTC28_001067"
     CDS             2519..3436
                     /locus_tag="PTC28_001067"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002511052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HDK5716363.1"
                     /translation="MKKQLHLEIPASTANLGCGFDSIGMALNKFLRIDAHIIEEDQWC
                     FIHNGPHLVGLTEDETHYIYKIAQQVAAQYDVTLPMLEINMYSDIPLARGLGSSASAL
                     VGALFIANYFGDIELSQYELLQLATQIEGHPDNVAPTIYGGLVVGYHNAETKVTSIAH
                     IDVPAVDFIISIPEYELETVEARKVLPDRITHQDAVKYSAISNTMISAFIQHHYELAG
                     QMMEQDGLHEPYRQHLIRDFEAVKRIAHEHGAYATVISGAGPTILTMIKKENSGPLVR
                     ALRKYVEDCHSELATVNTSGVVSKVTHHF"
     gene            3623..4426
                     /locus_tag="PTC28_001068"
     CDS             3623..4426
                     /locus_tag="PTC28_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDK5716364.1"
                     /translation="MKPDLVVMDMDDTLMTSENRVSDKTKAYLLLLQKNGVKIALASG
                     RPTAGMLPTAKSLKMDEFGSYIMSYNGAQTIELSNEEVVSKKVIEKAEFDKIVDFCRE
                     HELFVLTYHDDTIIYEGEHEYMNIESELTGLPMKKVDDIKDYIQDAVPKVMGVDYEEH
                     IAELIKKMDGEFDNEVDMTTSKPFFLEFMSKGVSKGEAIKKLAERLDLDVNQMVAFGD
                     SANDIEMFKVVGKAVAMNNASDEVKSYADMVTKSHDEDGIPYALDQILS"
     gene            complement(4580..4894)
                     /locus_tag="PTC28_001069"
     CDS             complement(4580..4894)
                     /locus_tag="PTC28_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716365.1"
                     /translation="MIGQTNLFDDVLKTEERFVIVVQVLEEKNGKLLKRTLREYSSLT
                     HEQMESLFQHLKELYSETDFEASQSAFAITVYTNLDYAADQVYAHIKRHRGKHEWTHT
                     AK"
     gene            complement(5068..6519)
                     /locus_tag="PTC28_001070"
     CDS             complement(5068..6519)
                     /locus_tag="PTC28_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDK5716366.1"
                     /translation="MEEKNLSRGLQSRHITMIAIGGAIGTGLFVATGGVIAQAGPGGA
                     ILAYLVIGVMLYFLMSSIGEMATFYPVSGAFSSYANRFVDPSLGFTMGWLYWTIWSLV
                     TSVDIIVASSVINYWDAFHFFSPLVWSLIFLALLFLVNIFTVKAFGEAEFWLSLIKVV
                     TIIIFIVLGILMIFGILGGHYYGFKHFTTGEAPFVGGISGFLSVLLIAGFSVGGTEVV
                     AVTAGESDNPKTSMPRAIKQVFWRILLFYVLSIAVISAILAYTDPTLLNQSGSIAQSP
                     FTIVFDRVGIAFAASVINAVILTSLLSAANSGVFTTSRMLFSLSQDGQAPKFLGHIHS
                     RSQLPLRALYTTFIFIAAVTIYANFNPKSVMGLLNIIGALVTFVWASSIIAQIRLRRA
                     IKKQNKDINQLLPYQASFYPVGPIIVIATLLFLILGSSAEAFVHFDLAKLAQNFLPIF
                     ILLLVYIVHKLIHKTRIIPLEEIDLSEHESYRE"
     gene            complement(6873..7022)
                     /gene="rpmG"
                     /locus_tag="PTC28_001071"
     CDS             complement(6873..7022)
                     /gene="rpmG"
                     /locus_tag="PTC28_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001265708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDK5716367.1"
                     /translation="MRVNVTLACTECGDRNYITTKNKRTNPERIEMMKYCPRLNKHTL
                     HRETK"
     gene            7194..7463
                     /gene="rpsN"
                     /locus_tag="PTC28_001072"
     CDS             7194..7463
                     /gene="rpsN"
                     /locus_tag="PTC28_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009384394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HDK5716368.1"
                     /translation="MAKKSKIVKEQKREALVAKYAELRRELKAKGDYEALRKLPRDSS
                     PTRLTRRCKVTGRPRGVLRKFEMSRIAFREHAHKGQIPGVKKSSW"
     gene            7544..8521
                     /gene="guaC"
                     /locus_tag="PTC28_001073"
     CDS             7544..8521
                     /gene="guaC"
                     /locus_tag="PTC28_001073"
                     /EC_number="1.7.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015365036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP reductase"
                     /protein_id="HDK5716369.1"
                     /translation="MKIFDYEDIQLIPNKSIVKSRSEIDTSVQFGPKRFKLPVVPANM
                     QTVMNESLAEWFAQNDYFYIMHRFDEAARLPFVKKMQSKGLYASISVGVKLGEFEFID
                     ALKAENLTPEYITIDIAHGHSDQVIGMIQYIKEHLPKAFVIAGNVGTPEGVRELENAG
                     ADATKVGIGPGRVCITKIKTGFGTGGWQLAAVNHCSKAARKPIIADGGIRTHGDIAKS
                     VRFGASMVMIGSLFAAHEESPGETVEIEGKKYKEYFGSASEYQKGERKNVEGKKMFVE
                     HKGSLQDTLVEMQEDLQSSISYAGGKDVDALRKVDYVIVRNSIFNGDRD"
     gene            8527..9543
                     /locus_tag="PTC28_001074"
     CDS             8527..9543
                     /locus_tag="PTC28_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017174663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HDK5716370.1"
                     /translation="MFVIKKFLSITVVGIILLLLIPLQPNETFSKIATPFTQQIDQLV
                     EGKTNETTLKKPKSQNFALRNIQMNMSRNEVEQKLGPPESEIGNEYGTKWQVYHQDFS
                     NFVMVSYIDNKVHGLYTNQNMITSKSGVKYGTAKKAVRKELGQPIKGIQKGRTIYEND
                     NDEYDIFDKDGIYTTAFYDQHENNQLTGLMQISHQMENRLNSQYAAPSKYLQESFEKE
                     DYYLLNAERVQKGLQPLSYSNKLASTARKHSTDMAENQYFDHTNLKGESPFELIEKDG
                     HQYQTAAENLAYGQTSAIFAHHGLMNSSGHRKNILNEHVKTIGIGVDFNERHQPYWTE
                     NYIG"
     gene            complement(9756..10379)
                     /gene="lexA"
                     /locus_tag="PTC28_001075"
     CDS             complement(9756..10379)
                     /gene="lexA"
                     /locus_tag="PTC28_001075"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HDK5716371.1"
                     /translation="MRELTKRQNEIFEFIKHVVQSKGYPPSVREIGEAVGLASSSTVH
                     GHLSRLEEKGYIRRDPTKPRAIEIVNELMGEPVNMEETIYVPVIGKVTAGTPISAIEN
                     VEEYYPLPEHFTSTHNGQIFILNVMGDSMIEAGILDGDKVIVRSQSIAENGDIIVAMT
                     EEDEATVKRFYKEKNRYRLQPENSSLEPIYLEQVTVLGKVIGLFREM"
     gene            10524..10757
                     /locus_tag="PTC28_001076"
     CDS             10524..10757
                     /locus_tag="PTC28_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716372.1"
                     /translation="MLHIKSSDVYLFLSVFIISLILFLSFFLLATDASKTEQTYEMTD
                     HQLKTTPTEQQQKYEQQRNHTNEQSVVAVTLSH"
     gene            11024..11260
                     /locus_tag="PTC28_001077"
     CDS             11024..11260
                     /locus_tag="PTC28_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF896 domain-containing protein"
                     /protein_id="HDK5716373.1"
                     /translation="MLSKEKLNRINELANKKKSEGLTETEAKEQSQLRSEYLEVFRSS
                     FKSQIENTKVIDPDGNDVTPEKLKEVQKQNQLRS"
     gene            11365..13350
                     /gene="tkt"
                     /locus_tag="PTC28_001078"
     CDS             11365..13350
                     /gene="tkt"
                     /locus_tag="PTC28_001078"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HDK5716374.1"
                     /translation="MSQRNDSLAINTIRGLSIDAIEKANSGHPGLPMGAAPMAYTLWT
                     RHLNFNPKSHEYFNRDRFILSAGHGSALLYSLLHVSGSLELDELKQFRQWDSKTPGHP
                     EYHHTQGVEITTGPLGQGFAMSVGMAMAEKHLAAKFNKDIDVVDHYTYVLASDGDLME
                     GISHEAASLAGHLKLDKLITLYDSNDISLDGEASKAFSEDIKKRFEAYGWNHILVKDG
                     NDIEAIDKAIEEAKGQAGPTIIEVKTIIGYGSPNKSNSNASHGAPLGEEERNLTFESY
                     NLDPSKHFHVEDEVYDIFNSTMIQRADENEKAWKEKVEQYAEKYPELYKEFEDAMAGK
                     LPEGYENELPKFELGHKGASRADSGDVIQALSKAVPTLFGGSADLASSNKSNVKNETD
                     FSAENGVGKNVWFGVREFAMAAAVNGMAAHGGLHPYGATFFVFSDYLKPALRLAAIMG
                     LRSTFVFTHDSIAVGEDGPTHEPIEQLAGLRAIPNLNVIRPADGNETRVAWKVAVESN
                     GTPTALVLTRQGLPVLDVEESTVEEGVRKGAYVVFETEKSPEYVLLASGSEVSLTVDV
                     AKALEEQGKGVRVISMPNWNAFENQSKAYQDEILLPHVEKRAAVEMAASLGWHKYVGM
                     NGVVVGIDRYGASAPGDLVVEKYGFTKDNVLAEIEKL"
     gene            13508..13735
                     /locus_tag="PTC28_001079"
     CDS             13508..13735
                     /locus_tag="PTC28_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YneF family protein"
                     /protein_id="HDK5716375.1"
                     /translation="MATWLAILLIVIALIGGLVGGFFLARKYMMDYLKKNPPINEEML
                     RMMMMQMGQKPSQKKINQMMTMMNKNMDKKM"
     gene            13983..14450
                     /locus_tag="PTC28_001080"
     CDS             13983..14450
                     /locus_tag="PTC28_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1453 family protein"
                     /protein_id="HDK5716376.1"
                     /translation="MTYLVLSILIAFVMGAGVIVIRMKAQKYPVNTKKIILPPFFMAT
                     GALMYVVPYFRLTGFEIIESVVLGVVFSSVLIMTSHFEVKGSQIYLKKSKAFPFVLVT
                     LLLFRTVLKVFLGNSVDPGELAGMFFLLAFSMLVPWRLAMLYRYKKIKDQIVA"
     gene            14609..15730
                     /locus_tag="PTC28_001081"
     CDS             14609..15730
                     /locus_tag="PTC28_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease SbcCD subunit D"
                     /protein_id="HDK5716377.1"
                     /translation="MKLIHTADWHLGKVLNGHSFLEDQQYVLKQLIEVLEREQPDALI
                     IAGDIYDTAYPSKYVIQLMEETIAKINLEIQIPVVMINGNHDGKERLRYGASWFRHNQ
                     LYITTEIEQFFEPVILGNVAIYTLPFFTLSEAREYLEVSVENYEEAVKKLVDQVRPQL
                     NPAMTNILVGHFTLTGAPKSDSERDITIGTIEAVSPQFLVDFDAVMLGHIHHPFASQY
                     RNVVYSGSLLQYSFSEVQQVKGVRLFHIEADQAIRQSFIPLKPARELEVVEASFDDIM
                     NGRFKRKSDDNYFHFNVEQLTHVKDPMQKLKQIYPNTLSLTQQTQPSSYQSKVLADVK
                     KLSPLDIVGQFYSEMTTDTLSETQKSNVIQLLETMNEEE"
     gene            15733..18765
                     /locus_tag="PTC28_001082"
     CDS             15733..18765
                     /locus_tag="PTC28_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC family ATPase"
                     /protein_id="HDK5716378.1"
                     /translation="MKPLKLHLQNFGPFLDETIDFSRIQSNQLFLISGKTGSGKTMIF
                     DGIVYALYGRASTEKREVKHLRSHFAAATKPLTVTFEFEISGRLYKVVREASFLKPGN
                     KNETKPKLEVYRHKAGRFELIESTIQAGERFILELLKLKQDQFRQLFVLPQGEFKEFL
                     VSNSSDKQTILRTLFNTQLYDMLKNRLTDKTKSMKNEIDQIYTKIQSAWDELYTLDHP
                     DLVVEKGLKSEQYDLMMAALPQFETIAEQQVSKVQEEKSKVEKELNSVNEAVERQILR
                     QQLSEQQIQLKMKLEQFEVRQLHIQQLEQQLKLMNESKMALKMYQNLQELEVALKRQQ
                     NEYEQLQNENENLEIEQIEQQQALETHLLQEDEMNQKAQYLERTRHFYQECKQLKEKY
                     TRMTNIEQTIQKLMQDNEEAMQTLEAIDKDDLERQPDYEKKSQLQTEQAVLVEKVATL
                     RIAQNHATLQARQQQQLQQYTEDLKRIDAEIAQKQANIQVISENEQQLLNHEQAVMTL
                     RATLSQNVPCPVCGQTVHHVEADADIEQIKKIQQENRIIEHTLEKLKEQKIKCDANIA
                     HTKAQLAEIGEVDFNEEDLKKAEAEQHDIKQKLEAIDKENSRIATIQEEVGRIHQVID
                     ENQQQIQLLKNEQEYIQERMDRFVAETAYDDIETFQSAFTQLKSAVDQFYQEKATLTE
                     RRDQLTTKIKEQQYEIQLCVHQIIERSKQVQTLNVDIDEALEALNIQNRETLLDILQD
                     SVYKEAYEQEVKTYHQEKQIVELKMQDVSQQLSAITVEDLDDLKVKQQQQRADFEDVQ
                     RRFNEYAFQATENQKTAQKINDEVTYLKNTLNEQIELFQLAEILSGKNAHNLTLENYV
                     LMHYLEQILLKANQRLLSMTGQRYELVRNEKKGRGFSGLEIEVFDYYSNQSRHITSLS
                     GGETFQASLALALGLSEVVQSEQGGIALDAMFIDEGFGTLDQETLETALDTLIQLQSS
                     GRLVGIISHVSELKNRIPIILEVVSKNYQSTTHLRSNE"
     gene            complement(18994..19353)
                     /gene="mscL"
                     /locus_tag="PTC28_001083"
     CDS             complement(18994..19353)
                     /gene="mscL"
                     /locus_tag="PTC28_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HDK5716379.1"
                     /translation="MLQEFKNFALKGNVLDLAIAVVMGAAFNKIVTSLVENIIMPLIG
                     LLFGEVDFAKNWSMYGIKYGIFIQSIIDFIIIAFALFIFVKIANTVVKPKEEEVVVEE
                     NIVLLTEIRDLLRKDSK"
     gene            19593..21227
                     /locus_tag="PTC28_001084"
     CDS             19593..21227
                     /locus_tag="PTC28_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HDK5716380.1"
                     /translation="MNSSTPEPNGKKFSPVFLVSAIIVFAIVLIGVFIPTQFGEFTNT
                     IKLWITDKLGWYYLILTTIIVFFCIFLIFSPIGKLKLGRPNDKPEFNTVSWFAMLFSA
                     GMGIGLVFYGAAEPISHFASPPNADPQSTEAFTESLRSTFFHWGFHAWAVYGVVALAL
                     AYAQFRKGEPGLLSKTLRPILGDHVDGLIGTIIDVLAVFATVIGVAVSLGMGALQISG
                     GLNYLFGLPNTIVTQSIIIVVVTILFIMSAWSGLSKGIQYLSNLNIGLGTLLLITGLI
                     VGPTVLILNMFTSSTGSLLNSFLFNSFDAAATNPQKREWMSDWTLYYWGWWLSWSPFV
                     GVFIARVSKGRSIREFISGVLLVPVIVSFIWFSVFGVLGIETAKKHKEIFDMSAETQL
                     FGVFNHIPLGIVLSIIALLLIASFFITSADSATFVLGMQTTNGSLNPSAFIKVTWGIA
                     QSLIAFVLLLSGGGDGEAGLNALQSAAIISALPFSFIVILMMISFYKDANKERKFLGL
                     TLTPNKHRLKEYVANSQQDYEDELISKRKGLREQEK"
BASE COUNT         7289 a         3536 c         4222 g         6297 t
ORIGIN      
        1 gagataccta ttcaaattaa ccaatactaa tggtaaaata gaactgtctt ttctaaattt
       61 ttagaacttt acaaactttg tgaatgaatt tatactaaac catatttaca tatatttcaa
      121 tagaacatga gtaatttcat cagatttgat tcggagggaa aataaatgaa acaacttaat
      181 gttgcattat taggattagg gactgtcggt tcaggagtcg ttaagattat tgaagagaac
      241 catcagcaga ttaaagaaac gattcaaaaa gatattcaga ttaagcatat tttggttcga
      301 gataaatcca aaaagcgacc gctaaatatt tcacgttatc atttgacgga agatgtgaat
      361 gacattttaa atgatgacga tttggatatt atcatcgagg tgatgggtgg tattgagccg
      421 accgtggact ggttaaaagc agcattaagt caaaagaaac acgtgattac tgccaataaa
      481 gacttattag cggtgcacct acgtgtctta gaagatttag ctgaagcaaa cggtgtcgcg
      541 ctcaaatatg aagctagtgt tgcagggggt atcccgattg tcaatgccat taacaacggt
      601 ttaaatgcaa ataacattag taaatttatg ggaatcttta atggtacttc caattttatt
      661 ttgacaaaga tgacagagga cggcgcacct tatgaaacag cattacaaca agcgcaagat
      721 ttaggtttcg ctgaggcgga cccaactgat gacgtagaag gtattgacgc agcacgaaaa
      781 gttgttatta catcgtattt atcatttaat caggtcatta cgttaaatga ggttaaaaca
      841 gaaggcatca gtggcgtgac accgcaagat atcgatacag ccaaaatatt agggtacaaa
      901 attaaactca ttggtaaagg ctcatatgcg caaggcaaaa ttgatgcgtc cgttcgtcca
      961 acgcttattg cacatgcaca ccaactcgct gctgtcgaga atgagtacaa cgcgatttat
     1021 gtcattggtg atgcagtcgg tgagacaatg ttttacggta agggcgctgg aagtttagct
     1081 acaggttcag cagttgtgag tgacttactc aatgttgcat tacaattcga atcgaacttg
     1141 catacattac cacctcattt tgaattaaaa acggaggcaa cgaaagaaat gatggacgac
     1201 ggtgagacag tgacattaaa agaaaaggaa agttattatt ttgtagtgaa tacacctgaa
     1261 acgtcactta aacaagtgga atcaacttta aaaagtcact taccattcca taaatcgctt
     1321 caagtgattg aactctcacc gacaacattt gcagggattg ttgttggaat tgacactgat
     1381 ccgacatctt atgttgaaca agaagccgat tatcaagttg aaaaaattta tccagttgaa
     1441 ggagtttgat acgtatgaaa ttatggaaag gtcttgttga agaatacaaa gcatttctac
     1501 cagtagatga aaacacacca acagtgacgt taaatgaagg gcatacgcca ctcatttatt
     1561 gtgacacgat gtcagagatg ttaggcattg aactgtatgt taaatatgaa ggcgctaatc
     1621 caactggttc attcaaagat cgaggcatgg tcatggcagt cacaaaagcg aaagagcaag
     1681 gcaagaaaat ggtgatctgt gcctcgacag ggaatacatc ggcttctgct gcggcatatg
     1741 cggcgcgtgc aggtttaaaa gctatcgtcg tcattcctga aggtaagatt gctttaggaa
     1801 agttgtcgca agctgttatg tatggtgctg aaatcgtctc tattgaagga aactttgacg
     1861 aagcgttaga aatcgttaaa gaagttgctg aagatggaga aatcgaatta gtcaactcag
     1921 tcaacccgta tcgtattgaa ggtcaaaaaa cgagtgcttt tgaaattgtt gagcagttag
     1981 ctgaccaagc accagatatt ttagctattc cagtaggtaa cgccggaaat attactgcat
     2041 attggaaagg ttttaaaacg tatgaagaaa aatatcaaac aggcttacca catatgtttg
     2101 gattccaagc ggcgggtgct gcacctatcg ttaacaatca agtcgttaag aaccctgaaa
     2161 caatagctac agcgattcgt atcggtaatc ctgcaagttg gaagcaagca gttcaagcga
     2221 ttgaagaatc tgacggttta attgaagcag tcacagatga agaaatttta gaagcgtatc
     2281 aactgatgac ttctaaagag ggtattttta gcgaacctgc aagtaacgca tcgatagccg
     2341 gacttattaa attacatcgc caaggaaaat tgcctcaagg taaaaaagtg gttgcagttt
     2401 taactggaaa tggtttgaaa gatccggata cggcgattgg tttattagaa aatcctattc
     2461 aagcattacc aaatcataaa gaaagtatcg ttcaatacat taaggacgcg ttaaaatgat
     2521 aaaaaaacaa ctacatttag agattccagc ttctacagcg aacttaggct gtgggtttga
     2581 ttccattggt atggcgctga ataaattttt acgtattgac gcccatatca ttgaagaaga
     2641 tcaatggtgt tttattcaca atggcccaca tctcgttggc ttgactgaag acgaaacaca
     2701 ttacatttat aagattgcac aacaagtcgc tgctcaatat gacgtaactt tgcccatgct
     2761 tgaaattaat atgtacagtg atattccatt agcgcgcggc ttaggttcat ctgcttcagc
     2821 gttagtaggg gcactattta tcgctaatta ctttggagat attgagctat cgcagtacga
     2881 attattgcaa ttggcaacac aaattgaagg gcatcccgat aatgttgcgc caacgattta
     2941 tggtggttta gtcgtgggct atcataacgc tgaaacaaaa gtgacaagca ttgcgcatat
     3001 cgatgtgcca gcggttgact ttattatttc catacctgag tacgaacttg aaacggtgga
     3061 agcacgcaaa gttctacctg acagaattac acatcaagat gcagttaaat atagtgccat
     3121 tagtaacacg atgattagtg ctttcattca acatcattat gaactcgctg gacaaatgat
     3181 ggaacaagat ggattgcacg agccatatcg tcaacattta attcgtgatt ttgaagcggt
     3241 aaaacgcatt gcccacgaac atggtgcata tgcgactgtg atttccggtg cgggtccaac
     3301 aattttaaca atgattaaaa aagaaaacag tgggccactc gtgcgtgctt tgcgcaaata
     3361 tgttgaagat tgtcattctg aacttgccac tgtaaataca tcaggtgtcg tatcgaaagt
     3421 aacacatcat ttttaagtat tcatattgtg cgaaagattg ggagcatttc attgtttcct
     3481 agtctttctt ttttgagtga cattaagatt aagacagaag cgcgtcaaaa gcttgatgtg
     3541 catgctttga tttaggcttc tatcattttg aatttactgc agtttagtgt aagataaaat
     3601 caaattgaaa ggagttttgg agatgaaacc agatttagtc gttatggata tggatgacac
     3661 gttaatgacg tccgaaaacc gtgtctctga taaaacaaaa gcatatttat tattacttca
     3721 aaaaaatggc gtaaaaatcg cacttgcctc aggtcgtcca acagcgggga tgttaccaac
     3781 tgcaaagtca ttaaagatgg atgaatttgg aagttatatt atgagttaca atggggcaca
     3841 aacaattgaa ctctctaatg aagaagttgt ttcgaaaaaa gtcattgaaa aagcagaatt
     3901 cgataaaatt gtagactttt gccgtgaaca tgaacttttc gtattaactt atcatgatga
     3961 tacaattatt tatgaaggcg agcatgaata tatgaatatc gaatcagagt tgacaggatt
     4021 gcctatgaag aaagtggacg atattaaaga ctatattcaa gatgctgtgc ctaaagtgat
     4081 gggtgtcgat tatgaagagc atattgcaga attgattaaa aaaatggatg gcgaatttga
     4141 taatgaggtc gatatgacaa cgagtaagcc gtttttcctt gaatttatga gtaaaggtgt
     4201 atctaaagga gaagcgatta aaaaattagc tgaacgttta gatttagatg tgaatcaaat
     4261 ggtggcattc ggtgacagtg caaatgatat tgaaatgttt aaagttgtcg gaaaagctgt
     4321 tgcgatgaac aatgcgtcag atgaagtgaa atcatatgcg gatatggtca caaaaagcca
     4381 tgatgaagat ggtattccgt acgcattaga tcaaatattg tcataaacta tccaatgaaa
     4441 gcaagagaag atcgttgaat aatgagcgat ttcgaccttg ctttttgttt gttctaaaat
     4501 cgtgtgagat gaaatggtca tataaatatg ttgggcagta aaaaagaagc actcctcaac
     4561 agagcacttc aaagattcac tattttgcgg tatgtgtcca ctcatgtttg ccacgatgac
     4621 gtttaatatg cgcatacact tgatctgcag cataatctaa atttgtgtac acagtgatgg
     4681 caaacgccga ttgagacgct tcaaaatcgg tctccgaata caactctttt aaatgttgga
     4741 ataaactttc catttgttcg tgcgttaaac tactatactc tcttaacgtc cgtttcaaca
     4801 actttccgtt tttctcttct aaaacttgta ccacaatgac aaagcgttct tcagttttta
     4861 aaacatcatc gaaaaggttt gtttgtccta tcatcacgtg cccaccttta caatttatta
     4921 atttaattat acatgaaatc gcaatatgta ggaaatggaa tagtcaagtt ttttaatgaa
     4981 attcatcttt tcaaacacga tgttattgta atggaagtaa aatagacgaa aaaaagagcc
     5041 ctacacggaa ggctccttta tttgagtcta ttcgcgataa gattcatgtt cgcttaaatc
     5101 aatctcttca agtggaatga tgcgtgtctt gtgaatcaac ttatgaacga tatagacgag
     5161 tagcaaaatg aaaataggta aaaagttttg tgctaatttc gctaaatcaa aatgaacaaa
     5221 tgcttcagct gaactaccga gaattaagaa taacaacgtt gcgataacga taataggtcc
     5281 aacagggtaa aatgacgcct gataaggtaa caattgattg atatctttat tttgcttttt
     5341 aatagcacgt cgtaatctga tttgagcaat aatacttgag gcccaaacaa atgtaacgag
     5401 ggcaccaata atattgagca agcccatgac actttttgga ttaaaatttg cataaatcgt
     5461 aacggctgca atgaaaataa atgttgtgta taaagcgcgt aatggcagtt gtgaacgtga
     5521 atgaatgtga cctaaaaact ttggtgcttg tccgtcttga cttaatgaga acaacatacg
     5581 acttgtggta aaaacacctg aatttgcagc tgaaagtaat gatgttaaaa tcaccgcgtt
     5641 tataacagaa gctgcaaaag caataccgac tctatcaaaa acaatcgtaa atggactttg
     5701 agcgattgaa ccactttgat tgagtaatgt tggatctgta taagctaaaa tggcagaaat
     5761 caccgcgata gacaacacat agaataataa aatgcgccaa aaaacttgtt tgatcgcacg
     5821 tggcatggac gttttcggat tatctgattc acccgctgta actgcaacga cctcagttcc
     5881 accaacggaa aagcctgcga ttaataagac gcttaagaat cctgaaatgc ccccaacaaa
     5941 tggtgcttca cccgttgtaa agtgtttaaa accgtaataa tgccctccta aaataccgaa
     6001 aatcattaaa atgcctagga cgatgaaaat aataatcgtg acaactttaa ttaaagatag
     6061 ccaaaattca gcttcaccaa acgctttaac ggtaaagata ttcactaaaa ataataaggc
     6121 taaaaagatt aaactccata caagcggtga gaagaaatga aatgcatccc aatagttaat
     6181 gacactcgat gcaacgataa tatctacact tgtgacaaga gaccaaattg tccagtataa
     6241 ccaacccatc gtaaaaccta aagatgggtc tacaaaacga ttggcataac tactaaatgc
     6301 tccagacaca gggtaaaaag ttgccatttc tcctattgat gacattaaaa agtataacat
     6361 caccccgatg actaaataag caagtatcgc gccacctgga ccagcttgag ctatcacccc
     6421 accagttgcg acaaagagcc ctgtaccaat cgcgcctcca atggcaatca ttgtaatatg
     6481 tcttgattgg aggcctctac ttaaattttt ttcttccata catatcttct cctcaacaat
     6541 tagctttcta tatattttac ttgttaaggg gatgagtttc aataaaaatt tgcgacttta
     6601 aagcgataaa atatcgaggg gattaaaatt gagtatgaaa aatagaaaat acggtggaga
     6661 aattcatcat gatacaaagg gtgtaagcag ttttgcggct aatatgtaga atagttgtat
     6721 aatgaaaagg taaataaaaa agtcaaatga tgtttgaaat catttgactt atgtcgtatt
     6781 ttaattataa gcaaggtgac gcgctcgcta acgcattgat gtacttgtgt aataagcgtc
     6841 gcacaatcaa tgacagtgat tattcactat gattattttg tttctctgtg taaagtgtgt
     6901 ttgtttaatc ttgggcaata cttcatcatt tcaatacgct caggattagt tcgtttgttt
     6961 ttagttgtga tgtagttacg gtcaccacat tcagtacatg ctaaagttac atttacgcgc
     7021 atgactagtc cctccttttc aaattgaaac tattacgatt tattatttta gcacgagcca
     7081 agcattttgc caactctttt ttattttcat caattaaagt cttgccaaga agaagaggca
     7141 tgtgctaata tgtaaaacgt aattattacg atttgtaagg agtgttcata tatatggcta
     7201 aaaagtcgaa aattgtaaaa gagcaaaaaa gagaagcatt agtcgcaaaa tatgctgaat
     7261 tacgtagaga attaaaagca aaaggcgact atgaagcgtt aagaaaatta ccaagagatt
     7321 cttcaccaac acgtttaaca cgcagatgta aagtgacagg tcgtcctcgt ggtgtgctac
     7381 gtaaatttga aatgtctcgt attgcattta gagaacatgc tcataaaggt caaattcctg
     7441 gcgttaaaaa atcaagttgg taaagcgacc ccctctttat tttactttgt tccttaaagg
     7501 tagtatatta tcaaaggaat aaaaagataa aggggctttt tttatgaaaa tttttgacta
     7561 tgaagatatc caactcatcc cgaataaaag tattgtaaaa agtcgttcag aaatcgatac
     7621 atctgtacaa tttggcccga aacgttttaa attgccagtt gtgccagcta atatgcaaac
     7681 agtgatgaat gaatctttgg cagaatggtt tgcgcaaaat gattacttct atattatgca
     7741 ccgatttgat gaagcagcgc gtttaccttt tgtcaaaaag atgcaaagta aagggttata
     7801 tgcttcaatt tctgtaggtg ttaaacttgg agaatttgaa tttattgatg ccttgaaagc
     7861 tgagaatctt acaccagaat atattacaat tgatattgca catgggcatt cagatcaagt
     7921 gattggcatg attcaatata ttaaggaaca tttacctaaa gcgtttgtga ttgcaggtaa
     7981 tgtcggtaca ccagaaggcg tgagagaact tgaaaacgcg ggtgctgatg caacgaaagt
     8041 cggtattggt cctgggcgtg tttgtattac aaaaatcaaa actggatttg ggacaggtgg
     8101 atggcaatta gctgcagtca atcattgtag taaagctgcc cgtaaaccta ttattgcaga
     8161 cggtggtatc cgtacacatg gcgacattgc aaaatcagtg cgctttggtg catcaatggt
     8221 catgattggt tctctctttg cggctcatga ggaatcaccg ggtgagacag tggaaataga
     8281 aggtaaaaaa tataaagagt actttggcag tgcgtcagaa tatcaaaaag gtgaacgtaa
     8341 aaatgttgaa ggcaaaaaga tgtttgtcga acataaaggc tcacttcaag atactcttgt
     8401 agagatgcag gaagatttgc aaagctcgat ttcttatgca ggtggcaaag atgtagatgc
     8461 cttaagaaaa gtagattatg tcatcgtacg caattctatc tttaacggag accgtgacta
     8521 aaggagctgt tcgttatcaa aaaatttctc tcaatcaccg ttgtaggtat catactttta
     8581 ttactcatac cacttcagcc gaatgagaca ttttctaaaa ttgcgacacc atttacccaa
     8641 caaatcgatc aacttgtaga aggtaaaacg aacgaaacaa cacttaaaaa gcctaaatca
     8701 caaaattttg cacttagaaa tattcagatg aacatgagtc gtaatgaagt cgaacaaaaa
     8761 ctcggtccac ctgagtcaga aattggtaat gaatacggaa caaaatggca agtttatcat
     8821 caagatttta gtaacttcgt gatggtcagc tatattgata acaaggtgca cggtctgtat
     8881 acaaatcaaa atatgattac atcgaaaagt ggtgtgaaat acggaacagc taaaaaagcg
     8941 gtacgtaaag aactgggtca accgattaaa gggattcaaa aaggtcgcac catttatgaa
     9001 aatgataacg atgaatacga tatatttgat aaagacggga tttatacgac tgcattttat
     9061 gatcaacatg aaaataatca attaacagga ttaatgcaaa tcagtcatca aatggaaaat
     9121 agattgaaca gtcaatatgc agccccatca aaatatttac aagaaagttt tgagaaagaa
     9181 gattattatt tattaaatgc tgagagagtt caaaaaggat tgcaacccct tagctattcg
     9241 aacaaattag ctagcactgc gcgtaagcat agtacggaca tggctgaaaa tcaatatttt
     9301 gaccatacaa atcttaaagg ggaatcacca tttgagctta ttgaaaaaga cggccatcaa
     9361 tatcagacag cggcagaaaa cttggcatat ggtcaaacga gtgcgatttt tgcgcaccat
     9421 ggattaatga attcaagtgg gcatcgtaaa aatattttga atgaacatgt caaaacaatc
     9481 ggtattggtg tagactttaa tgagagacac cagccgtatt ggactgaaaa ctatataggc
     9541 taatgttttg aatggtaatt ttggggaata gcaatcgtgg aagtgattta aatgacatca
     9601 aagcagaatc attcaaagca aaatactttg aataaaaagc aatcacaaga tgatatttta
     9661 atacaagtga aaaaaattct gaataaaaat tagcaagcgc ggaccttaca tataagttgt
     9721 aaggtccatt ttttgaagga gtggtttacg caagattaca tttctctaaa taagccaatg
     9781 actttaccta atactgtaac ttgttctaga taaataggtt ctaaactact attttctggt
     9841 tgtaaacgat aacgattttt ttctttgtag aaacgtttta cagtagcttc atcttcctca
     9901 gtcattgcaa caatgatgtc accattttca gcaatcgatt gacttcttac aataacttta
     9961 tctccgtcta aaataccagc ttcaatcata ctatctccca taacgttaag tataaaaatc
    10021 tggccgttat gtgtcgatgt aaaatgttca ggcaacggat aatactcttc aacattttca
    10081 atagcagaaa taggtgtccc tgctgtaact ttaccgatga cagggacata gattgtttct
    10141 tccatattca caggttcgcc catcaattca ttcacaatct ctatagcgcg cggttttgtt
    10201 gggtctcgtc gaatatagcc cttttcttct aaccttgaca aatgcccatg tacagtcgaa
    10261 cttgaagcta accccacagc ctcaccaatt tcacgaacac ttggtggata cccttttgat
    10321 tgcacgacat gtttaataaa ttcaaatatt tcattttgtc ttttagttaa ttctctcatt
    10381 ttccacactc cttctcagta ctatttgttg atattataac ataccacgcg aacattaaca
    10441 aacgtttgtt cgttttagtg ttgacataga acattcgttc tgttagatta ttaatacaaa
    10501 caaatgttcg aggagtgacg aagatgcttc atattaaaag ttcagatgtt tacttgttct
    10561 tatcagtgtt tatcatttct ttaatcttat ttttatcatt ctttttactc gccactgatg
    10621 caagtaaaac agaacaaacg tacgaaatga cagatcatca acttaaaacg acaccaacag
    10681 aacaacaaca aaaatacgaa cagcagcgta accatacaaa cgaacagtcc gttgtagctg
    10741 tgacgttgag tcattaaata agccatacaa agaccgtagt gaaaaaaagg ttcaggtgat
    10801 tttctctatg gtctttttct agtttcttct ttaatacatg taaattcatt aaaaaacacg
    10861 aaatggtctt tttagtagat ggaattacta tacgagaaaa agtgttagct tggaataacg
    10921 ctcaaacaat gacagcgctt acttttatgc tgagttcaag catttggttt tataacattt
    10981 ttctgttata tttttgtaaa gaaaatcacg gaggggagct catatgctta gtaaagaaaa
    11041 gttaaatcga attaatgaac tcgcaaataa gaaaaaaagt gaaggcctta ctgaaacgga
    11101 agcaaaagaa caatctcaat taagaagtga gtatttagaa gtatttagaa gcagttttaa
    11161 aagccaaata gaaaacacaa aagtgataga tccagatggc aatgacgtaa cgcctgagaa
    11221 attaaaagaa gttcaaaagc aaaatcaatt acgtagttag tatttttgaa cataatggat
    11281 aacgcggtgc catttattag gtttcagaca gtgtttcggt tataatgtaa ttatgatatg
    11341 gaatcagaaa ggaaggattt tcaaatgagt caacgaaatg atagcttagc tataaataca
    11401 atacgtggat taagtattga tgctattgag aaagcgaatt caggtcatcc tggtttacca
    11461 atgggggcag caccaatggc atatacttta tggacacgcc atttaaactt taatccaaag
    11521 tcacatgaat atttcaacag agaccgcttt attttatcag caggtcacgg atcagcattg
    11581 ctttatagtt tattacatgt gtctggttca ctcgaacttg atgagttaaa acaatttaga
    11641 caatgggatt ctaaaacacc tggacaccca gaatatcacc acacacaagg tgtagaaatt
    11701 acgactggac cacttggaca aggttttgcg atgtcagttg gtatggcaat ggctgaaaaa
    11761 catttagctg ctaaattcaa caaagatatc gacgttgttg atcactacac ttatgtattg
    11821 gcatctgacg gtgacttaat ggaaggtatt tcacatgaag cagcttcact tgcaggtcat
    11881 ttgaaattag acaaattgat tacactttat gattcaaacg atatttctct agacggggaa
    11941 gcttcaaaag cattctctga agatattaaa aaacgttttg aagcttatgg ttggaaccac
    12001 attcttgtaa aagacggtaa cgacattgaa gcgattgata aagcgattga agaagctaaa
    12061 ggtcaagctg gtccaacaat cattgaagtg aaaacaatca ttggttacgg ttcacctaac
    12121 aaatctaata gtaacgcgtc acacggtgcg ccacttggtg aagaagaacg taacttaaca
    12181 ttcgaaagct ataaccttga tccatctaaa cattttcatg ttgaagatga agtttatgac
    12241 attttcaatt caacaatgat tcaacgtgcg gatgaaaatg aaaaagcatg gaaagaaaaa
    12301 gtggaacaat acgctgagaa ataccctgaa ttatacaaag agtttgaaga tgctatggca
    12361 ggtaaattac ctgaaggcta tgaaaatgaa cttcctaaat ttgaacttgg tcacaaaggg
    12421 gcttctcgtg cagactctgg tgatgtgatt caagcgttaa gtaaagccgt accaacatta
    12481 ttcggtggtt cagctgactt agcttcatca aataaatcaa atgttaaaaa cgaaactgac
    12541 ttctctgctg aaaatggcgt tggtaaaaac gtatggttcg gtgtacgtga attcgcaatg
    12601 gcagcagctg ttaacggtat ggctgcacac ggcggtttac acccatatgg tgcgacattc
    12661 ttcgtattca gtgactattt aaaaccagca ttacgtttag cagccattat gggcttacgt
    12721 tcaacattcg tattcacaca tgactcaatt gctgtaggcg aagatggtcc gactcacgaa
    12781 ccaatcgaac aattggctgg tttaagagcg atccctaact taaacgttat tcgtccagct
    12841 gatggtaacg aaacacgtgt tgcatggaaa gtcgctgttg aatcaaacgg cacaccaact
    12901 gcattagtat taactcgtca aggtttacct gtattagatg tggaagaatc tacagttgaa
    12961 gaaggcgtaa gaaaaggtgc ttacgttgta ttcgaaactg aaaaatctcc agaatacgtt
    13021 ttattagcat ctggttcaga agtgagctta acagtagacg ttgctaaagc acttgaagaa
    13081 caaggtaaag gtgtacgtgt catttcaatg ccaaactgga acgcatttga aaatcaatca
    13141 aaagcatacc aagatgaaat tttattacca catgttgaaa aacgtgcagc tgttgaaatg
    13201 gcagcttcat taggttggca taaatacgtt ggtatgaacg gtgttgttgt aggtatcgac
    13261 cgttacggtg caagtgcgcc tggcgactta gttgttgaga aatacggctt cactaaagat
    13321 aatgttttag cagaaattga aaaattataa tttcctctaa aatagtgtca aatatagcgt
    13381 cgagctcgat cagtcgattt tgagctcggc ttttcttttt agatttggta taaatttgtc
    13441 ttccatatct tgaaaagcat acataatttt agtaaaatgc aaaaggataa agaaagtggg
    13501 tgaaactatg gctacatggt tagcaatttt attaattgtt attgcactta ttggtggatt
    13561 agttgggggc tttttcttag cacgtaaata tatgatggat tatttaaaga aaaacccacc
    13621 aatcaatgaa gaaatgttac gcatgatgat gatgcagatg ggacaaaaac catctcaaaa
    13681 gaaaattaat caaatgatga caatgatgaa caaaaacatg gataaaaaaa tgtaatgttc
    13741 tttaacgtta acgatagcaa ggatttgtgc tggaattaaa aaatcgcgca tccttgctat
    13801 ttttttgaag gcaagcgaga caacaagttt ttggtttcaa cagttcaacg atacttttta
    13861 atatggaaaa atattgaata tatccatttt ccattcaaaa cgacaagtat agaccattac
    13921 tcatttgagt tgtcatatga tatacttatt ggtatctttg gatgatgtta ggaggagcag
    13981 cgttgacata tttagttcta tccatactca ttgcgtttgt aatgggtgca ggtgtcattg
    14041 tcattagaat gaaggcgcaa aaatatccag taaatacaaa gaaaattatt ttgcctcctt
    14101 tctttatggc tacgggtgca ctgatgtatg tcgtccctta ttttagatta actggttttg
    14161 aaatcattga atccgtcgtg ttaggggttg ttttttcaag tgtacttatt atgacctcgc
    14221 attttgaagt caaaggtagc caaatttatt taaaaaaatc taaagcattc ccatttgtgc
    14281 tggtcacgtt attactgttt cgtacagtgc tgaaagtctt cttaggtaat tctgtagacc
    14341 ctggggaatt agcggggatg ttcttcttgc tcgcgtttag tatgcttgta ccttggcgac
    14401 ttgcaatgct ttatcgatat aaaaaaatca aagaccaaat tgtcgcataa tgagtatgtt
    14461 attgaccttt gcagtgagcg tgctgcgagg tcttttttct atagttgaaa gcaagtgcaa
    14521 aatgttaata aatagcgtcg gcaatcactt gaaatgagcc atagcatgct ataaaatgaa
    14581 atcgaacatt tgttctgagg tgatggaatt gaaattaata catacggccg attggcattt
    14641 aggcaaagtt ttaaacggtc attcgttttt ggaagatcag caatacgtat taaaacaatt
    14701 gattgaagtg cttgaacgtg aacaaccgga tgcactcatt attgcaggag acatttatga
    14761 tacggcttat ccgagtaaat atgtgattca actgatggaa gaaacgattg caaaaatcaa
    14821 tttagagata caaatcccgg ttgtgatgat taatggcaat cacgatggta aagaacgttt
    14881 gcgctatggt gcctcttggt ttcgacataa tcagctttat attactacgg aaattgagca
    14941 attttttgaa ccagtgattt tggggaatgt ggccatttat acgctaccat tttttacttt
    15001 atctgaagca cgtgagtatt tagaagtgtc tgtagaaaat tacgaagagg ctgtgaaaaa
    15061 attagtcgat caagtaagac cacagttaaa tcctgcaatg acgaacattt tagtggggca
    15121 ttttacgctt acaggtgcgc caaaaagtga ttcggaacgt gatattacga taggtactat
    15181 tgaagcagta tcgccacaat ttttggtaga ttttgatgcg gtcatgcttg gacatattca
    15241 tcatcctttt gcgagtcagt atcgaaacgt tgtgtatagt ggttcactgt tgcaatattc
    15301 attttccgaa gtgcaacaag ttaagggagt gcgcttattt catattgaag ccgatcaagc
    15361 gatacgccaa agttttatcc cattaaagcc agcccgtgaa ttagaagttg ttgaagcaag
    15421 ttttgatgat attatgaatg gtcgttttaa gcgtaaaagt gatgacaatt attttcattt
    15481 taatgttgaa caattaacgc acgtcaaaga ccctatgcaa aagttgaaac aaatttatcc
    15541 gaatacactg tcgttaacgc aacaaacaca accgtcatct tatcagtcta aagtattggc
    15601 agatgttaaa aagttatccc cattagatat cgtgggtcaa ttttactctg aaatgacgac
    15661 cgatacgctt tcagagacgc aaaaaagtaa tgtcatccag ttgttagaaa cgatgaatga
    15721 ggaggaataa tcatgaaacc attaaagttg caccttcaaa atttcggccc atttttagat
    15781 gaaacgattg atttttcccg tattcaatct aatcaactgt ttctgattag tggtaagaca
    15841 ggttcaggta aaacgatgat ttttgatggg attgtgtatg cattgtatgg tcgtgcatcg
    15901 acagaaaaaa gagaagtgaa acatttaaga agtcattttg cagccgctac caaaccttta
    15961 accgtcacgt ttgaatttga aatttctggt agattatata aagtcgttcg tgaagcatcg
    16021 tttttaaaac caggtaataa aaatgaaacg aaaccgaagc ttgaagtgta tcgtcataag
    16081 gcagggcgct ttgaacttat agagagtaca attcaagcag gggaacgctt cattttagaa
    16141 cttctaaaac tcaaacaaga tcagtttaga cagttgttcg tattgcctca aggggagttt
    16201 aaagagtttt tagtctcaaa tagttcagat aagcaaacta ttttaaggac gctttttaat
    16261 acgcaattat atgatatgtt gaaaaatcga ctcactgata aaacgaaaag catgaaaaat
    16321 gaaatcgatc aaatctatac caaaatacaa agtgcttggg atgaattgta tacactagac
    16381 catcctgatt tagtagtgga aaaaggactc aaaagtgaac aatatgattt gatgatggct
    16441 gcattacctc aatttgaaac gattgcagaa caacaagttt caaaagtgca agaagaaaaa
    16501 tcaaaggttg aaaaagaact aaatagtgtg aatgaagcag tagaacgtca aattttacgc
    16561 caacaattat ctgaacaaca gatacaattg aagatgaaac ttgagcaatt tgaagtacgc
    16621 caactgcaca ttcagcaact tgaacagcaa ttaaagttaa tgaatgaaag taaaatggcg
    16681 ctgaaaatgt atcaaaatct tcaagaatta gaagtggcat taaaacgaca acaaaatgag
    16741 tatgaacaac tgcagaatga aaacgaaaat ttagaaatag aacaaattga acagcaacaa
    16801 gcgcttgaaa cgcatttatt acaagaagat gagatgaacc aaaaagcaca gtatcttgag
    16861 cgcacacgtc atttttatca agagtgtaag caattgaaag aaaaatatac acgtatgaca
    16921 aacattgagc aaacgataca aaagttaatg caggataatg aagaagcaat gcaaacactt
    16981 gaagcgattg acaaggacga tttagaacgc caacctgatt atgaaaaaaa atcacaatta
    17041 caaactgaac aggcagtgtt agtagaaaaa gttgcgacat tacgcatcgc acaaaatcat
    17101 gcaacacttc aagcgcgaca acaacaacag cttcaacaat acactgagga tttaaagcga
    17161 atcgatgcgg agattgctca aaagcaggcg aatattcaag tcatctcaga aaatgaacaa
    17221 cagttgttga accatgaaca agctgttatg acattgcgcg cgacattaag tcaaaatgtt
    17281 ccatgtccag tatgtggtca aacggtgcat catgttgaag cggatgctga tatagaacaa
    17341 attaaaaaga ttcaacaaga aaatcgtatt attgagcaca cacttgaaaa gcttaaagaa
    17401 caaaagatta aatgtgatgc aaatattgcg cacactaaag cacaacttgc tgaaatcggt
    17461 gaagttgatt ttaatgaaga agatctcaag aaggcagaag cggaacaaca cgacataaaa
    17521 caaaagctag aggccatcga taaagaaaat tcacgcattg caacgattca agaagaagtt
    17581 ggtcgtattc atcaagtgat agacgaaaat caacagcaaa tacaattgtt aaagaacgaa
    17641 caagaataca ttcaagagcg tatggacaga tttgttgctg aaacggcata cgacgatatt
    17701 gagacattcc aatcagcctt tacccaattg aaatcagctg tcgatcagtt ttatcaagaa
    17761 aaagcaacat taaccgaacg acgtgatcaa cttacaacaa agataaaaga gcaacaatat
    17821 gagatacaat tgtgtgtaca tcaaatcatt gaacgttcaa aacaagtgca aactttaaat
    17881 gtcgacattg atgaagcatt ggaagcatta aacattcaga atcgtgaaac attacttgat
    17941 attttacaag acagtgttta taaagaagca tatgaacaag aagtgaaaac gtatcatcaa
    18001 gaaaaacaaa tagtagaact taaaatgcaa gatgtgtctc agcaactgtc cgcaattacc
    18061 gttgaagatt tagatgattt aaaagtaaaa caacaacaac aacgtgcaga ttttgaagat
    18121 gtacaaagac gttttaatga atatgcattt caagcgacag aaaatcaaaa aacagcacaa
    18181 aaaattaatg atgaagtgac ttatttaaaa aatactctca acgaacaaat tgaattattt
    18241 caacttgctg aaattttgag tggcaaaaat gcacataacc taacgttaga aaattacgtt
    18301 ttaatgcatt atttagaaca gattttgttg aaagcgaatc aacgcctcct cagtatgacc
    18361 ggacagcgtt atgaattagt gagaaatgag aaaaaaggaa gagggtttag tggtcttgag
    18421 attgaggtgt ttgattacta ttctaaccaa tcgcgtcaca ttacatcatt gtccggtggt
    18481 gaaacgttcc aagcctcact tgcattggcg ttaggattaa gtgaagtcgt tcaaagtgaa
    18541 caaggtggca ttgcgttaga tgcgatgttt atagatgaag gatttgggac acttgatcaa
    18601 gaaacgttag aaacagccct cgatacttta attcaattgc aatcgagtgg tcgattagtc
    18661 ggtatcattt cgcacgtttc agaactaaaa aatcgcattc cgattatttt agaagttgta
    18721 tctaaaaact accaaagtac aacgcattta agaagcaatg aataatcatg atgcatgttt
    18781 ttgagatgta accggtttga tcctgtatcg aaatcgagaa aacggtgatg aataagctga
    18841 tgacatatat tcctccgtac gcacgtgaaa ctgccaccaa tgcttttcta ttcaaaggtg
    18901 ttggtgacag ttttctttga taatattcgt ggcataggat atataaaaaa gaagctgaga
    18961 aaattgaatt tcacagcctc actatattac cgattattta ctgtctttac gtaataaatc
    19021 acgaatttca gttaataata caatattttc ttctacgaca acttcttctt cttttggttt
    19081 tacaaccgta tttgcgattt taacaaaaat gaataatgca aatgcaataa taatgaagtc
    19141 gatgatagat tgaatgaaaa taccatattt gataccatac attgaccagt ttttcgcaaa
    19201 gtcaacttcg ccaaataata aaccgattaa tggcatgatg atgttttcaa ctaacgatgt
    19261 aacgatttta ttaaaggcgg cccccatgac aacggcgatt gctaagtcaa gcacgttacc
    19321 ttttaacgca aagtttttaa attcttgcag catgtccaat tcacctctaa ttacaaaatt
    19381 tttgaataac aaaaacgatt atacacgaaa gcacaattat tgcaatacaa aattttctta
    19441 aaaatccata catttcttag tacattgatt atatgataat gttttgttat ggtatatatg
    19501 tcgattgcac ttttaattta attattgagt ttttttgatt attagtgtgt gatacttaaa
    19561 atttaatatg aggaaaggga gtatgttatt ttatgaattc ttcaactcca gaaccaaatg
    19621 gtaagaagtt ttctcctgta ttcttagtta gtgcgattat cgtttttgcg attgtactga
    19681 ttggtgtatt catcccaaca caatttggtg aatttacgaa tacgattaaa ctttggatta
    19741 cagataaact gggttggtat tatcttattt taactacgat tatcgtattc ttctgtatct
    19801 ttctaatttt tagcccaatc ggaaagttaa agttgggacg tccaaacgac aagccggaat
    19861 ttaatacagt ttcttggttt gcgatgttgt ttagtgcagg tatggggatt ggtttagtct
    19921 tctacggggc agctgaacct atttctcact ttgcgtctcc tcctaatgca gatccacaat
    19981 ctacggaagc atttaccgaa tcattacgat cgacattctt tcattggggt tttcatgcat
    20041 gggcagttta tggcgtagtt gcgttagcgt tagcatatgc acaatttaga aaaggagaac
    20101 cgggattact ctctaaaacg ttgcgcccaa ttttgggaga tcatgtcgat ggccttatcg
    20161 gaacaattat cgacgtgttg gcagtgtttg caacagtgat aggtgttgcg gtttcacttg
    20221 gtatgggggc attacaaatc tcaggtggtt taaattactt atttggttta cctaatacaa
    20281 ttgtgacgca atctatcatt attgttgttg taactatctt atttattatg agtgcatggt
    20341 caggattaag taaagggatt caatatttaa gtaatttaaa cattggactt ggtacattgt
    20401 tattaattac gggactaatt gttggaccga cagtgttaat tttaaatatg tttacaagtt
    20461 caacaggtag tctattaaat tcattcttat tcaacagttt tgatgcagca gctacgaacc
    20521 cacaaaagcg tgaatggatg tctgactgga cgctttatta ttggggttgg tggttaagtt
    20581 ggagcccatt cgttggtgtt ttcatcgcac gtgtatcaaa aggacgttcg attcgagaat
    20641 ttatttcggg cgtattactt gtacctgtta tcgtgagctt tatttggttt agtgtatttg
    20701 gtgtattagg aattgagaca gctaagaaac ataaagagat ttttgatatg tcagcagaaa
    20761 cacaattgtt tggtgtattc aaccatatcc cgctcggcat tgttttatca ataatcgcat
    20821 tattacttat tgcgtcattc tttattacat cagcagattc ggcgacattc gtattaggta
    20881 tgcaaactac gaatggttcg cttaatccaa gtgcattcat taaagtgact tgggggatcg
    20941 cacaatcatt aatcgcgttt gtcttgttac tttcaggtgg cggtgacgga gaagcaggtt
    21001 taaacgcctt gcaaagtgct gcgattatta gtgcgttacc gttttccttt attgtgattc
    21061 tgatgatgat tagtttctat aaagatgcca ataaagagcg taaattctta ggccttactt
    21121 taacaccgaa taagcatcgt ttgaaagaat acgtcgcaaa ttcacaacaa gattatgaag
    21181 acgaattgat ttcaaaacgt aaaggcttac gtgaacaaga aaaataaata tgaaatttta
    21241 cggttggtga ttacatatca tcagccgttt tttacgttat cgctcatata gtgtcaatat
    21301 cttatacgga tatgtctccc ccaatcaaaa atgttattga aaat
//
LOCUS       DANHPA010000036        21248 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.036, whole genome shotgun sequence.
ACCESSION   DANHPA010000036 DANHPA010000000
VERSION     DANHPA010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 21248)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21248)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21248
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.036"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            63..2591
                     /gene="secA"
                     /locus_tag="PTC28_001085"
     CDS             63..2591
                     /gene="secA"
                     /locus_tag="PTC28_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HDK5716381.1"
                     /translation="MGLITKMIDGNKREVKRLSKLADKVIALEEDIALLTDEEMRAKT
                     KAFQEEVQQIEDIKKQNNKLDDILPEAFALVREASKRVFNMTPYKVQIMGGIAIHKGD
                     IAEMRTGEGKTLTATMPTYLNALTGRGVHVITVNEYLSSVQSEEMAELYNFLGLSVGL
                     NLNSLSTVEKREAYSKDITYSTNNELGFDYLRDNMVNYKEDRVMRPLHFAIIDEVDSI
                     LIDEARTPLIISGEAEKSTSLYTQANVFSKMLKAEEDYNYDVQTKSIQLTEQGIDKAE
                     RMFKIENLYDVKHVDVIHHINLALRAHYTMQRDVDYMVTGGEILIVDQFTGRTMPGRR
                     FSEGLHQAIEAKENVQIQNESKTMASITFQNYFRMYNKLAGMTGTAKTEEEEFRNIYN
                     MTVTQIPTNRPVQRVDRSDLIYVSQKGKFDAVVEEVIEKHRKGQPVLLGTVAVETSEY
                     ISNLLKKRGIRHSVLNAKNHEREAEIVSGAGQRGAVTIATNMAGRGTDIKLGEGVEEL
                     GGLAVIGTERHESRRIDDQLRGRSGRQGDKGDSRFYLSLQDDLMVRFGSERMQAMMSR
                     LGMDDSTPIESKMVSRAVESAQKRVEGNNFDARKRILEYDEVLRKQREIMYEERNQII
                     DQDHSTDLVMQMMHSTLDRALLHYVNEDEEKMDYEPLIHYVQDIFLHEGDLTESEING
                     KDREDMFEVIWAKIEAAYNRQKDQLGDRMPEFERMILLRSIDNHWTSHIDTMDQLRQG
                     IHLRSYGQQNPLRDYQNEGHQLFDIMMQSIEEDVSKYILKSVITVEEDVEREKTKELE
                     GKHVSAEDGKEKVKPQPIVKEHEVGRNETCPCGSGKKYKNCHGK"
     gene            2631..3735
                     /gene="prfB"
                     /locus_tag="PTC28_001086"
     CDS             join(2631..2702,2704..3735)
                     /gene="prfB"
                     /locus_tag="PTC28_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010959142.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HDK5716382.1"
                     /translation="MELSELKRNLDSYSAKLEQLRGSLDLENKETNIQEYEEMMADPQ
                     FWDNQERAQTIIDKNNAIKSVVNNYYEVAETLEEMVATYELLQEEYDDEMKDDLEQEV
                     IGFQTKVDQFELQLLLDGEHDANNAILELHPGAGGTESQDWTNMLLRMYQRYCEQQGF
                     KVEIVDYQAGDEAGVKSVTMLVKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS
                     CDVIPEFNNEKIEVEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQN
                     ERSQIKNREAAMKMLKAKLYQLELEQKEQELAAIRGEQKDIGWGSQIRSYVFHPYSMV
                     KDHRTNEETGNVNAVMDGEIGPFIEAYLRHQMQ"
     gene            3943..4584
                     /locus_tag="PTC28_001087"
     CDS             3943..4584
                     /locus_tag="PTC28_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HDK5716383.1"
                     /translation="MGIHQYFKRLSDLEKLIRLPGKFKYFEHNVAAHSFKVTKIAQYL
                     GTVEEHHGKTVDWKSLYEKALNHDFAEVFTGDIKTPVKYASGELKKLFSQVEEEMVDT
                     FIKEEIPEQYQDIYRRRLQEGKDDSLEGQILSVADKIDLLYETFGEIQKRNPEPLFFE
                     IYEMSLETIMQFDHLASVQDFIENIIPEMLTERFIPRTELKEMTMQILNKRKM"
     gene            4590..4835
                     /locus_tag="PTC28_001088"
     CDS             4590..4835
                     /locus_tag="PTC28_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbA family protein"
                     /protein_id="HDK5716384.1"
                     /translation="MIWYLLAAFFPCVLVVIFSAITRSKWMGTLITLVVIGASVYKGF
                     FHNEWIIFLDVVSLLAGYIIVEELKIHHIEHDKEGGM"
     gene            5005..6987
                     /gene="uvrB"
                     /locus_tag="PTC28_001089"
     CDS             5005..6987
                     /gene="uvrB"
                     /locus_tag="PTC28_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002508272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HDK5716385.1"
                     /translation="MEHHDFKIASNFEPQGDQPQAIKALVKGIEEGKRHQTLLGATGT
                     GKTFTMSNVIKEVGKPTLIIAHNKTLAGQLYSEFKTFFPENRVEYFVSYYDYYQPEAY
                     VPSTDTFIEKDASINDEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPDEYRDLVV
                     SIRVGMEMDRSELLRKLVDVQYTRNDIDFRRGTFRVRGDVVEIFPASREELCIRVEFF
                     GDEVDRISEINYLTGEVLKEREHFALFPASHFVTREEKMKIAIERIEKELEEQLAYLR
                     SENKLLEAQRLEQRTNYDLEMMREMGFTSGIENYSVHLTLRPLGSTPYTLLDYFGDDW
                     LIMIDESHVTLPQIRGMYNGDQARKQVLVEHGFRLPSALDNRPLKFEEFEQKAKQLVY
                     VSATPGPYEIEHTDEMIEQIIRPTGLLDPKIEVRPTKNQIDDLLSEIQERTEQGERVL
                     ITTLTKKMSEDLTTYLKEAGVKVNYLHSEIKTLERIEIIRDLRMGTFDVLIGINLLRE
                     GLDIPEVSLVVILDADKEGFLRSERSLIQTMGRAARNDKGHVIMYADRITDSMKVAID
                     ETERRREIQIAYNEKHGIVPKTINKEIHDVISATVETDETNEDQRKEVPKKMTKKERE
                     KTIENVEKEMKEAAKALDFERATELRDLLFELKSKG"
     gene            6993..9836
                     /gene="uvrA"
                     /locus_tag="PTC28_001090"
     CDS             6993..9836
                     /gene="uvrA"
                     /locus_tag="PTC28_001090"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HDK5716386.1"
                     /translation="MEEPSIVVKGARAHNLKNVDIELPKNQLIVMTGLSGSGKSSLAF
                     DTIYAEGQRRYVESLSAYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVAT
                     VTEIYDYIRLLYARIGKPFCPNHGIEIESQTVQQMVDRIMELEERTKIQLLAPVVNHR
                     KGTHEKLLTDISKKGYVRVRVDGEIMDVTQVPELDKNKNHTIEIVVDRLVVKPGIETR
                     LADSIETVLELADGRLVVDIIDGDKLEFSEKHACPICGFSIGELEPRMFSFNSPFGAC
                     PTCDGLGQKLTVDLDLVVPDKDKTLNEGAILPWEPTSSDFYPSMLKRVCEVYKINMDK
                     PFKKLTERQRNIILYGSGDKEIEFTFKSKFGQERKRTMPFEGVVPNIERRYHESPSEY
                     VREMMQKYMGEQVCETCHGQRLSREALSVYVADKNVGEVVEQSIKEALTYYENIELTE
                     QDAQIAHLILKEITSRLAFLNNVGLDYLTLNRSSGTLSGGEAQRIRLATQIGSRLSGV
                     LYVLDEPSIGLHQRDNDRLIHTLQEMRDLGNTLIVVEHDEDTMIAADYLVDIGPGAGE
                     HGGEVVASGTPKQVMRNAKSLTGQYLSGKKFIPVPEHRRPVTDRKISVKGARSNNLKN
                     VDVDFPLSVMNVVTGVSGSGKSSLVNEVLYKSLAKAINKSKIKPGEHDEITGMDQIDK
                     IIDIDQSPIGRTPRSNPATYTGVFDDIRDVFASTNEAKVRGYQKGRFSFNVKGGRCEA
                     CKGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKGKNIADVLEMTVEDATQFF
                     ENIPKIKRKLQTLVDVGLGYITLGQPATTLSGGEAQRVKLASELHKRATGRSIYILDE
                     PTTGLHVDDISRLLKVLNRLVENGDTVVIIEHNLDVIKTADNLIDLGPEGGDGGGTIL
                     ATGTPEEIAAIPESYTGRYLKTVLARDKERMEG"
     gene            9840..10190
                     /locus_tag="PTC28_001091"
     CDS             9840..10190
                     /locus_tag="PTC28_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716387.1"
                     /translation="MEEAKVKVLELLKDGKISVEEATTLLDAMTTEEKVTHATTTNKS
                     DRTEKTTRDFEETVEGFVNNTLDSVASLLKHGQKLINVNRDKVKEMSESERQAALKKV
                     EETLNEVREKMKKD"
     gene            10700..11641
                     /locus_tag="PTC28_001092"
     CDS             10700..11641
                     /locus_tag="PTC28_001092"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011303626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphorylase"
                     /protein_id="HDK5716388.1"
                     /translation="MLTTQDLVKRFNLNVVAGEAGLNRPIRNTDISRPGLEMAGYFSH
                     YASNRIQLLGTTELSFYNLLPDAERKGRMRKLCRPETPAIIITRGHDAPDELLEAAEE
                     LDTPLIYVEEATTRVMGRLTTYLEHELANSTSLHGVLVDVYGVGVLITGDSGIGKSET
                     ALELVKRGHRLVADDNVEIKEITKDQLIGKAPKIIEHLLEIRGLGIINVMTLFGAGSI
                     LTQKRIRLNINLETWHQDKLYDRVGLNHETLKILDTEITKKTIPVRPGRNVAVIIEVA
                     AMNYRLNIMGINTAEEFNERLNAEILKNSQQNKGDIE"
     gene            11641..12477
                     /locus_tag="PTC28_001093"
     CDS             11641..12477
                     /locus_tag="PTC28_001093"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HDK5716389.1"
                     /translation="MIGYIDPVAFSLGGLEVKWYGIIIASAILIGYWIAQKSAQSVGF
                     HEDDLVNILLVCVFVAIISARLYFVLFQLDYYIQNPIEIPMIWHGGIAIHGGLIGAFA
                     MGTYYCYRKNWHPFQLGDVVAPSIILAQGIGRWGNFMNHEAHGGPVSRSFLESLHLPQ
                     FIIENMQINGIYYQPTFLYESIWDVIGFIILITIRRHLKIGETFFIYIIWYSVGRFYI
                     EGLRTDSLMLTETIRIAQAVSIVCIIIGVIFIVWRRLKKDVPLYREVNVLNWPFDKKG
                     KR"
     gene            12479..12964
                     /locus_tag="PTC28_001094"
     CDS             12479..12964
                     /locus_tag="PTC28_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HDK5716390.1"
                     /translation="MKRRLKVYPAGCHNALHDLYRYIRFMRLLKNTLIIEIARYVPHV
                     GVKRWMYCRLLKMTIGEKTAFAFKAVPDLLYPEKIKIGHNVIIGYNTTLLTHEFLTES
                     LRVGEVEIGDHTMIGANVTVLPGVKIGSHVQIGAGSVVSKDIPDYTVAYGNPIQLHSK
                     H"
     gene            12984..14423
                     /locus_tag="PTC28_001095"
     CDS             12984..14423
                     /locus_tag="PTC28_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDK5716391.1"
                     /translation="MTQKRNIIQFSDDVALYERLAKQKIQQQDYVKAQRYLEKVLALS
                     PDCFEAKQQLATCFIKLNAPGRAEAIYYEEISKGNELEASYYELSQLNIDLNEPNKAY
                     LFGLSYAFLADDEAYREELEDLFEVAFNGEHPLEEESQLFVVQVIFQYLFGQGRLVEA
                     REYLLRQDEEIQDNRIIRNLLAMCYLYLNENKIAQEMFERLLKEDPSDVHALCHYTLL
                     LYNMNQQTRFQNYVKILNKIRPMNDEESFKLGIVLSYLKQYPASQQLLVPLHRKGKFQ
                     TFQLFHALSFNYYYLGNIEQSHHFWQVLTQFSKANRGFPPWVIEESAHYFNQHVEPLL
                     LSDDQHERLYGLFLLNQLNGKEILMTKEVWTILESMGDYEKLYLSYLIQNLQLRKLHF
                     IHQGMEILYRLPETQSYASLFLSWISYAESLLVEQVDQEQVEAYVAAVAYLFFNQKED
                     HDMTRPQIIEHFDVATDAFEQALQHLLSI"
     gene            14486..15418
                     /gene="trxB"
                     /locus_tag="PTC28_001096"
     CDS             14486..15418
                     /gene="trxB"
                     /locus_tag="PTC28_001096"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019469483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HDK5716392.1"
                     /translation="MSEQVRYDVAIIGAGPAGMTAAVYASRANLNTVMIERGMPGGQM
                     ANTEEVENFPGFEMISGPDLSSKMFDHAKKFGAEYKYGDIKGIEDKGDYKVIDFGSST
                     LEATAVIIATGAEYKKVGVPGEEQLGGRGVSYCAVCDGAFFKNKNIYVIGGGDSAVEE
                     GTFLTKFASKVTIVHRRDQLRAQKILQDRAFKNDKIDFIWNHTLKSVNEKDGKVGSLT
                     LVSTVDGTEQTVEADGLFVYVGMKPLTQPFENLGITNEAGYIVANDDMSTAIKGIFVA
                     GDVREKGLRQIVTATSDGSIAAQSAQEYIESLHD"
     gene            16024..16932
                     /gene="rapZ"
                     /locus_tag="PTC28_001097"
     CDS             16024..16932
                     /gene="rapZ"
                     /locus_tag="PTC28_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HDK5716393.1"
                     /translation="MQHEENNEIVKSELLVVTGLSGAGKSLVIQSLEDLGYFCVDNLP
                     PILLPKFVELMEQGNPSMQKVAVGIDLRGREFFQYLVREIDAVQSRKDVIVDVLFVDA
                     DTENLISRYKETRRKHPLQEHTELPLVKAINEERKLLSEIRSLANYTLDTTTLSPKAL
                     RKRVYEYFNKENKSTFTINVSSFGFKHGIQIDSDLVFDVRFLPNPYYVPELRPLTGMD
                     EDVYKYVMKWKETNTFYEKLLDLLLFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAQR
                     LAEELKQIYDYNVYVHHRDAHIESGE"
     gene            16934..17929
                     /locus_tag="PTC28_001098"
     CDS             16934..17929
                     /locus_tag="PTC28_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016424532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YvcK family protein"
                     /protein_id="HDK5716394.1"
                     /translation="MKQLKLVLIGGGTGLSVLARGLKTFPIDITAIVTVADDGGSTGK
                     IRDEMDIPAPGDVRNVLAALSDVEPTLEQLFQYRFKEDQISGHSLGNLLIAALTNITH
                     DFGHAVKELSKILNIKGRVIPSTISSVSLNAEMEDGEIVTGESNIPRKQKKIKRVFLE
                     PADVQPMDEAIEALREADLIVLGPGSLYTSVISNLCVKGIANAIVESDAKKLYVSNIM
                     TQPGETDHYTVMDHIDAIHQQLGNHVLDFVIANQLEFSPQIIEKYESKGAKPVYYDKD
                     ELNQLGVQLVTGQHLVEVSEHDYVRHRTEVLAEMIYEIALQEISTIQFDPDQFKS"
     gene            17976..18920
                     /gene="whiA"
                     /locus_tag="PTC28_001099"
     CDS             17976..18920
                     /gene="whiA"
                     /locus_tag="PTC28_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein WhiA"
                     /protein_id="HDK5716395.1"
                     /translation="MSFASEMKNELTRIEVDHANAKAELSALIRMNGALSLSNQQFVI
                     NIQTENATTARRIYSLIKFVFKVEVEILVRKKMKLKKNNIYICRIKMKTKEILDELGI
                     LKNGMFSHDIDPEMVKDDEMRRSYLRGAFLAGGSVNNPETSSYHLEIFSLYEGHSTGL
                     TQLMNTYELNAKSLERKKGWITYLKEAERIAEFLSLIGGYQALLKFEDVRIVRDMRNS
                     VNRLVNCETANLNKTVSAAMKQVESIQLIDQEIGIDNLPDRLREVARLRIEHQDVSLK
                     ELGEMVSTGTISKSGINHRLRKLNEMADKIRSGEPFEV"
     gene            complement(19905..20942)
                     /locus_tag="PTC28_001100"
     CDS             complement(19905..20942)
                     /locus_tag="PTC28_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015977992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDK5716396.1"
                     /translation="MKTRCYDGKKWQYEFKHEGKRYRKKGFRTKREANSAGLDKLNEL
                     RQGFNFENNLTFEDYFKNWIETYKENIVSENTFRHYRFTLKHIQHHKIGKVEISKINK
                     QMYQKFINDFSENRAKETIRKTNGAIKSALEDAVYDGLIAKNPTYKITFKAGKTTKSE
                     EEKYISLEEYKALKEYLKDKSSKSALALYIMICTGCRVSGVRSMKLEYINEFRSELYI
                     DEHKTDSSPRYVAVGKNDLRHIINVIKNSTISYDGYIFKDAGKLISINAINKTLKKAC
                     ESLGIKYITSHALRHTHCSYLLAKDISIYYISKRLGHKNISITTSIYSHLLEEKFSEE
                     EQKTKNILDAM"
BASE COUNT         7083 a         3423 c         4602 g         6140 t
ORIGIN      
        1 cgaaaaatga tatgatggat agttgtaagc ggcacagttt tatggctaaa ggagcgaaca
       61 aaatgggttt gataactaaa atgattgacg gtaataaacg agaagtcaaa cgtttaagta
      121 agttagcaga caaagtcatc gcattagaag aagatattgc gttgctaact gatgaagaaa
      181 tgagagcaaa gacgaaagct tttcaagaag aagttcaaca aatagaagac attaaaaaac
      241 agaataataa attagatgat attttaccgg aagccttcgc acttgtacgt gaagcttcta
      301 aacgtgtgtt caatatgaca ccatataaag tacaaatcat gggtgggatc gccattcata
      361 aaggtgatat tgcagagatg agaactggtg aaggtaaaac attaactgca acgatgccaa
      421 cctatttaaa tgcattaact ggtcgcggtg tgcacgttat tacggtaaac gaatatttat
      481 ctagcgttca aagtgaggaa atggcagaac tgtacaattt tttaggtctg tcagtcggat
      541 tgaatctcaa tagtttaagt acagtagaaa aacgtgaagc ttacagtaaa gacatcacat
      601 acagtacaaa taatgaactt ggctttgact atttacgtga caacatggtg aattataaag
      661 aagaccgtgt tatgcgacca ttacattttg cgattattga tgaggtcgac tcgattttaa
      721 tcgatgaagc ccgtacgccg ttaattattt caggtgaagc ggagaaatct acatctttat
      781 atacacaagc gaatgtgttt tcaaaaatgc ttaaagctga agaagattat aactatgatg
      841 tacaaacgaa aagtattcaa ttgacggaac aaggtatcga caaggcagaa cgtatgttta
      901 aaattgaaaa cttatatgat gtgaaacatg tagatgtgat tcaccacatt aaccttgctt
      961 tacgtgcgca ttatacaatg cagcgtgacg tagattatat ggtaacgggt ggcgaaattc
     1021 tgatcgttga ccaatttaca ggtcgtacaa tgccaggacg tcgtttctca gaaggcttac
     1081 accaagcgat tgaagcgaaa gaaaatgtcc aaatccaaaa cgaatctaag acgatggcgt
     1141 cgattacatt ccaaaactat ttcagaatgt acaacaagtt agcaggtatg acaggtacgg
     1201 ctaaaacaga ggaagaagaa ttccgtaaca tatacaatat gactgtaact cagattccaa
     1261 cgaaccgacc tgtccaacgt gtcgaccgtt cagatttaat ttatgtgagt caaaaaggta
     1321 aatttgatgc ggttgtcgaa gaagtgattg aaaaacatcg taaaggtcag cctgttttat
     1381 taggtactgt tgcagtagaa acatcggagt atatctcgaa tttattgaaa aaacgcggta
     1441 ttcgtcatag tgttcttaat gcgaaaaatc atgaaagaga agcggaaatt gtttccggtg
     1501 caggtcaaag aggcgctgta acgattgcga caaacatggc cggacgtggg acagacatta
     1561 aactaggcga aggtgttgaa gagctaggtg gtctagccgt aattggtacg gaacgtcatg
     1621 aatcacgccg tattgatgat cagttgcgtg gtcgttcagg tcgtcaaggt gataaagggg
     1681 acagtcgatt ctatttatca ttacaagatg atttgatggt gcgcttcggt tcagaacgta
     1741 tgcaagcgat gatgagtcgt ctagggatgg atgattctac gccgattgaa tctaaaatgg
     1801 tgtcacgtgc tgtagagtct gcacaaaaac gtgtagaagg taacaacttt gatgcgcgta
     1861 aacgtatttt ggaatatgat gaagttttac gtaaacaacg tgaaatcatg tatgaagaac
     1921 gtaatcaaat tattgaccaa gatcatagta cggacctagt gatgcaaatg atgcattcca
     1981 cattagatcg cgcattgcta cattacgtga atgaagatga agaaaagatg gattacgaac
     2041 cactgattca ctatgttcaa gatatctttt tacatgaagg tgacttaaca gaaagtgaaa
     2101 ttaatggcaa agatagagaa gatatgtttg aagtcatttg ggcgaaaatt gaagctgcat
     2161 ataatcgtca aaaagatcaa cttggcgacc gtatgccgga gtttgaacgt atgatattat
     2221 tgcgttcaat cgacaatcat tggacatcac atattgatac aatggaccaa ctccgtcaag
     2281 ggatccattt acgttcgtat ggtcaacaaa atccattgcg tgactatcaa aatgaaggac
     2341 atcaattgtt cgatataatg atgcaaagta ttgaagaaga tgtcagcaaa tatatcctga
     2401 aatctgtcat cacggtagaa gaagatgttg aacgtgagaa aacgaaagag ttagaaggta
     2461 aacacgtttc agctgaagat ggcaaggaaa aagttaaacc acagcctatt gtaaaagagc
     2521 atgaggtcgg acgtaatgaa acatgtccat gtggaagcgg caaaaaatat aaaaattgcc
     2581 acggtaaata gcggtggcaa tagttgaata tttaaaagga gcgatacatg atggaattgt
     2641 ccgaacttaa acgcaatctg gatagttata gtgcaaaatt agaacaactt agggggtctc
     2701 tttgacctag aaaacaaaga gacgaacatc caagaatatg aagagatgat ggcggaccca
     2761 caattttggg ataatcaaga gcgtgcgcaa acgattatag ataaaaacaa tgcgataaag
     2821 tctgttgtaa acaattacta tgaagttgct gaaacgcttg aagagatggt tgcgacgtat
     2881 gaattgctac aagaagaata cgatgacgaa atgaaagatg atttagaaca agaagtcatt
     2941 ggatttcaaa cgaaagtaga ccaattcgaa ttgcaactct tgctagatgg cgagcatgat
     3001 gcaaacaatg ctattctcga gttacatcct ggtgcaggtg gcacagaatc tcaagactgg
     3061 acaaatatgt tgttacggat gtatcaacgt tattgtgaac agcaaggttt caaagtggaa
     3121 attgtcgatt atcaagcggg cgatgaagcg ggtgtgaaga gtgttacaat gctcgtcaaa
     3181 ggacacaatg cttatggcta tctaaaagca gaaaaaggcg tgcaccgtct cgtccgtatt
     3241 tcgccgtttg attcttcggg tcgtcgccat acgtcatttg cgtcatgcga tgtcattcct
     3301 gaatttaaca atgaaaaaat cgaagttgaa atcaattcag acgatattac tgtggatact
     3361 ttccgtgctt caggtgcagg ggggcagcat attaacaaaa ctgaatcagc catccgtatt
     3421 acgcaccatc cgacaggtat cgtagtgaat aaccaaaatg aacgttcgca aattaaaaac
     3481 cgagaagcag ctatgaaaat gttgaaagca aaactttatc aactcgagtt agaacaaaaa
     3541 gagcaagaac ttgctgccat tcgtggtgaa caaaaagata ttgggtgggg cagtcaaatt
     3601 cgttcttacg ttttccatcc ttattctatg gtgaaagatc atcgcacaaa tgaggagacg
     3661 ggtaacgtca acgcagtcat ggacggtgag attggtccgt ttatcgaagc gtatttaaga
     3721 catcaaatgc aataagatga agtgtatatc caactagggg ctagggcatt caattgttca
     3781 agcccctgaa ttatatgggt gatgaagacg tttgatgttt ggtacgagca cgtgcaagta
     3841 ttttttcaaa agttggagaa acaagtgata taaataatat aaatatgtta atataatcaa
     3901 caaatggaca tcaaatgtaa atatgacagg aggaggttga ttatgggaat tcatcaatat
     3961 tttaaaaggt tatcagactt agaaaagctc attcgattac ctgggaaatt taaatacttc
     4021 gagcataatg tagccgcaca ctcttttaaa gttacaaaaa ttgctcagta tttaggtaca
     4081 gttgaagagc atcacggtaa gacagtggat tggaaaagtt tatacgaaaa agcgctcaac
     4141 cacgactttg ccgaagtgtt tacaggagat attaaaacgc ctgtgaagta tgcgagtggt
     4201 gaattgaaaa aactgttttc acaagtagaa gaggaaatgg ttgatacatt cattaaagaa
     4261 gaaattccgg aacagtatca agatatttac cgacgtcgtt tgcaagaagg caaagatgac
     4321 tcgttagaag gacaaattct atcagtcgca gataagattg atttattgta tgaaacattt
     4381 ggtgaaattc aaaaacgtaa tcctgaacct ctattttttg aaatatatga gatgagtctt
     4441 gaaacgatta tgcaatttga tcatctggct tccgtacagg attttattga aaatattatt
     4501 ccagaaatgt taactgaaag atttatacca cgcactgaat taaaagaaat gacgatgcaa
     4561 atcctaaata aaagaaagat gtgatagggt tgatttggta tctactggcc gctttttttc
     4621 cttgtgtcct tgtggttatt ttcagcgcga taacgagaag taaatggatg gggacgctca
     4681 ttacattagt tgtaatcggt gcatcagttt ataaaggttt ttttcataat gaatggatta
     4741 ttttccttga cgttgtatca ttgttagcag ggtatattat tgtagaagaa ctaaaaattc
     4801 atcatatcga acatgataaa gagggcggca tgtaatcgtt gtgcatacgc cttcacaatt
     4861 atagcgacat caggagtgaa tctgacacag tttgaaggta atcagaagca ctcctctttg
     4921 tgttggatta cgaacaaatg tttgtatttt atcattgtgt tctgttaaaa tatgagtatt
     4981 aagtagatag gaggcggaca gtgaatggag catcacgact ttaaaattgc ttcaaatttc
     5041 gaaccacaag gggatcaacc ccaagctatc aaagcactgg taaaaggaat agaagaaggt
     5101 aaacgtcacc aaacattact cggtgcaaca ggtacgggta aaacatttac gatgagcaat
     5161 gtcattaaag aagtgggcaa accgacgctg attattgccc acaacaaaac gttagcgggg
     5221 caattgtaca gtgagttcaa aaccttcttc cctgaaaata gagtggaata ttttgttagt
     5281 tactacgact attaccaacc agaagcgtat gttccgtcta ccgatacgtt tattgaaaaa
     5341 gatgcgtcaa ttaacgatga aatagaccaa ctccgacatt cagcaacgag tgcgctgttt
     5401 gaacgagatg atgtcattat tatcgccagt gtaagttgta tttacggttt aggtaatcca
     5461 gatgaatacc gtgacttagt tgtaagcatt cgtgtaggga tggaaatgga tagaagtgag
     5521 ttattgcgaa agcttgttga cgtacaatat acacgaaacg acattgactt tagacgcgga
     5581 acatttagag tacgcggcga tgtcgttgag attttcccag cttcacgtga agagttatgt
     5641 attcgtgtgg aattttttgg tgatgaagta gaccgtatta gtgaaattaa ctatttaaca
     5701 ggcgaagtat taaaagaacg tgaacatttt gcacttttcc cagcttctca cttcgtaacc
     5761 cgtgaagaaa aaatgaagat tgcaattgag cgtattgaaa aagaattaga agaacaacta
     5821 gcatatttaa gaagtgaaaa taaattactc gaggcgcaac gtttagaaca acgaacaaat
     5881 tatgatttag agatgatgcg cgaaatgggc tttacatcag ggattgagaa ctattcggtt
     5941 catcttacat tgcgaccact cggttctaca ccgtacactt tgttagatta ttttggtgat
     6001 gattggctta ttatgattga tgagtcgcat gtgacgttac ctcaaattcg tggaatgtac
     6061 aatggagacc aagcacgaaa acaagtgtta gttgagcatg gtttccgtct tccaagtgca
     6121 ttagacaata gaccattgaa gtttgaagag ttcgaacaaa aagcgaaaca actcgtttat
     6181 gtatcggcga caccaggtcc atatgaaatc gaacatacag atgaaatgat tgaacaaatt
     6241 attcgaccaa ctggcttgtt agatccaaaa atcgaagtcc gccctacgaa aaatcagatc
     6301 gatgacttgc tcagtgaaat tcaagaacga acagaacaag gcgaacgtgt actgatcaca
     6361 acgttaacga aaaaaatgag tgaggattta acgacttatt taaaagaagc cggtgtaaag
     6421 gtcaattatt tgcactctga aattaaaaca ttagaacgga ttgaaatcat tagagattta
     6481 cgtatgggaa catttgatgt gctcatcggt attaacctgc ttagagaggg acttgatatt
     6541 ccagaagtct cattagtggt gattttggat gcggataaag aaggtttctt acgttctgag
     6601 cgttcgttaa tccaaacgat gggccgtgca gcgcgtaatg ataaagggca tgtcatcatg
     6661 tatgcagatc gaataacgga ttccatgaaa gtcgcgattg atgaaacgga acgacgtcgt
     6721 gaaattcaaa tcgcatacaa tgaaaaacat ggcattgtac cgaaaacaat taataaagag
     6781 attcatgatg tcattagtgc aacggtcgaa acggatgaaa caaatgaaga tcaacgtaaa
     6841 gaagtaccga agaaaatgac gaaaaaagaa cgtgaaaaaa cgattgaaaa tgttgaaaaa
     6901 gaaatgaaag aagcagcaaa agcattagat ttcgaaagag caaccgaatt aagagattta
     6961 ttatttgaat taaaatcaaa agggtgaaat gcatggaaga accatcaatc gtagtgaaag
     7021 gggcccgtgc ccacaattta aaaaatgttg atatcgaatt gccaaaaaat cagttaattg
     7081 tcatgacagg actgtcagga tcggggaagt cctcgctcgc atttgatacg atttatgctg
     7141 aagggcaacg tcgatatgtg gagtctttaa gcgcatatgc tcgtcagttt ttagggcaaa
     7201 tggataaacc agacgtagat acaattgaag gtttatctcc agcgatatcg attgatcaaa
     7261 agacaacgag taaaaaccca cgttcaacgg tggcgactgt aacagaaatt tacgattata
     7321 ttcgtctcct ttatgcgcgt atcggaaagc ctttttgtcc caatcatggt atcgaaatcg
     7381 aatcacaaac cgtacaacaa atggttgatc gtattatgga attggaagaa cgtacgaaaa
     7441 tccaactatt agcacctgtt gtgaaccatc gtaaagggac gcatgaaaaa ttattaacgg
     7501 acattagtaa aaaaggttat gtacgtgtgc gtgttgacgg tgaaattatg gacgtgacac
     7561 aagtaccgga acttgataaa aataaaaacc acacgattga aatcgtcgtg gaccgtttag
     7621 tcgtgaaacc gggtattgaa acacgtttag cagattccat cgagaccgta cttgaattag
     7681 cagacggtcg actcgtcgtg gacattattg atggagataa gctagagttt tcagaaaagc
     7741 atgcatgtcc aatttgtggt ttttcaatcg gtgaattaga gccgagaatg ttcagtttta
     7801 atagtccgtt tggcgcgtgt ccaacgtgtg atggtttagg acaaaagcta actgtagact
     7861 tggatttagt cgttccggat aaagataaaa cgctgaatga aggcgccatt ttaccgtggg
     7921 agccgacaag ttcggacttt tatccatcga tgttaaaacg tgtatgtgaa gtatacaaaa
     7981 tcaatatgga caaaccattt aaaaaattaa ctgaacgcca aagaaacatc attttatacg
     8041 gttctgggga caaagaaatt gagtttacat tcaagtcgaa attcggtcaa gagcgtaaac
     8101 gtacgatgcc gtttgaaggg gtggtcccga atattgagcg ccgttaccac gaatcacctt
     8161 cagaatacgt acgtgaaatg atgcaaaaat atatgggtga acaagtgtgt gagacgtgtc
     8221 atggccaacg attgagtcgc gaagcattgt cggtgtacgt ggcagataaa aatgtcggcg
     8281 aagtggtgga acaatccatt aaagaagctt tgacatatta cgaaaatatt gagctaactg
     8341 aacaagacgc acaaattgct catttaattt taaaagagat tacgtcgcgg ttagcttttt
     8401 taaataacgt tggactcgat tatttaacgc tgaaccgttc atctggcaca ttgtcaggtg
     8461 gggaagcgca acgtattcga ctcgcaacac aaatcggttc tcgtttgtca ggtgtcttgt
     8521 acgtgctaga tgagccatct attggtttac atcaacgtga caacgatcgt ttgattcata
     8581 cattacaaga aatgcgtgat cttggaaaca cattaattgt ggttgaacac gatgaagaca
     8641 cgatgattgc ggcagactac cttgttgata ttggcccagg tgcaggtgag cacggcggtg
     8701 aagtcgttgc gagcggtacg ccgaaacaag tgatgcgtaa cgccaaatca ctcactggtc
     8761 aatatttaag tggtaaaaag ttcattcccg ttccggaaca tcgtcgtcca gtgactgacc
     8821 gtaaaatttc agtcaaaggt gcgcgcagta ataacctcaa aaatgtcgac gttgattttc
     8881 cgctctctgt catgaatgtt gtgacaggtg tatcaggttc aggaaaaagt tcgctcgtga
     8941 atgaagtgtt gtacaaatca ttggctaaag cgattaataa atcaaaaatc aaacctggtg
     9001 aacatgacga aattacaggt atggatcaaa tcgataaaat tattgatatc gatcagtcgc
     9061 ctattggaag aacaccgcgt tctaatccag ccacatatac aggcgtattt gatgatattc
     9121 gagacgtctt tgcctcaacg aacgaagcaa aagtacgtgg ttatcaaaaa gggcgtttta
     9181 gttttaacgt taaaggtggc cgttgtgaag catgtaaagg tgatggtatt ataaaaatag
     9241 agatgcattt tctgcctgat gtgtatgtgc cttgtgaagt atgtcatggc aaacgttaca
     9301 atcgtgagac gttggaagtc acttataaag gaaaaaatat tgctgacgtg ttagagatga
     9361 ctgtagaaga cgcaactcaa ttttttgaaa acattcctaa aatcaaacgc aaattacaaa
     9421 ctttagtcga tgttggatta ggttatatta cgcttgggca acctgcaacg acactttcag
     9481 gtggagaagc gcaacgtgtt aaacttgcct cagaattaca caaacgagca acaggacgct
     9541 caatctatat tctcgatgaa ccgacaacag gcttacatgt cgatgatatt agtcgattgt
     9601 taaaagtgct caatcgactt gttgaaaatg gtgataccgt tgtaatcatc gaacataatt
     9661 tagatgtcat taaaacagca gataacttaa ttgatttagg ccctgaaggt ggtgacggtg
     9721 gcggtacgat tcttgcgaca gggacacctg aagaaattgc cgctatccca gaatcttata
     9781 cgggtcgtta tcttaaaact gtattagcgc gtgataagga acgaatggag ggctaagcca
     9841 tggaagaagc taaagtcaaa gtattggaat tactgaaaga tggcaaaatt tctgtagaag
     9901 aagcaacgac attattggac gcgatgacaa cggaagaaaa agtaacacat gctacaacga
     9961 caaataaaag tgatcgtact gaaaagacga cgcgtgattt tgaagagacg gtagagggtt
    10021 ttgtgaataa cacattggat agtgtagcga gtttgttaaa gcatggtcaa aagcttatta
    10081 atgtgaatcg tgataaagtg aaagaaatga gtgaaagtga acgtcaagcg gctttgaaaa
    10141 aagtggagga gacgttgaat gaagtgagag agaaaatgaa gaaagattaa taggtgagga
    10201 agtgtactgt gaatggtatg cttccttttg ttttgccaca tatgtttcac atagactagg
    10261 ttgtcatcat acatagattg tcacaccgtg ctgcacgttc ttacggtttc acaatgaaag
    10321 ctgtgtggtt aatactacat cgcattgatt caacctgaaa acgtgaataa cattttaggt
    10381 tcgctgcctc aaagtaatcc attttttcaa actaaagttg cgtatctctc atgcgttttt
    10441 aatggtatac tttgaattct aaagggtact gcaaaaaaga tgggatatgt gttaagatat
    10501 agcgatgctc atacggatac actgaacttt tgataatgga aatgcacaac aaagctagca
    10561 cgtttttcgt gattttgcat acgtgttgaa atgtgtttca attgtggaga ttcatgtata
    10621 atgaaacaag taatgcgtag tcaaaagtga ttaaaaataa agtttgattt aaagtaaaca
    10681 gtaaaactga ggtgattaga tgttaacgac gcaagattta gttaagcgat ttaatttgaa
    10741 tgtggtcgct ggtgaagcgg ggttaaatcg tccaatacgt aatacagata tttcaaggcc
    10801 cggtttggaa atggcagggt atttttctca ctacgcttcc aatcgtattc aacttttggg
    10861 tacaacggaa ctgtctttct acaatttatt accagatgct gaacgtaaag gacgtatgcg
    10921 taaactttgc cgtcctgaaa caccagccat tattattaca cgagggcatg atgcgccgga
    10981 tgagttgtta gaggcggcag aggagttaga tacgccgttg atttatgtcg aagaagcaac
    11041 gacacgtgtc atggggcgtt tgacgacgta tctcgaacat gaacttgcta attctacatc
    11101 gttacatggt gtcctcgtcg atgtgtatgg tgtcggtgta ttaattacag gtgattccgg
    11161 tataggtaaa agtgaaacag ctttggaact tgtgaaacgt ggtcatcgtc ttgttgcgga
    11221 tgataacgta gaaatcaaag agattacgaa agatcaactc attggtaagg cgcctaaaat
    11281 cattgaacat ttgctagaaa ttagaggatt gggcattatt aacgtgatga cattgtttgg
    11341 tgcgggttcg attttaacgc aaaaacgcat tcgcttaaac atcaatctgg aaacttggca
    11401 tcaagataaa ttgtatgacc gtgtcggttt aaatcatgaa acacttaaga ttttagatac
    11461 cgaaattacg aaaaaaacga ttcctgttcg tccagggcga aatgtagctg tcatcattga
    11521 agtggcggcc atgaattacc gcttgaatat tatgggaatt aatacagcag aagagtttaa
    11581 tgaacgttta aatgctgaaa tcttaaaaaa cagtcaacaa aataaaggag acatagaata
    11641 atgataggat atattgatcc agtcgctttt tccttgggcg gcttagaagt gaaatggtac
    11701 ggtattatca tagcgagcgc gattttaatt gggtattgga ttgcacaaaa aagtgcacag
    11761 tcagtcggtt tccacgaaga tgatcttgtc aatattttat tagtttgtgt atttgttgcg
    11821 attattagtg cgcgtttata tttcgtgctt ttccaactgg attattatat tcaaaatccg
    11881 atagaaattc cgatgatatg gcatggcggt attgcaatac acgggggtct catcggtgcg
    11941 tttgcgatgg gtacttacta ttgttatcgc aaaaactggc atccgtttca attaggtgat
    12001 gtggtggcac caagcattat tttagcgcaa ggtattggac gttggggtaa ctttatgaac
    12061 cacgaagcgc acggcggtcc agtgagccgt tcatttttag agtcgttaca cttaccacaa
    12121 tttattattg aaaatatgca aatcaacggc atttattacc aaccgacatt tttatatgaa
    12181 tcgatttggg atgttatcgg ttttattatt ttaatcacta tccgtcgtca tttgaaaatc
    12241 ggcgaaacat ttttcatcta tatcatttgg tattcggtcg gtcgttttta catagaaggc
    12301 ttacgtacag acagtttgat gttaacggag acgattcgaa ttgcacaagc ggtctcaatt
    12361 gtatgcatta tcatcggcgt tatctttatt gtatggcgtc gacttaaaaa agatgtcccg
    12421 ctctatcgcg aagtgaacgt gctcaattgg ccgttcgaca agaaaggaaa acgttaagtt
    12481 gaagcgacga cttaaagttt atccagcggg ctgtcataat gcattacatg atctgtatcg
    12541 ttatatccgc tttatgcgac ttcttaaaaa tacgctcatt attgaaatag ccagatatgt
    12601 ccctcatgta ggtgtgaaac gatggatgta ctgccgttta ttaaaaatga cgataggtga
    12661 aaaaactgca tttgctttta aagcggtgcc tgatttatta tatccagaaa aaataaaaat
    12721 tggtcataac gtcatcattg gttataatac gactttatta acccatgaat ttttaactga
    12781 atcgttaaga gtcggtgaag ttgaaatcgg ggaccatacg atgattggtg cgaatgtgac
    12841 cgtattacca ggtgtgaaaa tcggcagcca cgttcaaatt ggtgcgggga gtgtcgtttc
    12901 taaagatatt cccgattata ctgtggcgta tggcaatccg atacaactgc actcaaaaca
    12961 ttagaaaaga gaggtgacaa tggatgacac aaaaacgaaa tattatacag ttcagcgatg
    13021 atgtggcact ttatgaacgt ctagcaaaac aaaaaataca acaacaagat tatgtaaaag
    13081 cacaacgcta tttagaaaaa gtgttagcgt tgtcaccaga ttgttttgag gcgaaacagc
    13141 aacttgcgac atgttttatc aagttaaatg cgccaggacg tgctgaagca atttattatg
    13201 aagaaattag taaggggaat gaattggaag cttcttacta tgaattaagt cagttgaata
    13261 ttgatttaaa tgagccaaac aaagcgtatt tattcggttt aagttatgct tttttagctg
    13321 atgacgaagc ctatcgagaa gagttggaag acttatttga agtggcattc aacggcgaac
    13381 atccgcttga agaagaaagt cagttgtttg tcgtacaagt catttttcaa tatttattcg
    13441 gtcaaggccg tttggtagaa gcgcgtgagt atttgttgag acaggacgaa gaaattcaag
    13501 ataatcgaat catccgtaat ttgctcgcga tgtgttatct ttatttaaat gaaaacaaaa
    13561 tcgctcaaga gatgtttgag cgtttgttga aagaggaccc ttccgatgtg catgcgttat
    13621 gtcattacac tttgttactc tacaacatga atcaacaaac acgcttccaa aattatgtga
    13681 aaatattaaa caaaatccga ccgatgaatg atgaagagtc ttttaagctt gggattgtgc
    13741 tcagttattt aaagcagtat ccagcctctc aacagttgtt agtgccactt caccgcaaag
    13801 gcaagtttca gacctttcaa ctgtttcatg cgctttcatt caattattat tacctaggaa
    13861 atatcgagca aagccatcac ttttggcaag tgttaactca attttcgaaa gcgaatcgtg
    13921 gttttccacc atgggtcatt gaggaaagtg cccattattt taatcaacat gtggagcctt
    13981 tgttgctaag tgatgatcaa catgaacgtt tgtacggtct ctttttgtta aatcaactca
    14041 acggtaaaga aattttgatg acgaaagaag tttggacgat tttagaatca atgggagatt
    14101 atgaaaaatt gtatctctct tatctcattc aaaatctgca actgagaaaa ctacacttta
    14161 ttcatcaagg tatggagata ctttatcgcc tcccagaaac acaatcttat gcctctctct
    14221 ttttaagttg gattagttat gcagaaagtc tattagtcga gcaagtcgac caggaacaag
    14281 tggaagcgta tgtggctgcg gtcgcttatc tctttttcaa tcaaaaagaa gaccatgata
    14341 tgacgcgacc acaaattatt gaacattttg atgtggcaac cgatgctttt gaacaagcac
    14401 ttcagcatct gttgagcatt taaatttgag tccatgaatt aaatgttgta aaatgcgtat
    14461 gatgaaatta aaggaggaac agatcatgtc agaacaagta agatatgatg ttgcgattat
    14521 tggtgcagga ccagcaggca tgacagctgc tgtttatgct tcacgtgcga atttaaatac
    14581 agtaatgatt gaacgtggta tgccaggtgg acaaatggca aacactgaag aagtagaaaa
    14641 ctttccaggt ttcgaaatga tttcaggacc tgatctttca agtaagatgt ttgatcatgc
    14701 taaaaaattc ggcgctgagt acaaatatgg cgatattaaa ggcatcgaag ataaaggcga
    14761 ttacaaagtc attgattttg gttctagtac acttgaggcg acagctgtga ttattgcgac
    14821 aggtgcggaa tacaaaaaag tgggcgtacc cggagaagaa cagctcggag gtcgcggtgt
    14881 cagctactgt gctgtatgtg atggtgcttt ctttaaaaac aaaaatatct atgtcatcgg
    14941 tggtggcgat tcagcagtag aagaaggtac gttcttaact aaattcgcta gcaaagtaac
    15001 aatcgtacac cgtcgtgacc aattaagagc acaaaaaatt ctccaagacc gtgcttttaa
    15061 aaacgataaa attgatttta tttggaatca cacacttaaa tctgtcaatg aaaaagacgg
    15121 taaggtcggt tcattaacac ttgtttcaac ggtggatggc actgaacaaa cagtagaagc
    15181 agatggatta tttgtatatg taggtatgaa gcctcttaca caaccatttg aaaacttagg
    15241 tatcacaaac gaagcaggtt atattgtggc aaacgatgat atgagtactg ccattaaagg
    15301 tattttcgta gcaggagacg ttcgtgaaaa aggcttacgt caaattgtga cagcaacaag
    15361 tgacggtagt attgccgctc aaagtgcaca agaatatatc gaaagcttac atgactaatt
    15421 tttaaacaca tgacattgaa tcaacaggag ctgggacccc gtttccagtt ctttttttat
    15481 agcatttaaa ggagtgtctg tgatattgaa ttattcttga aaattttatt gattgaattt
    15541 catcgcgtat gcatgaacca caattagaaa taggataagt ggtcaatgtt catgtgataa
    15601 cgcaatgatt tcaaaaacat aggcgttacg agattcactt cctctctctt ctaataatca
    15661 tgaatatatg aattgtttct aagtagaggt taaattggac aaaaaaatga cgctattgtt
    15721 ttttgatttc ataatcttgc tctcagtttt tctatatttg atgtaagatt gcctagaaga
    15781 ctaagatgcc taagggataa agttgaaagc aagccgagtt gagttgtaga gccagcctct
    15841 aggaaaagag aagtcacgat ggcactcaaa aaccacaaac ccaaaccaaa ggaggagggc
    15901 aagttaaaca aatgctttat ccatcagtag catcaaaatt ttgatgtcct atatccatcc
    15961 ctctataact ttagactgtt ttcatgtaaa ctaatagaga atatgattgg atggtggtta
    16021 ataatgcaac atgaagaaaa taatgaaatc gtaaaaagtg aactccttgt tgtcacaggc
    16081 ctatctggtg cagggaaatc attagtcatt caaagtttag aagacttagg ctatttctgt
    16141 gtcgacaact taccgccgat tttacttccg aaatttgtag agttaatgga acaaggtaat
    16201 ccgtcgatgc aaaaagttgc ggtagggatt gacttgagag gacgcgaatt tttccaatat
    16261 ttagtacgtg aaattgatgc agtacaaagt cgcaaagatg ttattgtcga tgtgctattc
    16321 gttgatgcag atactgaaaa tctcatttca cgctataaag aaacacgtcg taaacatcct
    16381 ctacaagaac ataccgagtt accgctcgtc aaagccatca atgaagaacg taaattacta
    16441 tcagaaatca gaagtttggc gaattacact ttagatacaa caacgttatc acctaaagcc
    16501 ttgagaaaac gtgtttatga atattttaac aaagaaaata aatcaacatt tacaatcaat
    16561 gtttctagtt ttggtttcaa gcatggcatt caaatcgatt cagatttagt atttgatgtc
    16621 cgctttttac cgaacccata ctatgtgcct gaattgcgac cgctcacagg tatggatgaa
    16681 gatgtttata aatatgtgat gaagtggaaa gaaacgaata cattttatga aaaactatta
    16741 gatttattgt tatttatgat tcccggttat aaaaaagaag gcaaatcgca actcgttatc
    16801 gcaattgggt gtacgggtgg tcagcatcgc tcagtcgcac tagcacaacg tttagctgaa
    16861 gaactaaagc aaatttatga ttataatgtg tatgttcatc atcgtgatgc gcatatagaa
    16921 agtggcgagt aaaatgaaac aacttaaatt agtactgatt ggtggaggta ctggtttatc
    16981 cgttttggca agaggattaa aaacttttcc gatagatatt acagcaattg tgacagtagc
    17041 agatgacggt ggcagcacgg ggaaaatcag agatgagatg gatattccgg cgccaggaga
    17101 tgtacgtaac gtattggctg ctttaagtga tgtagaaccg acacttgagc aactgtttca
    17161 atatcgattt aaagaagatc aaattagcgg tcactcattg gggaacttgc tgattgcggc
    17221 tttaacgaat attactcatg atttcggtca tgctgtgaaa gaattaagta aaattttaaa
    17281 tattaaaggc cgcgttatac cgtcgacgat ttcgagtgtc tctttgaacg cggagatgga
    17341 agatggtgaa attgtcacag gggagtctaa tattccaaga aaacaaaaga agattaagcg
    17401 tgtgtttcta gagcctgcag atgtccaacc aatggacgaa gcaattgaag cattgcgtga
    17461 agcggatttg attgtgttag gtccgggttc tttgtatacg agtgtgattt caaacttgtg
    17521 cgtcaaaggc attgctaatg cgatagtcga aagtgacgcg aaaaaattat atgtttctaa
    17581 cattatgacg caaccgggtg aaacagatca ttacacagtc atggatcata tcgatgccat
    17641 tcatcaacaa ctcggtaatc atgtgcttga ttttgtgatt gcgaatcaac tagaattttc
    17701 acctcagatt attgaaaaat atgaatcaaa gggcgcaaag cctgtgtatt atgataagga
    17761 tgaattgaat caactcggtg tacagctcgt gacaggacag catcttgtag aagtttcaga
    17821 acatgattat gtgcgccatc gtacagaagt tttggcagaa atgatttatg aaattgcctt
    17881 acaagaaatt agtacgattc agtttgaccc agatcaattc aaatcctaat tgtagccatt
    17941 ttgaaccata gtaaatagaa agggaaagat tcattatgag ctttgcatct gaaatgaaaa
    18001 atgaactgac acgaattgaa gttgaccatg cgaacgctaa ggcagaacta agcgcactga
    18061 ttcgaatgaa cggggctttg agtctgtcta accaacaatt tgtgattaat atccaaacgg
    18121 aaaatgcaac gacggcgcga cgtatttatt cactgattaa atttgtgttt aaagttgaag
    18181 ttgaaatatt agtacgcaaa aaaatgaagt tgaagaaaaa caatatttat atttgtcgaa
    18241 taaaaatgaa gacgaaggaa attttagatg aacttgggat tttgaaaaac ggcatgttca
    18301 gccatgatat cgatcctgaa atggtaaaag atgacgaaat gagacggagt tatttacgtg
    18361 gcgcattttt agcaggtggc tccgtgaaca atccagaaac gtcttcatat catttagaaa
    18421 ttttctcgct ctatgaaggt cattcaactg gtttgacaca attgatgaat acgtatgaat
    18481 taaatgcaaa aagtttagaa cgtaaaaagg gatggattac atatctcaaa gaagctgagc
    18541 gaattgctga atttttaagt ttgattggtg gctatcaagc gttactaaag tttgaagatg
    18601 tgagaattgt ccgagatatg cggaattcag ttaatcgtct cgttaattgt gagacggcaa
    18661 atttaaataa gacagtcagt gcggctatga aacaagtgga aagtattcaa ttgattgatc
    18721 aagaaatcgg cattgataac ttgccagatc gattaagaga agttgcgaga ttgcgtattg
    18781 agcaccaaga tgtctcgcta aaagaattag gtgaaatggt gagcactggt accatttcta
    18841 aatcaggcat taatcatcgt ttgagaaaac tgaatgaaat ggctgataaa attagaagtg
    18901 gagaaccatt tgaagtgtaa atataatcct gttgataaca agcatcttag acctctaaaa
    18961 aggtttaaag atgcttattt taatgcagaa attgatgtat tgttgaatga gtgaatttag
    19021 atagaccatc agaagaagat gaattagggg gattcgttag agtgatggag aaagaagtca
    19081 tctttgtttt tgataagtat aaaataaaac gtagatgtca aatcatgaat atgtatatgc
    19141 tatacgttga agcttaagtt atcatcgcaa cactgctatc aacaaatcaa aaatttaaag
    19201 atgtgtttat gaatataggg gatgtaagaa cagagaagca aatctgtgta tatgacacaa
    19261 gttgcatagt gtataataaa gcaagaattg ttgagtaaga gggattttct atgtttgata
    19321 tcaataaaat taaaaagttg ctaaagaaat gggtgttgaa gttaatcctt cagatgcaaa
    19381 gacaaaaaac ggtatttaaa gaccattgta agcgtacgca ccggcaaata gaataagctt
    19441 cctagctaga gtatctcagt aaggaaaatc gctcatgaac ttgccagtag agggaatatc
    19501 cgtattaatg taaacgagtt atacgataat ggtttatcgt gttatcatag taaggacata
    19561 aatttacaat gcttttgagc gacttttgta gtactaattc tcatgaccgt attgatgtta
    19621 gtgcggttga gtgaatgtta attttaaggc tagatcgccg taaccattat caacaacgta
    19681 aaggttacag tgacgactga atcgggaata gatgaatgaa agtccttgaa atgttcgtca
    19741 tctagcgcgc tattgactag caaaacaaaa agaaccccgc cgttatggga ttcttaattt
    19801 taaaaagtgt gttattgaat ggtatgaacc ccctcgagag gaacttatat cccttgatat
    19861 aaccgtgatt ttaaggggga aagtccctaa cgggtcccta aaaattacat tgcatctaaa
    19921 atattcttcg ttttttgttc ttcttcgctg aacttttctt ctagcaaatg agaatatatt
    19981 gatgtagtga tagatatgtt tttatgccct aaccgttttg aaatgtaata aatcgaaatg
    20041 tctttcgcta ataaatacga acaatgtgta tgacgtaaag cgtgtgaggt aatatattta
    20101 atccctaaac tctcacatgc tttttttaaa gttttattaa ttgcgttgat actaatcagc
    20161 ttaccagcat ccttaaatat ataaccatca taactaatcg tagagttttt aataacattg
    20221 attatatgac gtaagtcatt tttcccaaca gcaacatatc gaggtgatga gtctgttttg
    20281 tgttcgtcta tatacaactc acttctgaat tcatttatat actctaattt cattgatcgc
    20341 acaccgctaa cacgacaacc agtacaaatc atgatgtaca atgctagagc agatttggat
    20401 gacttatctt ttaaatactc ttttaatgct ttatactctt ctaaagatat atatttttct
    20461 tcttctgatt ttgttgtttt accagctttg aatgttattt tataagttgg atttttagct
    20521 attaacccat catataccgc gtcttctaaa gctgatttaa tagccccgtt ggttttcctg
    20581 atagtttctt tagcgcgatt ttctgaaaag tcattaatga atttttgata catttgttta
    20641 tttattttag atatttcaac tttaccgatt ttatggtgtt gtatgtgttt taatgtgaaa
    20701 cgataatgtc gaaatgtatt ttctgaaaca atattttcct tatacgtttc aatccaattt
    20761 ttaaaataat cctcaaaagt caaattattt tcgaagttga aaccttgtct taattcgttt
    20821 aatttatcta aacccgctga atttgcttcc ctttttgtcc tgaatccttt cttgcggtac
    20881 cgtttcccct catgcttaaa ctcatattgc cactttttcc cgtcgtaaca tcgcgtcttc
    20941 attctatccc tcctcaaaaa aagtaaaaaa aataataagg gtacagtaag gtacccgatg
    21001 aatagcttat tgctagtaag aataaattta ttaattaatt gcactttgaa gtcgaacggc
    21061 atagtcttca ggtatatttg ataccatatg aaacatttca ataaaatggt tttcggtctc
    21121 ttgtaaatat agatcataga aacttctaaa ttcatgtaga aatttgtttt tatctttctg
    21181 taaaggcaat aagataatta taactattgt caatagaaag aaacttccat agtatttagg
    21241 gaatgatt
//
LOCUS       DANHPA010000037        21104 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.037, whole genome shotgun sequence.
ACCESSION   DANHPA010000037 DANHPA010000000
VERSION     DANHPA010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 21104)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21104)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21104
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.037"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            47..748
                     /locus_tag="PTC28_001101"
     CDS             47..748
                     /locus_tag="PTC28_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HDK5716397.1"
                     /translation="MNKETRQKKLLALIQQDKPMTALELAQALNVSKRTILRDMQELE
                     GKGVQIVAHAGMYGGYQLQANQHYYQLNLTQTELQALYLILKESQAQSTLPYEAATNH
                     LIQKILKQPYTHIRRTLRQLDQYVLYETRQQPRLPVQFSDILIYCQERKVMGIDYKSD
                     ANGEQRFENVIFIGLIARRDGWQAIVYHIGGDYTQYVDISTIEDISYSFQKSIQTNDI
                     TLENYETYLKDSKHQ"
     gene            complement(802..1533)
                     /locus_tag="PTC28_001102"
     CDS             complement(802..1533)
                     /locus_tag="PTC28_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HDK5716398.1"
                     /translation="MSKYKWKDIAWRDLLLVPIVIVATFVFGILVAIISFVFFNVSEA
                     ALLSDSNALVAQVIATVVAYLIVILSFYLLHYKTMGQRFMKGLQGIRQYIFWIVGAYL
                     VAQAASTLYGYLQQFLPERFQYDTTQNEMLIDQLFAIPWFTPINFMMIVILAPVVEEI
                     FFRHILIGELGKKLNFKVMAVISALLFAGVHVLQATSPFEMIDYLILAVPLVFLYIKS
                     GRNLGVSIAFHMLNNFISFVVTIIQ"
     gene            1677..2030
                     /locus_tag="PTC28_001103"
     CDS             1677..2030
                     /locus_tag="PTC28_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716399.1"
                     /translation="MNGYEMPNLIQALEVLNELLDLTTTYDLTYARDPEYAQDILTNL
                     KAKVQSHYLQSPQPVHTHAYSPYPYDLYYCCLYNLYHNPLVSINFGSQRKLNQSYIQQ
                     ITRTRAYFQMCTGTF"
     gene            complement(2226..3614)
                     /locus_tag="PTC28_001104"
     CDS             complement(2226..3614)
                     /locus_tag="PTC28_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDK5716400.1"
                     /translation="MEDNQLHRGLSSRQIQMIALGGTIGVGLFMGASSTIAWTGPSVI
                     FAYLVAGLFLFLIMRAMGEMVYLDPSTGSFANFATDYIHPVAGYVTAWANIFQWIVVG
                     MSEVIAVGAYMKFWFPELPTWIPGLIVIVLLTAANAVSVKAFGEFEFWFAMIKIVTII
                     LMIIAGFGLIFFGIGNGGNPIGLSNLTAHGGFMPNGWLGFFFALSIVIGSYQGVELIG
                     ITAGETKDPQKNIKKAVNGVIWRILIFYIGAIFVIVTIYPWNELHDIGSPFVATFAKI
                     GITIAAGLINFVVITAAMSGCNSGIFSSSRMIFTLAQHRQLPAIFTKVMRNGVPFYTV
                     LAVSIGILIGVILNVVLPQFIDGSENIFVYVYSASILPGMIPWFMILFSHIQFRKKFP
                     EKLENHPFKMPLAPVTNYLSIAFLLMVLVAMLINNETRVSVIIGFLFLGFMAVFFFLR
                     GYHKRDKEDFKL"
     gene            3981..4823
                     /locus_tag="PTC28_001105"
     CDS             3981..4823
                     /locus_tag="PTC28_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HDK5716401.1"
                     /translation="MKDTNIKWDTIFYGRQWVSNIIETIQKKDVLQSFYLRRYLLRAM
                     MAGFIISIITVFVLTVKTTFAPDVAPGLVNMAGAFTFSFALVLILFTNSELLTSNFMY
                     FTVGLYYHLIRPTRVIKIFTLCFVGNMIGAVILFSLLRFSNVMTPDMLQMLDHTVQVK
                     IHDYSFQNILVRAIFANFFINIALVIAMQIDDVLAKMFVMMFGVTIFAFMGYEHVVYN
                     ACLFIASAIYQTDAFNMLHMAKNIIGALLGNYIGGGLIIGLFYAYLNDHGQFKAIKKE
                     NKKN"
     gene            4911..5246
                     /locus_tag="PTC28_001106"
     CDS             4911..5246
                     /locus_tag="PTC28_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716402.1"
                     /translation="MDRTRIIRGVLISIILGLLFFFLNQTQSTYTTTELLLRSVLVAI
                     VFAVLYFVVFTILSHDTRRRIYGPPLLIGIILGILVGQWLEHAIVGLALGVAVGLIVG
                     AIRQRFFKE"
     gene            5253..5435
                     /locus_tag="PTC28_001107"
     CDS             5253..5435
                     /locus_tag="PTC28_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716403.1"
                     /translation="MSTQTIGIIVIVILLISFLPNAYMLYKTSKEGTENTRYKLMVGV
                     DAMLLVLIIAAILLLT"
     gene            complement(5650..5841)
                     /locus_tag="PTC28_001108"
     CDS             complement(5650..5841)
                     /locus_tag="PTC28_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716404.1"
                     /translation="MSLEMILFFIVAPLIILVGNLVLAPRFQKHIPMRVHLLSAATGL
                     IVYAVLASIIYYFFLQGKI"
     gene            complement(5838..6482)
                     /locus_tag="PTC28_001109"
     CDS             complement(5838..6482)
                     /locus_tag="PTC28_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDK5716405.1"
                     /translation="MYRAVIFDFDGTIIDTEQHLYETVNRYLNEAGHANMSADFYRSN
                     IGGRALGIHQHLLTHLGEMLTDQVYQEHYETAGQLPLRPGVLELMQQLHQRHIPMGIA
                     SSSTRHHIESLVQKLGIEKYISVIKGREDVETVKPAPDLYLAAVQALNYSPTHCLAIE
                     DSVNGATGAICAGLDVIVNSNQFTAQSDFSELDLLAKDVDLSQVVAQYFDGVQR"
     gene            complement(6528..7358)
                     /locus_tag="PTC28_001110"
     CDS             complement(6528..7358)
                     /locus_tag="PTC28_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDK5716406.1"
                     /translation="MNITGHHHISMYTKDLDQNKAFYTETLGLHLTKETVNQDDHGMV
                     HIFYGDQQNSPGTLLTFFEIPNAGAMRKGTNMIARIGLLVPNEAALDFFEARLQEKAT
                     NISRGTYMEQPALYFDDPDTLSYVMMVNGDAVIPNGWQNPVDNDIPAEYQILGLGPIE
                     IHVADAQKTLDYLRDTLDFKDKAQFGEQSVVAIDDQGYYSDLVIIEKDGPNVRPGRGY
                     VHHHALATENDDTLNQLVSLHDHLAGKHSGVIDRIWFKSLYYRQNKIMYEFATLAPGF
                     "
     gene            complement(7438..7716)
                     /locus_tag="PTC28_001111"
     CDS             complement(7438..7716)
                     /locus_tag="PTC28_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716407.1"
                     /translation="MMMKVLQNYFITVSILFMMLVLSVGFLMNFQNGLTLLLSLTAIL
                     TMINFTIETWLLRTTLSERKVRFIQTLVFPLSIIIIGVVCFILLPTVS"
     gene            complement(7895..8815)
                     /locus_tag="PTC28_001112"
     CDS             complement(7895..8815)
                     /locus_tag="PTC28_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HDK5716408.1"
                     /translation="MLQRLGRFASKTFLLWMLLASITGFLIPDIFKGFGTFVPYLLGI
                     VMLGMGLTVTVDDFKLILKEPKAVLIGIVLQYTIMPLSAYAVVKLFQLPADIAIGVLL
                     VGCCPGGTSSNVISYLAKGNVPLSVTITTISTILASFMTPFLMFVLAQEWMDVSFIAM
                     FISVVKVVLVPLVLGILIQRFLKPVAHVGEDILPIISVIAISVILGAVVAGSGELIIQ
                     TGLLIFLVVVIHNAIGYLLGFWFSHLFKLNYTDQKTVSIEVGMQNSGLAASLATVHFN
                     PLAAVPGAIFSVVHLVTGPILAKYWAAKSK"
     gene            9005..9532
                     /locus_tag="PTC28_001113"
     CDS             9005..9532
                     /locus_tag="PTC28_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716409.1"
                     /translation="MIIDKIETFILNIDQMTSRFARRKLLKLLNGMNLHATIQIEWLK
                     HQQNYLLKIHLPKQALPYLISFLSFHHYRIYQIVPFQLLDAIKPLHQRPHEEHRFEMM
                     IDGLDDPFIKDKVIDILNGFQSERIIYSFAKDILKVTTTAEVMSALVGTLATRNIDIY
                     HANTAARCFHKMRIS"
     gene            complement(9648..10151)
                     /locus_tag="PTC28_001114"
     CDS             complement(9648..10151)
                     /locus_tag="PTC28_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HDK5716410.1"
                     /translation="MKHMQNEWVEIELVRLMKTTPLNAYHAWLDPNQLIHWFMTSRRT
                     NQVIENDPVEGGHYQIVDLRKGKRIEVIGTYKTLKEGEQIVKTIQMPELSEHVDEIEV
                     YFEERSPGMTEMTFHYRGMLPKERRLTNLEYKQQKKAYHDHTAHGFELMFDVLQRELE
                     AEFELNE"
     gene            complement(10262..11563)
                     /locus_tag="PTC28_001115"
     CDS             complement(10262..11563)
                     /locus_tag="PTC28_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HDK5716411.1"
                     /translation="MLEQEHEHSSPWALIPLVVFISIFLGAGIITKDFTFMPLNVAAI
                     IGVVVALMMNRRETFMSKVEVFARQAGHANIVLMMFIFLLAGAFSKTTEAMGGVTSIV
                     NLGLSFIPQNFLIVGLFIICMFISISMGTSVGTVAAIAPVGFGISEATEIPAAFAMAT
                     VVGGAMFGDNLSMISDTTIAAVRTQKTQMSDKFKVNFRIVVPGAIVTIFVLWWLSHGY
                     DVTQTKTYDFEWVKVVPYLLVLILAVIGINVVLVLLGGILLSSLIGLIDGSFNLGGLL
                     KAASEGVLGMQDIAMIALLIGGMIGLVEHHGGITWLLNFVKQRVKTRRGAELGIASLV
                     SVADISTANNTISIIMAGPLAKDIAEEYDIDPRKSASLLDIFGSAFQGFVPYSPQLIA
                     AAGVASISPVTLLPYSIYPVMLAICGIIAILFNLPRLRSHR"
     gene            complement(11726..12862)
                     /locus_tag="PTC28_001116"
     CDS             complement(11726..12862)
                     /locus_tag="PTC28_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 peptidase aminoacylase family protein"
                     /protein_id="HDK5716412.1"
                     /translation="MAADLKQLIEWRRWFHQNPELSNEEFQTTARLREILESYDIRIL
                     DLPLKVGLIAEVGQGEEMIAIRSDIDALPINEKTNLAYQSQNDNVMHACGHDIHMASI
                     LGTAVKLKEMESELPGRVRIIFQSAEETGDGAPAVVQTGALDGALAILGFHNAPMIKV
                     GEWRAKSGHLTSNVDRFNIRIQGRGAHAAMPQDSVDPQIVLGQLILSLQTIVSRNIAP
                     YEEAVVTIGQIHSGHTWNVIPQEAMVEGTVRSFKADIRDQVEDRMTQICEGLEKQFNV
                     KIDLDYHRLTASVINDETLQNLALEVAQSVGYETEVLPRALTIGEDFSGYQAVAPVHF
                     AMIGSDSEYPLHHEQFQPNEQILDKVPDYFIAFIQRLWDEHLRR"
     gene            complement(12852..14048)
                     /locus_tag="PTC28_001117"
     CDS             complement(12852..14048)
                     /locus_tag="PTC28_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HDK5716413.1"
                     /translation="MEMHHTIQNYLTSWRGHTFQNITAGLLVALAMVPGAIAFSFIAG
                     VGPTVGIFSTALMLIGISFLGSRTLMVSSPSSGVAIVAVLITSMYGQQMLVAAMLIMG
                     IFQIIFAFCRVDKAIHKIPVPVVVGFMNALAYLLFTSQLKHILGHNLSTYLFAVLSLI
                     MIFFIPHITERIPAALIMIVVLSIAAKMFHVDLMVVQDLAYIQFEMPTLGLPQVDLTG
                     WIVVKLIIFGLMLAIVATIQTSLTARMVDQLTKTASSLNRESFGQGLTNFIICLFGGL
                     AGSALVGQSKYNLKLGATSRLSTLAAGIVMLLFLVLLSPLVGNIPMVVLAIVLTRIAM
                     NAFDRQTLRYIVERRWTEFMIMLITFLLIVTAHNLALGVVVGTAVYYSYQRIQKFRKG
                     RDQHGS"
     gene            complement(14578..15819)
                     /locus_tag="PTC28_001118"
     CDS             complement(14578..15819)
                     /locus_tag="PTC28_001118"
                     /EC_number="3.5.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazolonepropionase"
                     /protein_id="HDK5716414.1"
                     /translation="MTYDLLIQNIKELILPVTTERPLKGKDLDELNVVKHGTVVVHEG
                     KIVYAGPYTEDYEARNTIDASDRVVSPALVDAHTHLVHGGSREHEMALKRQGKSYLEI
                     LESGGGILSTVEATRQATEDELFKKAEYDLLTMVHHGVLAVESKSGYGLNKENELKQL
                     RVSKRLEEKYGLKMRHTFLGPHAIPKEASSQADFLQEMIDLLPEAKKYADFADIFCET
                     GVFTLEESKRYMEAAKELGLRVKIHADEIDPLGGLGLAIEEDAISADHLVASSDKDKA
                     NLKDSDTVAVLLPGTTFYLDKESYADARGMLDNNGAIAIATDYNPGSCVTNNLQMVMA
                     IASLKLKLSPAEIWNAVTVNAAKAIDVDAGTINEGDEANIVIWRAPNHEYIPYHYGVN
                     HVEKVIQNGRVIVDRQPQLLT"
     gene            complement(15816..17480)
                     /gene="hutU"
                     /locus_tag="PTC28_001119"
     CDS             complement(15816..17480)
                     /gene="hutU"
                     /locus_tag="PTC28_001119"
                     /EC_number="4.2.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002506874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HDK5716415.1"
                     /translation="MRNIQAKKGLEIECKGWEQEAVLRMLYNNLDPEVAEHPERLVVY
                     GGIGKAARNWEAFDAIVDTLRRLENDETMLVQSGKPVAVFKTHEEAPRVLLSNSVLVP
                     KWATWDHFHELDKKGLMMYGQMTAGSWIYIGSQGIVQGTYETFAELANQHFNGSLKGT
                     ITLTAGLGGMGGAQPLAVTMNGGVVIGVDVDPTRIQKRIDTRYCDTITHSLDEALEKA
                     EKAKKEGRAIAIGLVGNAAEVHHEILKRGFKIDIVTDQTSAHDPLNGYVPEGYSLEEA
                     AALRDSDPAKYVTLSKRSMKKHVEAMLQFQKNGAIAFDYGNNIRQVAFDEGLENAFDF
                     PGFVPAYIRPLFCEGKGPFRFAALSGDPKDIERADQLMRELFPEDEKLMRWLDMASEK
                     IAFQGLPSRIAWLGYGERAKMGLALNELVRTGEISAPIVIGRDHLDSGSVASPNRETE
                     AMLDGSDAVGDWAILNALINTAAGGSWISVHHGGGVGMGYSLHAGMVVVADGSERADR
                     RLGRVLTTDPGMGVVRHADAGYEKAIETAKTRGVDMPMITKEVETE"
     gene            complement(17502..18806)
                     /locus_tag="PTC28_001120"
     CDS             complement(17502..18806)
                     /locus_tag="PTC28_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjiH family protein"
                     /protein_id="HDK5716416.1"
                     /translation="MKHQTVKGNQMWRFWVLSSIGVICFFVPFQINGVQTIIVDHVHL
                     AIRAGLKSVMPYIALTMILIGAILPIYRKDYRKTKTDFVIVLAKVLGAVIGVMYVFHI
                     GPKILFEVQYGPFLFDKLMLPLSILIPVGAIALSLLVGYGLLEFIGVLMQPIMRKVFN
                     TPGESAIDAVASFVGSYSLGLLITNRVYKQGVYNYREALIIATGFSTVSATFMVIVAR
                     TLDLMAHWNLYFWSCLVITFVVTAISTYLPPISKASKAYYNNQQPPIKPKEEGTRIQQ
                     AWLAVKRQSHQATPLFKNMWTHFAEGLEMTVAILPSILSIGFIGLLLANFTPVIDILS
                     YIFYPFIYIFPIAEKALLAKASAISVIEMFLPSLLVVKATIEVKFVVAITSVSAIIFF
                     SALVPCILATEIKVPIWQLLLIWFVRVTITLLITIPLSLIIF"
     gene            19006..19887
                     /locus_tag="PTC28_001121"
     CDS             19006..19887
                     /locus_tag="PTC28_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDK5716417.1"
                     /translation="MKVIQLEYFIEIVHQNSFTKAAQALHISQPSLTATIKKMERDLG
                     YQLLKRTTKEISITEKGIQFYNEAVELVKHYHQSIEKMYDLKMSQTPKIKMAIIESTA
                     RWVSTVIQTHQNAHPEQHYQITEILDPNQLAQKLINFDVHLGLSNDQIRHDGIISLPL
                     YQEDYVVLTPQNAFGNQKSVSIKNLPLIVPNRGYQVRKHIDDYFTRLDERPHIIMEVD
                     RFETATNFVHQGMGYAVIPQMYYQSYSTFQLSAIKIRPNIKRTIYLNYSKKREYNQHV
                     FNLVDACCEYWNIERKV"
     gene            complement(20076..20960)
                     /locus_tag="PTC28_001122"
     CDS             complement(20076..20960)
                     /locus_tag="PTC28_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HDK5716418.1"
                     /translation="MNRTRISGFQWALTIFVFFILSYATPIILQDFQKASGFKSFVFS
                     LNSLGPFIAAVLCILIFKNKKEQVAGLKLTINLKVIERLLIAFTLPLIIFMIGTYVFN
                     TYADSFILLQSKDLSETIWTILIGHILMAFFIEFGFRSYLLNMVEIKLPHFFSNIVVS
                     VLYLIWDVNTAFGMPYTMYSAIYVFAFSMIAGELVRGTGGRSIYVATLFHASMTFAKV
                     FFFSEEIGDVFSMKVLAYSTASVAIVVVVLGLIMRLFSPRKKGEDDDTPMLMDTATEG
                     EKVETEQEVEVASTKEEK"
BASE COUNT         6683 a         4467 c         3641 g         6313 t
ORIGIN      
        1 aatcgatatg ctataatatt gttaaacatg tttgggaggg gttcgtatga ataaagaaac
       61 acggcaaaag aagctgttgg ccttgattca acaagacaaa ccgatgactg cccttgaatt
      121 agcgcaagct ctcaacgttt ctaaacggac tattttacgt gacatgcaag aattagaagg
      181 taaaggcgtt caaatagtcg cacatgcggg gatgtatggt ggctaccaac ttcaagcgaa
      241 tcaacattac tatcaattga acttgacgca aacagaatta caagcgctct atttaatatt
      301 aaaagaaagc caagcacagt cgacattacc ttatgaagca gcaacgaatc atctcattca
      361 aaaaatatta aaacaacctt acacacatat tcgacgtaca ttacgtcaac tggatcaata
      421 cgttttatac gaaacacgtc agcaaccacg cttgcccgtt caattcagtg acattttaat
      481 atattgccaa gagcgcaaag tgatgggcat tgactataaa agcgatgcaa atggtgaaca
      541 acgctttgaa aatgtcattt ttattggctt gattgcacgt cgcgacggtt ggcaagcgat
      601 tgtttatcat attggcggcg attatacaca atatgttgat atctctacga ttgaagacat
      661 ttcgtattct ttccaaaaat caatacaaac gaacgatatt acacttgaaa actacgaaac
      721 ctatttaaaa gattcaaaac atcaataaaa ccaatgtcat gcctaaaagc gtaacattgg
      781 ttttttctat gtgggatgtc actattgtat gattgtgacc acgaacgaaa taaaattatt
      841 taacatatga aaagcgatcg acacacctaa attacggcca cttttgatat ataagaacac
      901 aagtggtacg gctaaaatta agtaatcgat catttcaaat ggggaggtcg cttgaagcac
      961 gtgtaccccc gcaaacaaca aggctgaaat aacggccatg actttaaagt tcaatttctt
     1021 acctaattcc ccaattaaaa tatgacggaa gaaaatttct tcaacgactg gtgctaatat
     1081 cacaatcatc atgaaattga ttggcgtaaa ccacggaata gcgaaaagtt ggtcgatcag
     1141 catctcgttt tgcgtcgtat catattgaaa tcgttcgggc aaaaactgtt gtagataacc
     1201 atagagggtt gaagcggctt gtgcaacgag gtatgcccct acaatccaaa atatgtattg
     1261 gcgtatccct tgaagcccct tcataaagcg ttgccccatc gttttataat gtaacaagta
     1321 aaaactaagg atgacaatca agtaagcaac gactgtagca atgacttgtg cgacgagtgc
     1381 atttgagtca gacaataacg ccgcttcact cacattgaaa aacacaaagc taatgatagc
     1441 aacaagtatt ccgaaaacga acgttgcaac gataacaata ggaactaata ataagtcccg
     1501 ccaagcaata tctttccatt tatattttga catttgaata ctctctttcc tttaaaaatg
     1561 tacgaacggt tgtatatata tcacagacct gtgacttttt tacagtttga tacaacactt
     1621 acgcacgtga atgattcttg ttatactata tattatttca tgaaaggacg ctactgatga
     1681 acggttatga aatgcccaat ttgatacaag cactcgaggt tttgaatgaa ctgttagact
     1741 taaccacaac ttacgattta acctacgcac gagatcccga atacgcacaa gacatattga
     1801 ccaatttgaa agcgaaagtc caatcgcatt atctacagtc acctcaaccc gttcatacac
     1861 atgcatacag tccctatccc tacgaccttt actattgttg tctttacaac ttgtatcaca
     1921 atccattagt ctctatcaat tttggcagtc aacgtaaatt gaatcaaagt tatatccaac
     1981 aaattacacg aacacgcgct tattttcaaa tgtgtacggg cacattttaa aacacagttt
     2041 gtgcgatttt cagcaaattt aaaaagcgga atgacatgtg ccatcccact ttaaacacgc
     2101 tttacaatta aaaatcgaca cgcatattga agcacggatt catctcaact atgcgaatat
     2161 aagctcgatc attataatat cgctatgtat ctctttccca aaatacaata cgatgcttgt
     2221 tacttttata atttaaagtc ttctttatcg cgtttatgat aaccgcgtaa gaagaaaaat
     2281 acggccataa aacctaagaa taagaaaccg ataatcacag atacacgtgt ttcgttatta
     2341 attaacattg caactaacac cattaataaa aatgcgattg acagataatt tgtcactggt
     2401 gcaagtggca ttttgaaagg atggttttct aatttttctg gaaatttctt tctaaattga
     2461 atatggctaa ataaaatcat aaaccatgga atcattccag gtaaaataga tgcactataa
     2521 acataaacga aaatattttc agaaccatcg ataaactgtg gtaatacaac atttaaaatg
     2581 acaccgatta aaataccaat agatacagct aaaactgtat aaaatggtac accgtttctc
     2641 atgacttttg taaatatcgc tggtaattga cgatgttgtg ctaaagtaaa aatcatacga
     2701 cttgagctga aaatacccga gttacagcct gacatcgctg ccgtaatcac aacgaagtta
     2761 attaaacctg ccgctatcgt aattccgatt tttgcgaatg ttgcaacaaa tgggctacca
     2821 atgtcatgca attcattcca aggataaatc gttacaataa caaagatggc accgatataa
     2881 aagattaaaa tacgccaaat gacgccgttg actgcttttt taatattttt ttgaggatcc
     2941 tttgtttcac ctgctgtaat accgatcaac tcaacccctt gatatgaacc gataacaata
     3001 gataaagcaa agaaaaatcc tagccaacca ttcggcataa aaccgccatg tgctgtaaga
     3061 ttgctaagac ctattggatt gcctccgttc cctataccga agaagatcaa accgaaacca
     3121 gcaataatca tcaaaataat tgtcacgatt ttaatcatcg caaaccaaaa ttcaaattca
     3181 ccaaacgctt ttacagacac agcattggca gctgttaaca gaacaatgac aatcagtcct
     3241 ggaatccatg ttggtaattc tggaaaccaa aacttcatat atgcgccgac tgcaatgact
     3301 tccgacatcc ctacaacaat ccattgaaag atgttggccc atgcagtcac gtaacctgca
     3361 acagggtgga tataatctgt agcaaagttt gcaaacgaac cagttgatgg atcaagatag
     3421 accatctctc ccattgcacg catgattaaa aataaaaata aacccgcaac taaatatgca
     3481 aaaataacag aaggacctgt ccacgcaatt gtacttgatg cccccatgaa taatccgaca
     3541 ccgatagtac caccgagtgc gatcatttga atctgtcgag aacttaatcc tctgtgtaat
     3601 tgattatctt ccatgacaac gttccatctc cttttgtaac ccctactcat ataaaattga
     3661 tgttgaaccg tgcatgtcgc tattatacta taaactatca gaatttgaag aaaaaattaa
     3721 aaatgttaac ccattcattt acattcctat tttcatctcc aaacagccct gctacctgta
     3781 tatccgttac acctttaacc attgatatat cgaccatcct atacacagta atcttatcct
     3841 actaaaaatc gcatttagat atgttgacgt ttacaccatc gaccgtcgaa atattgtcac
     3901 attaaactat tgtgaatata ttcacattag cttacgaatt gcttatacta ggtttattat
     3961 ttaagaaagg aatctaattt atgaaagata ctaatatcaa atgggataca attttttatg
     4021 gtcgccagtg ggtttcaaat attattgaga cgattcaaaa gaaagatgta cttcagagct
     4081 tttatctaag gcgttattta ttaagagcaa tgatggcagg atttattatt agcatcataa
     4141 ccgtttttgt attaacagtt aaaacaacat ttgcgcctga cgtagcgccc ggtctcgtga
     4201 atatggcggg tgcatttact tttagttttg ccctcgtgtt aattctgttc acaaactctg
     4261 aacttctaac gagtaatttc atgtatttta cggtgggttt gtattatcat ttgattcgtc
     4321 caacacgtgt aattaaaata ttcacactat gttttgttgg gaatatgatt ggtgctgtca
     4381 ttttgtttag tttactccgg ttttccaatg tcatgacacc ggatatgcta caaatgcttg
     4441 accataccgt acaagtcaaa attcatgatt atagttttca aaacatttta gtccgtgcta
     4501 ttttcgcgaa cttctttatt aacattgcat tagtcattgc catgcaaatt gatgatgtgt
     4561 tggccaaaat gtttgtcatg atgttcggtg taacgatttt cgcgtttatg ggctatgaac
     4621 acgttgttta taatgcttgt ttgtttattg ccagtgccat ttatcaaaca gacgctttca
     4681 atatgctgca tatggctaaa aacattatcg gggctttgct tggaaactat atcggcggtg
     4741 gactaatcat cgggctattt tatgcttatc tgaatgatca cggtcaattc aaagcgatca
     4801 aaaaggaaaa caaaaagaac taatgcatcg tttgtgatag ataagtacac gtcatcattg
     4861 attgcggtct atgttataat aaggacaatt caaagactaa ggagcatatt atggatcgca
     4921 cacgtatcat tagaggtgtc ctcatctcaa ttattttagg tctactcttt ttcttcctaa
     4981 atcaaacaca atccacatat acgacaaccg agttattgtt acgttcagta ctcgttgcca
     5041 ttgtctttgc ggtattatac ttcgttgtct tcacgatttt aagccacgac acacgaagac
     5101 gcatttatgg acctccccta cttattggca tcatcttagg tatactagtg gggcaatggt
     5161 tagagcatgc tatagtaggc cttgcactcg gggttgcagt tggcttaatc gtcggtgcaa
     5221 tacgacaacg ttttttcaag gagtgatgaa atatgtcaac acaaacgatt ggtatcattg
     5281 tcatcgtaat tcttttaatt agttttcttc ctaacgccta tatgttatat aaaacttcaa
     5341 aagaaggcac tgaaaacaca cgttataaat taatggtcgg tgtagacgcc atgctattag
     5401 tgttaattat tgctgccatc ttactattaa cctaaaccac cctcatgaca tcacaacaga
     5461 atcattgttg aacttaactt gtggtgtcat gaactttctc tttgttactc cagagagata
     5521 aaaacatccc tagttactac gctgctccac attatcacca tctcttttgc aacaaatgcc
     5581 acatgccata gtccaaaaga aaaacgcaga taccacccac tcaaatgagt atgacaccta
     5641 cgtttaacgt taaattttac cttgtaagaa aaaataataa atgattgaag caagcactgc
     5701 gtatacgatg agtcctgttg cagcggataa cagatgaacg cgcatcggaa tatgcttttg
     5761 aaaacgtggc gctaatacta aattgccgac taaaataatc aaaggtgcca caatgaaaaa
     5821 taaaatcatt tctaaactca tcgttgtact ccatcaaaat attgtgcgac gacttggctc
     5881 aaatcgacat ctttagcaag caagtccaat tctgaaaaat cgctctgagc cgtgaattga
     5941 tttgagttca cgataacatc aagtcctgca caaatcgcac ctgtcgcacc attcactgaa
     6001 tcctcaattg ctaaacaatg cgtcggacta taattcagtg cttgtaccgc agctaaatat
     6061 aaatcagggg caggttttac tgtttcaaca tcttctcgac ctttaatcac tgaaatatac
     6121 ttttcgatac ctaacttctg aactaatgac tcaatgtgat gtcttgtact acttgaagca
     6181 atccccatcg gaatgtgacg ttgatgcagt tgttgcatca gttctaacac accaggtctt
     6241 aaaggcagtt gtccagctgt ctcataatgt tcttgataga cttgatctgt taacatttct
     6301 cctaaatgag taagtaaatg ttggtgaatc cctagcgctc gtccgccaat attcgaacga
     6361 taaaagtctg cgctcatatt ggcatgacct gcctcattca aataacgatt cactgtttca
     6421 tataaatgtt gttcggtatc gataatcgta ccatcaaaat caaaaatgac tgcgcgatac
     6481 atgcttgctt cctcctaaat tcttggttcc ggtttcttca ttcattgtta aaatccaggt
     6541 gctaacgttg caaattcata cataatttta ttttgacgat agtacagtga tttaaaccaa
     6601 atacgatcaa taacacctga atgtttgccc gctaaatgat catgtagtga aacgagttga
     6661 tttaatgtgt catcattttc tgttgcaagt gcgtgatggt gaacataacc gcgccctggt
     6721 cgaacattag gaccgtcttt ttcgatgatt acgaggtctg aataataccc ttgatcatca
     6781 atcgcaacga ctgactgctc accaaattgc gctttatctt taaaatctag tgtgtcgcgt
     6841 aaatagtcta acgttttctg tgcatctgca acgtggattt caatcggtcc tagtcctaaa
     6901 atttgatact ctgcaggaat gtcattatcg actggatttt gccatccatt tggaattact
     6961 gcatcgccat tcaccatcat gacatatgac aatgtatctg gatcgtcaaa atacagtgcc
     7021 ggttgttcca tgtaagtgcc tcttgaaatg ttcgtcgctt tttcttgtaa gcgtgcttca
     7081 aagaaatcga gtgctgcttc atttggtacg agtagcccaa ttctcgcaat catgtttgtt
     7141 cctttacgca ttgcacccgc atttggaatt tcaaaaaatg tcagtaatgt gcctggtgaa
     7201 ttttgttggt caccgtaaaa aatgtgtacc atgccatgat catcttggtt gaccgtttct
     7261 ttcgttaagt gtaagcctaa tgtttccgta taaaatgctt tgttttgatc caaatcttta
     7321 gtgtacattg agatatgatg atgtccagta atgttcacga tacacccctc caagtgttat
     7381 tcaagtatga tttaaataaa gtatattttt tatatctaga gattgcaata gatatgatta
     7441 ggatacagtt ggcaggagta tgaaacagac aacaccaata atgatgatag ataatggaaa
     7501 aacaagcgtt tgaataaagc gtacttttcg ttctgataat gttgtgcgta agagccaagt
     7561 ttcaatggta aagttgatca tagtcaatat cgcagtcaat gaaagtaata acgtcaagcc
     7621 attctgaaaa ttcatcaaaa agccgactga cagcacgagc atcataaaca atatggagac
     7681 cgtgataaag taattttgta gcactttcat catcattttt acatcacacc ctttttaagg
     7741 cttcattatt ttatatattt aaacattatt ttcgcacaac ctaataaaaa agtaaaaccg
     7801 ctagcaatcc tacaatagcg aatcatgaaa agaaaaagaa tagcccctat cctatcgcct
     7861 ttaacgacat gatacgccta ttctttctaa aaaattattt tgattttgct gcccagtatt
     7921 tcgctaatat cggtcctgtc actaaatgaa ccacactaaa tattgcacct ggtactgcag
     7981 ctaaaggatt aaaatggact gtcgctaatg atgcagctaa gccagagttt tgcatgccga
     8041 cttcaatcga aactgttttt tggtctgtat aatttaattt aaacaaatgc gaaaaccaaa
     8101 aacctaacaa ataaccgatc gcattatgta tcactacgac taaaaagatg agcaatcctg
     8161 tttgaataat gagctcacca ctgcccgcta caaccgcacc taaaatcact gaaatcgcaa
     8221 taactgaaat aattggcaag atgtcttccc ccacatgtgc cacaggttta agaaatcttt
     8281 gaattaaaat acctaacact aaaggtacga ggacgacttt aacgactgaa ataaacatcg
     8341 cgataaacga aacgtccatc cattcttgtg ctaatacaaa cattaaaaat ggtgtcatga
     8401 acgacgcaag tatggttgaa attgttgtaa tcgttacaga taatggcaca ttcccttttg
     8461 ccaaataact aataacattg ctcgacgtac ctcctggaca acatcctact aacagtacac
     8521 caatcgcaat atcagctggt aattgaaata acttcacaac cgcatatgca gaaagcggca
     8581 taatcgtata ttgtaaaacg atcccaatta agacagcttt cggttccttc aatattaatt
     8641 taaagtcatc aactgtaaca gttaaaccca tccctaacat aacaatacct aataaatacg
     8701 gtacaaacgt tccgaatcct ttaaaaatat ccggaattaa aaacccggta atactcgcca
     8761 ataacatcca taataaaaat gttttagatg caaatcgacc taatcgttgt aacatggcat
     8821 tcactcccca atgcaattaa taagcagaat attatcacaa ataaatgcgg tgtacaattc
     8881 tttttacaaa aatatttagt ttaaatacat aaatatcatg gtcactttac atctatagtc
     8941 ttactgaaaa tacaaatgac tcgtgataca atgaatgcaa caatatttaa aatggggaat
     9001 tagaatgata atcgataaaa tagagacatt tattttaaat atagatcaaa tgacaagtcg
     9061 ctttgccaga cgaaaactat taaagttatt aaatgggatg aacctccatg ccacaattca
     9121 aatagaatgg ttgaaacatc agcaaaatta cctactcaaa attcatttac cgaaacaagc
     9181 tttgccctat ttgattagtt ttttgagctt ccatcattat cgcatttacc aaattgtgcc
     9241 tttccaatta cttgatgcta taaaaccatt acaccaacgc ccccacgagg aacatcgctt
     9301 tgaaatgatg attgacggtc tagacgaccc gtttattaaa gataaagtga ttgatatttt
     9361 aaatggtttc caaagtgaac gtatcattta cagttttgca aaagacattt tgaaggtgac
     9421 gacaactgca gaagtgatga gtgcgttagt tggcacttta gcaacgcgca atattgatat
     9481 ttatcatgcg aacacagctg cacgctgttt ccataaaatg cgtatttcat aggctatgca
     9541 tcatctctct ttcagtagca tgacgtcgat gtcatccact gcttgattca atgcattaaa
     9601 aaaacggcac agcgcacttg cctgtaccgt ttattcttca tctattctta ttcattcaat
     9661 tcaaattctg cttctaattc acgttgcaac acatcaaaca tcaattcaaa accatgtgct
     9721 gtatggtcgt gataagcttt cttttgttgc ttatattcaa ggttggtcaa tcggcgttct
     9781 ttaggcaaca tacctctata atgaaacgtc atctcagtca tccccggtga tcgttcttca
     9841 aaatagactt caatctcatc aacatgttca ctcaattccg gcatctgaat cgttttcaca
     9901 atttgctcgc cttcttttaa cgttttatac gtgccgatga cttcaatacg tttcccttta
     9961 cgtaaatcga caatttggta atgacctcct tcaacaggat cattttcgat aacttggttt
    10021 gttcggcgtg aagtcataaa ccaatgtatt aattgattag ggtctagcca cgcatgatac
    10081 gcattcaaag gtgtcgtttt catcaaacgg acaagctcta tttctaccca ttcattttgc
    10141 atatgcttca cttccattct ccttactttt tattcatttc ggatgacctc tattgtaact
    10201 taaatctatc aagaactaaa tgaaggtgtg tttttatgac tgtgattcac tctaaaacca
    10261 attagcgatg agaacgtaag cgcggtagat taaacagaat ggcgataatc ccacaaatcg
    10321 caagcatcac agggtaaatg gaatacggca acaacgtcac aggtgaaatg ctcgctacac
    10381 cggctgctgc aatgagctgt ggactataag gaacaaagcc ttgaaatgca ctgccaaata
    10441 tatctaacaa actcgccgat tttctcggat caatatcata ttcttccgca atgtccttcg
    10501 caagtggacc tgccataata atcgaaatcg tattattcgc tgtcgaaata tcagcaacac
    10561 tgacaaggct cgcgatacct agttctgcac cacgtcgtgt tttaacgcgt tgtttaacga
    10621 aatttaacag ccatgtaatc cccccgtgat gttcaacgag acctatcata ccaccgatga
    10681 gtaatgcaat catcgcaatg tcttgcatac caagaacgcc ttctgacgct gctttcaata
    10741 gcccccctaa gttaaatgaa ccatcaatca agccaattag agacgataac aaaatgcctc
    10801 ctaacaacac taacacaacg ttaataccga taaccgccaa aattaatacg agtaagtacg
    10861 gaaccacttt aacccattcg aagtcgtacg ttttcgtttg tgtcacatca taaccgtgag
    10921 aaagccacca taaaacgaaa atcgtgacga tagcacccgg cacaacgata cgaaagttca
    10981 ctttaaattt atcgctcatt tgcgtctttt gcgtgcggac tgcggcaatc gttgtatctg
    11041 aaatcatgga caagttatcg ccaaacattg caccaccaac cactgtcgcc atcgcaaatg
    11101 cagcagggat ttctgttgct tcactaatac cgaatcccac aggtgcaatc gctgctacag
    11161 tccctaccga cgtccccatc gaaatagaaa taaacataca aatgataaaa agtccgacga
    11221 tcaagaaatt ttgcgggata aatgataacc ctaaattgac aatggaagtc acaccgccca
    11281 tcgcttcagt tgtttttgaa aaggcccctg caagcaaaaa gataaacatc atcaacacaa
    11341 tattagcgtg tcctgcttga cgtgcaaaaa cttctacctt tgacataaat gtttcgcgtc
    11401 ggttcatcat taacgccaca acgacaccga taatcgcggc aacatttaac ggcataaaag
    11461 taaagtcttt cgtgatgata cctgcaccta aaaagatact aataaatacg actaacggaa
    11521 tgagcgccca tggactactg tgctcatgct cttgttctaa cataaaaaat ctccttaacg
    11581 aaaagcaaat cacctgtttg aatatgtgtg atctacttgt ccttcacttt atttttatat
    11641 cttttataaa agcaaaaaat catttttaat gacatttgaa aaattgaatt ttactgttaa
    11701 acaatacatg aaaacattgt gaccgtcaac gtcttaaatg ttcatcccat aaacgctgaa
    11761 tgaacgcaat aaaataatca ggtactttat ctaaaatttg ttcgttcggc tggaattgtt
    11821 cgtgatgcag tgggtattca ctgtctgagc caatcatcgc aaaatgaaca ggtgccacag
    11881 cttgataacc tgagaaatct tcacctatcg ttagtgcgcg cggtaacact tctgtctcat
    11941 aaccgactga ttgtgccact tccaacgcta aattttgtaa cgtttcatca ttgatgacag
    12001 aggcagttaa acggtgataa tccaaatcaa tcttcacatt aaactgtttt tctaatcctt
    12061 cacaaatttg ggtcattctg tcttcaactt ggtcacgaat atctgcttta aaactgcgaa
    12121 ctgtcccttc taccatcgct tcttgaggga taacattcca cgtatgaccg ctatgaattt
    12181 gacctatcgt gacgaccgct tcctcataag gcgcaatgtt gcgactcacg atcgtttgta
    12241 agcttaaaat aagttgtcct aagacgattt gcgggtctac tgaatcttga ggcattgctg
    12301 cgtgcgcgcc tcgaccttga atacgaatgt tgaaacgatc gacatttgac gttaaatgcc
    12361 ctgattttgc acgccattca ccgactttta tcattggtgc attgtggaag ccaagaatcg
    12421 ctaacgcccc atctaatgcg cctgtctgaa cgacagcggg tgccccatca cctgtttctt
    12481 cagcagattg gaaaataata cggacacgtc ccggcaattc tgattccatc tctttcaatt
    12541 tcactgctgt accgagaata gaagccatat gaatatcgtg accacacgca tgcatcacat
    12601 tatcattttg tgattgatac gctaagtttg ttttttcatt aatgggtaac gcgtcaatgt
    12661 ctgagcgaat cgcaatcatt tcttcccctt gccctacttc tgcgataagc ccgaccttta
    12721 acggtaagtc gagtattcga atatcgtaac tttctaaaat ttctcgtaac cgtgctgttg
    12781 tttgaaattc ttcattggaa agttctggat tttgatgaaa ccatcttctc cattcaatta
    12841 attgttttaa atcagctgcc atgttgatcc cttccttttc gaaatttttg aatccgttga
    12901 taactataat aaaccgctgt gccgacgact accccgagtg ctaaattatg cgcggtgaca
    12961 atcaataaaa aagtaatgag cataatcatg aattctgtcc aacgtcgctc gacaatatac
    13021 cgcaatgttt gacggtcaaa agcgttcatc gcaatacgtg tcaaaacgat agctaacacg
    13081 accataggaa tgttgccgac gagtggactt aataacacta aaaataacaa catcacgata
    13141 cctgctgcca aagttgaaag tcgtgacgtt gcacctaatt taaggttata tttcgactgt
    13201 cccactaacg cacttcccgc aagcccccca aataaacaaa tgatgaaatt tgtaagccct
    13261 tgaccaaatg attcacgatt gagactgcta gcggtttttg ttagctgatc gaccattcgc
    13321 gctgttaaac tcgtttgaat tgttgcgaca attgctaaca ttaggccaaa aatgattagt
    13381 tttacaacta tccaccctgt taaatcaact tgaggtaacc cgagcgttgg catttcgaat
    13441 tggatatacg ctaaatcttg tacgaccatt aagtcgacat gaaacatttt ggccgcgatg
    13501 gataaaacga caatcataat gagtgcagca gggatacgtt ctgtgatatg cggaatgaaa
    13561 aatatcatga ttaaactgag cactgcaaag aggtatgtcg atagattgtg acccaaaata
    13621 tgttttagtt gcgaggtaaa taataaataa gctaacgcat tcataaatcc aacaacgacc
    13681 ggtactggaa ttttatgtat cgctttatcc acacgacaaa atgcgaatat gatttgaaat
    13741 atgcccatga tgagcatcgc tgcaacgagc atctgctggc catacattga ggtgattaac
    13801 acagcgacaa tggcgacccc actactcggc gaagaaacca ttaatgtgcg ggaacctaaa
    13861 aaactgattc cgatgagcat aagtgcggta ctgaatatgc cgactgttgg gccaacgcca
    13921 gcgataaatg aaaatgcgat agcacctggc accatagcta gagcaaccag taagcctgct
    13981 gtgatgtttt ggaaagtatg tcctctccag cttgtgaggt aattttggat tgtgtgatgc
    14041 atctccatcc cccccgactc ccttatattg cattatatta tatcaaagca atcgggattt
    14101 gttgattatt ttaggttttg cgtgatggtt ttgatacatg gttgttatgt ttacaattgc
    14161 gttgagcata atctaacgat tgcttaaacc gtgctgcgct ttccgaggcg ctgaaactcc
    14221 aactcaattc ggctcgattg ggatgtgcac ctggtggaag ccgaattgaa ttttccgttt
    14281 cagctgatgc ctcaggagtc tcgcacgatt tcggcaatcg tatcgctaca gtattgttat
    14341 tcagcgttcc aaaaacactt cacgctttat gggaaagagt gagattggac ttgcctcaac
    14401 tcaatttggc ttgattaaaa tgtacacttg atggtagcca aattggattt tgggaggagt
    14461 caacggcgtc gtttctgttc ctatcatatt cagcgcgtgc tgcatttcac aaaaagatga
    14521 agcggatggc aacctcttat acaaggtatt tatccgcttc gtttattgtc attatgctta
    14581 tgttaatagt tgtggttggc ggtcaacgat gacacgtccg ttttgaatga ctttttcaac
    14641 atggttcaca ccgtaatgat acggaatgta ttcatggtta ggtgcacgcc aaatgacgat
    14701 attcgcttcg tcgccttcgt taatcgtacc cgcgtccaca tcgatggctt ttgctgcatt
    14761 gactgtgact gcgttccaaa tttcggctgg tgataatttt aattttaatg atgcaatcgc
    14821 catcaccatt tgtaaattgt ttgtgacaca gctacctggg ttgtagtctg tcgcaatcgc
    14881 aatggcaccg ttattgtcta acatgccgcg agcgtctgca taactttctt tgtccaagta
    14941 gaacgttgtg cctggtaata ataccgctac tgtgtcagaa tcttttaagt tcgctttgtc
    15001 tttatcactt gatgcaacga ggtgatctgc agaaatggca tcttcttcaa tcgctaagcc
    15061 taaaccaccg agtggatcga tttcatctgc atgaattttc actcttaagc ccagttcttt
    15121 cgctgcttcc atataacgtt ttgattcttc taacgtaaat acacccgttt cacagaaaat
    15181 atctgcaaag tctgcgtatt ttttcgcttc tggtaataaa tcaatcattt cttgtaagaa
    15241 gtctgcttgt gacgatgctt cttttggaat agcatgtggt cctaaaaaag tatgacgcat
    15301 tttcaaacca tatttttctt ctaaacgttt agaaacgcgc aattgtttca attcgttttc
    15361 tttgtttaag ccgtatccac ttttactttc tacagctaat acaccatgat gcaccatcgt
    15421 taataaatca tattcagcct ttttaaatag ttcatcttcg gtcgcttggc gtgtcgcttc
    15481 tactgttgat aaaataccgc cacctgattc aagtatttct aaatatgatt tgccttgacg
    15541 ttttaacgcc atttcgtgtt cacgtgagcc accatgaact aaatgtgtgt gtgcgtcaac
    15601 aagcgcgggt gaaacaacgc ggtcagaagc atcaattgtg ttgcgtgctt cgtagtcttc
    15661 agtataaggc cctgcataga caattttccc ttcatgtacc acgactgtac cgtgcttgac
    15721 aacatttaat tcatccaaat ctttaccttt taaagggcgc tctgtcgtta ctggtaaaat
    15781 caattcttta atattttgaa tcagtaaatc ataagtcatt ctgtttctac ctccttagtg
    15841 atcataggca tatcaacgcc acgagttttg gcagtttcaa tcgctttttc atagcccgca
    15901 tctgcatgtc gcactacacc catacccgga tctgtcgtta atacacgtcc taatcttctg
    15961 tctgcacgtt ctgaaccatc tgcaacaact accatgcctg cgtgtaatga atagcccata
    16021 cctacgccgc ccccatggtg aactgaaatc catgaacctc cagctgctgt gttaattaat
    16081 gcatttaaaa ttgcccagtc ccctacagca tctgaaccgt ctaacatcgc ttcagtttca
    16141 cggtttggtg atgctactga acctgaatct aaatggtcac gaccgataac gattggtgca
    16201 gaaatttcgc cagtacgcac aagttcattt aaggctaagc ccatttttgc acgttcgcca
    16261 taaccgagcc atgcgattct tgacggaagc ccttggaatg cgattttttc acttgccata
    16321 tctagccaac gcattaattt ttcatcttct gggaataatt cacgcattaa ttggtccgca
    16381 cgttcaatat cttttggatc tccagataat gctgcgaaac ggaatggtcc tttaccttca
    16441 cagaataacg ggcgaatata tgccggtacg aaacctggga aatcaaatgc gttttctaag
    16501 ccttcatcaa atgcgacttg gcgaatattg ttaccatagt cgaatgcaat cgcaccattt
    16561 ttttggaatt gtaacattgc ttcaacgtgt tttttcatag atcgttttga taatgtgaca
    16621 tactttgcag gatcactatc tcttaatgct gccgcttctt ctaaactata cccttcaggc
    16681 acataaccat taagtggatc gtgagcagat gtttggtccg tcacaatatc aattttgaag
    16741 ccacgtttta aaatttcgtg atggacttcc gccgcgttac cgactaatcc aattgcaatg
    16801 gcacgccctt cttttttcgc tttctcagct ttttctaaag cttcatctaa tgaatgtgta
    16861 atcgtgtcac agtaacgcgt gtcgatacgt ttttgaatac gtgttgggtc aacatctacg
    16921 ccaataacga caccgccatt catcgtaaca gcaagcggtt gtgctccacc cataccgcct
    16981 aatccagcag ttaatgtaat tgtacctttt aatgagccat tgaaatgttg attcgctaat
    17041 tccgcaaaag tttcgtacgt accttgcaca ataccttgtg aaccaatgta aatccaacta
    17101 cccgctgtca tttggccgta catcattaag ccctttttat ctaattcatg gaaatgatcc
    17161 caagttgccc attttggtac gagcacagag tttgataaaa gtacacgtgg tgcttcttca
    17221 tgcgttttaa atacagcaac aggtttacca gattgcacta acattgtctc atcattttct
    17281 aagcgacgta atgtatcgac aatcgcatca aatgcttccc agttacgcgc tgctttacca
    17341 atgccaccat aaacgacaag acgttccgga tgttcagcta cttccggatc taagttgttg
    17401 tacaacattc gtaaaactgc ttcttgttcc caacctttac attcgatttc taaacctttt
    17461 tttgcttgaa tatttctcac cataagactt ctccctttca tttaaaaaat aattagactt
    17521 aacggaatag taattaataa agttattgtc acacgcacaa accaaatcaa taacaattgc
    17581 caaatcggaa ctttaatttc tgtagctaaa atacacggta caagcgctga aaagaatata
    17641 attgctgata cactcgtaat tgccactaca aatttaactt caatcgttgc tttaacgaca
    17701 agtaacgatg gtaaaaacat ttcaatgacc gatattgcag acgccttcgc taataatgct
    17761 ttttctgcaa tcggaaaaat ataaataaat ggataaaaaa tgtaactcag tatgtcaata
    17821 accggtgtaa agttcgctaa caataaacca ataaaaccaa tcgataaaat ggacggtaat
    17881 atcgcgactg tcatttcgag cccttcagca aaatgagtcc acatattttt aaacaatggt
    17941 gtcgcttgat gtgattgtct tttcactgcg agccatgctt gttgaatacg tgtgccttct
    18001 tctttaggtt ttataggtgg ctgttgattg ttatagtagg ctttcgacgc ttttgaaatc
    18061 ggcggcaaat atgtcgaaat agctgtcaca acgaatgtga tgactaaaca gctccagaaa
    18121 tacaaattcc aatgtgccat taaatcaagt gtacgtgcca cgatgaccat aaatgttgcc
    18181 gatactgtcg aaaatcctgt cgcaatgatt aatgcttctc ggtagttgta aacaccttgt
    18241 ttgtacacac gatttgtaat taacagaccg agcgaataac tccctacaaa cgacgcgacc
    18301 gcatcaatcg cggattcacc tggtgtgtta aacactttgc gcatgatggg ttgcattaac
    18361 acaccgataa actccagcaa gccatatcct actaacaatg ataaagcgat ggcaccgact
    18421 ggaattaaaa tgcttagtgg caacatcaat ttatcgaaca aaaacggtcc atattgtact
    18481 tcaaacaaaa ttttcggtcc aatatgaaac acgtacataa cgccgatcac agcccctaaa
    18541 actttagcca aaacaatgac aaaatcggtc ttcgttttcc gataatcctt acgatagatt
    18601 ggtaaaattg cgccaattaa aatcatggtt agagcaatat aaggcatcac acttttgagg
    18661 cctgcgcgta ttgctaaatg aacatgatcg acaataatcg tttgtacccc gttaatttga
    18721 aaaggtacaa agaaacaaat cacacctatc gaacttaaaa cccaaaaacg ccacatctgg
    18781 ttacccttaa cagtttgatg tttcatccca acatttctcc ccctttgcgt tgtgaatcct
    18841 acacaaaata acgacctctc cccttagtct tgctttattt ttcattattc tgtcatttga
    18901 ttatgcgctg ttactgacta actctattgt aatatgctaa gctattaata actaatataa
    18961 ataaactaat cacttatagc ttcaaactat aataaggagg ccataatgaa agtaatccag
    19021 ttagaatact ttatcgaaat cgtgcatcaa aatagcttca caaaagctgc gcaagcttta
    19081 cacattagcc aaccttcatt gaccgcaacg attaaaaaaa tggaacgtga tttagggtat
    19141 caactgttaa aaagaacaac gaaagaaatt tcaatcaccg aaaaaggcat tcagttttat
    19201 aacgaagcag tggaacttgt gaaacattat catcagtcca ttgaaaaaat gtatgattta
    19261 aaaatgagtc aaacccctaa aattaaaatg gccatcattg aatccactgc gcgttgggta
    19321 tcgacggtta tacaaacaca tcaaaatgct catccagagc aacattatca aatcacggaa
    19381 atattagatc ctaaccaatt ggcacaaaaa ttgattaact ttgatgttca cttaggctta
    19441 tcgaacgacc aaattcgtca cgacggaatc atctcactcc cgttatatca agaagattat
    19501 gttgtgctca cgccacagaa tgcctttgga aatcaaaaat cagtgtcgat taaaaactta
    19561 cctctcatcg ttcctaaccg tggctatcaa gttcgcaagc atatcgatga ctattttaca
    19621 cgtttagatg aacgccccca tatcatcatg gaagtggacc gttttgaaac agcgaccaat
    19681 tttgtacatc aaggtatggg ctatgcagtt atcccacaaa tgtattatca gtcatattca
    19741 acatttcaac tgagtgcgat taaaattcgt cctaacatta aaagaacgat ttatctgaat
    19801 tactcaaaaa aacgcgaata caatcaacac gtctttaatt tagtcgatgc atgttgtgaa
    19861 tattggaaca tcgaaagaaa agtataaaat agtggtagcg ggaatttaat tgaaatcaat
    19921 cagtggagaa gaacaaggtg gcagacgaaa cggacacatg agaagtcgag tcagtcttgc
    19981 ggggacagta cgacgaaatt tttgttgcat aggaaatttt tgtacagctc cccaaataaa
    20041 aaacacccct atattaagag gtgttcttca aaaagttatt tttcttcttt tgttgatgct
    20101 acttcaactt cttgctcagt ttctactttt tcaccttctg tcgccgtatc cattaacatg
    20161 ggtgtatcat cgtcttcccc ttttttgcga ggagagaata aacgcatgat taaacctaat
    20221 acaacaacga caattgcgac actagccgtt gaataagcca atactttcat ggagaagaca
    20281 tcgccaattt cttcgctgaa aaagaacact tttgcgaatg tcatacttgc atgaaacaat
    20341 gttgccacgt aaatcgaacg accacctgta ccacgcacta attcacctgc gatcatcgaa
    20401 aacgcaaaga cgtaaatggc actgtacatc gtgtaaggca taccgaaagc cgtattgaca
    20461 tcccaaatta aatacaacac actcactaca atatttgaga aaaagtgcgg taatttgatt
    20521 tcaaccatat ttaaaagata agaacgaaat ccaaattcaa tgaaaaaagc catgagtata
    20581 tgaccaatta aaatcgtcca aatcgtttcg gataaatctt tagactgtaa taaaataaag
    20641 ctgtcggcat acgtgttaaa aacatacgtg ccaatcataa aaataatgag cggtaacgta
    20701 aaagcaatca acaatcgctc gatcactttt aaattgattg taagttttaa accagcgact
    20761 tgttcttttt tatttttaaa tattaatata cataatactg ctgcgataaa tgggcccaat
    20821 gaatttagag aaaatacaaa tgatttgaat cccgacgctt tttgaaaatc ctgtaatatg
    20881 ataggcgttg cataggataa gataaaaaac acaaaaatcg tcaatgccca ctgaaagcca
    20941 gagatacgcg ttcgattcat aattaatcct ccatattaaa caatcactat taatgttcgt
    21001 atgcatgagg tagtccagtt aaggttctta ttgctaatgt ctgttggacg aatatcaagt
    21061 catagaatct aaggtacatt ataaccattt atggaaaaga aata
//
LOCUS       DANHPA010000038        21068 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.038, whole genome shotgun sequence.
ACCESSION   DANHPA010000038 DANHPA010000000
VERSION     DANHPA010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 21068)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21068)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21068
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.038"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            62..673
                     /locus_tag="PTC28_001123"
     CDS             62..673
                     /locus_tag="PTC28_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HDK5716419.1"
                     /translation="MSKFDEQITVVPRRLLFEEEALAFNGFLDQSEEKGQKIYEKLSQ
                     YEVKRRGDMEEDPSFKQLISYCLIENEHDELLVYERLSGGGEARLHGNASIGVGGHMN
                     DVPEAHHIDEVIKTNASRELEEEIGVKINNQTPLEFIGFINDDHNEVGQVHIGVVFKV
                     KVKQQDVEVRETDTLKIQWQPLSQISDTSAFESWSALILEQLK"
     gene            683..1606
                     /locus_tag="PTC28_001124"
     CDS             683..1606
                     /locus_tag="PTC28_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716420.1"
                     /translation="MSDIIPFPKLKEKLIYDITEAFDKERYEDAYDYFIAYERHFELT
                     SELALLKCDILWQLGAYLELKEEANILMMQGFPPYDTFIVYYIKSLYALEQYKAAVEM
                     VDQVLDDVVAHETRMTLLPIKNQAQSKLDERQDYMLHRLQRFTELSHYDQTQLVLTLI
                     DDRVYQYSETIAYLLVHESIVSSVQSLMLEYLRFAGYNQGITIEKDFRQIQVIPAELV
                     GIEQTAFKDRLLPAVIDALEVEIPSLVQEAYILLNTNNIALYPVNILDYGTVEMWRDA
                     YVAYFHQLMGKEVNVDSLYVEIFKLIKSLNT"
     gene            1694..3010
                     /locus_tag="PTC28_001125"
     CDS             1694..3010
                     /locus_tag="PTC28_001125"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HDK5716421.1"
                     /translation="MTATWEKKEGNEGLLQVSVPAEEVDKALDQAFKKVVKQLNVPGF
                     RKGKVPRQIFEQRFGVEALYQDAVDILLPKAYSEAVQETGINPVDQPEIEVTQIEKGQ
                     PFTFDATVIVEPEVQLGDYKGLEIEKQNTEVTEDEFNKAVEQRLDAMTDMVVKEDGQV
                     EEGDTVNLDFDGYVDGEQFEGGQAEGYDLEIGSGMFIPGFEEQLVGLKVGEEKEVEVT
                     FPEEYHAEELAGKPAVFKTKINEIKAKEVPELDDELASELDSNANNVEEFKANLRQQL
                     EEQKKTDAENAQKEEAITLATDNATIDIPEAMVRTEQDRMMSEFAQRIQQQGLDLNTY
                     FQISGQSEDDLREQMKEDAELRVKTNLTLAAIADAENIEVTDEDVDKELETMSEQFNI
                     SVEDIKKTLGNTDLVKNDVRVKKVINLLVDEAKLVESTSEDNKEEA"
     gene            3583..4845
                     /gene="clpX"
                     /locus_tag="PTC28_001126"
     CDS             3583..4845
                     /gene="clpX"
                     /locus_tag="PTC28_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HDK5716422.1"
                     /translation="MFKFNDDEENLKCSFCGKDQDQVKKLVAGSGVYICNECIELCAE
                     IVEEELNQQQAEELTELPTPKEIMDQLNSYVIGQEKAKKSLAVAVYNHYKRVQQLGPK
                     DDDVELQKSNVALIGPTGSGKTLLAQTLARTLNVPFAIADATSLTEAGYVGEDVENIL
                     LRLIQAADFDIDKAEKGIIYVDEIDKIARKSENTSITRDVSGEGVQQALLKILEGTTA
                     SVPPQGGRKHPNQEFIQIDTTNILFILGGAFDGINEVIKRRLGEKVIGFASNEASNFD
                     EASLLEQIRPEDLQTYGLIPEFIGRVPIVANLETLDVEALKNILTQPKNALVKQYTKM
                     LELDDVALEFTDEALAAISEKAIERKTGARGLRSIIEEALIDIMYDIPSTENVAKVVI
                     TKETIVNETEPELYDAEGNLVNTTKTSA"
     gene            5082..5678
                     /locus_tag="PTC28_001127"
     CDS             5082..5678
                     /locus_tag="PTC28_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HDK5716423.1"
                     /translation="MNINPNEVDILISAVKPEQYPELDLPEVALSGRSNVGKSTFINS
                     MIGRKNMARTSQQPGKTQTLNFFNIDNQLIFVDVPGYGYAKVSKKQREAFGKMIETYI
                     TTREALKLVIQLVDLRHPPTEDDVLMYDFLKYYDIPTLIIATKEDKIPKGKVQKHIKI
                     IKEKLELESGDQIISYSSIEKKKQDQIWAAISAFIAEE"
     gene            5833..7173
                     /locus_tag="PTC28_001128"
     CDS             5833..7173
                     /locus_tag="PTC28_001128"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HDK5716424.1"
                     /translation="MYLIAVSVNHRTADVACREKLSFQEENLTHVHEALFETKSILEN
                     VILSTCNRTEVYAVVDQIHTGRYYIQRFLARQFNFELDDIKAMSEVKTEDEAIEHLFR
                     VTAGLDSIVLGETQILGQMRDAFFTAQAAGTTGTIFNELFKQAITFSKKAHHETDIAN
                     NTISVSYGAVELAKKMFGKMNKKQALVIGAGEMAELAVLNLKGAGVRHVTVINRTLSR
                     AQALADQHGVQVGEWASLGEAIVSADIVISSTSAEQFIITKEMLEMCQSVAKSSQKVM
                     IDIAVPRDIEPVDVSHSELFIYDVDDLKGLVDANLRERQLAAEQIASRIPTEIDKHNE
                     WVRMLGVIPVIRALREKAMQIQQDTMDSISRKLPNMSERERKVISKHTKSIINQMLKD
                     PIKQAKEISDDKHADAKLALFQEIFDLEVEADYKTQAIKKKKSVLKERLLSIET"
     gene            7188..8024
                     /gene="ccsA"
                     /locus_tag="PTC28_001129"
     CDS             7188..8024
                     /gene="ccsA"
                     /locus_tag="PTC28_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HDK5716425.1"
                     /translation="MEEAFFIRFHEVILLIYLVSMVGLIIDVFQKNYRLQNIGFYALG
                     IVWFCQTISLTMFIIWQKQLPLTSLIESFYVLTWLILTITFVMSVLRQSEFMIAFLNV
                     IGFVFMTIHTFHPRQFKLDGARLTALNELLFFHISLALLSYVVFAVAFVNAIIYLIQY
                     RNLKEKRFTQNFFRMSSIATLEKLVFYSSLIGVIFMFISLVLGIQWGMVSIGYDIFLD
                     LKVISSIIIFIAYSIFITLRLTRRFKQSFLMNLNIMLFLCCMINLVVVTQLSTFHQWT
                     GV"
     gene            8050..8979
                     /gene="hemC"
                     /locus_tag="PTC28_001130"
     CDS             8050..8979
                     /gene="hemC"
                     /locus_tag="PTC28_001130"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HDK5716426.1"
                     /translation="MRKLIVGSRRSQLALTQSQQFIDRLKEVDPTLDIEIKEIVTKGD
                     QIVDRQLSKVGGKGLFVKEIQNELFSRDIDMAIHSLKDVPSELPEGLTLGCIPDRENP
                     FDAFISKNHIPLDELPDGSIIGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLKKLETE
                     DYDAIILAAAGLKRMGWSDDIVTTYLDEDLLVPAIGQGALGIECRADDDELLALLAKV
                     HNEDVAACVTAERTFLKEMNGSCQVPIGGYATRKNDTEIQFTGLIMSPDGKQRFEYTF
                     SGQDPIQVGSEVSRVLKSQGADKIIQALNEKEV"
     gene            8983..9660
                     /locus_tag="PTC28_001131"
     CDS             8983..9660
                     /locus_tag="PTC28_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HDK5716427.1"
                     /translation="MKPIIVMTQTKRYDDQRAEIVHLPFVTTEPLPFDQSVLGRHYDW
                     LVFTSQNAVTHFQPYLKLLNFNKLAVIGEKTKAFCESQGLRVDFFPADYSQEGFLDAF
                     PTQQGQHILIPSSQRARPLLYEVLQVRGFNVEKIDLYTSCFLLENVKEAKARIETGQV
                     DALTFASASAVKAFFHDDTSLNFDSYYAIGQQTARQIQDYGYSCSIANIQTLESMVTK
                     ILEERVQ"
     gene            9660..10637
                     /gene="hemB"
                     /locus_tag="PTC28_001132"
     CDS             9660..10637
                     /gene="hemB"
                     /locus_tag="PTC28_001132"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HDK5716428.1"
                     /translation="MQFDRHRRLRSSKVMRDMVRETHVRKEDLIYPIFVVEKDDVKAE
                     IKSLPGVYQISLNLLHEELKAAYDLGIRAIMFFGIPNEKDACGTGAFIEDGIIQKATR
                     LAKSMYNDLLILADTCLCEYTDHGHCGVIDTHTHDVDNDKTLPLLVQTAVSQVKAGAD
                     IIAPSNMMDGFVAAIRQGLDEAGYYHIPIMSYGIKYASSFFGPFRDAAESAPSFGDRK
                     TYQMDPANRLEALRELESDLNEGADMMIVKPALSYLDIIRDVRNNSNVPIIAYNVSGE
                     YSMTKAAALNGWIDEEKVVMEQMISMKRAGADMIITYFAKDICQYLDQQ"
     gene            10653..11939
                     /gene="hemL"
                     /locus_tag="PTC28_001133"
     CDS             10653..11939
                     /gene="hemL"
                     /locus_tag="PTC28_001133"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HDK5716429.1"
                     /translation="MRYNESIKAFEKAEQLMPGGVNSPVRAFKSVDTPAIFMSRGEGS
                     RIYDIDGNEYIDYVLSWGPLILGHRDSKVIEAIHDVVERGTSFGASTLEENRLAELVI
                     ERVPSIEKVRMVSSGTEATLDTLRLARGYTGKNKIIKFEGNYHGHSDSLLIKAGSGVA
                     TLGLPDSPGVPEGTAKNTITVPYNDLEAVKYAFEEFGDDIAAVIVEPVSGNMGVVPPI
                     NNFLQGLRDITKENDALLIFDEVMTGFRVGYNCAQGYFNVIPDLTCLGKVIGGGLPVG
                     AFGGRKEIMDHIAPSGDIYQAGTLSGNPLAMTSGYMTLSQLTPESYDYFNELGDMLEE
                     GLTEIFAKHQVPLTVNRAGSMIGFFLNEGPVTNFKEANQSDLELFGQLYRELAEQGIF
                     LPPSQFEGMFLSTAHTKEDIEKTLHAFDVALERLGK"
     gene            12197..13279
                     /locus_tag="PTC28_001134"
     CDS             12197..13279
                     /locus_tag="PTC28_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HDK5716430.1"
                     /translation="MAQNKMFNNLLVLVIAILFGWLLFALHIMLPWMFGPILASIFVV
                     KVLKRDVQWPLWLSELGLIMLGVQIGTSFTRSVTSDIKDDWLAIVLVSVLILLLALVV
                     SIGFRKIAHVNRETAILSVIPGALSQMIVMAEENKKADILVVSLTQTSRVIFVVLLVP
                     LISFFFKTDHSNRVTEANVQYLTDVLTIQHIVIIALGIAVVYILMKWIHFPTKMLMAP
                     IVVLVIWNFVTNLTFTLDAPIIAGAQIIYMIRVGIQIAHLTDQLKGRIAVAIAYQNVM
                     LIFGALAMVYLVQFINHASIDELFLGAAPGGMSQIVLVALDIGADVAMISSYHIFRIF
                     FILFLIAPLVSVYLKCLERNNKNDFN"
     gene            complement(13364..13912)
                     /locus_tag="PTC28_001135"
     CDS             complement(13364..13912)
                     /locus_tag="PTC28_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HDK5716431.1"
                     /translation="MNPCAFGTKDPLYLDYHDHCWGKPLYDSRALFELLALESQHAGL
                     SWLTILKKKEAYQQAFHHFDPHQIAQMRDEDIDALMAFPNIVHHRPKLEAIVAQAKGY
                     IQIEQDYDSFSSFLWSFVDGAPVDFKYQSVEERITVNDTAITLSKALKKYGFKFIGPV
                     TTFSFMEAAGLYNSHLVSCPNR"
     misc_binding    13971..14193
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            14232..16862
                     /locus_tag="PTC28_001136"
     CDS             14232..16862
                     /locus_tag="PTC28_001136"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HDK5716432.1"
                     /translation="MEMKPKYNPQEVEAGRYQKWLDQELFKPSDHSDKPTYTIVIPPP
                     NVTGKLHLGHAWDTTLQDILTRMKRMQGYETLYLPGMDHAGIATQAKVEAKMREEGIS
                     RHDIGREKFLEKAWEWKEEYASFIRQQWAKLGLGLDYSRERFTLDSGLSQAVRKVFVD
                     MYNKGLIYRGERIINWDPAARTALSDIEVVHEDVNGKFYHFKYPFADGEGYMEIATTR
                     PETMLGDTAIVVNPDDERYQDVIGKTVILPVVGRELPIIADDYVDKEFGSGAMKVTPA
                     HDPNDFEIGNRHNLERIVVMDEAGRMNAEAGKYEGMDRFECRKQLVKDLLEEGLVIKI
                     DDHVHSVGHSERSGAVVEPYLSTQWFVKMAPLAEQALNNQKTNGRIEFVPPRFEKTFN
                     RWMEEIRDWTISRQLWWGHQIPAWYHNETGELYVGEEAPVDIENWTQDEDVLDTWFSS
                     ALWPFSTLGWPNEDAADYQRFYPTNVLVTGYDIIFFWVARMIFQGLEFTGQKPFNDVL
                     LHGLVRAEDGRKMSKSLGNGVDPMDVIDQYGADSLRYFLATGSSPGHDLRYSTEKVES
                     VWNFINKIWNAARFSLMNIGDSFKFEDINLSSDLSVADQWILTRLNETIDTVTQLSDK
                     YEFGEVGRVLYNFIWDEFCDWYIEMSKIPMNGDDEVQKNVTRSVLSYALDRIMRLLHP
                     FMPFVTEHIWQNLPHEGESIVTSAWPTVDASLVFEESKDVMEQLVEIIKAVRQSRLEV
                     NTPLSKEIPIKIQAKNETIQQLLKTNQHYLERFCNPSTLEIETQIDIPDKAMTTVVAA
                     GEVILPIEGLIDMDKELERLEKDLQKWQKELDRVNKKLSNENFVNKAPEHVINEEKEK
                     QVKYQEKYDGVKARIEQLKA"
     gene            16874..18142
                     /locus_tag="PTC28_001137"
     CDS             16874..18142
                     /locus_tag="PTC28_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HDK5716433.1"
                     /translation="MNYLDSLYWIHERTKFGIKPGVKRMEWMLDKLGNPQQNIQAIHV
                     GGTNGKGSTVVYLREALLKNDYQVGTFTSPYIETFNERISLNGLPITNEDIVALVARV
                     KPVSEMMEEQTELGVATEFEIITTMMYLYFGELHPVDIVIVEAGLGVKNDSTNVIQPL
                     MSILTSIGLDHTDILGQTYLDIAKDKAAIIKPHTPIVYAVKNEEALKYFRDIAERLDA
                     KALEFDRDIFIKSEDDEFTYRYKDYELENLALHMVGEHQKENAALAITALIELYEQEK
                     IQLDFNKMIEGIEHAYWTGRIERVSKEPLIIIDGAHNKESVDALVDTIEKYYDVPKVD
                     VLFAAIEGKPIHHMLDAFQSIAKHIYVTGFDFPKALPKQTLYDEIEFGQKSMVDDYIS
                     FINNYDGDALLITGSLYFISEVKSKVDFNS"
     gene            18339..19055
                     /locus_tag="PTC28_001138"
     CDS             18339..19055
                     /locus_tag="PTC28_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HDK5716434.1"
                     /translation="MIVALFFVGSILMSFLLQFADHPSLSMRHCLQRSKCQTCQHELK
                     LLDLVPILSYCALKGRCRFCRQRIPISLFIGEVLGGCIIIYPLLLPVYIPLETFYVMA
                     LLLLTIAIVDIRTQLILHRFLCLISILLVALHPSFYIDVPHLLLWVTTFLIGCIQQNY
                     VGMGDIKLFLIIIFFFPVPFLLFFLELIFPIGCILLPISFMFNWIHQRRVPLAPAIFT
                     AFVTVSTIYPQLISFYGGFL"
     gene            19052..19735
                     /gene="radC"
                     /locus_tag="PTC28_001139"
     CDS             19052..19735
                     /gene="radC"
                     /locus_tag="PTC28_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HDK5716435.1"
                     /translation="MTRIQDLSSNEKPKERLIQFGSQALSNTELLAIIINTGSKGRSS
                     IQVASHILAQCQSLTALRKMSLVELEKFVGIGRNKATTLLAVFELSRRLAEDKKQYLS
                     DPIHSPSQIAERYYAKFKDYDQEHFVLLILNTKNQIVHEQTLFIGTLNSAIIHPREVF
                     KTALKWSANAIIVIHNHPSGDATPSEADIETTKRLVACGEAMGIELLDHIVIGEESYV
                     SIMSETNEA"
     gene            19725..19982
                     /locus_tag="PTC28_001140"
     CDS             19725..19982
                     /locus_tag="PTC28_001140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716436.1"
                     /translation="MKRKNRKGRGMKILALLHHQIVVLIDFRFFDIEALKVLKRLRDF
                     LLKWEPSNANYEIQIANQYDSFFKYSCSNPLYEALSSRHQI"
     gene            complement(19973..20128)
                     /locus_tag="PTC28_001141"
     CDS             complement(19973..20128)
                     /locus_tag="PTC28_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716437.1"
                     /translation="MNIIALFIMILLAVVLFRISVSIIGFLIRLGLMILVVYLGYQLF
                     LWFVSYI"
     gene            20298..20774
                     /locus_tag="PTC28_001142"
     CDS             20298..20774
                     /locus_tag="PTC28_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4930 family protein"
                     /protein_id="HDK5716438.1"
                     /translation="MRIIKSLVKLFMMIVLLIALVFAVLKFVPNFKNEPWNPVGNEEV
                     YQVTDDEGYLVPLNGRRYIQSENDIFRNIPKSQMRNVFNWIDKYEFMQVNEMTRMGYD
                     QEFLIAERDTQFILYRFGDDAMRVYTTEHDLYYDLNQLGASIQMKPLSAYQQADDD"
     gene            20860..21000
                     /locus_tag="PTC28_001143"
     CDS             20860..21000
                     /locus_tag="PTC28_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716439.1"
                     /translation="MSDNHQAQQSNEQLKAQNLFAKWRKDETLYKEDEEKSHAQQSEE
                     SS"
BASE COUNT         6972 a         3336 c         4386 g         6374 t
ORIGIN      
        1 tgactttacc attattcatt tcttttgtta cgatataaaa aacgaataaa aggagctcac
       61 aatgtcaaaa tttgatgaac aaattactgt agtcccacga cgtttgcttt ttgaagaaga
      121 ggcgctcgca ttcaatgggt ttttagatca atctgaagag aagggtcaaa aaatttatga
      181 aaagctttct caatatgaag tgaaaagacg tggtgatatg gaagaagatc ctagcttcaa
      241 acaattgatt agttattgtt taattgaaaa tgagcatgat gaattactcg tctatgagcg
      301 attatcaggt ggtggcgagg cacgacttca cggcaatgcg tctatcggtg taggcggaca
      361 catgaatgat gttcctgaag cgcaccatat tgatgaagtc attaaaacaa atgcaagtcg
      421 agaacttgaa gaggaaatcg gtgttaaaat taacaatcaa acaccgcttg aattcatagg
      481 ctttattaat gatgatcata atgaagtggg tcaagttcat atcggtgtcg tgtttaaagt
      541 gaaggttaag caacaagatg tcgaagtgcg tgaaacggat actttaaaga ttcagtggca
      601 accattaagc caaattagtg acacgagcgc attcgaatcg tggagcgcgt taatattaga
      661 gcagttgaaa taggtgaatg gcatgtctga tatcattcca tttcctaagc ttaaagaaaa
      721 gttaatatat gatattacag aggcattcga caaggaacgt tatgaagacg cttatgatta
      781 tttcattgcg tatgaacgtc actttgaatt gacatctgaa cttgcgcttt taaaatgtga
      841 tatattgtgg caacttggag cttaccttga attaaaagaa gaggcgaaca ttttaatgat
      901 gcaaggtttt ccgccatatg atacattcat cgtgtattac attaaaagtc tgtatgcatt
      961 agaacaatat aaagcggcag ttgaaatggt ggaccaggtt cttgatgatg tcgttgcaca
     1021 tgaaacgcgt atgactttat tacctattaa aaatcaagca caatccaaac tggacgaacg
     1081 ccaagattat atgttgcatc gattacaacg gtttactgag ctgagtcatt atgatcaaac
     1141 gcaattagta ctcacattaa ttgatgatcg tgtctatcag tacagtgaaa cgattgctta
     1201 tttgttagtt catgagtcaa tcgtttcaag tgttcaaagt ttgatgttag aatatttacg
     1261 ttttgctgga tacaatcaag gcatcaccat agagaaagat tttcgtcaaa ttcaagtgat
     1321 acccgctgaa cttgtaggaa ttgaacaaac agcctttaaa gatcgattgt tgcctgcagt
     1381 gattgatgct ttagaagtgg agataccttc acttgttcaa gaagcctata ttttacttaa
     1441 tacaaataat attgcacttt atcctgtaaa tatcctagac tatggaactg tagagatgtg
     1501 gcgcgatgct tatgttgcat atttccatca gttaatgggg aaggaagtca atgtggattc
     1561 attatatgta gagatattta aactcataaa atcgttaaat acataggtct cattatttca
     1621 aagaaggtca acctatgtta taataaagaa gttgaaaaat tttaaaaatg ataaatcatg
     1681 gaggttttta tacatgacag caacttggga aaaaaaagaa ggtaacgaag gattattaca
     1741 agtatccgta cctgcagaag aagtagataa agcattagat caagctttca aaaaagtagt
     1801 caaacaactt aacgtacctg gtttccgtaa agggaaagta cctcgtcaaa ttttcgaaca
     1861 acgttttggt gtagaagctt tatatcaaga tgcagtagac atcttattac caaaagcata
     1921 cagtgaagct gtacaagaaa caggtattaa tccagttgat caacctgaaa ttgaagtaac
     1981 acaaatcgaa aaaggccaac cattcacttt tgatgcaact gtaatcgttg aacctgaagt
     2041 acaattaggt gactacaaag gcttagaaat cgaaaaacaa aacactgaag tgactgaaga
     2101 cgaattcaac aaagcagtag aacaacgtct tgacgccatg actgatatgg tcgttaaaga
     2161 agacggtcaa gttgaagaag gcgacacagt taacttagac ttcgatggct atgttgatgg
     2221 tgagcaattc gaaggtggtc aagctgaagg atatgacttg gaaatcggtt caggtatgtt
     2281 catcccaggt tttgaagagc aacttgtagg cttaaaagtt ggggaagaaa aagaagttga
     2341 agtgacattc ccagaagaat accatgcaga agaattagct ggaaaacctg ctgtatttaa
     2401 aacaaaaatt aacgaaatca aagcaaaaga agtaccagaa ttagatgatg agcttgcgag
     2461 tgaattagat tctaatgcaa acaatgtaga ggaattcaaa gcaaacttac gtcaacaact
     2521 tgaagagcaa aagaaaactg acgctgaaaa tgcgcaaaaa gaagaagcga ttactttagc
     2581 aactgacaat gcgacaatcg atattccaga agctatggta cgtacagaac aagatcgcat
     2641 gatgagcgaa tttgcacaac gtattcaaca acaaggttta gacttaaaca cttacttcca
     2701 gatttcaggt caatcagaag atgatttacg tgaacaaatg aaagaagatg ctgagttacg
     2761 tgtgaaaaca aacttaacat tagctgccat tgcagatgca gaaaatatcg aagtgactga
     2821 tgaagatgtt gacaaagagc ttgaaacaat gagcgaacaa ttcaacatct ctgttgaaga
     2881 tattaagaaa acacttggca acactgatct tgttaaaaat gatgttcgtg tgaaaaaagt
     2941 tattaactta ttagtagacg aagcgaaatt agttgaaagc acttcagaag ataacaaaga
     3001 agaagcataa gcacgcatat cttattgatg cgtcgtattg aaaactttca ttacaaattt
     3061 gaatgataaa atttaatgaa ggttaatcag tgggaccgca catcaacttc aggtgatgtg
     3121 cggtcccact aacacaactc tcaatgaacc gtttcaacaa attttaatat gatgtgaaat
     3181 caaccggggt gggttgttgt actcaaatga tgccatttga caacaaccgc actccgctta
     3241 gtatttatga caacatctgt tcaaacagtt gcgttaatga attttgcaaa tgatttgatt
     3301 tttatgtcgc tagcacttag tatattaacg gcaagcttgg ggaatttcat tcagcaactt
     3361 tgagtgtatt ttgttggatg aagcgttggt atgaaacttt atgaagacac tacgaataaa
     3421 aatagatgag aaacagaagt tgaggatgac ttttactggg gccacaatat cacacatctg
     3481 ttgtgtttta ttgtgcaaaa tgcaaaaaac ttgaaatggt ctatatttgc gtaatagaat
     3541 gctttctagt atagtcgtaa aagaacaggg gtgtaataaa gtatgtttaa attcaatgat
     3601 gatgaagaaa acttaaaatg ttctttctgt ggtaaagatc aagaccaagt taaaaaattg
     3661 gtagcaggta gtggtgttta tatttgtaac gaatgtattg agctatgtgc tgaaatcgtt
     3721 gaagaagaat taaatcaaca acaagcagaa gaactcactg aattaccaac accaaaagaa
     3781 attatggatc aattaaacag ctatgttatc ggccaagaaa aagcgaagaa atcattggca
     3841 gttgctgtat acaatcacta caaacgtgtt caacaacttg ggcctaaaga tgatgacgtt
     3901 gaattacaaa aaagtaatgt cgctttaatt gggccgacag gtagtggtaa aacattactc
     3961 gcacaaacat tggcacgtac gttaaatgtg ccgtttgcca ttgccgatgc aactagcctt
     4021 acagaagcag gttatgtggg cgaagacgtt gaaaacattt tattacgttt aatccaagct
     4081 gctgattttg atattgataa agcagaaaaa gggattattt atgtcgatga gattgacaaa
     4141 attgcacgta aatcagaaaa cacatccatc acacgtgatg tttcaggtga aggtgtgcaa
     4201 caagcattgc ttaaaatttt agaaggtaca acagctagtg tgccgcctca aggtggacgt
     4261 aaacacccta accaagaatt tattcaaatt gatacaacaa atattttatt tattcttggc
     4321 ggtgcgtttg acggtataaa tgaagtgatt aaacgtcgtc ttggtgaaaa agtaatcggt
     4381 tttgcgagca atgaagcttc taatttcgat gaagcaagtt tattagagca aatccgtcca
     4441 gaagacctac aaacttatgg cttaattcct gagtttatcg gacgtgtacc aatcgttgca
     4501 aaccttgaaa cattagatgt tgaagcgttg aaaaacattt taacacaacc taaaaatgcg
     4561 ttggttaaac agtacactaa aatgcttgaa ttagatgatg tagctttaga atttactgat
     4621 gaagcattag ctgcaattag tgaaaaagca atcgaaagaa aaacaggagc acgtggttta
     4681 cgctcgatta ttgaggaagc attgattgat attatgtatg atattccttc tacagaaaac
     4741 gttgctaaag ttgtcattac aaaagaaaca attgtaaatg agacagagcc tgaactgtac
     4801 gatgcggaag gtaaccttgt gaatacaaca aaaacatctg cttaaaatca tgtttcagta
     4861 atcgaatgga taagtatgct taattttaaa aaggctgggt ttcataatca ggtcagatta
     4921 tggctcggct tttttatttc gctttagtat aaatatccaa catgtaaaaa tataaataat
     4981 cattatttcg ataaagagaa accgtacatt tgttgaaaag ctttgagcaa ttaaggtaat
     5041 ctaaaaagag tatgatgata cataaacgag gtgtaaaact gatgaatatc aacccaaatg
     5101 aagtagacat tctaattagt gctgttaaac cagagcaata cccagagtta gatttgcctg
     5161 aagttgcatt aagtggtcgc tcaaatgttg gaaaatcaac atttattaac agtatgattg
     5221 ggcgaaaaaa tatggcgaga acgtctcaac agcccggcaa aacgcaaact ttaaactttt
     5281 ttaatattga taaccaattg atttttgtcg atgttccagg ttatggttat gcgaaggtaa
     5341 gtaaaaagca acgtgaagct tttggtaaaa tgatcgaaac ttatattaca acacgagaag
     5401 cattaaaact cgtgattcaa ttagtcgatt tacgccatcc gccaactgaa gatgatgtgt
     5461 taatgtatga ctttttgaag tattacgaca ttccgacact cattatcgca acgaaagaag
     5521 ataaaatccc taaaggtaaa gtgcaaaagc atattaaaat cattaaagaa aaattggagt
     5581 tagaatccgg cgatcaaatt atcagttact catcaattga gaaaaagaaa caagatcaaa
     5641 tctgggcagc cattagtgcg ttcattgctg aagaataacc tattatcaac agatgaaaat
     5701 catgcacgac tacaattatg acaaaaattt ggaaggatga ttaaaaatct taacatgatt
     5761 atgcattttt aattagaatg actctaatct gtgttataat gtagtcattg tagaatatat
     5821 gggggcataa gcatgtactt aatagcagtt agtgtgaatc atcgaacagc tgatgtagca
     5881 tgtcgtgaaa aactttcatt tcaagaagaa aatttgacac acgtacatga agcgttgttc
     5941 gagacaaaat ctattttaga aaacgtgatt ttatcaacgt gtaaccgtac tgaagtgtat
     6001 gcggtagttg accaaattca tacgggacgt tactatattc aaagattttt ggcgcgacaa
     6061 tttaattttg aattagatga tatcaaggcg atgtctgaag tgaaaaccga agacgaagca
     6121 attgaacatc tattcagagt tacagcaggc ttagactcaa tcgtattagg tgaaacacaa
     6181 attttaggtc aaatgagaga tgcgtttttc acagcacaag cagcaggaac aacaggtact
     6241 atttttaatg aactgttcaa acaagcaatc acatttagta aaaaagcaca tcatgaaaca
     6301 gatattgcta ataatacaat tagtgtgtct tacggtgcgg ttgaacttgc gaaaaaaatg
     6361 ttcggtaaaa tgaataaaaa acaagcatta gtcattggtg cgggcgaaat ggcagaatta
     6421 gctgttttaa acttaaaagg tgctggcgtg cgtcacgtta cagtcattaa ccgtacatta
     6481 tcacgcgcac aagcattagc agatcaacat ggtgtacaag ttggagagtg ggcatcacta
     6541 ggggaagcca ttgtttcagc ggatatcgtg atcagttcaa caagtgcaga acaatttatc
     6601 attacaaaag agatgttaga aatgtgtcaa agtgttgcaa aatcatctca aaaagtcatg
     6661 attgatattg ctgtaccaag agatattgaa cctgtcgacg tttcacattc agagttgttt
     6721 atttatgacg tagatgattt aaaaggtctc gttgatgcca acttgcgtga acgtcaactt
     6781 gcagcagaac aaattgcatc acgtattcca acagaaattg ataaacataa tgaatgggtg
     6841 cgtatgcttg gtgtcattcc ggtcattcgt gcgttacgtg aaaaagcaat gcaaatccaa
     6901 caagatacga tggatagtat tagtcgaaaa ttaccaaata tgtcagagcg cgaacgaaaa
     6961 gtgatttcta agcatacgaa gagcatcatt aatcaaatgc taaaagatcc gatcaaacaa
     7021 gcgaaagaga ttagtgatga taagcatgcg gatgcgaagt tagcactatt ccaagaaatt
     7081 tttgatttag aagttgaagc agattataaa acacaagcga ttaaaaagaa aaaatctgtg
     7141 ttgaaagaaa gattattaag tatagaaact taaagaacgg tgatgctatg gaagaagcgt
     7201 ttttcatacg ttttcatgaa gtcattttat tgatttattt agtcagtatg gtgggtttga
     7261 taatagatgt atttcaaaag aattatcgtc tacaaaatat agggttctat gctttaggga
     7321 ttgtttggtt ttgtcaaaca atctctttaa ctatgtttat tatatggcaa aagcaactcc
     7381 ctttaacctc tttaatcgag agtttttacg tattaacgtg gttgattttg acgattactt
     7441 ttgtgatgtc cgtgttgcgt cagtctgagt ttatgatcgc ctttttgaat gtgattgggt
     7501 ttgtcttcat gacgattcac acgttccacc cgcgacaatt taaattggac ggtgcacgac
     7561 tcacagcttt gaatgaatta ctatttttcc acatttcact cgcattgttg agttatgtgg
     7621 ttttcgcagt tgcgtttgta aatgcgatta tttatttaat acaatatcga aatttaaaag
     7681 aaaagcgatt tacgcaaaat ttctttagaa tgagcagtat cgcaacactt gaaaagttag
     7741 tgttttacag ttctttgatt ggtgtcatat ttatgttcat tagtctcgtg ctaggaattc
     7801 aatggggtat ggtatcgatt ggctatgata tctttttaga cttgaaagtg atctcgtcaa
     7861 ttattatttt tattgcctat tctattttta ttacattacg attgacgcgt cgttttaaac
     7921 agtcattttt aatgaattta aatatcatgt tatttttatg ctgtatgatc aatttagttg
     7981 tggtgactca attatcaaca tttcaccaat ggaccggagt ttaaattatt ttaattggag
     8041 gaaagcacta tgcgtaaact tatcgtcggc tcaagaagaa gtcagctcgc attgactcaa
     8101 agccaacaat ttattgatcg tttaaaagaa gttgatccta ctttagatat cgaaattaaa
     8161 gaaattgtaa caaaagggga tcaaattgtg gatcgtcaat tatctaaagt cggtggtaaa
     8221 gggttattcg tgaaagaaat acaaaacgaa ctctttagcc gagacatcga tatggccatt
     8281 cattcattaa aagacgttcc aagcgaatta cctgaaggcc tcactttagg gtgtattcca
     8341 gaccgtgaaa atccatttga tgctttcatt tcaaaaaatc atattccgtt ggacgaactt
     8401 cctgatggta gtattatcgg aacaagttca ttaagacgtg gtgcacagat tttagcgaag
     8461 tatccgaacc tagaaatcaa atggataaga gggaatattg acacacgttt gaaaaagcta
     8521 gaaacagaag attacgatgc gattatttta gcggcagcag gtttgaaacg catgggttgg
     8581 tctgatgaca tagtgacaac atatttagat gaagacttac tcgtaccggc tattggccaa
     8641 ggtgcacttg gtatcgaatg tcgtgcagat gatgatgaat tgttagcatt acttgcaaaa
     8701 gtacataatg aagacgtggc ggcatgtgtc actgcagagc gcacgttttt aaaagaaatg
     8761 aatgggagtt gtcaagtccc tatcgggggc tatgcaaccc gtaaaaatga tacagagatt
     8821 caatttacgg gtttgattat gtctccagat ggtaaacaaa gatttgagta cacattttca
     8881 ggtcaagatc caatacaagt cggtagcgaa gtgagtcgtg ttcttaaatc tcaaggtgcg
     8941 gataagatta ttcaagcttt aaatgagaaa gaggtgtaaa tgatgaagcc tattatagtg
     9001 atgacccaaa ccaagcgtta tgatgatcag cgcgctgaaa tcgttcatct tccatttgtg
     9061 acgactgaac cacttccttt tgatcaatca gtgctaggtc gtcactatga ttggcttgtt
     9121 tttacatctc aaaatgccgt tacgcatttt caaccttatt taaagttgtt aaattttaat
     9181 aaattagcgg tcattggcga gaaaacgaaa gcattttgtg aatcacaagg attgcgagtg
     9241 gatttcttcc cagcagatta ctcacaagaa ggatttctcg atgcattccc cacacaacaa
     9301 gggcagcata ttttgattcc atccagtcaa cgcgcacgcc cattgctgta tgaagtgttg
     9361 caagtacgtg gtttcaatgt tgaaaaaatt gatttgtata cttcatgttt tttattggaa
     9421 aatgtgaaag aagccaaagc acgtatcgaa acaggtcaag tggatgcatt gacgtttgcg
     9481 agtgcttctg ctgtcaaggc gttttttcac gatgatacgt ctttaaattt cgactcgtat
     9541 tatgcaattg gtcaacaaac agcacgacag attcaagatt acggctattc atgttctatt
     9601 gctaacattc aaactttaga atcaatggtg acaaaaattt tagaagagag ggttcaataa
     9661 tgcaattcga tagacataga cgattacgtt catcaaaagt gatgcgtgat atggtaagag
     9721 aaacacatgt gagaaaagaa gatttgattt atcctatttt tgttgtagag aaagatgatg
     9781 tcaaagcaga aatcaaatca ttaccaggcg tatatcaaat cagcttaaac ctactacatg
     9841 aagaattgaa agcagcatat gatttaggga ttcgtgccat tatgttcttt ggaattccga
     9901 atgaaaaaga tgcatgtggg accggcgcat ttattgaaga tggcatcatt caaaaagcaa
     9961 cacgtttggc aaagtccatg tataatgatt tattaattct tgccgataca tgtttatgtg
    10021 aatatacgga tcatggtcat tgtggtgtga ttgacacaca tacacatgat gtcgataatg
    10081 ataaaacatt gcctttactt gttcaaacag ctgtttctca agtgaaggcg ggcgcagata
    10141 ttattgctcc tagtaatatg atggatggat ttgtggcagc aattcgccaa ggtttagatg
    10201 aagcaggata ctaccatatt ccaattatga gttacgggat taaatatgcg tcaagcttct
    10261 tcggcccatt ccgtgatgca gcggaatccg caccatcatt tggtgataga aaaacgtatc
    10321 aaatggaccc agcgaaccgt cttgaagcgt tacgagagtt agaatctgat cttaacgaag
    10381 gggcagatat gatgattgtc aagccagcgt taagttatct tgatattatt cgtgatgtac
    10441 gtaacaatag caacgtaccg attattgctt ataatgtgag tggtgagtac agcatgacaa
    10501 aagcagcagc attaaatggt tggatagatg aagaaaaagt tgtgatggag caaatgattt
    10561 ctatgaaacg cgcaggagca gatatgatca tcacttactt tgcgaaagac atttgtcaat
    10621 atttagatca acaataatag gaggcggcaa tattgcgtta taacgaatca attaaagcat
    10681 ttgaaaaagc agaacaactg atgcctggag gtgtgaacag ccctgtacgt gcatttaaat
    10741 cagtagacac accagcgatt tttatgtcac gtggtgaagg aagccgtatt tatgatattg
    10801 acggaaatga atatatcgac tatgtgctca gttggggacc gcttatttta ggtcatcgcg
    10861 attctaaagt aattgaagcg attcatgatg ttgtcgaacg tggtacaagc tttggcgcat
    10921 caacattaga agaaaaccgt ttggctgaat tagtgattga acgtgtgcct tccattgaaa
    10981 aagtgcggat ggtgtcatca ggaacagagg caacattaga tacattacga ttagcacgtg
    11041 gttatactgg caaaaataaa atcattaaat ttgaaggtaa ctatcacggt catagtgatt
    11101 cgttattaat taaagccggc tcaggagttg caacgttagg tttgccagat tcacctggtg
    11161 ttccagaagg tacggcgaaa aatacaatta cggtgcctta taacgatctt gaagcggtga
    11221 aatacgcatt tgaagagttt ggtgatgata tcgcagcggt cattgtagag ccagtctcag
    11281 gaaacatggg tgtcgtacca ccgattaaca acttcttaca agggttacgc gacattacga
    11341 aagaaaatga cgctttactt atttttgatg aagtgatgac aggttttcgc gtaggttaca
    11401 attgtgcaca aggctacttt aacgtcattc ctgatttaac gtgtctaggc aaagtgattg
    11461 gcggcggtct acctgttggt gctttcggtg ggcgtaaaga aattatggat catattgcac
    11521 caagcggcga tatttatcaa gcaggtacat tatcaggtaa tccgcttgca atgacgagtg
    11581 gttatatgac tttaagccaa ttaacaccag aaagctatga ttactttaat gaacttggtg
    11641 atatgttaga agaaggttta actgaaatct tcgccaaaca tcaagtgccg ttaacagtaa
    11701 atcgagcagg ttcgatgatt ggattcttct taaatgaagg gccagtcaca aactttaaag
    11761 aggcaaatca atctgatcta gaattatttg gtcaattgta tcgtgaactt gctgaacaag
    11821 gtattttctt gccaccatca caatttgaag gtatgttttt atcgacagca catacaaaag
    11881 aagacattga aaaaacattg catgctttcg atgttgcgtt agaacgtctc ggaaaataat
    11941 taaatacaac ttagatgagg tggggattga tgtggtcccg acctcttttt tctaatggtg
    12001 taaatttgaa gcctactatc atacgttttt tgtatgctag tgatcatcat ttatcgcaat
    12061 tctagcgtat aagttttacg aattgcatgt tcaatagaaa agcgtataat atatggttgc
    12121 tatgaatgga gtgaggtcat tccgcaactg tgttaacctt actcctcatt gtgataaaaa
    12181 attaggaggc gaggccatgg cacaaaataa aatgttcaat aatttacttg tactcgtcat
    12241 tgcgattttg tttggttggc tcttgtttgc attgcatatc atgttgccat ggatgttcgg
    12301 gcccattttg gcaagtattt ttgtcgtaaa agtactaaaa cgcgatgttc aatggccgct
    12361 ttggttgagt gaactgggtt taattatgct cggagttcaa atagggactt catttacaag
    12421 aagcgtgaca agtgatatta aagatgattg gctcgcaatt gttttagtga gtgtcctcat
    12481 attattgtta gcacttgtcg tctccattgg ttttagaaaa attgcacatg tcaatcgtga
    12541 aacggcaatt ttaagcgtca tcccaggggc gttgagtcag atgattgtaa tggctgaaga
    12601 aaataaaaaa gcagacatcc ttgtcgtgag tctgacacaa acgtcacgtg tcatttttgt
    12661 cgtgttatta gtgccattaa tatcattttt ctttaaaact gatcattcga atcgtgtcac
    12721 tgaagcaaat gtacaatatt taacagatgt tttaacgata caacatattg taatcattgc
    12781 tttagggatt gcagtcgttt atatactgat gaagtggatc catttcccta caaaaatgtt
    12841 gatggcacct attgttgtgt tagtcatatg gaattttgta acgaacctta cattcacact
    12901 tgatgcacct attattgcag gtgcgcaaat tatttatatg attcgtgtcg gtattcaaat
    12961 tgcgcattta accgatcaat taaaagggag aattgcagta gcaattgctt atcaaaatgt
    13021 catgctcatt tttggagcgt tagcaatggt ttatcttgta caattcatta accatgcttc
    13081 tattgatgaa ttattcctcg gcgcggcacc aggtgggatg agtcaaatcg tcttagtcgc
    13141 attggatatc ggagcggacg ttgcgatgat ttcaagttat catattttcc gtatattctt
    13201 tattttattt ttaatagcac cattagtcag tgtgtattta aaatgtttag agcgtaacaa
    13261 taaaaatgat ttcaattaag ggcttggata atgtcacgtc caagtccttt tatattgcgc
    13321 aatgttattg atgggtatgt gaaatagatt gatctaatat ggtttagcgg ttgggacatg
    13381 atactaaatg gctgttataa aggccggcag cttccataaa tgaaaatgta gtaacaggac
    13441 caataaattt aaaaccatat ttttttaatg cttttgataa tgttatagct gtatcattga
    13501 cggtgatgcg ttcttctaca gattgatatt taaaatcaac cggtgcccca tcgacaaatg
    13561 accataaaaa cgaactgaaa ctatcgtaat cttgttcaat ttgaatataa cctttcgctt
    13621 gtgcgacgat ggcttctaat tttggacgat gatgtacgat atttggaaat gccattaatg
    13681 catcaatatc ttcatcacgc atttgtgcaa tttgatgggg atcaaaatga tgaaatgctt
    13741 gttgataggc ttctttcttt tttaaaatcg ttaaccaaga aagtcccgca tgttgtgatt
    13801 ctagggctaa caactcaaat aaagcgcgtg aatcatagag tggtttgccc cagcagtgat
    13861 cgtgataatc gagataaagt ggatcttttg taccaaatgc acatgggttc acgttttcgt
    13921 tcctccttgt attgacttca ttgtcgtttc agtatactat aagaatgaaa ttaaaaatag
    13981 tgttagggaa gagtatgtta ttcgcttttt atagagagtg catgggagct ggaaatgcat
    14041 aaaagttata actgaaggta gcccgttttg aactttaatt gaactaagag taggttaaag
    14101 cgtgtcatga gcgttaatca taagagagca gtagtgtaga gatttgtttg cactattgaa
    14161 tataggtggt accgcggaac atccgtccta ttttggacag gtgttttttt attttaatgg
    14221 agggattttt aatggaaatg aaaccgaagt ataacccgca agaagttgaa gcgggtcgat
    14281 atcaaaaatg gctagaccaa gaacttttta aaccaagtga tcattcagat aaacctacat
    14341 atactattgt gattccacca ccgaatgtga caggaaagtt gcatttaggt cacgcgtggg
    14401 atacgacatt acaagacatt ttaacacgta tgaaacgtat gcaaggctat gaaacgcttt
    14461 acttaccagg catggaccat gcaggtatcg caactcaagc gaaagtagaa gcgaaaatga
    14521 gagaagaagg tatctctcgt catgatattg gtcgtgaaaa gttccttgaa aaggcatggg
    14581 aatggaaaga agaatatgcg tcatttattc gccaacaatg ggcaaagtta ggtctaggtt
    14641 tagactattc tagagagcgc tttacattgg attcaggatt aagtcaagct gtccgtaaag
    14701 tctttgttga tatgtataac aaaggattga tttatcgtgg cgaacgtatc attaactggg
    14761 atccagctgc gagaaccgca ctttctgata ttgaagttgt tcacgaagac gtcaatggca
    14821 agttttatca ttttaaatat ccgtttgctg acggtgaagg ctacatggaa attgctacga
    14881 cacgtcctga aacgatgtta ggagatacgg cgattgtcgt gaatccagat gatgaacgtt
    14941 accaagatgt tatcggtaag actgtgattt tacctgtcgt tggtcgtgaa ttaccaatta
    15001 ttgcagatga ctatgtcgat aaagaatttg gtagtggtgc aatgaaagta acacctgcac
    15061 atgacccgaa tgactttgaa atagggaatc gtcataattt agaacgtatt gttgtcatgg
    15121 atgaagcagg gcgcatgaat gctgaagcgg gaaaatatga aggcatggat cgttttgaat
    15181 gccgtaaaca gctcgttaaa gatttgttag aagaaggttt agttattaaa atcgatgacc
    15241 atgtccattc ggtaggccac tctgaacgtt cgggcgctgt tgttgagcca tacttatcaa
    15301 cacaatggtt cgttaaaatg gctccactag cagaacaagc tttaaataat caaaaaacaa
    15361 atggccgcat cgaatttgta ccgccgcgtt ttgaaaagac atttaatcgt tggatggaag
    15421 aaatccgtga ctggacaatt tcgagacagc tttggtgggg gcatcaaatt ccagcgtggt
    15481 accataatga aactggagag ctttatgtag gcgaagaagc acctgtagat attgagaatt
    15541 ggacacaaga tgaagacgtg ctagatacgt ggttctctag tgcattatgg ccgttttcaa
    15601 ctcttggttg gccaaatgaa gacgcagcag actatcaacg tttttaccca acgaatgtgt
    15661 tagtgacagg ctacgacatt attttcttct gggttgcgcg tatgattttc caaggtttag
    15721 aattcacagg tcaaaaacca tttaacgatg tattattaca tggtttagtc cgtgctgaag
    15781 atggtcgtaa aatgagtaaa tcattaggta atggtgtgga cccaatggac gtcattgatc
    15841 aatatggtgc cgacagctta cgttatttct tggcaacagg gtcttcacca ggtcacgatt
    15901 tacgttattc aacagaaaaa gtagagtctg tttggaactt tattaataaa atttggaatg
    15961 ccgcgcgttt tagtttgatg aatattggtg actcattcaa atttgaagat attaatttat
    16021 cgagcgattt atcagttgca gatcaatgga tattaacacg tttgaatgaa acgattgaca
    16081 ctgtcacaca gctgagcgac aagtatgaat ttggcgaagt gggacgcgta ttgtataatt
    16141 ttatttggga tgagttctgc gactggtaca ttgaaatgag taaaattcca atgaacggtg
    16201 acgatgaggt tcagaaaaac gttacacgct ctgtacttag ttatgcttta gatcgtatta
    16261 tgcgtctatt acatccattt atgccgtttg tcactgaaca catttggcaa aatttaccgc
    16321 atgaaggtga atctatcgtg acaagtgcat ggccaacagt ggatgcatcg ctcgtgtttg
    16381 aagaaagtaa agatgtgatg gaacaattag ttgaaatcat taaagcagta cgtcaatcgc
    16441 gtttagaagt gaatacacca ctatctaaag aaattccaat taaaattcaa gctaaaaatg
    16501 aaacgatcca acaattattg aagacgaatc aacattattt ggaacgtttc tgtaatccaa
    16561 gtacgcttga aatagaaaca caaatcgaca ttcctgataa agcgatgaca acagtcgttg
    16621 ctgctggtga agtcatttta cctattgaag gtttgattga tatggacaag gaattagaac
    16681 gtctagagaa agatttacaa aaatggcaaa aagagttaga tcgtgttaat aagaaattat
    16741 caaacgagaa ttttgtgaat aaagcacctg agcacgtcat taatgaagaa aaagaaaagc
    16801 aagtgaaata tcaagagaaa tatgatggtg tcaaggcgag aattgaacaa ttaaaagcgt
    16861 aggagtctta gttatgaatt atctagacag tttatattgg atacacgaaa gaacaaaatt
    16921 cggcattaaa ccaggtgtaa aacgtatgga atggatgctc gataaacttg gtaatccaca
    16981 acagaatatc caagctattc atgtcggtgg gacgaatggt aaaggttcta cggttgttta
    17041 tttacgtgaa gctttactca aaaatgatta tcaagtgggt acttttacgt ctccatatat
    17101 cgaaacattt aatgaacgaa tcagtttaaa tggtttacca attacaaacg aagatatagt
    17161 agcgctagtg gctcgtgtga aacctgtcag tgaaatgatg gaagaacaaa ctgagttagg
    17221 agttgcgacc gaatttgaga tcattacaac aatgatgtat ctctatttcg gcgagcttca
    17281 tccagttgat atcgttatcg ttgaggcagg tctaggtgtc aaaaatgatt ctacaaatgt
    17341 gatacagcca ttgatgagta ttttgacgag tatcggttta gatcatacgg acattctcgg
    17401 tcaaacgtat ctagacattg ctaaagataa agcggcaatt attaaaccgc atacgccaat
    17461 tgtttacgct gttaaaaatg aagaagcatt gaagtatttt agagatatcg ctgaacgatt
    17521 agatgcgaaa gctttagaat tcgatcgtga tatttttatc aaatcagaag acgatgaatt
    17581 tacatatcgt tataaagatt acgaattaga gaacttagca ttacacatgg tcggcgaaca
    17641 ccaaaaggaa aatgcagcac ttgcaattac tgcgttaatt gagttgtatg agcaagaaaa
    17701 aattcaatta gacttcaaca aaatgattga agggattgaa catgcgtatt ggacaggtcg
    17761 tattgaacgt gtctctaaag aaccgcttat cataattgac ggtgcacata ataaagaaag
    17821 tgttgacgca ttagtggaca caattgagaa gtattacgat gtaccgaaag tagacgtctt
    17881 atttgcagct attgagggga agccgattca tcatatgtta gatgctttcc aaagtatcgc
    17941 aaagcatatt tatgtgacag gatttgattt tccaaaagca cttcctaagc aaacgttata
    18001 tgatgaaatt gaatttggac aaaaatcaat ggtcgatgat tacatctcat ttataaacaa
    18061 ctacgatggt gatgcattgc tcattacagg tagtctttat ttcatcagtg aagtgaaatc
    18121 taaagttgac tttaattcat aaaaatcgaa ccactttgta tgtattccga aaaatcgaga
    18181 tacatataag gtggtttttt atcatatacg tttttttcga cttaaaaagt gttttttggc
    18241 gatttgactc ttcatatgga tgcgcatata ataagtgcat tcaatgaaat gttgctgtcg
    18301 tgaattaaag tttcgacggt gttgaggagg tgtctagaat aatcgtcgcc ttattttttg
    18361 taggcagtat tttaatgagt tttttactgc aattcgctga tcatccttca ttaagcatgc
    18421 gacattgctt acaaagatca aagtgtcaaa catgtcagca tgagttaaag ctgctcgatt
    18481 tagtacctat cctaagttac tgtgcgttaa agggaaggtg ccgtttttgt cgacaacgca
    18541 ttccaatatc cctttttata ggcgaagttt taggggggtg cattattatt tatccgctat
    18601 tactacctgt atacattccg cttgagacgt tttatgtcat ggcgttacta ttactcacaa
    18661 ttgcaattgt tgatatacgt acacagttga ttcttcacag attcctttgt ttaatatcca
    18721 ttttgttagt cgcacttcat ccgtctttct atatagatgt gccacacctg ttactttggg
    18781 ttactacttt tttgataggg tgcattcaac aaaattatgt gggtatgggc gatattaaat
    18841 tatttcttat catcattttc ttttttcctg taccgttttt actcttcttt ttagaactca
    18901 tttttccaat aggctgtata ctattaccga tttcatttat gtttaattgg atacaccaac
    18961 gccgagtacc acttgcgcct gctattttca ccgcatttgt taccgtttct acgatatacc
    19021 cacagttgat ttcattttat ggaggatttt tatgacacgc attcaagatt tatcatccaa
    19081 tgagaaacca aaagagcgcc taattcaatt tggtagtcag gcattatcga acacagaatt
    19141 acttgcaatt attatcaata ccgggagtaa aggacgttct agcatacaag ttgcttcaca
    19201 tattttagcg caatgtcagt cattaacagc gcttagaaaa atgtcattag ttgaattaga
    19261 aaagtttgtc ggaatagggc gtaataaggc gacaacgttg ctcgctgtat tcgaattgtc
    19321 acgacgttta gcagaggata aaaagcaata cctatctgat cctattcatt ctccgagcca
    19381 aattgcagaa cgctattatg caaaatttaa ggattatgat caagaacatt ttgttttact
    19441 catcttaaat acgaaaaatc aaattgttca tgaacaaacg ctttttattg gaacgttaaa
    19501 tagtgccatc atacatccta gagaagtgtt taaaacagct ttgaaatggt ctgctaatgc
    19561 gattattgtg attcataacc atccttcagg ggacgcaaca ccatcagaag cggacattga
    19621 aacgacaaaa cggttggttg catgtggaga ggcaatgggg attgagttac ttgatcatat
    19681 tgtgattggg gaagaatcgt atgtttcgat tatgagtgaa acaaatgaag cgtaaaaata
    19741 gaaaggggcg gggtatgaaa attttagcat tgcttcatca tcaaatagtc gttcttattg
    19801 atttccgttt ttttgatatt gaagcgctca aagtgttgaa acgcctgaga gattttctcc
    19861 taaaatggga gccatctaat gccaattatg aaattcaaat cgcaaatcaa tacgactcat
    19921 tttttaaata ttcatgctcc aatccccttt atgaagcgtt atcttctcgt catcaaatat
    19981 agctcacaaa ccataagaac aattgatagc caagatagac aactagtatc atcaagccga
    20041 gtctaattaa aaagccaatg attgaaacac tgattctaaa aagaactacg gcaagtaaaa
    20101 tcattataaa taatgcgata atgttcattc atgtcactcc ttcattgata ttgtagtatt
    20161 tttatgaaac aaacacatca ttctaaagtt atatttatca tgcttcggat ggatgtcttt
    20221 aaatatctta tttattataa tataacgtat aatgatggga gtagtgttga tgagagataa
    20281 ttttaaggag ggcattcatg cggataatta aaagtcttgt taaattattt atgatgattg
    20341 tattactcat cgccctcgtt tttgctgtat taaagtttgt accgaatttc aaaaatgaac
    20401 catggaatcc tgttggaaat gaagaagtgt accaagtgac tgatgatgaa gggtatctcg
    20461 taccattaaa tggacggcgc tatattcaaa gtgaaaacga catttttaga aatataccta
    20521 aaagtcagat gaggaatgta tttaactgga ttgataaata tgaatttatg caagtcaatg
    20581 aaatgacacg tatgggatat gatcaagaat ttttaattgc agaacgcgat acacagttta
    20641 ttttatatcg ttttggtgat gatgcgatgc gtgtctatac aacagagcat gatctttatt
    20701 atgaccttaa tcaacttggt gcatccattc aaatgaagcc tctaagtgcg taccaacaag
    20761 ctgacgatga ttaatcagat attgaggtgt gcagcttgag ataacgcttt tgataagtta
    20821 ggctatggat gagacaaatt tttgagaggt gattttgcga tgtctgacaa ccatcaagcg
    20881 caacaaagca atgagcagtt aaaagctcaa aacttatttg cgaaatggcg taaagatgaa
    20941 acgttgtata aagaagatga agaaaaatct catgcacaac aatcggaaga atcatcatag
    21001 gagttagatt gaagcgggat agaaggctta aggtgtaata gctatttcta tctcgtttta
    21061 attttatt
//
LOCUS       DANHPA010000039        21065 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.039, whole genome shotgun sequence.
ACCESSION   DANHPA010000039 DANHPA010000000
VERSION     DANHPA010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 21065)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21065)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21065
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.039"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(431..1027)
                     /gene="recR"
                     /locus_tag="PTC28_001144"
     CDS             complement(431..1027)
                     /gene="recR"
                     /locus_tag="PTC28_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009383386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HDK5716440.1"
                     /translation="MHYPQPISKLIDSFMKLPGIGPKTAQRLAFHVLDMKEDDVVQFA
                     KALVDVKRELTYCSVCGHITEQDPCYICEDKQRDRSMICVVEDDKDVIAMEKMKEYKG
                     LYHVLHGTISPMDGIGPEDINIPSLVERLKDEGVKELILAMNPNLEGESTAMYISRLV
                     KPLGIRVTRLAQGLSVGGDLEYADEVTLSRAISGRTEM"
     gene            complement(1029..1349)
                     /locus_tag="PTC28_001145"
     CDS             complement(1029..1349)
                     /locus_tag="PTC28_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009383384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HDK5716441.1"
                     /translation="MRGGGNMQQMMKQMQKMQKKMAEEQEKLKEEHVEGTAGGGMVKV
                     VVSGHKEVVDVIINEEVVDPEDVEMLQDLVLAATNEAMNKADALTAERLGKHTKGLNI
                     PGMM"
     gene            complement(1441..3144)
                     /gene="dnaX"
                     /locus_tag="PTC28_001146"
     CDS             complement(1441..3144)
                     /gene="dnaX"
                     /locus_tag="PTC28_001146"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HDK5716442.1"
                     /translation="MDYQALYRMFRPQSFEDVVGQEHVTKTLKNAIAKGKQSHAYIFS
                     GPRGTGKTSIAKIFAKAINCEVRDDGEPCNECASCKGITQGYHSDVIEIDAASNNGVD
                     EIRNIRDKVKYAPSESKYKVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTEPH
                     KIPPTIISRAQRFDFKAINANRIVDRLRYVAHQQQIEFDEAALTFIAKVSEGGMRDAL
                     SIMDQAIAFGDERLTLKDALDVTGSLDESDLNALFQDVVQGHVHEAFERYHQFVSEGK
                     EVNRLINDMIYFVRDTIMAKTTQLETEYDALMPFNLEVLYKMIDVINDTLVSIRFSVN
                     QNVHLEVLLVKLSEMVKEVNRTGEVVVNHAPTEQHDAMMRRMEALESELQTLKSQGFS
                     TATAPPKPPAAAKRRGSGSTYSIEQIAKVLDKANKEDIALIKERWADVIQYAKDRNQK
                     SLVSLLQNSEPVAASEDKVLIKFDEEIHCEILKKDEEKKRSIENVVKDMINKSVEVVG
                     VPADKWMQVRSDYISNRKRGNTQSNASEAKKPAEQQNDVVQTAKDLFGEEMVHLMDEE
                     T"
     gene            complement(3211..3744)
                     /locus_tag="PTC28_001147"
     CDS             complement(3211..3744)
                     /locus_tag="PTC28_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDK5716443.1"
                     /translation="MSIFLSTPTENDYEATYEMLANAFEDVPESDHQEHHLVKRLRLS
                     PNYRYELEVVAKTDEGDIIGHGMCSEVTIQNDDTTYTALALAPLAVVAEYRNKGIGRA
                     LVQALEERAFAENYTTIVVLGHADYYQKLGYEEAIRHHILAPFDVPSENYRVKFLWDT
                     LEDPPNGKVIYPEAFFE"
     gene            complement(3846..4115)
                     /gene="ffs"
                     /locus_tag="PTC28_001148"
     ncRNA           complement(3846..4115)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="PTC28_001148"
                     /product="signal recognition particle sRNA large type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01854"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01854"
     gene            complement(4201..4935)
                     /gene="treR"
                     /locus_tag="PTC28_001149"
     CDS             complement(4201..4935)
                     /gene="treR"
                     /locus_tag="PTC28_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose operon repressor"
                     /protein_id="HDK5716444.1"
                     /translation="MKNQNKFQYIYERLRIAILEGEYEYGEQLLSEHQLVKKYNVSRE
                     TVRKSLNMLVLDGMIQKIRGKGSVVIYQGVTEFPFADLKSFKEVQTQLGLHYETVVVR
                     FEKIKAADVPQVKKALEMTTDEELWHFIRYRQIEGITKIVDEDYVRANLFPELSEAVV
                     QNSLYDYIEKVKGYEISFSSKSITFEPFGELERAAFGDVTPQYSATVRGIVHLKDTTK
                     FQYNVSKHIATEFKFIDFSRRHSHLS"
     gene            complement(4957..6588)
                     /gene="treC"
                     /locus_tag="PTC28_001150"
     CDS             complement(4957..6588)
                     /gene="treC"
                     /locus_tag="PTC28_001150"
                     /EC_number="3.2.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-phosphotrehalase"
                     /protein_id="HDK5716445.1"
                     /translation="MVRQDWKKSVVYQIYPKSFNDTTGNGEGDLKGIIEKLDYLQFLG
                     VDYLWLTPIYDSPMNDNGYDIRDYYQVNAQFGDKDDLRTLIDEAHARGLKMMLDIVIN
                     HTSTEHEWFQQAQQSVDNPYRDYYFFRRSEDGPPTNWLSKFGGNAWQYDEQTDAYYLH
                     LFDVTQADLNWDNPEVRHALYEMINYWIDFGVDGFRFDVINLISKDTFEDSNEIGKEY
                     YTDGPRVHDYIHEMNRHTFGDRDMMTVGEMSSTSIDHCIQYTNPERQELSSVFNFHHL
                     KVDYRDGQKWTNQKFDLLQLKQILMEWQTKMYAGNGWNAIFWCNHDQPRVVSRFGSDA
                     TEALRQQSAKTLAIALHLLQGTPYIYQGEEIGMTDPHFQSIQQYRDVESLNAYREMRE
                     AGIDEAEILTILGQKSRDNSRTPMQWNDEAHAGFTTGTPWIEVANNYNTVNVEAAMAD
                     PESILYTYKKLIQLRHEHDIVTYGEVVPRYLDHPQLFVYERRYQGDTWLIIANMTSEK
                     VTLPEDLDRSGSVVLQNGIIEGNELEAYATIVVAR"
     gene            complement(6633..8069)
                     /gene="treP"
                     /locus_tag="PTC28_001151"
     CDS             complement(6633..8069)
                     /gene="treP"
                     /locus_tag="PTC28_001151"
                     /EC_number="2.7.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system trehalose-specific EIIBC component"
                     /protein_id="HDK5716446.1"
                     /translation="MAVKKKDVRDIIEAIGGEENIQSATHCVTRLRLVLKDDNQVDKE
                     KLSENPLVKGQFKADQQYQIVIGPGTVDEAYKVLMEETNTQAVSKEEAKAQAAKKGNP
                     LQRLIKLLGDIFIPILPAIVTAGLLLGVNNVLTMKGLGNAPSIIERFPQIADFANIIN
                     VIATTAFIFLPALVGWSAMRVFGGNPVLGIVLGLVLMHPQLLSQYDIGKVDEIPAWHI
                     FGLKIEQLNYQGQVLPVLLAAYVLAQIEKGLNKVVHDSIKLLVVGPVALLVTGFLAFL
                     FIGPLALWMGTGITSAVQFLFGNAGWFGGAVYGLLYAPLVITGLHHMFLAVDFQLMGS
                     ELGGTYLWPILALSNIAQGSAAFGAWFVYQRRQMNKEQGLAMTSGISGFLGVTEPAMF
                     GVNLPLKYPFFAAILTTMVTGAIVGGSGVLGSVGVGGLPAIISIKSQFWGVFGIATLI
                     SMVVPAVLTIIFAKLSREKTKIMVNDEQ"
     gene            complement(8384..8476)
                     /locus_tag="PTC28_001152"
     tRNA            complement(8384..8476)
                     /locus_tag="PTC28_001152"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8438..8440),aa:Ser,seq:tga)
     gene            complement(8543..10000)
                     /locus_tag="PTC28_001153"
     CDS             complement(8543..10000)
                     /locus_tag="PTC28_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HDK5716447.1"
                     /translation="MGEFKGFMKYDKQKLAEMPLETRIQHYEAYQSRFSQEDAQQQGA
                     RCMDCGTPFCQVGEMVERETVGCPLGNYIPEWNDLVYRGDFKTAYERLAETNNFPDFT
                     GYVCPAPCEASCVMKINRESVAIKGIERTIIDEAFEQGWVKPKTPSVRRNEKVAIIGS
                     GPAGLAAAEELNALGYQVVVYEKNAQPGGLLTYGIPNMKLDKEVVFRRIRLLEEAGIT
                     FHCNVEIGKDVSKNELDETYDAVVVCTGAEKPRDLPLEGRMGRGIHFAMDYLTEQTQL
                     LLNETDTQTISAQGKKVVVIGDGDTGADCVATALRDGCESIIQFNRKARKPERFEINY
                     SWPLAQPVLKKDYAHQEYEAKYGQEPRAYGIQTMRFDVDELGDVRGIYAQVQRDHADG
                     TIVGDDREIFIPADLVLLAIGFEGVKSPLAHALQLKVERQKIVADTKDYRTNQSKYFV
                     AGDARRGQSLVVWAIKEGREVAQSVHRYIAGKVFI"
     gene            complement(10013..14518)
                     /gene="gltB"
                     /locus_tag="PTC28_001154"
     CDS             complement(10013..14518)
                     /gene="gltB"
                     /locus_tag="PTC28_001154"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HDK5716448.1"
                     /translation="MSNNYLNSKIGLYDSREEHDACGIGFYANMNNERSHEIVEKSLE
                     MLRRLDHRGGIGADGITGDGAGIMTEVPYQYFSEVTDFDLPTEGDYAVGMLFANVMIS
                     DTKHAAVMASIFEGEGLRIIGDRQVPVDVTCLAPHVAETMPVIQQVFVVNESAQDFKR
                     ALYLARKQIEKYGESAQLDLYFTSLSTRTIVYKGWLRSDQIKSLYVDLQQPSYVSKFG
                     SVHSRFSTNTFPSWERAHPNRLLMHNGEINTIQGNVNWMRARQRRLIETIFGEAQHKV
                     HQILDESGSDSAIVDNALEFLSLAMSPEQAAMLLIPEPWLYNESNDPKVRAFYEFYSY
                     LMEPWDGPTMISFCDGDKLGALTDRNGLRPGRYTITKQNEIVFSSEVGVVDVDEADVV
                     FKGQLNPGKLLLVDFNQHKVIENHELKTAIAEQQPYLEWLETYQHKLDLEAVSYAGGP
                     VAVDHVLKMQQRFGYTKEELDKYLTELVTGGKDPIGAMGYDAPLAVLSERPESLFNYF
                     KQLFAQVTNPPIDAYREKIVTSELSYLGKEGNLLEPGPDVLKRVQLKHPVLTPAQLDV
                     IGQEGFTVAEFSTGYTGGLKEALDNLGEVVIKAVRQGAEIIVLNDSDVTEADQYAMPI
                     LLAVSHIHQLLIRENLRMQTSIVASSGETREVHHLACLVGYGANAVVPYLAQQTIAQL
                     TEHGRLDGVVADNVARYNAILSEGLIKVMAKMGISTVQSYQGAQIFEAVGLSEAVIND
                     YFTGTTSKLSGISIETLDAENKARQTIKGDTLDPGSTFQWRQQGQHHTFNPTTIRLLQ
                     HACRDNDYAQFKAFSKVANDQTSSHIRDLFAFKSQQAIDIAQVEPVEEIVKRFKTGAM
                     SYGSISQEAHQTLAEAMNQLGGKSNSGEGGEALSRYEPQADGRDFKSAIKQVASGRFG
                     VTSHYLQHAKEIQIKVAQGAKPGEGGQLPGSKVYPWIAEVRGSTPGIGLISPPPHHDI
                     YSIEDLAQLIHDLKNVNRDADITVKLVSKSGVGTIAAGVAKAFADKIVISGYDGGTGA
                     SPKTSIQHAGLPWELGLAETHQTLMMNDLRSRVRLETDGKLLTGKDVAYACMLGAEEF
                     GFATAPLVVLGCIMMRVCHKDTCPVGIATQNGDLRKLYTGKAQHVVNYMHFVAEELRE
                     IMAELGIRTVDELVGRTDLLKRSAVAYHHPKAREMKLENLLYQHVGPRTKEIEQRHGL
                     EHGFDLTTLLPASQAHIQAGSRFKGQFEVGNEQRNIGVITGSEITRAHGLNGLPTDTI
                     VAETHGHAGQSLGAWIPQGLTLHHTGDANDYVGKGLSGGKIVVNAPNVAREAEIIVGN
                     VCFYGATKGEAYINGRAGERFCIRNSGVHVVVEGVGDHGLEYMTGGRVVILGDVGKNF
                     GQGMSGGVCYAFPSDVEQFKTHNQLATLDFDVVEDEAEKAMLKGMLERHLAYTESQKA
                     AVILADFEAQLQQCVKVIPKDYKQMVQKIHYHQQQHASQDDALLAAFNDDQNIDEVAQ
                     AEPIAVY"
     gene            14641..15519
                     /locus_tag="PTC28_001155"
     CDS             14641..15519
                     /locus_tag="PTC28_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDK5716449.1"
                     /translation="MELKQLKYFVEVAKREHISEAALELNVAQSAISRHIHNLENELE
                     TSLFYRRGRNVFLTAEGKQLLEYAKQILEQVDLTLSQFQTQVQQQQSVYTIGYVDGSI
                     GQILPQVLQTIENELSLSLIPTLLDEQETLQALRAQEIDFALTTVTTTDPTFEIVPLV
                     EETYVLYGDLHAPMMNVPNPPLSHILKQPLYLLEPIPTDFKTYLITHADKPVRVLNQE
                     QFARFILRNQKGFVLAPTYVNLYSQNQQWKKISLSHTDFKKTLHLIYRRDLQKPLRDE
                     VIQIIMTHIQQRSVYH"
     gene            15532..16641
                     /locus_tag="PTC28_001156"
     CDS             15532..16641
                     /locus_tag="PTC28_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YibE/F family protein"
                     /protein_id="HDK5716450.1"
                     /translation="MKQLSKKINTIVIVVSIIVAICAIVFTRLNSSFYHIPLGEVTKI
                     ESHHQEKSVDEQHNQDVKYKDVLQVKLLNTKQQGDTLHVEHRYNASKTEEQAYQPGDK
                     VLLHKGKNQKDTYIIEKKRDTVLVTVISAFFIALLIVGQRIGLQSILSLVINALAILL
                     AISLYHAYPQLNLFLLMSLAVMIATILTLWLVIGWSMRTIVTIVSTLLGTFICIFIAW
                     SVIGLTHGQGIKYETMSFLTIQPRTVFLTSVMVGTLGAVMDVAITISSGMYEVLQRSP
                     HISMQRWVLAGRNIGRDIMGTMTNILLFSYLAGSLPMLLLYLKNGNTLTYSISMNWSL
                     EISRAITGGIGIVLTIPLTIFLMRIWLSLRGGATR"
     gene            16638..17411
                     /locus_tag="PTC28_001157"
     CDS             16638..17411
                     /locus_tag="PTC28_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YibE/F family protein"
                     /protein_id="HDK5716451.1"
                     /translation="MNAIVILGLILFILMLIFGGKTGLVSFLTLFLNFIILFITVLAI
                     VFGAPIYVVTFIFCIIVSMVNLFLLNRFNTKTLAAFIASTVTTLLMIVAVYLSVHWGH
                     LQGFTQEEQDETYIFSLNIGIDMEQFMIFTVLLAVIAAVIDLAITISSPVFELHETNP
                     SLSESELFHSGMRVGREILATSANTIYLALIGGSMTIVFWFFNLHYSFGHMLNAKLFA
                     QEVITIALGGIAIAVCIPITAMITAWLVKHRHQLPFHLD"
     gene            17460..19721
                     /locus_tag="PTC28_001158"
     CDS             17460..19721
                     /locus_tag="PTC28_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HDK5716452.1"
                     /translation="MTAIHIHGARQNNLKNIDVSIPKHQLTVVTGRSGSGKSSLVFNT
                     IAAESERLLNETYSSYIQHQLTQYEKPDVDHIENLPVAMVINQKRLGGNSRSTVGTIS
                     DIYASVRLLWSRIGTPFVGYSDVFSFNNPNGMCEHCQGLGYVEDIDLNELLDFDKSLN
                     EGAIRFPSFKPDSWRGKRYRYSGLFDNDKKLKDYTKEELDTFLYTEPTRLKNPPSEWP
                     KTAKFEGLIHRFRRSFLINDNFEKKRFLKDVERVVTKQTCPVCHGQRLNQKVLSCKIH
                     GLNIADFTALTIEETLPFLEQIDSDKATYIIEPLKAQLQALNDIGLNYLTLARETTTL
                     SGGESQRIKLIRHLNSPLTDLVYIIDEPSVGLHPADIEKINEIMLNIRDKGNTVIIVE
                     HDPDVIKIADHVIDIGPGAGKHGGQITFEGSYAQLKQSDTDTARALTRQHHLKQSAIR
                     DNQAWLHLEHLQHNNLQDVSVAIPKNAQTVVTGVAGSGKSSLIKGGFAKHEDAILIDQ
                     KGVHTSNRPNLLTYTGIFDDVREFFSKATGLKKSMFSYNSDGACPNCNGKGVLKTELA
                     FMPDFSQVCEVCGGTRYRPEVLEAKVDGYSIADVLALTVEEGLSLFQTHDAIAQTLSA
                     LQSTGLGYMTLGQSLDTLSGGEVQRLKLTRYMIEPVTEKIFIFDEPTTGLHEDDIPIL
                     QARFDQLIEEGHTVILIEHNITMMTRADWLIDVGPGAGNQGGRILYSGPPAGLKNVAE
                     SRTAPHLFGSLSE"
     gene            complement(19788..20108)
                     /locus_tag="PTC28_001159"
     CDS             complement(19788..20108)
                     /locus_tag="PTC28_001159"
                     /inference="COORDINATES: protein motif:HMM:NF025126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDK5716453.1"
                     /translation="MKQSTKSNTNKSLFKNLTWDYFKAFINKKLSDPKTKHIYQKRKI
                     DVESTFVNLKANLGFQRLSVRTQSKVECELGIALMAVNIRKLAKISARFRSLIRKKPS
                     NSKN"
     gene            complement(20112..>21065)
                     /locus_tag="PTC28_001160"
     CDS             complement(20112..>21065)
                     /locus_tag="PTC28_001160"
                     /inference="COORDINATES: protein motif:HMM:NF013752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDK5716454.1"
                     /translation="IIFGLRAQLLEEQLITEDVIYIDGTKIEANANKYTFQWLANTKR
                     FSQSVIEKSTALYEQLVSEEIIPEIKRESGHELTSEELNQIETHLGHKNDALTSEIET
                     TQDVETRKNLRKERSNVRQSKKAIQDFKDRKLKYDKQMEIYGDRKSYSKTDHDATFMR
                     MKDDHMRNGELKPGYNLQIATNNQFVLAFGVYSYPGDTRTLKPFLKSIHKLYGDIPEY
                     IVADAGYGSEYNYTVILDEFEKTPLITYSMYLKEKQRKYKNNPFITANWEYNVIEDYY
                     ICPNKKTLHFQSYRKRRDGYGIQRDFKLYACEACVGCPLRS"
BASE COUNT         5936 a         4898 c         3781 g         6450 t
ORIGIN      
        1 tcatttcttt ttttgactcg acaagaatta attatacaca agtcattcaa caaagtcaac
       61 aacttttttt aattaatttt tcatcttcgt tgtggcaact tattgtgccg ctcaacaaga
      121 tataactata cagcctttta aacagtttaa caatcataaa aattacacca tttcaatcac
      181 tttgttatat aaagcgcaca ttgttgtttt ttatttttag gatgaattga aaaaaatgta
      241 atcaaacatt ctatctcaac tacagccaac ctaatcattt gctgcatact tcatatagca
      301 ccccacatca aacgttttaa aatcgcatct tttttataca taatcccccc gaacccataa
      361 caacaaaaaa agaaaagcaa catgtgtatg caaccaccca tgtcgctttt cttcatataa
      421 gtttaaacca ttacatttcc gtacggccag aaatcgctct cgacaatgtc acttcatccg
      481 catattccaa atcgccacct accgacaaac cttgtgccaa tcgcgtcaca cgaataccca
      541 aaggtttaac aaggcgtgag atgtacatcg ctgtagattc accttctaaa ttcgggttca
      601 tagctaaaat taactctttg accccttcat cttttaagcg ttctactaaa cttggaatat
      661 tgatgtcttc aggtccgata ccatccatag gtgaaatcgt cccgtgtagc acatgatata
      721 accctttata ttctttcatt ttctccatcg caatcacatc tttatcatct tcaacgacac
      781 aaatcattga acgatcacgc tgtttatctt cacaaatata acaagggtct tgttcggtaa
      841 tatgaccaca tacactacag taggtgagtt ctcgtttaac atctacgagt gctttagcaa
      901 attgtacgac gtcatcttct ttcatatcta gtacgtgaaa tgccagacgt tgagccgtct
      961 taggaccaat gcctggcaat ttcatgaaac tatcaatcag tttcgatatc ggttgaggat
     1021 aatgcatctt acatcattcc tgggatgtta agacctttag tatgtttacc taaacgctct
     1081 gcagttaatg catctgcttt attcatcgct tcgtttgttg ctgctaatac taggtcttgt
     1141 aacatttcta cgtcttcagg gtctaccact tcttcattaa tgatgacatc gaccacttct
     1201 ttatgtccag aaacaacgac tttgaccatg ccaccgccag ctgttccttc aacgtgttct
     1261 tcttttaatt tttcttgctc ttctgccatt ttcttttgca ttttttgcat ttgtttcatc
     1321 atttgttgca tatttccgcc accgcgcata aataaatcct ccttaatttt caactctatg
     1381 ataataagag cttgtctctc ttagattcga tttcaattat acataccttt caatcgcttg
     1441 tcatgtttct tcgtccatca gatgcaccat ctcttcgcca aacaaatctt ttgcagtttg
     1501 tacgacgtca ttttgttgtt cagctggttt tttcgcttct gatgcgttgc tctgagtatt
     1561 tccgcgttta cgatttgaaa tgtaatcact gcggacctgc atccatttat cagctgggac
     1621 accgaccact tctacagatt tgttaatcat atctttcacg acattttcaa tacttcgctt
     1681 tttctcttca tcttttttca agatttcgca atgaatttct tcgtcaaatt tgattaacac
     1741 tttatcttca cttgctgcga caggttctga attttgaagt aagctgacga gcgatttttg
     1801 attgcgatct ttcgcatatt gaatgacatc cgcccaacgt tctttaataa gcgcaatgtc
     1861 ttctttattc gctttatcca atactttcgc aatttgttca atagaatacg tcgaaccgct
     1921 tcccctacgt ttagctgctg ctggtggctt aggtggtgcg gtcgcggttg agaagccttg
     1981 agattttaat gtttgtaact cagactccaa cgcttccatt cgtctcatca tcgcgtcatg
     2041 ttgttcagtt ggcgcatgat tgactacgac ttcacctgta cggttcactt ctttcaccat
     2101 ttcagataac ttcacgagca agacttctaa atggacgttt tgattcacac taaatcgaat
     2161 ggatacgagt gtatcgttaa tgacatctat cattttgtat aagacttcta aattgaatgg
     2221 cataagcgca tcgtattctg tttctaattg cgtcgttttt gccataatcg tatctcttac
     2281 aaaataaatc atgtcattaa tgagacgatt cacttctttc ccttcgctca caaattgatg
     2341 ataacgttca aaggcttcat ggacgtgacc ttgaacaacg tcttggaaaa gagcgttgag
     2401 atcagactca tctaaacttc ctgtcacatc taaagcatcc tttaatgtca aacgttcatc
     2461 accaaatgca atcgcttggt ccataatact gagcgcatca cgcatcccac cttcagacac
     2521 tttagcaata aacgtcaaag cagcctcatc aaactcaatt tgttgttggt gtgccacata
     2581 gcgcaaacga tccacaatac ggttggcatt aatcgccttg aagtcaaagc gttgtgcacg
     2641 cgaaataatc gtcggcggta ttttatgtgg ttcagtcgtc gcaagaataa aaatggcgtg
     2701 tgcaggcggc tcttctaacg ttttcaacaa cgcattgaat gcccctgtcg tcaacatgtg
     2761 cacctcatcg ataatgtaca ctttatattt cgattcactc ggggcatatt tcaccttatc
     2821 acgaatattg cgaatttcgt cgacaccatt gttgcttgct gcgtcaattt caatcacatc
     2881 agaatggtac ccttgtgtga ttcctttaca acttgcacat tcattacacg gttcgccatc
     2941 atcgcgtact tcacagttaa tcgctttggc aaatatttta gcgatactcg ttttcccagt
     3001 accacgtggc ccactaaaaa tataagcatg cgactgttta cctttagcaa tagcattttt
     3061 aagtgttttg gtcacatgtt cctgccctac aacatcttca aagctttggg ggcgaaacat
     3121 gcgatataat gcttggtaat ccaatttggc acctccgaat taacaatgat ttcattatag
     3181 cacgttacaa ctgatttgta tggcgacatc ctattcaaaa aacgcttccg gatagatcac
     3241 tttaccgtta ggcgggtcct cgagtgtatc ccacaaaaat ttgacgcgat agttttcaga
     3301 cggtacatca aatggcgcca aaatatgatg tcgtattgct tcctcgtaac ctaacttttg
     3361 atagtaatcc gcatggccta acacgacgat tgttgtatag ttctcagcaa acgcacgctc
     3421 ctctaaagcc tgaacgagcg ctcgaccaat tcctttatta cgatattccg ccacgacagc
     3481 taacggagct aatgcaagtg cagtatacgt cgtgtcatca ttttgaatcg tcacttcaga
     3541 acacatgccg tggccgatga tgtcgccttc atctgttttc gcaacgactt ctaattcata
     3601 acgataattc ggtgacaagc gcagacgttt gacgagatga tgttcttgat gatcagactc
     3661 agggacatct tcaaaagcat tcgccaacat ctcatatgtc gcctcatagt cattttcggt
     3721 gggtgtactt aaaaatatgg acattacttc aacccctcag ctttaaaata aagtataaaa
     3781 aaagagcgac tcttaatagc cactctgaca tctatttgac aatacattac atttaaaatt
     3841 aaaaaccgtg cacctctgtg tcgaatgtgc atcacaaacg ttaccagagt cgacagctaa
     3901 atctcggcta ccctacggca catacgagga tccacttaat gctgcttccg tcaggacctg
     3961 acatggttca tgggttcata ttgcatagga ccgaaatctt caaacacctc gtgctctggg
     4021 cagacttcac aaatacacac ccttcacaaa ggaattcagc ctcgcgtaaa gcggatttcg
     4081 agttaaggga accgctacct ccccgcttag cacggtacat ctaataatac tatacctcag
     4141 attaaaattg caagcataat caagattgta agcaatgaaa ataatgtaat gtttcactca
     4201 tcatgataaa tgtgaatgtc gtctagaaaa atcaataaac ttaaattcag tggcaatatg
     4261 tttagataca ttatactgaa atttcgttgt atctttcaaa tggacgatgc ctcgtacagt
     4321 ggccgaatat tgcggcgtca catcgccaaa tgctgcccgc tccaattctc caaacggttc
     4381 gaacgtaatc gatttgctcg aaaaactaat ctcataccct ttcacttttt caatataatc
     4441 gtataaagag ttttgaacga ccgcttcaga taactctgga aacagattcg cacgcacata
     4501 atcttcatca acaattttcg ttataccttc aatttgacga taacgaatga aatgccatag
     4561 ttcctcatca gttgtcattt ccaacgcctt tttcacttga ggcacgtccg ccgctttgat
     4621 cttttcaaaa cggacgacga ctgtttcgta atgaagtccg agttgcgttt gaacctcttt
     4681 aaaacttttc aaatcagcaa acggaaactc tgtcacgcct tgataaatga cgactgaacc
     4741 tttaccacga atcttttgaa tcatgccatc caagacgagc atgttcaaac ttttccgcac
     4801 tgtttcacgt gacacgttgt attttttcac caactgatgt tcagaaagca attgttcgcc
     4861 gtattcatat tccccttcca aaattgctat acgtaaacgt tcataaatat attgaaattt
     4921 attttggttt ttcatccgac ttgcctctca ttttcattat ctcgctacaa cgattgttgc
     4981 gtatgcttcg agctcattcc cttcaattat accattttga aggacgaccg aaccagagcg
     5041 atccaaatct tctggcaatg tcactttttc tgatgtcata ttcgcaataa tcaaccaagt
     5101 gtccccttga tagcgtcgtt catacacaaa cagttgtgga tgatcgagat aacgcggtac
     5161 aacttctccg tacgtcacta tatcgtgttc atgacgtaac tgaattaact ttttgtacgt
     5221 gtataaaatg gattccgggt ctgccatggc cgcttcaaca ttcaccgtgt tgtaattatt
     5281 tgccacttca atccacggcg ttccagttgt aaaaccagca tgtgcttcat cattccattg
     5341 catcggcgta cgtgaattat cccgtgattt ttgtccgagt atcgttaaaa tttccgcttc
     5401 atctatcccg gcttcacgca tttcacgata cgcattcaac gactctacat cacgatattg
     5461 ttgaatcgat tgaaaatgtg gatctgtcat accaatttct tcaccttggt aaatataggg
     5521 tgtcccttgt aataaatgta aagcaatggc tagcgttttg gcactttgtt gacgtaacgc
     5581 ttcagtcgca tcactaccaa accttgaaac gacacgtggt tgatcatgat tacaccaaaa
     5641 aatcgcattc caaccattac cagcatacat tttcgtttgc cattccatca aaatctgctt
     5701 caattgcaac aaatcaaatt tttggttcgt ccacttttgt ccatcacgat agtcgacttt
     5761 taaatgatga aagttaaaca cgctgctcaa ctcttggcgc tctggattcg tatattgaat
     5821 acaatggtca atggatgtag acgacatttc cccaactgtc atcatatctc gatcaccaaa
     5881 cgtatgacga ttcatttcat ggatatagtc atgaacacgt ggcccatcag tgtaatactc
     5941 tttaccaatc tcatttgagt cttcaaacgt atctttagaa atcaagttaa ttacgtcaaa
     6001 tcgaaaacca tctacaccga aatcaatcca ataattaatc atttcgtaca atgcgtgacg
     6061 cacttcggga ttatcccagt tcaaatccgc ttgcgtaaca tcaaataaat gcaaataata
     6121 agcatccgtt tgctcatcgt attgccatgc attcccacca aacttcgata accaattcgt
     6181 cggcggcccg tcttctgaac gtctgaaaaa gtaataatct cgatacggat tgtctaccga
     6241 ctgctgcgct tgttgaaacc attcgtgttc agtagatgta tgattgataa caatatcgag
     6301 catcattttc aatcctcgtg catgcgcttc atcaatcaat gtacgtaagt catctttatc
     6361 cccaaattgt gcattcactt gatagtaatc acgaatgtca tatccgttat cattcatcgg
     6421 cgaatcgtaa atcggtgtga gccataaata atcgacccct aaaaattgta aataatccag
     6481 tttctcaata atccctttta aatcgccttc cccattacct gtcgtatcgt taaaagactt
     6541 tggataaatc tgatacacga ctgatttttt ccaatcttgc cttaccatgt gaaacccacc
     6601 ttttttcttt gtgctgtgca acatgttaaa acttactgtt cgtcattgac cattattttc
     6661 gttttttcac gacttaattt tgcgaaaatg atcgttaaca ctgctggtac gaccatcgaa
     6721 atcaacgtcg caataccgaa aacaccccag aattgtgatt taatcgaaat aatcgcaggt
     6781 aaaccaccca caccgactga acctaatacg ccagagccac ctacaatcgc cccagtgacc
     6841 atcgtcgtta aaatggctgc gaaaaatggg tatttcaatg gcaagttgac accaaacatt
     6901 gccggttctg taacacctaa aaagcctgaa ataccagatg tcatcgctaa accttgttct
     6961 ttattcattt gacgacgttg ataaacgaac catgcgccaa atgcggctga accttgtgct
     7021 atgttagaca acgctaaaat gggccataag tacgtaccac cgagttcact tcccatgagt
     7081 tggaagtcga ctgctaaaaa catgtgatgc aaacctgtaa tgaccaatgg cgcatacaat
     7141 aagccataca ctgcgccgcc aaaccaaccc gcattgccaa ataaaaattg aacggctgat
     7201 gtaatacctg tacccatcca taacgcgaga ggtccgataa ataaaaaggc taaaaatcca
     7261 gttactaaca aagcgactgg accgacaact aggagtttta tcgaatcatg gacgacctta
     7321 tttaaccctt tttcaatttg cgctaacacg tatgctgcga ggaggacagg tagtacttgc
     7381 ccttgatagt tcagttgttc gatcttcaaa ccgaaaatgt gccacgctgg aatttcatca
     7441 actttaccaa tgtcatattg tgataacaac tgtggatgca tcaatacgag cccgagcaca
     7501 attcctaata ccggattgcc gccaaacaca cgcattgcac tccatccgac taatgctggc
     7561 aagaaaataa atgccgttgt cgcaatgaca ttaataatat tggcgaaatc agcaatttgc
     7621 ggaaatcttt caataatgga cggcgcgtta cctagacctt tcatcgtcaa cacattgtta
     7681 acccctaata acaaaccagc cgttacgata gcaggtaaaa tcggaatgaa aatatcacca
     7741 agcaacttaa ttaaacgttg taacggattt ccctttttag ccgcttgtgc tttcgcttcc
     7801 tctttcgata cagcttgcgt attcgtttct tccatcaaaa ccttgtatgc ttcgtctacc
     7861 gttccaggac caattacaat ttgatattgt tgatccgctt taaattgccc tttaacaagt
     7921 ggattctcgc ttaacttctc tttgtccact tgattgtcat cttttaacac taatctcaaa
     7981 cgcgtcacac aatgtgttgc agattgaata ttttcttctc caccaattgc ttcgataata
     8041 tcacggacat ctttcttttt cactgccatc actgtcactc cttatccaga aacttgtata
     8101 gacaaattat aacttgtaca tacaagtttt gtaaaggctt acattttttc ttgcatgtta
     8161 tgtaacacat actcgagata accattgggc ttccgcttgc caacaatagc aagatgggag
     8221 gcaacatgtt ttaacatttc gaaaataaaa agaccgagaa aattcctttc ccagtctctt
     8281 atcgtcgaaa tccgattcag tttaaaaaga ttaaaaaaag ccaagcattc aattacttga
     8341 atgtttggct tttatatcta ttagtcttgg attttactta taatggcgga ggaagaggga
     8401 ttcgaacccc cgcgagccgt taagcccctg tcggttttca agaccgatcc cttcagccag
     8461 acttgggtat tcctccgtgt gacgagcaca taacatatat tattacagct cgttcacatt
     8521 gtcaacaaga attttacaaa atttatataa aaacttttcc ggctatgtag cggtgcactg
     8581 attgcgcgac ttcacggcct tctttaatcg cccaaacaac aagactttga ccacgtcgtg
     8641 cgtcccctgc tacaaaatat ttcgactgat tcgtacgata atcttttgtg tccgccacaa
     8701 ttttttgacg ctctactttt aactgcaatg cgtgtgccaa tggtgatttg acaccttcaa
     8761 agccaatcgc gagcaaaacg aggtcagctg gaataaaaat ttctcgatca tcccctacaa
     8821 ttgtaccgtc agcatgatca cgttgaactt gcgcataaat accacggaca tcccccaact
     8881 catcgacatc gaagcgcatc gtttgaatac catatgcacg gggttcttga ccatatttcg
     8941 cttcatattc ttggtgcgca tagtctttct tcaatacagg ttgtgcgagc ggccaactat
     9001 agttaatttc aaaacgttca ggtttacgcg ctttacggtt gaattggata atggattcgc
     9061 aaccatcgcg taatgctgtc gcaacacagt cagcccccgt atcaccgtca ccaatgacca
     9121 cgactttttt accttgagca gaaattgttt gcgtgtccgt ttcattcaat aacaattgcg
     9181 tttgttcagt cagataatcc atcgcaaaat gaataccgcg acccattcga ccttctaacg
     9241 gcaagtcacg tggtttttct gcacccgtac aaacgacgac ggcatcatac gtctcatcca
     9301 gttcgttttt actcacatct ttaccgattt ctacattaca gtgaaaagtg atacctgctt
     9361 cttctaataa acgaatacgt cgaaacacaa cttctttatc gagcttcata ttcggaatac
     9421 cataagtcaa caagccacct ggttgggcat ttttctcata caccacgact tgatatccta
     9481 atgcgttcaa ctcttctgct gcggctaatc ctgctgggcc acttccgata atcgctactt
     9541 tttcattgcg acgtactgaa ggggttttcg gcttcaccca tccttgttca aacgcctcgt
     9601 caataatcgt tctttcaatc cctttaatcg ctacagattc acgattaatc ttcatgacac
     9661 aggaggcttc acacggagct ggacacacat accctgtaaa gtccggaaaa ttgttcgtct
     9721 ctgctaaacg ttcatatgcg gttttaaagt caccgcgata cactaaatcg ttccattctg
     9781 ggatgtagtt accgagcgga cagcccactg tttcacgttc caccatttca cccacttggc
     9841 aaaatggggt cccacaatcc atgcagcgtg ccccttgttg ttgcgcatct tcttgtgaga
     9901 aacgtgactg atatgcctca tagtgttgaa tgcgtgtctc tagaggcatt tctgcgagct
     9961 tttgcttatc atatttcata aaacctttaa attcacccat agttagcctc ctttagtaca
    10021 cagcaattgg ttccgcttgt gccacttcat ctatattttg atcatcatta aatgcagcta
    10081 ataatgcatc gtcttgtgat gcatgttgtt gctgatgata atggattttt tgaaccattt
    10141 gcttataatc tttcggaatg actttgacac attgctgtaa ctgcgcctca aaatcagcta
    10201 aaattactgc tgctttttga ctttctgtat aagcgagatg acgttccaac atacctttta
    10261 acattgcttt ttccgcttcg tcctcgacca catcaaaatc taatgttgcc agttgattgt
    10321 gtgttttaaa ttgttcaaca tctgaaggga acgcgtaaca cacaccccca ctcatacctt
    10381 ggccaaagtt tttgccgaca tcacctaaaa tgacgacccg cccgcctgtc atatattcga
    10441 ggccgtgatc accgacacct tctacgacaa cgtgtacgcc actattacgg atacagaaac
    10501 gctcacccgc acgcccatta atatacgctt cacctttcgt cgcaccatag aaacaaacat
    10561 taccgacaat gatttcggct tcacgtgcga cattcggtgc attgacgaca attttaccgc
    10621 cagataatcc tttacccaca tagtcatttg catcacccgt atgatggagg gtcagccctt
    10681 gtggtatcca cgcacctaaa ctttgtcctg catgcccgtg cgtttcagct acaatcgtat
    10741 ctgttggcaa gccattcaaa ccgtgggcgc gcgtaatttc actacctgta atgacaccga
    10801 tgttacgctg ttcattgccg acttcgaact gacctttaaa gcgactgccc gcttgaatat
    10861 gcgcttgcga tgcgggtaat aacgtcgtca agtcaaaacc atgttcgaga ccgtgacgtt
    10921 gttcaatctc ttttgtacgt ggaccgacat gttgatacaa caagttttct aacttcattt
    10981 cacgtgcttt tggatgatga taggcaacag ctgaacgttt caataagtct gtacgaccga
    11041 caagctcatc gacagtacga ataccgagtt ctgccataat ttcacgcaat tcctctgcta
    11101 caaaatgcat ataattcacc acatgttgcg ctttacctgt gtagagttta cgcaagtcac
    11161 cgttttgtgt cgcgataccc actggacacg tatctttatg acagacacgc atcataatac
    11221 agcccaagac gactaacggt gctgtcgcaa agccaaactc ttctgcacct aacatacatg
    11281 cataggcgac gtctttacct gtcagtaatt taccatctgt ttctaaacga acacgtgaac
    11341 gtaaatcatt catcatgagc gtttgatgtg tttctgcaag accaagctcc catggcaatc
    11401 ccgcatgctg aatactcgtt ttcggtgacg cacctgttcc accatcgtaa ccactaatga
    11461 cgattttatc tgcaaatgct ttcgcaaccc ctgccgcaat cgtgcccaca cctgatttag
    11521 aaacgagttt cacagtaatg tctgcatcgc gattaacatt ttttaaatca tgaatcaatt
    11581 gggctaagtc ttcaatcgaa taaatatcat gatgtggggg tggtgaaatc aagccaatac
    11641 ctggtgttga accacgcacc tccgcaatcc atggatacac tttactgcct ggcaactgtc
    11701 cgccttcccc tggtttagcg ccttgagcaa ccttgatttg aatctctttc gcatgttgta
    11761 gataatgact cgttacacca aaacgacctg aagccacttg tttaatcgca cttttgaagt
    11821 cgcgcccatc tgcttgcggt tcatagcgtg ataaagcttc tccgccttca ccactattac
    11881 ttttaccacc gagttggttc atcgcttccg ctaatgtttg atgcgcttct tgtgaaattg
    11941 acccataact catcgctcct gttttaaagc gtttcacaat ttcctcaacc ggttcgactt
    12001 gtgcaatatc gatggcctgt tgtgatttga aagcaaataa gtctcgaata tggctgctcg
    12061 tttgatcgtt cgccacttta gaaaatgctt taaactgcgc ataatcattg tcgcgacacg
    12121 catgttgaag taatcgtatc gttgttggat tgaatgtatg atgttgacct tgttgacgcc
    12181 attggaatgt gcttcctggg tctaacgtgt cacctttaat cgtttggcgc gccttgtttt
    12241 cagcgtctaa tgtttcaatg gagatgcccg ataatttaga agttgtgccc gtaaaataat
    12301 cgttaatcac tgcttctgat aaccctaccg cttcaaagat ttgcgcccct tgataacttt
    12361 gaaccgtaga gatacccatt ttcgccatta ctttaatcag accctctgat aaaatggcgt
    12421 tgtaacgcgc gacgttatcg gctactacac cgtctaatct accgtgctct gtcaattgcg
    12481 caatcgtttg ttgtgcaaga tacggaacga ctgcattcgc accgtaaccg actaaacaag
    12541 caaggtgatg cacttcacgt gtttcaccag aacttgcgac aatgctcgtt tgcatccgta
    12601 aattttcacg aattaataat tgatgaatat gactcaccgc taataaaatc ggcatcgcat
    12661 actggtctgc ttcggtgacg tcactatcat tcaacacgat gatttctgcc ccttgacgta
    12721 ccgctttgat gaccacttcc cctaagttgt ctagcgcttc ttttaatcca cctgtgtaac
    12781 ctgtcgaaaa ctctgctacc gtaaagcctt cttgtccgat gacgtctaat tgtgctggtg
    12841 tcaacacggg atgtttcagt tgtacccgct tgaggacatc cggccctggt tccagcaagt
    12901 tgccttcttt acctaaataa ctcaattcac tcgttacaat tttttcacga tatgcatcaa
    12961 tcggtgggtt cgttacttgt gcaaagagtt gtttgaaata attaaacagt gattcaggtc
    13021 gttcgctgag tacggcaagt ggtgcgtcgt aacccattgc cccaatagga tctttgccac
    13081 ctgtcacgag ttcagttaaa tacttgtcca actcttcttt cgtatagcca aagcgttgtt
    13141 gcattttaag aacatggtct acagcgacag gtccacccgc atatgagacc gcttctaaat
    13201 cgagcttgtg ttgatacgtt tccaaccatt ccaaataggg ttgctgctct gcaatcgcgg
    13261 tttttaattc atggttttcg ataaccttat gttgattaaa atcgacaagc aatagcttac
    13321 ctggattcag ttgcccttta aatacaacat ctgcttcgtc tacatccacg acgccgactt
    13381 ctgatgaaaa gacgatttca ttttgtttcg taattgtata acggcctggt ctcaagccat
    13441 tccgatcggt taaagcccct aacttgtcac catcacagaa tgaaatcatg gtcggtccat
    13501 cccacggctc cattaaatag ctataaaatt cgtaaaatgc gcgtactttc ggatcgttac
    13561 tttcgttata caaccacggt tctggaatga gtaacatcgc tgcttgttca ggcgacatcg
    13621 ctaaacttaa aaactctagt gcgttatcca caatagccga gtcactgccc gattcatcca
    13681 atatttgatg gactttatgt tgcgcctcgc cgaaaatcgt ttcaattaag cgacgttgac
    13741 gggcacgcat ccagttcaca ttaccttgaa tcgtattaat ctcaccgtta tgcatgagca
    13801 agcgatttgg atgtgcacgc tcccaactcg gaaatgtatt cgtactaaaa cgcgagtgta
    13861 ccgaaccaaa tttcgatacg tatgacggct gttgtaaatc gacatataat gatttaattt
    13921 ggtctgaacg caaccatcct ttataaacaa tggtacgtgt cgataaactc gtaaaatata
    13981 aatctaactg tgcactttca ccatattttt cgatttgctt acgcgcaagg tacaatgcac
    14041 gcttaaagtc ttgagcgctc tcatttacga cgaagacttg ttgaatgaca ggcatcgttt
    14101 ctgctacatg cggcgcgaga cacgtcacgt cgaccggtac ttgacgatca ccgatgatac
    14161 gcaacccttc tccttcaaaa attgatgcca ttaccgctgc atgttttgtg tcagaaatca
    14221 tgacgttggc aaacaacata cctaccgcat agtcaccttc agtcggcaaa tcaaaatcag
    14281 tgacttctga gaaatattga taaggtactt ctgtcataat gcctgcccca tcacctgtaa
    14341 taccatctgc accgatacct ccacggtgat cgagacggcg taacatttct aaagactttt
    14401 cgacaatctc atgagaacgt tcattattca tattcgcata aaagccaatc ccacaagcgt
    14461 catgttcttc acgactgtca taaagtccga ttttggaatt taaataattg ttagacattt
    14521 ctgacacctc cctttagtaa tatttcaact atatagcaaa gcgatttatc acatcaatat
    14581 atacttgaga tgaaatctat ctaattttga gataatataa attgtaagag gtggaatggt
    14641 atggaattga aacaactcaa atactttgtc gaagtcgcaa aacgtgaaca tatttctgaa
    14701 gcagcactcg aattgaacgt cgcacaatca gcaattagcc gtcatattca taatttagaa
    14761 aatgaactcg aaacatcatt gttttatcgt cgcgggcgta acgtattttt aaccgcagaa
    14821 ggcaaacaat tgcttgaata tgcaaaacaa attcttgagc aagtcgatct cactttgtcg
    14881 cagtttcaaa cgcaagtaca acaacagcaa agcgtctaca caatcggtta tgtggacggc
    14941 tcaatcggcc aaattttacc gcaagtgtta cagacaattg aaaacgagct gtccttgtca
    15001 ctcattccta cattgttaga tgaacaagag acattacaag cgttgcgagc acaagaaatt
    15061 gattttgcac tgacaactgt cacaacgacg gatcctacat ttgaaatagt gccattagta
    15121 gaagaaacgt acgtcttata tggggactta cacgcaccaa tgatgaacgt gccgaatcca
    15181 ccgttatcac acatattgaa acaaccgtta tacttgcttg aaccgattcc tacagacttc
    15241 aaaacgtatt tgataacaca tgccgacaaa cccgtccgtg tcttgaatca agaacaattc
    15301 gcacgcttta ttttacgcaa tcaaaaaggc ttcgtacttg caccaacgta cgtcaactta
    15361 tatagtcaaa atcaacaatg gaaaaagatt tcattgtcac atacagattt caaaaaaacg
    15421 ttacacctca tttatcgacg cgatttacaa aaacctttac gtgatgaagt catccaaatc
    15481 atcatgacac atatacaaca acgttcggtt tatcattaag gagaatgatt tatgaagcaa
    15541 ctttcgaaaa aaataaacac cattgtcatc gtggtgagta tcatcgtagc gatttgtgcg
    15601 atagtattca cacgtttgaa tagttcgttt tatcatatcc cgctcggtga agtgacgaaa
    15661 attgaaagtc atcaccaaga aaagtcagta gatgaacaac ataatcaaga tgtgaaatat
    15721 aaagacgtgt tacaagtcaa attgttaaat acaaaacaac aaggcgacac ccttcacgtc
    15781 gaacaccggt ataacgcctc gaaaactgaa gaacaagcgt atcaaccggg tgataaagtg
    15841 ctactgcaca aaggaaaaaa tcaaaaagat acatatatta ttgagaaaaa acgcgatacc
    15901 gtactcgtga cagtcatcag cgcgttcttt attgcattac tcattgtcgg gcaacggatc
    15961 ggacttcaat ccatcctatc actcgttatt aacgcgcttg ccattttgtt agccattagt
    16021 ttgtatcacg cgtatccgca actgaatctc tttttattaa tgagtctcgc agtcatgatt
    16081 gcgacgattt tgacactttg gctcgtcatt ggttggtcaa tgcgtacgat tgtgaccatt
    16141 gtcagcactt tactcggcac gttcatttgt atttttatcg catggagtgt catcggttta
    16201 acacacgggc aagggattaa atatgaaacg atgagctttc tcacgattca acctagaacc
    16261 gtcttcctta cttccgtcat ggttggaacg cttggagcag tgatggatgt cgccattacg
    16321 atttcaagcg ggatgtatga agtgctacag cggtcgccac acatttcaat gcaacggtgg
    16381 gtgctcgcag gtcgtaacat cggtcgtgac attatgggaa cgatgacgaa cattttatta
    16441 ttctcatatc ttgcaggaag tttaccgatg ctcttacttt atttaaaaaa tggcaacacg
    16501 ctcacttaca gcattagcat gaattggtcc ttagaaattt cccgggcaat tacaggcggg
    16561 attggcatcg tcttaactat cccattgacc atttttctca tgcgtatatg gttaagccta
    16621 cgaggaggtg caacacgatg aatgccattg tcatcttagg tttgattctt ttcatactca
    16681 tgctcatatt tggcggtaaa acaggactcg tttcattttt aacgctattt ttaaacttta
    16741 tcattttatt cattactgta ctcgccatcg tttttggcgc gcctatttat gtcgttactt
    16801 tcattttttg tattattgtc tcgatggtta acttgttttt actcaaccgc tttaatacaa
    16861 aaactttagc tgcatttatc gcgagtacgg tcacgacatt attaatgatt gtcgccgttt
    16921 acttgtccgt acattggggt catctacaag gtttcaccca agaagaacaa gacgaaacgt
    16981 atatcttctc cttaaatatt gggattgata tggaacagtt tatgattttt actgtgctac
    17041 ttgctgtcat tgcagcagtg attgacttgg cgattacgat tagctcacct gtatttgagt
    17101 tacacgagac gaacccttca ttatccgaaa gcgaactgtt tcattcaggc atgcgcgtcg
    17161 gccgagaaat tttagcgaca tctgcgaaca cgatttatct cgcattgatt gggggttcaa
    17221 tgacaattgt tttttggttt ttcaacttgc attacagttt cggccatatg ctcaatgcca
    17281 aattatttgc acaagaagtc attacaattg ctttaggtgg cattgccatt gcagtctgta
    17341 ttccgattac ggctatgata accgcttggc ttgtaaaaca tcgtcatcaa cttccttttc
    17401 atctagactg agcttcaagc cgagtgaaaa cgggtacaat gtgaacgagg tgaatttata
    17461 tgacagcgat tcatattcat ggcgcacgtc aaaacaactt aaaaaatatt gacgtctcca
    17521 ttccgaaaca tcagttaacg gtcgtgactg ggcgttcagg atctggcaag tcttccctcg
    17581 tttttaatac gattgccgct gaatccgaac gactattgaa cgaaacctat tcgagttata
    17641 ttcagcacca attaacgcaa tatgaaaaac cggatgttga ccatattgaa aacttgcccg
    17701 tcgcgatggt catcaatcaa aaaagactcg gtggcaattc gcgctcaacg gtcggtacca
    17761 tttcagacat ttatgcgtcc gtccggctat tgtggtcacg tattggcaca cctttcgtcg
    17821 gttattcaga cgtcttttcg ttcaataatc cgaatggaat gtgtgaacat tgtcaagggc
    17881 ttggttatgt tgaagatatc gacttgaatg aactgctcga tttcgacaaa tctttaaatg
    17941 aaggtgcgat tcgctttccg tcatttaagc cggatagttg gcgcgggaaa cgttatcgct
    18001 attcgggttt gtttgataat gataaaaagc tcaaagacta tacaaaagaa gagctcgata
    18061 cgtttcttta taccgagcca acacgcttga aaaatccacc ctcagaatgg cctaaaactg
    18121 caaaatttga agggttaatc caccgtttcc gacgctcatt tttaattaat gataactttg
    18181 aaaagaaacg ctttttaaag gacgttgaac gcgtagtcac caaacaaaca tgtcctgtct
    18241 gtcacggaca acgcttaaat caaaaagtgc tcagctgcaa aattcatgga ctgaacattg
    18301 ccgattttac agcactgacg attgaagaaa cgctcccatt tttagagcaa atcgacagcg
    18361 acaaagcgac ttatattatc gaaccattga aagcccaact ccaagctttg aatgatattg
    18421 ggctgaacta tttaacgctc gcacgtgaaa caacgaccct ttctggcgga gagtcacaac
    18481 ggattaagct tattcgtcat ttgaacagtc cgttaaccga tctcgtgtac attatcgacg
    18541 aaccgagtgt cggtttacat ccagcagata ttgaaaaaat caacgaaatc atgctcaata
    18601 tccgtgacaa aggtaatacc gtcatcatcg ttgaacacga tcccgacgtc atcaaaattg
    18661 cggatcacgt gattgacatc ggacctggcg cagggaaaca tggcggccag attacatttg
    18721 aaggcagtta tgcacaactt aaacagtccg ataccgatac agcgcgcgca ttgacacgtc
    18781 aacatcactt gaaacagtca gcgattcgtg acaaccaagc atggttacac ttagaacatt
    18841 tgcaacacaa caacttacaa gatgtgtctg ttgcgatccc gaaaaatgcg caaacggtgg
    18901 tgacaggtgt cgcaggttca gggaaaagct ccttaattaa aggcggtttt gcgaaacatg
    18961 aagatgcaat actcattgat caaaaagggg tccatacttc caaccggccg aatttattaa
    19021 cgtataccgg cattttcgat gacgttcgtg aatttttcag taaagcaacg ggtctgaaaa
    19081 aaagtatgtt cagttataat tctgatgggg cttgtccaaa ttgtaatggg aaaggcgtgc
    19141 tcaaaaccga actcgccttc atgccagact tctcccaagt atgcgaggtg tgtggaggga
    19201 cccgttatcg tccagaagtg ttggaggcga aagtcgacgg ttattctatc gcggacgtgt
    19261 tagcactcac cgttgaagaa ggcttgtcac ttttccaaac acatgacgcc attgctcaaa
    19321 cgttaagcgc cttgcaatcg acaggactcg gctatatgac actcggccaa tcactcgaca
    19381 ccttatctgg cggggaggtt caacggctca aactgacgcg ctacatgatt gagcctgtta
    19441 cagaaaaaat atttattttc gatgaaccga caacaggttt acatgaagat gatatcccaa
    19501 ttttacaggc acgcttcgat caacttattg aagaaggcca taccgtcatc ttaattgaac
    19561 acaatatcac gatgatgaca cgagcagact ggctcattga cgttggacct ggtgcgggaa
    19621 atcaaggggg acgcattctt tatagtggac cacctgcagg cctaaaaaac gtcgccgaat
    19681 ctcgcaccgc tccccattta tttggtagtt tatcggaata agtggtacat tgagtatggg
    19741 gctaggacat agaccttcag ctcctttaag aaaaaaaacg tcaaaattca atttttagaa
    19801 tttgatggct tttttcttat gagcgaacga aaacgagcac tgattttggc cagttttcgt
    19861 atatttactg ccatgagtgc gatgccaagt tcacactcaa cttttgattg ggtgcgaacc
    19921 gataatcttt ggaaacccaa attagctttc agatttacaa aagttgattc cacatctatc
    19981 tttctctttt gataaatgtg cttcgttttt ggatctgaaa gcttcttatt tatgaaggct
    20041 ttaaaataat cccaagttag atttttaaat aaacttttat ttgtgttaga ctttgtactt
    20101 tgcttcatac attaacttcg taatggacag cccacacacg cttcacatgc atataattta
    20161 aaatctcttt gaataccgta tccatctctt ctctttctgt aactctggaa atgtaatgtc
    20221 ttcttattcg gacatatgta ataatcttct atcacgttgt attcccagtt tgcagtaata
    20281 aatggattgt ttttatattt acgctgcttc tctttgaggt acatactata agtgattaaa
    20341 ggtgttttct caaattcatc gagtatcacg gtatagttgt attcacttcc gtaacctgca
    20401 tctgccacga tatactctgg aatgtcacca tataatttgt gaattgattt taaaaatggt
    20461 ttgagcgttc ttgtatcacc tggataacta taaacaccaa aagctaaaac gaattgatta
    20521 ttggtagcta tctgtagatt gtaacccggt ttcaactcac cgtttctcat atggtcatct
    20581 ttcattctca tgaaagtcgc atcatgatca gtcttagaat aactttttct gtcgccataa
    20641 atttccattt gcttgtcata ttttaattta cggtccttaa aatcttggat agccttctta
    20701 ctttgtctca cgttacttct ttcttttcta aggttttttc ttgtctctac atcttgagtt
    20761 gtttcaattt cagacgtgag cgcatcattt ttatgaccta aatgcgtctc tatttgattc
    20821 agttcttcac ttgttaattc atgtccagat tcacgcttga tttcaggaat aatctcttca
    20881 gaaacgagtt gttcatataa tgccgttgat ttttcaatga cagactgact aaaacgcttc
    20941 gtattagcca gccactgaaa tgtatactta ttcgcattgg cttctatttt tgtgccatca
    21001 atataaatga catcctctgt aatgagttgt tcttctaata actgtgctct taaaccgaat
    21061 attat
//
LOCUS       DANHPA010000040        20741 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.040, whole genome shotgun sequence.
ACCESSION   DANHPA010000040 DANHPA010000000
VERSION     DANHPA010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 20741)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20741)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20741
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.040"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..854
                     /locus_tag="PTC28_001161"
     CDS             <1..854
                     /locus_tag="PTC28_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDK5716455.1"
                     /translation="NDTKDLLIVDSFERKKFAMYPDIFKHVKIDEYEFERSFNMDEVI
                     YLTYNNNALNSFVNSLFDDYGAIFGRMIKAQMRNYQIRGVLKIDTSKVGKSSEQDKVQ
                     EYVNKLLKVFDNNAVAVAPLTNNFEYQESNNANKGNAAPFSEIANLKKAMIDEVAKAL
                     GIPPSLIHGDMADLENAMESYIKFCIKPLLKKFEDEFNAKLIKKEDLLNGKCIKAISI
                     DKRDPLEMAEAIDKLVSSSTFTPNQVLILLGEDPSDDPEMDKYYITKNYTTSNQSSFK
                     GGETDED"
     gene            844..1566
                     /locus_tag="PTC28_001162"
     CDS             844..1566
                     /locus_tag="PTC28_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease ClpP"
                     /protein_id="HDK5716456.1"
                     /translation="MKINIKGAIVSNDDKWLYEIFGMDHTAPKDVIDALPKNNEDIEV
                     IINSGGGDVFSGSEIYTVLKEYQGKVTVKVHGVAASAASVIAMAGDHIEMSPTAQMMI
                     HNASTLTYGDNRKMDSSSKMLSSTDKGIANAYTKKTGMSEEEILNLMNDETWMNAQEA
                     IEKGFADAKMFDDVTPKIVASYGQMISEDAKKRITALMTQTPEVKIDINQIVDKVIEK
                     LDVKEKELKKPETKKGFGKFFF"
     gene            1595..2722
                     /locus_tag="PTC28_001163"
     CDS             1595..2722
                     /locus_tag="PTC28_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HDK5716457.1"
                     /translation="MVIKLSNEFITARQELVNAIKNGESEEVQAKAYENMLNELVEEA
                     KKQAKLEAEKVTDLTSADKQLNAADRKFYNEINKEVGYKEEKLIPQETIDRIFENLTT
                     AHPLLAAIGLKNAGLRLKFLKSETKGQAVWGKIYGEIKGQLDAAFSEETAIQHKLTAF
                     VVLPKDLTDFGPAWIERFVRTQIEEAFAVALEAAFLGGTGKDMPIGLNRQVQKGVSVA
                     DGVYPVKDVTSTLTFKDAKTTVLELTKVFKYHSTDEKGKAVVVKGNVNMVVNPSDAFE
                     IQAQYTHLNAQGVYVTALPFNLNIIESVAQEAGKVVTFVSGRYDAYLGGGIKVMKFEQ
                     TLALEDLDLYTAKQFAYGKARDNKVAALHKLSLATQAGSPS"
     gene            2791..3087
                     /locus_tag="PTC28_001164"
     CDS             2791..3087
                     /locus_tag="PTC28_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage gp6-like head-tail connector protein"
                     /protein_id="HDK5716458.1"
                     /translation="MISDEILKQFKSRMHIFHSAEDERLRNDLQISYEILQRDYGEFD
                     IFTNIMGKELVFERTRYVYNEQLQYFLKNFSTELVNFGLENVVMKEDFDGADKL"
     gene            3068..3430
                     /locus_tag="PTC28_001165"
     CDS             3068..3430
                     /locus_tag="PTC28_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716459.1"
                     /translation="MAQINYKRKKLQSGDFRTPATFHTYINRGPYPEDVELEQVYQCF
                     VETYSPSIKDMEILDVAGHLTGLTMVMRDPLQSYQPRNEHVVKIEDYRLEVNTFNIKA
                     VRLDTPERGFITLVLMQQ"
     gene            3427..3828
                     /locus_tag="PTC28_001166"
     CDS             3427..3828
                     /locus_tag="PTC28_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716460.1"
                     /translation="MSVEVKGISEVLKKVESKYGKRAMQQIADRALNKASDFVVSNLK
                     KEFESFKDTGASIEEMTKSKPYTKASDHSRAILIQWQGPMNRKNIIHLNEHGYTRDGK
                     SFTPRGFAVIAKTLAASEIIYRKITKKELSK"
     gene            3830..4225
                     /locus_tag="PTC28_001167"
     CDS             3830..4225
                     /locus_tag="PTC28_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716461.1"
                     /translation="MNILNLVKEIIMSDDQLQFYLQSRIYYYRVTENADVSKPFVVLK
                     PILDKPFDFVSDKYLSESYLIQVDVESTNHQITIDITKRIRYLLFANNLVQASSQLDE
                     YFESTKRYIMSRRYRGIPKNQYYKGEHIE"
     gene            4265..4945
                     /locus_tag="PTC28_001168"
     CDS             4265..4945
                     /locus_tag="PTC28_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDK5716462.1"
                     /translation="MGSYVAGFKRLHVGLFDEDAKKVLKKFIWEDENGGTVNMNVTGL
                     SPDMVDMYASNKRVWMKKQGTNEVKSDIDLFNIPSDDLNAVLGRSKDSNGSAWVGENT
                     RAPYVTIVGESEDGMTGEPVYCALLKGTLSLDSIEFKTRGEKAEAPETTKLTGDWMNR
                     KVEVDGKTAGYIYAYHEGSAGADEFLNKVFVGFDGTTTLSAATTITTPTDTPIATVTN
                     SNAASVLP"
     gene            5040..5501
                     /locus_tag="PTC28_001169"
     CDS             5040..5501
                     /locus_tag="PTC28_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015899760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig domain-containing protein"
                     /protein_id="HDK5716463.1"
                     /translation="MVRRLKLYTNGELKDTAEGEGRLTVSISGLEPATSYPAGIYQVC
                     FEENGKESEKVDSPAFTTKPILVTSVTFTPENLSLVAGDDDVAVATVTPSTASNSEVT
                     YTSDHPEIVTVDSEGGDLHAVAPGTATITATAKDSTHKTAHMTVVVTAAEE"
     gene            5609..5959
                     /locus_tag="PTC28_001170"
     CDS             5609..5959
                     /locus_tag="PTC28_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015365121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716464.1"
                     /translation="MIKFEITDKKTGKTSTYKKDGITIGEAEKFYETIEKMNKEAEKE
                     NATSKSIRKIERAFFVSLFEDQGLTEEDVLNNMTTRTYKEASNAIFREINAEDEEASK
                     VGTDEAGKTEKQSQ"
     gene            6001..6156
                     /locus_tag="PTC28_001171"
     CDS             6001..6156
                     /locus_tag="PTC28_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716465.1"
                     /translation="MEQYGWTLTEVKNQPYIELLTLLNSSEKEEMKEESEQKVYTGRE
                     LKYLFGS"
     gene            6170..11758
                     /locus_tag="PTC28_001172"
     CDS             6170..11758
                     /locus_tag="PTC28_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDK5716466.1"
                     /translation="MDEKLQGLTLELGLDTLGIQEGMKGLKRQLGVINSEMKANLSAF
                     DKSEKSMQSYETKINGLNQRLKVQKQMFNQAETELKQLNANYQSAKVNIKGVEKAYLD
                     LAEANKKNKAALDKSNMSLKESVSELKKSEAQYKRLNQRKNDAYQKLKLLKQAEKDLK
                     NSNSATTLELKRANEAVQKQIVKHKELVARYKNESLQIKKLREEHQKLSSTNQSVKDA
                     YDKTNIKLKQTQFEYKELNNTIKNHHSNLATAQKAVNNEKASLNGLERAIAKTTNEMK
                     AFNKEQLLASSHFNKKANEVDAMANTFNQKGDKMHSLGRNMTLGVTTPIALGFGQALK
                     TSADFEAQMSRVGAIAQASKQDLKAMTDQAIDLGAKTSKSANEVAQGMEDLAALGFNA
                     KQIMEAMPGVISAAEASGADMSTTAKVMASSINAFGLEASDASHVADLLAVAANESAA
                     DIQYMGDALKYAGPPAKTLGVTLEDTSAAIEIMSNSGLEGSQAGTALRASFIRLANPS
                     KATSKAMEKLGIHLSDAKGEFVGMGPLIGQFQKSLKGMTQEQKLAYIATITGNEAASG
                     FLALVEAGPDKINAYSKSLKNSDGASKKAAAQMKDNLKGALEQLNGAFESLSIQIGKD
                     LTPTIRKGAEWLTQFTEGFSKLPNWVRKGSAGLLLFGATIGPVLLAGGLLIRSIGSAA
                     KGYASLNRQMALNSTEAIINAKANEKAAGSILKNSKATKRTKGLFGNFGNILSIVTGR
                     FGGLAKVTKVGIKLFGKVGLPLTILTTLFGIAYEKMGWFRDGFKDMERIIGDVGSHIN
                     FDWIHDLGRSWNHFKTDIAKGLEEGALFKKIHKLFDGIHSLASKASDKVDVLGKGVSK
                     QTKKALSTYMKYADQSDKIFEKIRYNHGKISEKEADELIAINTKLSDELIKQLEKRKA
                     RELKIDEGVLKDTKVISDKRKKAILKKVEEEGNTRIQKAKELNAKIDKFENKALSDNK
                     LSEKERFELKILYTQRNELAVEELSKGEKEQQRILSRMSANRKAMSIEEASETIKESI
                     KARDKAKKEAKKRYDSRVDEINEMVGLSKDEKEKLLKEADDRYKEEKDKADKHHKDIL
                     DGVKQSNKDVEKEIDLSSGKVKSGFDKFWEEFKKGTSENWGKFTRDLNEGWGALVDTF
                     NDYGKSIQGVGDWFSDLPEKTSKWFEKTSDEISNYTSDMYNKAKTKFENMKDSAWENA
                     ESIYNGFKDWLGRTLEWIRGFGSDIEEAALDLGKGVANKAIGGLNGMIGGINKISQAI
                     TDKNLIEPIPTLSTGTYSGTSLATDSEGGLMSPTLAIVNDRGSGNAPGGGVQEVIHRA
                     DGTFHIPKGRDVPVLLGVGDSVINAHDTYRMQRMGILPKFHTGTKKKNWFDEIKEKLG
                     KKVGNFGAKAKDTAHNITDGAEKIVDAVTDKIKDGASWLGDKIGDVWDYVQHPSKLIE
                     KVMSSLDINFGSGNNATVKMAKGAFIHLKNKLVDKVKSWFDDFGGGGDGHYLFDFPVW
                     QQFGRYTGGLNFNGGRHYGVDFGMPAGTSIYAVKGGIADRVWTDFGGGNSIQIKTGAN
                     EWNWYMHLSKQIARQGQRIKAGQLIGLSGATGNFVKGAHLHFQLMRGSHPGNDTAVDP
                     IQWLKSLKGAGGSGGDGYTNARNAILKAQAILGGPFRSSYITDEMLRVAKRESNYTSD
                     AVNNWDINAQRGTPSKGMFQMIEPSFRTYALNGHGNMLNSVDEAIAAIRYIVGKWVPI
                     MGSWRAAFKRAGDYAYENGGLSTTHKLAQISEGNKPEMIVPLTKRTRAIQLIEQAMRY
                     VGMESGSTHMTFNHDNSLVESLLKQLLLLSDENNKLTEKLIYILSQPSGKPDLKGAEK
                     LLSALAGNRSNQLSYMQGGD"
     gene            11848..12585
                     /locus_tag="PTC28_001173"
     CDS             11848..12585
                     /locus_tag="PTC28_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001190534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail family protein"
                     /protein_id="HDK5716467.1"
                     /translation="MDFPNANENDVTIAGVDGVLPGSLSYAPFNLILRFGLDAYDLEE
                     FWLYEHMLRSKFSRRKPFTIIHSQLPGVKFDISKCDISKNIKDGSSCEFEVTCKVYKG
                     YYESVYETDTEFKMSEGWMLESGIPLDFTPKYKHKSKSFVIWNGSTDTIDPRMHHKLK
                     IYIQLTASKGFELINHTTGDVFKYKKSIEKDELVLSSVYAYRNGERCGIDTNRGVITL
                     APGKNDFEIKGNVSIEKVQFKFPFIYR"
     gene            12586..14160
                     /locus_tag="PTC28_001174"
     CDS             12586..14160
                     /locus_tag="PTC28_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001579179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDK5716468.1"
                     /translation="MIELIHLAVQNIENTIAENLLEVDYGSFKDTYSKNEARMIEFDF
                     YKTESNAVIFQLLICENFILYQGTRFVIKQAVPKIAEGKTVVSITAYHVMFEFQGHYI
                     DAPEDENDEPDEKEKTYLLKEALDIVFRDQRQTLKFTYKIHGDFTKRKAAEVFGQNGI
                     EAINNIAEAFDCVIYPKDSEINFYHPDLFYKSTEEIIRYRYNTDSIQASVSTLELKTA
                     VKAFGKKLEKKDTKNYSPLKPEDFTYSSDFDKEKTWGTDVVGGRATVSVKCKFGNETI
                     RYTIKKGPNGGLFDAFIDGQKIGTFSCWAKDVESKTIDLKKNVSKGVHSLEFVFIGAD
                     PEHAPPKKKKARFLVGTSERNVINLIANLRGEDLYSAVVDYKAESSKRFGVKYASTLT
                     NDNISDVKELEKWAASQIQSEPKTELEVNYISKTKLTPRDKVYFVHETMGYNTELKVI
                     RLERGHPLANSIDTVSFSNNTVDMVQIQRSLNKRLKKQDNLFNYQSKVLNKIQSKSNL
                     KPFTTETIGSVLDDED"
     gene            14147..14347
                     /locus_tag="PTC28_001175"
     CDS             14147..14347
                     /locus_tag="PTC28_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002504466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716469.1"
                     /translation="MTKIKALYENNEQFYPLTHVEGVKGLKNATEEKAGLMSKEDKRK
                     LDNFNEAGSSNLGSVFYKEIRK"
     gene            14354..14974
                     /locus_tag="PTC28_001176"
     CDS             14354..14974
                     /locus_tag="PTC28_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002494385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716470.1"
                     /translation="MPNITKARTITYDGEEVYVRTHIDVVDGLDKSMLLTPELIEKIN
                     DIDGSDIPDSLTNATPEKAGLMSAEDKRRLDELKTNSNPYNKTVSDSTTTASNTVIAA
                     DINKWPNNTQVVNLSKRVSECRNGIVLVWRSDATDDFYHYQYVPKNHVKTHSAAKIVH
                     LIPTNSANEFCTKTVLIRDNVVTGTDDNHNRTTKANKVRLHEILEY"
     gene            14986..16017
                     /locus_tag="PTC28_001177"
     CDS             14986..16017
                     /locus_tag="PTC28_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002493689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HDK5716471.1"
                     /translation="MNLITDLSNKAGAELRTQLIYNFKEIQKALKVQDSKVIENKINQ
                     KVSKYEYDMKREIRAIVLPEMSPLQITDDYAKSLTDLKGEQHESLKGRLDADLKYIAK
                     KSMKTSIDDRFIVTENGTVFADYLSMSNTIKSIKKIGVIGDSVAKGSRATKNFGKYLA
                     EMLGATVQNEGVSGATMSTVKANSIYEQAAKIRNKDLVIIQGTDDDWLYNGSAGVSIG
                     TNKTNVKTFYGAFCKTVELIKTNNPHAKIIVMTATRQLPVNGTTIRRKDTDKNSIGLT
                     LEDYVNAQVLACTELNVPVFDAYHTNLLDPYNPAFRVKNMVDGLHPNEKGHEVITHEL
                     IKNYFYFYG"
     gene            16034..17305
                     /locus_tag="PTC28_001178"
     CDS             16034..17305
                     /locus_tag="PTC28_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002484785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate upper protein"
                     /protein_id="HDK5716472.1"
                     /translation="MANQDLFYDITKQGTEQEKQQHLISRVGDGGLKTVTVTVWSNGT
                     PYNITGLTPVFEGVKPDGQRIIDTRGAIVLDPVNGVFRYTFPHQASTAEGEYKQAFFK
                     LKRGEQTDSTLEIKINVLKNMVEFGINSESYYTEYQQKVSELEEKISAYLEELKTKAA
                     GTQTQVEANANLAKALKQQLDLIQSIANERELMTRGDFNEAINTVNNTVDNISSNFNT
                     FKRDSTEELKRFKSEVTGVKTGVLDDVANITKSGVYYFDGTTRNVPTRNTNNSNGYIQ
                     AVMKDENNGMITMLGAGYSIEKYRGQLHGRWVSSVPVKLWSGNLIKGQTATLAGNCHD
                     FGNLLIEVGYTTNSFATELIGIPSNGGRVYLNNIGMRSSGDGFKNGHLDEVVIQIKDD
                     THILLEKTLRATGDEQATNSDAYISAIYGIY"
     gene            17376..19376
                     /locus_tag="PTC28_001179"
     CDS             17376..19376
                     /locus_tag="PTC28_001179"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012863.1,HMM:NF022117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BppU family phage baseplate upper protein"
                     /protein_id="HDK5716473.1"
                     /translation="MNYKNKDIHANINELGVDIGYIGANFYSKDVGTASIRINIFWNG
                     QPFDLSNANYQPQLNLFCEDGSVFMDEPLEIISPYSGLIQYKVTDKVIRHSGKVKAKL
                     FLLNENTSIHALNFMFNIVDSGIDQTISKEVNVDLVYTAIKDALKSKLFDMDELKKVM
                     SDVVLDNKDNLKLDEPKKSSMFEGKTGVFVGDSITEKNFRTTTNYHEFIASRTGLNVI
                     NMGISGTGYQDRKNVALQIKEQPDFICVFLGTNDYGLVGDKTNPLGTVEERDYRTVAG
                     SIYFTLLQLTNHFPNTPIVVMTPLPRIECYPLKEVANDAGYTLGQLVDVIKNISKLFG
                     LPVLDLYHESNLRVWEPAVNKTFFAYEEGQEDGLHPNEKGHEFISNSIQSFLEKYAVS
                     PKFENKVDLPPDQVLENGTVVKHLYPTGIFWKENQSFIINFDESEISLDNKKILKIES
                     QKASILNASGTLQNSPYWYTIPNNTDEYNRVADVTQFTDSLTKTGYTTERGFEYLPEL
                     LKVTYADDANNSVVAEPNSNSTEAEDTSEVAASNDEISNDNIAPTEEAVNPIDNGDGT
                     YIASVVPNRIFRDPSGLFGIAINRTALNLEDKSVVKIELGNEVLLNPEYVPNTIYWSG
                     VNGRSTDEVERFISHLVIRGERNPGSAQEFKNQAIKITYRNN"
     gene            19388..19819
                     /locus_tag="PTC28_001180"
     CDS             19388..19819
                     /locus_tag="PTC28_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HDK5716474.1"
                     /translation="MMISFTETEVFKTFFYAGEMKLLYFLMLLMALDVITGLAKAVKN
                     KKLWSRKSMFGYARKMLIFCIVILANIIDQILNANGGIVMMTLFFYITNEGLSIVENC
                     AEMGVLIPKQIAEKLAVIGNDDHKSIIHELKEEMSDTTKKR"
     gene            19832..>20741
                     /locus_tag="PTC28_001181"
     CDS             19832..>20741
                     /locus_tag="PTC28_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HDK5716475.1"
                     /translation="MAKEKIGTWNGVPVYTDFLPIGTRRSGQRLVSGNPKFAVFHDTG
                     NRDSTAQNNVDYYRNTYNIDWAYTASAHVFVDDKECIICIPVTEKAWHVLYDTPIDND
                     WYGDDANDIAFGLEACYFSDEGRTLKSLDNACRIMGALCNSWDINPRNEMPGHQDIQF
                     DKQDPGNILEAAGYGRHDMHIIDDLVVKYMKGDSPAPKVAKTVSKPKQGKPPKTVWAW
                     HGIFTASDDNDDAIVVRRAFGMDAEEVDSGSWIYPGEYVEFDQVIKDVKNKMWWIRFK
                     YQADGANKKDNFYMPIGEITDKDGKLL"
BASE COUNT         7533 a         3011 c         4287 g         5910 t
ORIGIN      
        1 tgaatgatac caaagatttg ttgattgtag atagttttga gcgcaaaaag tttgctatgt
       61 atcctgatat tttcaaacat gtaaaaattg atgaatacga atttgaacgt tcgtttaaca
      121 tggatgaagt tatttatctc acatacaaca acaatgcatt gaattcgttt gtgaatagtt
      181 tgtttgatga ttatggtgct atttttggac gaatgattaa agcgcagatg cggaattatc
      241 agattcgtgg tgtgcttaaa attgacactt caaaagttgg aaaaagtagt gagcaagata
      301 aggttcaaga gtatgttaat aagctactta aagtatttga taacaatgct gttgccgttg
      361 cacctttaac taacaatttt gagtaccaag aatcaaacaa cgcaaacaaa ggtaatgccg
      421 caccttttag tgaaattgcc aacttgaaaa aggcaatgat tgatgaggtt gctaaagcgt
      481 taggtattcc accctctttg attcatggtg atatggccga tttggaaaat gccatggaat
      541 cctatattaa attctgtatc aaacccttac ttaaaaagtt cgaggatgag tttaacgcta
      601 agttgattaa aaaagaagat ttactaaacg gaaaatgtat taaagcgatc agtatagata
      661 aacgcgatcc gttagaaatg gcagaagcta tagataaatt agtatcttca agcacattca
      721 caccaaatca agtgttgata ttattaggtg aagatccgtc agatgaccct gaaatggata
      781 aatactatat tactaaaaac tatacaactt ctaatcaatc atcttttaaa ggaggtgaga
      841 cagatgaaga ttaacattaa aggtgcgatt gtttcaaacg atgacaaatg gctttatgaa
      901 atttttggaa tggatcatac agccccaaaa gatgttattg atgcgctgcc aaaaaataac
      961 gaagatatag aggttatcat caatagcggc ggtggagatg tttttagcgg aagcgaaatc
     1021 tatactgtgc ttaaagaata tcaaggcaag gttactgtta aagttcatgg cgttgctgca
     1081 agtgctgcat cagttattgc gatggcaggt gatcatattg aaatgagccc aactgcacaa
     1141 atgatgattc ataacgcgag tacattaaca tatggtgata acagaaagat ggattcctct
     1201 tctaaaatgt taagcagcac agacaaaggc atcgcgaatg cgtacacgaa aaaaacaggt
     1261 atgtctgaag aagaaatttt gaatctgatg aatgacgaaa cttggatgaa cgcacaagaa
     1321 gcgatagaaa aaggttttgc tgacgctaaa atgtttgacg atgttacacc gaaaatcgta
     1381 gcgagctatg gtcagatgat ttctgaagat gcgaaaaaac gcatcacagc actgatgact
     1441 caaacgccag aggtcaagat tgatattaat caaattgtgg acaaagtgat tgaaaaatta
     1501 gatgtaaaag aaaaggaact taagaagcct gaaacaaaga aaggttttgg taagttcttt
     1561 ttttaataca aatttttaag gagggtcatt taaaatggtc attaaattat caaatgaatt
     1621 tattacggca cgtcaagaat tagttaacgc tattaaaaat ggcgaatcgg aagaagtaca
     1681 agcaaaagca tatgaaaata tgttaaatga attagttgaa gaagcgaaaa aacaagcaaa
     1741 attagaagct gaaaaagtga ctgatttaac tagtgcagac aaacaattaa atgctgcaga
     1801 tcgcaaattt tacaacgaaa ttaataaaga agttggatac aaggaagaaa agttaattcc
     1861 acaagaaacg attgaccgca tttttgaaaa tttaacaact gcacatccgt tattagctgc
     1921 tattggatta aagaatgcag gtttacgttt aaaattctta aaatcagaaa cgaaagggca
     1981 agcagtatgg ggtaaaatct acggcgaaat taaaggtcaa ttagatgctg cgttcagcga
     2041 agaaacagct attcaacaca agttaacagc ttttgttgtt ttacctaaag acttaacaga
     2101 ttttggccct gcatggattg aacgttttgt tcgtacgcaa attgaagagg cttttgccgt
     2161 tgcgttagaa gcagcatttt taggcggtac aggtaaagat atgcctatag gtttaaatcg
     2221 ccaagtacaa aaaggcgtat cagttgctga tggtgtttat cctgtgaaag atgtaacatc
     2281 tacactcaca tttaaagatg ctaaaacaac agtattagaa ttaacaaagg tatttaaata
     2341 tcactcaact gatgaaaaag ggaaagccgt tgtcgttaaa ggtaacgtga atatggtcgt
     2401 taacccaagc gacgcatttg aaattcaagc tcaatataca cacttaaatg cgcaaggtgt
     2461 ctatgtgaca gcattaccat tcaacttaaa catcattgag tctgttgctc aagaagccgg
     2521 taaagttgtg acgtttgttt ctggccgcta cgatgcatat ttaggcggtg gtattaaagt
     2581 tatgaaattt gaacagactt tagctttaga agatttagac ttatatactg ctaagcaatt
     2641 tgcatatggt aaagcgagag ataataaagt ggcggcattg cacaaattat ctttagctac
     2701 acaagcagga tcaccctcgt aaaccccgaa aagttgaagt aacgccgaac gcacgttcaa
     2761 taaatatttc ggcagaatag gggcgatgag atgattagcg atgagatttt aaagcaattt
     2821 aaaagtcgca tgcatatatt tcattcagct gaagatgaaa gacttagaaa tgatttgcaa
     2881 atatcgtatg aaattttgca aagggattat ggagagtttg atatttttac aaatatcatg
     2941 ggaaaagagt tggtttttga acgtacgaga tacgtttata acgaacaact tcaatatttt
     3001 cttaaaaact tttcaacaga attggttaat tttggattgg aaaatgtggt aatgaaggag
     3061 gattttgatg gcgcagataa actataaacg caaaaaattg caatctggtg actttcgtac
     3121 tcctgccaca ttccatacgt atattaaccg aggtccgtat cctgaagatg ttgaattaga
     3181 acaagtctat caatgttttg ttgaaacata ttcaccttca atcaaggata tggaaatttt
     3241 agacgttgca ggtcatttaa ctggtctcac aatggtcatg agagatccgc ttcaaagtta
     3301 tcaacctaga aatgaacatg ttgtaaaaat tgaagattat agattagagg ttaatacatt
     3361 taacatcaaa gcggtgcgtt tagatacgcc tgaaagaggt tttatcacat tggtgttgat
     3421 gcagcaatga gtgttgaagt taaaggtatt tctgaagtat tgaaaaaagt agaatctaaa
     3481 tatggaaaac gtgcaatgca acaaattgct gatagggcgt taaataaagc gtccgatttt
     3541 gttgttagta acttaaaaaa agaatttgaa agttttaaag acactggtgc aagtattgaa
     3601 gaaatgacaa aatcaaaacc ttacacaaag gcaagtgacc atagtagagc gattttaatt
     3661 caatggcaag gtccgatgaa tagaaaaaat attattcatc ttaacgaaca cggatatact
     3721 cgtgatggga aatcatttac acctcgagga tttgccgtaa tcgcaaaaac tttggctgca
     3781 agtgaaataa tctatagaaa aattacgaaa aaggagttga gcaaataaca tgaatatact
     3841 taaccttgta aaagaaatta ttatgtctga tgatcaactc caattttatt tgcaatcaag
     3901 aatttactat tatcgagtca ctgaaaatgc ggatgtgtct aaaccgtttg tcgttttgaa
     3961 gccgatttta gataaacctt ttgattttgt atcagataag tatctgagcg aatcatattt
     4021 aatacaagtt gatgttgagt cgacaaatca tcaaataact atcgatataa ctaagcgtat
     4081 tagatattta ctttttgcta acaatttggt acaagcatca agtcagttag acgaatactt
     4141 tgaatcaacg aaaaggtata tcatgtcgag aagatacaga ggcataccaa aaaatcaata
     4201 ttacaaaggt gagcacatcg agtagatgtg cttttttaat gcaaaaatta ggaggaattt
     4261 aattatggga tcatacgtag caggatttaa aagattacat gtaggtttgt ttgatgagga
     4321 tgcaaagaaa gtcttaaaaa aatttatttg ggaagatgaa aacggtggta ctgtcaacat
     4381 gaacgtaaca ggtttatcgc ctgacatggt agacatgtac gcatcaaata aacgtgtttg
     4441 gatgaaaaaa caagggacga atgaagttaa gtctgatatc gatttattca atatcccatc
     4501 tgatgatcta aatgctgtat taggacgtag taaagattca aatggttctg cttgggtagg
     4561 agaaaacaca agagcgccat atgtaacaat tgttggtgaa tccgaagatg gaatgacagg
     4621 agaacctgta tactgtgcat tattgaaagg gactttaagc ttagattcaa ttgaatttaa
     4681 gacacgtggt gaaaaagcag aagcacctga aacaactaag cttactggtg actggatgaa
     4741 tcgaaaagtt gaagttgacg gaaaaactgc aggatatatt tatgcatatc atgaaggttc
     4801 agctggagca gatgagtttt taaataaagt ttttgtaggt tttgatggca caactacatt
     4861 atctgcagca actacaatta caactcctac tgatacacct attgcgactg tcacaaattc
     4921 taatgcagca agtgttttac cctaatcctc cccgaaacgt agtattgatt cctcacgaag
     4981 aatcaattga aatttctgcg gaataggggc tatcagaatt ttatttagga ggtcttgaca
     5041 tggtaagacg tttaaaattg tatacaaatg gcgagttgaa agatactgca gaaggagaag
     5101 gacgattaac tgtaagtatt tcaggtttag agcctgcaac atcctatccg gccggtatct
     5161 atcaagtttg ttttgaagaa aatggtaaag aatccgaaaa ggtagatagt cctgcattta
     5221 cgacaaagcc aattctagta acaagtgtta cgtttacacc agagaatctg tcgttagtcg
     5281 caggtgatga tgatgtggct gtagcaacgg ttacacctag cacagcttca aattctgaag
     5341 tgacatatac aagtgatcat ccagaaattg ttactgtaga cagtgagggt ggagatttac
     5401 atgcggtagc tccaggcaca gcaactatca cagcaacagc aaaagatagt acacacaaaa
     5461 ccgctcatat gacagtcgta gtaacagcag cagaagaata aacattttag tgaactatac
     5521 agaattacca gatagttaaa attgaaaaat taggcgcagt taaattgctg cgtctttttt
     5581 atttgaatga aaaaggagaa taacaattat gattaaattt gaaattactg acaaaaaaac
     5641 tggcaaaact tcaacttata aaaaagacgg aattacaatt ggtgaagctg aaaaattcta
     5701 tgaaactatt gaaaaaatga ataaggaagc tgaaaaagaa aatgcaacat cgaaaagcat
     5761 tcgtaaaatt gaacgtgctt tctttgtgag tttgtttgaa gatcaaggat taactgaaga
     5821 agacgtttta aataatatga caacacgcac atataaagaa gcatctaatg ccatttttcg
     5881 tgaaatcaat gcagaagatg aagaagcgtc aaaagttgga acagatgaag cgggaaagac
     5941 agaaaaacaa tctcaataaa agatatttta tcgaatctta agcaaataca acgcttttgt
     6001 atggagcaat acggctggac attaacagag gttaaaaatc aaccttacat cgaattatta
     6061 acacttctta attcaagtga aaaagaagaa atgaaagaag aaagcgaaca aaaagtatac
     6121 acaggtagag aattgaaata cttatttggt agctagaaag gaggttaata tggatgagaa
     6181 attgcaaggt ttaaccttag aattaggact tgacacatta ggcatacaag aaggaatgaa
     6241 aggtctcaaa cgtcagcttg gtgttattaa tagtgaaatg aaagcaaacc tttcagcatt
     6301 tgataaatct gaaaaatcaa tgcaaagcta tgaaactaaa attaatggtt tgaatcaacg
     6361 tcttaaagtt caaaaacaaa tgtttaatca ggccgaaact gagttgaagc agttaaatgc
     6421 aaattatcaa agtgcaaaag ttaatattaa gggcgttgaa aaggcctatc ttgatttagc
     6481 tgaagcaaat aaaaagaata aagctgcatt agataagtca aacatgagtt tgaaagaaag
     6541 tgtttcagaa ctaaaaaaat ctgaggctca gtataaaaga ttaaatcaac gcaagaacga
     6601 cgcttatcaa aaactaaaac tgcttaaaca agcggaaaaa gatttgaaga atagtaattc
     6661 tgcaacgaca ttagaattaa agcgtgcaaa tgaagctgtg caaaaacaaa ttgttaagca
     6721 taaagagcta gtagcacgtt ataaaaacga aagtctacaa attaaaaaac tccgtgaaga
     6781 acaccaaaag ctttctagta cgaatcaaag tgttaaggat gcttatgata agacaaatat
     6841 taaactaaag caaacacaat tcgaatataa agaacttaat aacacgatta agaaccatca
     6901 tagtaattta gcaacggcac agaaagctgt aaacaatgag aaagcttcat taaatggtct
     6961 agaacgtgcc attgctaaaa ctacaaatga gatgaaagct tttaataaag agcaattact
     7021 agccagcagt cattttaaca aaaaagcaaa cgaagtagat gctatggcaa atactttcaa
     7081 ccaaaaaggc gataaaatgc attctttagg tcgtaatatg actttaggtg ttacgactcc
     7141 aattgcatta ggcttcggac aagcattaaa aacaagtgct gattttgaag ctcagatgtc
     7201 aagggttggt gcaatcgctc aagcgagcaa gcaagatttg aaggctatga ctgatcaggc
     7261 tatcgattta ggtgcaaaaa caagtaaaag tgccaatgaa gtagctcaag gcatggaaga
     7321 cttagctgcg ttaggattta atgctaaaca aataatggaa gcaatgcccg gagtgataag
     7381 cgctgctgaa gcaagtggtg cagatatgtc aactacagct aaggtaatgg cctcatcaat
     7441 taatgctttt ggattagaag cttcagatgc tagtcatgta gcagacttat tggcagttgc
     7501 agcaaatgaa agtgctgctg acatacaata catgggtgat gcgcttaaat atgcaggacc
     7561 tccagctaaa acgctaggcg tcactcttga agatacttca gcagctatag agatcatgtc
     7621 taactcaggt cttgaagggt ctcaggcagg taccgcactt agagcttcat tcattcgcct
     7681 ggctaatcca tcaaaagcga cttcaaaagc gatggaaaaa cttggcattc acttatctga
     7741 tgctaaaggt gagtttgttg gaatggggcc tttaattggc cagtttcaaa aaagtttaaa
     7801 aggaatgaca caagagcaaa aattagcata tattgctacg attactggaa atgaggcagc
     7861 tagtggattt ttagcattag tagaagcagg acctgataag attaatgctt atagtaaatc
     7921 tttaaaaaat tctgatggcg cgagtaaaaa agctgcagct caaatgaagg acaatttgaa
     7981 aggggcatta gagcaactca atggtgcgtt tgaatcactg tctattcaaa tcggaaaaga
     8041 tttaacacct acaattcgta aaggcgctga atggcttaca caatttacag agggcttttc
     8101 taaattacct aattgggtac gaaaaggttc ggctggttta ttattatttg gcgcgacaat
     8161 tggtccagtc ttattggcag gtggattatt gattagatct ataggtagtg ctgcaaaagg
     8221 atatgcttct ttaaacagac aaatggcatt gaatagtact gaggcaatta taaatgcaaa
     8281 agcgaatgaa aaagcagcag gttctatact aaaaaatagt aaagctacga agcggactaa
     8341 aggattattc ggaaatttcg ggaatatctt atcaattgtg actggtcgat ttggtggctt
     8401 agccaaagtt actaaagtag gaattaaact tttcggtaag gtcgggttac ctttaacaat
     8461 tttaacgaca ctttttggta tagcttatga aaaaatgggt tggtttagag atggctttaa
     8521 agatatggag cgtattattg gcgatgtcgg cagtcatatt aactttgatt ggattcatga
     8581 cttagggaga tcatggaatc actttaaaac tgatattgct aaggggttag aagaaggtgc
     8641 gctttttaaa aaaattcaca aattatttga tggtattcat tcactagcat caaaagcatc
     8701 agataaagta gacgttttag gtaaaggtgt atccaaacaa acaaaaaaag ccttatctac
     8761 ttatatgaaa tatgcagatc aatcagataa gatttttgaa aaaatcagat ataatcacgg
     8821 aaagatttct gaaaaagaag cggatgagct tatcgctatt aacacaaaat tgtctgatga
     8881 gctaataaag cagttagaaa aaagaaaagc tcgagaatta aaaattgatg aaggtgttct
     8941 aaaagatact aaagttattt ctgataaacg taaaaaagct atattaaaga aagttgaaga
     9001 agaaggtaac acgagaattc aaaaagctaa agagctcaac gcaaaaattg ataaatttga
     9061 aaataaagct ttgagtgaca ataagcttag tgaaaaagaa agatttgagt tgaaaatact
     9121 ttatacacag cgcaatgagt tagctgttga agagctttct aaaggcgaaa aagagcaaca
     9181 acgtatactt tctcgaatgt ctgcaaacag aaaagcgatg tcaattgaag aagcttctga
     9241 aacaattaag gagtcaataa aagcgagaga caaagctaaa aaggaagcaa agaaacgtta
     9301 tgattctaga gttgatgaaa tcaatgaaat ggtaggtttg tcaaaggatg agaaagaaaa
     9361 actcttaaaa gaagctgacg atcgatataa ggaagaaaaa gataaagcag acaaacatca
     9421 taaagacatt ttagatggtg tgaaacaatc gaataaagat gttgaaaaag aaatagattt
     9481 gtccagcggc aaggttaaat caggatttga taagttttgg gaagaattta aaaagggaac
     9541 aagcgaaaac tggggtaaat ttactcgtga tttaaatgaa ggctggggcg cactagttga
     9601 tacgtttaat gattatggta aaagtattca aggagttggc gattggttta gtgatttgcc
     9661 agaaaaaact tcaaaatggt tcgaaaaaac ttctgatgaa atttcgaatt acaccagtga
     9721 tatgtacaac aaagcaaaaa ctaaattcga aaacatgaaa gatagtgcat gggaaaatgc
     9781 agaatctatt tataatggct tcaaagactg gttaggtcga actttagaat ggattcgtgg
     9841 tttcggttct gacattgaag aagccgcgct tgacttaggt aaaggcgttg ctaataaagc
     9901 aatcggtggc ttaaatggta tgattggtgg catcaataaa atatctcaag caattacgga
     9961 taaaaacctg attgaaccaa ttccaacatt atcaacaggc acatacagcg ggacctcttt
    10021 agcgactgat tcagaaggtg gattaatgtc accaacatta gcaattgtaa atgacagagg
    10081 ttcaggcaac gcacctggcg gtggtgtgca agaagttatc catcgtgctg atggcacttt
    10141 ccacatccct aaaggtcgag atgtacctgt gcttttaggt gttggcgaca gtgtcattaa
    10201 cgcacatgat acgtatagaa tgcagcgtat gggaattcta cctaagtttc acactggcac
    10261 taaaaagaaa aattggtttg atgaaatcaa agaaaaactc ggtaaaaaag ttggcaattt
    10321 cggggctaaa gcaaaagaca cagcacataa cattactgat ggcgcagaaa aaattgtcga
    10381 cgcagtgact gataaaatca aagatggtgc ctcgtggtta ggcgataaaa ttggtgacgt
    10441 ttgggattat gtacaacacc cgagcaaatt aatcgaaaaa gttatgtcat ctttagacat
    10501 taattttggt agtggtaata atgctacagt aaaaatggcc aaaggtgcat tcatacacct
    10561 taagaataaa ttagtagaca aagttaaatc gtggtttgat gattttggtg gtggcggtga
    10621 tggtcattac ttatttgatt ttccagtatg gcaacaattc ggtcgatata ctggtggttt
    10681 gaattttaat ggaggtcgtc actatggtgt tgacttcggt atgccggcag gaacaagtat
    10741 ctatgctgtt aaaggtggaa ttgctgaccg tgtatggact gatttcggtg gaggtaactc
    10801 tattcaaatt aaaactggtg caaacgaatg gaactggtac atgcatttgt caaagcaaat
    10861 tgcaagacaa ggacaacgca tcaaagctgg ccaattgata ggtttatctg gtgctacagg
    10921 taactttgta aaaggtgctc acctgcattt tcaattaatg cgtggttcac atcctggaaa
    10981 cgacacagcc gttgacccga ttcaatggct aaagtcactt aaaggtgctg gaggttctgg
    11041 cggcgatggt tatactaatg cacgtaatgc cattttaaaa gctcaagcta tactaggagg
    11101 accgtttaga tcgtcctata ttacagatga aatgctaaga gtggctaaac gtgagtctaa
    11161 ctacacatct gatgcagtaa acaattggga tataaatgct cagcgaggaa cgccttcgaa
    11221 aggtatgttt caaatgattg agccatcatt cagaacctat gccttaaatg gtcatggtaa
    11281 tatgttgaat tcagtggatg aggctatagc tgcaatacga tatatcgttg gtaaatgggt
    11341 gccgattatg ggaagctgga gagcagcatt taaacgtgca ggtgattacg catatgaaaa
    11401 tggcggatta tctacaacac ataaattagc ccaaatcagc gaaggtaata agccggaaat
    11461 gattgtgcca ttaacaaaac gtacacgtgc gattcaatta attgaacaag caatgcgcta
    11521 tgttggtatg gaatcaggtt caactcacat gacatttaat cacgacaact cattagtaga
    11581 atcattgtta aagcaattgc tacttttatc agatgaaaac aataaattga cagaaaagtt
    11641 aatttacatt ttaagtcaac ccagtggaaa acctgatttg aaaggtgctg aaaaattgct
    11701 ttctgctctg gcaggcaata gaagtaatca acttagttat atgcaaggag gcgattaaat
    11761 ttgtatgaac gatggcttaa aattattgat aatggcaagg aggagttgat aaacgagtca
    11821 gctcctttct tttttctaga tgcaaacatg gactttccta atgctaatga aaacgatgtt
    11881 actattgctg gtgttgatgg tgtgttacca ggtagtttat cttatgctcc gtttaattta
    11941 atattgcgat tcggtttgga tgcttacgat ttagaggaat tttggttata cgagcatatg
    12001 ttaaggtcta agtttagtag aagaaagcca ttcacaatca tacattcgca attgccaggt
    12061 gttaaatttg atatatcaaa atgtgatata tctaaaaata ttaaagacgg ttcatcatgt
    12121 gaatttgaag tcacttgcaa agtttataaa ggttattatg aatctgttta tgaaactgat
    12181 actgagttta aaatgagtga aggttggatg cttgaaagtg gcatcccttt ggactttacg
    12241 ccgaaataca aacacaaatc aaaaagtttt gtgatatgga atggttcaac tgatactatt
    12301 gatccaagaa tgcatcacaa gttaaaaatt tatattcaac tgacagcatc aaaaggattt
    12361 gagttaatca atcatacaac tggtgatgta ttcaaataca aaaaatcaat tgagaaggat
    12421 gaattagtct taagcagtgt gtatgcatat cgtaatggtg aaaggtgtgg cattgacaca
    12481 aatagaggtg tcattacttt agcgcctggc aaaaatgatt ttgaaataaa aggtaatgta
    12541 tctattgaaa aggtgcagtt caaattccct tttatttaca ggtaggtgat tgaattgatt
    12601 catttagctg ttcaaaacat cgaaaatacg attgcagaaa atttgttgga agtagattac
    12661 ggaagcttta aagacacgta tagtaaaaat gaagcccgaa tgattgaatt tgatttttac
    12721 aaaacggaat caaatgcagt tatctttcag ttactaatat gtgaaaattt cattctatat
    12781 caaggtacac gttttgtgat aaaacaagca gtaccaaaaa ttgctgaagg taagacggtt
    12841 gtatccatta ccgcttatca tgtcatgttt gagtttcaag gtcactatat agatgcacct
    12901 gaagacgaaa atgatgaacc tgatgaaaaa gaaaagacgt atttattaaa agaagcttta
    12961 gacattgttt tccgtgatca acgtcaaact ttaaaattta cgtataagat acatggtgat
    13021 ttcactaaac gtaaagctgc tgaagttttt ggccaaaatg gtattgaggc tattaataat
    13081 attgctgaag catttgattg tgttatctat ccgaaagact cagaaatcaa tttttatcat
    13141 cctgatttgt tttataaatc aactgaagag attattcgat atagatataa tacagattca
    13201 atacaagctt cagtaagtac gttagagtta aaaacagccg ttaaagcatt tggtaaaaaa
    13261 ttagaaaaga aagatacaaa aaactactct cctttaaagc ctgaagactt tacttattca
    13321 tcagatttcg acaaagaaaa gacatgggga actgatgttg taggtggtag agccactgta
    13381 agcgtgaagt gcaaatttgg taacgaaacc attagatata cgattaaaaa aggacctaat
    13441 ggaggactgt ttgatgcatt tattgatgga caaaagattg gcacatttag ctgttgggct
    13501 aaagatgttg aatctaaaac aatagattta aaaaagaatg tgtctaaagg tgtacacagt
    13561 ttagagtttg tgtttattgg tgctgatcct gaacatgcac cccctaaaaa gaaaaaagca
    13621 agatttttag taggaacgag tgaaagaaac gttattaatt taatcgctaa tttaagagga
    13681 gaggatctat atagtgctgt tgtagattat aaagcagaaa gtagcaaacg cttcggtgtt
    13741 aaatatgcaa gtacccttac aaatgataat atttctgatg taaaagaatt agaaaagtgg
    13801 gcagcttccc agatacaaag tgaacctaaa acagaattag aagttaacta tatatcaaag
    13861 acaaagctaa cgccacgtga caaagtgtat tttgtacatg aaactatggg ttataacact
    13921 gaattaaaag taattcgatt agaaagaggt catccgttag ctaactcgat tgatactgta
    13981 tcatttagca acaacactgt tgatatggtt caaattcaaa gatctttaaa taagcgattg
    14041 aagaagcaag ataatttatt caactatcaa agtaaggtcc tcaataaaat ccagtctaaa
    14101 agtaatttaa aaccgtttac tacagaaacg attgggagtg tgttagatga cgaagattaa
    14161 agcgttatat gaaaataatg aacagtttta tccgctaaca catgttgaag gggtgaaagg
    14221 attaaaaaat gcgactgaag aaaaggctgg attgatgtct aaagaagaca aaagaaaact
    14281 tgataatttt aatgaagcag gctcgagtaa tctcgggtct gttttttata aagaaataag
    14341 gaagtgaagt taaatgccta atattactaa agctagaaca attacttatg atggtgaaga
    14401 agtatatgtg cgtacgcata ttgatgttgt cgatggttta gacaagtcga tgttattaac
    14461 cccagaatta atagaaaaaa ttaatgatat tgatggaagt gatattcctg attcattaac
    14521 aaatgcaact cctgaaaaag cgggtttaat gtctgcagaa gataagcgac gattagatga
    14581 gctaaaaacc aactcgaatc cttacaataa aacggtatct gattcaacaa caaccgcttc
    14641 taatacagta attgctgcag atattaataa gtggccgaac aatacacaag tagtgaattt
    14701 aagtaaacga gttagtgaat gtagaaatgg aatcgtgctt gtttggcgat ctgatgcaac
    14761 agatgatttt tatcattatc agtatgtacc taaaaatcat gttaaaacac atagtgctgc
    14821 aaaaattgtg catctaattc ccacaaattc agcaaatgaa ttttgtacta aaacggtgct
    14881 tattcgagat aatgttgtga ctggtaccga tgacaaccac aaccgtacaa caaaagcaaa
    14941 taaagtgcga ttgcatgaaa tattagagta ttaggaggca caccaatgaa tttaattaca
    15001 gatttaagta ataaggctgg agccgaatta cgcactcaat taatttataa ctttaaggag
    15061 atacaaaagg cattaaaagt tcaagattca aaagtgatag aaaacaaaat caatcaaaaa
    15121 gtatctaagt atgaatacga tatgaaaaga gagataagag caattgttct tcctgaaatg
    15181 tcacctcttc aaattactga cgattatgcg aaaagtttaa cagatttaaa aggagagcag
    15241 cacgaatcat taaaaggtag attagacgca gatttaaaat acattgcgaa aaaatcaatg
    15301 aaaacatcta ttgatgaccg atttatcgtt accgaaaacg gcacagtatt tgcagattat
    15361 ttgagcatgt ctaatactat taaaagtatt aaaaagattg gtgtgattgg cgattctgtt
    15421 gcaaaaggta gtcgtgcaac taaaaacttt ggcaagtatc tggcagaaat gttaggcgct
    15481 acggttcaaa atgaaggtgt cagcggtgca acaatgtcca cagttaaagc aaattccatt
    15541 tatgaacaag cggccaaaat tagaaataaa gatttagtta ttatccaggg aactgatgat
    15601 gactggcttt acaatggttc tgctggtgtt tctatcggta ccaataaaac aaatgtcaaa
    15661 actttttatg gtgcattttg taaaacggtt gagttaataa aaacaaataa tccacatgca
    15721 aaaattattg ttatgacagc aaccagacaa ctacctgtca atggtacaac gattcgtcgt
    15781 aaagatactg acaaaaatag tataggtctg actttagaag attatgtaaa tgcgcaagta
    15841 cttgcatgta cagaattaaa tgtacctgtt ttcgatgcat atcatacgaa tttgttagat
    15901 ccttacaatc ctgcatttag agtgaaaaat atggtggatg gtctacatcc aaatgaaaaa
    15961 ggccatgaag ttattacaca cgaattaata aaaaattatt tctattttta tggttaaagg
    16021 agcgttataa gatatggcaa atcaagattt attttatgac attacaaagc aaggtacgga
    16081 acaagaaaag cagcaacatt taataagtcg cgttggcgat ggtgggctta aaacagttac
    16141 tgttacagtt tggtctaatg gtacccctta taatatcacg ggtttgacac cagtttttga
    16201 aggcgttaaa ccggatggcc aaagaattat tgacacacga ggggctatcg tattagatcc
    16261 tgtcaatggt gtatttcgat acacattccc acatcaggca agtactgctg aaggcgaata
    16321 taaacaagcg tttttcaaat taaaacgtgg ggaacagact gattcgactc tagagattaa
    16381 aattaacgta ctaaaaaata tggttgaatt cggaattaat tcagaatcat actatactga
    16441 atatcaacaa aaagtatcag agttagaaga aaaaattagt gcttatttag aagaactaaa
    16501 aacgaaagca gcaggtacac aaactcaagt tgaagctaat gcaaacttag caaaagcgtt
    16561 aaagcaacag ttagatttga ttcaatctat cgccaacgag cgtgagttga tgacacgtgg
    16621 tgactttaac gaagctatta atactgtaaa taatactgtt gacaatatta gttctaattt
    16681 taatactttc aaaagagact caacagaaga gttaaagcgc ttcaaaagtg aagtaactgg
    16741 tgttaaaact ggcgtgcttg atgacgtggc caatatcaca aaatcgggtg tttactattt
    16801 tgatggtacg acaaggaatg taccgactcg taatacaaat aactctaatg gctatattca
    16861 agccgttatg aaagatgaaa ataatgggat gattacgatg cttggcgcag gttattctat
    16921 tgagaaatat cgaggtcagt tgcatggtcg ttgggtatct tcagttcctg taaaattatg
    16981 gagcggcaat cttattaaag gacagactgc tactttagca ggaaactgtc atgatttcgg
    17041 aaatctttta attgaagtag gttatactac aaatagtttt gctacagaat taattggcat
    17101 tccttcaaat ggcggtcgtg tttacttaaa taatattggg atgagaagtt caggagatgg
    17161 atttaagaat ggtcatcttg atgaagtcgt aatccaaatt aaagatgaca cacatatttt
    17221 attagaaaaa actttaagag ctactggtga tgagcaagca actaattctg atgcttatat
    17281 ttctgctatt tacggcattt actaatatgc tattaagtcg gcgtgattac gtcgactttt
    17341 tatattttct ttaaagtcaa gtgaggtgtc gttaaatgaa ttataaaaat aaagatatac
    17401 atgcaaacat caatgaatta ggtgtcgata ttggatatat cggtgctaat ttttattcaa
    17461 aagatgtagg tactgcatcg ataagaatta atattttttg gaatggtcaa ccttttgact
    17521 tatcaaatgc aaactatcag ccacaattaa atttattttg tgaagatggt tctgttttta
    17581 tggatgagcc acttgaaatc atttcccctt attccggctt aattcaatac aaggttactg
    17641 acaaagtgat tcgacattca ggtaaagtga aagctaagtt atttttattg aatgaaaata
    17701 cttctataca cgcattaaat tttatgttca atattgtcga tagtggtatc gaccaaacaa
    17761 tttctaaaga agttaatgtt gatttagtat ataccgctat taaagacgcg ttgaaatcta
    17821 aattatttga tatggatgaa ttaaaaaaag ttatgtctga cgtcgtatta gataacaaag
    17881 ataatttaaa acttgatgaa cctaaaaagt catcaatgtt tgaagggaaa acaggtgtct
    17941 ttgttggtga tagtatcact gaaaagaatt tcagaacaac aacgaactat catgaattta
    18001 ttgcttcaag aactggtttg aatgtcatta atatggggat tagtggcaca ggctatcaag
    18061 accgaaagaa tgttgcctta caaattaagg aacagccaga ctttatttgc gtttttttag
    18121 gtacaaatga ttatggtcta gtaggtgata agacaaatcc tttagggact gttgaggaac
    18181 gtgactatcg aactgttgca ggcagtattt attttactct attgcagcta acaaatcatt
    18241 ttcctaatac acctattgta gtgatgacgc cgcttccgag aatagaatgt tatccattaa
    18301 aagaagtggc taatgatgca ggttatacat taggtcaact agtagatgtc attaaaaata
    18361 tttcgaaatt gtttggttta cctgttttgg atctttatca tgaaagcaat ttaagagttt
    18421 gggaacctgc tgtaaataaa acattttttg cgtatgaaga aggtcaagaa gatggtttac
    18481 atccaaatga aaagggccat gaattcatat cgaatagcat tcaatcattt ttagaaaaat
    18541 atgcagtaag tccaaagttt gaaaacaaag tggatttgcc acctgatcaa gttttagaaa
    18601 acggaactgt cgttaagcat ctttatccta ctggcatttt ttggaaagaa aatcaaagtt
    18661 ttattataaa ttttgatgaa tcagaaataa gtttagataa caagaaaata ttaaaaatag
    18721 aaagtcaaaa ggcatctatt ctgaatgctt cgggcacact tcaaaattcg ccatactggt
    18781 atacgattcc aaataataca gatgaatata atcgtgttgc cgatgtaaca caatttactg
    18841 acagtttaac taaaactggt tatacgactg agcgcgggtt tgaatattta cctgaattgc
    18901 taaaagtcac atatgccgat gacgctaata atagtgttgt agcagaacca aattctaact
    18961 caacagaagc tgaagacact tctgaagtag cagcaagtaa tgatgaaatt tccaatgaca
    19021 atattgcgcc tacagaagaa gcagtaaatc ctattgataa tggtgacggc acatatattg
    19081 cttcagttgt gccaaatcga atttttagag atccaagcgg attgtttgga atcgctatta
    19141 accgtacagc attaaattta gaagataaaa gtgttgtaaa gattgagtta ggtaacgaag
    19201 ttttattaaa tccggaatat gtaccaaata caatttattg gagtggtgtc aatggtaggt
    19261 ctaccgatga agttgagcga tttattagtc atttagtaat tagaggagaa agaaatccag
    19321 gaagtgcaca agaatttaaa aatcaagcaa tcaaaattac gtatagaaac aactagaggt
    19381 gattcacatg atgattagtt ttacagaaac agaagttttt aagacatttt tttacgcagg
    19441 tgagatgaaa ctattatatt ttttaatgct cctgatggcg cttgatgtca ttacaggttt
    19501 ggccaaagct gtaaagaata aaaagttatg gagtcgaaag tccatgtttg gttatgcacg
    19561 taaaatgttg attttctgta ttgtcatttt ggccaacatt atcgaccaaa ttttaaacgc
    19621 aaatggtggc attgtgatga tgacgttatt tttctatatc actaatgagg ggttatcgat
    19681 tgtagaaaat tgtgcggaaa tgggcgtgtt gattccgaag cagattgcgg aaaaattggc
    19741 agtgattggg aatgatgatc ataagtcaat tatccatgag ttaaaagaag aaatgtcaga
    19801 tacaactaaa aaacgataag gggatgatta tatggctaag gaaaaaatcg ggacatggaa
    19861 tggtgtgcca gtatatacag atttcctgcc aatcggaaca cgtcgtagtg gtcaaaggct
    19921 agtgagtggc aatcctaagt ttgcggtatt tcatgacacc ggaaataggg atagtactgc
    19981 acaaaataat gtcgattatt atcgcaatac gtataacatc gattgggctt acactgcatc
    20041 agctcatgtg tttgtggatg ataaagagtg tatcatctgt atcccagtga ctgagaaagc
    20101 atggcacgta ttgtatgata cgcctattga taacgactgg tacggcgatg atgcaaatga
    20161 cattgcattt ggattagagg cttgttattt ttctgatgaa ggtagaacgc ttaagtcatt
    20221 agacaatgcg tgtcgtatta tgggggcgtt gtgtaattcg tgggatatta acccgcgcaa
    20281 tgaaatgcct ggtcaccaag atattcagtt cgataagcaa gatccaggaa acattttgga
    20341 agcggcgggt tatggcaggc acgacatgca tatcattgat gacttggtcg tgaaatatat
    20401 gaaaggtgat tccccagcac cgaaagtggc caaaacggta agcaagccga aacaaggtaa
    20461 accgcctaaa acggtgtggg catggcatgg catttttacc gcttcagatg acaacgatga
    20521 tgcaattgtc gtacgtcgcg catttggaat ggatgccgaa gaagtggata gcgggtcatg
    20581 gatttaccca ggcgaatatg tagaattcga ccaagttatt aaagatgtta aaaataaaat
    20641 gtggtggatt cgtttcaagt atcaagcgga tggagctaac aagaaagaca atttttacat
    20701 gccaattggt gaaattactg ataaagatgg aaaattgctg a
//
LOCUS       DANHPA010000041        20691 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.041, whole genome shotgun sequence.
ACCESSION   DANHPA010000041 DANHPA010000000
VERSION     DANHPA010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 20691)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20691)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20691
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.041"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..255)
                     /locus_tag="PTC28_001182"
     CDS             complement(<1..255)
                     /locus_tag="PTC28_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HDK5716476.1"
                     /translation="MKQSTLKTKWTFVTTLITFLIIFIFCLLIIYAISSLLKQNEFDK
                     AERSADDLYNLLETKPMKNITALEFSSVLDNYQKVILYNKS"
     gene            complement(252..929)
                     /locus_tag="PTC28_001183"
     CDS             complement(252..929)
                     /locus_tag="PTC28_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDK5716477.1"
                     /translation="MKKVLIIEDEQNLARFIELEFKHENYEVEVKYDGVSGLNRALQH
                     DFDLILLDLMLPEMDGLEVCKRLRTQKDTPIIMITAKGEIYDKVTGLDIGADDYIVKP
                     FEIEELLARSRALIRRYSDENVSDTNVVEIDGIKIDKSAFHVTYQSEKLELTKTEFDL
                     LLLLAENKNRVLHREQILDHVWGYESEVETNVVDVYIRYLRNKLKRIDKQKLIETVRG
                     VGYVIRQ"
     gene            complement(1426..2049)
                     /locus_tag="PTC28_001184"
     CDS             complement(1426..2049)
                     /locus_tag="PTC28_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HDK5716478.1"
                     /translation="MTYWKKISLLIVFTLIFSMIAMFHESRLGKWIDNEVYNLIYASE
                     SFISTAIFFGATQIGEVWAMIALSLVMVALLMLYRYKIEALFFALTMLLSGVSNPILK
                     NIFDRERPTLLRLIDISGFSFPSGHAMGSTAFFGSVIYVAHRILKGKAKSVAMTLSVL
                     MIVLISSSRVYLGVHYPTDIMAGIVGGLFCIVLTQLILRHPLAQTKI"
     gene            complement(2046..3131)
                     /locus_tag="PTC28_001185"
     CDS             complement(2046..3131)
                     /locus_tag="PTC28_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HDK5716479.1"
                     /translation="MVKIAFTGGGTVGHVSVNLSLIPTALEKGHEAFYIGSKQGIERE
                     MITSQLPETTYYPISSGKLRRYLSVENLKDVFKVVKGIGDARKVLKRERPDIVFSKGG
                     FVSVPVILAAKSLNIPTIVHESDLTPGLANKIAIKFAKRLYTTFEDTLKYVPHEKSDF
                     VGATIREDLKHGHQQNGYALTGFTPNKKILLVMGGSMGSLKINEAIRRHLDELLQTYQ
                     IIHLTGKGLVASNINKDGYVQYEFVKEELTDLLAITDTVVSRAGANAIYEFLTLRLPM
                     LLIPLGLDQSRGDQIDNAKYFEKQGYATMLDESELSSDTLLLALTELEKNRHQYIQNM
                     ESFTESYTRHDLLEKIIQDALQLEVGA"
     gene            complement(3141..3656)
                     /locus_tag="PTC28_001186"
     CDS             complement(3141..3656)
                     /locus_tag="PTC28_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDK5716480.1"
                     /translation="MGLLRKATLQDLDTIEQLTEEAKALMIKDDNPQWDHRYPLKTHF
                     NTDIESGSLFVYDEDDVIQGFIVIDQQAPDWYDTLEWPVDKSQAYVIHRLVASPQYRG
                     TAQALMTFAIALAKEHNIDILLTDTFSQNQRAQRLFDKYGFIKIGEMTSTEFPFDKGK
                     PFYAYYKKLTE"
     gene            complement(3656..5185)
                     /locus_tag="PTC28_001187"
     CDS             complement(3656..5185)
                     /locus_tag="PTC28_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HDK5716481.1"
                     /translation="MSHPFSLCHTIKSARVYADHYNANMDLTRRAENRLKDSPNQRKT
                     PRYVSLKTFMLSIILTVLLTGIIIFGFNYFFQQYSKDEKISENAQKLSEVYEILASDF
                     YQKQDKEQLLDEAIHGMTKSLKDPYTEYLSKEKTASFHEDVSGDFVGIGAELQQKGKQ
                     IIITSPMQDSPAEKAGLKPRDELIAIDGKSIKGKTLDAIIPKIRGKKGTEVKLTVKRN
                     GEEKELTVTRDTIHVKSVKYEKHGNVGVFKINKFQEGTAGELKSAIQQAQKSGIKNIV
                     LDLRNNPGGLLDEAVKMANIFLDQDETVVQLEKGDQKESIKTPNAPLEGVKDLKVSIL
                     LNEGSASASEVFAGALHDHKVAKIYGEKSFGKGIVQTTREFEDGSLLKFTEMKWLTPN
                     GHYIHGKGIQPDIPVKGADYENISVIPTKTTYHQGQEDKHVKSIKIGLKALGYDVGTI
                     DEHYNAQLTTAVKQFQQKNDLTANGMFNKETNGVFTERLVEKASSEDLMLEQTLKKVE
                     E"
     gene            complement(5236..5457)
                     /locus_tag="PTC28_001188"
     CDS             complement(5236..5457)
                     /locus_tag="PTC28_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YozE family protein"
                     /protein_id="HDK5716482.1"
                     /translation="MKDVSFYQFALTVRGRKDDAGQLAEQIFQDLSFPKYDKNFDALS
                     EYIETEGNFTLPMSVFDDLYEEYQEWLQF"
     gene            complement(5457..5957)
                     /locus_tag="PTC28_001189"
     CDS             complement(5457..5957)
                     /locus_tag="PTC28_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HDK5716483.1"
                     /translation="MFKKLFGKSEEANKEIQVYAPMTGEYVKIEDIPDPVFAQKMMGD
                     GFGIRPTEGKVVSPITGVVDNVFPTKHAIGLKADNGLEVLVHIGLDTVQLNGEGFETL
                     VNSGDTVKVGDPLVTFDVDYIDQHAKSIVSPVIITNTDQTVAIDIQQVAQLNKGETSV
                     IEVTMK"
     gene            complement(5971..6399)
                     /gene="msrB"
                     /locus_tag="PTC28_001190"
     CDS             complement(5971..6399)
                     /gene="msrB"
                     /locus_tag="PTC28_001190"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HDK5716484.1"
                     /translation="MIKKDKKDLTDLEYLVTQQDGTEPPFQNEYWNHFEKGVYVDKLS
                     GKPLFTSNDKFESDCGWPSFSKAIDDQEIIELVDKSFGMLRTEVRSEGSNSHLGHVFN
                     DGPKDRGGLRYCINSAAIQFIPYEKLESLGYGDLVKLFDK"
     gene            complement(6396..6920)
                     /gene="msrA"
                     /locus_tag="PTC28_001191"
     CDS             complement(6396..6920)
                     /gene="msrA"
                     /locus_tag="PTC28_001191"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDK5716485.1"
                     /translation="MALATLAGGCFWCLVKPFDTFDGVERVTSGYSGGTVENPTYEQV
                     CTNTTGHVEAVQIEYDDNVISYDDILDIYFKTFDPTDKNGQFFDRGDSYRPVIFYHNE
                     AQQQAALNKIDALNQSRIFSDPVVTPVEAYRNFYPAEEAHQDYYKKHPLHYAQYQRGS
                     GRKAFIEKHWGDQA"
     gene            complement(6938..7792)
                     /locus_tag="PTC28_001192"
     CDS             complement(6938..7792)
                     /locus_tag="PTC28_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HDK5716486.1"
                     /translation="MQQRIIVTDSTSDLDHAFLKQHNVHIVPLSVTINGESYEDQKDI
                     SSESFSQYLGDSSYDFKTSQPPIGRFVETYEKLGQNGAEIISIHLSSGLSGTYQTAVQ
                     ASEMVDAKVTVIDSKSISFGLGYQLQNAIRWVEEGIPTEEIISKLQNLQKNIKLYVII
                     GQLDQLIKGGRISKTKGLIGNLMKIKPIGSVIDGKLEMIHNARTQNASIKYVLKDLKP
                     FVGDASIKSIGISHAKAKDFMDKFKEKLDETFTVQNFDFGHTTPVISTHTGAGAIGLV
                     VLKDSSDS"
     gene            complement(7811..8290)
                     /locus_tag="PTC28_001193"
     CDS             complement(7811..8290)
                     /locus_tag="PTC28_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HDK5716487.1"
                     /translation="MTLSILVAHDQQRGIGFEGQLPWYLPNDLKHVKKLTTGHTLVMG
                     RATYESIGKPLPYRRNVVITSNPDFKPDGVEVIHSIEEIDAIGDDHIFIFGGQTLFET
                     FIDRVDDMYITVIDDKFQADTFFPPYTFEDWEVTSAVEGTVDEKNKYPHTFLHLTRK"
     gene            complement(8309..9262)
                     /locus_tag="PTC28_001194"
     CDS             complement(8309..9262)
                     /locus_tag="PTC28_001194"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HDK5716488.1"
                     /translation="MNPFDAAYHDLCKEILEIGNQRDDRTATGTISKFGHQLRFDLSK
                     GFPLLTTKKVSFKLVATELIWFIRGDTNLRYLLQYNNNIWNEWAFEKYVQSEDYTGPD
                     MTDFGHRAQSDAAFAETYREEMTKFKQQILTDDDFMKKHGDLGNVYGKQWRNWVSANG
                     QQYDQLKALIEQIKTNPNSRRHIISAWNPTEIETMALPPCHTLFQFYVQDNKLSCQLY
                     QRSADIFLGVPFNIASYSLLTHLIAKECGLEVGEFVHTFGDAHIYSNHLDAVKTQLAR
                     SSFAPPELKINTDRSIFDIEYEDLEIVNYESHPAIKAPIAV"
     gene            complement(10068..10508)
                     /locus_tag="PTC28_001195"
     CDS             complement(10068..10508)
                     /locus_tag="PTC28_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrxA/BrxB family bacilliredoxin"
                     /protein_id="HDK5716489.1"
                     /translation="MNAYDAYMKELAAQMRGELTQNGFESLESEDSVSQYMNNVKDED
                     TTFVVINSTCGCAAGLARPAAVAVAEQNEYKPTNKVTVFAGQDKEATAKMREYIQQVP
                     SSPSFALFKGSELVHFIPREHIEGRDINDIAMDIKDAFDTHCRA"
     gene            complement(10533..11651)
                     /locus_tag="PTC28_001196"
     CDS             complement(10533..11651)
                     /locus_tag="PTC28_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011303095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conserved virulence factor C family protein"
                     /protein_id="HDK5716490.1"
                     /translation="MEIIKVEPTPSPNTMKIILSEKRQDNHSKTYTEVTDSQPHFINA
                     ILQVKGVKSVFHVLDFIAVDKAPKADWETVLPLVTATLNQDQQQSDTTQPEPDTHFGE
                     VKAEVLKFKNIPYQVKLTTPKEENRQQLSDIFVNAMLEAQQPHDNVVFLRKWETLGVR
                     YGDLDDVMQSVVEEINALYPEHVLNLLVQEAKNTDVTVPQKQYEHVTLETYQQEIDWK
                     ARLRMLKSFPTPTSDDYPLLDYALNEDKVPLRREAVVLLSMIEDRETLPYLYKGLHDK
                     SPAVRRTAGDSLSDLGFKEALPEMEKALDDPQKIVRWRAAMFLFDEGGPEQLVTLKAH
                     QNDPAYEVKLQIEMAITRIENGEAALGSVWKQIANRNQ"
     gene            complement(11683..11868)
                     /locus_tag="PTC28_001197"
     CDS             complement(11683..11868)
                     /locus_tag="PTC28_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HDK5716491.1"
                     /translation="MLTDSEKKAIASIDHLSQQYCEHCLVKAHLRKTKGKTQAHHFCI
                     NACSIGKQIQQLGNALQ"
     gene            12094..12792
                     /locus_tag="PTC28_001198"
     CDS             12094..12792
                     /locus_tag="PTC28_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="queuosine precursor transporter"
                     /protein_id="HDK5716492.1"
                     /translation="MYNEWLGLGSFIVTFVLMVVMFRLFGKSGLYAWVAIGTIIANIQ
                     VLKTVDIFTISATLGNVMFASIYLATDILNDIYGRKVAKKAVWLGFSSTFIMIIVMQV
                     SLAFQPSEVDMAQDAMKAIFDVVPRIAFASITAYIIGQHIDVLVFNMIKKVFRSDRTF
                     FIRAYGSTTLSSIVDTALFVMIAFYGSLPNGVVLEIFITTYLLKLLTTVLNVPFGYWA
                     KSLYRRNKIKDDTL"
     gene            12848..13246
                     /locus_tag="PTC28_001199"
     CDS             12848..13246
                     /locus_tag="PTC28_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI family protein"
                     /protein_id="HDK5716493.1"
                     /translation="MAKIYFDAATKGNPGLSACGVVIVTENERYTFTKVLDALDNHSA
                     EWEALLFALEQAQTLAVLNALVFTDSQLIEDAVNREFVKNGRFKPYLERYLQMTHDFE
                     LAFVKWIPRAQNKAANQLAQDALYQALGRS"
     gene            complement(13376..14257)
                     /locus_tag="PTC28_001200"
     CDS             complement(13376..14257)
                     /locus_tag="PTC28_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease"
                     /protein_id="HDK5716494.1"
                     /translation="MTHKLLLIDGMALLFRHFYATSVHKNFMRNTNGTPTNGTQGFVR
                     HVYSAIRDVEPTHVAICWDMGKATFRNDMFDGYKQNRPAPPEELIPQFDHVQHISESL
                     GFLNIGVENYEADDVIGTLTHAYAQSPDHEVYIITGDRDLLQCVRDNVYVWLIKKGFT
                     EYSKYDRARFELEYQLQPPQLIEVKAFMGDTADGYPGVKGIGEKTAIKLVQQYGSVEE
                     VIANVSQLTPGQQKKIAQNMENLRLSKQLATIELNVPLSIDTLFEQMAHQVELNHVLA
                     VLDEHELFVSKRFVQNL"
     gene            complement(14262..17717)
                     /locus_tag="PTC28_001201"
     CDS             complement(14262..17717)
                     /locus_tag="PTC28_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HDK5716495.1"
                     /translation="MQNQEQLDILYKLKKEVEKSDHSAFIHTINQMIKKVYLNHYTMT
                     FVGHFSAGKSTVINRLIGQDILPSSPVPTTSNTALVTIAEAPGITANIEGQKYTQLNS
                     YDDVKQMNRENFHVESIDIRIQSDAFHKGFTFQDTPGVDSNVQSHNMQTEQFLYTSNI
                     VFYTVDYNHVQSALNFQFMKRLNRAGIPVVFVINQIDKHDENELTFQTFQNRVEQSVS
                     EWDIDLLETFYITKFDHPQNQFDALRAFIMEQDQHREAVKDYVARMKQFIHQHQLNYL
                     QHEMDEILERLNIEATQFDQAYQSHQQNEMISEEAQLLNDAVALKHYLKDKRRSIIDN
                     AYIMTHDMRETIRYCLESMTKDFKAAGLFNKKKKTEEERQTRLNELMIALQSKVDHQI
                     IKPMQEDLSFLTRFINDTDLNQRILNQKLTLPTSIITDLYQTQIQITNQYVLTFSNDV
                     MKAIKHYILKELEPLDDTIIDNVHAEEHLVDESNDSSAYTRYIELRNLSQSLKTENYR
                     HYYIHMEDSLDRLIDRTEIQYQVKSNEDNKKDVQQQEDVVTAEKNPINDAQMTQALDI
                     VKNIPLFKSSVKNIEETQERMQHQTVKIGVFGTFSAGKSSLINALLGDNYLTSSPNPT
                     TAATTEIGYGDTYHVTFKTPDMLLQQINDVFELEGQQFDSIEAFLEANIEKLKGRIDK
                     SRLAFIHAIEKNYALYQSYIAEGLKHEIQATDVQKWSAEDEYATFVQTVHLRLPLDWL
                     KDKVIVDSLGLHSNNQRHTNETEKILTTSDLILYVSYFNHAFTDNDKAFIEHMKNINQ
                     LKEQQAFKMVINATDLAENEVDKRAVRDYVADALMQVQMQPEIFSVSSRAALTKGDAG
                     VQQLKASISRFSEVESKHILEAKMYDQLRSIGQSYTQMIEDHTANAEKMQHVKQQLQK
                     MRQTTIFNSESLTAIRQKLINEIEDQMYHLNERLKIQLLDNVKAIYNTQMTNTTSFNE
                     EKRQSTKAYLNQIHQKLYLEQTLMIERIKFFFNLAFQQEMATKIRSFQQYHILLPDIE
                     TIEVAPVDQSFLTISFDDMVNALPKQLTKKNIMQPQVQKQIQADIKDETVTLLQPRLA
                     DLRQALESMLDTLTTQAQQALEQIESQAQREIDTVLAVEVDDALIAQLQVETPKLLTI
                     LNSKD"
     gene            complement(17881..18798)
                     /gene="rarD"
                     /locus_tag="PTC28_001202"
     CDS             complement(17881..18798)
                     /gene="rarD"
                     /locus_tag="PTC28_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDK5716496.1"
                     /translation="MYQDKEFKKGILFALLAYVIWGTLPLYWALIHDVDPIETLMYRI
                     VLSLIFMLLLLPIIGQWQRFAQDMAQLKAKPFKLLIIILAGYIVTVNWGTFIYAIDAG
                     FVLQTSLGYYINPLVSILLSMIFFKERFNRLEWVAILFAVLGVVYMTFKVGEFPYISL
                     ILAFSFGIYGLLKKLVPMPALSSITIESLATAPMAIIYLIIVGQTADLSIGWNMSTFW
                     LLFSGAVTALPLLSFSEGAIRIPLSLMGFIQYVGPTLIFILGIFVFKEPFNVDQFITF
                     CFIWVGIVIYVISQILKIKKRPQSFQYQN"
     gene            complement(18832..19959)
                     /locus_tag="PTC28_001203"
     CDS             complement(18832..19959)
                     /locus_tag="PTC28_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002446454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HDK5716497.1"
                     /translation="MYQLLAVCPMGLESIVAKEVQDLGYDTHVENGRIYFEGDASAIV
                     KANLWLRTADRVKLIVGQFEAVTFDSLFEQTKNLPWEQFIPTDGQFPVQGRSLKSKLF
                     SVPDVQAITKKAIVERLKNAHQVSGWLDESGAKYPVEVAILKDKVLLTIDTSGSGLNK
                     RGYRLAQGEAPIKETLAASLVKLANWTGDTPLIDPFCGSGTIAIEACLIAQNIAPGFN
                     RSFISEQWDIIPKGLYDQKRAEADELADYDKEIEIYASDIDPEMVEIAQRNADEVGVG
                     DIIRFEVKDVNTLTINHDGPIGLIGNPPYGERIGDRAEVEEMYRNLGILMQNHPNLSL
                     YIMTSNKEFEYLANRKATKRRKLFNGYIETTYYQYWANKKS"
     gene            complement(20240..20626)
                     /gene="rnpB"
                     /locus_tag="PTC28_001204"
     ncRNA           complement(20240..20626)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="PTC28_001204"
                     /product="RNase P RNA component class B"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00011"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00011"
BASE COUNT         5981 a         3964 c         3673 g         7073 t
ORIGIN      
        1 gctcttattg tataaaatta ctttttgata gttatcaagt acggagctga attctaatgc
       61 agtaatattc ttcatcggtt tcgtttcaag taaattgtat agatcatcag cgcttctttc
      121 tgctttatca aattcatttt gctttaataa gctgctgatg gcataaatga tgagcaaaca
      181 aaagatgaaa ataataagaa atgtaatgag tgtcgttaca aaagtccact ttgtcttgag
      241 cgttgattgt ttcattgacg aatcacatag ccgacaccac gcacagtttc aattaatttt
      301 tgtttatcaa tgcgctttaa cttatttcgt aaataacgga tatacacatc aaccacattc
      361 gtttcgactt cagattcata tccccagacg tgatctaaaa tttgttcacg gtgaaggacg
      421 cgatttttat tttcagcgag gagtaataat aaatcaaatt ccgttttcgt taattccagt
      481 ttttcgcttt gataagtgac atgaaaagca ctcttatcaa ttttaatacc atcaatttcc
      541 acaacatttg tatcggacac gttttcgtct gaataacgac gaatgagtgc gcgacttcta
      601 gctaatagtt cttcaatttc aaatggttta acgatgtaat catctgcacc gatatctaat
      661 ccagtgactt tatcgtatat ttcacctttc gcagtaatca taataatcgg tgtatctttt
      721 tgtgttctta atcttttaca gacttctaag ccgtccattt ctggtaacat caaatctaag
      781 agtattaaat caaagtcatg ctgtaatgcg cggttcaaac cagatacacc gtcatatttc
      841 acttctactt cataattttc atgcttaaat tcaagttcaa tgaaacgtgc taaattttgc
      901 tcgtcttcaa taataagtac ttttttcata ttagccacct ctccccctaa tcatatgcta
      961 aaaatgagga acgcgaaagt tttttaaaaa aatttgcgtt tttaattgac aatgattctc
     1021 aatgcgttat aatgtaattg aaaatgatta tcaatcccaa cgacccccca ctacaattcg
     1081 ttcttatgat tgagtcattt tcaataatat ccccttttat atgcccgtat aaaaattcgt
     1141 tgatattaaa cgttaaataa aagccgtcgc agtaaatgcg gcggctttta ttgtgcatgt
     1201 ttttgagtga gaaagaagag aaaaagcttg atgtcacgtc ctctcttttg tacacatggg
     1261 tatctgtgtt ttaaaaaaga taatgcttga agacagtcat atttttcaca gtaatctcat
     1321 gctattgctt gaaaagatgg aacttagtga aagaaattag atgctatgat aaccatcgca
     1381 tataaaaaga actgtctctc ctcatgaaag acagttcttt attgattaga ttttagtttg
     1441 ggctaatggg tggcgtagga tgagttgtgt cagcacgata cagaagagcc ctccgacaat
     1501 accagccatg atatctgttg ggtaatgtac gccaagatag acgcgtgagc tcgaaatgag
     1561 aacgatcatt aacacactta atgtcatcgc cacgcttttt gcttttcctt ttaaaatacg
     1621 gtgtgcgacg taaatcacac taccgaaaaa ggcagttgat cccattgcat gaccacttgg
     1681 aaagctgaac cctgaaatat caattaagcg taataaagtt ggacgttctc tgtcaaaaat
     1741 atttttcaaa atagggttcg atacccctga taacagcatc gttaatgcga aaaagagcgc
     1801 ctcaatttta tagcgataga gcatcaacaa tgcaaccatg acgagtgata atgcaatcat
     1861 agcccatacc tcaccaattt gcgtggcacc gaaaaagatt gctgttgaaa taaagctttc
     1921 tgacgcataa atcaaattat atacttcatt atcaatccat ttaccgagac gtgattcatg
     1981 aaacatcgca atcattgaaa atattaatgt gaagactatt aacaaagaaa tctttttcca
     2041 atatgtcatg cgccaacctc caattgaagt gcgtcttgaa tgattttttc gagtaaatca
     2101 tgacgcgtat agctttctgt aaaactttcc atattttgaa tgtactgatg tcgatttttt
     2161 tcaagttcgg ttaatgcaag taataacgtg tcactcgata attccgattc atctaacatc
     2221 gtcgcgtatc cttgtttttc aaagtatttc gcgttatcga tttggtcacc acgtgattga
     2281 tcgagaccaa gtgggataag taacatagga agacgtaatg ttaaaaactc atatatcgca
     2341 tttgcacccg ctcttgacac gacggtatct gtaatcgcta ataagtcggt taattcttct
     2401 ttaacgaact catattgcac gtagccatct ttattaatat ttgaagcgac aagacctttc
     2461 ccagtcagat gaataatttg atacgtttgc agtaattcat ctaaatgacg acgaatggct
     2521 tcattaattt tcaaacttcc catactgcca cccatcacga gtaatatctt tttattaggt
     2581 gtgaagcctg tcaatgcata gccattttgt tgatgaccgt gttttaaatc ttcacgaatc
     2641 gttgccccta cgaaatctga tttttcgtgt ggcacgtatt ttagcgtatc ttcaaaagtg
     2701 gtatagagtc gtttcgcaaa cttaattgca atcttgttag caagccctgg tgttaaatct
     2761 gattcatgta caatggttgg aatgttcagt gacttcgctg cgagtatgac aggaacagat
     2821 acgaagccgc cttttgaaaa tacgatatca ggtcgttcgc gctttagcac tttacgtgca
     2881 tctccaatgc ctttaacgac tttaaagaca tctttcaaat tttcaacaga taagtaacga
     2941 cgtaatttcc cactagaaat cggataataa gttgtttcag ggagttgaga tgtaatcatt
     3001 tctcgctcga tgccttgttt tgaaccaata taaaaagctt catgcccctt ttcgagtgca
     3061 gtcggtatca aacttaaatt cacggacaca tgcccaactg taccgccgcc tgtaaatgca
     3121 atttttacca taataaccct ctattctgtt aattttttat agtatgcgta aaatggcttg
     3181 cctttatcaa aaggaaattc tgtgctggtc atttcaccga ttttaatgaa tccatattta
     3241 tcaaataaac gttgtgcacg ttgattttgt gaaaaagtat ccgttaataa aatatcaatg
     3301 ttgtgctctt tcgctaatgc aatcgcaaaa gtcatcaacg cttgagctgt tccacgatat
     3361 tgtggcgagg ctacaaggcg atgaatcacg tatgcttgtg atttgtcaac tggccattcg
     3421 agtgtatcgt accaatctgg tgcttgttga tcaatcacga taaaaccttg aatcacgtca
     3481 tcttcatcat agacaaagag gctacctgat tcaatatccg tattaaaatg tgtctttaaa
     3541 ggatagcgat ggtcccattg tgggttgtca tctttaatca tgagtgcttt tgcttcttca
     3601 gtcaattgtt caatcgtatc gagatcttgc aatgttgctt ttcttaacaa gcccatcact
     3661 cctctacttt tttcaatgtt tgttctagca tcagatcttc agacgatgct ttctcgacaa
     3721 gtctttctgt aaatacacca tttgtttctt tgttaaacat cccatttgcc gttaaatcat
     3781 ttttttgttg aaattgtttt actgcggtag tcaattgggc gttataatgt tcatcaatag
     3841 tacccacatc ataaccaagt gctttaagac cgatttttat tgatttaaca tgtttgtctt
     3901 cttgtccttg gtgatatgtt gttttggtag gaatcacaga aatattctca taatccgcac
     3961 ctttaacagg gatatcaggt tgaatccctt taccatgaat gtaatggcca ttaggtgtga
     4021 gccacttcat ttcagtaaat tttaataacg aaccgtcttc aaactcacgt gtcgtctgta
     4081 caatcccttt accgaacgat ttttcaccat aaattttggc tactttatga tcatgtaatg
     4141 caccagcaaa gacttcggaa gcacttgctg aaccttcatt gagtaaaatc gatactttta
     4201 aatctttcac accttctaac ggcgcatttg gtgttttgat agattctttt tgatcgcctt
     4261 tttctaattg aacgaccgtt tcatcttgat caaggaaaat attcgccatt tttacagctt
     4321 catcaaggag accacctgga ttgttacgta aatcaaggac gatattttta atacctgatt
     4381 tttgcgcttg ctgtatggca gattttaact ctcccgccgt cccttcttgg aatttattaa
     4441 ttttaaacac acctacattg ccatgttttt catattttac acttttaaca tggatagtat
     4501 ctcttgtcac agtgagttcc ttttcttccc cgttacgttt aactgtcaat ttcacttcag
     4561 ttcctttttt accacggatt ttaggaataa ttgcatcaag cgtttttcct ttgattgact
     4621 tgccatcgat tgcaatcagt tcatcacgtg gtttcaaacc agctttttca gcaggtgaat
     4681 cttgcattgg actcgtaatg atgatttgct ttcctttttg ttgcaattcc gcaccaatac
     4741 cgacgaaatc accagaaaca tcttcatgaa aagaagctgt tttttctttt gataaatatt
     4801 cggtataagg gtctttcaaa cttttggtca tcccatgaat ggcttcgtct agcaactgtt
     4861 ctttatcttg cttttgataa aaatctgacg ccaatatttc ataaacttca cttaacttct
     4921 gagcattctc actaattttc tcatctttac tgtattgttg gaaaaagtaa ttgaaaccaa
     4981 aaataatgat tcctgtcaat aatactgtga ggataatact taacataaat gtttttaatg
     5041 agacatatct aggtgtcttt ctttgatttg gtgaatcttt caatctgttt tccgcccttc
     5101 tcgttaaatc catgtttgca ttataatgat ccgcatagac gcgtgcagat ttaatggtgt
     5161 gacataaaga aaaagggtga gacatcttct gccatcaccc tcaaaattta tgcgtgtcaa
     5221 aacttcagca atcacttaaa attgaagcca ttcttgatat tcttcataca agtcatcaaa
     5281 aacagacatc ggtaatgtga aattgccttc tgtctcaatg tattcagata acgcatcgaa
     5341 atttttatcg tattttggaa aggataaatc ttggaaaatt tgttctgcga gttgtccagc
     5401 atcatcctta cgaccacgaa cagttaatgc aaattgataa aatgagacat ctttcattat
     5461 ttcattgtca cttcaatcac tgatgtctcg cctttgttca attgcgctac ttgttgaata
     5521 tcaatggcta ctgtttgatc tgtatttgta atgatcacag gtgatacgat agattttgcg
     5581 tgttggtcaa tataatcaac gtcaaatgta acgagtgggt cgcctacttt taccgtatct
     5641 ccgctattga ctaatgtttc aaaaccttca ccatttaatt gaacagtgtc taaaccgata
     5701 tgaacaagga cttctaaacc attgtctgct tttaaaccaa tcgcatgttt ggttgggaaa
     5761 acgttgtcga ctacaccagt aattggagac acgacttttc cttcagttgg acgtatgcca
     5821 aaaccgtcac ccatcatttt ttgagcaaaa acagggtctg gaatgtcttc aattttgaca
     5881 tattctccag tcatcggtgc atagacttga atttccttat ttgcttcttc actttttccg
     5941 aataatttct taaacataaa actcgctcct ttatttgtcg aaaagtttga ctaaatcacc
     6001 atagcccaac gattcgagct tttcatacgg tatgaattgg attgcagcag aattgatgca
     6061 atagcgcaag ccaccacggt cttttggacc gtcgttgaac acatgtccta aatgactgtt
     6121 gctaccttca gagcggactt ccgttcttaa catgccaaac gatttgtcta ccagttcaat
     6181 aatttcttgg tcgtcgatgg cttttgaaaa actaggccag ccacagtcag attcaaattt
     6241 atcatttgat gtgaataacg gtttgccaga aagtttatcc acatagactc ccttttcaaa
     6301 gtggttccaa tattcatttt gaaatggtgg ttctgtgcca tcttgttgtg tgacgaggta
     6361 ctccaagtct gttaaatctt ttttatcttt tttaatcatg cttgatcccc ccaatgtttt
     6421 tcaataaacg ctttacgtcc tgatccacgt tgatattgtg cgtagtgaag cggatgtttt
     6481 ttataataat cttgatgtgc ttcttctgct ggataaaaat tgcgatatgc ttcaacaggc
     6541 gtcacaacag gatcactaaa aattcgggat tgatttaacg catcaatttt attcaaagcg
     6601 gcttgttgtt gcgcttcatt gtgataaaaa atgacaggtc gataactgtc gcctctatca
     6661 aaaaattgac cgtttttatc tgtcggatca aacgttttga aatatatatc taaaatatca
     6721 tcataactga tcacattgtc atcgtattca atttgtacag cctctacatg gcctgttgta
     6781 tttgtacaaa cctgttcata ggttggattt tctactgtcc caccgctata acctgatgtg
     6841 acacgttcaa caccgtcaaa tgtatcaaaa ggtttaacga gacaccaaaa acatcctcct
     6901 gctaaagttg ctaaagccat gcttgacacc tccatcatta tgaatcagat gaatctttaa
     6961 ggacaactaa accaatcgca cccgcaccgg tatgtgttga aatgacaggt gttgtatgtc
     7021 cgaaatcaaa gttttgaact gtaaaagttt catctaattt ttctttaaat ttatccatga
     7081 aatcttttgc ttttgcatgt gaaataccaa tcgatttaat ggatgcatca ccgacaaacg
     7141 gttttaaatc tttgagtacg tatttaatac tagcgttttg tgtacgcgca ttatgaatca
     7201 tttctagctt gccatcaatc actgaaccaa ttggcttgat tttcataaga ttaccgatta
     7261 aaccttttgt tttgctaata cgtccacctt tgatgagttg atctaattga ccgataatca
     7321 cgtaaagctt aatgtttttt tgcaagtttt gaagttttga gataatttcc tctgttggaa
     7381 tgccttcctc aacccagcga atcgcatttt gaagttgata gcctaagccg aaagaaattg
     7441 atttagaatc aatgactgtc actttagcgt caaccatttc actcgcttga acagcggttt
     7501 gatacgtgcc acttaacccc gatgaaagat gaatactaat aatttcagca ccgttttgac
     7561 ctagtttttc ataggtttct acaaatcttc caattggagg ttggctcgtt ttaaaatcat
     7621 agctactgtc tcctaaatat tgtgaaaaag actcagatga aatgtccttt tgatcctcat
     7681 aagattctcc gttaattgta acactcaacg gaacaatatg gacattgtgt tgcttcagaa
     7741 aagcgtgatc taagtcagat gtagaatctg taacaataat acgttgttgc ataatgctaa
     7801 cctccaataa ttactttcga gtgagatgta aaaaagtgtg cggatattta ttcttttcat
     7861 ccacggtgcc ttctacagca gatgtcactt cccaatcttc aaatgtgtat ggtgggaaaa
     7921 atgtatctgc ttggaatttg tcgtcgataa cagtgatata catatcgtca acacggtcaa
     7981 taaaagtttc gaataacgtt tgaccgccaa aaataaagat gtggtcatcg ccaatcgcat
     8041 caatttcttc aatgctatga atgacctcca cgccgtctgg tttgaaatca ggattactcg
     8101 taataacaac atttctacga taaggtaacg gtttaccaat ggattcgtat gtcgcgcgtc
     8161 ccattacaag tgtatgtcca gttgtcagtt ttttaacatg ctttaagtca ttgggtaagt
     8221 accatggtaa ctgtccttca aagccaatgc cacgttgttg gtcatgtgcg actaaaatag
     8281 ataatgtcat atgattactc ctttttgttt ataccgcgat aggtgcttta atcgctggat
     8341 gagattcata atttacaatc tctaaatctt catattcaat gtcgaaaata gaacgatctg
     8401 tattgatttt taattctggc ggcgcaaaac ttgaacgtgc taattgcgtt ttcacagcat
     8461 ctaaatggtt gctgtaaata tgtgcatcac caaatgtgtg gacaaattcg cctacttcaa
     8521 ggccacattc tttcgcaatt aaatgtgtta ataagctata gctcgctata ttaaacggta
     8581 cacctaaaaa aatgtcggcg ctccgttgat agagttgaca gcttagctta ttatcttgta
     8641 cataaaattg aaagagtgta tgacaaggag gtaacgccat tgtctcaatt tcagtaggat
     8701 tccaagcact aatgatatga cgacgtgagt taggattcgt tttaatttgt tcaattagtg
     8761 ccttcaattg atcgtattgt tgaccgtttg cactaaccca gttacgccat tgcttaccat
     8821 aaacattgcc taaatccccg tgctttttca taaaatcatc atcagttaaa atctgttgtt
     8881 taaactttgt catttcttcg cgataagttt cagcaaatgc cgcgtcactt tgtgctctat
     8941 gaccaaagtc agtcatatct ggccctgtgt aatcttcgct ttgtacatat ttttcaaaag
     9001 cccattcgtt ccaaatattg ttattatatt gtaataaata tcttaaattc gtatcaccac
     9061 gaataaacca aatcaattca gttgcaacaa gtttaaaaga aacttttttt gttgttaaca
     9121 atgggaagcc ttttgaaagg tcaaaacgca actgatgtcc aaattttgaa attgttcccg
     9181 tagctgttcg gtcatcacgt tgattgccaa tttctaatat ttctttacat aaatcgtgat
     9241 aagctgcatc aaacggattc atgacattca cctctttctc ttagtatcta taatagacga
     9301 ttttacgcca ttttcaaagc gatatcaacg tatgcgcagg tataagtgta tagctacaga
     9361 atccgaatat attcagtatc tctaccttgt aaatgttaaa atgatgtgaa tagacacctt
     9421 ttgtcgaaaa cactatctat tgatttagaa gtgtaaaaaa aggattggga catcaacaat
     9481 tatgatgcta ttgatgcaat attttagtta aacttgtcct cactatgatt tgtaattttt
     9541 gattgctttc atggatccac ttacctaagg gctaaccctt caacttagtt cagcttgatt
     9601 gaagtgttca tttgatggaa gccgaattgg attttaggag cagtacagaa atctcatgtg
     9661 aaataaagat tttgttgtac tgccccagta tggctgttga gacttctcaa aagcgatagc
     9721 attgagaagt cagacaacta ctgcgataaa caacattcgc tattatagta aagaagtgac
     9781 agttagaagt atccaccacg cattcactcg tgagtttcgg ccttctcggc aatcttatat
     9841 caaatacagt gaaaatgagg tcaagtttat gaaataaaaa aacaatagca tcaatttttt
     9901 ctatctcatt cagtctcatt ttccgactgc tttaaagtta ttaatgaatc atcaatctat
     9961 gaaaagattg aggtttaatt tttttatgtc tcatcctaac cccttggtat aaataacaaa
    10021 atatagtaaa ggagctgagg aaacttaatg ccccagctcc ttgttcatta tgcgcgacaa
    10081 tgtgtgtcga atgcgtcctt aatgtccatc gcgatgtcat taatatcacg gccttcgata
    10141 tgttcacgtg gaataaagtg aacgagctcc gaccctttga ataatgcaaa tgaaggactt
    10201 gaaggcactt gttgaatgta ttcacgcatt tttgcagtcg cctctttatc ttgacctgca
    10261 aaaacagtga ctttattcgt tggtttatat tcattttgtt ctgctacagc cacagctgca
    10321 ggacgtgcta aaccagctgc acagccacaa gttgaattaa tcacaacaaa tgttgtatct
    10381 tcatctttga cattgttcat atattgtgaa acggaatctt cactttctaa actttcaaaa
    10441 ccattttgtg tcaattcgcc tctcatttga gcagcgagtt ctttcatata agcatcatat
    10501 gcgttcattt tatagtgctc ccttgtattg atttattgat tacgatttgc gatctgtttc
    10561 cacactgatc caagtgctgc ttccccgttt tcgatacgtg taatggccat ttcaatttgc
    10621 aacttcactt cataagctgg atcgttttga tgcgctttga gtgttaccag ctgttctggt
    10681 ccaccttcat caaaaagaaa catcgctgca cgccatcgca caattttttg tggatcatcc
    10741 aaggcttttt ccatttcagg taaagcctct ttaaagccta aatcacttaa actatcacca
    10801 gctgttcgtc tcactgcagg acttttgtcg tgcagccctt tatataagta tggcaaagtt
    10861 tctcgatctt caatcatgct aagcaatacg actgcttcac ggcgtaatgg cactttatcc
    10921 tcatttaagg cataatcaag taatggatag tcatcacttg taggtgttgg gaaagacttc
    10981 aacatacgta atcgtgcttt ccaatcaatt tcttgttgat atgtttctaa tgtcacgtgt
    11041 tcatattgtt tctgtggcac tgtaacatca gtatttttcg cctcttgcac gagtagattc
    11101 aaaacatgtt caggataaag cgcattgatt tcttctacaa cactttgcat gacgtcatct
    11161 aaatcgccat aacggacacc taatgtttcc catttacgta aaaagacaac attatcatgc
    11221 ggttgttgtg cttcgagcat cgcattgacg aatatgtcgc tcaattgttg acgattttcc
    11281 tctttaggtg ttgtcagttt cacttgataa ggaatgtttt taaacttaag tacttccgct
    11341 ttaacctcac caaaatgagt atccggttca ggttgcgttg tgtcgctttg ttgttggtct
    11401 tggttgagtg tcgccgtaac gagaggtaac acagtctccc agtctgcctt aggtgcttta
    11461 tcaacggcaa taaaatctaa tacatgaaag acagatttca cacctttaac ttgtaatatg
    11521 gcgttgataa agtgtggctg actatctgtg acctccgtat aagtttttga atgattatct
    11581 tgcctttttt cggataaaat aattttcatc gtattcggac taggcgtagg ttcgacctta
    11641 ataatttcca tgttaaacct cctcgtcaat gtactacagc cctcattgta gcgcattgcc
    11701 taattgttga atttgtttgc cgattgaaca cgcattgata cagaagtgat gtgcttgtgt
    11761 tttccctttt gtctttcgaa ggtgcgcttt aaccaagcaa tgttcacaat attgttgaga
    11821 taaatgatcg attgaagcaa tggccttctt ctcagagtct gttagcacgt aagtcacctc
    11881 ttttaaatat agtgtgtaca atatgcacta tcgtaacatg atttgtatgg acattgaagc
    11941 gtttaatctt cagcgacatc aagaaacatg acatgcctat aaataaaaac ggaaggctat
    12001 tgaaaaatat aaagctgttg attataatgg aaaagttatc gtgaagagcg gtttctaaac
    12061 acccgctgta acaaaattta ggaggtcatt aaattgtata atgaatggtt aggtttaggg
    12121 tcgtttatcg tcacattcgt actcatggta gtgatgtttc gactttttgg taaatcaggt
    12181 ttgtatgctt gggttgcgat aggcacgatt attgccaaca tccaagtgct taaaacagtg
    12241 gatatattta cgatttctgc aacgttagga aatgtgatgt tcgcatccat ttatcttgca
    12301 acagatattt taaatgatat ttatggtcgt aaagtcgcga aaaaagcggt ttggcttggc
    12361 ttttcgtcta cttttattat gattatcgtg atgcaagttt cgctcgcgtt tcaaccgagt
    12421 gaagttgaca tggcgcaaga tgctatgaaa gcaattttcg atgtcgttcc acgtatcgct
    12481 ttcgcatcca taaccgctta cattattggt caacatatcg atgtacttgt ctttaatatg
    12541 attaaaaaag tatttcgttc agatcgtacc tttttcattc gtgcctatgg gagtacaacg
    12601 ttgagttcga ttgtggatac agcgcttttc gtaatgattg ctttttatgg tagtttaccc
    12661 aacggtgtcg tactagaaat tttcatcacg acgtatttat taaaattatt aacaactgtt
    12721 ctgaacgtcc cattcggtta ttgggcaaag tcactttatc gtcgcaacaa aattaaagac
    12781 gatacgctat gatacatgat atggtaagct taaatacgaa aatacattta agtgtggtgt
    12841 cgtgaagttg gctaaaatat attttgatgc agcaacgaaa ggcaatccgg gattaagtgc
    12901 atgtggcgtc gttatcgtta cagaaaatga acgctataca tttacaaaag tgctcgatgc
    12961 gttagacaat catagtgctg aatgggaagc gttgctgttt gcattagagc aagcacaaac
    13021 attggcagtt ttgaatgcat tagtttttac ggattcacag ctaattgaag atgcagtgaa
    13081 tcgtgagttt gtgaaaaatg gacgttttaa accttatttg gagcgctatt tacaaatgac
    13141 acatgatttt gaattggcat ttgtcaaatg gattccacgc gcacaaaata aagctgcgaa
    13201 tcagttagct caagatgcat tgtatcaagc gttaggtcgt tcataatgtt ataaaaaatg
    13261 tcgaagtgtt atgcacatgt tcacacatgt cacacgcttc gacatttttt aataaggaaa
    13321 tcaatgttag ctagtatcgt ctaatctttt ttccttgctt tgtttaattt taagattaca
    13381 aattttgaac aaatcgtttt gaaacaaaca actcatgctc atctaatact gcgagtacgt
    13441 gatttaactc gacttgatgt gccatttgct cgaataacgt gtcgatggat aatgggacat
    13501 tcaattcaat cgttgccagt tgttttgaca aacgtagatt ttccatattt tgtgctatct
    13561 ttttctgttg tccaggcgta agctgtgaca cattcgcaat cacttcctca acagagccat
    13621 attgctgaac cagtttaatc gctgttttct caccgatgcc ttttacacct ggataaccat
    13681 ctgctgtgtc tcccataaac gctttgactt caatgagttg tggcggttgt aattgatatt
    13741 ctaattcgaa tcgcgctctg tcatacttac tatattcagt aaatcctttt ttgatgagcc
    13801 atacataaac gttgtctctc acacattgta ataaatcgcg atccccagta atgatataaa
    13861 cttcgtggtc aggtgattgt gcatatgcat gtgttaacgt cccaatgaca tcatcagctt
    13921 cgtagttttc aacgccaata tttaaaaagc ctagcgactc agaaatatgt tggacatggt
    13981 cgaattgtgg gataagctct tcgggcggag caggacgatt ttgtttataa ccatcaaaca
    14041 tgtcattacg gaaggtcgct ttccccatat cccaacatat tgcaacgtgc gtcggttcaa
    14101 catcgcgaat cgcactgtaa acatgtctca caaaaccttg cgtgccgttt gtcggtgtgc
    14161 cgttcgtatt gcgcataaaa tttttgtgta cactcgttgc ataaaaatga cgaaataata
    14221 acgccatgcc atcaattaat aaaagtttgt gtgtcatgtt ttcagtcctt tgaattcagt
    14281 attgtcagta attttggtgt ttctacttgt agttgagcaa tcagtgcatc atccacttcg
    14341 acagctaaca cagtatcgat ttcacgttgt gcttgtgact caatctgttc tagtgcttgc
    14401 tgtgcctgtg ttgtgagagt atcgagcata ctttcaagtg cttgtcgtaa atcagctaat
    14461 cgtggttgga gtaacgtcac tgtttcatct ttaatgtcag cttgtatttg tttttgcact
    14521 tgtggctgca taatgttttt ctttgtcaat tgtttcggaa gtgcgttgac catgtcatca
    14581 aaagaaatcg ttaaaaatga ttggtctaca ggcgcaactt caatcgtttc aatatctggt
    14641 aaaagtatgt gatattgttg gaatgatcta attttcgttg ccatttcttg ttgaaatgct
    14701 aggttaaaga aaaatttaat acgctcaatc atcaatgttt gttctaaata taacttttga
    14761 tggatttgat tcaaatacgc ttttgtcgat tgtcgttttt cctcattgaa acttgttgta
    14821 ttcgtcattt gtgtattata aatggccttt acattatcta ataattgaat ttttaaacgc
    14881 tcattcaagt gatacatttg atcttctatt tcgttaatca gtttttgacg aattgcagtt
    14941 aaactttccg aattaaaaat cgttgtttga cgcatctttt gtaattgttg tttaacatgt
    15001 tgcatttttt cagcgtttgc agtatggtct tcaatcattt gtgtgtaaga ctgcccgata
    15061 gaacgtaact ggtcatacat tttggcttct aaaatatgtt tggattcaac ctctgaaaac
    15121 cgtgaaatgc tcgctttcaa ttgttgcaca ccggcgtccc ctttagttaa agcagcacga
    15181 cttgatacag aaaaaatttc aggttgcatt tgtacttgca ttaacgcatc tgctacatag
    15241 tcacgcacag cacgtttatc aacttcattt tcagctaaat cggttgcatt gatgaccatt
    15301 ttgaaagcct gttgttcttt taactgattt atatttttca tatgttcgat aaacgcttta
    15361 tcattgtcag taaaagcgtg attaaaataa ctcacatata aaattaaatc agaggttgtc
    15421 agtattttct ctgtttcatt cgtatgtcgt tggttattcg aatgtaaccc taatgagtcc
    15481 acaatcactt tgtctttcaa ccaatctagt ggcaatctta aatgcaccgt ttggacgaaa
    15541 gtcgcatatt catcttcagc actccatttt tgtacgtcag tagcttgaat ttcatgtttt
    15601 aaaccttcag cgatatacga ttgatacagg gcataattct tttcaatcgc atgaataaat
    15661 gcaagacggc ttttgtctat gcgccctttt aatttttcta tgttcgcttc taaaaaggct
    15721 tcgatactgt caaattgttg cccttcaagt tcaaacacat cattaatttg ttggagcaac
    15781 atgtctggtg ttttaaacgt aacgtgatac gtatcgccat agccaatctc agtagttgcc
    15841 gctgttgtcg ggttaggtga actcgtcaaa taattgtccc ctaataatgc attaatcaaa
    15901 ctacttttac cagcgctgaa tgtaccaaaa acacctattt taacggtttg atgttgcatt
    15961 ctttcctgtg tttcctcaat gttttttaca cttgatttaa acaatgggat atttttgaca
    16021 atatctaatg cttgggtcat ttgtgcgtcg ttaatcgggt ttttctcagc tgtgacaaca
    16081 tcctcttgtt gttgcacatc ttttttatta tcttcatttg atttcacttg atattgaatt
    16141 tctgtgcgat cgatcaaacg gtccagcgaa tcttccatat gaatataata atgacgataa
    16201 ttttctgtct ttaacgactg agacaagtta cgcaattcaa tataacgtgt atacgccgaa
    16261 ctatcatttg attcatcgac gaggtgctct tctgcgtgga cattgtcaat aatggtatca
    16321 tcaagtggtt cgagttcttt taaaatatag tgcttgatag ctttcatgac atcatttgag
    16381 aaagttaaca catattgatt cgttatttga atttgtgttt gatacaaatc ggttataatg
    16441 gatgtcggta atgtcaattt ttggtttaaa atacgctgat tcaaatcggt atcattaata
    16501 aaacgtgtga gaaacgataa atcttcttgc atcggtttaa tgatttggtg atcaacttta
    16561 ctttgaagtg ctatcattaa ttcattaagg cgtgtttgac gttcttcttc tgtttttttc
    16621 tttttattaa acagtccagc ggctttaaaa tctttcgtca tactttccaa acaataacga
    16681 atcgtttcac gcatgtcgtg tgtcataata tacgcattat caattatgga gcgacgttta
    16741 tcttttaaat aatgtttcaa cgctaccgca tcattcaaca attgtgcttc ctcgctgatc
    16801 atttcatttt gttgatgtga ttgatacgct tgatcgaatt gtgtcgcttc gatgttgagt
    16861 cgttctaaaa tttcatccat ttcatgttgt aaatagttca attgatgttg atgaataaat
    16921 tgtttcatac gtgcaacata gtctttcaca gcttcacggt gctgatcttg ttccataata
    16981 aaggcgcgta acgcatcgaa ttgattttgt ggatggtcaa actttgtaat ataaaatgtt
    17041 tcgagtaaat caatatccca ctcactcacg gattgttcca cacgattttg aaatgtttga
    17101 aatgtgagtt cgttttcgtc atgtttatca atttggttaa taacgaaaac gactggaatg
    17161 cctgcacgat tcagacgttt cataaattga aagttcagcg cggattgtac atggttataa
    17221 tcaaccgtat agaaaacgat attactcgta tacagaaatt gctccgtttg catattgtgt
    17281 gattgtacat tggaatcgac acctggtgta tcttgaaatg taaaaccttt atgaaacgca
    17341 tcactttgaa tacgaatgtc aatggactca acgtgaaaat tttcgcggtt catttgtttg
    17401 acatcatcat aagaattcaa ttgtgtatac ttttgacctt cgatgttcgc tgtaatacca
    17461 ggcgcctctg caattgttac taatgcagta ttactcgttg tcggaacggg tgagcttggt
    17521 aaaatgtctt ggccgataag acgattaatg accgtcgatt tacctgctga aaaatggccg
    17581 acaaaggtca tagtgtagtg atttagatac acctttttaa tcatttggtt aatcgtatgt
    17641 ataaaagcgg aatgatcaga tttttccact tcttttttta gtttatataa aatatccagt
    17701 tgttcttgat tctgcataga tattggattc cccttgtttt aaacgtcttt atttaagtat
    17761 tatatgagtt tatggcgata aatgctattg ccgtgattaa aaataatggc attttaatat
    17821 gagattgaag gcaaaaaata acatcgcaca gtcaatgtac gatgttagct tatattttgg
    17881 ttaattttga tattggaatg attgtggacg ctttttaatt ttgaggattt gagaaatgac
    17941 ataaatcacg ataccgaccc aaataaagca aaatgtaata aattggtcga cattaaatgg
    18001 ttctttaaat acaaaaatac caagtataaa gatgagcgtc ggccctacgt attgaataaa
    18061 gcccattaat gataacggaa tacgaatcgc cccttctgaa aatgagagta acggtaatgc
    18121 cgtcacagcc cctgaaaaga gcaaccaaaa tgtcgacata ttccatccga tacttaaatc
    18181 agctgtttgt ccaacgataa ttaaataaat gatcgccatg ggtgccgtcg ccagtgactc
    18241 aatggtaatg ctactcaatg ctggcatagg aacgagtttt ttcagtaaac cataaatgcc
    18301 aaatgaaaaa gctaaaatta acgaaatata tggaaattcg cctactttaa aagtcatata
    18361 aacgacgcca agtacagcaa agagaatcgc cacccattcg agacggttga aacgttcttt
    18421 aaaaaatatc atggataata aaatgctgac gagcggattg atataatacc ctaaacttgt
    18481 ttgtaataca aaaccagcat caatcgcata aataaacgtg ccccagttca ccgtcacgat
    18541 atagcctgct aaaatgataa tcaatagttt gaacggtttc gcttttagtt gcgccatatc
    18601 ttgagcaaaa cgctgccatt gcccaatgat gggtaaaagg agcagcataa aaatgagtga
    18661 taaaacgatc cgatacatga gtgtttcaat cggatcgacg tcgtgaatga gtgcccaata
    18721 taatggcaaa gttccccaaa tgacataagc caataaagcg aaaagaatgc cttttttaaa
    18781 ttctttatct tgatacaaag tactccctct tttcgtaaaa attaaaatgg cttacgattt
    18841 tttatttgcc caatattgat aataagttgt ttcaatatag ccgttaaaca acttacgacg
    18901 ctttgtagct ttacggtttg cgagatattc aaattctttg ttacttgtca taatgtaaag
    18961 tgacaaattc gggtggtttt gcatgagaat gccgagatta cggtacattt cttcaacttc
    19021 tgcacggtca ccaatacgtt caccatacgg cgggttaccg attagaccaa ttggaccgtc
    19081 gtgattaatg gtaagggtgt tcacatcttt gacttcgaag cggataatat caccgacacc
    19141 gacctcatct gcattgcgtt gtgcaatttc aaccatttca ggatcgatat cagaagcgta
    19201 aatttcgatt tctttatcat aatcggcgag ttcatcagct tctgcacgtt tttgatcata
    19261 cagccctttt ggaatgatat cccattgttc tgaaataaat gaacgattaa acccaggtgc
    19321 gatattttgc gcaattaaac aagcttcaat cgcaattgtt ccagaaccac aaaatggatc
    19381 tataagtggt gtatcacctg tccaattggc taacttaact aaacttgcag cgagggtctc
    19441 cttaatcggc gcctcacctt gcgccagacg gtaaccgcgc ttattcaaac cggagccaga
    19501 tgtatcaatt gttaacaaga ctttatcttt taaaatagcg acttctacag ggtattttgc
    19561 gcctgattca tccaaccaac ctgacacttg atgtgcattt ttcaatcgtt cgacaattgc
    19621 ttttttagta atcgcctgta catcaggaac actaaataac tttgatttta aactacgtcc
    19681 ttgtactgga aattgaccat ctgttgggat gaattgttcc catggtagat tttttgtttg
    19741 ttcgaataat gaatcaaagg ttacagcttc aaattgtcca acgataagtt tgacacggtc
    19801 tgcagtgcgt aaccataaat tggctttaac gatggcagat gcgtctcctt caaaataaat
    19861 acgtccattt tctacgtgtg tgtcgtagcc taaatcctgg acttctttcg cgacgattga
    19921 ttcaagcccc attggacaaa ctgctaatag ttgatacacg aaaattcctc cttttgaata
    19981 ttggtttatg tactaaattt tcatcattgt ttttatattt atttaattta ttatgttatc
    20041 gatattcggt tttattgttt gcgcgcttgg gttctcattc tttattcagt tcaacagtcc
    20101 gctacgcaaa agatttctat gtgtctatag taaagataag tcctctctat tgatactgat
    20161 tcttatttca tgagttgtca agacaaactg aagggctgga acgtcttgtt ccagccctaa
    20221 ggtgactagt ctgagatatt tctataagcc atgttctgta ctgatgtact cattacgtgc
    20281 actagttaca ctggtacttc agttgtaatc atctgtctga aaagtatgct gtacttttcc
    20341 tcgtctatac gttgaattcc gttagacaag tgctcctacc aaatttggat tgctcactcg
    20401 aggggtttac cgcgttccac cttcattatt tctaataaag ctacgtcact gtggcacttt
    20461 caaactaatg taaccgtatc aaaagactta ggttaggtcg ttgccgtcaa tatcgaatat
    20521 tgccttgact tattgtttca tcaagcacga acactacagt catctcagac tgtgtgagca
    20581 tggactttcc tctatatgtc gtaacatata gcgattacac gaaatatcct caaaaaatta
    20641 tagcattttt caattaaaaa acaatcccta ttttccaaag actgcttttt c
//
LOCUS       DANHPA010000042        20338 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.042, whole genome shotgun sequence.
ACCESSION   DANHPA010000042 DANHPA010000000
VERSION     DANHPA010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 20338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20338
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.042"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            15..1181
                     /gene="norA"
                     /locus_tag="PTC28_001205"
     CDS             15..1181
                     /gene="norA"
                     /locus_tag="PTC28_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter NorA"
                     /protein_id="HDK5716498.1"
                     /translation="MKKQFIILYLNIFLVFLGIGLIIPVLPVYLKDLGLTGADLGVLV
                     AVFALAQMLISPFGGTLADRLGKKLIICIGLVLFSISEFLFAWSHTFSLLIVSRVLGG
                     FSAGMVMPGVTGLIADLSPPKDKARNFGYMSAIISAGFILGPGIGGFLAEISHRLPFV
                     FAGVLGVLAFICTLFFIQSPKRATTQGFAQFDSTEFGKINYKAFITPAILTLILAFGL
                     SAFETLFPLYTADKMDFTPGDISIAITGGGIFGAIFQVFLFDKMIRRMSELVFIIYAL
                     IYSAFVLMLLIFAHSYWQVMLICFIVFIGFDLIRPALTNYFSNIAGNRQGFAGGLNST
                     FTSMGNFIGPLIAGGLYDVNIEYPLYMSITFMLLGCIVILIEKQLRRHQNLKQS"
     gene            1319..3643
                     /locus_tag="PTC28_001206"
     CDS             1319..3643
                     /locus_tag="PTC28_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol--glycerophosphate
                     glycerophosphotransferase"
                     /protein_id="HDK5716499.1"
                     /translation="MHIKILGYNIFQKGGTTRSNLNLIQSFLRAGHQVTYVNYMHFRQ
                     RQVSQLKAEEGQAIEGAQFIAFRGAQTLAQADLLILTREDFFEFAREVKHRTSEMRIL
                     GEIHSPLAYLNPQMDLALEAIDAVRVSTPKIAEAFQERYDYPYVFPMYVNHQHVQFQT
                     QPVHQTHNLLMKARFEDEIKDISYVLKLMRYFVYTQGETRIHLYLQGYGPSLELYENL
                     VVAYHLEDYVHINGSEPTDYIYVSTSPYETFGYSILEAMAQGNRVCLYPGEDGVLKDI
                     YAPFHAVTWITKSLESDAAKIVEMVNGKYTDTEREADVETFHTQLAQGHDTEALIAQT
                     MAMAAAHTIDVSQIAKPKMKASYQYVQNTAKRVVVKVKETAEQAPKSPFRKGSRLYQF
                     TRKGLFNVEAQVKKFQNQRRHVSGQAVFIESFHGKNFSGDPKAIACAMKRLYPELTIY
                     VSAADPLVEMEVRSYDMTPIRFGTRAYMRAFERCRYAVINGNLWDRLVKHPDQQVIQT
                     WHGFPLKRMVNDLVDAVERQKQAQQFAPRMQKWNVLLSISERYETYIRSAFRLDTHPN
                     LTILRHGAPRNSLLIRHQNDEAKWLEIQEKYFFQRDATKKYILFCPTWRKNARQSVSE
                     LDIVALLERLPSSYEMIVKLHPNEGHLRELYQNLHPRVHCFFNEMVDIQELYLISDVL
                     ISDYSSAMFDYAHLNRPILILDEDTVDYQQDVGFYFDMTEFPSIQKVTPDVEKIQQYI
                     ETTSSVDHQKVIAQLMTYDQSDSDEQVVRSIFAR"
     gene            3666..4145
                     /gene="ybaK"
                     /locus_tag="PTC28_001207"
     CDS             3666..4145
                     /gene="ybaK"
                     /locus_tag="PTC28_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HDK5716500.1"
                     /translation="MAKQKKTNAMRQLDRAKVNYEIRTFEVGEGHLEGHEVAALINAN
                     SAEVYKTLVLENANHEHFVFVIPVTAHLDMKAAAAAVHEKKLHLMPLDDLKKVTGYIR
                     GGCSPIGMKTHFPTVINGTIELLDRVFVSAGQRGVQMGLAPHDLIEMSHAEVKQVIQ"
     gene            4298..4474
                     /locus_tag="PTC28_001208"
     CDS             4298..4474
                     /locus_tag="PTC28_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VraH family protein"
                     /protein_id="HDK5716501.1"
                     /translation="MKVRDYFERVKENLLDMKIGSKSFVIMIVSMVLLSMIFTPFIGI
                     PAGAVIGSYAYERY"
     gene            complement(4520..4723)
                     /locus_tag="PTC28_001209"
     CDS             complement(4520..4723)
                     /locus_tag="PTC28_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716502.1"
                     /translation="MLKSRKERLTAAIISLIISIAFVVLDIFNIMTKESNTALILSIS
                     SLLVFWTFIVIDIYVLYKLKKEA"
     gene            5306..6058
                     /locus_tag="PTC28_001210"
     CDS             5306..6058
                     /locus_tag="PTC28_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDK5716503.1"
                     /translation="MLTEKRHELILTALDQHQFLSLQHLMEFTGSSASTIRRDLSKLQ
                     DDGKLTRVHGGAKLISEQKEPELHEKRTQHIDEKVEIAKRAAQLVNDGDCVYLDAGST
                     TLEMIPFLTAKDITVITNGLPHVEALLKKGIATKIIGGDVKANTLAVVGSRAVSFLQH
                     YRFNKVFLGVNGIDCEAGLTTPDEREAIVKETAMQHAQQVYILADTSKFNQQYLAAIH
                     ATEQPILITSEKARHMRHFDIYDNHFEILGGK"
     gene            6058..6981
                     /gene="pfkB"
                     /locus_tag="PTC28_001211"
     CDS             6058..6981
                     /gene="pfkB"
                     /locus_tag="PTC28_001211"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HDK5716504.1"
                     /translation="MIYTVTFNPSIDYVMFVDDFAAGALNRTTAIAKFAGGKGINVSR
                     VLQTLQVPSTALGFIGGFPGQFIENTLKEEGIHTAFTQVDEDTRINVKLKSQTETEIN
                     AAGPHITETQVATLFEQLHVTTAEDIVVVAGSVPASLPDTIYIDIAKIAQQTGAKLVV
                     DAEKSLIEGILPYYPLFIKPNQHELEAMFNTKIETDQDVLTYARRLVDKGAQSVIVSL
                     GGAGAIYADREVAYKIQAPQGQVVNTVGAGDSTVAGMVAGISQNLALPEALKLAVASG
                     SATAFNDDLAQYDMIQELQAHVTIQPLNEEG"
     gene            6983..8881
                     /locus_tag="PTC28_001212"
     CDS             6983..8881
                     /locus_tag="PTC28_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDK5716505.1"
                     /translation="MRITELLTKETIAMDLSATTKDGVIDQLAQQLNQAGKLNQLDDY
                     IAAIHKREQQSSTGIGEGIAIPHAKVEAVKTPAIAFGKSKAGVDYDSLDMQPAHLFFM
                     IAAPATGAQTHLDALAKLSSVLMDENVRQALLEADSTEAVLAIINKADDEATDDDTEA
                     AAEPAPVDHNEPYILAVTACTTGIAHTYMARDALKKQAEEMGINIKVETNGASGIKNR
                     LTQEDIERATGVIVAADVHVETNRFNGKNVVQVPVADGIKRPESLINTALDTTRRPFV
                     ADNRQNTNDEDEKLSVGKAIYKHLMNGVSNMLPLVIAGGILMAIVFMIGPNAMDPKSS
                     EYNAFAETLWNIGNKSAFALIIPILAGYIARSIADKPGFAAGLVGGMLAVSGDSGFLG
                     GIIAGFLAGYLTQGIKKATQNFPQMLEGLKPTLIYPIVSVTVTGLLMIYVFNTPAAWL
                     NNALISGLNNLSGSNVVILGIVLGAMMAIDMGGPFNKAAYVFSNAALTAGNVAPITAA
                     MVGGMVPPIALAIAMMIFRSKFTKEQRGSIIPNFVMGASFITEGAIPFAAADPLRVIP
                     SMMIGSGVAGGLALLFGSNINAPHGGLVVIIGTDPSHALLTLLAILIGAVVGAVIYGM
                     IKQSPNKA"
     gene            9300..10655
                     /locus_tag="PTC28_001213"
     CDS             9300..10655
                     /locus_tag="PTC28_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HDK5716506.1"
                     /translation="MDSTTILYLFIFFALIALTTVFVGSEFALVKVRASRVEQLIAEG
                     NGNARVVKKMISNLDYYLSACQLGITVTSLGLGWLGEPLFERILHPVIELLNIPDALV
                     MTVSIVVAFTVVTYIHVVIGELAPKSLAIQYTDRIALLYARPLYYFGLIMKPLIWLMN
                     GSARFIIRIFGADPNAGNEAMSEEELKIIMNNSYHGGEINQTELAYMQNIFSFDERHA
                     KDIMVPRTQMITLNEPFNVDELLETIKEHQFTRYPITEDGDKDHIKGFINVKEFLTEY
                     ASGVPIKISNYIHELPMISETTRISDALVRMQREHVHISLIIDEYGGTAGILTMEDIL
                     EEIVGEIRDEFDDDEVNDIVKLDEQTYQINGRVLLSDLEEMFGIVFEDSEDIDTIGGW
                     LQAQNTDLEQDDFVDTAHDRWVISEIENHQIIHVLLRYEYNDSRIKNEDDEDDYLKDE
                     S"
     gene            11472..12452
                     /locus_tag="PTC28_001214"
     CDS             11472..12452
                     /locus_tag="PTC28_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDK5716507.1"
                     /translation="MKLRVIVPCFNETDVLHQTIQELTEILEKDSLDQSYDYDMLFVD
                     DGSQDDTMTLLQQAAAQSPHVKFISFSRNFGKEAAMIAGFEHSTDCDAVVMIDADLQH
                     PPELIPEMVQAYREGYDQIIAKRNRAGEHASRKWVTRLYYKMINYFIEDIELEDGVGD
                     FRMLSQRAVCSLVSLKEYNRFSKGLFSWIGYNSKVIHYENVEREAGESKWSFRSLLNY
                     AIDGLISFNYKPLRTMIYLGLLIFGVSMIYIIYLFIDTLIHGVDVPGYFTMIAAVLFI
                     GGIQLVSIGVIGEYIGRIYYEVKQRPKYIVEASNVGMPKSHNETKQDVSI"
     gene            complement(12625..12879)
                     /locus_tag="PTC28_001215"
     CDS             complement(12625..12879)
                     /locus_tag="PTC28_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016424461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HDK5716508.1"
                     /translation="MGFIVMLIVGGLIGWAAGAILGKDIPGGIIGNIIAGLVGSAIGS
                     WLLGHWGPEFGGVYILPALIGSIILIALASLILGKMRGKK"
     gene            complement(12949..13548)
                     /locus_tag="PTC28_001216"
     CDS             complement(12949..13548)
                     /locus_tag="PTC28_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716509.1"
                     /translation="MALFVILNIIIVVGVFLIDMYRHQYQYVRLSAFLFAITVNSLLN
                     PILLNQLNFITMSSFLMYFIWFILQIYLDRHVRTFKIHNQKFFAGITAMIISILFVVM
                     TQTADQTIYMSVPYLAPAIFLFGAILQFSSVLHSPRFETFYRRLKMENPLFIGACFIV
                     ASMILMMLLTPFWYLYLIIYACLILIFLLEQIFILEKDD"
     gene            complement(13696..14409)
                     /gene="queE"
                     /locus_tag="PTC28_001217"
     CDS             complement(13696..14409)
                     /gene="queE"
                     /locus_tag="PTC28_001217"
                     /EC_number="4.3.99.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002445901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HDK5716510.1"
                     /translation="MAKIPVLEIFGPTIQGEGRVIGRKTMFVRTAGCDFRCSWCDSKF
                     TWDGSMKDDIEMMEAEEILAQLRNIGGNRFNHVTISGGNPALIKGLQSFVDLCEANDI
                     RTALETQGSQFKPWMRQINDLTLSPKPPSSGMQQNLPRLDEVIEQLDISRINLKVVVF
                     DDADYDFAKMIHQRYPDIPFYLQVGNPYLEEHVEQHTAKLLDRYEQLIDRVTADAEMN
                     EVFVLPQLHTLIWSNQKGV"
     gene            complement(14402..14833)
                     /gene="queD"
                     /locus_tag="PTC28_001218"
     CDS             complement(14402..14833)
                     /gene="queD"
                     /locus_tag="PTC28_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HDK5716511.1"
                     /translation="MMQQMYPQVDHDYMFELNKDFNFSAAHFIPDERAGKCTRVHGHT
                     YFVNLTIGGDELDSMGFLINFSELKSLIHDQFDHYLLNDLVPFQGKSPSTEIVAQTIY
                     DIVSARLAELPNAPKCLQVFLRETPTSYVIYRPKKKEQRHG"
     gene            complement(14833..15501)
                     /gene="queC"
                     /locus_tag="PTC28_001219"
     CDS             complement(14833..15501)
                     /gene="queC"
                     /locus_tag="PTC28_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HDK5716512.1"
                     /translation="MSEVLNNEKALVVFSGGQDSTTCLFYAKKHFKEVELVTFEYGQR
                     HAKEIEVAKEIAEDQGLKHHVLDMALLSQLTPNALTSHDMTIDSHNDVPNTFVPARNL
                     LFLSFAGALAYQIGAKHLITGVCETDFSGYPDCRDSFIKSMNVTLNLAMDRDFVIHTP
                     LMWLNKKETWALSDDLGVLDYVRDRTLTCYNGIIAEGCGECPACQLRQRGLNQYLAER
                     GREV"
     gene            15762..16355
                     /locus_tag="PTC28_001220"
     CDS             15762..16355
                     /locus_tag="PTC28_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HDK5716513.1"
                     /translation="MIVMIDNKDSFTYNIVDYVEYERQQPVTVIDVEAVSIEKLKEMQ
                     PTALIISPGPGAPEDYPILFEVVKAFEHTTPILGVCLGFQLLVTYYGGKIIHAPRPVH
                     GHTTRISHDQSPLFQGLPEQFEVMRYHSLMADPMTIVKPLVVSAQNEQGIVMAVRHMS
                     RPIDGVQYHPESILSEYGHEQIRNFLRKAEVSYGCEV"
     gene            16339..17487
                     /locus_tag="PTC28_001221"
     CDS             16339..17487
                     /locus_tag="PTC28_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HDK5716514.1"
                     /translation="MVVKFNYKYYNDPNTTTTYQYHFDQPLHQGVARELKKVGQIIEA
                     ATQYQQQGYYVALYLPYEAAPYFHEDFQTYTPDNGIYAAYYAFDAPVDAIQATTAERS
                     QRRQGGQFQFMDDKHTITKHIRTIHDEITAGWTYQVNYTTRLKSFDQMSISALYDQLT
                     QHTNGDYTVLIDTTEVKLASISPELFFQVGDFGNQGRTVVSKPMKGTMPRGTTVEEDE
                     RHAQALRQSEKDRAENVMIVDLLRNDIARVAKRGSVKVYHPFAIERYQTVFQMTTMVT
                     GQITDTATYETLLHALFPCGSITGAPKVNTMRIIHRLETTPRHIYCGAIGLLHPNGRA
                     IFNVPIRTVEQINDTLYYGVGAGITIDSDPEQEYAEFHAKMKILEGLQ"
     gene            17484..18098
                     /locus_tag="PTC28_001222"
     CDS             17484..18098
                     /locus_tag="PTC28_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HDK5716515.1"
                     /translation="MNLFETMRLDNGEIPRLAYHAERLQRASTALGLPFDDIKWQQTI
                     QQLCETYAVGQYRVKVTLEPSGELRTEVGTLQKKTTMTAQFVPMKNDIPEWQRVYKTS
                     EREHVAHSHTTQLALFYDETTNKVLEFDIGNVVLTVNDIHYTPIFDHDFLQGCMRRDL
                     LAEARIKEKYLTTVMVKEALQHGGQLWMINSLREWVPITLESKK"
     gene            18107..18316
                     /locus_tag="PTC28_001223"
     CDS             18107..18316
                     /locus_tag="PTC28_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716516.1"
                     /translation="MIGLYILGFLIVMWIGQIVLQRFVARQRRLWVYLWMGGILIIQC
                     MLIYGFVGELAQHMREILSLFYDEK"
     gene            18327..19010
                     /locus_tag="PTC28_001224"
     CDS             18327..19010
                     /locus_tag="PTC28_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="allophanate hydrolase subunit 1"
                     /protein_id="HDK5716517.1"
                     /translation="MKVYSQGDQAIVVSLQGDVTPVATEKLLLIRHCLINQNYPFITE
                     IVPTETDMLISYDARMMMKHLNIDSPFLHMKAVIENINIEDMTLDKEIRCVKVPIVYG
                     GTNGPHLDMILKELHMDRQTFIDIHTGADYFVSMMGYSPGFPYLSGVDAQIIVNHTAT
                     EPRLIPAGSVILENNKCGITTTETYSDWLVIGHTSLPLFNPKKEDFALISLGDHVKFF
                     EVQAGGNDA"
     gene            19007..20011
                     /locus_tag="PTC28_001225"
     CDS             19007..20011
                     /locus_tag="PTC28_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HDK5716518.1"
                     /translation="MTIIIEDSGLFSSFQDFGREGYEHMGVIRSGALDVLAHEIANRL
                     VGNDRNEATLEMSNQMARIRFTEPTLIALSGAQGVAHTDDMRVQMNKLYLMNKGDVLA
                     VDHLRRGSRLYLAVAGGFELDQWLGSTSTDTIAGMGGFKGRRLQAGDTIELKRDYNAR
                     HHQLFKNLAQRKTVDWGVDGYALSFNYLSDVVHVIPNKGTEDFEAEVLRQFANGEYEV
                     TSKANRMGVVLEGMPIKAHYDDMPPHQSVKRGTIQVKKEGAPVILLNDHYTLGSYPQI
                     GTIASYHLSKIAQKRQGSKIKFQFIDVLQAEQNLVKYHKWRKQLFQGIEFRMQKEMLK
                     "
BASE COUNT         6291 a         3651 c         4428 g         5968 t
ORIGIN      
        1 aaggagtggc gcatttgaaa aaacaattca tcattttata tttgaatatt ttcttagtct
       61 ttttaggaat cgggctcatt attcctgtgc taccggtcta tttaaaagat ttaggactca
      121 ccggggcaga cttgggtgta ctcgttgcag tatttgcgct cgctcaaatg ttgatttcac
      181 cttttggcgg gactttggca gaccgattag gcaaaaaact cattatttgt attggcttag
      241 ttttatttag tatttcggag tttttatttg cgtggagcca tactttttcg ttacttatcg
      301 tgtcacgtgt acttgggggc tttagtgctg ggatggtcat gccaggggtg acaggtttga
      361 ttgcggatct ctctccacca aaagataaag cgcgcaattt tggttacatg tcagccatca
      421 tttcagcggg ttttatttta gggccgggga taggtggttt cttggcagag atttcacatc
      481 gtttaccctt tgtttttgct ggtgtgctcg gtgttttggc ctttatttgt actttgttct
      541 tcatccagtc accgaaacgt gcaacgacac aagggtttgc acagtttgat agtacggaat
      601 ttggcaaaat aaattacaaa gcttttatta cacccgccat tttaacatta attttagcgt
      661 ttggcttatc tgcatttgag acgttatttc cattgtatac ggcggacaaa atggatttta
      721 caccaggtga catttcaatt gcgattacag gtggcggtat ttttggtgcc atcttccaag
      781 tgttcttatt tgataaaatg atacgtcgca tgagtgagct cgtgtttatt atatacgctt
      841 taatctattc ggcgtttgtc cttatgcttt taatttttgc acatagctat tggcaagtga
      901 tgttgatctg tttcatcgtg tttatcggtt ttgacttaat tcgccctgca ttaacgaatt
      961 atttctcaaa tattgcgggg aatcgtcaag gctttgctgg tggacttaat tcaacattta
     1021 cgagtatggg gaatttcatt gggccgctca ttgctggtgg tttatatgat gttaatattg
     1081 aatatccatt atacatgtcg attacgttca tgctcctcgg ctgtattgtg attttgattg
     1141 aaaaacagtt gcgacgtcat caaaatttga aacagtctta gagatgggaa ttaaaaataa
     1201 tttgaaacag cagatatctc acatggcacg tcattacgac attggcgtca tgcgataatc
     1261 tgctgttttc atgttataat gtgggaaatt gaattgaaga agtaggagcg aatacgtgat
     1321 gcacattaaa atattaggct ataacatttt tcaaaaaggt ggcacaacgc gaagtaacct
     1381 caatttaatc caaagttttc tgcgtgcagg tcatcaagtg acatatgtca attatatgca
     1441 ttttcgtcag cgtcaagtga gtcaattgaa agctgaagaa gggcaagcga ttgaaggcgc
     1501 gcagtttatc gcatttcgcg gggcacagac gttagctcag gcagacttac tcattttaac
     1561 acgcgaggac tttttcgaat ttgcgcgaga agtgaaacat cgtacatcgg aaatgcgcat
     1621 tttaggtgaa attcacagcc cgttagcgta cctgaaccca caaatggatc tggcattgga
     1681 agcgattgat gcagtgcgtg tcagtacgcc aaaaattgca gaagcatttc aagagcgcta
     1741 tgactatccg tatgtctttc cgatgtatgt gaaccatcag cacgtgcaat ttcaaacgca
     1801 acctgtccac caaacgcaca atttattaat gaaagcccgt tttgaagatg aaattaaaga
     1861 catttcgtat gtgttaaagt tgatgcgtta tttcgtgtat acacaaggcg aaacgcgcat
     1921 tcatctttat ttacaaggat atggaccatc actggaactg tacgaaaatc ttgtcgttgc
     1981 gtatcattta gaagattatg tccatattaa cgggtcagag ccgacagatt atatttacgt
     2041 gtccacgtca ccgtatgaaa cgtttggtta ttcgatatta gaagcaatgg cacaaggcaa
     2101 tcgtgtgtgt ctttatccag gcgaggatgg tgtgttgaaa gatatttatg cgccgtttca
     2161 tgcagtcact tggattacaa aatcattaga aagtgatgct gcaaaaattg tagagatggt
     2221 taatggtaag tatacagata cggaacgtga agcggatgtc gagactttcc atacacaact
     2281 tgcgcaaggt cacgatacag aggcattgat tgctcaaaca atggctatgg cagcagcgca
     2341 tacgattgat gtgtcacaaa ttgccaaacc gaaaatgaaa gcaagttacc aatatgtcca
     2401 aaacacggcg aaacgtgtcg tagtgaaagt gaaagagaca gcagaacaag caccgaaaag
     2461 tccgttccgt aaagggtcgc gtttgtatca attcacgcgt aaagggctct ttaacgttga
     2521 agcacaagtg aaaaagtttc aaaatcaacg tcgtcacgtg tctggccagg cggtgtttat
     2581 cgaatcgttt catggtaaaa acttttcagg tgatccgaaa gccattgcat gtgcgatgaa
     2641 gcgattgtat ccggagctta cgatttatgt gagcgcggca gatccgttag tggaaatgga
     2701 agttcgtagc tatgatatga cacctatacg ctttggcaca cgtgcttaca tgcgtgcttt
     2761 tgaacgatgt cgttatgcgg tcattaacgg aaatttgtgg gatagactgg tgaaacatcc
     2821 tgaccaacaa gtgattcaaa cgtggcacgg ctttccgctt aaacggatgg tgaatgattt
     2881 agtggatgct gttgaacgtc aaaaacaagc gcaacaattt gcaccacgta tgcagaaatg
     2941 gaatgtcttg ttatccattt cagaacgcta cgaaacttat attcgctcgg catttcgact
     3001 tgatactcat ccgaatttaa cgattttacg tcacggtgcg ccacggaaca gtttgttaat
     3061 tcgccatcaa aacgatgaag cgaaatggtt ggaaattcaa gaaaagtatt tcttccaacg
     3121 agatgcgact aaaaagtaca ttttattctg tccgacttgg cgtaaaaatg cgcgacaatc
     3181 agtgtcagaa ttagatattg tcgcattgtt ggaacgtctc ccgtcatctt atgaaatgat
     3241 tgtgaaattg catccgaatg aagggcattt gcgtgaactt tatcaaaatt tgcatccgcg
     3301 tgtccattgc ttttttaatg aaatggtaga catccaagag ttatatttaa tatcagatgt
     3361 actgatttca gattattcgt cagcaatgtt tgattatgcg catttaaatc gtcctatttt
     3421 aattcttgat gaagatacag tagattatca acaagatgtc ggcttttact ttgatatgac
     3481 ggaatttcca agtattcaaa aagtcacacc agatgttgaa aaaattcagc aatacattga
     3541 aacaacatca tctgttgatc atcaaaaagt cattgcacaa ttaatgacat atgaccaaag
     3601 tgattcagat gaacaagttg tgcggtcgat atttgcgcga taaatgatag aaagaaggta
     3661 agatcatggc gaaacaaaag aaaacaaatg cgatgcgtca attggataga gcgaaagtga
     3721 actatgagat tcgaacgttt gaagtgggtg agggacatct tgaaggtcat gaagttgcgg
     3781 cgctgattaa cgcgaatagt gcagaagtgt acaaaacgct cgttcttgaa aatgccaacc
     3841 atgagcattt tgtcttcgtt attccagtga cagcacattt agatatgaaa gcagcagcgg
     3901 cggcagttca tgaaaagaaa ttgcacttga tgccgctcga cgatttgaaa aaagtgacag
     3961 gctatatacg tggaggttgc tcaccgattg gaatgaagac ccattttccg acagtcatta
     4021 atggtacgat agagctgctc gacagggtct ttgtgagtgc gggacagcgc ggtgtacaaa
     4081 tgggcttagc gccgcatgat ttaattgaga tgagtcatgc tgaagtgaag caggtcattc
     4141 agtaatttga aaaaggcgtg atactttgga acatttgcca tatacaacaa atgtctgaca
     4201 ttgatatagg ccccgggact catgtataca atgcgattcg tgagctatta taagggggta
     4261 gcgaagttaa aaaatgccaa aaatggagtt gtatatgatg aaagtcaggg attattttga
     4321 acgagttaaa gagaatttgt tagatatgaa gataggttct aaaagttttg tgattatgat
     4381 tgtgtcaatg gtgttgttga gtatgatttt cacaccattt atcggcattc cagctggtgc
     4441 agtcattggt tcttacgctt acgaacgtta ctaaatatta atataaaaaa gaaagcgtga
     4501 tacgacggga aaaagtcggt cacgcttctt ttttgagttt gtatagcaca taaatgtcaa
     4561 tgacaataaa agtccagaaa acgagcaaac tactaatact taatatgagt gcagtattcg
     4621 attcttttgt catgatatta aaaatgtcta gaacgacaaa agcgatagaa atgattaaag
     4681 aaatgattgc cgccgtcagt cgttcttttc tactttttag catctttcca tcccccttac
     4741 acctcatatg tattgactac aagtttaaca aaaattcgga atcaaatcga tggaataacg
     4801 aggggcgatg atactgtccc ccccatctaa acttttcaat ggtggtcact gttgaatcgc
     4861 tttttaatcg tatagaaaag atatgcagca cctagtgcac atagtacgac aatgatgata
     4921 ttgataatcc attgccacca atgttctaaa ggaagataag aaaagagtgc gaagaaagga
     4981 acgacaaaaa tcaacgtcga atgctgatac ctgtcagtgc ttcatcaagg tgattctttt
     5041 tcaaatctgt cacgctcctt tttgaatcgt tcattgacta gatattctat ttaactatat
     5101 catagcacga cgacataacg attcatattg atttccatgc gctaaacgaa gacaaaaatg
     5161 aaaaaagtca atgtgctttt ggttgaatgt gactgatttt tgtaattatt cacgcgtatg
     5221 tgacttattt tgaaagattg tgaatgaaaa tgattgatta atgaaaacgg atacactata
     5281 atgtaactga attggggtga taaagttgtt aacggaaaaa agacatgaac tcatacttac
     5341 tgcattagac caacatcaat tcctatcatt acaacattta atggaattta cgggctccag
     5401 tgcttccaca attcgacgtg acttatcgaa actccaagac gacggcaagt tgacacgtgt
     5461 gcacgggggc gcaaagttaa ttagtgaaca aaaggaacct gaacttcatg agaaacgcac
     5521 tcagcatatt gatgaaaagg tggaaattgc gaaaagagcg gcacaactgg tgaatgatgg
     5581 tgattgtgta tatttggatg ccggttctac aactttagaa atgattcctt ttttaacggc
     5641 gaaagacatt acggtgatta caaacgggtt accacatgtt gaagcgttat tgaaaaaggg
     5701 aattgcaact aaaattatcg gtggcgatgt gaaggcgaac actttggcgg tagtcggtag
     5761 tcgtgcagtc tcgttcttac aacattatcg ctttaacaaa gtatttctag gtgtgaatgg
     5821 tatcgactgt gaagccgggc tcacgacacc ggatgagcga gaggcgattg tgaaagagac
     5881 agcgatgcaa cacgcacaac aagtgtatat acttgcggat acgtcaaagt tcaatcagca
     5941 atatttagcc gcgattcacg cgacagagca accgatttta attacttcag aaaaagcacg
     6001 tcatatgcgt cattttgata tttatgacaa tcattttgaa atattaggag gcaaatgatg
     6061 atttatacag tgacattcaa tccatctatt gattatgtca tgtttgtaga tgattttgct
     6121 gcgggtgcgt tgaatcgtac gacggccatt gcgaaatttg cgggggggaa agggatcaac
     6181 gtttctcgcg tcttacaaac attacaagtt ccttcaacag ctttaggatt tatcggtggc
     6241 tttccaggtc aatttatcga aaacacttta aaagaagaag gaattcatac ggcatttaca
     6301 caagttgatg aagatacacg tattaatgtg aagttgaaga gtcaaactga gacagagatt
     6361 aacgcggctg gaccgcacat taccgaaacc caagtagcga ctttattcga acaacttcat
     6421 gtgacaacgg ctgaggatat cgttgttgtc gccggaagtg tgcctgcaag tctgccggac
     6481 accatttata tcgatattgc aaagatcgca caacaaacag gcgcaaaact tgtcgttgat
     6541 gctgagaaat ctttaatcga agggatttta ccgtattatc ctttatttat taaaccaaat
     6601 cagcacgaac ttgaagcaat gtttaacacg aagatagaga cagaccaaga cgtgttaacg
     6661 tatgcccgcc gtttagttga taaaggggca caatccgtca tcgtatcact cggtggtgct
     6721 ggtgcaattt atgcggatcg agaagtggca tacaaaattc aagcaccaca aggtcaagtt
     6781 gtcaatacag tcggtgctgg tgatagtaca gtagccggaa tggtggcagg aatttctcaa
     6841 aacctcgcgt tacctgaggc actcaaatta gccgttgcat caggttctgc gacagccttt
     6901 aacgatgatt tagcacaata tgacatgatt caagaactcc aagcacatgt gacgattcaa
     6961 ccacttaatg aggaggggta acatgagaat tactgagtta ctcacaaaag aaacaatcgc
     7021 aatggatctt tcagcgacta cgaaagatgg tgtcattgac caactcgcac aacaattaaa
     7081 tcaagcagga aaattaaatc aattagatga ctatatcgca gcgatccaca aacgagaaca
     7141 acaaagttca acaggtattg gtgaggggat tgcgattcca catgcgaaag tagaagcggt
     7201 caaaacacca gcgatcgcat tcggtaagtc taaagcaggt gttgactatg acagcttaga
     7261 catgcagccg gcacatttat tctttatgat tgcagcaccg gcaactgggg cacaaacgca
     7321 tttagatgct ttagccaaat tatcgagtgt tttaatggat gaaaatgtac gtcaagcttt
     7381 attagaagca gattcaactg aagctgtgct cgcaattatt aataaagcag acgatgaagc
     7441 gacagatgat gacactgaag cagccgctga acctgcacct gtagatcata atgaacctta
     7501 tattcttgcg gtgacagctt gcacaacagg tattgcacat acgtatatgg cacgggatgc
     7561 tttgaaaaaa caagctgaag aaatgggtat taacattaaa gtcgaaacaa acggagctag
     7621 tggtattaaa aatagattaa cgcaagaaga tatcgaacgt gcgacaggtg tgattgttgc
     7681 ggcggacgtt cacgttgaaa ccaatcgttt taatggtaaa aacgtggttc aagttcctgt
     7741 agctgatggg atcaaacgcc cagaatcatt aattaacaca gcattagata caacgcgtag
     7801 accattcgta gctgacaatc gtcaaaacac aaatgacgaa gatgaaaaac taagtgtcgg
     7861 taaagcgatt tacaaacact tgatgaacgg tgtatcaaat atgttgccgc ttgttattgc
     7921 gggtggtatt ttaatggcga ttgtatttat gattgggcca aatgcgatgg atccgaaaag
     7981 ttctgaatac aatgcatttg ctgaaacgtt atggaacatc gggaataaga gtgcatttgc
     8041 gttaattatt cctattttag cgggttacat tgcacgtagt attgctgaca aaccaggttt
     8101 tgctgccggt cttgtaggcg gtatgcttgc agtctctggt gactcgggat ttttaggtgg
     8161 gattattgct ggtttcttag caggttattt aacacaaggg attaagaaag caacgcaaaa
     8221 cttcccgcaa atgttagaag ggcttaaacc aacattgatt tacccgatcg tttctgttac
     8281 tgtcacaggc ttattgatga tttacgtatt caatacacct gctgcatggt taaataatgc
     8341 tttaatttca ggattgaata acttatcagg tagcaatgtg gtcattctcg gtatcgtact
     8401 cggtgcaatg atggcgattg acatgggtgg tccgttcaat aaagcagctt acgttttcag
     8461 taatgcagcg ttaacagcag gtaatgtagc gccaattaca gcagcaatgg ttggtggtat
     8521 ggtacctcca attgcacttg cgatagcgat gatgattttc cgttctaagt ttactaaaga
     8581 acaacgcggt tcaatcattc ctaactttgt gatgggcgca agctttataa ctgaaggggc
     8641 tattccattc gcggcagcag acccattacg tgtcattccg tcaatgatga ttggttctgg
     8701 tgttgctggt ggacttgcgt tactattcgg ttccaatatt aacgcgccac acggtggttt
     8761 agtcgtgatt attggtacag atccaagtca cgcattactc acactgcttg ccatcttaat
     8821 tggtgcggtt gtcggtgcag tgatttacgg tatgattaaa caatcaccca ataaagcgta
     8881 gacatttttg aagagacaca ggcatgcttt taaatcatgc gtgtgtcttt tttaatgttt
     8941 gggaaaagtt tgagaattaa gatgttagaa atagtctatc cactttaaaa tgcgtgcgat
     9001 gtgctatgta gtctcacgtg ttaaaatgtg gtgtgtacaa taaaagaagt caatcaaagt
     9061 gaaataacgg taaatcgtaa tctgaacaaa atgggtctca agtctcacac gttcatagta
     9121 taatttcact caaagatatg atatgataaa attaatattt ttgtgtctgg aggttgctca
     9181 atgggaagga tttaggaaat gtgaatatga cttgtcgcta tagccaaatc aatacaacgt
     9241 tgctttctat tgggcgatgt caattaacgg aggtgaatcc ctatctaata gggaactaat
     9301 tggatagtac gaccatatta tacttattta tattttttgc attaattgct ttaactacag
     9361 tctttgtagg ttctgaattt gcattagtaa aggtgagagc ttcacgtgtg gaacaactca
     9421 ttgctgaggg aaatgggaat gcacgtgtcg tgaaaaaaat gatttcaaat ttagattatt
     9481 atttatcagc ctgtcaatta ggaattacag tgacttcact tggtttaggt tggttaggtg
     9541 aacctttatt tgaaaggatt ttacacccgg tcatcgaact gctgaatatc ccggatgcgc
     9601 tagtgatgac ggtatctatc gtcgtggcgt ttactgtcgt gacatacatt catgtcgtga
     9661 taggtgagtt ggcgccgaaa agtttagcga ttcaatatac agaccgtatc gcattacttt
     9721 atgcaagacc gctgtactat ttcggattga ttatgaagcc gctcatctgg ttaatgaatg
     9781 gttctgcgcg ctttattatt cgaatttttg gtgcagatcc aaatgcaggt aatgaagcga
     9841 tgtcagaaga agagctcaaa atcattatga ataacagcta tcatggtggt gaaatcaacc
     9901 aaactgagct cgcatatatg caaaatattt tttcgtttga cgaacgccac gcgaaagata
     9961 ttatggtgcc gcgtacgcaa atgattacac tgaacgaacc ttttaatgtt gatgagttgc
    10021 tagagacgat taaagaacat caatttacac gttatcctat tacggaagac ggcgataaag
    10081 accacattaa aggttttata aacgtaaaag aatttttaac ggaatacgca tcaggtgtac
    10141 cgattaaaat cagtaactat attcacgaat tgccaatgat ttcagaaacg acacgtatta
    10201 gtgatgcgct tgtacgtatg caacgcgaac atgtacacat cagtttaatt attgatgaat
    10261 acggtggcac agctgggatt ttaacgatgg aagatatttt agaggaaatc gtcggtgaaa
    10321 ttcgagatga gtttgacgat gatgaagtga acgatatcgt gaagttagat gagcaaacat
    10381 accaaattaa tggacgtgta ttgcttagcg atttagaaga aatgttcggt attgtctttg
    10441 aagattcaga agacattgat acgattggcg gttggcttca agcgcaaaac accgatcttg
    10501 aacaagatga ttttgtcgat acggcacatg atcgttgggt gatttctgaa attgaaaacc
    10561 atcaaattat ccatgtgcta ttgcgttatg aatacaatga ctcacgcata aaaaatgaag
    10621 atgacgagga tgattattta aaagatgaat cctaaatgag gatgggacat aaaaactttt
    10681 aatgcgattg atgcaatatt ttgttaaact tgccctccct acgattttcg gtttttgatt
    10741 gccttcatga cttcgcgttc ctaggggctg gcccttcaac tcaattcggc ttgattgaag
    10801 tgtacactag atggatgccg aattggattt tgagagcggt acaggaatct catgtgtaac
    10861 aaagatttcg tcgtactgcc cccgcaaggc tgactagact tctcaaaagc atgtgcattg
    10921 agaagtcaga tagctactgc gttaaacggt agcccctttt aaagttaaat gacgttgttt
    10981 agcctttaac ttatccctta ggagtctcag tcttctgggc aatcttgcat caaatacagt
    11041 caattagggc aagtttatga aaaaagataa tctaaagcat tcaattttta cgtctaactt
    11101 atcctcattt tgcgacgctg ttatcatcag taatggatat aagttcacca ataggatagg
    11161 aaatgggaaa actcaatgtc cgtctcattt cttaaagtgt aaaagaaagt tagagatgca
    11221 ttggaatacc attctagcta caattaaatg agtcatcgca agtgtgtcag agcaatcgga
    11281 gacatgtgca caagtaactg aacagcattg tatgaaattg tttctatgta gagcggacat
    11341 acgaaatcta atttgaacgt tagacttcta tgccgctttt ttattttgaa agcaaaagtt
    11401 atgtttttcc tgcaaagggg tagaaacaaa ggatagtaga tagaaaaaag ctaatggagt
    11461 aggtgcacaa aatgaaatta cgtgtgattg tcccgtgttt taatgaaacg gacgtcttac
    11521 atcaaacgat tcaagaatta acagaaattc tagaaaaaga tagcctcgac caatcttatg
    11581 attacgacat gttgtttgtt gatgatggga gtcaagatga tacaatgacg cttctccaac
    11641 aggcagccgc acagtcaccc catgtgaaat ttatttcatt tagtcgaaat tttgggaaag
    11701 aggctgcgat gattgcgggt tttgaacata gtacggattg cgatgcggtc gtgatgattg
    11761 acgccgattt acaacatccg cctgagttaa tacctgaaat ggtccaagcg tatcgtgaag
    11821 gttatgatca aattattgcc aaacgtaatc gcgctggtga gcatgcatcg cgcaaatggg
    11881 taacccgttt atattacaaa atgattaatt atttcattga ggatatagag ttagaagatg
    11941 gtgtcggtga ttttagaatg ttaagtcagc gtgccgtctg ttcgcttgtc agcttgaaag
    12001 agtacaaccg tttctcaaaa ggactctttt catggatcgg ttataacagt aaggtcattc
    12061 attatgaaaa tgtcgagcgt gaagcgggtg agtcgaaatg gtcatttaga agcttgctca
    12121 attatgcgat agacggttta atttctttta attataagcc acttcgcaca atgatttatt
    12181 taggcttact catttttggc gtcagtatga tttatattat ttatctcttt attgatacac
    12241 tcattcacgg tgttgatgtc cctggttact ttacgatgat tgcggcggtg ttatttatcg
    12301 gtggcatcca actcgtttca attggtgtga ttggtgaata tataggacgt atttattatg
    12361 aagtaaaaca acggccgaag tatattgtag aagcatcgaa tgtaggcatg ccaaaaagtc
    12421 ataatgaaac gaaacaagac gtgtcgattt aaggagaacg tggtgaatgt aacaacgctt
    12481 tttatttaat gatgtcgtct atttgacttc tatgtgcaat aaaagcgata caaaaaaggt
    12541 gtagatgatt gaagtctttg aaagaagatt tcatcatcta cacctttata ttgtatttat
    12601 cacagtatgt ttagacggat gagtctattt tttaccacgc attttgccta aaattaatga
    12661 agctaatgcg attaaaataa ttgatccgat taatgctggt aaaatgtata cgccaccgaa
    12721 ttctggaccc caatgaccta acaaccagct accaatcgca gaaccaacta aacctgcgat
    12781 aatatttccg ataataccac ctggaatatc tttacctaaa attgcaccag cagcccaacc
    12841 aatgagaccg ccgacaatta acatcactat aaaacccata gtaaatgcct cctttatttt
    12901 ctaaactata ttaaggctca attaatacat accacgttca acttgttttt aatcatcttt
    12961 ttctaaaata aatatttgtt ctaacaaaaa gatgaggatg aggcacgcgt aaatgatgag
    13021 atataagtac caaaaaggcg tcaatagcat catcagtatc atggacgcaa caataaagca
    13081 ggcacctatg aataatgggt tttccatttt caaacggcga taaaaagttt caaaccgtgg
    13141 tgaatgtaac acgctagaaa attgtaagat ggcaccgaat aaaaagatag caggtgctaa
    13201 gtatggcaca gacatataaa ttgtttgatc tgccgtttgt gtcatcacaa cgaataatat
    13261 gctaataatc atagcagtaa taccagcgaa aaatttttgg ttgtgaattt taaaagtacg
    13321 cacatggcga tctaaataaa tttgtaagat gaaccaaatg aaatacatta aaaagctact
    13381 catcgtaata aaattcagct ggtttaataa aataggattt agtaaactat tcactgttat
    13441 cgcaaataag aaagcactta aacgcacata ttggtattga tgtcgataca tatcaataag
    13501 aaatacgcca acgacgataa tgatatttaa gatgacaaat aaggccatgg tgttctccta
    13561 acttttcgca attcattata ctattatatc aatatcactg tgtataagca tttaataaca
    13621 cttttaacga aataacattt tgaggcgacc gcgtatcaat gattgaattc gtgactttct
    13681 taatacgagt gacaactaaa cgcctttttg attactccaa attaatgtgt gcaattgtgg
    13741 taagacgaac acttcattca tctccgcatc cgctgttaca cggtcgatta actgttcgta
    13801 acgatcgagt aatttggctg tatgttgttc gacatgctcc tctaaataag ggttgcccac
    13861 ttgtaagtag aacggaatat ctggataacg ttggtgaatc atttttgcaa agtcataatc
    13921 tgcatcatca aatacgacca cttttaaatt gatccgtgag atgtctaatt gttcaatgac
    13981 ttcatctaaa cgtggtaaat tttgttgcat accggaactt ggtggcttag gtgaaagggt
    14041 taagtcattg atttgacgca tccaaggctt gaactgtgat ccttgtgttt caagtgctgt
    14101 acggatgtca ttggcttcac ataaatctac aaatgactgc agtcctttaa ttaaagcagg
    14161 attcccgcca gaaattgtga cgtgattaaa tcgattgcca ccgatatttc tcagttgcgc
    14221 taaaatctct tctgcttcca tcatttcaat gtcatctttc atactgccat cccaagtgaa
    14281 ctttgaatcg caccaactac agcgaaaatc acaaccagct gtacggacga acatcgtttt
    14341 acgaccaatt acacggcctt caccttgaat ggtaggaccg aaaatctcga gtacaggtat
    14401 tttagccatg acgttgctcc ttctttttag gacgataaat gacgtaactt gtaggtgttt
    14461 cacgtaaaaa aacttgtaaa catttcggtg cgtttggcaa ttctgctaac cgtgcgctca
    14521 caatgtcata aatcgtttgt gccacaattt cagtggaagg acttttccct tgaaatggca
    14581 cgagatcgtt cagtaaatag tggtcgaatt gatcatgaat taaacttttc aattcactaa
    14641 aattaattaa aaagcccatg ctgtctaact catctccacc aattgttaaa ttgacaaagt
    14701 acgtatgacc gtgcacacgt gtacattttc ctgcacgttc gtcaggaatg aaatgtgccg
    14761 ctgaaaagtt aaagtcttta ttcagttcaa acatataatc atggtcgacc tgtggataca
    14821 tttgttgcat cattatactt cacgtcctct ctctgcaaga tattggttaa gcccgcgctg
    14881 acgtaattga catgccggac attcgccaca accttctgcg ataatgccgt tataacatgt
    14941 taatgtccga tcgcgcacgt aatcgagtac acctaagtcg tcacttaatg cccaagtttc
    15001 ttttttgtta agccacatga gcggtgtatg tattacaaaa tcacggtcca tcgctaagtt
    15061 caatgtgaca ttcatcgatt tgataaagct gtcgcggcaa tcaggatacc cagaaaagtc
    15121 tgtctcgcat acgcctgtaa tgagatgttt ggcaccgatt tggtacgcta atgcaccagc
    15181 aaatgagagg aagagtaagt ttcgagcagg gacgaacgta ttcgggacgt cattatggct
    15241 gtctatcgtc atatcgtgtg atgtgagtgc attcggtgtg agttgggaaa gtaatgccat
    15301 atctaataca tgatgtttga gcccttgatc ttcagcgatt tcttttgcga cttcgatttc
    15361 tttcgcatga cgctgaccgt attcaaatgt aactagttcc acttctttaa aatgtttttt
    15421 agcataaaac agacaagtcg tactatcttg tccaccgcta aatacaacga gtgctttttc
    15481 gttattgagc acttctgaca tggttgatcg ctcctttaat agagaagctc ctaaaataag
    15541 acataaaaaa agccgtcact ataaaaaata gacggttaca agtgtctagt tttttataga
    15601 gggttgatag ctaggaacct ctgcaattca attctgttcc atactgtaat acatttagtg
    15661 tcataaatca agtggtgctc tgctcattat cacttcaatt ttgtcaatta ggtcgacatt
    15721 tgtgataata gaagtattaa agaaagaacg aggcaaaaac tatgatagtg atgatagata
    15781 ataaagattc ttttacgtat aatattgttg attatgtcga atatgagcgt caacaacctg
    15841 tcacggtaat cgatgtcgaa gccgtttcta ttgagaaatt aaaagagatg caaccgacag
    15901 cgctcattat ttctcctgga cctggtgcac cagaagatta tcctatccta tttgaagtcg
    15961 tgaaagcctt tgaacatacg acaccgattt taggtgtttg tttagggttt caattattag
    16021 taacgtatta cggcggaaaa attatacacg caccacgacc tgtccatggg catacaacgc
    16081 gcatcagtca cgaccaatca ccgttatttc aaggattacc tgagcagttt gaagtgatgc
    16141 gttatcattc gttaatggct gacccgatga cgattgtgaa accactcgta gtgtcagcgc
    16201 aaaacgaaca aggaatcgtg atggcggtgc gtcacatgtc acgaccgata gacggggtcc
    16261 aatatcatcc cgaatcgatt ttgtctgaat acggtcatga acaaatacga aactttttga
    16321 gaaaagcgga ggtcagctat ggttgtgaag tttaattata aatattataa cgatccaaat
    16381 acgaccacga cgtatcaata tcattttgat caaccgcttc atcaaggtgt tgcacgagaa
    16441 ctgaaaaaag tcggtcaaat tattgaagcg gcgacacaat atcaacagca agggtattac
    16501 gtcgcgcttt atttaccata cgaagcggca ccgtattttc atgaagattt tcaaacgtac
    16561 acaccggata atggcattta tgcagcgtat tatgcgtttg atgcgcctgt cgatgcgata
    16621 caagccacca cagctgaacg ttcgcaacgg cgtcaaggtg gacagtttca atttatggat
    16681 gataagcata ccattacaaa gcatatccgt acgatacatg acgaaattac agcagggtgg
    16741 acgtatcaag tgaattatac gacacgtctc aaaagttttg atcaaatgtc gatttctgca
    16801 ttgtatgacc agttgacgca acatacgaat ggtgattata cagtgctcat cgatacaaca
    16861 gaggtaaagc tcgcttctat ttcaccggag ctctttttcc aagtaggtga ctttggtaat
    16921 caaggtcgaa cagtcgtgag caaaccgatg aaagggacga tgccacgagg gacgacagtt
    16981 gaagaagatg aacgtcacgc ccaagcattg cggcagtccg aaaaagatcg tgcggaaaat
    17041 gtcatgattg tcgatttatt gcgtaacgat atagcacgtg tggccaaacg aggcagtgtc
    17101 aaagtgtatc acccttttgc gattgaacgt tatcaaacgg ttttccaaat gacgacgatg
    17161 gtcacgggtc agattacaga cacggcaacg tatgaaacgt tattgcatgc actttttccg
    17221 tgcggttcga ttacaggagc accaaaagtg aatacaatgc gtattattca tcgtcttgaa
    17281 acgacaccgc gtcatattta ttgtggggca atcggtttgc ttcatccgaa tgggcgcgcg
    17341 atttttaatg taccgatacg aacagtcgaa caaatcaatg acacgttgta ttacggtgtc
    17401 ggggccggaa ttacgataga ttctgatccg gagcaagaat atgcagaatt tcatgcgaaa
    17461 atgaaaatat tagagggatt gcaatgaatt tatttgaaac gatgcgattg gacaatggtg
    17521 aaataccgcg actagcttat catgcagaac gactacaacg tgcaagtacg gcgctcgggt
    17581 taccatttga cgacataaaa tggcaacaaa ccatccaaca gttatgcgaa acgtatgcgg
    17641 tgggacagta tcgggtaaaa gtcacgcttg aaccatcagg ggaattgcga acagaagtgg
    17701 ggacactcca aaaaaagacg acgatgactg cacagtttgt tcctatgaaa aacgatatcc
    17761 ctgaatggca acgggtatac aaaacgtctg aacgtgaaca tgtcgcgcat tcgcatacga
    17821 cacaactcgc tttgttttac gatgagacca cgaataaagt gcttgaattt gatattggga
    17881 atgtcgtgct tacagtaaac gatatacatt atacaccaat tttcgaccac gattttttac
    17941 aagggtgtat gcgccgcgat ttgttagctg aggcacgtat taaggaaaag tatttgacga
    18001 cagtgatggt gaaggaagcg ttgcaacacg gaggacaatt gtggatgatt aatagtttgc
    18061 gtgagtgggt gcccattacg ctggaatcca aaaagtaggt gattgtatga tcgggctcta
    18121 tattttaggt tttctcattg tcatgtggat cggtcaaatc gtgttgcaac ggtttgttgc
    18181 acgtcaacgt cgcttatggg tctacttatg gatgggaggt atccttatca ttcagtgcat
    18241 gcttatctat ggctttgtcg gtgaacttgc acagcatatg cgcgaaattt taagtttgtt
    18301 ttatgatgaa aaatagaggt gaaaaaatga aagtttatag tcaaggagat caggcgattg
    18361 tcgtatcttt acaaggagac gtgacaccag tcgctactga aaagttgcta ttgatacgtc
    18421 attgcttaat caatcaaaac tatccattta ttacggaaat tgtgccgact gaaacggata
    18481 tgttaatttc ttatgatgca cgcatgatga tgaaacattt gaatattgat tcgccatttt
    18541 tacatatgaa agcagtcatt gaaaatatta atatagagga tatgacctta gacaaggaaa
    18601 ttcgttgtgt gaaagtcccg attgtctatg gtggcacgaa tggaccgcat ttggatatga
    18661 ttttaaaaga gttgcatatg gatcgccaaa catttattga tatacataca ggtgcagact
    18721 atttcgtttc gatgatgggg tactcaccag gttttcctta tttatccggt gtcgacgcac
    18781 aaattattgt caatcatacc gcaactgaac cacgattgat tccagcaggg tcggtcattt
    18841 tagaaaacaa taaatgtggc attacaacga ccgaaacgta tagcgactgg cttgtaatcg
    18901 gtcatacgtc attgccatta ttcaacccta aaaaagagga ttttgcgttg atttcattag
    18961 gggaccacgt gaagtttttt gaagtacaag caggagggaa cgacgcatga caatcatcat
    19021 agaagacagc gggttatttt caagttttca agattttgga cgcgaaggct atgaacatat
    19081 gggggttatt cgtagtggtg ctttagatgt gttggcgcac gaaattgcga accgtttagt
    19141 cggcaatgac cgcaatgaag cgacactcga aatgagcaat caaatggcgc gtattcgttt
    19201 tacagaaccg actttaatcg cattgtctgg tgcacaaggt gtcgcacata cagatgacat
    19261 gcgtgtacaa atgaataaat tgtatttaat gaacaaagga gacgtgttag ccgtcgatca
    19321 tctacgccgt ggttcgcgtt tgtatttagc agttgcgggt ggttttgaac tcgaccaatg
    19381 gctcggttcg acgtcgacag atacgattgc aggcatgggc ggatttaaag gacgtcgttt
    19441 acaagcaggt gatacgattg aactaaaacg cgattataat gcgcgtcatc atcagttgtt
    19501 taaaaacttg gcacagcgta agacggtcga ttggggtgtg gatggttatg ccttgtcttt
    19561 caactattta tcagacgtcg tacatgtcat tccgaataaa gggacagaag attttgaagc
    19621 ggaagtgctc cgtcaattcg caaatggtga gtatgaagtg acgagtaaag cgaatcgtat
    19681 gggtgttgtc ttagaaggca tgccaattaa agcgcattat gatgatatgc caccgcacca
    19741 atctgtgaaa cgtgggacaa ttcaagtgaa aaaagaaggt gccccagtca ttttattaaa
    19801 tgaccattat acattaggca gttacccaca aattggtacg attgcgtctt atcatttgtc
    19861 taaaattgcg caaaaacgtc aaggttcgaa aattaagttt caatttattg acgtgttgca
    19921 agcagaacaa aacttagtga aatatcacaa atggcgtaaa caattgttcc aaggtatcga
    19981 atttagaatg caaaaagaaa tgttgaagta actcaatttg acaggaaacc aagaaatact
    20041 acttgagtcc gaatacaatt tcagcgcatt acattacagt ataataaaat acattcgact
    20101 tgctgtgcac agcgcttgat gaagataata tgaagcactg ataaagttaa tatgaagttg
    20161 caatgaatgt gatccataca aacagttttg acttgaaatt ttatgtcaac tcctatatat
    20221 tgatatattg aaattactgt tgaatattac aaattgatta caaataacac aaaagtaaag
    20281 tagaactttt acaaacttag tataaacgat aaataatcaa ctttgaggat tagaatta
//
LOCUS       DANHPA010000043        19916 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.043, whole genome shotgun sequence.
ACCESSION   DANHPA010000043 DANHPA010000000
VERSION     DANHPA010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 19916)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19916)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19916
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.043"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..587
                     /locus_tag="PTC28_001226"
     CDS             <1..587
                     /locus_tag="PTC28_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016425508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HDK5716519.1"
                     /translation="GSILMYVGYIYFHKVRGLLFFWIGALMILFTLLSNKYTLVILFL
                     FMIIVAVRYVIYKRRPLEILSTEDAAQNPSFIKQKWFGEQKTPVYVYKWEDLQIQHGI
                     GDVVVDMTKAANLKMQNHVVIRHIVGKVQVVVPLNYNVNLNVAAFYGNVTLDQQRFKV
                     ENNNILMQSQHKPENYTVNIFVSTFIGDVEVVYR"
     gene            584..1627
                     /locus_tag="PTC28_001227"
     CDS             584..1627
                     /locus_tag="PTC28_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDK5716520.1"
                     /translation="MNHYVRAIGSMLILVYSMLTAFFFIDKVFTNIIFFQGMFYTQIL
                     GIPVFIFLNLVVIFLCIIVGSVLAYKINQQNDWLKQQIVRAFEGETVGINDQQLELYN
                     ETIELYQALVPLNQELHKMRIKTQNLTNETYNLNDLKVKKIIEDERQRLARELHDSVS
                     QQLFAASMMLSAIKETDLAPPLDQQIPTLEKMVQDSQLEMRALLLHLRPIGLKDKSLG
                     EGIKSLVTDLQRKVPIKVVQEIDEFEVPKGIEDHLFRITQEAISNTLRHAEGTQVTVE
                     LLNRNDYLLLRIQDDGIGFNVDEKLEQSYGLKNMRERAIEIGATFHIVSLPDAGTRIE
                     VKAPLEKEEQHDN"
     gene            1617..2246
                     /locus_tag="PTC28_001228"
     CDS             1617..2246
                     /locus_tag="PTC28_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDK5716521.1"
                     /translation="MTIKVLFVDDHEMVRIGISSYLSTQPDIEVVGEGASGKEAIAKA
                     HELKPDLILMDLVMTDMDGVEATMQIKKDLPHIKVVMLTSYIEDKEVYRALDAGVDSY
                     ILKTTSANDIAEAVRKTSRGESVFEAEVLVKMRNRMKQRAELYELLTEREMEILLLIS
                     KGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHGLIE"
     gene            complement(2813..3394)
                     /locus_tag="PTC28_001229"
     CDS             complement(2813..3394)
                     /locus_tag="PTC28_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HDK5716522.1"
                     /translation="MTLLEHILEYNEEFVANKAYEAYSTSKTPSKKAVLLTCMDTRLQ
                     DLSTKALGFNNGDLKVVKNAGATISHPFGSTMRSLLVGIYALGAEEIIIMGHKDCGMG
                     NINVEEVMTTMQQRGVDEQVIDILNYSGIDVSNFLKGFDDVYDNVKHNIEMIYEHPLF
                     DNKVPVHGLVIDPHTGELDLVHNGYERAESYQN"
     gene            complement(3427..4764)
                     /locus_tag="PTC28_001230"
     CDS             complement(3427..4764)
                     /locus_tag="PTC28_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HDK5716523.1"
                     /translation="MSKNEQQSEGFIDKVKKTISNDDHAQNQKEETPSPDRKGDATGE
                     TEEKHKFVKPQPFQSKEAPKENQTFFVSRINKPAKYTDRPNFFNYLIYRIGKDDASGL
                     AAQLAYYFMLSLFPMLIFILSLVPLFNIDSDTITAQISKNAPAETSSIITGIIDDVMG
                     NASGGLLSIGLILALWTASNGMTAMMNAFNVAYDVEDSRNFVVSKLLAIFFTLLIGIT
                     LPLTLVLFTFGEQIGNLLFGPLGLDEQVRWVFSLLRTALPVLAVLIVFTIIYTLAPNV
                     KIRFKSVIPGALFSTIVWILGSLAFGFYVSNFANYSKTYGSIGGVIVLMLWLYITGFI
                     LIIGAEINAIVHQRKVIKGKTPEEETYDELEAEDEEDLAEAHNNYGEKDDKQVNDDQE
                     TNDTRHKESVQNTASESTHDTTTSTDRAPQYKEPEIVERTNTGRSKHIKTTED"
     gene            complement(4980..5267)
                     /locus_tag="PTC28_001231"
     CDS             complement(4980..5267)
                     /locus_tag="PTC28_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HDK5716524.1"
                     /translation="MQNKLLPGILIGATVGGAIALIDKNTRRSVKTSVNNIKTGQRSS
                     QPSKFTQVKDEVLYWKNTFDEIRRNNPELERSLRNAKDTFMERKNNKQIGL"
     gene            complement(5275..5733)
                     /locus_tag="PTC28_001232"
     CDS             complement(5275..5733)
                     /locus_tag="PTC28_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HDK5716525.1"
                     /translation="MTTVAFVCLGNICRSPMAEAIMRQRLKDRNIDDIEVYSRGTGRW
                     NLGEPPHQGTQKILKAHDIPFDGMISELFTETDDFDYIIAMDQSNVDNIKDINPHLKG
                     KVHKLLEFSDMEETDVPDPYYTNNFEGVYEMIQSSTDHLIDYILKDTRKG"
     gene            5867..6070
                     /locus_tag="PTC28_001233"
     CDS             5867..6070
                     /locus_tag="PTC28_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002482850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1128 domain-containing protein"
                     /protein_id="HDK5716526.1"
                     /translation="MSKSIEEMIVEIRNRLNLVNPGLIDPENYSENDREDIEDIHAFV
                     TSKRDFTPREMTGITEALGDIRK"
     gene            6092..7324
                     /locus_tag="PTC28_001234"
     CDS             6092..7324
                     /locus_tag="PTC28_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HDK5716527.1"
                     /translation="MTTEKRLQQYAKLLVRVGMNVQQGQPVYIRTSVETVDFTRLIVK
                     EAYAAGASDVRVKYEDPQVKRLTYENEPTSFFEQEVKGYDVEERMDYVNRGACMLALL
                     SEDPDLLNGIDSDKLKAAQRQYAKAFKPYMIAAQKNSFPWLVACYPSQAWANRVYPEL
                     SDEEAMARFLEDILSIVRVDGNDPIENWERHAQNLKVRAAMLNDKAYTALHFVSEGTD
                     LHIGLPKGHIWEEPMSYTEQGQGFIANIPTEEVFTAPDCNNVNGYVTNKLPLSYNGTI
                     IDGFKLTFKDGAVVDFEAKQGEAVLADLLDTDEGARRLGEVALVPDDSPISNKNTIFF
                     NTLFDENASCHIALGAAYAFNLQGGTEMTAEELKAHGLNDSLTHVDFMIGSSDLNIYG
                     VLEDGTKEQIFKDGNWSN"
     gene            7343..7864
                     /locus_tag="PTC28_001235"
     CDS             7343..7864
                     /locus_tag="PTC28_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDK5716528.1"
                     /translation="MAKIDKKAMQDSKVYKSRQVFPQDTNHLGTLFGGTMMANIDEIA
                     AICAMKHANQTVVTASTDSVDFLKPIRNGDILTYIAMVSYSGSSSMEVCVQILIEDIP
                     NNKQELAALSFLTFVALDDDGKPTKVPAVYPETEAEKWFHETAEARVARRKARRQESK
                     QTLQFISELEFKQ"
     gene            complement(7929..9068)
                     /gene="yfkAB"
                     /locus_tag="PTC28_001236"
     CDS             complement(7929..9068)
                     /gene="yfkAB"
                     /locus_tag="PTC28_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM/CxCxxxxC motif protein YfkAB"
                     /protein_id="HDK5716529.1"
                     /translation="MLTTQKEPISIFNDPWEPYTDIEQYGQLTLSNVEFTTTNLCNMR
                     CSHCAVGYTLQTKDPDILPMSLILQRLDEIPTLRTISITGGEPMFSKKSIREVVKPLL
                     KYAYQRGIYVQLNSNLTLPLDRYLDIAEYIDVLHISHNWGTIDTFTEVGFGAMEKQPP
                     LKAKLKLYEQMISNARTLSEQGMFVSAETMLNKSTYPHLTSIHREVVNDMKCQRHEIH
                     PMYPADFASQLEVLDLKTMKEAISHLLDVRDSNTWMLFGTLPIFPCLQDEADAKLRQK
                     LKQAPNVTMRNDPDGRSRLNVNVFTGDVIVTDFGDETGTISNIRHDQLTDVFQRWLDS
                     PLAQAINCHCPKFECLGPNILVKNMYYPNVDFKVQEARMHTLFNQ"
     gene            9184..9345
                     /locus_tag="PTC28_001237"
     CDS             9184..9345
                     /locus_tag="PTC28_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716530.1"
                     /translation="MEEPQTMNQVKERLSQFLEEIEHADPNKVDVADIDEWLQLLDQL
                     EAKVNQLRQ"
     gene            9421..9936
                     /locus_tag="PTC28_001238"
     CDS             9421..9936
                     /locus_tag="PTC28_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HDK5716531.1"
                     /translation="MMAKVAVLLADEFEDVEFTSPKEALEEAGHETVVIGTTANAEVV
                     GKHGTKVTVDLSIADAKPEDYDGLLLPGGFSPDILRGDAEQRFGTFAKYFLKEDLPSF
                     AICHGPQILIDTDELKGRTLTAVLNVRKDLSNAGANVVDESVVVDKKLVTSRTPDDLD
                     DFNREIVNQFK"
     gene            complement(10512..12257)
                     /locus_tag="PTC28_001239"
     CDS             complement(10512..12257)
                     /locus_tag="PTC28_001239"
                     /EC_number="1.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate oxidase"
                     /protein_id="HDK5716532.1"
                     /translation="MGKVKANMALVSALKAWDIDHVYGIPGDSIDAVVDGLKVAENDI
                     DFIHVRHEEVASLAAAAYTKLTGKIAVSLAIGGPGAIHLLNGMYDAKMDNVPQLVLSG
                     QADSHKLGTKAFQEVDLPKLFEDVAVYNYQLKESDATRIFEIVDEAIRTAYREKGVAV
                     LTLPNNILNTKVEDNFPTEVEPYVPERRQPLSHEIQRAAQLFNESKRPVILVGKGTDH
                     AKAEVREFIEKGKIPTIVTLPSKTIVGDDHPYNLGNLGKIGSKPSYQAMQNADLLILA
                     GTNYPYVDYLPKKNIPAIQIDENPEAIGHRFDVDAPIVGDSQLALRALTDAIQPVEKR
                     SFLNEMLDHRETWKGWMTEDKNNDASPIRPERLIDAINKVMTDDTVIAADVGTSTVWS
                     TRYLNLGVNNHFIISSWLGTMGCALPTAIASRIAFPGRQVIGITGDGAFEMVMQDFST
                     AVQYNLPMVLFVLNNSELSFIKYEQQEAGELEYGIDFSDIDFAKFAEACGGVGYTLKD
                     PKDIDSIVQTAVQQHKPTIVNVYVDKNAAPLPGKIVPEQAINYAKWAYRSLTEDRKFI
                     FNEMPSLTTAVRRFL"
     gene            12458..13255
                     /gene="sgtB"
                     /locus_tag="PTC28_001240"
     CDS             12458..13255
                     /gene="sgtB"
                     /locus_tag="PTC28_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional peptidoglycan glycosyltransferase
                     SgtB"
                     /protein_id="HDK5716533.1"
                     /translation="MKRRGRIAKPAPHNEPHHNTYYQPVGQPPKKQKPRRIFRTLLML
                     IVLAGALFIGAMYFMAQRADIDELKSIEQKSSYVSASQMPDYTKGAFIAVEDRRFYKH
                     SGVDYRGSLRAIFASVRDRDRLQGGSTITQQLAKNYYYDNQQTVTRKLKEMFVAKRIE
                     RYYDKDEILSYYMNNIYYGDNHYTIESAANDYFGVTTNEQNYTLPHITVLQSAILASK
                     VNAPSVYNVNDMSPSFINRTKMTLEKMKQQEFINEQQYTEALQQLGA"
     gene            13440..14243
                     /gene="recX"
                     /locus_tag="PTC28_001241"
     CDS             13440..14243
                     /gene="recX"
                     /locus_tag="PTC28_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002477604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HDK5716534.1"
                     /translation="MSKITKIEVQKNNHERFNIYIDNEFAIGISIDTLVAFNIKKGDE
                     LDIDELKSLAQREYQQQANNHAIQYLSYRKRTRKEIAIQLRKEGYEEDIIHEAIAYCE
                     RLKLIDHRDYMISLKNTMLRTTDKGPEVFRQKLHQAGIEADLIEEGVRVYEEEQPFES
                     IVDIGQKIMNQKKGPPSKVKVKVQQSLQQKGFTLDTIFKVMDALDFKQDPETVDNLLQ
                     RDLEKVYNKYQKKYEGKPLYMKTVEALLRKGYPYDDIQRKLTESGIDHD"
     gene            14236..14550
                     /locus_tag="PTC28_001242"
     CDS             14236..14550
                     /locus_tag="PTC28_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002509976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhH family protein"
                     /protein_id="HDK5716535.1"
                     /translation="MIEKRLSDMDRQEILHVIQTSKEKMRKAEMNGIMNEYDVYANKV
                     VIAESYLIDTNEIELGKIYRLKDGTGNYFKVERLKGVFAWGYRINGAEAEEGLPISLL
                     QI"
     gene            14566..16095
                     /locus_tag="PTC28_001243"
     CDS             14566..16095
                     /locus_tag="PTC28_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002501580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5716536.1"
                     /translation="MGSSIVLKMINVTHYYRNQKKQNVLKPFSYQPEDIELNNISLHI
                     YEGEALGIIGEAESSKSLIGEILAGTVEPDKGRIARAASMFYANMNQKSVENILVMDY
                     VKDVIQLFPYDAPEHKATQVIKYAHLEAVQDERVKDLTDAQYAQLLFSLARASEAKIV
                     ILSHILSDLDEGFFEKAKVMVEDYIDREWTWIAIDNDVEKVKAVSNYLAWISHGQVRK
                     EGSIKQVLPYFLSHQRDMASLTTAEEREHFDEDWKRNRSRMPELTYNFRRIERYRHAQ
                     PPAFLSRIWTWLALFFLGMCMAGVLIFTNLGKIASAPLVTQATISKSTSDPYVDKLAY
                     GIVNDSEMTITPLDNKGKEEQLPHYTVASITGENKTTYRIEVDGKSYKANKDKFLYLN
                     PAALYKEVDRKQLEPYMKDNYINFVDYFNSVLHKSHKKVNETLVPEHEQRFVEPIVEQ
                     PISMLFDDRDHLLGFTFPIVKQDKFKDEFNIKTDIWMSKTDSGYFIADLKHSKWIYIE
                     L"
     gene            16105..16902
                     /locus_tag="PTC28_001244"
     CDS             16105..16902
                     /locus_tag="PTC28_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acid translocation permease"
                     /protein_id="HDK5716537.1"
                     /translation="MLENLIHFFHNRTRLFRHSKYRLQKHRKWTALTFLIAFGLMVLT
                     AIAFYFLDIVEVTQATFDYRLTGLVAFGVIWVAIYIHYRFFPRDYYVTRHFNMSPFFH
                     IVLSSGMHTIILTVLMTVMAWLKPLNTDTTWVGVFFYSAMSFVFIVIMSFLLGLVYVL
                     YPKLDRVFTLIVILTFLLVPILYIPPNSNGWVTHVMMLNPMYYLVNGMQQAVIVGHEA
                     MNHLGYHFYFMCFIGLMIVFCYALKDYVSQLRPNEHHQSKVQKEKAE"
     gene            complement(17373..18350)
                     /locus_tag="PTC28_001245"
     CDS             complement(17373..18350)
                     /locus_tag="PTC28_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDK5716538.1"
                     /translation="MDTATHIAIGVGLTAIATTDAAMSGNFAATATVLIAGSLIPDSD
                     TVLKLKDNATYISNHRGITHSIPFTLLWPLLLTLLVYSLFKHVDPLHVWLWAQLAVFL
                     HVFVDIFNSYGTQALRPFSNKWIQLSVINTFDPIIFAILLVGIAIWAIGVHPYVVFIP
                     VLIVLIVYYILRFQMRSWLKKQALNQVEHLGTPIKVFVAPTLRFMQWRIAIQTEKHDY
                     VGRSYGRNIVFSDKVERQPFPSNAIMKYAQYDKNVKAFLNFSSIYRWHVRQVDSYTTE
                     LRFIDLRYLKDGHYQFVAILHLDQEMKVKHSYTGWVFSEEKLLRKLLTH"
     gene            18441..19487
                     /gene="mutY"
                     /locus_tag="PTC28_001246"
     CDS             18441..19487
                     /gene="mutY"
                     /locus_tag="PTC28_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HDK5716539.1"
                     /translation="MLDELTFKPHLLEWFEKEQRQMPWRETKNPYYIWISEVMLQQTQ
                     VDTVRDYYHRFVEAFPTIEDLANADEDDVLKLWEGLGYYSRARNFHTAAKEVVAFHDG
                     SVPQHPETFLNLKGVGPYTQAAVMSIAFDLPLATVDGNVFRVWSRLNDDTRDTALQST
                     RKAYENELAPYVAQQSGDFNQAMMELGALVCTPKAPLCLFCPVQMHCESYEQGTVLER
                     PVKTKKLKKKTLKFDVYVIQNQSGDFLIEQRTASLLKGMWQFPMIEHGAKEDIEPTLD
                     INHLTIQRKNVVKVKHQFTHLTWHLTVHTATVDETVAPVFANGRRWMASVEKDNYSFP
                     VPMTKIFNAINEAE"
     gene            19553..>19916
                     /locus_tag="PTC28_001247"
     CDS             19553..>19916
                     /locus_tag="PTC28_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF402 domain-containing protein"
                     /protein_id="HDK5716540.1"
                     /translation="MVKSCIPREGESIKIQSYKHDGNIHRVWSETTILKGTADVVIGG
                     NDHTLVTESDGRTWVTREPAIVYFHSEYWFNVICMFREDGVYYYCNLSSPFVCDEEAL
                     KYIDYDLDIKVYPNGKYHL"
BASE COUNT         6423 a         3486 c         3953 g         6054 t
ORIGIN      
        1 taggcagtat tttaatgtat gtcggttata tttactttca taaagtgcgt ggattactat
       61 tcttttggat tggcgcatta atgattttat ttacattatt atctaataaa tacacactcg
      121 tcatattatt cttgtttatg attatcgttg cggtgcgcta tgtaatctac aaaagacgac
      181 cactggaaat attatcaaca gaagatgcgg cgcaaaaccc ttcattcatc aaacaaaaat
      241 ggtttggcga acaaaaaaca ccagtctatg tttataaatg ggaagatttg caaattcaac
      301 atgggattgg tgacgtagtt gtggatatga cgaaagcggc gaatttaaaa atgcaaaacc
      361 atgtcgtcat tcgtcacatc gtaggtaaag tgcaagtcgt ggtacccctt aattataatg
      421 tgaatttgaa tgtggctgca ttttacggca atgtcacttt agatcaacag cgttttaaag
      481 ttgaaaataa taacatttta atgcaatcac aacataaacc agaaaactat accgtcaata
      541 tcttcgtctc aacatttata ggtgatgttg aggtggttta tcgatgaatc actacgtccg
      601 agcgataggt tcgatgctca ttctcgtata tagtatgctc accgcgtttt tctttattga
      661 caaagtgttc accaatatta ttttctttca aggcatgttt tatacacaaa ttttaggtat
      721 tcctgttttt atctttttaa atttagtcgt cattttttta tgtattattg tgggcagtgt
      781 gttagcttat aaaatcaatc aacaaaatga ttggctcaag caacaaatcg ttcgtgcctt
      841 tgaaggtgaa acagtgggca tcaatgatca acaactcgag ctgtataatg aaacgattga
      901 attatatcaa gcactcgtcc cattaaatca agaattgcat aaaatgcgaa ttaaaacaca
      961 aaatttaacg aatgaaacgt ataatttaaa tgatttgaag gtgaaaaaga ttatagaaga
     1021 tgaacgacag cgtttagcac gagaattgca tgatagtgtg tcgcaacaac ttttcgcggc
     1081 aagtatgatg ttgtctgcaa tcaaagaaac agatttagca ccaccgttag accaacaaat
     1141 tccaacgtta gaaaaaatgg tgcaagactc acaacttgaa atgcgcgctc tgttacttca
     1201 cttgagacct ataggattga aggacaaatc gttaggtgag ggaattaaat cgcttgtgac
     1261 ggatctacaa cgtaaagtac ccattaaagt cgtgcaagaa attgatgagt ttgaagtacc
     1321 taaaggcatt gaggatcacc tttttagaat tacccaagaa gcgatttcca atacgttacg
     1381 acatgctgag gggacgcaag taacggtaga attacttaac cgcaatgatt atttattgtt
     1441 gcgtatacaa gatgacggca ttggatttaa tgtcgatgaa aagttagaac aaagttatgg
     1501 attaaaaaat atgcgtgaac gtgcaataga gattggtgcc acatttcata tcgtctcatt
     1561 acctgatgcg gggacgagaa tagaagtgaa agcaccactt gaaaaggagg aacagcatga
     1621 caattaaagt attatttgtt gatgatcatg aaatggtacg tattgggatt tcaagttatt
     1681 tatcaacaca acccgatatc gaagtagtgg gagaaggtgc ctcaggtaaa gaagcaatcg
     1741 caaaagccca cgaattgaaa ccagatttaa ttttaatgga tttagtgatg acggatatgg
     1801 acggcgttga agcgacaatg caaattaaga aagatttgcc acatattaaa gtcgtgatgc
     1861 tgacgagtta tattgaagat aaagaagtgt atcgagcgtt agatgccggt gtcgatagtt
     1921 acattttaaa aacgacgagt gcgaatgata ttgcggaagc tgtacgtaaa acgagtcgtg
     1981 gtgagtctgt gtttgaagcg gaagtattag tgaaaatgcg caatcgaatg aagcagcgtg
     2041 cggagttata tgaattgttg actgagcgcg agatggaaat tttgttgttg atttcaaaag
     2101 gctattcgaa ccaagagatt gcgagtgcat cacatattac gattaagaca gtgaagacgc
     2161 atgtgagtaa tattttaagt aagcttgagg tgcaggatcg tacgcaagcg gttatttatg
     2221 ctttccaaca cggcttgatt gagtagaacg tacgagtatt cataaaaagg gaaagaggta
     2281 ggacataaaa attttcgatg ctgttgatgt aatatggttg ttgtacttgc ccttcctatg
     2341 acttgaggct ttagattgcc ctcatggctt cgcgttccga gggactggtc cttcaattga
     2401 ctactgtttg attaaactgt tacatttgtt gagacaatag tggattatcg gagcagtaca
     2461 gaaatctcat gtgtcacaaa gatttcgtct gactgccctt gcaaacattg agaagtcaga
     2521 cagctactgc tgacagtaac cactattaaa gagaagcggt aactgtcagc agtatgtatg
     2581 cattccatca gccgtctcag ccttttaggc aatcgtatat caaatacagc gcaaacagag
     2641 tgcaaattta tgaaatcaag aaaacgatag caacattttt tatatcccat ttacctctat
     2701 ttttcgaccg ctcgattacc attaatctat ttcagtaatg gtgatgaaac agtcaaaaaa
     2761 atgaggaaga gtaggaaata aatttttatc tcctactcct cctcaagttc gtttaatttt
     2821 gataggattc agcgcgctca taaccgttat gcacaaggtc taattcaccg gtatgcggat
     2881 caatgacaag accatgaacc ggcactttat tatcaaacag tggatgttca taaatcattt
     2941 caatgttgtg ttttacatta tcataaacat cgtcaaagcc ttttaaaaag ttggaaacat
     3001 cgatgccaga gtagttgaga atatcgatca cttgctcgtc gacaccacgt tgttgcatcg
     3061 ttgtcatcac ttcttcgaca ttaatatttc ccataccaca gtctttatgt cccataataa
     3121 taatttcttc agcccctaat gcatagatgc ctacgagtaa acttcgcatt gttgaaccga
     3181 atggatggct aatcgtagcc cctgcatttt taacgacctt taaatcccca ttattgaaac
     3241 cgagtgcttt ggttgataaa tcttgcaagc gtgtatccat acaagtgagt aataccgctt
     3301 tttttgaagg tgttttactt gttgaataag cttcgtacgc tttattcgct acaaattctt
     3361 cgttgtattc taaaatgtgt tctagtaatg tcattagact tcctcccaag attggtacag
     3421 tgttgtttaa tcttctgttg ttttaatatg ctttgaacga cctgtattcg tgcgttcgac
     3481 tatttctggt tctttgtatt gtggtgcacg gtctgttgac gtggtcgtgt catgtgttga
     3541 ttcagacgct gtgttctgta cgctctcttt atggcgcgtg tcgtttgttt cttgatcatc
     3601 attcacttgt ttatcgtctt tttcgccata attattatgt gcttcagcta agtcttcttc
     3661 gtcttctgct tcaagttcat catacgtttc ttcttcaggt gttttgcctt taatgacttt
     3721 acgttgatga acaatcgcat tgatttcagc accaataatt aaaataaagc cagtgatgta
     3781 caaccataac attaaaacga tcacgcctcc gatactacca tacgttttag agtagttggc
     3841 aaagtttgaa acgtaaaaac caaatgccaa tgaacctaaa atccatacaa tcgttgagaa
     3901 tagggcacca ggaataaccg atttaaatcg aattttcaca tttggtgcta acgtatatat
     3961 aattgtaaaa acaatcagta cagctaatac aggaagggca gtacgtaaca gactaaatac
     4021 ccaacgaact tgttcgtcta ggcctagtgg tccgaataat aagttgccga tttgctcacc
     4081 aaacgtaaat aagacgagtg tgagtggtaa tgtaatccca attaataatg taaagaaaat
     4141 cgctaacaac ttcgatacga caaagttacg gctatcttca acatcataag cgacgttaaa
     4201 agcattcatc atcgcagtca ttccgttcga tgctgtccac aatgccaaga tcaacccgat
     4261 tgagagtaga ccaccacttg cattacccat gacatcatca ataataccgg taatgatgga
     4321 ggacgtttct gcaggggcat tctttgaaat ttgtgctgta atcgtatcgc tatcaatgtt
     4381 aaagagtggg acgagcgata agatgaaaat caacattgga aaaagcgaca acataaaata
     4441 gtaagcaagt tgtgcggcta atccagatgc atcgtctttt ccaatacgat aaattaaata
     4501 gttaaaaaag ttcggacggt ctgtatattt ggctggtttg ttaattcttg aaacgaaaaa
     4561 tgtttgattt tctttcggtg cttctttaga ttgaaacggt tgaggcttta cgaatttatg
     4621 cttctcttcc gtttcacctg tcgcatctcc ttttcgatca ggagaaggcg tttcttcttt
     4681 ttgattttgc gcatgatcgt cattagaaat tgtctttttg actttatcaa taaagccttc
     4741 tgactgttgt tcgtttttag acatagctaa actccttatc ttaaaaatta aaaggggcaa
     4801 tctccaaggc atcataaaat gtgcattgaa attgcccttg ggtatgacag acgacatcaa
     4861 acatatgaac gacatatagc gtcaatgcat tgaaatgtga acgtatcaat gtgagtcata
     4921 tgagctgttc atacttaaga tgtcattgtc atccaacgat agttctaaaa atggttagat
     4981 taaagaccaa tttgtttgtt gtttttgcgt tccataaacg tatcttttgc gttgcgtaaa
     5041 gaacgttcta gttctggatt gttacgacga atttcgtcaa acgtattttt ccagtataat
     5101 acttcatctt tcacttgagt gaacttagaa ggttggcttg aacgttgccc tgttttaatg
     5161 ttattcactg atgttttcac agaacggcgt gtgtttttgt cgattaacgc aatcgcacca
     5221 ccgactgtag ccccaattaa gattccaggt aataatttgt tttgcataat gatgttaccc
     5281 ctttcgtgtg tctttaagaa tatagtctat taaatgatcc gtagatgact gaatcatttc
     5341 ataaacacct tcaaaattat ttgtgtaata tgggtctgga acgtctgttt cctccatatc
     5401 actgaattca agcaatttgt gcaccttacc tttaagatga ggattaatgt ccttaatatt
     5461 atctacatta ctttgatcca tggcaataat gtaatcaaaa tcatccgttt ctgtaaataa
     5521 ttcgctaatc atcccatcga aaggaatgtc atgtgctttt aaaatttttt gtgtaccttg
     5581 atgagggggt tcacctaaat tccagcgacc tgtccctctc gagtatactt caatgtcgtc
     5641 aatattgcga tcctttagac gttggcgcat aattgcctca gccataggag atcgacaaat
     5701 attacctaaa catacaaaag caactgttgt catgcagata acctccatgt tctaaatcta
     5761 tatgcccatt ttagcctttt ttaaaacaat tcgaaagtga tagcgacaaa aatttttcaa
     5821 atattcatca ctttgataaa atattggaga cgaaaggatg agataaatgt caaaatctat
     5881 tgaagaaatg attgtagaaa tacgcaatcg tttaaattta gtaaaccccg gattaattga
     5941 tccagaaaac tatagtgaaa atgatcgtga agatatagaa gatatacatg cgtttgtcac
     6001 ttcgaaacgt gactttacac cacgtgaaat gacaggtatt actgaagcat taggtgatat
     6061 tcgcaagtaa ttcgaattgg gaggttttta tatgacaact gagaaacgat tacaacaata
     6121 tgctaaattg ctcgtacgtg tggggatgaa tgtgcaacaa ggtcaacctg tgtacattcg
     6181 cacatctgta gaaaccgtgg acttcacacg tttaattgta aaagaagctt atgcagcagg
     6241 ggcctcggat gtaagagtga aatatgagga tcctcaagtt aaacgtctga cttacgaaaa
     6301 tgagccgact tcattttttg aacaagaggt taaaggctat gacgtagaag aacgcatgga
     6361 ttacgtgaac cgtggtgcat gtatgctagc actcttatca gaagatccag atttactgaa
     6421 tggcatcgat tctgacaaat taaaggcggc acaacgtcaa tacgcaaaag cttttaaacc
     6481 atacatgatt gcagcacaaa aaaatagttt cccgtggctt gttgcatgtt atccttccca
     6541 agcatgggca aaccgtgtgt atcctgaatt aagtgatgaa gaagcgatgg cgaggttttt
     6601 agaagatatt ttgagtattg tacgcgtcga tggcaatgat ccaattgaaa actgggaaag
     6661 acatgcacaa aacttaaaag tgcgtgcagc aatgttgaac gacaaagctt atacagcgct
     6721 tcatttcgtt tcagaaggaa cagacttaca tattggctta ccgaaaggcc atatttggga
     6781 agaaccgatg agttatacag aacaaggtca aggttttatc gcaaacatcc cgactgaaga
     6841 ggtgttcact gcaccagatt gtaacaatgt gaatggttat gtcactaata aattaccgct
     6901 cagttataac ggcaccatta ttgatggttt caaattaacg tttaaagatg gcgctgtcgt
     6961 tgattttgaa gcgaaacaag gagaagcagt tttagcagac ttactagaca cggacgaagg
     7021 tgcgcgtcgt ttaggtgagg tcgcattagt gccagatgat tcaccgattt caaataaaaa
     7081 cacgattttc tttaatacat tgtttgatga aaatgcatca tgccatattg cattaggtgc
     7141 tgcatatgcg tttaatttgc aaggtgggac tgaaatgacg gctgaagaac tgaaagccca
     7201 tggtttgaat gattcattaa cacatgtgga ctttatgatt ggtagtagtg accttaatat
     7261 ttacggtgta cttgaagatg gtacaaaaga acaaatattt aaagacggaa attggagcaa
     7321 ttaaacatat tgaggtgacg acatggcaaa aatagataaa aaagcgatgc aagattcgaa
     7381 agtttataaa tcgagacaag tatttccaca agacaccaat catctcggga cgttgttcgg
     7441 tggtacaatg atggcgaata ttgatgaaat tgcggcaatt tgtgcaatga aacatgcgaa
     7501 tcaaactgtc gtgacggcgt ctacagattc agtagacttt ttaaaaccga ttcgtaacgg
     7561 tgacatttta acgtatatcg cgatggtttc gtattcaggt agttcatcaa tggaagtttg
     7621 tgttcaaatt ttaattgaag atattccgaa caataagcag gagttagcag cactcagctt
     7681 tttaactttt gtcgcattag atgatgacgg caagccaaca aaagtgcctg cagtatatcc
     7741 tgaaacggaa gcagaaaaat ggtttcacga aacagctgaa gcccgtgtag cacgtcgaaa
     7801 agcaagaaga caagaaagta aacaaacatt gcaatttatt tcagaattag aatttaagca
     7861 ataaacaata gaaaggctgg gaaacgtcaa aaactgcttc ctagcctttt ttagcacgca
     7921 tctattcgtt attgattaaa aagtgtatgc atacgcgctt cttgtacctt aaaatcaaca
     7981 tttggataat acatattttt aacaagaata ttcggtccga gacattcaaa ttttggacaa
     8041 tgacaattaa ttgcctgagc taaaggactg tccaaccatc tttggaatac atccgtcaat
     8101 tgatcatgac gaatattaga aattgtacct gtttcatcac caaaatctgt cacaataaca
     8161 tctcccgtaa acacattcac atttaagcga ctgcggccat caggatcatt acgcatcgtt
     8221 acattcggtg cttgttttag cttttgacgt aatttcgcat ctgcttcatc ttgcaaacaa
     8281 gggaatatcg gcaaagttcc aaacaacatc cacgtgtttg aatcacgcac atctaataaa
     8341 tgtgaaatgg cttctttcat cgttttcaaa tcgagcactt ccaattggct cgcaaaatca
     8401 gcagggtaca tcggatgaat ttcatgacgt tgacatttca tatcattcac gacttcacga
     8461 tgaatagacg tgagatgtgg ataggtactt ttgtttaaca tcgtttctgc tgagacgaac
     8521 attccttgct cacttaaagt acgtgcgttt gaaatcattt gttcatacaa tttcaatttc
     8581 gcttttaatg ggggctgctt ttccatcgca ccgaaaccga cttcagtaaa agtatcaatc
     8641 gtgccccaat tgtgtgaaat atggaggaca tcaatatatt ctgcaatgtc caaataacgg
     8701 tctaacggta aagttaaatt cgaattcaat tggacatata ttccacgttg atatgcgtac
     8761 tttaataatg gtttaactac ttcacgaatc gatttttttg aaaacatagg ctcgccaccc
     8821 gtaatagaaa tcgtacgtaa cgttggaatt tcatctaaac gttgtaaaat taatgacatc
     8881 ggtaatatat cggggtcttt cgtttgtaat gtatagccca cagcacaatg actacaacgc
     8941 atattacaca aattcgttgt cgtgaattcc acgttgctca gcgtcaattg tccgtattgt
     9001 tctatatctg tataaggctc ccacgggtca ttaaatattg aaataggctc cttttgggtc
     9061 gttaacattt ttaaaaactc ctcatcttaa aatacatgat cacttgatat ttaccattga
     9121 ggaaaatcaa attcatgtta atataactat gacaactgca attataaagg agaatcgtaa
     9181 agtatggaag agccacaaac tatgaatcaa gtgaaagaga gactttctca atttttagaa
     9241 gagattgaac atgcggatcc aaacaaggtg gatgttgcgg atatcgacga atggcttcaa
     9301 ttgttagacc aacttgaagc gaaagtgaat caattacgtc aataaatatg ggtcaatatg
     9361 tttgaacgat ttactttggg gtatacattg aaatagatat ttaaaagaaa ggtgatgcaa
     9421 attatggcaa aagtagctgt attattagca gacgaatttg aagatgttga attcacaagc
     9481 cccaaagaag cacttgaaga agcgggccat gaaacggtag tcattggtac aactgccaat
     9541 gctgaagttg taggtaaaca cgggactaaa gtgactgtgg atttatctat tgctgatgca
     9601 aaaccagaag attatgatgg tttattatta ccaggtggat tctcaccaga catattacgt
     9661 ggagatgcag aacaaagatt tggtactttc gcgaaatatt tcttaaaaga agatttacca
     9721 tcattcgcca tttgccacgg accccaaatt ttaattgaca cagatgagtt aaaaggtcgt
     9781 actttaacgg ctgtgcttaa tgtacgtaaa gacttatcta acgcaggtgc aaacgttgtt
     9841 gacgaatctg ttgttgttga taaaaaatta gtaacaagtc gtacacctga tgacttagat
     9901 gactttaata gagaaattgt aaatcaattt aaataatatg tgattgattg agagcgagcg
     9961 ctagaatttc tagtgttcgc ttttttaata tgtcctgttt ttgatacata ctcatatatt
    10021 taaaggtttt tctagtttgc agaactaacc ttcgctttct tagggggcct caactcaatt
    10081 cagcttgagt gtagtgtaca tttaaatgaa gctgtattgg attttcggct gggtctgatt
    10141 catcaacagt ctcgggaagt tcttgtcatc taacagttta tggcaaaaaa tgaattgtgt
    10201 tgtaatagaa agcgaacgtc tttagcactc gcagttctta atttctatga ttacaatttc
    10261 aagtgaaact tcgaatgtga gaatggtcgt aatacgaagg gaaagtatat taagtgttta
    10321 cacttctcat ttattttaat tgatggaaat cactttgcat tgccgatttt tatatttgga
    10381 ttgagtcgtc tgaatatgaa atttttacaa tttacattgc ctcaaaatgt cttaaactta
    10441 catttgaacg taacagttga aaacggtaaa aaaacagcac aggtgatttc acctatgctg
    10501 cttgaatgtg cttataagaa acgtcttact gctgttgtta atgatggcat ttcgttaaaa
    10561 ataaatttgc ggtcttctgt taagctacgg tatgcccatt ttgcataatt tatcgcttgt
    10621 tcaggcacga ttttacctgg aagtggtgca gcatttttat ctacatacac attaacgatt
    10681 gttggtttgt gttgttgtac tgctgtttgt acgattgaat caatgtcttt cggatctttt
    10741 aatgtgtaac cgacaccacc acaagcttct gcaaatttcg cgaagtcaat atcactaaag
    10801 tcgataccgt actctaattc acccgcttct tgttgttcat atttaataaa tgaaagttca
    10861 ctgttattaa ggacgaacaa caccattggt aaattgtatt gcaccgctgt tgagaagtcc
    10921 tgcatcacca tttcgaacgc accgtcacct gtaatcccaa tcacttggcg gccagggaaa
    10981 gcaatgcgtg atgcgatagc tgttggaagg gcacaaccca ttgtaccgag ccaacttgaa
    11041 ataatgaagt ggttgttcac acctaagttc aagtaccgtg ttgaccatac agttgatgtg
    11101 cccacgtcag ctgcaatgac cgtatcatca gtcataactt tattaatcgc atctatcaat
    11161 cgttcaggac ggattggtga agcatcatta tttttatctt cagtcatcca acctttccaa
    11221 gtttcacgat ggtctaacat ttcatttaag aatgatcgtt tttcgacagg ttgaattgcg
    11281 tctgtcaatg cgcgtaatgc caattgactg tccccaacga taggtgcatc gacatcaaag
    11341 cggtgaccga tagcttctgg attttcatcg atttgtatcg ctggtatgtt tttcttcggt
    11401 aaataatcca catacggata gttcgtgcct gctaaaatga gcaagtccgc attttgcatg
    11461 gcttggtaag aaggttttga accaatttta ccgaggttac caagattgta tggatggtca
    11521 tcgcctacaa tcgtttttga tggcaacgtc acgatagttg gaattttacc tttttcaatg
    11581 aattcacgta cttctgcttt cgcatggtct gtccctttac cgactaaaat gacagggcgc
    11641 ttactttcat tgaataactg tgcagcgcgt tgaatttcgt ggcttaaagg ttgacgacgt
    11701 tctggtacgt aaggttcaac ttctgtagga aaattgtcct caacttttgt atttaaaatg
    11761 ttgtttggta aggtcaacac tgcaacacct ttttcacgat atgcggtacg aatcgcttcg
    11821 tcaacaattt cgaaaatacg tgtcgcatca ctctctttca attgatagtt gtaaactgca
    11881 acatcttcaa ataattttgg taagtccact tcttggaatg cttttgtgcc tagtttatga
    11941 ctgtctgctt gtcctgataa tacaagttgt ggcacattgt ccattttcgc atcgtacatc
    12001 ccgtttaata aatggatggc accaggtcca ccgattgcaa gtgaaactgc aattttgcca
    12061 gttaatttag tataagcggc tgctgcaaga cttgcgactt cttcatgtcg tacgtgaata
    12121 aagtcaatgt cgttttcagc tacttttaat ccatcgacaa cagcatcgat agagtcacct
    12181 ggtatcccat agacatggtc aatatcccat gcttttaatg cgcttactaa cgccatattt
    12241 gcttttactt ttcccataat aatgattact ccttctgttt tgattctctt tatgacagtt
    12301 acatacccat tttttcacgt tcagtaacaa tcttcaatgt tcgtgctcaa gctcgttcta
    12361 cagactgatt tttgccgaaa catatagcat aattttgaag gacttggtaa actcacatta
    12421 ttaagtgatt taatatgaga aagtaggtca cacatatatg aaaagaagag gccgaatagc
    12481 caagcctgca ccgcacaatg aaccacatca caatacgtat tatcaacctg tcggacaacc
    12541 gccgaagaaa caaaagccac gccgtatttt tcgcacgtta ttgatgttga ttgtattagc
    12601 aggtgcatta tttattggtg cgatgtattt tatggcacag cgcgcggaca tagatgaatt
    12661 aaaaagtatt gaacaaaaaa gtagttatgt cagtgcttca caaatgccag attatacaaa
    12721 aggggcattt atcgctgtag aagatcgtcg tttttacaaa cattcaggtg tagattatcg
    12781 aggaagttta cgtgcgattt ttgcatcggt gcgtgaccgt gatcgtttac aaggtgggag
    12841 tacgattaca cagcagcttg caaaaaatta ttattatgat aaccaacaga ccgtgacgcg
    12901 taagttgaaa gaaatgtttg tcgctaaacg gattgagcgg tattacgaca aagatgaaat
    12961 tttaagctac tatatgaata atatttatta tggcgacaat cattatacaa ttgaatctgc
    13021 tgcgaatgat tattttggtg tcacaacaaa tgaacaaaat tacacattac cgcatattac
    13081 agtattacaa agtgccatat tagcaagtaa ggtgaatgcg ccttccgtgt acaatgtgaa
    13141 tgacatgtca ccttcattta ttaatcgtac gaaaatgacg ttagaaaaaa tgaaacaaca
    13201 agaatttatc aatgaacaac aatatacaga agcgttgcaa caacttggtg cttaatgtat
    13261 gaatatggca taataaggac atgaagtgtt gaggaaaacg agacaatttg cgatttctat
    13321 cactgcacaa actttaatgc cggtcacgac gctgtcaaca gagtggggta gagcattgga
    13381 atctaattat atttttagat ttgagctcta ctctttttct tatttaaagg ggtgaaacga
    13441 tgtcaaaaat tactaaaatt gaagtgcaaa aaaataatca tgaacgtttt aacatttata
    13501 ttgataatga atttgcgatc ggcatttcaa tagatacgtt ggtggcgttt aatattaaaa
    13561 agggcgatga actggacata gatgaactta aatcattggc ccaacgtgaa tatcaacagc
    13621 aagcgaacaa tcatgccatt caatatttgt cctatcgcaa aagaacacgt aaagaaatcg
    13681 ccatacagct aagaaaagaa ggttatgaag aagacatcat tcacgaagcc attgcttatt
    13741 gtgagcgact taaactcatt gatcaccgcg attatatgat cagtttaaaa aacacgatgc
    13801 tacgaacaac ggataaagga ccggaagtat ttcgtcaaaa gctacatcaa gcaggaattg
    13861 aagcggattt gatagaagaa ggcgtccgtg tatacgaaga ggaacaacca ttcgaaagca
    13921 tagtagacat tggtcaaaaa ataatgaatc aaaaaaaagg acctccctca aaagtaaagg
    13981 tgaaagtaca acaatcccta caacaaaaag gattcaccct agacacgata tttaaagtga
    14041 tggatgcatt agattttaaa caggacccag aaactgtgga taatttattg caacgtgatt
    14101 tagagaaagt ctataataaa tatcagaaga aatatgaagg aaagccttta tatatgaaaa
    14161 cggttgaggc attactaaga aaagggtatc cgtatgacga tatccaacga aaactgacag
    14221 aaagtggtat tgatcatgat tgaaaaacga ttaagcgaca tggatagaca agaaatttta
    14281 catgttatcc agacgagtaa agagaaaatg cgaaaagctg aaatgaacgg cattatgaat
    14341 gaatatgatg tttatgcgaa taaagtagtt attgcagaga gttatttaat cgacacgaat
    14401 gaaattgaac ttggtaaaat ttatcgcctt aaagatggta caggcaatta ttttaaagtc
    14461 gaacgtctca aaggggtatt cgcatggggc tatcgcatta atggggcgga agctgaagaa
    14521 ggtttaccaa tttcattatt acaaatatag aagggacttt agcgcatggg tagttcaatt
    14581 gtcttgaaga tgattaatgt cacacattat tatcgtaatc aaaaaaagca aaatgtgctt
    14641 aaacctttta gttatcaacc agaagatatt gagttgaaca acatttctct gcatatttat
    14701 gaaggtgaag cgctagggat tattggtgag gctgaatcat ctaaatcatt aatcggtgaa
    14761 attttagctg ggactgtcga acccgataaa ggaagaatcg cacgtgctgc atcaatgttt
    14821 tatgcgaata tgaatcaaaa atcagttgaa aatattctag tgatggacta tgtaaaagat
    14881 gtcattcaac tgtttcctta cgatgcacct gaacataaag ctacacaagt cattaagtat
    14941 gcacatttag aagctgtaca agatgaacgg gtcaaagact taacagatgc acaatatgcg
    15001 cagttgttat tcagcttagc acgcgcatca gaagcaaaaa ttgtcattct aagtcatata
    15061 ttgagtgatt tagatgaagg attttttgaa aaagcaaaag taatggtaga agattatatc
    15121 gaccgcgaat ggacttggat tgcgattgac aatgatgtcg aaaaagtgaa agctgtgagt
    15181 aactatttag catggatttc acacggtcaa gtacgtaaag aaggctcgat taaacaagta
    15241 ttgccttatt ttctgtcgca tcaacgggat atggcatcgt taacgacagc ggaagaacga
    15301 gaacactttg atgaagactg gaagcgcaat cgttcacgca tgccagagct tacatataat
    15361 tttagacgga ttgaacgtta tcgtcatgcg caaccaccag cctttttatc gcgaatatgg
    15421 acttggttgg cactgttttt tcttggtatg tgcatggcag gtgtattaat ttttactaac
    15481 ttaggcaaaa ttgcaagcgc accattagtg acccaagcaa ccatttcgaa atcgacatct
    15541 gatccatatg tggacaaatt agcttatggt attgtaaacg acagtgaaat gacgatcacg
    15601 ccattagaca ataagggtaa agaagaacag ttaccgcact atacagtcgc atcgattacg
    15661 ggtgagaata aaacaacgta ccgcattgaa gtggatggca aaagttataa agcaaacaaa
    15721 gacaaattcc tttatttaaa tccagcagca ctttataaag aagtcgatcg taaacagtta
    15781 gaaccttata tgaaagacaa ctatattaac tttgtcgatt actttaacag tgtactccat
    15841 aaatcacata aaaaggtgaa tgaaacactt gtgccagaac atgaacaacg atttgtagag
    15901 ccgattgtcg aacagccgat ttcaatgttg tttgatgacc gcgatcattt actcggcttt
    15961 acatttccaa tcgtgaagca agacaaattt aaagatgaat ttaatattaa aaccgatatt
    16021 tggatgagca aaacagattc aggttatttc attgccgatc ttaaacattc caaatggatt
    16081 tatatcgaat tgtaggtgat gagcgtgtta gaaaacttaa ttcatttttt tcataatcga
    16141 acgagattgt ttagacacag taaatatcgc cttcaaaaac atcgcaaatg gacagcatta
    16201 acttttttaa ttgcatttgg tttaatggtt ttaaccgcaa tagcttttta ttttttagat
    16261 atcgtggaag tgacacaagc gacttttgat tatcgactga cagggctagt cgcttttggt
    16321 gtcatatggg ttgcgattta tatccattac cgcttctttc ctagagatta ttatgtgacg
    16381 cgtcacttta atatgagtcc atttttccat attgttttgt cgagcggcat gcataccata
    16441 atattaactg ttttaatgac tgtcatggct tggttaaaac cattgaatac tgatacgacg
    16501 tgggtaggcg tattctttta tagtgcgatg tcgtttgttt ttattgtcat catgtcattt
    16561 ttacttggtt tagtgtatgt gctctatcca aagttagacc gtgtctttac attgattgtg
    16621 attttgacat ttttactcgt gcctatcctt tatatcccac ctaatagtaa cggctgggtg
    16681 acacatgtga tgatgctgaa cccgatgtat tatctagtca atggcatgca acaagctgtc
    16741 atcgttggcc atgaagccat gaatcatctc ggttatcatt tttatttcat gtgtttcatt
    16801 ggattgatga ttgtattttg ttatgcatta aaagattatg tctcacaatt aagaccaaac
    16861 gaacaccatc aatcaaaagt acaaaaagaa aaagccgaat aaaccaaaag ctgtgaaaca
    16921 acgacatctc atcgttgcac acagcttttt tgtttgatgg ttttgaagcg gtaagggcta
    16981 ggaaacacgt tttaacgcta aggtgaagga gatatgaagc accatgaata caagtgatta
    17041 attaatgata attagtgcat ttattcagtt taagaaacat atcagataac agaacgacgc
    17101 tgcgataaaa caataaaaag cctttaaggg gagcaaagct aggcgagact cctgaggtat
    17161 cagctgaaac aaataatcca ctatcgcttt catgaatgta acagtaaaat taaaaacgtt
    17221 tgttagttga agtttcagcg cctaggaaga cgagtctaaa gcgtgcaacc cataaaggct
    17281 aaataatttt aaaaactgca gcatcgtgtt gcaatctaag gtttgattgg agtaaaacca
    17341 gttaaatcgt tatagtatat catcacgctg aattaatgag tgagtaattt tctcaataac
    17401 ttctcctcac taaacaccca ccctgtatac gaatgcttca ccttcatctc ttgatcaaga
    17461 tgcaaaatcg ccacaaactg ataatgccca tccttcaaat aacgcaaatc aataaatcgc
    17521 agctcagtcg tataagaatc aacttgtctc acatgccaac gataaatgga agaaaagttc
    17581 agaaaagctt tcacattttt atcatattgt gcatatttca tgattgcatt acttggaaaa
    17641 ggctgacgtt ctaccttgtc actaaacaca atattacgtc cataactgcg accgacataa
    17701 tcgtgttttt cagtttggat tgcgatacgc cattgcataa aacgaagggt cggtgctaca
    17761 aaaactttaa ttggtgtgcc gagatgttcc acttgattta aagcttgttt ttttaaccaa
    17821 ctgcgcattt gaaatcttaa aatataatat acaatgagga caattaacac tggaataaac
    17881 acaacataag ggtgtacacc gatggcccaa atggcgatac cgacgagcaa aatcgcaaaa
    17941 ataatcggat caaatgtatt aatgacactc aattgaatcc atttattcga aaagggccgt
    18001 aatgcttgtg taccatatga gttgaaaata tcaacaaaca catggagaaa gacggcgagt
    18061 tgtgcccata accaaacatg taagggatcg acatgtttga aaaggctata gaccagtaaa
    18121 gttaacaata atggccaaag taaagtaaaa ggaatagaat gtgtaatgcc tctatgattt
    18181 gaaatatatg ttgcattatc ttttaatttt agtacagtat cactatcagg aattaaagaa
    18241 cctgcaatca gtacggttgc tgttgcagcg aagtttccgc tcatagcagc atccgtcgtt
    18301 gcgattgctg taagtccaac gcctatcgcg atgtgtgtgg ctgtatccat aatgtctcac
    18361 tcttttcaat ataacgtaac tttattatag tcgattattg aaatgaacaa aaatcattaa
    18421 tatatgcaag gagaattgaa atgttagatg aacttacatt caagccacat ttattggaat
    18481 ggtttgaaaa ggaacaacgg caaatgcctt ggagagaaac gaaaaatccc tattatattt
    18541 ggattagtga agtgatgtta caacaaacac aagtcgatac ggttcgtgat tattatcatc
    18601 gttttgttga agcgtttccg acaattgaag atttggcgaa tgcagatgag gacgatgtat
    18661 taaaactatg ggagggtctt ggatactata gtcgtgcacg taattttcac actgccgcca
    18721 aagaagtcgt cgcatttcat gatggaagcg taccacaaca tccagagaca tttttaaatt
    18781 tgaaaggtgt aggtccatac acccaagcag ctgtgatgag tattgctttt gatttaccgt
    18841 tagcgacagt ggatggaaat gtctttcgtg tatggtctcg tttaaatgat gatacacgtg
    18901 atacggcgct tcagtcgaca agaaaagctt atgaaaatga gctggcgcct tatgttgcac
    18961 aacaatcagg tgattttaat caagcgatga tggagttagg tgcacttgtg tgtacaccta
    19021 aagcgccact ttgtctattc tgtccagttc aaatgcattg tgaatcctac gaacaaggga
    19081 ccgtattaga acgtcctgtc aaaacgaaaa agttgaagaa aaaaacgttg aaatttgatg
    19141 tgtatgtcat tcaaaatcaa tcaggagact ttttaataga acaacgtaca gcatcattac
    19201 tcaaaggtat gtggcagttt ccgatgattg aacatggtgc gaaagaagac atagaaccaa
    19261 ccttagacat caatcattta acgattcaac gtaaaaatgt agtgaaagtg aaacatcaat
    19321 ttacacattt gacatggcat ttgactgtac atactgcaac ggtggatgaa acggtcgcac
    19381 cggttttcgc aaatggaaga agatggatgg catccgttga aaaggataac tactcttttc
    19441 cagtcccgat gacaaaaata tttaacgcaa taaatgaagc ggaataatta agtaatagga
    19501 atggaatatg atataataac gaggtgaatt tttaacaagg tggtgtgaga agttggtcaa
    19561 atcgtgtata cctcgagaag gggaatcgat taaaattcaa tcttataaac acgatggcaa
    19621 tatacaccgt gtatggtccg aaactacaat tttaaaagga acagcagatg tcgtcatcgg
    19681 tggtaatgat catacgcttg taaccgaaag tgatggccga acatgggtaa cgcgtgagcc
    19741 tgcaattgtc tatttccatt cagaatattg gtttaatgtc atttgtatgt ttcgtgaaga
    19801 tggcgtttat tattattgta acttatcgtc gccttttgtt tgtgatgaag aagctttaaa
    19861 atatatcgat tatgatttag atattaaagt ttatccaaat ggcaaatatc atttat
//
LOCUS       DANHPA010000044        19780 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.044, whole genome shotgun sequence.
ACCESSION   DANHPA010000044 DANHPA010000000
VERSION     DANHPA010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 19780)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19780)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19780
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.044"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(135..341)
                     /locus_tag="PTC28_001248"
     CDS             complement(135..341)
                     /locus_tag="PTC28_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716541.1"
                     /translation="MQLMLAFGDLLLYFEATSLAAGIFSLWHLNADDAKLQKVGLIWF
                     IINLLNIFVLTPLIILVLFFGISF"
     gene            complement(937..2079)
                     /locus_tag="PTC28_001249"
     CDS             complement(937..2079)
                     /locus_tag="PTC28_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional cystathionine
                     gamma-lyase/homocysteine desulfhydrase"
                     /protein_id="HDK5716542.1"
                     /translation="MNKKTLLIHCGNTTDDYTGAVTTPIYQTSTYEQDAIGELRQGFE
                     YSRTANPTRSSLESVIADLEHGNYGFAFGSGMAAISAVIMLLDQGDHIIVGSDVYGGS
                     YRAMTRVFTRFGIEFDFVNTTDVQNIEDKIKDNTKMLFIETPSNPLLRITDIQAVSEI
                     GKQHELMTVVDNTFMTPYYQTPLSLGADIVVHSATKYLGGHSDVVAGLVAVKDETLAE
                     RIAFVQNSTGGVLGPQDSYLLIRGMKTLALRMEQIERNALAVVEMLNQHDKVTKVYHP
                     SQPSHLNYDVHQAQADGTTGIISFEVADVEKAKFLVRQTKYFTLAESLGAVESLISVP
                     SLMTHASIPADIRAKEGIADGLIRLSLGIEDTDDLVEDLKQALDQL"
     gene            complement(2072..2977)
                     /locus_tag="PTC28_001250"
     CDS             complement(2072..2977)
                     /locus_tag="PTC28_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase family protein"
                     /protein_id="HDK5716543.1"
                     /translation="MRNFDLIGRTPLVQLEHYSTDRVQIFAKLEMHNPGGSVKDRLAK
                     YLIERAMEDGRLHPGDQIVEATAGNTGIGLAIVANHYDIKCIIFAPEGFSEEKISIMR
                     ALGAEIHRTPQAEGMLGARQWAESYADETGAFYTNQFETRNNPAAYRDTLAVELIEAL
                     PDLDYFVAGAGSGGTFAGVAEALQPHDVKSIVVEPPGSILSGQEKGRHDTEGIGVEVW
                     PQFLKREWIEAVEVVPDEVAFQHVKDLARYEGILAGSSSGAALEGAIRAASRLEQGTV
                     VAIFPDGSDRYMSKKIFQYGGDLNE"
     gene            3260..4585
                     /locus_tag="PTC28_001251"
     CDS             3260..4585
                     /locus_tag="PTC28_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase/lipase family protein"
                     /protein_id="HDK5716544.1"
                     /translation="MELHTPKGTIHGERHTGYEVFKGIPYAQPPVGALRFKHAQLLLT
                     WPKDFQATSFGPVPIQPPNSLESFFDTHVQDYPQSEDCLTLNIWRPATPAHQPLPVIV
                     FIYGGSFVNGHSAQALYHPHEIVNRESVIVVTLNYRLGALGFLDWSTINPEWDANNGL
                     SDQICALQWIRENIAHFGGDPEHLTLMGQSAGAMSVAAMLRMPTVRPWIKNAVMLSGT
                     LHLESPQVASDKADAFAALKAQHYASTPWHELDAQGILALMARHQMQYGPSKGLELLY
                     QPVATDDIELDYRHVNVPVLLGHTTAEGDIYIKNEQKKLAPQQFQRVIQRLEGPVPPL
                     EDIETAQQQRDLITNWHFKAPFQQLYQALSAVTPTWQVTFNWSRGDHPDYASAYHILD
                     MIFWMGRLDILAAHGLEVTARETELRKRMIHDLCHFAQHSTLDGNRFYE"
     gene            complement(4735..6063)
                     /locus_tag="PTC28_001252"
     CDS             complement(4735..6063)
                     /locus_tag="PTC28_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDK5716545.1"
                     /translation="MSQRSQWKSSTGFILASAGSAIGLGALWKFPYMAGMFGGGAFLF
                     MFLAFTILVGLPLLIMEFAVGQLGRTYTTELFGQLTGRKWLNGIAWIGNLAVFVLFSF
                     YSVIGGWIIVYFGFVLAQLFHIVPTHLHDLQFQAIISQPLYVVTGQAIFIALTCGIVM
                     RGVQQGLEKASKLMMPLLLVFLIIIVVKTLSLDGAMDGVRFLFQPRVSEINMESMLFA
                     LGQSFFALSLGTTGMMTYASYASTDMPIKTSALTILIMNIAIAILAGLAIFPALETFG
                     YQAKEGPGLLFIILPLVFEKIQFGTLFYAIFLVLFLFAALTSSISLLELNVSNFTRNN
                     NRKRPTMALIISLAVFIVGVPATLSFGPLSHIQFGAGSIFDNMDFVFSNILLPIGALA
                     STLAIGYAMEKVRLKTGFGNDPLKLFAIWYIFIRYILPVVILLVFILQLV"
     gene            6247..6435
                     /locus_tag="PTC28_001253"
     CDS             6247..6435
                     /locus_tag="PTC28_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716546.1"
                     /translation="MSQKLKERIYLIAIIVSTLCVLSSVLFGLSPTITATVTFISIIV
                     FAILYFVVPNKQQNRKLR"
     gene            complement(6628..7317)
                     /locus_tag="PTC28_001254"
     CDS             complement(6628..7317)
                     /locus_tag="PTC28_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000858967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDK5716547.1"
                     /translation="MNTKILVVEDDAAITHLLDVSLTLDYYEVITATNGKDADFQIRS
                     KAPDIILLDLGLPDIDGLELIKRIRQTFDIPIIVISARLDEQTIVEALDNGANDYMTK
                     PFNVDELRARIRVVQRLENMQNQKEIVFENGPLVVSYQAKTAQIDNQLLNLTPHEFAL
                     LELLCRHVGKVLTYDTILKAIYGYVNQSEMPSLRVHMTSLRNKLTQAHPESKQLIITR
                     PRIGYQMQYWQ"
     gene            complement(7331..9955)
                     /locus_tag="PTC28_001255"
     CDS             complement(7331..9955)
                     /locus_tag="PTC28_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase KdpD"
                     /protein_id="HDK5716548.1"
                     /translation="MERHLTIKRGALTIYLGYSPGVGKTYEMLSNAIDAYHEGADIKI
                     GYIEPHQRKETQALAEQLPVIQTKSKNHGSHTFHYLDVDQIIEDDPDVVLIDELAHTN
                     ISKERHEKRYMDIEEILSHGIDVHTTLNIQHIESLSEQVALLTGVKIKERVPDQFIMS
                     SDAIEVIDISPKQLINRLKAGKVYKKERLDTAFSHFFTYENLTELRELTLRTAADMMS
                     QKEHLYKKNTDITPHVAVAISGSISNETVIREARRIANREHAQFTAVYIDVFDHEGKQ
                     YANNSQVHQNLMLAQSLGASVKVIYDNQIASGLDDWCKSQKVTKLVIGQHMNDKWHTR
                     LKRPLIDQLLDLKHHYKIEIVPIKHIQMKAKPERQHQHMQQKRWTVDIFKMIAIQAIC
                     VLLGLWIYSTGKGEQDTIILLLFLLGIVVLSMWTQSYLIGFFAAILNVLVFNFFFTVP
                     RFTFEVYRFDYPITFTISIIVSIVTSGLLKQIKHQYIVTKHQLYRTDILLQFNDSIKQ
                     TYTIPDLLVNARHQIQHLLKQEVTIYLVEDEKISKTIPVEGPQTNDSRHQQALSWIIK
                     NQKRAGATTDTFPGIHYLLIPIGTKPVKAIVSIHFSEAQIIDSYDNSILESMLNEMSL
                     AVENLSLLRQTRESMLRAEREVARAHFLRSISHDIRTPLTSIIGNLDVLLLNGKEMPR
                     AEQQQLVSRSFDEAQYLHMLVSNILSLTRLEHSNMKLNRQLYLIEELVEEIESVLERR
                     RLNKQVKVSALHEICFVDIDSQLILQAVFNLIENALKHTPPETPITLRINKNEPHILF
                     EVIDRGPGLSDEEQQTIFQPFEKHQLFKDNKKDSMGLGLYLVQAILQKHDSQLKYRQN
                     EPHGSIFYFNLPFEKNTN"
     gene            10123..10203
                     /gene="kdpF"
                     /locus_tag="PTC28_001256"
     CDS             10123..10203
                     /gene="kdpF"
                     /locus_tag="PTC28_001256"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF021144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
                     /protein_id="HDK5716549.1"
                     /translation="MISILGLIVIVLIGYLIYALIYSEKF"
     gene            10229..11905
                     /gene="kdpA"
                     /locus_tag="PTC28_001257"
     CDS             10229..11905
                     /gene="kdpA"
                     /locus_tag="PTC28_001257"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit A"
                     /protein_id="HDK5716550.1"
                     /translation="MEIVIFLITFFLCAFLLSRYLYSVALLTPTPADKVFSGVEKGIY
                     KVLGTQLEHMSGKTYLKHFLLFNGLMGALTFVLLLIQQWLFLNPNHNLNQSVSLAFNT
                     AVSFLTNTNLQHYAGESGLTYLTQMMVITYLMFTSSASGYAVCIAMLRRLTGMTDIIG
                     NFYQDMVRFLVRVSIPLSFIVSLLLISQGTPQTLKGNLTLHTITGKVQHIAYGPMASL
                     ESIKHIGTNGGGFLGANSATPFENPTVWSNYIEMLSMMLIPGALVFLFGRMLTKNGKH
                     IHAHAYVIFGTMLLFFLVCFVIALIAEYKGNVVLAHLGVIGPNMEGKEVRFGPGLSAL
                     FTAITTAFTTGTVNNMHDTLTPIGGLVPIVLMMLNAIFGGEGVGLMNMLIYVLLTVFI
                     CSLMVGKTPHYLGMKIEGREMKLIALTFLIHPVLILIATALAFIVPGASAAITNPSFH
                     GISQVLYEMSSSAANNGSGFEGLSDNTAFWNISTGIVMLLARYTPIILQVMIASSLVN
                     KKAYQKSDQTIAIDKPFFGVSLTIFIILLSGLTFLPVLLLGPIGEFLSLK"
     gene            11921..13945
                     /gene="kdpB"
                     /locus_tag="PTC28_001258"
     CDS             11921..13945
                     /gene="kdpB"
                     /locus_tag="PTC28_001258"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000852430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HDK5716551.1"
                     /translation="MKQSSHVLNSAIVRQAIKESFIKLNPVSLIKNPIMFVVEVGMVL
                     TLIMTIVPQIFTDGAMSRLYLFTIFIILFFTVLFSNFSEAIAEGRGKAQANSLRETKS
                     HMIARRIVNAEVYETVDASALKRGDRILVKSGEMIPSDGTIIKGIATVDESAITGESA
                     PVIKESGGDFSGVIGGTTVTSDWLIIEVDSEEGATFLDKMIALVEGAQRKKTPNEIAL
                     FTLLMTLTIIFLVVILTLYPIAQYLNLNVPITSLIALTVCLIPTTIGGLLSAIGIAGM
                     DRVTQFNILAKSGRAIETCGDVDVLILDKTGTITYGNRLAESLLPVREEWYDRLLVAA
                     YESSVEDDTPEGKSIVTLAKRSSVQLPEEVKGDYRPFKAETRMSGIIIGERSVFKGAP
                     NSMLKYVKQQGGVIPSNIEALVTEVSSKGGTPLIVVENQTILGVIYLKDVIKKGLVER
                     FQELRQMGIETVMCTGDNELTAATIAKEASVDRFIAECKPEDKIKVIKEEQEKGHIVA
                     MTGDGTNDAPALAQANVGLAMNSGTLSAKEAANLIDLDSNPTKLMEVVKIGKQLLMTR
                     GALTTFSIANDIAKYFAILPAMMMVTIPEMSRLNIMQLHSPESAIISALIFNALIIAL
                     LIPIAMKGVRIKGASTETVLMKNMLVYGLGGMIVPFIGIKLIDLLIQWWL"
     gene            13956..14516
                     /gene="kdpC"
                     /locus_tag="PTC28_001259"
     CDS             13956..14516
                     /gene="kdpC"
                     /locus_tag="PTC28_001259"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit C"
                     /protein_id="HDK5716552.1"
                     /translation="MKTIRSSIGLVVMTMILCGLIFPLAVTAVGQTLFHHQANGSLVT
                     QNNQIVGSELIGQQWDEPQYFHGRVSAVKYNMDAAMIKGNGVASGSHNYSNGHPELQQ
                     RVAALKQINGHTPIDAVTESGSGLDPDITVDNAKQQVARIAEHRNLSTEQINQLISNQ
                     AHQGTLYDDDVNVLALNLALDRMSGH"
     gene            complement(14633..15273)
                     /locus_tag="PTC28_001260"
                     /pseudo
     CDS             complement(14633..15273)
                     /locus_tag="PTC28_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002450207.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
     gene            complement(15539..16354)
                     /locus_tag="PTC28_001261"
     CDS             complement(15539..16354)
                     /locus_tag="PTC28_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase/pyrophosphorylase"
                     /protein_id="HDK5716553.1"
                     /translation="MTTTPQLTIFIISDSLGETAQRMVHAVMSQFPKLTQIEMKKFSL
                     IESEEALLNVLKLAKERQAIVVTTLVTDHFNALGQAYASEHEIPYIDYMSPLMQHVQA
                     ATGHVPVKEKGKIRELDEDYFKRIDAIEYAVKYDDGKHFTDIEEADVLIVGVSRTSKT
                     PLSMYLANKGYRVANIPLVPEIGIPYDIVKDKKLKVIGLTASPEYIMSIRTERVKVLG
                     MKGKQAYYNDLQRIKAELAYAEEVFKQLNATVINTEYRSIEESAFYIEKILQK"
     gene            complement(16356..18980)
                     /locus_tag="PTC28_001262"
     CDS             complement(16356..18980)
                     /locus_tag="PTC28_001262"
                     /EC_number="2.7.9.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HDK5716554.1"
                     /translation="MTKYVYAFDEGQKNMKDLLGGKGANLSEMKRLGLPVPDGFTITT
                     AACIEYLERGDQLSDEVKTQLQEQLEAFSGRANKAFSSDENLLLVSVRSGAKISMPGM
                     MDTILNLGLNDENVEKLARKTNDARFAYDCYRRLLQMFGEVVYGIPMTAFDTYFDNYK
                     ATHGYQNDADIPAEGLQEICEHFKTVYIEEVYKPFPQNPLDQLLEAIEAVFKSWDNDR
                     ARVYRDLNDIPHHIGTAVNVQEMVFGNSGPQSGTGVAFTRNPVTGEAKLFGEYLLNAQ
                     GEDVVAGIRTPQDIATLHDQMPHVHEQFVAVADQLEQHYQDMQDIEFTIENEKLYILQ
                     TRNGKRTAKAAMQIAVDLVEEGVISKKDAMTKVDVKSIDTLLHPTFEAQALEAATIIS
                     KAGLPASPGAATGKIVFSAEEAKRQAEAGEKVILMRPETSPEDIEGMIASEAIVTTHG
                     GMTSHAAVVARGMGKCCVTGCADLEINTREKTVTYANGQLFEGDEISVDGAQGDIYAG
                     IVETTSAEHSEAFEQFMQWTEEIARLGVRMNAETTPDIEAGYQFNAQGIGLVRTEHMF
                     FGAERLVEMRRFILSSDDETRTQALNRIRTYQTEDFEQIFRLSGERPTIVRLLDPPLH
                     EFLPKSDEEVDSVAKQLNISVAQLKQRIAELHETNPMLGHRGCRLAITYPELYVMQVE
                     AMMKSVAQLKEEGITCHPEIMVPLVSTVAEFKVLKAQILDAIQQIETDTNQSLHYLVG
                     TMIETPRACVIAGDLAKECDFFSFGTNDLTQLTFGFSRDDAGKFINDYLNQHILAADP
                     FQTLDVDGVGELVRNVSEQAKAANPNIKIGVCGELGGDPKSIHHFNRMAIDYVSCSPF
                     RVPGAKLAAAQSVVESEG"
     gene            19108..19407
                     /locus_tag="PTC28_001263"
                     /pseudo
     CDS             19108..19407
                     /locus_tag="PTC28_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166908.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
BASE COUNT         5769 a         4140 c         3772 g         6099 t
ORIGIN      
        1 cggatatttc ttttatttat ctttcgtaat tgtaaaatat ttgaccactt catcattgtt
       61 tatggaagta aacttatgca tcacgataaa gcttgatacg acctttttaa cattacaagg
      121 tgcgatttcg gtcgttaaaa acttatgcca aaaaataata ccaagatgat taaaggtgtc
      181 aaaacaaata tattaagtaa attgatgata aaccaaatta agcctacttt ttgtaacttc
      241 gcatcgtctg cgtttaggtg ccacaatgaa aatatgcccg cagctaatga cgttgcctca
      301 aaatataata ataaatcacc aaacgctaac atcaattgca cacaaatcag tccacctact
      361 attaaaaata agtaattcaa aacattcacg atatacacga ctctgatcct attcatttat
      421 cacgactcct gttgaaagtc cttaatatgg tttttcatca tactataaac ctaggaaaca
      481 attctgtaac ttatcaaaat tataacattt tcatatgatt gtgattatat atattagttt
      541 catacttata aaaaagtgcg tgcatgaaga taggacataa aactttttgg cgctactgct
      601 accgcattgg tttaacttgt acgcttccag gacttgtctt aactaaatcc agtgtccacg
      661 agggccattt tcatttgttg cgtatatcaa aaaagtcatg ccatgttcaa aacgagacat
      721 ggcatgacgc tgtcgaatgt gattgatttt ataaacgaaa ttcataagga tttgaggaag
      781 actttaactt tggtactagc tactgtttaa cgcagtagct gtctgacttc tcaatgcttg
      841 tacttgtgag aagccgagtc agccttgcgc aggcatttac gacgaaattt ttgttgcaca
      901 agaggtttct gtacgactcc ctcaacccca tgtcacttac aattgatcaa gtgcttgttt
      961 taaatcttct acaagatcat ctgtatcttc aatacccaat gataatctga ttaaaccatc
     1021 tgcaatgcct tcttttgcac gaatatcagc cggaatcgat gcatgtgtca ttaagcttgg
     1081 tacagaaatt aaactttcga ctgcacctaa actttctgcg agtgtgaaat attttgtttg
     1141 tctcactagg aatttcgctt tttctacatc tgctacttca aatgagatga tgcctgttgt
     1201 gccatctgct tgcgcttgat gcacgtcgta gtttaaatgt gacggttggc ttgggtgata
     1261 cactttcgtc actttgtcat gttgattcaa catttcgacg accgctaatg cattacgttc
     1321 gatttgttcc atacgtaaag ctaatgtttt catcccgcga ataagcaagt agctatcttg
     1381 aggccctaat acgccccctg ttgagttttg gacgaaagca atgcgctctg cgagtgtttc
     1441 gtctttaact gcgacaagtc cggctacaac gtcactatgc ccacctaaat atttcgtcgc
     1501 tgaatgtaca acaatatctg cgccaagaga caacggtgtt tgataatatg gcgtcataaa
     1561 tgtgttatcc acgacagtca tgagttcgtg ttgcttgccg atttcactca ccgcttggat
     1621 atctgtaatg cgcagcaatg gattagatgg cgtttcgata aataacattt tcgtattatc
     1681 tttaatctta tcttcaatat tttgaacatc tgtcgtgtta acaaagtcaa attcaatacc
     1741 aaaacgtgtg aagacacgtg tcattgcacg ataagagccg ccatacacat cagagccaac
     1801 aataatgtgg tcgccttggt ctaataacat gataactgcg ctgatggccg ccatgcctga
     1861 accgaatgcg aaaccgtagt tcccatgctc taaatcagca atgacagact cgagcgatga
     1921 acgtgtgggg ttcgctgtac gtgagtattc aaacccttgt cttaactccc caatcgcatc
     1981 ttgttcatac gtactcgttt gataaatcgg cgtcgtcact gcacctgtat aatcatctgt
     2041 agtattaccg caatgaatta ataatgtttt tttattcatt taaatctcct ccgtattgaa
     2101 atatcttttt cgacatataa cgatcactgc catcaggaaa aatagctacg actgttcctt
     2161 gttctaaacg ggacgctgct cgaatcgcgc cttccaatgc agcacctgaa gaactacccg
     2221 ctaatatacc ttcgtaacgt gccaagtctt tcacgtgttg aaatgcgacc tcatccggta
     2281 ccacttcgac cgcttcgatc cattctcgtt ttaaaaattg tggccacacc tctacgccaa
     2341 tgccttcagt atcatggcgc cctttttctt gaccacttag aatagaacca ggtggctcaa
     2401 cgacaattga tttcacatca tggggttgga gtgcttctgc cacacctgca aatgtgccac
     2461 ccgaacctgc acccgcaaca aagtagtcta aatccggaag tgcctcaatg agttcaactg
     2521 ctaatgtatc acggtacgct gctggattat tgcgcgtttc aaactgattc gtataaaaag
     2581 cacctgtctc atcagcatag ctttcggccc attgtcgtgc accgagcatc ccttctgctt
     2641 gtggtgtacg atgaatctca gcgccaagtg cccgcataat cgaaatcttc tcttctgaaa
     2701 aaccttctgg cgcaaaaatg atacatttaa tgtcataatg attcgcaaca atcgctagcc
     2761 cgatacctgt attgcctgct gttgcttcca caatttgatc accggggtgg agccgaccat
     2821 cttccatcgc acgctcgatt aaatacttgg ccaatcgatc tttcacactg ccccctggat
     2881 tgtgcatctc cagtttggcg aagatttgca cccggtctgt actgtaatgc tcgagttgta
     2941 caagcggtgt ccggccaatc aagtcaaaat ttctcaacac tgtcccctca tttcaaccgt
     3001 ttaattctta gttaatacat atgaattata agataaatat gtgtcggttt caatgttaat
     3061 cgctataaaa atacaaatta tctctaaagc aatcgatatg gtacgataca attgcaaatg
     3121 agcgattaaa ttttgaggtg ctcattaata acgtcttcac tttatcctta cacattgcca
     3181 tcccatacaa gaaagccgtg cttacgctat aatgaaagca atcacacact acatttcaga
     3241 gtacaaagga gagagattga tggaactgca tacacctaaa ggcacgattc acggtgaacg
     3301 tcatactggt tatgaagtat ttaaaggtat tccttatgcg caaccacctg ttggggcatt
     3361 acgttttaaa catgcgcaac tgctgttaac gtggccgaaa gattttcaag cgacttcatt
     3421 tggacctgtc ccaattcagc caccgaattc attagagtcc ttttttgata cacacgtgca
     3481 agactacccg cagagtgaag actgtctcac tttaaatatt tggcgtcctg caacacccgc
     3541 tcaccaacca ttgcctgtca tcgtgttcat atatggtggc agttttgtga atggtcatag
     3601 tgcacaagcg ttgtatcacc ctcatgaaat cgtcaaccgc gaatccgtca tcgtcgttac
     3661 gttgaattac cgtttaggtg cactgggttt cttagactgg tctacaatca atccggagtg
     3721 ggatgcgaat aatggcttgt cagatcaaat ttgtgcacta caatggatac gtgaaaacat
     3781 cgcacatttt ggtggggacc cagagcacct caccttgatg ggtcaatctg cgggtgcgat
     3841 gagtgttgcg gccatgttgc gtatgccaac agtacggcct tggattaaaa atgccgtcat
     3901 gttaagcggg actttgcatt tggaatctcc tcaagtcgca tccgataaag cagacgcctt
     3961 tgcagcatta aaggcacaac actatgcttc cacaccttgg catgaacttg atgcacaagg
     4021 gatattggca ttaatggcga gacaccaaat gcagtatggc ccatcgaaag gtttagaatt
     4081 gttgtatcaa ccggttgcca cagatgatat cgaactagac tatcgccatg tcaatgttcc
     4141 cgtattatta ggccatacga cagctgaggg tgacatttat attaaaaatg aacaaaaaaa
     4201 attagccccg caacaattcc aacgtgtcat tcaacgttta gaagggcccg tgccaccgct
     4261 agaggacatc gaaactgctc aacaacagcg tgacctgatt acgaattggc atttcaaagc
     4321 accgtttcaa caactgtatc aagcattatc agcagtgaca ccgacttggc aggtgacttt
     4381 caattggtct cgtggcgatc atccagacta tgcttcggcg tatcacattt tagatatgat
     4441 tttttggatg ggccgtctcg acattttagc agcacacggt ttggaagtaa ctgcacgaga
     4501 gaccgaacta cgcaaacgga tgattcatga tttgtgccat ttcgcccaac atagcacatt
     4561 agatggcaat cgcttttatg aataatgtga cgcccaaaat aaataaggaa gcgactcggg
     4621 aacaattgac gttttcccag tcacttcctc tttattttta tgtgtagtaa tcaatctttg
     4681 gaagccatca aacatgcgta tcactgtatc gattcaacat gaatgaaatg cttgttatac
     4741 taattgcaaa atgaaaacca ataaaatgac aaccggtaaa atgtatcgaa tgaaaatgta
     4801 ccatatcgca aacaatttca gagggtcgtt accaaaacct gtttttaaac gcaccttttc
     4861 catcgcataa ccaatcgcta gcgttgaagc taaggcgccg ataggtaata aaatattcga
     4921 aaaaacaaaa tccatattat caaaaattga accggcacca aattggatgt ggctgagtgg
     4981 cccaaatgat aatgtagcag gtacaccaac gatgaatacg gctaaactga tgatcaatgc
     5041 catcgttgga cgtttgcggt tattattacg tgtgaagttc gacacgttca gttctagtag
     5101 tgaaatagaa gatgtgagcg ctgcaaataa aaagagcact aagaaaatcg cataaaacaa
     5161 tgtgccgaac tgtatttttt caaaaacgag tggcaaaatg ataaacaata agccaggtcc
     5221 ttctttcgct tggtagccga acgtttctaa tgccgggaaa atcgctaagc ccgctaagat
     5281 cgcaatggca atattcatga ttaaaatcgt caatgctgac gttttaatcg gcatgtctgt
     5341 tgaagcgtaa ctcgcatatg tcatcatccc tgtcgtcccg agtgatagtg caaaaaagga
     5401 ctgtcctaaa gcgaataaca tagactccat attgatttca gagacacgcg gttggaataa
     5461 gaaacgtacc ccatccatag ccccatcaag cgataatgtt ttcactacga tgatgattaa
     5521 aaagactaat aataagggca tcattaattt cgacgctttt tccaaccctt gttgcacgcc
     5581 acgcatgaca ataccacatg ttaatgcaat aaaaatcgcc tgccccgtaa caacatagag
     5641 cggttgacta ataatagctt gaaattgcaa atcgtgaaga tgtgtcggca caatgtggaa
     5701 cagttgcgca aggacaaagc cgaaatagac aataatccaa ccgccgatca cactgtaaaa
     5761 actaaacaac acaaacaccg ctaaattacc aatccatgcg atgccattta accatttgcg
     5821 ccctgttaac tgaccaaata attctgttgt atacgtgcga ccaagttgac cgactgcaaa
     5881 ctccataatc agtaacggta gacctactaa aatcgtaaag gctaaaaaca taaataaaaa
     5941 tgcgccacca ccgaacatcc ccgccatata aggaaatttc catagtgcac ctagaccaat
     6001 cgcagaaccg gcactcgcta aaataaagcc ggttgacgat ttccattgtg accgttgcga
     6061 caaaaccgtt catcctctct ttttctacgc tttaatacgt tgaatcgttt aagtcatctt
     6121 gcaatataac acattcataa gttatcgaca atgaaagaac acttttttat agtatttcat
     6181 caaaagttta gtattgaaac gatgttgtat tttgttatga ttaagttgta aaagaggtga
     6241 gaagtcatgt cgcaaaaatt aaaagaacgt atttatttaa ttgccatcat tgtgagtacg
     6301 ctatgtgtct tgtcgtctgt gctgtttggt ttaagtccaa caatcacagc aaccgttacg
     6361 tttatctcca ttatcgtctt tgcgattctt tattttgtcg tgcctaataa acaacagaat
     6421 cgcaaattaa ggtagcaaaa tgggggatga gacaagccca acacatcgaa atttacgtac
     6481 tataataggt tcattttcag tatctttatt tttttaaaca gacaggtaga ggctggggca
     6541 ttatgttttc cccaacctct ttcctactcg cttatttatg atttaatgat tataaaacag
     6601 tcaaaaacat tgtttttcaa cataacttta ttgccaatat tgcatttgat aaccgatgcg
     6661 aggccgcgta ataatgagtt gtttcgactc gggatgggct tgtgtcagtt tattgcgcaa
     6721 cgacgtcata tgtacgcgca agctcggcat ttctgattga ttcacataac cataaattgc
     6781 tttaagtatc gtatcatacg taagcacttt acctacgtga cggcacaata attctaataa
     6841 agcaaattcg tgcggcgtca aattgagcaa ttgattatca atttgggccg ttttagcttg
     6901 atacgatacg actaaagggc cattttcaaa gacaatttct ttttgattct gcatattctc
     6961 caaccgttgc accactctaa tacgtgcgcg taattcatcc acattgaatg gtttggtcat
     7021 gtaatcattt gcaccgttat ccaatgcctc aacaattgtt tgttcatcca atcgtgcact
     7081 gatcacaata ataggaatat cgaaagtttg ccgtatcctt ttaatcaatt ctaaaccgtc
     7141 gatatcgggt aaccctaaat ctaataaaat gatgtctggt gctttagaac gtatttgaaa
     7201 atcagcatcc tttccatttg tcgcagtgat gacttcataa taatcaaggg ttaatgagac
     7261 atcgagcaaa tgggtaattg ccgcatcatc ttctaccact aatatttttg tgttcacggc
     7321 acttcactcc tcaatttgta tttttttcaa aaggtaagtt gaaataaaat atactcccat
     7381 gcggctcatt ttgtcgatat tttaattgac tgtcatgctt ttgtagaatc gcctgcacga
     7441 gataaagtcc gagtcccata ctatctttct tgttatcttt gaaaagttga tgtttctcaa
     7501 aaggttggaa aatcgtttgt tgttcttcat ccgacaatcc cggtccccta tcgattacct
     7561 caaataatat gtggggttca tttttattga ttcttaacgt aataggtgtt tcaggtggcg
     7621 tatgttttaa cgcgttttca atcaaattaa aaaccgcttg taaaatgagc tgactatcaa
     7681 tatcgacgaa gcatatctca tgtaatgccg acactttcac ttgcttgttg agccgtctac
     7741 gttcaagcac ggattcgatt tcttcaacta attcttcaat gagatacagt tggcggttga
     7801 gcttcatatt cgaatgctcg agtctggtaa gtgacaaaat attggaaacg agcatgtgta
     7861 aatactgggc ttcgtcaaac gaccgggaaa ctaactgctg ttgttctgcg cgaggcattt
     7921 ctttcccatt gagtaataag acgtccaaat taccgatgat agaagttagt ggtgtgcgaa
     7981 tatcatgaga aatggagcgt aaaaagtggg cacgtgccac ctcccgctca gctcgtaaca
     8041 tcgactctcg tgtttgacga agtaagctca agttctctac agcaagcgac atttcattca
     8101 acatggactc taaaatagaa ttgtcatagg aatcaataat ttgcgcttca gaaaagtgta
     8161 tggaaacgat tgctttaaca ggttttgtgc caatcggtat gagcaaatag tgaatacctg
     8221 gaaatgtatc cgttgttgct cctgcacgct tttggttttt aatgatccaa cttagcgctt
     8281 gttggtggcg agaatcatta gtctgtggcc cttcaaccgg tatcgttttt gaaatttttt
     8341 catcttccac taaataaatc gtaacttctt gctttaacag atgttgaatt tgatgtcttg
     8401 cattcactaa taaatcagga atcgtgtacg tttgtttaat tgaatcatta aactgcaaca
     8461 aaatatcggt ccggtacaat tgatgtttcg tgacgatgta ctgatgctta atttgtttta
     8521 ataagccact cgtgacgata ctcacgataa tactgatcgt gaaagtgata ggatagtcaa
     8581 agcgataaac ctcaaacgta aatcttggca cagtaaaaaa gaaattaaac accaacacgt
     8641 ttaaaatcgc agcgaaaaaa ccgattaaat acgattgcgt ccacatactt aaaacgacaa
     8701 tacctaataa aaataacagt agaatgattg tatcttgttc tcctttgcct gtgctataaa
     8761 tccacaagcc taacagtacg caaatcgctt gaatcgcaat cattttaaaa atatcgacag
     8821 tccaacgctt ttgttgcata tgttgatgtt gtcgctcagg ctttgctttc atttgaatat
     8881 gtttaatcgg cacaatttca attttataat gatgttttaa atcaagtaat tggtcaatta
     8941 aaggccgctt caaccgtgta tgccatttat cattcatatg ttgaccgata acgagtttcg
     9001 tcactttttg ggatttacac caatcatcga gacccgatgc aatttgatta tcatatatca
     9061 ctttgacgga tgcccctaac gactgcgcca gcattaaatt ttggtgcact tgactattat
     9121 ttgcatactg tttgccttca tgatcaaaca cgtcaatata caccgctgta aattgagcat
     9181 gctcacggtt cgcaatgcga cgtgcctctc gaatgacggt ttcattgctg atacttccac
     9241 tgatagcaac tgcgacatgc ggggtaatat ctgtattttt cttataaaga tgctcttttt
     9301 gactcatcat atcagcggct gttctcaatg ttaattctcg taattcagta aggttctcat
     9361 atgtaaaaaa atgcgaaaat gctgtgtcga gtcgttcctt tttatacact tttcctgctt
     9421 taagtcggtt gatgagttgc tttggtgaaa tatcaatgac ctctattgca tcactcgaca
     9481 taatgaattg gtcaggcaca cgctctttaa ttttgacccc cgtcagtaac gccacttgtt
     9541 cactcaaact ttcgatgtgc tgaatattta atgttgtatg aacatcaatg ccgtgggaaa
     9601 gtatttcttc aatatccatg tacctttttt catgtcgctc ttttgaaatg ttggtatgcg
     9661 ctaattcatc gatgaggacc acatctgggt cgtcttcaat aatttgatca acatctaaat
     9721 agtggaatgt atggctgcca tgatttttag attttgtttg aataactggc aattgttcag
     9781 caagggcttg agtttcttta cgttgatgtg gctcgatata accaatttta atatccgcac
     9841 cttcgtgata agcatcgatc gcattggata acatttcata agttttacct acacccggag
     9901 aataacccaa atatatcgtt aatgctcctc tttttatcgt tagatgacgc tccatattct
     9961 tcacctcttc tcactcatca taaacttcaa atcttacatt ttctataaaa aaatacgctt
    10021 ttatttatct taataacttc ttaataaaac aacgcaaata ttaataatcc ccttatagaa
    10081 atttttatat aatgatttcg gcaataagga ggaggtccac agatgattag catattaggt
    10141 ttgatcgtca tcgtattaat cggctattta atttatgcct taatttacag tgaaaagttt
    10201 taaattcagc tattgatgga gggaaaacat ggaaatcgtt atctttttaa tcaccttttt
    10261 tctatgcgca tttttattaa gtcgttattt atacagcgtg gcgttattaa cacctacacc
    10321 cgcagacaaa gtattttcag gtgttgaaaa aggcatttat aaagttttag ggacgcaact
    10381 agagcatatg tcgggtaaga cttacctcaa acattttcta ttgtttaatg gactaatggg
    10441 cgcgttgacg ttcgtactgc tactcattca acaatggctc tttttaaatc ctaaccataa
    10501 tttaaatcaa tctgtgtcat tagcatttaa cacagccgtg tcgttcttaa cgaatacgaa
    10561 cttgcaacat tacgctggtg aatccggtct aacctatttg acacaaatga tggtcatcac
    10621 ttatttgatg tttacgtcta gcgcttcagg ttacgcggtt tgtattgcaa tgttacgccg
    10681 tttaacagga atgacagata tcatcggtaa cttttatcaa gatatggtgc gctttttagt
    10741 ccgtgtttcc atacctttgt cattcattgt aagtctcctg ttaatcagtc aagggacacc
    10801 gcaaacttta aaagggaact taacattgca tacgattaca ggaaaagttc aacatatcgc
    10861 atatggtcct atggcatctt tagagtccat taagcatatc ggtacaaatg gtggtggttt
    10921 tttaggtgcg aactctgcca caccttttga aaatccgact gtatggtcta actatatcga
    10981 aatgttgagt atgatgttaa ttccgggtgc actcgtcttt ctattcggac gaatgttgac
    11041 caaaaacggc aaacacattc atgcgcatgc ttatgtcatc ttcggaacta tgctgctctt
    11101 tttcttagtg tgctttgtca tcgcattgat tgcagagtac aaaggcaatg tcgtgttggc
    11161 tcatttaggt gttattggcc cgaacatgga agggaaagaa gtccgatttg gtccaggtct
    11221 gtcagcatta tttacagcga tcacgacagc atttacgacc ggtacagtca ataatatgca
    11281 tgacacactc accccaattg gtggtctcgt acctatcgtg ctcatgatgc tgaatgccat
    11341 tttcggtggt gaaggtgtcg ggttaatgaa tatgctcatt tacgttttat tgactgtctt
    11401 tatttgtagt ttgatggtcg gcaaaacacc gcattattta gggatgaaaa tagaaggtcg
    11461 cgaaatgaag ctgattgcgt tgaccttttt aattcatccg gtattaattt taatcgcaac
    11521 agccttggct tttatcgttc ctggtgcgag tgcggcaatc accaaccctt catttcacgg
    11581 tatttcacaa gtactttacg aaatgagctc atctgcagcg aataatggtt ctggctttga
    11641 aggtttaagc gataatacag cattttggaa catctcgaca ggtatcgtca tgttgcttgc
    11701 acgctatacc cctatcattt tacaagtgat gattgcttca agtttggtga ataaaaaagc
    11761 ctatcaaaaa agtgatcaaa cgattgcgat cgacaaacct ttcttcgggg tatcactcac
    11821 gatttttata attttgttga gtggtttgac atttttacct gtgttattac ttggaccgat
    11881 tggcgaattt ttatcattaa aataaaggag actgtgttga atgaaacaat catctcatgt
    11941 gttgaatagc gcgattgtca gacaagccat caaagaaagt tttattaaat taaaccctgt
    12001 atctctcatt aaaaatccaa ttatgtttgt cgtagaggtg gggatggttt taacgttaat
    12061 tatgacaatc gtgccacaaa tttttacaga tggcgcgatg tcacgacttt atttatttac
    12121 gattttcatc attttattct ttaccgtgct cttttctaac ttttcagaag cgattgcaga
    12181 aggtcgcggt aaagcacagg ccaacagtct tcgagaaaca aagtctcata tgattgcacg
    12241 tcgcatagtc aacgctgaag tatacgaaac ggttgatgcg tcagctttaa aacgaggtga
    12301 ccgtattctc gtaaaatcag gtgaaatgat tccgtcagac ggcaccatta ttaaagggat
    12361 tgccacagtt gatgaatctg ctattaccgg agagtctgcc cctgttataa aagaatcagg
    12421 tggcgatttt tcgggtgtca ttggtggaac aactgtgacg tcggactggc tcattattga
    12481 agtagacagt gaagaaggtg cgacattttt agataaaatg attgccctag ttgaaggggc
    12541 ccaacgtaaa aaaacaccaa acgaaattgc gctgtttaca ttgctaatga cattaacgat
    12601 tatttttctc gttgtcattt taacgttgta tcccattgcc caatatttaa atctgaatgt
    12661 ccctatcaca tcattgattg cattgacagt ttgtttaatt ccaacaacga tcgggggatt
    12721 actttctgcc attgggattg ccggtatgga ccgtgttaca caatttaata ttttggcgaa
    12781 aagtggacgc gcgattgaaa cgtgtggcga tgtcgatgtc ttaattttag ataaaacagg
    12841 cacaatcacg tacggtaatc gtttagcgga atccttactg cctgttcggg aggaatggta
    12901 tgacagatta ctcgtcgcag cgtatgaaag ttccgttgaa gatgatacac ctgaaggcaa
    12961 aagtatcgtc actttagcca aacgttcatc cgtacagttg ccagaggagg tcaaaggaga
    13021 ttatcgacca ttcaaagcag aaacacgtat gagtggtatc attatcggcg aacgttcagt
    13081 ctttaaaggg gcacctaata gtatgttgaa atatgtgaaa caacaaggtg gggtgattcc
    13141 ttccaatatc gaagcactcg ttactgaagt ctctagtaaa ggcggcacac cgttaattgt
    13201 cgttgaaaac caaacgatct taggcgtgat ctatttaaaa gatgtcatta aaaaaggctt
    13261 ggtggaacgt ttccaagagt tgcgtcaaat gggcatcgaa acggtgatgt gtaccggtga
    13321 caacgaattg actgccgcta caattgcaaa agaagccagt gtcgaccgtt ttatcgccga
    13381 atgtaaaccg gaagataaaa tcaaagtcat taaagaagaa caagaaaaag gccacattgt
    13441 tgcgatgaca ggtgatggaa cgaatgacgc ccctgctctt gcccaagcga atgtcggcct
    13501 agcgatgaat tcagggacat taagcgcaaa agaagccgca aacttaattg atttagattc
    13561 caatccaacg aaattaatgg aagtcgtcaa aatcggtaaa cagttgctca tgacgagggg
    13621 cgcattgaca acatttagta ttgcgaatga tattgccaaa tattttgcca ttttacctgc
    13681 tatgatgatg gtcacgatac ctgaaatgag tcgcttaaat attatgcagt tacattcccc
    13741 tgaatctgcc attatttcag cactcatctt taatgcactc attattgcat tgctgattcc
    13801 tattgcgatg aaaggggtgc gcattaaagg ggcgtcgact gaaacggtat tgatgaaaaa
    13861 tatgttggtc tatggactcg gcgggatgat tgtccctttt attggcatta aattaatcga
    13921 tcttttaatt caatggtggc tataggagga tgcatatgaa aacgataaga agtagtatag
    13981 gactcgttgt aatgacaatg attttatgcg gtctcatctt tccactggct gttactgcag
    14041 ttgggcagac attgtttcat catcaagcga acggtagcct tgtgacacag aacaatcaaa
    14101 ttgtcggctc cgagttaatc ggtcaacaat gggatgaacc tcaatacttt catggccgtg
    14161 taagcgctgt aaaatataat atggatgccg ccatgatcaa aggaaacggg gtcgcttctg
    14221 gtagtcataa ctattctaat gggcatcctg aacttcaaca gagagtggca gctttaaaac
    14281 aaataaacgg ccatacacct atcgatgccg ttacagagtc aggttcaggt ttagacccgg
    14341 atattactgt agacaacgcg aaacaacaag tcgcgcgcat cgcagaacac agaaacctgt
    14401 caacagaaca aatcaatcaa ctcatttcga accaagccca tcaaggtact ttgtatgatg
    14461 atgatgtcaa tgtgttagca ttaaatcttg ccttagatcg catgtcaggt cattagtttt
    14521 taggtggttg cgtagataca aacgaaacat ctcgttcaca taccgtcgga gaaacaatga
    14581 gataagttgt ggaggaatct gtgacactag attgcttcac aactttttat atttagctat
    14641 aggacgcttc aaaaacttcc tctaaatcgt gttgtgcctg ttgtaatacc gcttctttac
    14701 ttaatttagc tgtaccttga gcgcgaacaa tgtaatagtc atcaaatgct atcatttctt
    14761 taaacatcgc ttttaaatat tgaggcgcaa aatctaaagg ttgatagcga tcttcgttag
    14821 tataaatgga accgatcgcc tggatatata gcgctttata attatcagtc attaacccta
    14881 ctgaaccgtc agacgtatat ttgaaagttt gacgcactat caaaatgtta tcaatataat
    14941 cttttaaacg tgatgtaaca ttaaaattgt gcagtggcga aatgatgaca atgcggtgat
    15001 gtgatttgaa ttgtgaaagc aaggctgcat taatctgagc gaggcgttgt tcttctgctg
    15061 tcattgtttc acctgaagat tgcttatccc aaacattaag caactgcgcc atttcaatac
    15121 gggggtaatt caatatcata ttaaatttag aatatccggt gtatcatttg ggaattcatc
    15181 gttgtatttt tttagaaaca tggcttgcat ttgattggca aagctgtcct tgttgttgca
    15241 cctcggatgt gcgttaatga ttaacgtttt cataattgat gctcctcttt ttttgggtga
    15301 gacgagtata gtaatgatag ttttcaaaat atatctttta aattaataca taaaacccct
    15361 ctttcaaaac gatttatctc ttcattatac tcacttgatc ttggcgaaaa gcaaaaagac
    15421 tgagatatga tcccagcctt tatgattaca atgcattgct gttcatgaga caccaataat
    15481 tcaatgtgct tgattgactt catatcgaaa gcttgtcctt attcacatca tcaaaccgct
    15541 atttttgtaa aatcttttca atataaaatg cagattcttc aattgaacga tattctgtat
    15601 taatgactgt cgcattgagc tgtttaaaaa cctcttccgc ataggcgagt tctgctttaa
    15661 tgcgctgtaa atcattgtaa tacgcttgtt tccctttcat accgagcact ttcacacgct
    15721 ctgttcgaat gctcataata tattcagggc ttgcggtgag accgatgact ttcaattttt
    15781 tgtcttttac gatgtcataa gggatgccga tttcaggcac taacggaata ttagcgaccc
    15841 tgtatccttt gttcgctaaa tacatactta aaggtgtttt agatgttcta gaaacaccga
    15901 caataaggac gtccgcttct tcaatatctg taaaatgttt gccatcatca tatttgactg
    15961 catattctat cgcgtcaatc cgtttgaaat agtcttcatc taactcacgt atttttcctt
    16021 tttccttcac aggcacatga cccgttgcgg cttgaacatg ctgcatgagt ggtgacatgt
    16081 aatcaatgta tggtatttca tgttccgaag cgtacgcttg ccccaatgca ttgaaatgat
    16141 ccgtcactaa cgttgtcacg acgatggctt gccgttcttt ggcgagtttt agtacgttaa
    16201 ggagcgcttc ctcactttca atcaatgaaa atttcttcat ttctatctgt gtcagcttcg
    16261 gaaattgact catcaccgca tgcaccatac gttgtgcggt ctcacctaat gaatctgata
    16321 tgataaaaat ggtcaattgc ggtgttgttg tcatattatc cctcactttc aacgacactt
    16381 tgtgctgccg ctaacttggc acctggtaca cggaatggcg aacatgacac ataatcaatc
    16441 gccatacggt taaagtggtg gatggatttc gggtccccgc cgagctcacc acagacaccg
    16501 attttaatat taggatttgc ggcttttgct tgttctgaca cattacgaac gagttcaccc
    16561 acgccatcca catctaaagt ttggaatgga tcagctgcta aaatatgttg gttcaaatag
    16621 tcattaataa attttccggc atcatcacga gaaaagccga aagtcagttg tgttaaatcg
    16681 ttcgtaccaa agctgaagaa gtcgcactct ttcgcaaggt cacccgcaat cacacaagcg
    16741 cgcggtgttt caatcatcgt ccctactaaa taatggagtg attggttcgt gtctgtctca
    16801 atttgctgaa tcgcatccag aatttgtgct tttaatactt taaactctgc cacagtagaa
    16861 acgagcggca ccataatttc tggatgacat gtgataccct cttctttcaa ttgtgccaca
    16921 ctcttcatca tcgcttcgac ttgcataaca tacaattctg gatatgtgat cgcgagacga
    16981 caaccacggt ggcctaacat agggttcgtt tcatgcaatt ctgctatgcg ttgtttcaac
    17041 tgtgccactg aaatgtttaa ctgctttgcg acactgtcaa cttcttcgtc agatttcggt
    17101 aaaaattcat gaagcggtgg atcgagtaaa cgcacaatcg ttggacgttc gcctgataaa
    17161 cggaaaattt gttcaaaatc ttctgtttga tatgtgcgaa tacggtttaa agcttgtgtt
    17221 cgcgtctcat cgtctgaaga taaaatgaat cgacgcattt ctactaatcg ttctgcaccg
    17281 aaaaacatat gttctgtacg gacaaggcca ataccttgcg cattgaactg ataacccgct
    17341 tcaatatcag gcgtcgtttc cgcattcata cgaacaccta gacgcgcaat ctcttccgtc
    17401 cattgcataa attgttcgaa cgcctcgcta tgttctgcac ttgtcgtttc cacgatacct
    17461 gcataaatgt caccttgtgc gccgtcgaca gaaatttcat ccccttcaaa taactgacca
    17521 ttcgcataag tcactgtttt ctcacgtgta ttaatttcaa ggtccgcaca gcctgtcaca
    17581 caacatttcc ccatgccacg cgcgactaca gccgcatgcg acgtcattcc accgtgtgtc
    17641 gttacgatgg cttcactcgc aatcatccct tcaatatctt ccggtgacgt ttctggacgc
    17701 attaaaatga ctttttcgcc cgcctcagct tgacgtttcg cttcttctgc tgaaaacaca
    17761 attttacccg tcgccgcacc tggactcgct ggtaaacctg ccttcgaaat gattgtcgcc
    17821 gcttctaacg cttgtgcttc aaatgttgga tgtaataacg tatcaatgga tttcacgtcc
    17881 actttagtca tcgcatcttt tttcgaaatg acgccctctt cgactaaatc aaccgcaatt
    17941 tgcatcgccg ctttcgctgt acgtttacca ttacgcgttt gcagaatata aagcttttca
    18001 ttttcaatcg taaattcaat atcttgcata tcttgataat gttgttcgag ttggtccgcc
    18061 acagccacaa attgttcatg gacgtgtggc atttggtcgt gtaatgtcgc aatatcttgg
    18121 ggcgtacgaa tccctgcgac cacatcttcc ccttgtgcgt tcaacaaata ttcaccaaat
    18181 agtttcgctt cacctgtgac aggattgcgc gtaaaagcaa ctcccgttcc actttgcggt
    18241 ccactatttc cgaacaccat ttcttgtaca ttcacagctg ttccaatatg atgtggaatg
    18301 tcattcaggt cacgatacac acgtgcacgg tcattatccc aagatttgaa gactgcctca
    18361 attgcttcta acaactgatc aagtgggttt tgtgggaatg gtttatacac ttcttcaata
    18421 taaactgttt taaagtgttc acaaatttct tgtaaccctt cagctggaat atccgcatca
    18481 ttttgataac cgtgcgttgc tttgtagtta tcgaagtatg tatcaaatgc agtcatcgga
    18541 atcccgtaca cgacttcccc aaacatttgt aagagacgac gataacaatc ataagcaaaa
    18601 cgtgcatcat tcgttttacg tgcgagtttt tcaacatttt catcattcaa gcctaaattt
    18661 aaaatcgtat ccatcatgcc cggcatcgaa attttagccc cactacgaac tgaaacaagt
    18721 aacaggtttt catctgaaga aaatgcttta ttcgcacgcc ctgaaaacgc ctccaattgt
    18781 tcttgtaact gtgttttcac ttcatctgac aactggtcac cacgctctaa atattcaata
    18841 catgcggctg tcgttatcgt gaagccatca ggaactggta aacctaaacg cttcatttct
    18901 gataaattgg cccctttgcc accgagtaaa tctttcatat ttttctgacc ttcatcaaat
    18961 gcataaacat attttgtcat actgagcacc tctatctttt taatatgcca tactaattaa
    19021 ataaaagtat gtcatattaa tccgaaattg acaatcaaaa atagctgtat tcattaattt
    19081 ttttatttac tgtcaataat ttgtcataaa gaaggccatg tccaattatc aaagggtatc
    19141 atatcttacg tccatattga tggcaccgtt gaagcagcaa tcaaaacgct cgatttcgaa
    19201 ccaggtattt ataacgtgac agatgacgag tcgattgatg gcgaaacatg ggctacttgg
    19261 tatgccgaac aactgaacgt ttctcctcat attgaatttt tcaaagcgca atcattcgaa
    19321 cgtggcgcgg acaatcgaaa atacaaagca caagatggca cattgttata ttcaacttgg
    19381 cgcgatggta tgaatgtaaa cgaataaata accgtaacgg aaagcatact tcaaatggtg
    19441 cttttcgttt tttatttgaa tttattgaag tctctgttta attttgttca atatgacatg
    19501 cttaagagaa aatgaatgat gaaaccatga tttcaaaatg ctttttgatg ttcacacgcg
    19561 cactacttta aattcggaaa tatagtgccg gcaaagataa ggtgataaca gtcatttaaa
    19621 aaccagataa cgctagcgat tgatatagat ttaagaagga gcaacttcaa aaagcgagcc
    19681 atatttatcc gtacactagc aaccatgtcc tatatattac gaaagctaat tgccaaaaat
    19741 ttagttgcaa accaaagtga atccactgag taattagctt
//
LOCUS       DANHPA010000045        19612 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.045, whole genome shotgun sequence.
ACCESSION   DANHPA010000045 DANHPA010000000
VERSION     DANHPA010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 19612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19612
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.045"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            66..1520
                     /gene="dltA"
                     /locus_tag="PTC28_001264"
     CDS             66..1520
                     /gene="dltA"
                     /locus_tag="PTC28_001264"
                     /EC_number="6.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011276287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--poly(phosphoribitol) ligase subunit
                     DltA"
                     /protein_id="HDK5716555.1"
                     /translation="MKDVLTMISQHSQTQPDRVAVQHQSESLTYLELESYSSRLASQL
                     LTSDNPVIVYGHMSPFMVVGMIGALKAGCGYVPIDQSIPTNRIQHIIEKVSPQFLINT
                     TDTPLNYEGVTEITIQGIQSFETVSSLPLMQNDGIAYTIFTSGSTGLPKGVKIYYESL
                     VEFANWVDLLNQYHTKDVWLNQAPFSFDLSVMAIYPCLISGGTLLLVNKEMIAAPKKL
                     YELFQNEKINVWVSTPSFMEICLMLPNVNEAGMPHLRTFLFCGEVLGHHTAQTLLNKF
                     PQSYLYNTYGPTEATVAITSIRVTQSVLDSHKYVPVGLPRKGTTLSVTEEGELIITGN
                     SVSAGYLKDPEKTEKAFFKDGEQRAYYSGDKAVFEDGLWFIKGRIDNQIKYNGYRMEL
                     EEIEAKMNALPFVNTSLVVPIYKKDKIAYLKGVVKLNSEDIDPADVPKEMKQRLKAEL
                     PDYMIPKKIEIAEEMPLTNNGKLDRKRINEVYQS"
     gene            1517..2734
                     /gene="dltB"
                     /locus_tag="PTC28_001265"
     CDS             1517..2734
                     /gene="dltB"
                     /locus_tag="PTC28_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000613541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-lipoteichoic acid biosynthesis protein
                     DltB"
                     /protein_id="HDK5716556.1"
                     /translation="MIPYSSFHFFAIALIVLLPVIILGLLGKRSKAYNLISTLIMIVV
                     IFADDQHNFFGIKYLSYHLLSLVLYIIWQALIIKGFERLRANKRSTPLYITTMILSIL
                     PLFMVKLLQSSWLGSGQLHLHSSKIVELFGFLGISYIMFKSVQLIMEIHDGTLKQTVD
                     LKKLVQFITFFPTISSGPIDRYRRFVKDYDKEIAMDKYSQLLGKAIHYIMIGLLYKYI
                     IAHFVQQYFVTPYTGHLESFGDYVIYMYGYSFYLFFDFAGYSLFAIALSYLYGIETPI
                     NFNQPFRAKNIKDFWNRWHMSLSFWFRDCIYMRFIFFMTKKKYIKSNFHVSNLAFLLN
                     FGIMGLWHGFEWFYVAYGLYHALLFFLYNHYEKWRKKRFGKWDHPVINALSIVITFHC
                     VAFGFLIFSGQLI"
     gene            2747..2983
                     /gene="dltC"
                     /locus_tag="PTC28_001266"
     CDS             2747..2983
                     /gene="dltC"
                     /locus_tag="PTC28_001266"
                     /EC_number="6.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--poly(phosphoribitol) ligase subunit
                     DltC"
                     /protein_id="HDK5716557.1"
                     /translation="MEFNEKVLDIIAEVADDDIVKSNPDIHIFDEGIMDSMQSVQLLV
                     AFQDELDIEVPIMDFNREEWGTPNQIINELAKLR"
     gene            2980..4122
                     /gene="dltD"
                     /locus_tag="PTC28_001267"
     CDS             2980..4122
                     /gene="dltD"
                     /locus_tag="PTC28_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-lipoteichoic acid biosynthesis protein
                     DltD"
                     /protein_id="HDK5716558.1"
                     /translation="MKLKQPYIIAFLASILLFGIFIILPAKWFVPPHIANQLPKYQVS
                     TDSDMLKGQYVQEAMIKDPHYYPVYGSSELNKEDPFQPAILLKGHTKNLFYVGTGGST
                     DLIQLMTLGAQYDHLKNKKMTVIISPQWFTRHGLTEENYQGRASQLQINSIFNNPNIS
                     NDIKTRLAKRLLHFKDNKQNDFLKHFAKSHEADGHFLNPLYANHLAKMEALNSYLPFH
                     HQGKLPRLFDKSQKQPLNWKSLDKEAHQYGAHHSQSNPYQIKDEYWKKLKHKKSVSRD
                     HEFRLKSVEYDDLSLLVDTLNAAGADVQYVLIPVNGKWYDHIDLPRDRRTAVNEKIVK
                     TIEDHHGHVVDLSHHDYEPYYMSDAVHIGWRGWVEVTQHIKQHIDQ"
     gene            complement(4809..6167)
                     /locus_tag="PTC28_001268"
     CDS             complement(4809..6167)
                     /locus_tag="PTC28_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HDK5716559.1"
                     /translation="MSIVKLLLKKSSPQQGIVLYYLVAIVGAFLLLNLPGVHKPGVKV
                     APIDTLFVAVSGVSVTGLTPVNISETYSAFGYIVLLVILNIGGIGVMAIGTLLWVVLG
                     KHIGIRERQLIMLDNNREAMSGTVKLILDIVRTILVIELVGATLLAFYFYQDIHDLKE
                     AILQGVFVSISATTNGGLDITGDSLIPYANDYFVQTIVMFLIVLGSIGFPVLLEIKAY
                     IKNRIPNFRFSLFTKVTTVTYLLILIVGMLGILLIEAHGVFANESWHKTLFYAMFQSV
                     STRSAGLQTFDVSQFSDATNLLMGGLMFIGSSPSSVGGGIRTTTFAIIILFVINYKPN
                     AEKSSIKVFNREIHNQDIQRSFAVFCIAIVMTFVGTFIIMLNEGHHIDFIKIYFEIMS
                     AFGTCGLSTGITSELGSVSKVVLMILMFIGRVGLISFIIMMSGNREPAKYHFPKERIQ
                     IG"
     gene            complement(6184..7836)
                     /locus_tag="PTC28_001269"
     CDS             complement(6184..7836)
                     /locus_tag="PTC28_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HDK5716560.1"
                     /translation="MERDQKHVIPRQHYKRKRREYFHNEEREERLKAEEKENALKAEK
                     EKKQAKNNEERVKDNLRKARIEKLTHDDGDKNQQPSEITAKQKSESARPLEETSSVTI
                     NGSEAKEAARTGAVAETTHQSNKSPHETSEATAKTEDEQDHTEDSHQTEASKHQYTTQ
                     RDWTEKVTQFISREWAKILIVLAAILVLLLLFAIFNNVNKSDNANMKQALETQQKEKG
                     TNKKVTQTMANANTAVKSVVSIENNSQPTPDAVQDSDAQAQVEKESGSGVVYKKVGDT
                     LYILTNAHVVGDRKEHELTFGNKQTAKAKVIGKYKMADIAVMTMKAPKGDTLKPLKHG
                     DSSAVVLGEPVLVVGNPLSLDFQNTVGEGIVSGLNRDVPVDFNQDDKYDTLLSTFQVD
                     APINPGDSGGAVVDQEGHLIGIASLKINMPSVQNMGFAIPVNSALAIAQKIEKEGDIQ
                     QPKTDIDIHNVVDVDKATRDEYKIPQDVSTGVVVQKVNDNSPAKNSGLKKGDVIVELD
                     SKPIKDNLAYKQKLTQHIDQQKPVKLKVLRENEMKEISFKLK"
     gene            complement(8147..8956)
                     /locus_tag="PTC28_001270"
     CDS             complement(8147..8956)
                     /locus_tag="PTC28_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HDK5716561.1"
                     /translation="MLMDPSLLLSYGWVILVLVFLEGLLAADNAIVMAVMVKHLPPEQ
                     RKKALFYGLLGAFVFRFIALFLISILANFWWIQAIGAAYLIYMSAKNLYDFFKHKGGE
                     HEQPDNDDHHYDESGVEKKVSAKEFWGTVFKVEVADIAFAIDSMLAALAIAVTLPTIG
                     VHFGGMDAGQFAVMFIGGLIGVILMRFAATFFVELLNKYPGLEGAAFAIVGWVGIKLV
                     VLVLAHEDIGMIPHDFPHSTLWQIIFWTVMIGLVLIGWFTSVVRNKKHDAS"
     gene            complement(9419..10981)
                     /locus_tag="PTC28_001271"
     CDS             complement(9419..10981)
                     /locus_tag="PTC28_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HDK5716562.1"
                     /translation="MSIKKEVESRKTFAIISHPDAGKTTLTEKLLYFSGAIREAGTVK
                     GKKTGKFATSDWMKVEQERGISVTSSVMQFDYDDFKINILDTPGHEDFSEDTYRTLMA
                     VDSAVMVIDCAKGIEPQTLKLFKVCKMRGIPIFTFINKLDRVGKEPFDLLDEIESTLG
                     IETYPMNWPIGMGQNFFGIIDRKERTIEPFRDEENTLHINEEYELEETHDIANDSIFT
                     QAIEELMLVDEAGESFDNDALMRGDLTPVFFGSALANFGVQNFLNAYVDHAPMPHARQ
                     TDEEVEVSPFDTDFSGFIFKIQANMDPKHRDRIAFMRVVSGAFERGMDVTLQRTGKKQ
                     KITRSTSFMADDKSTVNHAVAGDIIGLYDTGNYQIGDTLVAGNQKFHFKALPQFTPEI
                     FMKVSPKNVMKQKHFHKGIEQLVQEGAIQYYKSPHTNQIILGAVGQLQFEVFEHRMNN
                     EYNVDVVMEPVGKKIARWIENEEDVQDKMSTSRSILVNDRYDNKVFLFENDFATRWFE
                     EKFPEIKLYSLL"
     gene            complement(11002..11241)
                     /locus_tag="PTC28_001272"
     CDS             complement(11002..11241)
                     /locus_tag="PTC28_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YueH family protein"
                     /protein_id="HDK5716563.1"
                     /translation="MKIRESHSENYSAKVWLYHNQKEHYIVVSIPDLYWSIQIEDTLY
                     GEELTEHLFVHLFNVIDEEEAQILALRITRWLQEV"
     gene            complement(11231..12715)
                     /locus_tag="PTC28_001273"
     CDS             complement(11231..12715)
                     /locus_tag="PTC28_001273"
                     /EC_number="6.3.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011276211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-
                     lysine ligase"
                     /protein_id="HDK5716564.1"
                     /translation="MNAQQLFDHILIKQVIGRLDIEVNDITTDSRQAKAGSIFVASKG
                     YTVDSHRFAQDVVEQGCQIVVVNRALELQGDVTQVIVPDTLRVASHLVHHLYGFPSKQ
                     LTTIGVTGTNGKTSIATMIHHIYRKLGKGSAYLGTNGFQINETVTKGVNTTPETVVLT
                     KKIHEAVEAGAEAMTLEVSSHGLSLGRLSGVEFDVAIFSNLTQDHLDFHGTMEAYGHA
                     KSLLFSQLGQDLSRDKYVIINADDPFSTYLKSVTPYESLTYGIEQEAQFMATNIHESL
                     QGVTFDFVTPFGTYPVRSPYIGRFNIANLMAAMLGVWVKGAPLETVTKVVADLEPVEG
                     RLEVLDPSLPIDLIIDYAHTADGMAKLIDAVEPFVKQKLIFLVGMAGERDLTKTPEMG
                     RVASRADYVIFTPDNPANDDPKMLTAELAKGATHDRYVEFTDRAEGIRHAIEVAEPGD
                     TVVLASKGREPYQIMPGHIKVPHRDDLIGLEAAYQKFGGGPNEN"
     gene            13385..14560
                     /locus_tag="PTC28_001274"
     CDS             13385..14560
                     /locus_tag="PTC28_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011303473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diglucosyl diacylglycerol synthase"
                     /protein_id="HDK5716565.1"
                     /translation="MITEKKKILIITGSFGNGHIQVTNSIVEQLNQMNLDNLTVIQRD
                     LFLEAHPIMTTITKKWYINSFKYFRRMYKAFYYSRPDQLDKCFYKYYGLNKLLNLLLK
                     EKPDLILVTFPTPVMSVLTEQFNMNIPIATVMTDYRMHKNWITPNSERYYLATHDLKQ
                     EFEAVGIPSDRIKVTGIPISEQFEEPIDRAAWLRQHHLDPEAQTILMSAGAFGVSKGF
                     DEMIQRILDESQNAQVVMICGHSKELKRQLSASFKDNPNVLILGYTTHMNEWMAASHL
                     MITKPGGITISEALIRKIPMIFLNPAPGQELENALYFEQKGFGKIANTPTEAIDIVTH
                     LTRHSNEIDQMIHNMSEARQPHATKRLCQDLLDLLYNASTFETVYGKVPLYAKLLVK"
     gene            14538..15722
                     /locus_tag="PTC28_001275"
     CDS             14538..15722
                     /locus_tag="PTC28_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5716566.1"
                     /translation="MQNYSSNKIAMRNFYILLVILFLMEFARGMYVLSYLPLLPTATT
                     IAVSITSIAISIHFIADSITNFFVGFVLKRFGAKVVLTSGFFLALVSLFLIIWMPTSP
                     MTLILSAVMLGVAVCPIWVIMLASVDERIRGTQMGYVYFAWLAGMLAGMIGMNLIFKA
                     HPTHFNFLMALCVAIAFVLYYFVKVKLTDYNTKNVKQQLKQIVSVSQRHLVLFPGILL
                     QGIAISALIPVLPQYAVDIVGVSTVEYTVAIVIGGIGCTISMLFLSKMIDAYSTRFMY
                     SVIFAGFIIYGLAIFALTLIQQIVIVWIIALFIGLLYGLLLPTWNTFMAQFIHPSEQE
                     ETWGVINSIQGFGAMLGPLFGGPISQFMGSPIFTFYFAALLIFFLALFYGVYFVKQRR
                     TY"
     gene            16128..17615
                     /locus_tag="PTC28_001276"
     CDS             16128..17615
                     /locus_tag="PTC28_001276"
                     /EC_number="3.1.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylsulfatase"
                     /protein_id="HDK5716567.1"
                     /translation="MDTQQPNIILICVDQLRFDTLGHHHHPVVSTPHLDMLASQGYHF
                     SQMYTAVPSCIASRAALMTGLSQAHHGRVGYEDNVDWAYDQFMADSFRNAGYQTEAVG
                     KLHVTPERKRIGFDHVMLHDGYLHEARKYTAPYGQNFEYADDYLMWLKEQLGHHADLM
                     DDGIEPNSWVARPWMYGEQFHPTNWVVHEGIRFLQRRDPEKPFFLNLSFTRPHPPLNP
                     PQYYFDMYMNKIDEFPVIEMGAWKDIEEPLPFSITAKKGHYHKDELDRMRAGYYGNIT
                     HIDHQIGRFLIVLNEQRIAKNTIILFVSDHGDQLGEHNLFRKAYPYQGSIHIPMMIYD
                     KGNLLKGKHRDLHQIGELRDIYPTLLDLANIDIPKNIDGVSLKPALYDDTFVTREYLH
                     GEHSFGKDSNQFIMNDAWKYTWYPVRGIEQLFHYQDDPHEKHNLIHEAEYQAIKNELK
                     QQLIKALTDREEGFVKNGELQILSETKPTLDHLQARNKSAQRQRQ"
     gene            17720..18616
                     /locus_tag="PTC28_001277"
     CDS             17720..18616
                     /locus_tag="PTC28_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HDK5716568.1"
                     /translation="MDMLWWQILLLTIYAGVQILDNLSFGFLAQPVMAGLISGLVMGD
                     VTTGLIIGGGMQLTILGVGTFGGASHIDANSGTVLAVAFSVAIGMNPEQALATLGVPV
                     ASLMIQTDILARFTNTFFAHRIDSKIEKMDYRCIERNYLYGAIPWSLSRAVPVFLALT
                     FGSNIVKPVVNYLNTDLKWLGDGLTLAGALLPAVGFAILLKYLPLKRHYPYFILGFII
                     TALFVTIFGGLTTLGTSVAGLDKNFTAAMGPLPMLAVALIGFSLAAMAYQRSTQTAPS
                     YGGQQRQQSNVDDEGEIEDDEL"
     gene            18603..19496
                     /locus_tag="PTC28_001278"
     CDS             18603..19496
                     /locus_tag="PTC28_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HDK5716569.1"
                     /translation="MTNSKTKHSKEPLALNTPFEDPTLTGSPPKEPYQLTKKDFRQIN
                     LRSLLFFQWGWNYERMQGSGYLFTILPQLRKIYGDNSPELKEMMRTHAQFFNTSNYFN
                     TIVTGIDIAMEENEGLKAKESVKGIKVGLMGPFAAVGDAIFGSLIPTIFGAIAANMAT
                     DGNPFGILLWFFAVLFIIGFRWKQLPFAYKEGISLVTTMQHRLESLTNAATLMGVFMV
                     GALVATMIRVKFAFEPTLGDVTINFSENADMILPRLVPLAVVFSVYWLLGRKNMNSTR
                     AIFIVIIVAILFSSLGILQKL"
BASE COUNT         5898 a         3934 c         3515 g         6265 t
ORIGIN      
        1 cggtaatggt gatacacaaa atacttttat ctacaacgat ttttaatcat taaaggagcc
       61 gacacatgaa agatgtttta acaatgattt cacagcacag tcaaacccag ccggaccgag
      121 ttgccgtaca acatcagagt gagtcattaa cttatctaga gttagaaagt tattcctcac
      181 gcttagcatc acaactgctt acaagcgaca accctgttat agtttatggc cacatgtctc
      241 catttatggt agtgggtatg attggtgctc ttaaagccgg atgcggttat gttccaattg
      301 atcaatctat acctacaaac cgtatccaac atattataga aaaagtttca ccacaatttt
      361 taattaacac gacagataca ccgcttaatt atgaaggtgt gacagagatt actattcaag
      421 gtattcaatc attcgagact gtatcatcat tgcctttaat gcaaaatgat ggtattgctt
      481 acacgatttt tacatcgggc tcaacaggtc ttcctaaagg tgtgaaaatt tattacgaga
      541 gcttagtaga gttcgcaaat tgggtggact tattgaacca atatcacacg aaagatgttt
      601 ggttaaacca agcgccattc tcatttgatt tatcagttat ggcgatttat ccgtgtctca
      661 tttcaggcgg tacactattg ttagtcaaca aagaaatgat tgcagcacct aaaaaattgt
      721 atgagctgtt ccaaaacgaa aaaattaatg tttgggtgtc taccccatca tttatggaaa
      781 tttgcttaat gttaccaaat gtcaatgaag caggtatgcc acatttacgt acgttcttat
      841 tctgtggtga agtgttaggt caccatacag cgcaaacatt gttaaacaag tttccacaat
      901 cttatttata caatacgtac ggccctacag aagcgactgt tgcgattaca agtattcgag
      961 tgacgcaatc agtacttgat agccataagt acgttcctgt gggcttacca agaaaaggga
     1021 cgacattaag tgtgactgaa gaaggagagc tcattattac tggaaattca gtaagtgcag
     1081 gttatttaaa agaccctgaa aaaacagaga aagccttttt caaagatggt gaacaacgcg
     1141 catactattc aggtgacaaa gcagtatttg aagatggctt gtggtttatt aaaggccgca
     1201 ttgataacca aatcaaatac aacggctatc gtatggaact tgaagaaatt gaagctaaaa
     1261 tgaacgcatt gccatttgtg aatacatcat tggttgtacc aatttataaa aaagacaaaa
     1321 tcgcctactt gaaaggtgtc gtaaagttaa attcagaaga catcgatccg gcagacgtac
     1381 caaaagaaat gaagcaacgt cttaaagctg agttacctga ttatatgatt cctaaaaaaa
     1441 tcgaaattgc tgaagagatg ccattgacta acaatggtaa actcgaccgc aaacgaatta
     1501 acgaggtata tcaatcatga tcccatacag tagctttcac ttttttgcga ttgcgctcat
     1561 tgtgttgtta cctgtgatca tactggggtt gttaggcaaa agatctaaag cttacaactt
     1621 aatcagtaca ttgattatga ttgtcgtcat atttgcagac gatcaacaca actttttcgg
     1681 tatcaagtat ttaagttatc atttattgag ccttgtttta tacattattt ggcaagcgct
     1741 cattattaag gggttcgagc gtcttagagc aaacaagcgc tccacaccgc tttacattac
     1801 gacgatgatt ctgtctatcc tgccactctt tatggtcaaa ctcctacaaa gttcatggct
     1861 aggttcggga caacttcatt tgcacagctc aaaaatcgtg gaactgttcg gtttcctcgg
     1921 tatttcgtac attatgttca aaagcgttca attaatcatg gaaattcatg acggcacatt
     1981 aaagcaaact gtagatttga agaagctcgt acaattcatt acgttcttcc ctacgatctc
     2041 ttcaggtcca attgatcgct atcgtcgttt tgtaaaagat tacgataaag aaatcgctat
     2101 ggacaaatat tcacaactcc ttggtaaagc gattcattac attatgatag gtttacttta
     2161 caaatatatt attgcgcatt tcgtccaaca gtattttgtg acaccttata caggtcacct
     2221 cgagtcgttt ggcgattacg tgatatacat gtatggctat agtttctacc tgttttttga
     2281 ctttgcaggt tacagcttat tcgccattgc attgagttac ttgtatggta ttgaaacacc
     2341 gatcaacttt aaccaaccat ttagagcaaa aaatattaaa gatttctgga acagatggca
     2401 catgagtcta tcgttctggt tccgtgattg tatttacatg cgttttattt tctttatgac
     2461 taagaaaaaa tacattaaat caaacttcca tgtgtctaac cttgccttct tacttaactt
     2521 cggtattatg ggactttggc acggttttga atggttttat gtggcgtatg gtttatatca
     2581 cgcattgtta ttctttttgt ataatcacta tgaaaaatgg cgtaaaaagc gtttcggtaa
     2641 gtgggatcat ccagtgatta acgcactgag catcgttatc actttccact gtgtcgcttt
     2701 tggcttttta atcttttcag gacaattaat ttaaggagag agttttatgg aatttaatga
     2761 aaaagtttta gatataattg cagaagttgc cgacgatgat attgtgaaat caaatccaga
     2821 tattcatatt tttgatgaag ggattatgga ttcaatgcaa tctgtacaat tattagtagc
     2881 gtttcaagac gaacttgata tagaagtacc aattatggac tttaatagag aagagtgggg
     2941 tacgccaaat caaatcatta acgaattggc aaaattacga tgaagctaaa acaaccttac
     3001 atcattgctt ttttggcgag tattctatta ttcggtattt ttatcatatt gccggctaaa
     3061 tggtttgtgc caccacatat cgcaaaccaa cttcctaagt atcaagtgtc aacagatagt
     3121 gatatgttaa aaggccagta tgtacaagaa gctatgatta aggaccctca ttactaccca
     3181 gtttatggtt caagtgagct gaataaagaa gatccatttc aacctgccat cttgttaaag
     3241 gggcacacga aaaatctctt ttatgtgggc actgggggtt ccacggattt aattcagttg
     3301 atgacgttag gtgcacagta tgaccattta aaaaataaaa aaatgacggt catcatatca
     3361 ccacaatggt ttacgagaca tggcttaact gaagagaatt accaaggtcg tgcttctcag
     3421 ttacaaatta atagtatatt caataaccca aatatttcta acgatattaa aacacgctta
     3481 gccaaacgtt tattgcattt taaagacaat aagcagaacg actttttaaa acattttgca
     3541 aagtcacatg aagcagatgg gcatttcttg aacccccttt atgcgaatca tcttgcgaaa
     3601 atggaagcat tgaatagtta tttaccgttc catcatcaag gtaaattgcc gagactgttc
     3661 gataaaagtc aaaagcaacc attgaattgg aaatcattag acaaagaagc gcatcaatat
     3721 ggggcgcatc acagtcagtc taacccttac caaatcaaag atgaatattg gaaaaaactt
     3781 aaacataaaa agtcggtgag ccgtgaccac gagttccgct taaaatctgt tgagtatgat
     3841 gatttatcac ttttagttga tacactcaat gcagcaggtg cggatgtgca gtacgtgtta
     3901 atcccagtta atggcaagtg gtacgaccac attgatcttc cgcgtgacag acgtacagcg
     3961 gtcaatgaga aaatcgtcaa aacgattgaa gatcaccacg gtcatgttgt agatttatca
     4021 catcacgact atgaacctta ttacatgagt gatgctgtcc acatcggatg gcgcggttgg
     4081 gttgaagtga cgcaacatat taaacagcac atcgaccaat aaattgaata acacattaaa
     4141 gaaagccata acctgtcaat tttcaaaaca ggttatggct ttctttactt ggttgataca
     4201 cttttctttt cagtttgttg actattgcat tgagcattgt gtcttcgtaa ccttatcata
     4261 caaaatataa aaaagaggat tgagatagag aaaattttat gcctcaatcc attcatagat
     4321 tgatgattca ttaatgactt tacgtatagt aggaaaatgg gagtgattga gatgcaaaaa
     4381 attgatgcta ttgatttctt gatttcatca acttgccctc agttaagatt gcctatacgg
     4441 ctgagactcc tgagggggag gcgtgcatac tgctagcagt cacttcttta ctttaaaagt
     4501 ggctaccgtt taacgcagta gctgcctgac ttctcaatgc acatgctttt gagaagtcga
     4561 gtcagccttg cgggggcagt acaacgaaat ctttgtgaca catgagattt ctgtactgct
     4621 cccaaaatcc aattcggctt ccatctcttg tatgctccaa tcaagtcgaa ttgagttgaa
     4681 gggccagccc ttaggaaagc gaagccatga aggcaatcaa aactacaatt catatggagg
     4741 gcaagtttaa caagaatatt gcatcaatcg catcaaaaat tttctatatc tcatcgccct
     4801 tcctattatt acccaatttg aatgcgctct ttcggaaaat gatacttcgc tggctcacga
     4861 ttaccactca tcataataat aaaggaaatc aaacctacac gtccgataaa cattaaaatc
     4921 atcaagacga cttttgaaac actgccgagc tctgaagtta tccccgtcga taaaccacac
     4981 gttccgaatg cggacataat ttcaaaataa atcttaatga aatcaatatg atgcccttcg
     5041 tttaacatga tgataaatgt gcctacaaat gtcatcacaa tcgcaataca aaataccgca
     5101 aaggaacgtt gaatatcttg gttatgaatt tcacgattaa atactttgat ggatgacttt
     5161 tcagcgttcg gtttgtagtt aatgacaaac agaataataa tcgcgaaagt tgtcgttcgt
     5221 ataccgccac ctacagaact tggtgaggaa ccaataaaca tgaggccccc catcagaagg
     5281 tttgtcgcat ctgaaaactg tgacacatca aaagtttgta atcctgcact tcgcgtcgac
     5341 accgattgaa acatcgcata aaataatgtc ttgtgccatg actcatttgc gaacacacca
     5401 tgcgcttcga ttaataaaat cccgagcata ccaacaatta aaatcaataa atacgttacc
     5461 gttgtcactt tagtaaacag tgaaaatcga aagtttggaa tcctattttt aatgtacgct
     5521 ttaatttcta ataatactgg aaagccaatt gagcccaaaa cgataagaaa catcacaatc
     5581 gtttgtacaa agtaatcgtt cgcgtatgga attaaggagt cccctgtgat gtctaatccc
     5641 ccatttgtcg tcgcagagat ggaaacgaag acaccttgta atatcgcctc ttttaaatca
     5701 tgaatatctt gataaaaata aaatgcgagc agtgttgcac ctactaattc aatcactaaa
     5761 atcgttctca caatatctaa aatcagtttg actgtcccac tcatcgcctc tctattgtta
     5821 tctaacataa tgagttgacg ttcacgtatg ccaatgtgct tgcctaatac aacccataac
     5881 agcgtaccga tagccataac accaatgcca ccaatattga ggatgaccaa caagacaatg
     5941 tatccaaatg ctgaatatgt ttcggaaata ttgaccggtg ttaatcctgt tacactgaca
     6001 cctgataccg ctacaaacaa cgtatcaatc ggtgcgactt ttacgcctgg tttgtggaca
     6061 cctggcagat taagtagcaa aaacgcaccg acaattgcga caagataata caagacaatc
     6121 ccttgttgtg ggctggattt ttttagtagt aatttgacta tggacaagtc attcacccca
     6181 aagttatttc aatttgaatg agatttcctt catctcattt tcacgtaaga cctttaactt
     6241 cactggcttt tgttgatcaa tgtgttgcgt taacttttgt ttataagcca aattatcttt
     6301 gataggttta ctatctaatt ctactatgac atcgcctttt ttcaaaccag aatttttggc
     6361 cggactgttg tcgttcactt tttgtacgac aacacctgtt gatacatctt gaggaatttt
     6421 atattcatca cgtgtcgctt tatcaacatc caccacgtta tgtatatcaa tatccgtctt
     6481 cggttgttga atgtcgcctt ctttttcgat tttttgcgca atggctaacg ctgagttaac
     6541 cggaatggca aatcccatat tttgaacact tggcatgtta atttttaatg atgcgatacc
     6601 aattaaatgg ccttcttgat cgactaccgc gccacctgag tcgcctggat taatcggtgc
     6661 atcaacttgg aacgtactga gtaatgtgtc atatttatcg tcttgattga agtctactgg
     6721 aacatcacga tttaatcctg atacaatacc ttcaccgact gtattttgga agtcaagact
     6781 taacggattg cccacaacta aaaccggttc tcctaataca actgcactag aatctccgtg
     6841 tttaagtggt tttaatgtat cgcctttagg ggctttcatc gtcattacag caatatcagc
     6901 cattttatac ttaccaatca ctttagcctt agcggtttgc ttattaccaa aagtgagttc
     6961 atgttcttta cgatctccaa cgacatgcgc atttgtcagt atgtaaagag tgtcgcctac
     7021 ttttttgtag acgacacccg agccactttc tttttcaact tgtgcctgag catctgaatc
     7081 ttgaactgca tccggtgtag gctgactatt attttcaatc gaaacgacag attttacagc
     7141 tgtattcgca tttgccatcg tttgtgtgac ttttttattc gttcccttct ctttctgttg
     7201 cgtttcaagt gcttgtttca tattcgcatt gtcgctttta ttgacgttat taaaaatagc
     7261 aaacaataac aacaatacta aaatggctgc gagcacgatt aaaatttttg cccattctct
     7321 agagatgaat tgtgtgactt tttcagtcca gtcacgttgg gttgtatatt gatgtttcga
     7381 cgcttctgtt tggtgactgt cttcagtatg gtcttgttca tcttcagtct ttgcggttgc
     7441 ctctgatgtc tcatgtggcg acttgtttga ctgatgcgtt gtttcagcta ctgcacctgt
     7501 acgcgccgct tccttcgctt cactgccatt gatagtcact gatgatgtct cttcaagtgg
     7561 tcgtgcactt tcggattttt gtttggctgt tatttcagat ggttgttgat ttttatcccc
     7621 atcgtcatgc gttaattttt caatacgtgc tttacgtaga ttatctttga cacgttcttc
     7681 attatttttc gcttgctttt tttccttttc agctttgagc gcgttttctt tttcttcagc
     7741 tttgagtctt tcctcacgct cttcattatg gaaatattcg cgacgtttgc gcttataatg
     7801 ttgccttgga atcacatgtt tttgatctcg ttccattgca cgccctcctt atgtatctct
     7861 tttatctatt atgacatatc gctacttaaa tttctgtaat ctttacttat atatcacaaa
     7921 ctttttgaat ggttttaagt tgtattttct acgatacatc gcatgctgac aatatttatt
     7981 tttatcgaat cttaaataca tgtttcactt tacaccattc aacaacgaag ccgctgtccc
     8041 ctgtttaaac attgatattg cttttgcttt aatacattaa aacataaaga aaggccagga
     8101 taacgtaata tcccagccta agtcaaacgc ccttattcag ctttcattaa gatgcatcat
     8161 gttttttatt acgcaccact gatgtaaacc aaccgatcag tacaagtcca atcatgactg
     8221 tccagaaaat gatttgccac aatgtagaat gtggaaaatc atgtggaatc ataccgatat
     8281 cttcatgtgc taagacgagt acgacaagtt tgattccgac ccatccaaca atcgcaaagg
     8341 cagcaccttc aagaccagga tacttgttca gtagctctac aaagaatgtt gcagcaaaac
     8401 gcattaaaat gacaccgata agaccaccga taaacatcac cgcgaattga cctgcatcca
     8461 taccaccgaa atgcacacca atcgtcggta atgttacagc aatcgctaat gctgctaaca
     8521 tagagtcaat cgcaaaagca atatctgcaa cttcaacttt gaagacagtg ccccaaaatt
     8581 ctttcgcact cacttttttc tcaacacctg actcgtcata atgatgatca tcgttgtcag
     8641 gttgttcgtg ttctccacct ttatgtttga aaaagtcata taagtttttc gctgacatat
     8701 aaatgagata tgccgcaccg atcgcttgaa tccaccagaa attcgctaaa atactaatta
     8761 agaataatgc gataaaacgg aaaacaaatg cgcctaacaa accataaaaa agtgcttttt
     8821 tacgttgttc tggtggtaaa tgtttcacca tcacagccat aacaattgca ttatctgcag
     8881 ctaatagtcc ttctaaaaat acaagtacta atatgaccca tccataagat aataacaaac
     8941 tcggatccat taacagacca ctccttcaat tttttatatg ggcgcatgtg ctcgccctgt
     9001 atcatttcat tgtttcgcgt gaacacccac gcttagtgaa agacataatt aaagagaccc
     9061 atgctaaatc aatagcaaag gtctcactta gcaattttat catgcccgct tcaccggaag
     9121 aatttcagtt tcttcgtaat gacgacaaag cgttattaac gtttgttacg ctaatcaagt
     9181 tactcccctc tgacaatagt cagtcacagg tatttaatta tgatgttaac attataccca
     9241 attttttatg aaaataacag cctattatct tgaaatttaa aaatattcat aaccaatgca
     9301 tctcgtcttt tattgtttac aggacatctt caacaatgaa caaagcagac tgtgcctcta
     9361 ttcaacacat cgtccgcttt gttcattgtt tattcactat catgtgtata tcaatacatt
     9421 ataacaagct gtacagttta atttctggga atttttcttc aaaccaacgt gtcgcaaaat
     9481 cattttcaaa taaaaagact ttattatcat agcggtcatt tactaaaatt gaacgactcg
     9541 tactcatctt atcctgcacg tcttcttcat tttcaatcca acgcgcgatt tttttaccga
     9601 caggttccat cacaacatcg acattatatt cattgttcat gcgatgttcg aacacttcaa
     9661 attggagttg tcctactgca cctaaaatga tttggttcgt atgtggtgat ttataatatt
     9721 gaatcgcccc ttcttgcacg agctgctcaa tccctttatg gaagtgcttc tgtttcatga
     9781 cgtttttcgg cgatactttc atgaaaattt caggtgtaaa ctgaggcaat gccttgaaat
     9841 ggaacttttg gttacctgca acaagtgtat ccccaatttg gtaatttcct gtatcatata
     9901 aaccgataat gtcacccgct acagcatgat tcactgtcga tttgtcatcg gccataaaac
     9961 ttgttgaacg tgtgattttc tgttttttac ctgtacgttg taatgtcacg tccataccac
    10021 gctcgaacgc accgctgaca acacgcataa aggcaatacg gtcgcggtgt ttcggatcca
    10081 tgttcgcttg gattttaaag ataaaccctg aaaaatctgt atcgaacggg ctcacctcaa
    10141 cctcttcatc tgtttgacgt gcatgtggca tcggtgcgtg gtcaacataa gcattcaaga
    10201 agttttgtac tccgaaattc gctaatgctg agccgaaaaa gactggtgtt aaatctccac
    10261 gcattaacgc atcattatcg aatgactcac ctgcttcatc gacaagcatt aactcttcaa
    10321 tcgcttgcgt aaaaatacta tcattcgcaa tgtcatgcgt ctcttctaat tcatattctt
    10381 cattgatatg caaagtgttt tcttcatcac ggaacggctc aatcgtccgt tcttttcggt
    10441 caataatccc gaaaaagttt tgccccatac caattggcca gttcatcgga tacgtttcga
    10501 taccaagtgt tgattcaatt tcatctaaca aatcgaacgg ttcttttcca acacggtcaa
    10561 gtttgttaat aaatgtaaaa ataggaatcc ctcgcatttt acatactttg aataacttta
    10621 atgtttgtgg ctcaatccct tttgcacagt caataaccat gaccgcacta tcgaccgcca
    10681 ttaatgttcg gtacgtatct tcagagaaat cttcatgccc tggcgtatct aaaatgttaa
    10741 ttttaaaatc atcgtaatca aactgcatga cagaacttgt aactgaaatc ccacgttctt
    10801 gttcaacttt catccagtca cttgtcgcaa atttacctgt tttcttccct ttgactgtcc
    10861 ctgcttcacg aatcgcacca ctaaagtaca gcaatttttc agttaatgtc gttttccccg
    10921 catcagggtg agaaataatc gcaaacgtct tgcgtgattc tacttctttt ttaatactca
    10981 ttgtacgtct cctttaattc atcaaacttc ttgtaaccat cttgtgatac gtaatgctaa
    11041 aatttgtgct tcttcctcat ctatcacatt aaataaatgc acaaataaat gttctgttag
    11101 ttcttcacca tatagtgtat cttctatttg aatcgaccag tataaatctg gaatcgatac
    11161 gacaatataa tgttcttttt gattgtgata taaccaaacc ttagctgaat aattttcact
    11221 atgactttcc ctaattttca tttggacctc caccgaattt ttgatacgcc gcttctaacc
    11281 cgattaaatc atcacgatga ggcactttga tgtgacctgg cataatttga tacggttcac
    11341 gtcctttaga tgcaagtaca acagtatccc ctggttctgc cacttctatc gcatgtcgaa
    11401 taccttctgc acggtctgta aactccacat aacgatcatg tgtcgcgcct ttcgcaagtt
    11461 cagccgtcaa cattttcgga tcatcatttg ctggattatc tggtgtgaaa atgacataat
    11521 ctgcacgtga agcgacacgt cccatttcag gcgttttcgt taaatcgcgt tctccagcca
    11581 tgccaactag gaaaataagt ttttgcttaa cgaacggttc gactgcatca atcaatttcg
    11641 ccataccatc tgctgtatgc gcataatcaa taattaaatc gattggcaat gatggatcga
    11701 gtacttctaa acgcccttct accggttcta aatcagcgac gacttttgtg accgtttcta
    11761 gtggtgcacc tttcacccat acacctaaca ttgctgccat taagttcgca atgttgaatc
    11821 gaccgatgta cggcgaacgc actggatatg taccaaaagg tgttacaaaa tcaaacgtca
    11881 cgccttgtaa agattcatga atattggttg ccataaactg cgcctcttgt tcaatgccat
    11941 atgttaagct ttcgtatggc gtaactgatt ttaaataagt agaaaatggg tcatctgcgt
    12001 taataatgac gtatttatca cgactcaaat cttgaccgag ttgactaaat aacaacgatt
    12061 tcgcatgacc atacgcctcc attgtgccat gaaaatcgag gtggtcttgt gttaaatttg
    12121 aaaatatcgc aacatcaaat tcaacaccac tcaagcgacc taaactaagt ccatgcgagg
    12181 acacttctaa tgtcatcgct tcagcccctg cttctaccgc ttcatgaatc ttcttcgtta
    12241 agacaacggt ttctggtgtt gtgttcacac cttttgtcac tgtttcgtta atttgaaagc
    12301 cattcgtgcc taaatacgca ctacctttgc ctaactttcg ataaatgtga tgaatcatcg
    12361 tcgcaatcga tgtcttacca tttgtccctg tgacaccgat cgtcgtcagc tgcttgcttg
    12421 gaaacccata caaatgatgc actaagtgac tcgccacacg taatgtatct ggtactatca
    12481 cttgtgtgac gtcaccttgt aattcaagcg cacgattcac aacaacaatc tgacatcctt
    12541 gttctacgac gtcttgcgca aaacgatgac tatcgacggt atagcctttt gatgcgacaa
    12601 agatactccc agcctttgct tgacgcgaat ctgtcgtaat atcattcact tcaatatcta
    12661 aacgtcctat gacctgttta attaaaatat gatcaaataa ttgttgtgca ttcacagaca
    12721 tctctccttt atatatacac tcatttatta tacacttttt tgcttgaaat cctatgagga
    12781 atggagatgg aacatagaaa atttttgatg ccattgatgc aaatattttt gtcaaacttg
    12841 ccttccctat tgctttgcag tttttgatta tcttcatggc ttcgcgtttt tacagtaaac
    12901 accatgatag gaagttttat gaaatcaaaa aacaatagca tcaatttttt atctcccctt
    12961 cattctcatt ttcctataga tttaaaatca ttcatgcatc acaaatctat taacggattg
    13021 aggttaaaat ttttctatga cccaactcca actgcatttt atctgtcaaa tacgattgaa
    13081 attttaatat acgggtatat tgatttaaat attattttat tctttcttac atcttaagac
    13141 tgaaatatgt aaatcactat tgtgcctatc tatggagtat attaagataa tataatgaat
    13201 ttaccgtaaa atatgggtcg catatacaca ttttctcatc ttttacaacg aggtgtacag
    13261 ttaaaatgat tttaacattg ttatcgtttt gtaagaaatg ccattaactt ttcacaagac
    13321 gtacaaattg cggtacacta gcatagaacc agttaaagtc tcaatatctc ggagggtggc
    13381 tttcatgatc actgaaaaga aaaaaatatt gattatcacc ggttcattcg gtaatggcca
    13441 tattcaagtg acgaacagta ttgttgaaca gttgaatcaa atgaatcttg acaatctgac
    13501 agtcatacaa cgtgatttgt ttttagaagc acatccgatt atgacaacga ttactaaaaa
    13561 gtggtacatc aatagtttta agtatttccg ccgtatgtat aaagcatttt attatagtcg
    13621 ccctgatcaa ttagataagt gcttctataa atattacggt ttaaataaat tactcaactt
    13681 actattaaaa gaaaagccag atttgatttt ggtaactttc ccgacaccag tcatgtctgt
    13741 attaaccgag cagtttaata tgaacattcc gattgcgaca gtcatgacag attatcgtat
    13801 gcacaaaaac tggattacac cgaattctga gcgctattat ttagccactc atgatttgaa
    13861 gcaagaattt gaagcggtag gcattccaag tgatcgtatt aaagtaacgg gtatccctat
    13921 ttctgaacaa tttgaagaac cgattgatcg tgcagcttgg ttacgtcaac atcaccttga
    13981 tcccgaagcg caaaccattt taatgtcggc aggtgcgttt ggtgtgtcta aaggatttga
    14041 cgaaatgatt caacgtatcc ttgatgaaag tcagaatgcc caagtcgtca tgatatgcgg
    14101 tcatagcaaa gaactgaaac gtcaattgtc tgcttcgttt aaagacaatc ctaacgtgct
    14161 tattttaggt tatacgaccc atatgaatga atggatggcg gcaagtcatt taatgattac
    14221 gaaaccgggt ggcattacca tttcagaagc attaatccga aaaataccaa tgattttctt
    14281 gaatcccgcg ccaggtcaag aactagaaaa cgcgctctat tttgaacaaa aaggcttcgg
    14341 gaaaattgcg aacacaccga cagaggcgat tgatattgta acgcatttaa cacgtcactc
    14401 aaacgaaatt gaccaaatga tacacaatat gagtgaagcc cgtcaaccac atgcgacgaa
    14461 acgtttatgc caagacttgt tagacttact ttacaatgct tcaacattcg aaactgtata
    14521 tggaaaggtg cctttatatg caaaactact cgtcaaataa gatagctatg cggaatttct
    14581 atatcctatt agtcatttta tttctgatgg aatttgcaag aggaatgtat gtattaagtt
    14641 atttaccttt attaccaacc gcaacaacca ttgctgttag tattacttca attgcaattt
    14701 ccatacattt tatcgctgac tcaataacaa actttttcgt tggctttgtg ttgaaacgtt
    14761 ttggcgctaa agttgtactc acttcaggct tttttctcgc tttagtgagt ctctttttaa
    14821 ttatttggat gccgacctcg ccgatgacgc ttattttaag tgctgtcatg ctcggtgttg
    14881 ccgtctgtcc aatatgggtt atcatgctcg ctagtgtaga tgaaagaata cgtggtactc
    14941 agatgggtta cgtttatttt gcatggcttg cagggatgtt agccggtatg attggaatga
    15001 acttaatttt caaagcacat ccgacacatt ttaacttttt gatggccctt tgtgtagcga
    15061 ttgcttttgt gctttattat tttgttaaag tgaagttaac agattataat acgaaaaatg
    15121 tgaaacaaca gctcaaacaa attgtgagtg tatcacagcg tcaccttgtg ctctttccag
    15181 gaattttact gcaagggatt gcgattagcg cactcattcc tgtcttgcct caatatgccg
    15241 tggatatcgt tggtgtaagt accgttgaat atacggtagc gattgtcatt ggcggtatcg
    15301 gttgtacgat ttcgatgctg tttttatcta aaatgatcga tgcctattct acacgtttta
    15361 tgtatagtgt aattttcgcg ggttttatca tttatggctt ggcaattttc gcattaacat
    15421 tgattcagca aattgtcatt gtttggatta tcgcattatt tatcggctta ctgtacggtt
    15481 tacttttacc gacgtggaat acatttatgg cacaattcat tcatccgagt gaacaagaag
    15541 aaacttgggg tgtgatcaat agtatccaag gttttggtgc catgcttgga ccattattcg
    15601 ggggaccaat atctcaattt atgggcagcc ctatttttac attttatttt gcggcactcc
    15661 ttatcttttt cttagctctg ttttatggcg tttatttcgt caaacaacga cggacatatt
    15721 aaaaatatta acaacgactt tgaagcaaac acaaaacttg tttcaaagtc gttgttgttt
    15781 tgtgtttgat aattgctctt ttcaatactt tcttaacttc ccaaatttaa gtccgcgcta
    15841 atccaccttt ctttcgtcta ctacgctgtg caactcaaca aaatcattta atagcaattg
    15901 cgttcaaaca gtttacaaaa tatataagaa cttagagaaa tcaagcaata ttgacaaaaa
    15961 ttttcaaaac ttgttataac cactcatgac aagctgaaat gccctaaaat taagtaaacg
    16021 cttacatcga tagccctata attcacttat tctccttaaa attggtcata ttgtcaatac
    16081 gtaccattag tgctattttt aaattaaata gagaaaggag agattgcatg gatacacaac
    16141 aaccgaatat catcctcatt tgtgtggatc aactgcgctt tgacacgtta ggtcatcatc
    16201 atcatcctgt cgtttcaaca cctcatttgg atatgttggc atctcaaggt tatcatttta
    16261 gtcaaatgta tactgccgtg ccaagttgta tcgcaagtcg tgcagcattg atgactggtt
    16321 tatcacaagc ccatcacggt cgagtcggtt atgaagataa tgtcgattgg gcctatgatc
    16381 aatttatggc tgacagtttt agaaatgcag gttatcaaac agaagcagtg ggcaagttgc
    16441 acgtgacacc tgaacgaaaa cgtattggct tcgaccatgt catgttacat gatggttatc
    16501 ttcatgaagc acgtaagtac actgcaccat atggtcaaaa ttttgaatat gctgacgact
    16561 atttaatgtg gttgaaagag caattaggtc atcacgcaga cttaatggat gatggcatcg
    16621 aaccaaattc atgggttgct cgtccgtgga tgtatggaga acagtttcat cctacaaact
    16681 gggttgtcca tgaaggtata cgttttttac aaagaagaga ccccgaaaaa ccttttttct
    16741 taaatctttc atttacacgc cctcacccac cactcaatcc gcctcaatac tattttgata
    16801 tgtatatgaa taaaatagat gaatttccag tgattgagat gggtgcctgg aaagatatag
    16861 aggagccgtt accttttagt attacagcta aaaaaggaca ttatcataaa gacgaattgg
    16921 atcgtatgcg tgcaggttat tacggcaata tcacccatat cgatcaccaa atcggtcgtt
    16981 tccttatcgt gctaaatgaa caacgaatcg cgaaaaatac aatcatttta tttgtatcag
    17041 atcatggcga tcaattaggc gaacacaatt tattcagaaa agcatatccg taccaaggga
    17101 gcattcacat tccgatgatg atttatgata aaggcaactt attaaaagga aagcatcgcg
    17161 atttacatca aattggagaa ttaagagata tttatccaac tttattagat ttggccaata
    17221 tcgacattcc caaaaacatt gatggtgtga gcttaaaacc tgccctttat gatgatactt
    17281 ttgtgacacg tgaatattta catggtgaac acagtttcgg taaagattcg aaccaattta
    17341 tcatgaatga tgcttggaag tacacttggt atccagtaag aggcattgaa caattgtttc
    17401 attatcaaga tgacccacat gaaaaacata acttaattca tgaagctgaa tatcaagcga
    17461 ttaaaaatga attaaaacaa caattgatta aagcattgac ggatagagaa gaaggctttg
    17521 tgaaaaatgg tgaactacag attttgtctg aaacaaaacc gacactcgat catttacaag
    17581 cgcgaaacaa atctgcacag cgtcaacgtc aataattcaa tcaaaatgac actgttttgt
    17641 tctaaagcta tatgtactac acatatagct tcagtttaaa taaaatatgt aagcgttaac
    17701 ataaagggag ttgaaaatta tggatatgct atggtggcaa attttgcttt taacaatcta
    17761 tgcaggtgtc caaatcctag ataacttatc atttgggttt ttagcacaac ctgttatggc
    17821 cggtcttatc agtggtctcg ttatggggga tgtcactaca ggccttatca tcggcggcgg
    17881 tatgcagtta acaatcctcg gtgttgggac attcggtggt gcgtctcata tcgatgccaa
    17941 ctcaggtaca gtattagcgg tagccttttc agttgcgatt ggtatgaacc cagaacaagc
    18001 gttagcaact ttaggggtac cagtagcgag tttaatgatt caaacagata ttttagcacg
    18061 tttcactaac acattttttg cacatcgtat tgatagcaaa attgaaaaaa tggactatcg
    18121 ctgcattgag cgtaactact tatacggtgc gattccgtgg tcattatcac gcgcggttcc
    18181 tgtgttttta gctttgactt tcggtagcaa tatcgttaaa ccggtcgtga attacttgaa
    18241 cacagactta aaatggttag gtgatggctt aacattagca ggtgcccttt taccagctgt
    18301 tggtttcgca atcttattaa aatacttacc attaaaacgt cattacccat actttattct
    18361 tggtttcatc attactgcat tattcgttac gatttttggt ggtttaacaa ctttaggtac
    18421 ttcagttgct gggttagaca aaaacttcac agctgcaatg ggtccccttc caatgcttgc
    18481 agttgcttta atcggtttca gtttagcagc aatggcttac caacgtagca cgcaaacagc
    18541 accaagctat gggggtcaac aacgtcaaca gtcaaatgta gatgacgagg gggaaataga
    18601 agatgacgaa ctctaaaacg aaacattcaa aagaaccttt agccttaaac actccatttg
    18661 aagatccaac attaacagga agtcccccta aagaaccata tcaactcacg aagaaagact
    18721 ttcgtcaaat caacttacgt agcttactgt tcttccaatg gggttggaac tacgagcgta
    18781 tgcaaggctc tggttactta tttacgattt taccgcaatt acgtaaaatt tatggtgata
    18841 actcacctga attaaaagaa atgatgcgta cacatgcgca attcttcaat acaagtaact
    18901 actttaatac tattgtgaca ggtatcgata tcgcaatgga agaaaatgaa ggccttaaag
    18961 caaaagagtc tgtaaaaggg attaaagttg gtttaatggg accattcgcg gcagttgggg
    19021 atgccatttt cggttcatta attccaacga ttttcggtgc catcgcagca aatatggcaa
    19081 cagacggtaa tccattcggt attttacttt ggttcttcgc agttttattc atcattggct
    19141 tcagatggaa acaattgcca ttcgcttata aagaagggat ttcactcgtt acaacgatgc
    19201 aacaccgttt agaatcatta acaaatgcag caacattaat gggtgtcttt atggtcgggg
    19261 ccctcgtggc gaccatgatt cgtgtgaaat ttgcatttga gccaacactt ggtgatgtca
    19321 ctataaattt cagtgaaaat gcagatatga ttttaccgcg tcttgtacct ttagcagtcg
    19381 ttttcagtgt ttattggtta ttaggtcgta aaaacatgaa ttcaacgcgt gcgattttca
    19441 tcgttattat cgtagctatt cttttctcaa gcttaggcat tttacaaaag ttatagcaat
    19501 aataaaatcc ccgcaacaac ggtcaatttt agccgttatt gtgggaattt tttgggttat
    19561 atatttttaa cggttggtga gaggttcact gaccgttatt ttaattattg at
//
LOCUS       DANHPA010000046        19036 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.046, whole genome shotgun sequence.
ACCESSION   DANHPA010000046 DANHPA010000000
VERSION     DANHPA010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 19036)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19036)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19036
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.046"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            41..1072
                     /locus_tag="PTC28_001279"
     CDS             41..1072
                     /locus_tag="PTC28_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000364852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HDK5716570.1"
                     /translation="MDLLIGTAFLVLVLVIFTLFTYKAPNGMRAMGALANAAIATFLV
                     EAFNKYVGGRVFHNDFLEQVGAAAGDLGGVAAAGLTALAIGVSPVYALVIAAACGGMD
                     LLPGFFAGYLIGYLMKYTEKYVPDGVDLIVAVLIVAPLSRAIAMLLTPVVNNTLVRIG
                     DIIQSSTDTSPVIMGIILGGIITVVGTAPLSSMALTALLGLTGVPMAIGAMAAFSSAF
                     MNGTLFHRLKLGDRKATISVSIEPLSQADIVSANPIPIYITNFFGGATAGLVIALSGL
                     INDATGTATPIAGFIVMFGFNSWVTVVVYGVIMGIIGLIWGYIGSIVFKKYPIVTKAD
                     MIKRGATDA"
     gene            complement(1131..1607)
                     /locus_tag="PTC28_001280"
     CDS             complement(1131..1607)
                     /locus_tag="PTC28_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HDK5716571.1"
                     /translation="MFNYPFYDTYRVENDWIDRNGHMNDAVYARLFSLAIDHFHDAIG
                     LTTAERDRRNYTVFTLETHITYLKELKHDTPFHIKVHIYDYDVKRTHFFLELIHQETE
                     TVMATAETMMMGMDRKTERPAVFPDDIFHAIQHYANSQGTMQWPKQLGHRIGIPRA"
     gene            1785..2816
                     /locus_tag="PTC28_001281"
     CDS             1785..2816
                     /locus_tag="PTC28_001281"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 2 isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HDK5716572.1"
                     /translation="MTNKREQRKNEHVRLALAQSDTLQSDFDRIQFVHHAIPEMNVDE
                     VTLLPNFKALHMSHVLYINAMTGGSEWTVKTNEQLAQVAKATQIPMAVGSMHAALKNP
                     AVRHSYAVAREQYPEGQIWANVSADVTLEEAQAAIEMIHANALQIHVNAPQELVMPEG
                     NRQFKHWLTRISEIIKGVEVPVIVKEVGFGMSYDTIQQLIDVGVSYVDISGHGGTNFI
                     SIENERRQFKDMGYLKDWGQSTVVSLLEARNLSSRVHVLASGGIRHPLDAIKALRLGA
                     EAVGMSRPILKMLHEEGVEATIEYVEDFKTQMAYIMTLLNAKNITELRQAAIVFDPHL
                     KNWIQQRQL"
     gene            2990..4195
                     /locus_tag="PTC28_001282"
     CDS             2990..4195
                     /locus_tag="PTC28_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HDK5716573.1"
                     /translation="MGKIPVTVLSGYLGSGKTTLLNHILNNREGRRIAVIVNDMSEVN
                     IDKDLVAEGGGLSRTDEKLVELSNGCICCTLRDDLLKEVERIVKRGGIDQIVIESTGI
                     SEPVPVAQTFSYVDEALGIDLTEICRLDTMVTVVDANRFIKDYQSGDMLLDRDQAVGE
                     DDERTIADLLIDQIEFCDVLILNKIDLVSEEEANRLEAMLRKLQPTAKLIRAVNAQVN
                     IDEVLETGRFNFEAASQSAGWLQELEAGGHATHTPETEEYGISSFVYRRRLPFHAERF
                     NTFLENMSESIVRAKGIAWLAQYNNVACLVSQAGTAVDIHPVTFWVASMPKAERAAIL
                     QERPDVRADWDPEYGDRHTQLVMIGIDLDEAAITAQLDACLLNSQEIDADWSQFSEPY
                     GWEIQRQEA"
     gene            complement(4223..5434)
                     /gene="gltS"
                     /locus_tag="PTC28_001283"
     CDS             complement(4223..5434)
                     /gene="gltS"
                     /locus_tag="PTC28_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HDK5716574.1"
                     /translation="MLELNSITTLFLACLLLIVGQAIVNKVEIFNRLSIPSPVIGGLI
                     FAIISAILTSTGVLHIKIDGKFFQDFFMLAFFTTIGLGASFKLLKLGGKVLIVYWVLC
                     GVLATFQNVIGVSMAKVLNIDPLLGLTAGAMSMEGGHGNAAAYGQTIQNYGIDSAVTA
                     ALAAATLGLVAGGLLGGPVVRYLIKKHDLTPSNTATIQKDYSNVELNRRLHKNFTVNE
                     VFFIQATVILFCMGLGTYLGQLFSDWSGINIPLYVASMFIAVIIRNISEFANLNLIDL
                     KLTNQIGDISLSIFLSIALMSIKLTEVYNLALPLIVIVICQIIFVALFSIFIVFRLLG
                     KNYDAAVMIGGFIGHGLGATPNAMANLDAITKKFGNSPRAYLVVPIVGAFLVDLLGVP
                     IITTFINIFKP"
     gene            complement(5606..6466)
                     /locus_tag="PTC28_001284"
     CDS             complement(5606..6466)
                     /locus_tag="PTC28_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDK5716575.1"
                     /translation="MQLLWKMFKKNQFEANIDECGIEIGTPHGGYQYEVTKPAVLHIV
                     MSGTGTLIYNQKKYTLKPGDLFLLCRGMNVHYESTLDEPWTYYWVGFSGKLVFDYLNR
                     TSLYETRVIQNQPTNTIRQIIYRMCQRSIEYATENSDDIQHMRDLYELLYELHQHFPK
                     PFHVVKNERYSNVREAIRYINDNYMHAISINDVAKHVNVSRSYLYKMFKKHIDQSPQH
                     YLIHIRMYHASQLFKETDLQSQEIADRVGYKDPLLFSRAFKKHFGVTATQYREEQQLK
                     IESTLDNQKR"
     gene            6601..7386
                     /locus_tag="PTC28_001285"
     CDS             6601..7386
                     /locus_tag="PTC28_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716576.1"
                     /translation="MNQHLKKIEMRINQYQLTKRTRYIPYMSRHVFAIPYIKFLSHAV
                     IPLNQQWHYETETGIIHSFTDKNEMSDLHYVRSFIIEDFDDSKDYHLNIEEVQQSFMI
                     YLNQSDVGAVEGNEGHIEFDITHAVHGEMNVIELVPIKTMMSPQQNLFNDMYVLERAN
                     DRIVDYSVDVSQNARGDMSVRIQIQDIEGAPLISYLLQNEQHVTFAKGVMDIDSSYHL
                     VIPVHLVEQQGKHFTLFLETEDETIAHYIGSNGEHEPVNVKTV"
     gene            7578..7898
                     /locus_tag="PTC28_001286"
     CDS             7578..7898
                     /locus_tag="PTC28_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001831459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HDK5716577.1"
                     /translation="MNIQFKKGALEMIVLLIIKKEPQYGYSLVQNISKHMMIAEGTVY
                     PLLRRLVKESCLTTYYEPSMEGPARKYYELTRVGNQRLQQLKSEWHEFVSIVKIFIEE
                     SECE"
     gene            7895..8452
                     /locus_tag="PTC28_001287"
     CDS             7895..8452
                     /locus_tag="PTC28_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1700 domain-containing protein"
                     /protein_id="HDK5716578.1"
                     /translation="MTKSEYLNSLYQYLKGMPESEKRDIVAEYENHFIEGLRDGKSEQ
                     EIIGMLGAPKEMARAINAESAVNQAEESQKTSNITQALVTVIGLSVLNFILIIGPLMI
                     ALGILFGIVLTSIAFLLTPFALVFKYYVLSEVILIEDVFAVMGWFGLGLILIVLLFFI
                     LKWSYIGFVKYLKWNVKLVKRGVSA"
     gene            8449..9264
                     /locus_tag="PTC28_001288"
     CDS             8449..9264
                     /locus_tag="PTC28_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat protein"
                     /protein_id="HDK5716579.1"
                     /translation="MKRALFIVFLIGCVMFVVGLAGTVYYTFFHDQRDHEMTQKTYKT
                     EGIKKLALEIKGRDVTFVKGDTLKIKGDISNEDHFKVKKNGTQMNVSISSERRQPISI
                     HLNPFRPLDRKQLIITLPSSQVDQVALNGTDTTMTVDAFELAHLTLNLTRADLYMDDS
                     HIQQLATAMKDSALYTEHTDFKKMTAKVDASDVTLEDVSLDIPMSWEINNGIVDVTYK
                     GQLSNTAFHIDGDERAVDLDGVEGLNNNQVGRGEHQVDIKVTNYGDATFSAYE"
     gene            9435..10769
                     /locus_tag="PTC28_001289"
     CDS             9435..10769
                     /locus_tag="PTC28_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HDK5716580.1"
                     /translation="MSNELRSQKQYGALALLPLVIFLVLYIGVGLVFTMLGTKDAFQL
                     LPRHVAIFIAIVIAWTCYDRKTPITQKVKIFTENAGSSGIAELGLILLLAGGFASAAS
                     AMGGQEAMVNLGLSIIPPSLLIPGIFVMSAFVATSIGTSTGTQAAFIPIGVAVAQAAD
                     LNVAAAAAAVIAGAYFGDNLSIISDTTIAATTGVGAKMKDKFKANFLIALPAAIITFI
                     IYAIVGGTGHIKGDLSFNFIDVIPYLFVLIAAIAAMNVMLVLISGTVLTGIIGVARGN
                     IGVFEWTSKIGEGMEGTFSIFLIAFLISGLVALIRYYGGIDWIVETMKKRANGPKSAE
                     YAMSFLSGLLSAALVHNVVAIIISAPIAKELGQMYKIAPKRMASLLDIFAASALMVLP
                     HDSGMLMAEQFGHVSYFEVLKFSYYPLILILCAVISIHIGMFRKQKNNAVDE"
     gene            complement(10850..11458)
                     /locus_tag="PTC28_001290"
     CDS             complement(10850..11458)
                     /locus_tag="PTC28_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HDK5716581.1"
                     /translation="MDFIHLPTIQTAQNLLGVQLIYEAPEITYSGYIVETEAYLGFKD
                     QAAHGYQGRRTPKVESLYQQGGTIYAHVMHRHLLINFVTQEQGIPEGVLIRAIQPEAG
                     IEMMQRNRGRQGYALTNGPGKLTAAMQIPRSIDGSQLNTGRLKIDTKNRKFPREIEIG
                     PRIGIPNKGDWTAAHLRYSVKGNPYVSHRRKSEMSPIEETWR"
     gene            11638..12324
                     /locus_tag="PTC28_001291"
     CDS             11638..12324
                     /locus_tag="PTC28_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HDK5716582.1"
                     /translation="MNLETPKVGFVEAFKLYWTNYVNFKGRSRRSEYWWVMLWHLIIT
                     IPALFLGVVLMFIPVLGWIVAVILFLAIGLYGLATIIPNLALTVRRFHDVGFSMLIPI
                     LSFIVGIIYNIASAFTQKETLYQNTSTGTDVSIISEFAFLPNWIAYTLMAISIILSLV
                     TFIVCLLDSKEQDNQYGPSPKYGRQYVGDDRNLGSMAYQQSHRNDTMTRQGEPRDIEE
                     TEKKDDPYLY"
     gene            12583..13472
                     /locus_tag="PTC28_001292"
                     /pseudo
     CDS             12583..13472
                     /locus_tag="PTC28_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167137.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
     gene            13474..14718
                     /locus_tag="PTC28_001293"
     CDS             13474..14718
                     /locus_tag="PTC28_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5716583.1"
                     /translation="MRKFAATFKLTYFKKLKARSFIVSTLIMMLIITGAANFDKIIKQ
                     FDGGSENVAIVTQDNTLYQQVKEQMATINKDVHYEKLSEDEAKKQIKQEKIDQAYVIH
                     EDKQHALTGTILSTSSPSDSDKGTLQAILTQLQTQKIAQDLGLQGDDLQRLQSQSQID
                     NTIIQKAGQENSSASEDEQDFAKIIAMLGTFLMFFIVFNYAQQIATEVATEKTSRVSE
                     MIITSVKPTTHIMAKIAGVLALAFTQIVILALTFVANYIIFDLQSMFGSVNLTLTSHL
                     TRLIVFGVIFLILGILSFVILAAILGNLTARIEDLAQSLMPMTFLILAAFYAGYFGSF
                     NPDNVFIHIMSYVPFFSPFVTFSRLALTTTPTFEAIIAVIIHIVLIGVLLFLAAKSYK
                     NAVLSFEKGWKNVLKRAFQREQ"
     gene            14871..15203
                     /locus_tag="PTC28_001294"
     CDS             14871..15203
                     /locus_tag="PTC28_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnfA family protein"
                     /protein_id="HDK5716584.1"
                     /translation="MNFLYSTAIFIIAGLCEIGGGYLIWLWLRADRPFWLGWIGGIVL
                     ILYGIVATFQTFPTFGRVYAAYGGVFIVMSLLWAYLIDKEPPDKFDIIGGVVCIIGVL
                     IMVLPARG"
     gene            15238..16263
                     /locus_tag="PTC28_001295"
     CDS             15238..16263
                     /locus_tag="PTC28_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose mutarotase"
                     /protein_id="HDK5716585.1"
                     /translation="MNINIEQQSNGIELIKIENKESKIVFMNYGARIVSWKIGDNNIV
                     LGNEVEADEFYPHNPFYFGATVGRFGGRIAKGQFELNGQTYQLEQNDGDNHLHGGLQG
                     LSNRLFDYEIIESETEESAQVYFTTTVKQDEDHYPGNIDIKVVFTYDASKTWTVEYFA
                     ESDADTLFNPMNHVYFNLNRDNKVVDNHVIASEKLQMFPLDASGMPVLEPVDLAAIMG
                     SHEIELATLFNTGDVHIQQQVTTRGGLDHPFEVKDGKMTISNRDLVLHVETDAPQIVM
                     YTLNDSEDWKSRMNIFKPHSGITIETQSIPNDINLLGTSAHSVLKAHTPFYSKTSYHV
                     ELKPRNA"
     gene            complement(16335..16994)
                     /locus_tag="PTC28_001296"
     CDS             complement(16335..16994)
                     /locus_tag="PTC28_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002466553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HDK5716586.1"
                     /translation="MNYAIYAISTGKIESLQYEDRRPMKSALNKKPIQEKMWLSRTGF
                     LEDEQEYKDHGGPDKAVCLYSKSNYAMWQDVIQPLPDSALFGENITVYAIDETELFFG
                     DQYRLGEAIIEVSEIREPCWKLQSKYGYSQLVKDMSKSGKTGCYFRVIKEGFVSPNSN
                     LSLVQHAPEPTRLSVQELNDIYYNDRKNKERIAYALNNPYLTEKRKSVLEKMLAQATM
                     K"
     gene            17120..17815
                     /gene="rpiA"
                     /locus_tag="PTC28_001297"
     CDS             17120..17815
                     /gene="rpiA"
                     /locus_tag="PTC28_001297"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase A"
                     /protein_id="HDK5716587.1"
                     /translation="MSNKQLKLMTLDEAVSRIEDGMTVGIGTGSTVELLVPKIAGLIH
                     EKGYQLIGVCTSERTENQAKSLNIPIAHINDVQHIDIAIDGADEIDPKLNLIKGGGGA
                     LFREKVVDTFADRFIVIADQSKLVDYLGQTFKLPVEVDRFNWKQVVQLIEKKYEIEVT
                     RRMMEHTPFITDNGNYILDCALNREIDPYQVHEFLIHLVGVLETGYFLDTVEEAIVGT
                     EQGVKLIKLSDIK"
     gene            complement(17925..18854)
                     /locus_tag="PTC28_001298"
     CDS             complement(17925..18854)
                     /locus_tag="PTC28_001298"
                     /EC_number="3.5.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formimidoylglutamase"
                     /protein_id="HDK5716588.1"
                     /translation="MYQKPNQKLWTGRLDSEIDRQAFRHFQTVQFVDLEHEAPQDGDI
                     ALLGYAIDEGVRLNKGRVGASEGPDAIKSAFAGLPASTDLNIIEYGNWTHSAEDLITS
                     QQAYGHYVAQLLRHHHRTFLLGGGHDIAYAQYLGVREAYPEQSIGVINIDAHFDNRQE
                     GYSTSGTSFHQMLTEDEHLDYFVLGIQRTSNTQALFDYADKTNTQYVLAEELMGQICP
                     PVKDKLDHFINQHDVILFTICMDVIDSAYAPGVSANAVLGLTPFTVLELGRRILQSDK
                     VTSISIAETNPKYDIDQRTAKLAAHFLGHFIHC"
BASE COUNT         5865 a         3221 c         4091 g         5859 t
ORIGIN      
        1 tgaacaaggg gcctttttcg aataacaaga ggggggcatt atggacttac ttatcggtac
       61 agcattttta gttttagtac tcgtcatttt cacattattt acatataaag cgcctaatgg
      121 tatgcgtgcg atgggagcgc ttgcgaatgc agccattgcg acatttttag ttgaagcttt
      181 taataaatac gtcggcggcc gcgtgttcca caatgacttt ttagaacaag tgggtgctgc
      241 agcgggtgac ttaggtggtg ttgctgcagc gggtctgacc gctttagcca ttggtgtttc
      301 gcccgtttat gccttagtga ttgcggcagc ttgtgggggt atggatttat taccaggatt
      361 ttttgcgggt tatcttatcg gttatttaat gaaatatact gagaaatacg tgccagacgg
      421 tgtggatctt attgttgctg tattaatcgt tgcaccatta tcaagagcga tcgcgatgct
      481 attaacacct gttgtcaaca atacactcgt tagaattggt gacattattc aaagttctac
      541 agatacaagc ccggtcatta tggggattat tttaggtggc atcattaccg tcgtcggtac
      601 agcgccacta agttcgatgg cgttgaccgc actgctaggt ttaacaggtg tgccaatggc
      661 tattggtgcg atggccgcat ttagttctgc atttatgaac ggcacactgt tccaccgttt
      721 aaaattaggt gaccgtaaag caacgatttc agtgagtatt gaaccgttgt cacaagcaga
      781 tatcgtttcg gccaatccga ttccaattta tattacgaac ttttttggtg gtgcgacggc
      841 aggtcttgtc attgcgcttt ccggtttgat taacgatgcg acagggacgg cgactccgat
      901 tgccggcttt atcgtcatgt ttggttttaa ttcttgggtg actgtggtcg tgtatggtgt
      961 catcatgggg attattggac ttatttgggg ctatatcggc tctattgtct ttaaaaaata
     1021 tccaattgtc actaaagcag acatgattaa acgtggtgca acagacgcat aattgaataa
     1081 cataacaaaa cactacaagc tgtgacgagg acttgtagtg ttttttgaat ttatgcgcga
     1141 ggaatgccga ttcggtgtcc caattgtttt ggccactgca tcgttccttg tgagttagca
     1201 tagtgttgaa tggcgtggaa aatatcgtca ggaaacactg ctgggcgctc tgtttttcga
     1261 tccataccca tcatcatcgt ttctgcagtg gccatgacag tttctgtttc ttgatgaatc
     1321 agctctaaaa agaagtgtgt gcgtttgaca tcataatcat aaatgtgaac tttaatgtga
     1381 aagggtgtat catgctttag ttctttaagg tacgtaatat gagtttctaa agtgaaaacc
     1441 gtgtagtttc gacggtcgcg ttctgctgtt gttaacccaa tggcatcatg aaaatgatcg
     1501 atggctaaac taaaaagtct tgcataaaca gcatcattca tatgaccatt gcgatcaatc
     1561 caatcatttt caacgcgata tgtatcataa aaagggtaat tgaacatagg gacacctctt
     1621 tgttttattt gttcatcagt ataccgcaaa atgttaaaga gataaaacag tgtgacatcc
     1681 ccatatttct tttttaatat gttgatttca agaaaatact ttatgtcggc actgaatatg
     1741 atatagtcaa attaatcaac caataatgag gggtttttaa ggtaatgacg aataaaagag
     1801 aacaaagaaa aaatgaacat gtacgattag cactcgcgca aagtgatacg ctacaatccg
     1861 attttgatcg cattcaattt gttcatcatg caataccgga aatgaatgta gatgaggtga
     1921 cactgttgcc taactttaaa gcactccata tgtcacacgt cctctatatt aatgcgatga
     1981 cgggtggttc tgaatggacg gtaaaaacga atgaacaatt ggctcaagtc gctaaagcta
     2041 cacaaattcc aatggctgta ggaagtatgc atgccgcgtt gaaaaatcca gctgtacggc
     2101 attcttatgc agtggctcgt gaacaatatc cagagggtca aatttgggcg aatgtgagtg
     2161 cggacgtgac gttggaagaa gcacaagcgg cgattgagat gattcatgcc aatgcgttac
     2221 aaattcatgt taacgcacca caagagttag tcatgccaga ggggaatcga caattcaaac
     2281 attggttaac gcgaatcagt gaaattatta aaggcgtcga ggtaccggtc attgtgaaag
     2341 aagtgggctt tgggatgagc tatgacacga tacaacaact tatcgatgta ggcgtctctt
     2401 atgttgacat tagtggtcac ggtggaacga actttatctc aatagaaaat gaacgtcgcc
     2461 aatttaaaga tatgggttat ttaaaagact gggggcaatc gacagtcgtt tcattattag
     2521 aagcccgaaa tttgagcagt cgcgttcatg tacttgcaag tggagggata cgccacccac
     2581 ttgatgcgat taaagcatta cgtttaggtg cagaagcagt gggtatgtcg cgaccgattt
     2641 taaagatgct tcatgaagag ggcgtggaag cgacgattga atatgtagaa gattttaaaa
     2701 cacaaatggc ttatattatg actttattga atgccaaaaa tatcacagaa ttgcgtcaag
     2761 cggcgattgt gtttgatccg catttaaaaa actggataca acagcgtcaa ttgtagtcga
     2821 actgaggaat gcatgagggt gtcatcacgc cgtcattcgt tcctttttta atgcagttaa
     2881 cgggtcagcc caaaaatcat ttcaaatttt cattgcgttg atggaagtat ttattatata
     2941 ctgtaaaacg taattattac gatttgtaat gaaatgagga gggctattta tggggaaaat
     3001 cccagtaacg gtattaagtg ggtatttagg atcaggtaag acgactttgc tgaatcatat
     3061 tttaaacaat cgcgaaggaa gaagaattgc tgtcattgtg aacgatatga gtgaggtaaa
     3121 tattgataaa gatcttgtcg ctgaaggagg gggactttcg cgtacagatg aaaaactcgt
     3181 tgaactttct aatggttgta tttgttgtac attgcgcgat gacttattaa aagaggtcga
     3241 acgtatcgtt aagcgtggcg gcattgatca aattgttatt gaatcgacag ggatttctga
     3301 accggttcct gttgcgcaaa cattttctta cgtggacgaa gcgctaggga ttgatttaac
     3361 agagatttgt cgtctcgata cgatggtcac tgttgtcgat gcgaaccgat ttattaaaga
     3421 ctatcaatct ggagacatgt tgttagatcg agatcaagcg gtgggtgaag atgacgaacg
     3481 tacgattgct gatttactca ttgatcaaat tgaattttgt gatgtgctca tcttgaataa
     3541 aatcgactta gtgagtgaag aagaggcgaa tcgtttagaa gcgatgttgc gtaaattaca
     3601 accgactgca aaattaatcc gagcggtcaa tgcacaagtg aacattgatg aagtattaga
     3661 aacagggcgc tttaattttg aagcggcgag tcaatcagca ggttggttac aagaacttga
     3721 ggcgggtgga catgcgacac atacacctga aactgaagaa tatggtattt cgtcatttgt
     3781 ttatcgcaga cgtttaccat ttcacgcaga acgctttaac acttttcttg aaaatatgtc
     3841 tgaatccatt gtacgtgcga aaggaattgc ttggttagca caatacaaca atgtcgcatg
     3901 tcttgtttct caagcaggaa cagctgtgga tattcatcct gtgacatttt gggtagcaag
     3961 tatgccaaaa gctgaacgtg cggcaatttt acaagaaaga ccggatgtgc gtgcagattg
     4021 ggatcctgaa tatggtgacc gtcatacaca acttgttatg attggaattg atttagatga
     4081 agcggcaatc actgcacaat tagatgcgtg cttattgaac agtcaagaaa ttgatgcgga
     4141 ttggtcacaa ttttctgagc catatggttg ggaaattcaa cgccaagaag cataaaaaaa
     4201 gaggtgtacg cacctctttt ttttatggtt taaagatgtt aataaatgtc gtaataatcg
     4261 gtactccgag taaatcaact aaaaatgcgc caacaattgg aacgaccaaa taggcacgtg
     4321 gtgaattacc aaactttttc gtaatggcat ctaaattggc cattgcattc ggtgtcgcgc
     4381 caagcccgtg tccgatgaag ccaccaatca tcacggctgc atcatagttt ttaccgagca
     4441 agcggaagac gatgaaaata gagaatagtg cgacgaaaat aatttggcat ataacgataa
     4501 caatcagtgg taatgctaag ttgtatactt ctgttaactt aatactcatt aacgcaattg
     4561 ataagaaaat acttaatgaa atgtcgccaa tttgatttgt gagttttaag tcgattaagt
     4621 ttagatttgc aaattccgaa atgttacgaa taattactgc aataaacatt gaagcaacat
     4681 ataatggaat attgattcct gaccagtcac tgaataattg acctaaatat gtcccaagtc
     4741 ccatacagaa taatatgact gttgcttgaa taaagaacac ttcattcaca gtaaagtttt
     4801 tatgaagacg acggtttaat tctacatttg aatagtcttt ttgaatcgtt gctgtattac
     4861 taggtgttaa gtcatgtttt ttaattaagt aacgtacgac tggtccacct aataggccgc
     4921 ccgctacaag acctaacgtt gccgctgcaa gtgcggctgt cacagctgag tcaataccat
     4981 aattttgaat cgtttgacca tacgctgctg cattcccgtg tccaccttcc attgacatcg
     5041 cacccgctgt taaacctaat agcggatcaa tgttcaacac ttttgccatg gacacaccaa
     5101 tgacgttttg gaaggtcgct aacacaccac agagaaccca gtagacaatt aacactttgc
     5161 caccgagttt taataattta aatgacgccc ctaatccaat tgttgtgaaa aaggctaaca
     5221 taaaaaagtc ttggaaaaat ttgccatcga ttttgatgtg taataccccg gtagaagtta
     5281 atattgcaga gataatcgca aagatgagtc cacctatgac gggagatgga atgctgagac
     5341 gattaaatat ttctacttta ttcacaatag cttgccccac aattaataat agacaggcaa
     5401 gaaacaatgt tgtaatactg ttaagctcta acattgttac actcccccct ttgagttaat
     5461 aaaatagaaa gggctttcaa tcccatacta aactattata ctttttttaa aggcaaaaat
     5521 ctatataaaa atcaaatcga gtgtgattgt tcgaaatgac tagatatata tcattaaata
     5581 gtgagtagtt gattattggg ttgaatcacc gtttttgatt gtccaatgta ctttcaattt
     5641 ttaactgctg ttcttcacga tattgggtcg ccgtgacacc aaaatgtttt ttaaatgctc
     5701 tcgaaaatag caatgggtct ttgtatccaa cacgatctgc aatttcttgg ctttgcaaat
     5761 ctgtttcttt gaataattgt gatgcgtgat acatccgaat atgaattaaa taatgttgcg
     5821 gggattgatc gatgtgcttt ttaaacattt tatataggta actccggctg acattgacgt
     5881 gcttggcgac atcattaatc gaaatcgcat gcatataatt gtcattaata taacgaattg
     5941 cttctctaac gttagaatat ctttcatttt taacgacatg aaacggtttg ggaaaatgtt
     6001 gatgcagttc atacaggagt tcgtataaat cacgcatatg ttgaatatcg tcagagtttt
     6061 ctgtggcgta ttcaatagaa cgctgacaca tccgatatat gatttggcga atggtgttcg
     6121 ttggttgatt ttgaatgacg cgtgtttcat ataaagatgt acggtttaaa taatcaaaaa
     6181 cgagtttccc gctaaaacct acccaataat atgtccacgg ctcgtccaaa gtggattcat
     6241 agtggacgtt catgccacga caaagtaaga agaggtcacc cggtttcaat gtatactttt
     6301 tttgattgta tatgagcgta cccgttccag acatgacaat atggagcact gctggtttgg
     6361 tcacctcata ttgataaccc ccatgtggtg ttccgatttc aatgccacat tcatcaatat
     6421 tggcttcaaa ttgattcttt ttaaacatct tccagagtaa ttgcatttat cccacccatt
     6481 taactttaaa tatggaaaca ttttaacata taaagtgacg attggtatat attctcttga
     6541 agtctaaagt gttaaattaa aagcacaaaa aaatatatat tttaatactg gggtgatgag
     6601 atgaaccagc atttgaaaaa gatagagatg cgaattaatc aatatcaatt aacgaaaaga
     6661 acgcgttata ttccgtacat gagtcgtcat gtatttgcga taccatatat caaattttta
     6721 agtcatgcgg taataccttt aaatcaacaa tggcactatg aaactgaaac tggcatcata
     6781 cattcattta cggataaaaa tgaaatgtcg gacttgcact atgtacgttc ttttattatt
     6841 gaagattttg atgacagtaa agattatcat ttaaatattg aagaggtaca gcaatctttt
     6901 atgatttatt tgaatcaaag tgatgttggg gcggtagagg gcaatgaagg gcatatcgag
     6961 tttgatataa cacatgctgt tcatggtgaa atgaatgtca ttgaactggt gccaataaaa
     7021 acgatgatgt ccccacaaca aaatctgttt aacgatatgt acgtactcga aagggcaaac
     7081 gatcgaattg tggattattc tgtcgatgtg agccaaaatg cgcgtggtga tatgagtgtg
     7141 cgtattcaaa ttcaagatat cgaaggggcc ccattgatca gctatttatt gcaaaacgaa
     7201 cagcacgtca catttgctaa aggggtaatg gacattgata gcagttacca tttagtgatt
     7261 ccagtacatt tagtagagca acaagggaag cattttacgt tgtttttaga gactgaagat
     7321 gaaaccattg cacattatat tggatcaaat ggcgaacatg agccggtcaa tgtcaaaaca
     7381 gtttaaaata ccatttgaaa gcgtatctag gtgatgaaag cccctggtac gcatttttta
     7441 ttggttttga gcagagacct atagctgttc aaaaaaattt tacacagtac cttgcaatgt
     7501 ataatagtgt ttggtatttt atatttgagt attatacatt gattagtact gattaatata
     7561 ttgatggagg tgcaacaatg aacatccaat tcaaaaaagg tgcattagaa atgattgtac
     7621 tgttgattat taaaaaggag ccacagtatg gctattcact cgtacaaaat atttctaagc
     7681 atatgatgat tgctgaaggt acggtttatc cgttattacg tcgacttgtt aaagaaagtt
     7741 gtttgacgac ctattacgaa ccatcaatgg aaggacctgc gcgtaaatat tatgaactca
     7801 cacgtgtagg gaatcagcgg ttacaacaat tgaaatcaga atggcatgaa tttgtcagta
     7861 tcgtgaaaat ttttatcgag gagagtgaat gcgaatgacg aaatcagaat acttgaatag
     7921 cctttatcaa tacttaaagg gcatgccaga atcagaaaaa cgagacattg tggctgaata
     7981 tgaaaatcat tttattgaag gcttacgtga tggtaaatct gaacaagaaa ttattgggat
     8041 gttaggtgcg ccgaaagaga tggcacgtgc tatcaatgca gaaagtgcgg tgaaccaggc
     8101 tgaagagagt caaaaaacat cgaatatcac gcaagccctt gtcactgtga taggactcag
     8161 tgtactgaat tttatattaa ttataggtcc attgatgatt gccctcggta tcctgttcgg
     8221 tatcgtcctg acgagcattg cgtttctcct gacaccattc gccttagtgt ttaaatatta
     8281 cgttttatca gaagtcatcc tcattgaaga tgtgtttgcg gtcatgggtt ggttcggatt
     8341 gggactcatc ttgattgtgt tattattttt tatcctcaaa tggagctata tcggatttgt
     8401 aaaatatttg aaatggaacg ttaaactggt gaaaagaggt gtaagtgcat gaaacgtgca
     8461 ttgttcattg tgtttttaat cggatgtgtg atgtttgtag ttggacttgc tggcacggtt
     8521 tattacacat tttttcatga ccaacgagat catgagatga cacaaaaaac ttataagacg
     8581 gagggcataa aaaagttagc gctagaaatt aaaggtagag atgtaacatt tgtcaaaggt
     8641 gatacattga aaattaaagg tgacatctca aatgaagatc actttaaagt taagaaaaac
     8701 gggactcaaa tgaacgtctc catttctagc gagagacgtc aacccatctc gattcatctc
     8761 aatccgtttc gtcctttaga tagaaagcaa ctcatcatta cgttgcctag ttcacaagtg
     8821 gatcaagtgg cgttaaatgg gacagataca actatgactg tagatgcgtt tgaactagcg
     8881 catttaactt tgaacttaac aagagcagat ttgtatatgg atgacagtca tattcaacaa
     8941 ctcgctacgg ctatgaaaga cagtgcttta tatacggaac atactgactt taaaaaaatg
     9001 actgcaaaag tagatgctag tgatgttact ttagaggatg tctcactaga tattccgatg
     9061 tcttgggaga ttaataatgg tattgtggat gtcacttata aaggtcaact ttcgaataca
     9121 gcctttcata tcgatgggga tgagagagcg gtcgacttag atggtgttga aggactgaat
     9181 aataatcaag tcggtcgtgg tgagcatcaa gtcgatatta aagttacaaa ttatggtgat
     9241 gcgacatttt cagcatatga atagctgtcc atacattgga aaagatgaaa cggtatgatg
     9301 atttataaaa gtaaaaagca gatgactaag cataaaaaac gtatctattc ataaaaaata
     9361 atacgcgaga cttgtcaaag tgagataaaa gtgtataatc cttatcatga taataagata
     9421 ttgaggagaa agacatgtct aatgaattaa gaagtcaaaa acaatatggt gcactcgcgt
     9481 tattaccatt agtcatcttt ttagtattgt acattggtgt ggggcttgtg tttacaatgc
     9541 tcggcacaaa agatgcattt caactattac cgcgacatgt ggcgattttt attgcgattg
     9601 tcattgcatg gacgtgctac gatcgtaaaa cgcccatcac gcaaaaagtt aaaatattta
     9661 cggaaaatgc aggttcttcg ggtattgcag aacttggcct gattttacta ttagcaggtg
     9721 gttttgccag cgcggcgtca gcaatgggtg gtcaagaggc gatggtcaac ttgggcttat
     9781 ctattattcc gccaagttta ttgattcctg gtatttttgt gatgagtgct ttcgtcgcaa
     9841 catcaatagg gacatcaaca ggtacacaag ccgcttttat tccgattgga gttgctgttg
     9901 ctcaagcggc agacttaaat gtagcggctg cggctgcggc ggtcattgca ggggcttact
     9961 tcggagataa cttatctatt atttctgata cgacaattgc agcaacaaca ggtgtaggtg
    10021 cgaagatgaa agataagttt aaagcgaatt ttcttatcgc actgccagca gcgatcatca
    10081 cttttattat ttatgctatt gttggtggca cagggcatat taaaggtgat ttaagtttta
    10141 attttattga tgtgattcca tatttattcg tcctcattgc ggctattgct gcaatgaatg
    10201 tcatgctcgt gctcatttcg gggacggttt taacaggcat tattggtgtc gcacgaggca
    10261 atattggggt ctttgaatgg acttctaaaa ttggggaagg aatggaaggc acattctcca
    10321 tttttcttat cgctttctta atttcaggtt tagtcgcttt aattcgatac tatggcggta
    10381 ttgactggat tgtagaaaca atgaaaaaac gtgcaaatgg gccgaaaagt gctgaatatg
    10441 cgatgagctt tctatcggga ctattgtctg cagctttagt gcataatgtg gtcgcaatta
    10501 ttatttcagc acctatcgct aaagaactcg gtcaaatgta taaaattgcg ccgaaaagaa
    10561 tggccagctt gttagacatt tttgctgcga gtgcattgat ggtgttgcca catgacagcg
    10621 ggatgttaat ggctgaacag ttcggccatg tttcttattt tgaagtattg aagttttcgt
    10681 attatccact cattttaatt ttatgtgcgg tcatttcaat tcatattggt atgtttagaa
    10741 aacaaaagaa caatgctgtt gatgaataag cataacggtg tcgtgtcgtt gtaatgatgc
    10801 gcatagtaag aggttaggac attttgtgtc ttagcctctt ctttaaattt taccgccacg
    10861 tctcttcaat aggcgacatc tcactttttc gtcgatgtga tacatacggg ttccctttaa
    10921 cactataacg taaatgggcg gctgtccaat cgcctttatt cggaatgccg atacgtggtc
    10981 caatttcgat ttctcgcgga aactttctat ttttcgtatc aatctttaaa cgccccgtat
    11041 tcaattgact gccatcaata gaacgaggaa tttgcattgc agcggttaac tttcctgggc
    11101 cattcgttaa cgcgtagcct tgtcgaccgc gattacgttg catcatttca atgcctgctt
    11161 caggttgaat agcacggata agtacgcctt ctggaatacc ttgttcttgt gtaacaaaat
    11221 tgatgagcaa gtgacggtgc atgacatgtg cataaatggt cccgccctgt tgataaagtg
    11281 attcgacttt tggtgtgcga cgtccctgat agccatgtgc agcttgatct ttaaaaccta
    11341 aataggcttc tgtttcaaca atatagccac tgtaggtgat ttctggtgct tcataaatca
    11401 attgaacccc aagtaagttt tgagcggttt gaattgtcgg taggtgaata aaatccatag
    11461 ttgcctccat tttatttaat tatatgatgc tattttaccg gaaatcgcta taacattcca
    11521 aacggatcat acgatttaac ttggcggata aaatgataaa aaatgattaa tatactatag
    11581 caataaaagt agagtatggt agactagaag agaactacaa cttatttaag gaggtcaatg
    11641 aatttggaga cacctaaagt aggatttgtt gaagcattta aattatattg gacaaactat
    11701 gtgaatttta aagggagaag tcgtcggagt gagtattggt gggtcatgtt atggcatctc
    11761 atcattacga taccagcgtt atttttaggt gtggttttaa tgtttattcc ggttttaggt
    11821 tggattgttg cagtcatttt gtttctcgct attggcctat atggactcgc aacaattatt
    11881 ccgaatctcg cattaacagt gagacggttt catgacgtcg gattttcgat gttgattcca
    11941 attttatcgt ttattgttgg tattatttat aatatcgcta gtgctttcac gcaaaaagag
    12001 acgttgtacc aaaacacatc cacaggaact gatgtgagta ttattagtga atttgcattt
    12061 cttccaaact ggattgcata cacgttgatg gcgatcagta tcattttaag cttagtgacg
    12121 tttattgttt gtttattgga tagtaaagaa caagacaatc aatatggtcc ttcaccgaaa
    12181 tatggtcgtc aatatgtagg tgatgataga aatcttggca gcatggcgta tcaacaaagt
    12241 catcgcaatg acacaatgac gcgacaaggt gaaccgcgtg atattgaaga aacagaaaag
    12301 aaagatgacc catatcttta ttaacgaact gagtataaag acttttgcag tgttggtgct
    12361 gtaaaagtct tttattatat tgttaaaggt catgatgatt gaaggtatgc tgataaaaga
    12421 aaaaaggttg agacatcgaa tttttcatgt cacatctcta ttacgtcatt tgtcacatcg
    12481 atactttgta atttaaatgc gtcattttga caaatatact tgtcatattg taaagaataa
    12541 gttatattca atgtaagcca agtaaagaag gagtgtgtag caatgtcatt gaaaatcgag
    12601 caagtcacga agaaatttgg tcaatttacc gcagtgaatc agatttcttt tgaacttgaa
    12661 aaagggaaaa tgttaggatt tctaggacgc aatggggcag gtaaaacaac aactttccgt
    12721 atgattttag gattgtctga gccaactgaa ggacgtatta catataacgg tcgggtgatt
    12781 aatcatacca tgtacaatca tatcggctat ttaccagaag aacgtggctt acatccgaaa
    12841 ttaacagtga ctgaagagtt gacgtattta gcgacattaa aaggcatgga taaacccgcg
    12901 attcgtaaag cgattgatta ttggttggaa cgctttaaaa ttactgaaaa tcgtcataaa
    12961 aaaattgaag cactttcaaa agggaatcag caaaaagtac aattgttagc gagtatgttg
    13021 catgaacctg aattgttgat tttagacgaa ccctttagtg gactcgatcc agtgaacgtt
    13081 gagttgttga agcaagcggt aaaagatttg aatgcgcaag ggacaacaat catttttagt
    13141 tcacatcgta tggagcatat tgaagaactg tgtgatgcgt tgtgcatttt aaaacgtggt
    13201 gagatggtcg ttcaaggtga cattccatct gtcaaagcaa gtgtcggcta taaacgtgtc
    13261 gttgtggatg caccgtatga tttatcagaa gttgcgtcat taccaggtgt attacatcat
    13321 aaagtggtta aaactgaaaa ctccttcacg gtaacagatg aaacggtggc agaagctatt
    13381 ttgaagtcgt acaacaaaaa ggttacgcga agagatttca attgatggaa ccgacgatga
    13441 acgaaatctt tatcgagaaa gtgggggatt gagatgcgta agtttgctgc tacgtttaaa
    13501 ttgacgtatt ttaaaaagtt aaaagcaagg tcgtttattg tctcaactct cattatgatg
    13561 ttgattatca caggcgcggc gaatttcgat aaaattataa agcaattcga tggtggcagt
    13621 gaaaatgtcg cgattgtcac acaagacaac acattgtatc aacaagttaa agaacaaatg
    13681 gcgaccatta ataaagatgt ccattatgaa aaactgtcag aagatgaggc taaaaagcaa
    13741 atcaaacaag aaaaaattga tcaagcgtat gtgattcatg aagataaaca acatgcatta
    13801 acagggacga ttttaagtac atcgtcacct tctgacagtg ataaagggac attacaagct
    13861 atattgacgc aacttcaaac gcaaaaaata gcacaagatc tcggtttaca aggagatgac
    13921 ttgcaaaggt tacaaagtca aagtcaaatc gacaatacaa tcattcaaaa agcaggacaa
    13981 gaaaatagta gtgcgtctga ggatgaacaa gatttcgcaa aaattattgc gatgttaggc
    14041 acatttttaa tgttctttat cgtctttaac tatgcacagc aaatcgctac agaagtggct
    14101 acggaaaaaa cgtcacgtgt gtcagaaatg attattacta gtgtgaaacc gacaacacat
    14161 attatggcaa aaattgcagg cgtattagca cttgcattta cacaaatcgt tattttagcc
    14221 ctaacatttg tagcaaatta cattattttt gatttgcaat cgatgttcgg ttcagtgaat
    14281 ttaacgctca catcacactt aacaagattg attgttttcg gtgttatttt cttaattttg
    14341 ggcattttga gttttgttat tttagcagcg atactcggta atttaactgc ccgtattgaa
    14401 gatttagcac aatcgttaat gccaatgacg ttcttaatct tggcagcgtt ctatgcaggt
    14461 tattttggct cattcaatcc tgacaacgtt tttattcaca ttatgagtta tgtgccattc
    14521 ttttcgccat tcgtgacttt ctcaagatta gcgttaacga cgacaccaac gtttgaagcg
    14581 attatcgcag ttattatcca tattgtactt atcggtgtat tacttttcct tgcagctaaa
    14641 tcatataaaa atgcagtatt atcgtttgaa aaaggttgga aaaatgtatt aaagcgtgcg
    14701 tttcaacgtg aacagtaaaa tttgaagtga tgaaggacta tcgatgcaac ttgtgtcggt
    14761 agtctttttt aatggttaga aataggggtt gcgtgacaca ttaagaaata attacccact
    14821 tgttattcgg aaactgatac aatagagtaa aagtaatatg aggtgaagaa gtgaactttt
    14881 tatattccac agcaattttt atcatagcgg ggttgtgtga aattggcggt gggtatctca
    14941 tatggctatg gctacgtgcg gatcgtccat tttggcttgg atggataggg ggaatcgtat
    15001 tgattttata cggtatcgtt gcgactttcc aaacatttcc tacttttgga cgtgtgtatg
    15061 cagcttatgg cggcgttttt atcgtcatga gtctattatg ggcgtatttg attgataaag
    15121 agccaccaga taaatttgat atcatcggcg gcgtggtttg tatcataggg gttttaatca
    15181 tggtgttgcc ggcaagaggg taaaccttgg gagagcgtaa aggagtaaag aatcgcaatg
    15241 aatattaaca ttgaacaaca atctaacgga attgaactca ttaagattga aaataaggaa
    15301 agtaaaattg ttttcatgaa ttatggtgcg cgcattgtca gttggaaaat tggagataat
    15361 aacattgtac tggggaatga agtggaagcg gatgaatttt atcctcacaa tccattttat
    15421 ttcggtgcaa cggttggacg ttttggggga cgtattgcga aaggtcaatt tgaattaaat
    15481 ggacaaacat atcaattaga acaaaatgat ggtgacaatc atttacatgg cggactacaa
    15541 ggattatcta accgcttatt tgattatgaa atcattgaaa gcgaaactga agaaagcgcg
    15601 caagtttatt ttacgactac agtgaagcag gatgaagatc attacccggg aaatatagac
    15661 attaaagtcg tgtttacgta tgatgcttcg aaaacgtgga cagttgaata ttttgcggag
    15721 tctgatgcgg atacattgtt caacccgatg aaccacgttt actttaattt gaatcgtgac
    15781 aacaaagttg tggataatca cgtcattgca agtgaaaaac tacagatgtt tcctttggac
    15841 gcgtcgggta tgccagtgtt agagccggtt gatttagcag caataatggg cagtcatgaa
    15901 attgaacttg cgacattatt caataccgga gatgtccata ttcaacaaca agtcacaacg
    15961 cgtggtggtc tcgatcatcc atttgaagtg aaggatggca agatgacgat ttcaaaccgt
    16021 gacttagtat tacatgttga gacagatgca ccacaaattg tgatgtacac gttaaatgat
    16081 tctgaagatt ggaaaagccg tatgaatatt tttaaaccac attcagggat tacgatagaa
    16141 acacaaagca taccgaacga tattaatctt ttaggtacat cagcacattc agtgttaaaa
    16201 gcgcatacac ctttttactc taaaacaagt tatcatgtgg aattaaagcc aagaaacgca
    16261 tagacttttt atgaataagc atgaaaaagc tgggcaactt cattgtgacc cagctttttt
    16321 catacatctt tcatttattt cattgtggct tgtgcgagca ttttttctaa tacgcttttt
    16381 cgtttttctg tgaggtaagg gttgttgagt gcataagcaa tacgttcttt gttttttcta
    16441 tcattgtagt aaatgtcatt taactcttgc acagataaac gcgtaggttc aggtgcatgt
    16501 tggactaacg ataaattact gtttggagaa acgaagcctt ctttaatcac acggaaataa
    16561 cagccagttt ttcctgattt tgacatgtct ttaacgagtt gagaatagcc atatttgctt
    16621 tgaagtttcc agcatggctc gcgaatttct gacacttcga taatcgcttc acctaaacga
    16681 tattgatcac cgaaaaagag ttctgtttca tcaatagcat acacagtaat gttctcgcca
    16741 aatagcgctg aatcaggtaa gggttgaatc acgtcttgcc acatggcata gttcgattta
    16801 ctgtataaac aaaccgcttt gtcgggaccg ccatgatctt tgtactcttg ttcatcttct
    16861 aaaaatcctg tccgagaaag ccacattttt tcttggatgg gctttttatt caaagcactt
    16921 ttcataggac gtctgtcttc gtattgcaat gattcgattt tgccagtcga tatcgcataa
    16981 attgcataat tcattgaaat caccctccat cctagtctta ctttaatttt agcctaattt
    17041 gttgcgttcg tcatggtttt tcggcgtaaa tgttgtacaa taatgttaat ataataagtt
    17101 acaatgaagg agtgggctca tgagtaataa gcagcttaaa ttaatgacgc tagatgaagc
    17161 tgttagtcgt attgaagacg gcatgacggt tgggattggc acaggcagta cagtagagtt
    17221 acttgtgcct aaaattgcgg gattgattca tgaaaagggg taccaattga ttggcgtgtg
    17281 tacatcagaa cgcacagaaa atcaagcaaa atcattgaac attccaattg cacatattaa
    17341 tgacgtacaa catatcgata tcgcgataga cggtgctgac gaaatcgatc caaaactgaa
    17401 cctgattaaa ggtggcggtg gtgcattgtt ccgtgaaaaa gtcgtggata ctttcgctga
    17461 ccgatttatc gtcattgctg accaatcgaa actggttgat tatttaggtc aaacttttaa
    17521 attgccagtt gaagtagacc gctttaattg gaaacaagtg gtacagttaa ttgaaaaaaa
    17581 atatgaaatt gaagtgacac gtcgaatgat ggaacataca ccgtttatta cagataacgg
    17641 caactatatt ttagattgtg ctttaaatcg agaaattgat ccgtatcaag tgcatgagtt
    17701 tttaatccat ctcgttggtg tgttggagac aggttacttt ttagatacag tagaagaagc
    17761 gattgtggga acggaacaag gcgtgaaact cattaaactg tcagatatta aataaaaatt
    17821 ataggaggag gctgggattc aggtgaagtt atcccagcct ttactatata tcatcaacgt
    17881 tataaaaacg tatagtattc aacaacgatg acttcatctt ttcattaaca gtggatgaaa
    17941 tgtcctaaaa agtgtgctgc caactttgct gtacgttgat cgatatcata ttttggatta
    18001 gtttctgcaa tactgattga agtgactttg tcagattgta aaatacggcg tccaagctct
    18061 aaaacagtga aaggtgtgag tccaagaacc gcattcgcac tgacacctgg ggcataagca
    18121 ctatcaatga catccataca aattgtaaat aaaatgacgt cgtgttggtt gatgaaatga
    18181 tcgagtttat ctttgactgg cggacaaatt tgacccatta attcttctgc aaggacatat
    18241 tgcgtatttg ttttgtcagc gtaatcgaac aaggcttgtg tattgcttgt acgctgaatg
    18301 cctaacacga aatagtctaa atgctcatct tctgttaaca tttgatgaaa acttgtccca
    18361 gatgtagaat aaccttcttg tcgattgtca aaatgcgcat cgatgttaat cacaccgatc
    18421 gattgttctg gataagcttc acgaacacca agatattgtg cgtacgcaat atcatgtccg
    18481 cctccgagta gaaatgtgcg gtgatgatga cgtaataatt gtgcaacata atgaccgtac
    18541 gcttgttgag aggtgattaa atcttcggcc gagtgtgtcc agttgccata ttcgattatg
    18601 tttaaatctg ttgaagcggg caaacctgca aatgcacttt taatcgcatc cgggccttca
    18661 cttgcgccca cacgaccttt atttaagcgc acaccttcat cgatagcata tcccaataac
    18721 gcaatgtctc catcttgagg tgcttcatgt tcaaggtcga caaattggac agtttgaaaa
    18781 tgacggaatg cttggcggtc tatctcactg tctagacgac ctgtccacaa cttttgattt
    18841 ggtttttgat acataaatcg gacccctttc atattcacta acaattagtg ataacccatg
    18901 tgtcacttcc atgctactat ttttaaaaca taaattccaa gaaaaaagta agcgctttaa
    18961 atcaaaggga tgatagaaaa gggcaagtta aacaaaatac tatatcaata gcatctaaaa
    19021 tttctatgtc ccattc
//
LOCUS       DANHPA010000047        18619 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.047, whole genome shotgun sequence.
ACCESSION   DANHPA010000047 DANHPA010000000
VERSION     DANHPA010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 18619)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18619)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18619
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.047"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(181..984)
                     /locus_tag="PTC28_001299"
     CDS             complement(181..984)
                     /locus_tag="PTC28_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen family hydrolase"
                     /protein_id="HDK5716589.1"
                     /translation="MQIQLFQINVAIANSRQNEQKIATLFEQHLDDQTDVVVLPEMWN
                     NGYALPQLDKLADEDLAQSYAFIQKLAQNYQVDIVAGSVSNRKEGAVYNTAFAVNRRG
                     EKIYEYDKIHLVPMLDEPDFLTCGKSVPYPYSLSDGTSVSQIICYDLRFPELSRYPAA
                     QGAKVMFYVAQWPEVRLTHWRQLLQARAVENDMYVVAVNGSGHDGKTTYAGHSMVVDP
                     NGEIIAEADENETVMTVTLDLQKVDTQRRAIPVFENMRPSVYRYAQKEI"
     gene            1149..2510
                     /locus_tag="PTC28_001300"
     CDS             1149..2510
                     /locus_tag="PTC28_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716590.1"
                     /translation="MVEYKKEHSVKRLLKLGIGSTSILCVVSPLLLTHDVVQAADINN
                     RMPALNTLKTTSSYDQRAHMDELRSAITSDSDTTQTPSFNEITVSSTNETDAASTENV
                     NPSDEVSAKDESESTAPSTEQDTSIEETGTEEVPSHEDNHHNTPSQEEQPSPPDQPGT
                     NKDEESGEKPNKENHRKPNQPNKDQPSKDENKKPDKGNKPAPPSKAPNRPDQKEEGSN
                     NTPPPATDNGGNSNDGTTTGPNGGGGSEASPPPNEQPSNGNASDTHQNGSVSSTNHSN
                     QYGTSAYDEYAGLLNNNYKYNPLFKEEVARLSQFGSQDQHDIASLSRKEQFSQNAFLD
                     DLQQSTDYFRYQYFNPLSTEQYYHRLDKQVLALVTGEFGSMPDFKKSGDKSLVNKHQQ
                     DKVKKIEQQGENINTHHMKNTKEDTGKSLSYKPMIYIGIVMVGFVGLISMILWKRLHH
                     FWK"
     gene            complement(2622..3389)
                     /locus_tag="PTC28_001301"
     CDS             complement(2622..3389)
                     /locus_tag="PTC28_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HDK5716591.1"
                     /translation="MKRFWVSLLTVVLYILAQISPYIARAVGWIQTGNQAQLLRQSIA
                     VQFTAFIIVAILIIILQFFVKNKLNFELGPKEKKRYVLPYILVGLVIVFIAQMVVNLI
                     SVQLFGANPASENTLRIMKIARQMPIFIVLIAIVGPLLEEFVFRKVLFGELYNAIKAN
                     QWVKFTIATTISSAVFAVVHMDFSHFLAYFVMGIIFSAFYIYTKRLSVSIGIHMAQNG
                     LVALIQLMMPEKMIEEAVKQTQFILLLTSHWMSFFLS"
     gene            3559..3846
                     /gene="groES"
                     /locus_tag="PTC28_001302"
     CDS             3559..3846
                     /gene="groES"
                     /locus_tag="PTC28_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HDK5716592.1"
                     /translation="MLRPLGNRVVIEKKEHEQTTKSGIVLTDSAKEKSNEGVIVAVGP
                     GRILDNGERLKPELNEGDRVVFQQYAGTEVKRDDKEYLVLTEDEVLAVIED"
     gene            3895..5514
                     /gene="groL"
                     /locus_tag="PTC28_001303"
     CDS             3895..5514
                     /gene="groL"
                     /locus_tag="PTC28_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500736.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HDK5716593.1"
                     /translation="MAKELKFSEDARQAMLRGVDKLANAVKVTIGPKGRNVVLDKEFT
                     APLITNDGVTIAKEIELEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEG
                     LKNVTSGANPVGIRQGIDKAVAVAIESLHNISQKVENKEEIAQVGAISAADEEVGRYI
                     SEAMEKVGNDGVISIEESNGFNTELEVVEGMQFDRGYQSPYMVTDSDKMIAELERPYI
                     LITDKKISSFQDILPLLEQIVQSNRPILIVADEVEGDALTNLVLNRMRGTFTAVAVKA
                     PGFGDRRKAMLEDLAIVTGAQVITDDLGLELKEATLDMLGTANKVEVTKDNTTVVDGD
                     GDTANIDARVGQLKAQIEETDSDFDREKLQERLAKLAGGVAVIKVGAASETELKERKL
                     RIEDALNSTRAAVEEGIVAGGGTALMNIFKDVQAIEAEGDEATGVNIVLKALQAPVRQ
                     IAENAGLEGSVIVERMKNAEPGIGYNAATDEWVNMLEAGIVDPTKVTRSALQHAASVA
                     AMFLTTEAVVANIPEDKGNDMPQMGGMPGMM"
     gene            5924..6346
                     /locus_tag="PTC28_001304"
     CDS             5924..6346
                     /locus_tag="PTC28_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDK5716594.1"
                     /translation="MNIKLVNTFDDRDLDSIYKTYHSVGWMNHNKDNIRSILKNSTHV
                     VFALHNDKVIGVGRALSDGVFNAAIYDVIVRPEYQNLKIGSRIVNDLLEQIGDVSCIH
                     LISTSGKLDFYRKLGFSKLKTGMAIYQSEKLKIEYTES"
     gene            complement(6525..7757)
                     /locus_tag="PTC28_001305"
     CDS             complement(6525..7757)
                     /locus_tag="PTC28_001305"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HDK5716595.1"
                     /translation="MEQRQFDILQTLIAHPTVSPPARNTVLLQLQIASWLEDIGFEVQ
                     TIPFYDNDCIVVGTLKGRNPEAARLILNGHVDVAEVEDEQFWRFNPFQLTAEDNFLFG
                     RGVADMKGGMSALFYNLERLHQEGLQPEGDIIVHSVVGEEVGEAGTKVACEHSPKADL
                     ALVLDTSNNIAMGQGGVITGWITIQSEETIHDGARSHIIHAGGGRHGASAIEKMIKII
                     QALQELERHWAVTKSYPGMPPGANTINPAVIEGGRHPAFIADQCRLWITVHYLPDESY
                     ATIIEEIETYLNKIADSDLWLSQNPLQFEWGGASMIEEKGEIFPSFTLPTSHPGFHML
                     AKAHEDVHQAPLQTTMSTTVTDGGWTADFGIPTILYGPGELDEAHGTNEKIRIQDLDY
                     FTEVLYTFLKSWYEKPER"
     gene            complement(7738..8259)
                     /locus_tag="PTC28_001306"
     CDS             complement(7738..8259)
                     /locus_tag="PTC28_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HDK5716596.1"
                     /translation="MSFYFQHIDTPLGLMTAVVNDDALLGLSFTDSKDYHTALKHFQK
                     QARLIQISYHPIVNQIALELEAYFHGHCHTFKTPVAHVIGTPFQQQVWQALQQLPFGA
                     VVNYSDIAQMIGRPKSVRAVASAIGQNPLSIIVPCHRVLRKDGQLGGFNSGLHRKKRL
                     LALEGHPYGTTTI"
     gene            complement(8275..9099)
                     /locus_tag="PTC28_001307"
     CDS             complement(8275..9099)
                     /locus_tag="PTC28_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HDK5716597.1"
                     /translation="MDIQSRQPQQFLTKASGYLKDYTHTLNPYMGCQFACTYCYVRRS
                     PISLFSGKTWGDWVTAKTDEQLKFRKELQKNKAKGPFTVFMSSSTDPYQPLEKKYEMT
                     RYLLSEMHDCPPDFLFIQTRSPLIQRDIDILQSYPGNFIVSMTVESDREDIIRHFTPK
                     APSIQSRLKTVDKLRAAHIPTQIAVAPVLPCTNQFGERLAKHVDRVTIDDYFMGDGSN
                     GRRTQSLGIQSLYEDFDLQSWYHPDTYLHVLKLMQDAFPHDNIAISSNGFVPFQSN"
     gene            complement(9158..10447)
                     /locus_tag="PTC28_001308"
     CDS             complement(9158..10447)
                     /locus_tag="PTC28_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDK5716598.1"
                     /translation="MNPLALQLNEQLSEENPVVLDMLSDLGTNMYYPKGILTQSAEAK
                     ATKYNATIGMATTAEGKMYTETLYGMFDHLTTDEVFAYAPPQGLAELRELWQQKMLKE
                     NPDLTQEAMSLPIVTNALTHGLSLIGDLFVNPGDTVLLPQHNWGNYNLVYGIRHQATM
                     QTYPIFDAQGHFTIEHLVKTLDQFEEDKVIMLLNYPNNPTGYTPTTDEVEAIVQAIDR
                     LAKRGVNVVAVVDDAYYGLFYEDVYTQSIFTALTRLNNERVLPIRLDGATKEFFAWGF
                     RVGFLTFGTTNDTTKTVLEAKMKGLIRSNNSSGATPSQAAVQHALKQGASFNDEVQHN
                     IQILQARYEVTKELVYDEAYQSLWQPYDFNSGYFMALKVKGVNAEELRVHLIEKHSIG
                     IVALNETDIRIAFSCIEKEDLPHVFKSIATAIETLQA"
     gene            11051..11224
                     /locus_tag="PTC28_001309"
     CDS             11051..11224
                     /locus_tag="PTC28_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716599.1"
                     /translation="MKHLTKVFVIIALLIFVIGIILQFLGEETSAIKLFIATILFMIC
                     AFISRHNDRKKQR"
     gene            11668..12543
                     /locus_tag="PTC28_001310"
     CDS             11668..12543
                     /locus_tag="PTC28_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5716600.1"
                     /translation="MELKQITKQYGNNTVIDRVDFAFNDSKIVGLIGKNGVGKTTLMK
                     IMNGNIINYQGDVQVVNDDKIGYLIEHPKLYDNKSGLYNLKLFAQVLGTGFDKAYTNH
                     IIKAFGMESYIKKKVKKYSMGMKQKLAIAVSLMNKPKFLILDEPTNGMDPDGSIDVLK
                     TIEQLVQQLDMKILISSHKLEDIELICDRAVFLRDGHFVQDVNMAEGQSTAQTIIQVD
                     PDDFEQALYYLTDHFKVVQSQKESGEIILNVQSDYRNFLKGLAQKGIFPQYIETRKVS
                     LRDTYFNINQRGGQS"
     gene            12540..13268
                     /locus_tag="PTC28_001311"
     CDS             12540..13268
                     /locus_tag="PTC28_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDK5716601.1"
                     /translation="MNILQLFKFDIVSILKSPLTYLAILLGIAPLLITVIILVTNDNP
                     VNANTMFSVGKWFFSLIGLLFVIKTITRDTAQGTIQLFLNQTQSRIGYFIAKTLSIIF
                     ISIFTTAVVVLVTYLIQWSTDGKDLDNDQSWKLLVFYLILFFVYGLLLFLINLIVQKP
                     ALVYTLGILLLLLLPVVKPFIPLIPEIGDNIQDSLKYIPFSYLSDKTLGNGVTFTNWQ
                     WVINVGSIVVLWLANLTLIAKKDI"
     gene            13686..14363
                     /locus_tag="PTC28_001312"
     CDS             13686..14363
                     /locus_tag="PTC28_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDK5716602.1"
                     /translation="MEIPKQWLTYLSKGEAIAATLRLSIMSGERATHKLLTENQVANE
                     FQVSRSPVRDAFKILAQERLIRLERMGAEIIPFTDKQRQELTDIRLMIESFAFTKVIQ
                     RSDWMEIVQSMQQALAMMQVNIQYKDAASFAENDLKFHELMVLACDHHYLTHLWQQIM
                     PTMLCLNYMSMKKRMDENFEDFERVIQNHELFVTAIAQKDRKMMYEAFEANFNDLNND
                     IGAFWAQ"
     gene            14387..15937
                     /gene="gntK"
                     /locus_tag="PTC28_001313"
     CDS             14387..15937
                     /gene="gntK"
                     /locus_tag="PTC28_001313"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HDK5716603.1"
                     /translation="MEKYMIGVDIGTTSTKAVLFNTDGGVQQKAQIEYPLHTPRVDVS
                     EQDPDIIVNAVTETIAEVVRKGDVQHEALQFISFSAQMHSLLLIDEFEHPMTKSMTWA
                     DNRARFAAEDLLNHHDGHGIYQRTGTPIHAMSPLSKLWWLKQDENELFETATRYVDIK
                     SYVLYQLTGEWVMDASIASATGLYHLQNKTWDEKVLALLDIPPSKLPTLVSTTHQLRL
                     KDDYIAEKLGLRRDLPIIAGASDGVLSNLGVNSFEPGDVAITIGTSGAIRTVVDHPVI
                     DEKGRIFCYVLDDEHYVIGGPVNNGGVVLRWLRDELLASEIETAKRLGIETYDVMSRI
                     AQNVQPGAQGLLFHPYLTGERAPLWTSDARGSFIGLTLSHQKEHMIRAVMEGVLFNLY
                     TVFLALIEVIGTSPQSIKATGGFSKSHLWRQMMADIFNTNVEIPKSYESSCLGACVLG
                     LKALRQIDNYDIVKSWVGATHQHHPEAVHVNVYQKLASIFIQISRDLSPSYQTLAQFQ
                     RDLENNKE"
     gene            15948..17309
                     /locus_tag="PTC28_001314"
     CDS             15948..17309
                     /locus_tag="PTC28_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate permease"
                     /protein_id="HDK5716604.1"
                     /translation="MFQEIWPLLSVAIAIIVLLILIMKLQLNTFVALVITAMVTGILL
                     GMPFDKIVATIETGMGGTLGHIALIFGLGAMLGKLLADGGGATQIADTLIAKLGKKYV
                     QWAMVIASFIIGIALFFEVGLVLLIPLVFTIAKRMNVSQLKIGMPMVTALSVTHGFLP
                     PHPGPVVIAKELGANIGEVLLYGFIVAIPVTIIAGPVFAKIAPRLTPTAFQREGDISS
                     LGATKSFKDEELPSFGLSTFTALLPVLLMLFATLWQLISGHEGKAHNTLESMIYFIGS
                     AGTAMLIAVVFAVFSMGIRRGIPTKQVMNTLTQAIYPIGMMLLIIGAGGAFKQVLIDG
                     GVGGAIEKIFTDVNISPILLAWLVAAILRLALGSATVAAISTTGIVLPLLQTADVNLA
                     LVALAIGAGSIFCSHVNDAGFWMFKEYFGLTVKETFLTWSLIETIISVSGLVFVLFIS
                     LFV"
     gene            complement(17397..17954)
                     /locus_tag="PTC28_001315"
     CDS             complement(17397..17954)
                     /locus_tag="PTC28_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDK5716605.1"
                     /translation="MAHLRTYYAEAKPFEQYIQDMEQNQTELLNIYKDFDMPTDDERI
                     EKIKDSGYKYVLVITEDWCGDAMMNNPILKHIAEQANLEVRVFHRDDNTDLIDQYLTN
                     GKSRSIPIYIFMNEKFEQKAVWGPRALNVQKFVEALRKASLPDKTDPSFEEKQKEVHL
                     KIRERYLTDASFWHDVYESIMSRLV"
     gene            18134..>18619
                     /locus_tag="PTC28_001316"
     CDS             18134..>18619
                     /locus_tag="PTC28_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1700 domain-containing protein"
                     /protein_id="HDK5716606.1"
                     /translation="MDKITFLNELEYQLHRLPNHVVDEVMNEYENHFYREGLDGKSDE
                     AIVNALDTPKQIAKQHYAKYAVKNAEKKPDVTHLVRAVFATIGMSMITLFFIVIPLFF
                     VGLLLLIGTFLALGMLLSPLLLLITDVWSGMFSFSLSNYLYSFAYLGLGMMFIVMIVK
                     LI"
BASE COUNT         5932 a         3219 c         3793 g         5675 t
ORIGIN      
        1 tcactaaatt ttttcataat taataacatc cccaattaaa tagaataact gtaaataaaa
       61 cattccctta atatgaagaa caggcgagtc cctcccaagc tcgtctgttc atttttattt
      121 gatgctcatg ataaaaaaag gcgttacttc tcttgaataa gagaggtagc gcctcatatt
      181 ttatatttct ttttgtgcgt agcgatatac agacggtcgc atattttcaa aaactggaat
      241 agcacgacgt tgtgtgtcta ctttttgaag atctaatgtg acggtcatca ctgtttcatt
      301 ttcatctgct tcagcgatta tttctccatt tggatccact accattgaat gacctgcata
      361 cgttgtttta ccatcatgac cactgccatt gacagcaacc acatacatat cgttttcaac
      421 ggcacgtgct tgtaataact gacgccaatg tgtgagtcga acttcgggcc attgtgcgac
      481 ataaaacatc acttttgcgc cttgtgctgc agggtaacga ctcaattctg gaaagcgtaa
      541 gtcataacaa atgatttgag aaacacttgt accgtcagag agcgaataag gataggggac
      601 agacttgcca caggttaaaa agtctggttc atctaacatc gggacaagat gaattttatc
      661 gtattcataa attttttcgc cacgtcgatt gacggcaaag gctgtattgt atacggcacc
      721 ttcttttcgg ttagaaacag atcccgcaac aatgtccact tgataatttt gtgctaattt
      781 ttgtataaaa gcataacttt gtgctaaatc ttcatctgct aacttatcta attgaggcaa
      841 tgcatagccg ttattccaca tttcaggcaa gactacgaca tccgtttgat catctaaatg
      901 ttgttcaaat aacgtagcga ttttttgttc gttttgacgt gaattagcga ttgcgacatt
      961 aatttgaaat aattgtattt gcatcgtcat catcctcatt tctgaattaa tcttagtgta
     1021 ctaaatgatg aacggtttaa caaaaatctt aattgaatac aatcatatat acatgagggt
     1081 ggtaatcgta gtcacttttg tttatactgg ctttgttaaa aaactttaaa caatcagagg
     1141 tgaatctgat ggtagaatat aaaaaagaac atagcgtaaa gcgactatta aaattaggaa
     1201 tcggttcaac gagtatttta tgtgttgtat cacctctttt attaacacat gacgttgttc
     1261 aagcagcaga tatcaataac aggatgccag ctttgaatac attgaagacc acttcatcat
     1321 atgatcaaag ggcacacatg gatgaattac gaagcgccat tacttcagat agtgacacta
     1381 ctcaaacacc atcattcaat gagataactg tgtcttcaac taatgaaacg gatgcagcgt
     1441 caacggaaaa tgtgaacccg agtgatgagg tctcggcaaa ggatgaaagt gaatcaacgg
     1501 caccgagtac agaacaagac acatctatag aagaaacggg tactgaagaa gtgccatctc
     1561 atgaagacaa tcatcacaac accccaagtc aagaagagca accgtctccg cctgatcaac
     1621 caggaacaaa caaagatgaa gagagtggag aaaaaccgaa taaagaaaat catcggaagc
     1681 cgaatcaacc gaacaaagac caaccttcaa aagatgagaa taaaaaacct gacaaaggaa
     1741 acaaaccagc accaccgtct aaagcgccaa atcgcccgga tcaaaaggaa gagggttcaa
     1801 acaacacccc accacctgcc actgataacg gtggaaacag taatgacggt acaacaacgg
     1861 gtcccaatgg tggaggtggc agtgaagcaa gtccaccacc gaatgagcaa ccgtcaaatg
     1921 gcaatgcaag cgatacccat caaaacggtt cagtttcaag caccaatcat tcgaatcagt
     1981 atggtacatc ggcttatgat gaatacgcag gtttattgaa taataattat aaatataatc
     2041 cattgtttaa agaagaggtt gcgcgtttaa gtcaatttgg aagtcaagac caacatgata
     2101 ttgcaagttt gagtcgtaaa gaacaatttt ctcaaaatgc atttttagat gacttgcaac
     2161 aaagtacaga ttattttaga tatcaatatt ttaacccgct ttccacagag caatactatc
     2221 atcgtttaga taaacaagta ctagcactcg ttacggggga atttggttcg atgccagatt
     2281 tcaagaaaag tggtgataag tcattggtta ataagcatca gcaagataaa gtgaagaaaa
     2341 ttgaacagca aggagaaaat attaatacgc atcatatgaa aaatacgaaa gaagatacag
     2401 gaaaatcatt aagttacaag ccgatgattt atattggtat tgtcatggtc ggttttgtcg
     2461 gcctgatcag tatgatttta tggaaacgac tgcatcattt ttggaaataa atcaaaaaag
     2521 ggttaggccg ctttaactaa agtcgtctta accctttgtg cattgtaaaa aataaatatg
     2581 aagtatttaa aagtaatttt gtgaagcaga acgtgtatag tttatgaaag gaaaaaagac
     2641 atccaatgcg aagtcaataa aagaatgaat tgtgtttgct taacggcttc ttcaatcatt
     2701 ttttcaggca tcatgagttg aatgagtgca accaaaccat tttgagccat atgaatacca
     2761 atcgacacac tcaaacgctt tgtataaata taaaatgccg aaaagatgat acccatgaca
     2821 aaataagcta agaaatgtga aaaatccata tggacaacag caaatactgc agaactgatc
     2881 gtcgttgcaa tcgtgaattt gacccattga ttcgctttaa ttgcgttata cagttcacca
     2941 aacaatactt ttctaaagac aaactcttct aataatggtc cgacaatcgc tatcaacaca
     3001 ataaatattg gcatttgacg agcgattttc atgattctta acgtattctc gctcgcagga
     3061 ttagccccaa atagttggac agaaatgaga ttcacaacca tttgtgcgat aaacacaatg
     3121 actagaccta ctaatatata gggtagtaca tagcgttttt tctcttttgg accaagttca
     3181 aagttcaatt tatttttcac gaaaaactga agtatgatga ttaaaatggc gacaatgata
     3241 aaagcagtga actgaactgc tatcgattgc cgcaacaatt gtgcttggtt gcctgtttga
     3301 atccagccaa ccgcacgtgc aatataaggt gatatttgtg caaggatgta tagtactacg
     3361 gtgagtagtg aaacccaaaa tctcttcata attagcctcc gttcaatctc ttttattcta
     3421 acggaaaata aaggtatgga caatggcttt aaaggtaaac gcttgaaatt ttgaccaatt
     3481 ttgattatta tagaattaaa ttagcactca atatatgaaa gtgctaaatt gatgttgaac
     3541 ataaggaggc actcatacat gcttagacca ttaggaaatc gtgtagtcat cgaaaagaaa
     3601 gaacacgaac aaacaacgaa aagtggtatt gttttaactg attcagctaa ggaaaaatca
     3661 aatgaaggtg ttatcgttgc ggtaggtccg ggacgcattt tagacaatgg tgaacgtctc
     3721 aaacctgaac tcaacgaagg cgatcgtgtt gtgtttcaac aatatgcagg aactgaagtg
     3781 aaacgtgacg acaaagaata cttagtgtta actgaagatg aagtgttagc tgtgattgaa
     3841 gactaatcaa acattgaata taaaacaaat gaatccaaca acggaggtaa tagaatggca
     3901 aaggaattaa aattctctga agatgcacgt caagcaatgt tacgtggtgt cgataaatta
     3961 gcaaatgctg ttaaggtgac aattggtcca aaagggcgca atgtcgtact tgataaagaa
     4021 tttacagcac cgcttattac gaacgacggt gtaacgatcg caaaagaaat tgaattagaa
     4081 gacccttatg aaaatatggg tgcgaaactc gttcaagaag ttgcgaataa aacgaatgaa
     4141 attgcagggg acggtacgac aacagcgact gtacttgcac aagcaatgat tcaagaagga
     4201 cttaaaaacg tgacaagtgg tgcgaaccca gtcggtatcc gccaaggtat tgataaagct
     4261 gtggcagtcg caattgaatc attacacaat atttctcaaa aagttgaaaa taaagaagaa
     4321 attgcacaag tcggcgcgat ttctgcagca gatgaagaag tgggtcgtta catttctgaa
     4381 gcaatggaaa aagttggtaa tgacggtgtt atctcaattg aagaatcgaa cggttttaac
     4441 acagaactag aagttgttga agggatgcaa tttgaccgtg gttaccaatc accatacatg
     4501 gtgacagatt ctgacaaaat gattgctgaa ttagaaagac catacatttt aattactgac
     4561 aagaaaatct cttcattcca agacattttg cctttattag aacaaattgt gcaatccaac
     4621 cgtccaattt taatcgtagc ggacgaagta gaaggcgatg cgttaacaaa ccttgtctta
     4681 aaccgtatgc gtggtacatt tacagcggtt gcagttaagg cgcctggttt cggtgatcgt
     4741 cgtaaagcaa tgttagaaga cttagcgatt gtaacaggtg cacaagtgat tacagatgat
     4801 ttaggtcttg aattaaaaga agcgacttta gatatgttag ggactgcaaa caaagttgaa
     4861 gtgactaaag acaatacaac agtggttgat ggagatggtg atactgcgaa catcgatgca
     4921 cgtgtaggtc aattaaaagc acaaattgaa gaaactgatt ctgactttga tcgtgaaaaa
     4981 ctacaagaac gtttagcaaa attagctggc ggtgtagcag tcattaaagt cggtgcggca
     5041 tctgaaactg aattaaaaga acgtaaatta cgtattgaag atgcattaaa ctcgacgcgt
     5101 gcagcggtag aagaaggtat cgttgctggt ggaggtacgg cattaatgaa cattttcaaa
     5161 gacgtccaag caatcgaagc ggaaggtgac gaagcaacag gtgtgaacat tgtattaaaa
     5221 gcattgcaag caccagtacg tcaaattgct gaaaatgcag gacttgaagg ttcagtcatc
     5281 gttgaaagaa tgaaaaatgc tgagccaggt atcggttaca acgctgctac agatgaatgg
     5341 gtgaatatgt tagaagcagg tatcgtggat ccaacaaaag tgacgcgttc tgcattacaa
     5401 cacgcagcaa gtgttgcggc aatgttctta acaactgaag cggtagttgc aaacattcct
     5461 gaagataaag ggaatgatat gccacaaatg ggcggcatgc caggtatgat gtagtaggac
     5521 tattagacgt ctttacatca atattctaat ggttgaacat taatgatttg aatcaaaaat
     5581 ttgtgacgct ttccaattga tatcgcatct tttgggaagc gtctttttta catgatgttc
     5641 aattgattac caactgaatt acaaaatttg cttgaaaaac tgtgtgatat tgagatatat
     5701 tttacttcaa atgacatttc tgaggaacgt aagtattttt attatcaaat ctagtgaact
     5761 caatcaatat gacaaaatat catgaaacgg tggcaaatat tcctcgttat gactgtaatt
     5821 acttcgagca aatgtatcga taaatgtttg taatgtgtac taaaaggaga tgatgaattg
     5881 tggcaagggg cagtgaatca tttataaagg agaagggcct agtatgaata taaaacttgt
     5941 taacacattt gatgataggg acttagattc tatttataaa acttatcact ctgtaggttg
     6001 gatgaatcat aacaaagaca atattagaag tatattaaaa aatagtacgc atgtggtatt
     6061 cgctcttcac aatgataagg tgattggcgt aggtagagcg ctatctgatg gtgtttttaa
     6121 tgcagcaatt tacgatgtga ttgttagacc tgaatatcaa aatttaaaaa taggtagcag
     6181 aattgttaat gacttattag agcaaattgg agatgtatcc tgtattcatc taatatcaac
     6241 ttcggggaaa ctagattttt atcgtaaact aggatttagt aagttaaaaa ctggtatggc
     6301 gatatatcaa agtgaaaaat tgaaaatcga atatactgaa tcatagtttg acattatttg
     6361 aatgaattaa gtgattacat ttcgatttaa agtgggggtc gaatgtaggg gatgtcgaaa
     6421 ataataggat atcttcatca ttcataacaa actaaaaagc agatttagaa gtatggttat
     6481 aaactttgga atctgctttt tacgtattgt gaaaatgttt acgattaccg ctcaggtttc
     6541 tcataccatg attttaaaaa tgtatacaag acttccgtaa aataatccaa atcttgaatg
     6601 cgaatttttt cattcgttcc atgggcttcg tcgagttcgc ctggtccata taaaatggtt
     6661 ggaatgccaa agtctgcggt ccaaccgcca tctgttactg ttgtgctcat tgtcgtttga
     6721 agcggtgcct ggtgtacgtc ttcatgtgct ttagctaaca tgtgaaatcc aggatgagat
     6781 gtcggtaaag tgaagcttgg gaagatttca cctttctctt caatcataga agcgccaccc
     6841 cattcgaatt gaagtggatt ttgactaagc cataaatcac tatcggcaat tttatttaaa
     6901 tacgtttcaa tttcttctat aatggtggcg taactttcgt caggcaaata atgcacggta
     6961 atccataagc gacattggtc agcgataaaa gcaggatgac gcccgccttc aattacagct
     7021 ggattaatcg tattggcgcc tggtggcatg ccgggataag atttcgtaac tgcccaatgc
     7081 cgttcgagtt cttgtaaggc ttgtatgatt tttatcattt tttcaatcgc actcgcacca
     7141 tgacgaccac cacctgcgtg aatgatatga ctgcgcgcac cgtcatggat cgtctcctca
     7201 ctttgaattg tgatccatcc ggtaatgacg ccgccttgtc ccatcgcaat gttattgctt
     7261 gtatctaaca caagtgctaa atcagctttt ggtgaatgtt cacaggcgac ttttgtacct
     7321 gcttcgccaa cttcttcgcc gacaacagag tgtacgataa tatcgccttc aggttgtaag
     7381 ccttcttggt gcaagcgttc taaattataa aaaagggcgg acatgccacc tttcatatca
     7441 gcaacgcctc taccaaatag aaaattatct tctgcagtca gttgaaaagg attgaagcgc
     7501 caaaattgtt catcttcaac ttctgcaaca tcgacatgtc cgtttaaaat tagacgtgct
     7561 gcttctggat tccgtccttt taaagtgccg acgacaatac agtcattgtc ataaaatgga
     7621 atcgtttgga cttcaaaacc tatgtcttca agccaagatg caatttgaag ttgtaacagg
     7681 acggtattgc gggcaggagg actcactgtc ggatgcgcaa ttaatgtttg aagtatatca
     7741 aattgtcgtt gttccataag gatgcccctc caatgctaat aagcgctttt tacgatgcaa
     7801 accactatta aaaccaccta attgcccatc ttttcgtaag acacgatgac acggcacgat
     7861 aatagacaac ggattttgac cgatagcaga tgccacagca cgtacacttt ttggacggcc
     7921 aatcatttgt gcgatgtcac tataatttac aaccgcccca aaaggaagtt gttgaagggc
     7981 ttgccacact tgttgttgga atggtgtacc aatgacgtgt gcgacaggtg tcttgaatgt
     8041 gtgacaatgc ccatgaaaat aagcttccaa ctctaaagca atttggttca caattgggtg
     8101 gtatgaaatt tgaatgagtc ttgcttgctt ttgaaaatgt ttcaatgcag tatgataatc
     8161 ttttgagtct gtaaatgata aacctaacaa ggcgtcatca ttcacaacag cagtcattaa
     8221 cccaagcggt gtatcaatat gttgaaagta aaatgacatc cggttcgacc tcctttaatt
     8281 tgattgaaat ggcacgaaac cattactact gatcgcaatg ttgtcatgtg gaaaagcgtc
     8341 ttgcattaat tttaacacat gcagataggt gtctggatga taccaagact gtaaatcgaa
     8401 atcttcgtat aaagactgaa tgccgagtga ttgtgtgcga cgaccgtttg acccatcacc
     8461 cataaagtaa tcgtcaatcg taacacggtc gacatgttta gctaaacgtt cgccaaactg
     8521 attcgtacaa ggtaggacag gtgcaacggc aatttgtgtt ggaatatgtg ctgcacgaag
     8581 tttgtccaca gttttgagac gagattgaat actcggtgct ttgggtgtga aatgacgaat
     8641 gatgtcttca cggtcgcttt ctacggtcat actcacgatg aaattaccag gataagattg
     8701 aaggatgtcg atatctcgtt gtataagcgg gctacgtgtt tgaatgaaca aaaaatcagg
     8761 cggacagtca tgcatttcag ataataaata gcgcgtcatt tcatattttt tctcaagtgg
     8821 ctgatacggg tcggtagaag aggacatgaa tactgtgaaa ggtcctttag ctttattttt
     8881 ctggagctct tttcgaaatt tcagctgttc atctgtttta gcagtgaccc aatcgcccca
     8941 agttttacct gaaaagagcg aaatcggtga gcgacgtacg taacagtaag tgcacgcaaa
     9001 ttgacagccc atgtatggat tcaaagtatg tgtataatct tttaaatagc cactcgcttt
     9061 cgttaaaaat tgttgtggct gacgtgattg gatgtccatc aaatcctcct aaaataaaaa
     9121 cagacaggtg acttgcgacg acctgtctgt actggattta tgcttgtaat gtttcaatcg
     9181 ctgtagcaat agatttaaat acgtgtggta aatcttcttt ttcaatacaa ctaaaggcga
     9241 tgcgaatatc agtttcgtta agcgcaacga taccgattga atgcttctca atcaaatgta
     9301 cacgtaattc ttcagcattc acacctttca ctttcaacgc catgaagtaa ccagagttaa
     9361 agtcatacgg ttgccataat gattggtatg cttcatcata aacaagttct tttgtcactt
     9421 cataacgtgc ttgtaaaatt tgaatgttat gttgcacttc atcattgaaa gatgcccctt
     9481 gtttcagcgc gtgttggacg gctgcttgag aaggtgtagc accacttgag ttgttgctac
     9541 gaatgagccc tttcatttta gcttctaaca cggttttagt cgtgtcattt gtagtaccaa
     9601 aagttaagaa accgacgcgg aagccccatg cgaaaaactc ttttgtcgca ccatctaaac
     9661 gaataggtaa cacacgttca ttgtttaatc gtgtcagtgc agtgaaaatc gattgtgtat
     9721 aaacatcttc ataaaataag ccataatatg catcatcaac aacagcaacg acattgacac
     9781 cgcgttttgc caaacggtca attgcttgaa caattgcttc aacttcatcc gttgtaggtg
     9841 tgtaaccagt tgggttgttt ggatagttta acagcatgat gactttatct tcttcaaatt
     9901 gatctaacgt tttcacgaga tgctcgattg tgaaatgacc ttgtgcatca aaaataggat
     9961 aagtttgcat tgttgcctgg tgacgaatac catacacgag gttatagttg ccccaattat
    10021 gttgcggtaa taatacagtg tcacctgggt ttacaaataa atcaccaatt aatgataaac
    10081 cgtgtgttaa agcgttcgtc acgataggta aactcatcgc ttcttgcgtt aagtcaggat
    10141 tctcttttaa cattttttgt tgccatagtt cacgtaattc agccaagcct tgtggtgggg
    10201 cataagcaaa aacttcatct gtcgttaaat gatcaaacat gccatataac gtttcagtgt
    10261 acattttacc ttcggctgtt gtagccatac cgattgtcgc gttatatttt gtcgctttgg
    10321 cttcagcaga ttgtgtcaaa ataccttttg gataatacat atttgttcca aggtcggaaa
    10381 gcatatctag gacgactggg ttttcttcac ttaactgttc gtttaattgt agcgctaaag
    10441 ggttcataag attcgacctc tttctatttt ttcatcatat acgtctatca tacagtgaat
    10501 aacaataaat ttaaagaata gactgataga aaattcaact taaaagcgca aaataagaac
    10561 acatgtttgg ggttttatgt taaaataaat gtagccacca ctccctacat ttttggcgct
    10621 ttataggaaa acggtttcta aaagtaggag gtgtttaatc atgtcgtgga cagaattttg
    10681 gatgttatta attaatggtg gcattctcat tatttttagg tgttgggtcg aatcgaagtg
    10741 gagaaggcga gatcaggaaa aacaacaaaa agatgattca acacatacat gaactaaggc
    10801 ccagcaaaca aaagccccaa acttgcggca acaagtttgg ggtgtttaat catgtgtgga
    10861 tacactatta ttttatcacc ttcacaattt ggaggcaaac gatttattta cgaaacatat
    10921 gtaatgttta ggtggtgagt ttaagaatgg gtttggagga attcaacgtt atcagttcat
    10981 gaagtgctgt tgacaaatgg ctcagctttt tctaatgttt gaatcagcaa ttaattaaaa
    11041 ggagaatcca atgaaacatt taacgaaagt ttttgtcatt attgcgttat taatttttgt
    11101 tattggcatc atcttacagt ttttagggga agaaacgtca gccatcaaac tgtttatcgc
    11161 gaccatttta tttatgattt gtgcctttat tagccgtcat aatgatcgga aaaagcaacg
    11221 ttaagcaatt aaaagcattg aatttgatga aatgtaatgt aaaaaagttt aaaattttaa
    11281 atataacaag ttgatagttg ttttctatca gatgattttg ttatgttaac gagtgttgaa
    11341 catttctatt cacgacaaat gcttttggga gaaatgttga agtgttgaca tatagaagta
    11401 ttcgcactca gtacataggt gtgtcgtcat ttataacacg agttcagtct atccttaatg
    11461 ataaagggga gttttcaaaa agtgcagtcg aaaatataca tatttcacat tttttgactg
    11521 accaatacta tttaacagga tgcgctatta agacgatagt gagttgctca aggttcaatg
    11581 agccatactt tatgatcagt aatcgcaatt atatgagtga agtcatttca aatgtatcat
    11641 ctaatcaata aacaggagga ttcgtggatg gaattgaaac aaatcaccaa acaatatggc
    11701 aacaatactg tcattgatcg cgttgatttt gcatttaatg atagtaaaat tgttggatta
    11761 attggtaaaa atggtgttgg taaaacaaca ttaatgaaaa ttatgaatgg caatattatt
    11821 aattaccaag gagacgttca agtagtcaat gacgataaaa tcggttattt aattgaacat
    11881 ccgaaacttt acgataataa atcaggtcta tacaatttaa aactttttgc gcaagtttta
    11941 ggtactggtt ttgataaagc gtatacgaat catattatta aagcgtttgg tatggagtcc
    12001 tatattaaga aaaaagtgaa aaaatattca atggggatga aacaaaaact ggctatcgct
    12061 gtttctctca tgaataaacc gaaattttta attttagatg agccaacaaa tggcatggat
    12121 ccagatggtt caatcgacgt cttaaaaacc attgaacaac ttgtacaaca attagacatg
    12181 aaaattctca tttcgagtca taaattagaa gatattgaac tcatttgtga ccgtgctgta
    12241 tttttgagag acggtcattt tgttcaagac gtgaatatgg ctgaaggtca atccacagct
    12301 caaacgatta ttcaagtgga ccctgatgac tttgaacaag cattatatta cttaactgat
    12361 cattttaaag tcgtacaatc acagaaagaa tcaggagaaa ttattttaaa tgtgcaaagc
    12421 gattatcgca atttccttaa aggattagca caaaaaggta ttttcccaca atatattgaa
    12481 acacgtaaag tatcattacg cgacacttat ttcaatatta atcaacgagg tggtcaatca
    12541 tgaatatatt gcaattgttc aaattcgaca tcgtgagtat tttaaaaagt ccgcttactt
    12601 atttagcgat tcttctcggt attgcaccat tgctcattac agtcattatt ttagtcacga
    12661 acgataatcc ggtaaatgcg aatacaatgt ttagtgtcgg aaaatggttc ttttcgctca
    12721 ttggtctact attcgttatc aaaacgatta cacgtgatac cgctcaagga acgatccaac
    12781 tctttttaaa tcaaacacag agtcgtattg gttattttat tgcgaaaaca ttatctatca
    12841 ttttcatcag tattttcact acagctgttg tcgttttagt cacatattta attcaatggt
    12901 caactgatgg taaagattta gataatgatc agtcgtggaa attactcgta ttttatttaa
    12961 ttttattctt tgtctatggg ctattactgt ttttgattaa ccttattgtt caaaaaccag
    13021 cattagtgta tacactcggt attttattgt tacttttatt accagtcgtg aaaccgttta
    13081 ttccgcttat tcctgaaatt ggcgataata ttcaagattc attaaagtat attccgttta
    13141 gttacttaag cgataagact ttaggaaatg gtgtgacgtt tacgaactgg cagtgggtca
    13201 ttaatgttgg atccatcgtc gtcttgtggt tggcaaactt aacgttaatc gcgaaaaaag
    13261 atatttaaaa cttacgtcga cttttatata gtagcttaat gattgctaca gtgagactcg
    13321 cattccaagt ggctgactag agcataggtg tagggaagtc atgcaactac tacgttaagc
    13381 ggcgaccact ctcaaaatta aaaaaatcat tgtgtttcca actttatgca tcaggagtct
    13441 tgtactccga cgagccatta aaaacatcac tctacttcaa aagtggggtg attttttatg
    13501 cttttaaaat gtaacatcat gtatattgcc acgccttact tttgagatta tgtctttttt
    13561 aattgctagg gtttgtactc aaatcattcg atgaacaatc ttgtaaaaat aaaaatcgat
    13621 gcgtaagcgt ttacatttat atctttttac tttagaatac ttgtatacaa gttaggagtg
    13681 atgagatgga aattcctaaa caatggttga cgtatttatc aaaaggggag gccatagctg
    13741 ctactttacg cttaagtatt atgagtgggg aacgtgctac tcataaatta ctgactgaaa
    13801 accaagtcgc aaatgagttt caagtgagcc gttcacctgt gcgagatgcg tttaaaattt
    13861 tagcgcaaga acgtttaatt cgtttggaac gcatgggagc tgaaattatt ccatttacag
    13921 ataagcagcg tcaagaattg actgatattc gcctgatgat tgaatcgttt gcttttacga
    13981 aagttattca acggtctgat tggatggaaa ttgtgcaatc aatgcaacaa gcattagcta
    14041 tgatgcaagt aaatatccaa tataaagatg ctgcgagttt tgccgaaaat gatttgaaat
    14101 tccatgagtt aatggtttta gcgtgtgatc atcattattt aacgcattta tggcaacaaa
    14161 ttatgccgac aatgctatgt ctgaactata tgagtatgaa aaagcgaatg gacgagaatt
    14221 ttgaggattt tgaacgagtc attcaaaacc atgaactgtt tgttacagcg attgcacaaa
    14281 aagatagaaa aatgatgtat gaagcattcg aagccaattt taatgattta aacaacgata
    14341 tcggcgcatt ttgggcacag taatattaaa agaaaggtgt atcactatgg agaaatatat
    14401 gattggagta gatattggaa cgaccagcac gaaagctgtg ttgtttaaca ctgacggggg
    14461 agttcaacag aaagcacaga tagaatatcc attgcacaca ccacgtgtgg atgtttcaga
    14521 acaagatcca gatattatcg tcaatgcagt gacagaaacc attgcagaag tggtacggaa
    14581 aggtgacgta caacatgaag ctctgcaatt tatttcgttc agtgcgcaaa tgcatagttt
    14641 attactcatt gatgaattcg aacatccaat gactaaaagt atgacgtggg cggataatcg
    14701 tgcacgtttt gctgctgaag atttactgaa tcatcatgac ggtcatggca tttatcaacg
    14761 tactggaaca ccgatacatg cgatgtcacc gttaagtaaa ttatggtggt tgaaacaaga
    14821 tgaaaatgaa ctttttgaaa cggcaacacg ctatgtcgat attaaatcat atgttctgta
    14881 ccaattgaca ggtgaatggg tgatggatgc ttcgattgcc tcagctacag gattgtatca
    14941 tttacaaaat aaaacgtggg atgaaaaagt gttggcgtta cttgatattc cgccttcgaa
    15001 attaccaaca ctcgtatcga cgacgcatca actccgtttg aaagatgact atatagctga
    15061 aaaacttgga ttgcgtcgcg atttgcctat cattgcgggt gcgagtgatg gtgtattgtc
    15121 gaacttaggt gtgaacagtt ttgaaccagg agatgtggct attacgattg gaacatcagg
    15181 cgcgattcgt acagttgtcg atcatcctgt cattgatgaa aaggggcgta tcttttgtta
    15241 tgtgctcgat gatgaacatt atgtcattgg tgggccggtc aataatgggg gtgtcgtatt
    15301 gcgttggctc cgtgatgaat tgttagcgag cgaaatcgag acggcaaaac gattagggat
    15361 tgaaacttat gatgtgatgt ctcgcattgc acaaaatgtt caaccaggcg cgcaaggttt
    15421 attgttccat ccttatttaa caggtgaacg tgcgccttta tggacatctg atgcacgcgg
    15481 ttcatttatc ggattgactt tatcgcatca gaaagaacat atgattcgtg cagtgatgga
    15541 aggcgtatta ttcaatttat atactgtctt tttagcatta atagaagtca ttggcacgtc
    15601 accacaatcg attaaagcaa caggtggctt ctcaaaaagt catttatggc gtcaaatgat
    15661 ggctgatatt tttaatacaa atgttgaaat accaaaaagt tatgaaagtt catgtctcgg
    15721 tgcctgtgtt ttaggattaa aagcactcag acaaattgat aactatgaca ttgttaaatc
    15781 ttgggtaggt gcgacacatc aacatcatcc agaagcagtg catgtcaatg tgtatcaaaa
    15841 attggcttct atctttattc aaattagtag agatttaagt ccgtcatatc aaacattggc
    15901 acaatttcaa cgtgatttag aaaataataa agaatagagg ggattgtatg tttcaggaaa
    15961 tttggccact gttgagtgtg gctattgcaa ttattgtgtt attaatctta attatgaaat
    16021 tgcagttaaa tacatttgtc gcactggtta ttacggcaat ggtgaccggt attttgctag
    16081 ggatgccatt tgataaaatt gtcgcaacga tcgagacagg tatgggcggt acattaggcc
    16141 atatcgcctt gatttttggt ctcggtgcga tgctagggaa gttgctcgca gatggtggtg
    16201 gcgcgacgca aattgcggat acgttaattg ctaaactcgg taaaaaatat gtgcagtggg
    16261 cgatggtgat tgcatcattt attatcggga ttgcattatt tttcgaagtc ggtcttgtgt
    16321 tattaatacc acttgtcttt acgattgcga aacgaatgaa cgtgtctcaa ttaaaaatcg
    16381 gtatgcctat ggtaaccgca ttatcagtaa cacatggttt cttaccgcca catccaggtc
    16441 cagtcgttat cgctaaagaa ttaggcgcaa atattggaga agttttatta tacggcttta
    16501 ttgttgcgat acctgtgaca attatagcgg ggcctgtttt tgcgaaaatt gcaccacgtt
    16561 taacaccgac agcgtttcaa cgtgaaggcg atatttcatc attaggtgca acgaagtcct
    16621 ttaaagacga agaattgcca agttttggat taagtacatt cacagcatta ttacctgtat
    16681 tactcatgtt atttgcgaca ctttggcaac tgatttctgg gcatgaagga aaagcgcaca
    16741 atacacttga aagtatgatt tactttatcg gtagtgcagg tacagccatg ctcatcgcgg
    16801 ttgtcttcgc ggttttcagt atgggtattc gtcgtggtat cccaacgaaa caggtgatga
    16861 atacattaac acaagccatt tatccgattg ggatgatgct gttgattatc ggtgcaggtg
    16921 gcgcattcaa acaagtactc attgatggag gcgttggtgg ggcgattgaa aaaatattta
    16981 ctgacgtgaa tatttcgcca attctattgg catggttagt cgcagccatt ttacgacttg
    17041 cgctcggttc agcaacagta gcggcaatct caacaacggg tatcgtgtta ccgttgttac
    17101 aaacagcaga tgtcaattta gcgctcgttg cattagcgat tggggcaggt agtatcttct
    17161 gctctcatgt aaacgacgca ggtttctgga tgttcaaaga gtatttcgga ttaacagtga
    17221 aagaaacatt tttaacatgg tcattaattg aaacgattat ttcagtgagt ggactcgtgt
    17281 ttgtactgtt tatcagtcta ttcgtataag ctttgtaaaa aattagaggt tggaacgtaa
    17341 aaatttttag atacaattca ttcaaaaatt tgcatgtccc aaccccgtct tattgattaa
    17401 acgagtcgag acataatcga ttcatacaca tcatgccaaa atgatgcgtc tgtcaaataa
    17461 cgctctcgaa tcttgagatg tacttctttt tgtttttcct caaagctcgg atctgtttta
    17521 tccggcaatg atgcttttcg taacgcctca acaaattttt ggacattgag tgcacgagga
    17581 ccccataccg ctttttgttc aaacttctca ttcataaaaa tataaattgg gatggaacgt
    17641 gacttaccat ttgttaaata ttgatcgatt aaatctgtgt tatcatcgcg gtgaaatacg
    17701 cgtacttcca aattggcttg ttctgcaata tgtttcaaaa tagggttatt catcattgca
    17761 tcgccacacc aatcctctgt aatgacaagg acatatttgt agccgctatc tttaattttt
    17821 tcaattctct catcatcagt cggcatatcg aaatctttat aaatgtttaa gagttctgtt
    17881 tgattttgtt ccatatcttg aatatactgt tcgaaaggtt tagcttctgc gtaataagtt
    17941 cttaaatgtg ccataaaata cccctccctt tttattcatt ataccagtgt atgattttga
    18001 agaaaattaa aaagattacg acaaattaag attatgacat ttacaataca aatattcaaa
    18061 aagtgtttaa ttttacagca caactcctta taatttgagg tgataaaaga ttgcaataaa
    18121 ggggggagct gcggtggata aaattacgtt tttgaatgaa ttagaatacc aattacatcg
    18181 attgcctaat catgtcgttg acgaagtgat gaatgagtat gaaaaccatt tttatcgtga
    18241 aggtttggat ggcaaatcgg atgaagccat cgtcaatgct ctcgatacac caaaacaaat
    18301 cgcgaagcaa cattatgcga aatacgcagt caaaaatgct gaaaagaaac cagatgtgac
    18361 gcatttagtc cgcgctgttt ttgcaacgat tggcatgagc atgattacat tgttttttat
    18421 tgtgattccg ctcttttttg tgggcttact tctactcata gggacatttc tcgctttagg
    18481 catgttgtta tcgccattgt tactgttgat tacagatgtt tggtcaggga tgttttcttt
    18541 ttccctcagc aattacttgt atagttttgc ttatttagga ctgggcatga tgtttatcgt
    18601 tatgattgtt aaactgatt
//
LOCUS       DANHPA010000048        18508 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.048, whole genome shotgun sequence.
ACCESSION   DANHPA010000048 DANHPA010000000
VERSION     DANHPA010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 18508)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18508)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18508
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.048"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(413..817)
                     /gene="arsC"
                     /locus_tag="PTC28_001317"
     CDS             complement(413..817)
                     /gene="arsC"
                     /locus_tag="PTC28_001317"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (thioredoxin)"
                     /protein_id="HDK5716607.1"
                     /translation="MHKKTIYFICTGNACRSQMAEGWGKHILGDDWDVYSAGIETHGV
                     NPQAIKAMEEVGIDISSHTSDLIDPQIIQQSDLVVTLCSDADQNCPTIPSHVNKEHWG
                     FDDPAGQAWSEFQRVRDEIGERIKAFHAHTES"
     gene            complement(833..2122)
                     /gene="arsB"
                     /locus_tag="PTC28_001318"
     CDS             complement(833..2122)
                     /gene="arsB"
                     /locus_tag="PTC28_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011274434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite efflux transporter membrane subunit
                     ArsB"
                     /protein_id="HDK5716608.1"
                     /translation="MTFLAIVIFLFTLVFVIWQPKNLDIGVTALIGAFLALVSGVVSF
                     SDVVEVTGIVWNATMTFIAIILISLILDEIGFFEWSAIHMAKAANGNGLKMFVFVMLL
                     GAVVAAFFANDGAALILTPIVLAMVRHLGFNQKAVFPFVIASGFIADTTSLPFIVSNL
                     VNIVSADYFDIGFIQYLSRMFIPNLFSLMASIFILWLYFKKSIPRTFDTQNLTLPKEA
                     IKDHKLFNVSWAVLALLLVGYLVSEFVKIPVSFIVSSIALIFILFARQSKVIRIKQVI
                     KGAPWHIVLFSIGMYLVVFGLKNAGITTILADILTHISSYGLFSSVMGMGFISAFLSS
                     MMNNMPTVLIDAIAIGQADVVGAIKEGMIYANVIGSDLGPKMTPMGSLATLLWLHVLT
                     QKGVKISWGTYFKIGIITTIPVLFITLLGLYLTFILF"
     gene            complement(2119..2439)
                     /locus_tag="PTC28_001319"
     CDS             complement(2119..2439)
                     /locus_tag="PTC28_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HDK5716609.1"
                     /translation="MSYQALSKILKILADPSRLEILDILSCGELCACDLLAHFDFSQP
                     TLSYHMKALVDNELVFTRKSGNKRLYRLNRSLLEAVNANINFIHTAHERCICHDIISG
                     ECGA"
     gene            complement(3367..5220)
                     /locus_tag="PTC28_001320"
     CDS             complement(3367..5220)
                     /locus_tag="PTC28_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HDK5716610.1"
                     /translation="MFMMIYTIVALIVIIILNWTIIRGRKRRSLSQQHRDVTPDTTQP
                     ERDAHPTTYTFRLDEDDQYSAATSTRQNQSEEDAFHTTSAENDDTSLHATANQNKTAP
                     RPVNEQVADATQNYVFKKGATRGKILTAMIFGMFISILNQTLLNTALPRINTDFNISA
                     STGQWLMTGFMLVNGILIPISAFLFNKYSYRRLFLTAMLIFTIGSLVCGFAWSFSIMM
                     VGRVLQAMGAGVLMPLGTNVFMTIFPPEKRGMAMGTMGIAMILAPAIGPTLSGYIIEN
                     YDWHTMFFGMFIVGIISLALAFVWFGIYQKTTNPKADIPGIIFSTIGFGALLYGFSEA
                     GNDGWTSTKIVIMFIIGISFTVAFVVREMTMKAPMLSFEVLKYSGFTLTAVINMILTM
                     SLFGGMILLPLYLQSLRGFSALDSGLLLLPGALIMGVMGPIAGKLLDTIGIKPITIIG
                     LAITTYGTWELTQLTMDTPYRSILMIYIIRSFGMSFVMMPIMTAGMNALPSRLISHGN
                     ALVNTMRQLAGSIGTAILVTVMTQQTESHLATFQQDLDRTDPTIQDSLQALAQQLGGQ
                     EQAMGAIIKFVNQLASVDGVNSAFWVATALSGLALILSFFLKGKSHYISNE"
     gene            complement(5237..5884)
                     /locus_tag="PTC28_001321"
     CDS             complement(5237..5884)
                     /locus_tag="PTC28_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HDK5716611.1"
                     /translation="MKKLIMINIVTIIVLIIGGIVGFYFYNQSVNYIKTDNAQVDGDQ
                     IKIASPVSGKMSSLDVREGDTLKKGDTVAKVQGARQGEAPQTMTITMPKAGTIAKLDG
                     QEDGIAQAGQPIAYAYDLDDLYITANIDETEVKDVQNGQDVDVTIDGQDAKVKGKVDQ
                     IGHATASSFSLMPSSNSDGNYTKVTQVVPVKIKLNSQPSNGVVPGMNAEVSIHKN"
     gene            6011..6574
                     /locus_tag="PTC28_001322"
     CDS             6011..6574
                     /locus_tag="PTC28_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDK5716612.1"
                     /translation="MGKTKSKARRRIVKAMIELLKTESFDEITIKQICAESGVHRSTF
                     YAQFEDKYQLFDVLTTYHMAKYEKLILYTSKVFESYPLEEAKARVIQTFRLLFKYMKR
                     HQTFFTTIIVTQPQLKAIHQYLKFTRDAYEKLLNQLPQLQQSKYFINYTIGGELALIY
                     SWLMQGCQESPDDMAQILYANIIKTGR"
     gene            6678..7847
                     /locus_tag="PTC28_001323"
     CDS             6678..7847
                     /locus_tag="PTC28_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF418 domain-containing protein"
                     /protein_id="HDK5716613.1"
                     /translation="MASTPKKQRIIELDALRGMSLFGILLMNILVFSFPYEHVRLDVA
                     LQGVNGFLFRVVSLLVIGSFYPIFSFLFGFSLMLIYHSTQQRGIAFKPVMIRRLIFLA
                     LLGLIHGFFFYSGDILFTYAVMGFGAMWCTKSSVKRLKNAAIILFAIKVVIWGLPFLI
                     MGWMTKAKLPFSGGSQAELNNVLQAQTSVHYIDFFLYNAQDNFSNIAATLTLDWLDIF
                     PYLLLGMAAMKGHFVTWVKEHPTRAIKWGSLFIIIGVLIKFLGAYAITNPGYMMFSFT
                     VGGPLLSVGIVLLFFHMMQYHTAQKFLDPFRYLGKMSLSVYLSQTLVCMFFFAGFGLG
                     FYNQLPLYQTYLFALALFLVQVVICYVYQRQFTQGPVEWVWRKVTYFGVKTMSSK"
     gene            complement(8081..8644)
                     /locus_tag="PTC28_001324"
     CDS             complement(8081..8644)
                     /locus_tag="PTC28_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDK5716614.1"
                     /translation="MQHFRLAVNDDIDFVYPTLKYAPALYKVINQNRDHLKTFLPWAE
                     TMTSVEKEAAFMQQTLSLVAEGKALFFLIYKQDQLIGTIDLHAWNEKTRKAEVGYWLA
                     KSENGQGITTAAVRKLCEIAFTDYHLNKLELRANVRNIGSNRVAEKVGFRFVGVKHED
                     DIEEGQYVSVNHYECLKRDFNHVGDDT"
     gene            8876..10327
                     /locus_tag="PTC28_001325"
     CDS             8876..10327
                     /locus_tag="PTC28_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HDK5716615.1"
                     /translation="MKKKNQKPDRGDLQQNLSEKFVWAIAYGSCIGWGSFILPGDWIQ
                     SSGPIAASIGIFIGALLMIVIAVSYGALVERFPVSGGGFAFSFLGFGRYVSFFSAWFL
                     TFGYICVVALNATAFSLLIKFLLPDVIEFGKLYTIAGWDVYITEILIASILLLVFMLI
                     AIKGASVSGSLQYYFCVAMVVVVVLLFIGSFFGSNYSLDHLKPYNGTHYGWFQAIIMI
                     VAVAPWAYVGFDNIPQTAEEFNFSPNKTFKLIVYSLLAASFTYILMILYTGWLSGGNS
                     DLWLTGSVTREAFGTIGLAVLSIAIIMGIFTGLNGFLLSSSRLLFSMGRSGIMPSLFS
                     QLHKRYKTPYVAIMFLVAITLIAPWLGRTALTWIVDMSSTGVSIAYLVTCLAAAKLFS
                     FNQNSQTYGPVYKVFAIIGSIFAFIFLLLLLLPFSPASLSMPSYIALGGWTILGLVFF
                     FIRLPKLRRMDKDELTQLILDTRKRDVEKMIEE"
     gene            complement(11061..11423)
                     /locus_tag="PTC28_001326"
     CDS             complement(11061..11423)
                     /locus_tag="PTC28_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016424340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HDK5716616.1"
                     /translation="MKVFIILGALNALMAVGTGAFGAHALDGKLSEHYMSVWEKATTY
                     QMYHGLGLVLIGIIGGALNLNVGWAGWLMFLGIVFFSGSLYILSLTQVSVLGAITPIG
                     GILFVISWLMLAIAAFKL"
     gene            complement(11451..11774)
                     /locus_tag="PTC28_001327"
     CDS             complement(11451..11774)
                     /locus_tag="PTC28_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5327 family protein"
                     /protein_id="HDK5716617.1"
                     /translation="MNKDKLIQLLEHELVQADAATTDAAFEKHIYAIHALTALYTGQE
                     TSAPSRSSSTVTPKRQASTQVTDEEIRMMGGKVSSSSATAQTTSDQRMVTDDEIGNGA
                     SIFDF"
     gene            complement(11767..12435)
                     /locus_tag="PTC28_001328"
     CDS             complement(11767..12435)
                     /locus_tag="PTC28_001328"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HDK5716618.1"
                     /translation="MDWSTIFHEIKEKHDFKAMHDFLEKEYTTQIVYPERENIYQAFD
                     LTPFENVKVVILGQDPYHGPNQAHGLAFSVQPGAKFPPSLRNMYQELADDIGCQRTSP
                     HLQDWAREGVLLLNTVLTVRQGQAHSHKDIGWETFTNEIIQAISDHKKGVVFVLWGRP
                     AQQKERLIDTSRHYVIKSPHPSPLSAHRGFFGSKPYSKTNAYLEAQGLAPIHWCEQKE
                     EAYE"
     gene            12625..13455
                     /gene="thiD"
                     /locus_tag="PTC28_001329"
     CDS             12625..13455
                     /gene="thiD"
                     /locus_tag="PTC28_001329"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001185456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HDK5716619.1"
                     /translation="MALKKVLTIAGSDTSAGAGMQADLKTFQELDTYGMVALAAIVTM
                     DKETWSHDVSPIPFDVFNKQLETVISVGPDAVKTGMLGSEEIIQRAGEAYTESGAKNF
                     VVDPVMVCKGENEVLNPGNTEAMIKYLLPKATVATPNLFEAGQLSGLGTLKSIEDMKK
                     AAKIIHEQGAQHVVIKGGKALDQDKSYDLYYDGNKFYQLTTDMFQQSYNHGAGCTFAA
                     ATTANLANGQTPKEAVINAKAFVASAIKNGWKMNDYVGPVDHGASNRVEQIEVEVTEI
                     "
     gene            complement(13600..13857)
                     /locus_tag="PTC28_001330"
     CDS             complement(13600..13857)
                     /locus_tag="PTC28_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716620.1"
                     /translation="MCFSTEDVQHYLALVNDTNPIHTDIVPGQLVVQYVCVEAGVEPI
                     AVRYKNPIAVDEQITWQRDNMQIQVSGIDEQLKIVIEVKAS"
     gene            complement(13857..14228)
                     /locus_tag="PTC28_001331"
     CDS             complement(13857..14228)
                     /locus_tag="PTC28_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716621.1"
                     /translation="MQHFLSVGDREVKAYSFDKSAVQRYQQFFNMPQTTTVPLLMTAR
                     VWPLFSLFRPFKETAIRLVATEIETHYPLKVGEHYQVTMAVLKVQQIKSFQRYQMALS
                     FDQGDTCHCRIIQTFVSRRVS"
     gene            complement(14197..15342)
                     /locus_tag="PTC28_001332"
     CDS             complement(14197..15342)
                     /locus_tag="PTC28_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HDK5716622.1"
                     /translation="MTKAVIVAAKRTPIGVYGGQLQKWEPEHLLKPLFEHFEATLSCS
                     LNDLDDVILGNIVGKGGNIARKSLLEAGIDVSVPGLTVDRQCGSGLEAIHLASRLVES
                     GAGDFYIAGGVESTSRAPWKMEKPTSLYPTTPPTFYERAPFAPVGQDPTMIEAADNVA
                     KQYDVSREDQDRFAVQSHHRASKAIATGAMSAEILPLIVKGQQIIQDESVKPHLQYER
                     IARLKPLHEGGTVTVGNCCLKHDGACLVVVMSEQKARELGMSEGLMFMDYAVEGVDPH
                     VLGIGPVPAVQRILERQQRTIDQIDAVELNEAFSAQVLASARALNIQEAQLNRYGGAI
                     AIGHPYSASGAILVTRLFYMKDAQSTIATMGIGGCMGNAALFERWRP"
     gene            complement(15339..16688)
                     /locus_tag="PTC28_001333"
     CDS             complement(15339..16688)
                     /locus_tag="PTC28_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HDK5716623.1"
                     /translation="MLKRLETYAVERPEHIAIRMDDVTLTYETLWRDVQKESEALPTN
                     ISHQNVMLTHTQTLDFIVAYLATLVRQGVPCVLGPQWSTEQRDALIKLHRMPYVWGDE
                     GLTSTSHEPAHKAPMIPQCLHIGFTSGTTGLPKGFMRDLPSWIASFEVNDTLLDASTQ
                     TYMALGPYAHSLTLYVLIYALWNGKTFIGQDRYDMAKSLVYAAELQQTCALFIVPTMV
                     YDGIHLGEQSQWIRHIFISGDKLPASRHTQLKKIFPESAIDEFFGTSEASFISVNRNQ
                     TAPLDSVGRLFPNVTVTLRERDDAGIGQLFVKSPMTFSGYLGEASVNEWIATGDYARI
                     ENDVLYLKGRVQDRLIIGGKNVYPAVIEQHLKQRPEIVDVVIVRLPHDKLGELAIALY
                     TGPEQLDIQAVRHWLSSRVSRYEIPSKFIYVATLPYTESGKVSRKMAQTCYERGDYQ"
     gene            complement(16899..17585)
                     /locus_tag="PTC28_001334"
     CDS             complement(16899..17585)
                     /locus_tag="PTC28_001334"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HDK5716624.1"
                     /translation="MPKLILCRHGQSVWNAENLFTGWADVDLSEQGHNEAITSGKKLK
                     EQEIQIDIAFTSLLKRAIKTTFHLLNESDQLYVPVVKSWRLNERHYGGLQGLNKDEAR
                     QQFGEEQVHIWRRSYDTPPPAQDEAQRERYLKDRKYELLDRRVMPESESLKDTLVRVI
                     PYWNDQISQELLADKTVLVAAHGNSLRALIKYLEGVSDEDIVGYEIKTGAPLIYELTD
                     DLKVIDKYYL"
     gene            complement(17802..>18508)
                     /locus_tag="PTC28_001335"
     CDS             complement(17802..>18508)
                     /locus_tag="PTC28_001335"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HDK5716625.1"
                     /translation="LSSVTTTFDVVFIAVKTHQIDTILPQLKTITHAQSKVILAQNGS
                     GLLPKLEGYDAYQAVVYISGEKQEDKVRHDKDYRIQLKQDAFTEQLKAVISTTALTLE
                     LEDNIEKAIWFKLIFNLGMNTLTALSRDTARLLKDDSMLELCKNLLKEGLQVANAEGI
                     TYEDSFVDDVIAAYRIFSDESATSMYYDTMNERVTEVEAIQGYIYRQGQKHQLHIPYI
                     ETTYTLLAHQNEVRQR"
BASE COUNT         5395 a         3944 c         3401 g         5768 t
ORIGIN      
        1 ttatcatttt ttatgatgat acatctttat taaaaattgg tgttgatact attgatgtaa
       61 ttagcgcttc tgaagaattg attaaaatgt taaatactaa gtttaatttt taattcatat
      121 atcatgaaaa cactatgcaa tttgtagtat cgtattagac tgtcgaaaaa gccctatgga
      181 gctgaccaaa tattattcta gcatgttgag gtgcctgttt taatacaacg gtagaacctt
      241 tccggaaccc tatgcatagc gcatcgtata cttttattca actatagaaa aagcaggttc
      301 gggaacatcc cccgcctgct tttcttgtca tctattgatt gcgccttcat atcacttcat
      361 agttatgtta tgccctgtct attggcctca aaggcatcac gttcacatga ttctaacttt
      421 ctgtatgtgc atgaaacgcc ttaattctct caccgatttc atctcgcaca cgttgaaatt
      481 ctgaccacgc ttgacctgct ggatcatcaa agccccaatg ttctttatta acgtgtgatg
      541 gtatcgtcgg acaattttgg tctgcatcac tacatagcgt gaccactaaa tctgattgtt
      601 ggatgatttg aggatcaatc aagtctgaag tatgagacga gatatcgata ccgacctctt
      661 ccattgcttt gattgcttgt ggattcacgc catgtgtttc aatcccagca gaataaacat
      721 cccaatcgtc acctaatatg tgtttgcccc atccctcagc catttgactg cgacatgcgt
      781 ttccagtaca tataaaataa atggttttct tatgcatctt caaccctctt ccttaaaata
      841 gaatgaatgt caggtataaa cctagaagtg taataaataa tacgggtatc gtcgtgatga
      901 taccgatttt aaagtatgtc ccccatgaaa tcttgacgcc tttttgagtt aatacatgta
      961 accataataa tgttgctaaa gaacccattg gcgtcatttt aggtcctaag tcagaaccaa
     1021 tgacattcgc ataaatcatg ccttctttaa ttgcacctac cacatcagct tggccaattg
     1081 caatagcgtc tattaaaaca gtcggcatat tgttcatcat agaagacaga aatgctgaaa
     1141 taaatcccat ccccatcacg ctactgaata aaccataact cgaaatatgc gtcaatatat
     1201 ccgctaaaat cgttgtaatc cctgcatttt tcaaaccaaa aaccaccaaa tacatcccaa
     1261 tagaaaaaag aacgatatgc catggtgcac ctttaatcac ctgtttgatt cgtataactt
     1321 tggattggcg tgcgaacaaa atgaatatca atgcaatact tgacacaatg aaagatacag
     1381 ggatttttac aaattcactc actaaataac ccacgagtag taatgctaaa acagcccacg
     1441 acacattaaa taatttgtgg tctttaatcg cctctttggg taatgttaaa ttttgagtgt
     1501 cgaatgttcg aggtattgat tttttgaaat atagccataa aatgaaaatg ctcgccatta
     1561 acgagaagag attaggaata aacatacgac tcaaatattg aataaagccg atatcaaagt
     1621 aatccgcgga aacaatattg actaaattac ttactatgaa cgggagcgat gtcgtatcag
     1681 caataaaccc acttgcaatc acaaacggga aaaccgcctt ttgattaaaa cctaaatggc
     1741 ggaccatcgc taaaacaatc ggtgtcaata taagggccgc accatcattc gcaaaaaatg
     1801 ctgccactac tgcacccaat aacatcacaa aaacaaacat tttcaagcca ttaccgtttg
     1861 ctgccttggc catatgtatt gcagaccatt caaaaaatcc aatttcatct aatatgagcg
     1921 aaatcaaaat aatagcgata aatgtcatcg tcgcattcca tacaattcca gtaacttcaa
     1981 ctacgtcaga aaagctaaca acacctgaaa ccaacgccaa aaatgcaccg attaatgcag
     2041 tcacaccgat atctaaattt ttaggttgcc aaatcacaaa aactaaagtg aacaggaaaa
     2101 taacaattgc taaaaatgtc atgcgccaca ttcacccgat atgatatcgt gacatataca
     2161 gcgttcgtga gcagtgtgaa tgaagttgat gtttgcatta accgcttcta acaatgagcg
     2221 attcagtcga tacaggcgtt tattaccgct ttttcttgta aaaaccaact cgttatcgac
     2281 taaagccttc atatgataac tgagcgtagg ttgcgaaaaa tcaaagtgtg ccaacaaatc
     2341 gcaagcacac aattccccac aagaaagaat atcgagtatt tctaaccgac tcggatcagc
     2401 taaaattttt aatattttgg aaagtgcttg atatgacatc tatatacctc ctaaacttca
     2461 aatagtttaa catctatata gacatttgtc tatgtaggtt tttttaagct taaaaaatac
     2521 gacttaacaa ttggtgctac tcattcaccc aacattttga atcatgtccc tttcgattat
     2581 gtttgtgcca tcagccagct attagctatg acatacaaaa agaggaccga caagatttga
     2641 gttcaatctc accagtcctc gtttcatata cccgacgtca atgcctctgt cgcccactcc
     2701 ctcgtacttc atatacaagt aggaatgaga cataaatttt caacaattta tctctgcata
     2761 aaatgatcat tcatttacat tttataatag tcaaaaatcg aaggtgaata attcataaaa
     2821 atagatgcta ttgttttgcc agatttcaaa aacttgccct cagtttcgct atattaggtg
     2881 taagattgcc cagaaggctg acactcctga ggggaggcgt gcatactgct agcagtcact
     2941 tctttacttt aaaagtagct accgtttaaa gcagtaactg tctgatttct caatgcgcat
     3001 gcttttgaga agtcgagtca gccttgcggg gtacagtaca acgaaatctt tgttacacat
     3061 gagatttcta tactgctccc aaaatctaca atgaatgggt gcgctgggaa tcaataaacg
     3121 gtgttccaaa agcaggattt tcgacagaat ccccgcgatt tcggcaaaat ttggaaagca
     3181 attttgctca tcgctcggtt ctgctcaaat cctaagcgct tttgtcacaa cctcccttca
     3241 tcccctagga aagagaagcc atgaaggcaa tcaaaaatac aaatcgtacg gagagggcaa
     3301 gtttaacaaa atactgcatc aatagcatca aaatttttac gcccatctct taaacgtatt
     3361 gattgactat tcgtttgaaa tgtaatgtga tttgcccttt aagaagaaac ttaaaatgag
     3421 tgctaaacca cttaaagccg tcgcgaccca gaaagcactg ttgaccccat caacagaagc
     3481 aagctgattg acgaatttaa ttatagcccc catcgcttgc tcttggccac cgagttgttg
     3541 ggccaaggct tgcaaactat cttgaatcgt tggatctgta cggtctaaat cttgttggaa
     3601 tgttgccaaa tgtgattcgg tttgttgcgt catcactgtc actaagattg ccgtaccaat
     3661 tgagccggct aattgtctca tcgtattgac taaggcatta ccatgagaga ttaaacgtga
     3721 cggcaatgcg ttcattcctg ctgtcataat cggcatcatt acaaaactca taccgaacga
     3781 acggataata taaatcatta aaatactacg ataaggtgta tccatcgtta attgtgtcag
     3841 ttcccacgtg ccatatgttg taatggctaa accgataatc gtaatcggct taatcccaat
     3901 tgtatcaagt aatttaccag ctataggtcc catcacaccc ataattaatg cacctggtaa
     3961 cagtaataac ccagagtcta gcgctgagaa gcctcttaaa ctttgtaaat aaagtggtag
     4021 taaaatcata ccgccgaaaa gactcattgt gagaatcata ttaatcactg cagttaatgt
     4081 aaatcctgaa tatttaagta cttcaaaact caacattggc gctttcattg tcatttcgcg
     4141 aacgacaaac gccaccgtaa agctgattcc gattataaac ataatgacaa tttttgttga
     4201 cgtccagcca tcgttacctg cttcactaaa gccgtataac aatgccccga aaccaattgt
     4261 actaaaaatg atacccggaa tatctgcttt tggattcgtc gttttttgat aaatgccgaa
     4321 ccaaacaaat gcgagcgcga gtgaaataat accgacaata aacataccga agaacatcgt
     4381 atgccagtca tagttttcaa taatataacc tgacagtgta ggtccaatgg ctggtgctaa
     4441 aatcatcgca atccccattg ttcccatggc cataccacgt ttttcaggtg ggaagattgt
     4501 cataaataca ttcgtcccta atggcatgag cacccctgca cccatcgctt gaagcacacg
     4561 cccgaccatc ataatcgaaa agctccaagc gaaaccacag acgagtgagc ctatcgtaaa
     4621 tatcaacatc gcagttaaga ataagcgacg atatgaatat ttgttaaata agaatgcact
     4681 aattggaatc aaaatcccgt tcactaacat aaagcctgtc atcaaccatt gtcctgttga
     4741 agcagaaata ttaaaatctg tgttgattcg aggtagtgct gtgtttaaca aggtttggtt
     4801 caaaatagaa atgaacatcc caaaaatcat cgcagttaaa atttttccac gtgtggcccc
     4861 ttttttaaaa acataatttt gtgtcgcatc tgctacttgt tcattgaccg gccgaggtgc
     4921 agttttattt tgattcgctg tcgcatgtag acttgtgtca tcattttcag cagatgtcgt
     4981 atgaaacgcg tcctcttcac tttgattttg acgtgtcgaa gttgctgctg aatactgatc
     5041 atcttcatct aaacgaaaag tatatgtcgt cggatgtgca tcacgttcag gttgcgtggt
     5101 gtctggtgtg acgtcacgat gttgttgaga aagtgatcgt ctctttcttc ctcgaatgat
     5161 tgtccagttc agtatgataa tcacaataag agcaactatg gtgtaaatca tcataaacat
     5221 gtgatgaccc cctctcttaa tttttgtgaa tacttacttc agcattcatg cctggaacaa
     5281 caccgttaga aggttggctg tttaatttga ttttaacagg caccacttgt gtcacctttg
     5341 tatagttacc gtcactattc gatgatggca ttaatgaaaa acttgaggca gttgcatgac
     5401 cgatttgatc aactttacct tttacttttg cgtcttgacc gtcaatcgtc acatccacat
     5461 cttgaccatt ttgaacgtct tttacttctg tttcgtcaat gtttgctgtg atatataagt
     5521 cgtcaaggtc ataagcataa gcaatcggtt gacctgcttg cgcgataccg tcttcttgac
     5581 catctaattt tgcgattgtc ccagctttag gcatcgtaat cgtcatcgtt tgtggcgctt
     5641 caccttgtct tgcaccttgt actttcgcga cagtatcccc ttttttcaat gtgtcgcctt
     5701 cacgaacatc taagctactc atttttcctg acactgggct ggcaatttta atttggtccc
     5761 cgtccacttg tgcgttatct gttttaatat agttcacgga ttgattgtag aaataaaatc
     5821 ctacaatccc cccgataatt aacacgataa tcgtaacaat atttatcatg attaatttct
     5881 tcatgtttac tactcctttt ctcaatcaat ttaacttctg tattataaga taattcactt
     5941 ttgaaaaata cagacaatct tgacaaatgt gtcggattga aatttataat ataataatga
     6001 tggtgataat atgggaaaaa caaaatcaaa agcaagacga cgcattgtga aggcaatgat
     6061 tgaattatta aagacggaat cctttgatga gattaccatt aaacagattt gtgcagagag
     6121 cggtgtacat cgttcaacgt tttacgctca atttgaagat aaatatcaat tgtttgatgt
     6181 tttgacgaca tatcatatgg caaagtatga aaagcttatt ttgtatacat caaaagtgtt
     6241 tgagtcttac ccgttagaag aggcaaaagc gcgtgtcatc caaacatttc gtctactgtt
     6301 taaatatatg aaacgccacc aaaccttttt cacgactatt atcgtgacac aaccgcaatt
     6361 aaaagctatt catcaatatt taaaatttac gcgtgacgct tatgaaaagt tattaaatca
     6421 actgcctcaa ttgcaacaat ccaaatattt tatcaactat acgattggcg gtgaacttgc
     6481 gcttatttac agttggctca tgcaaggttg tcaagaatct cctgacgata tggcgcaaat
     6541 tttgtatgct aacattatta aaacgggcag atagtttcac tgtcggacat gacacacatg
     6601 tgatacaatc caactgacct acatgataca aagctttgtc gaatttttaa taaagaagaa
     6661 aagtgaggtt atgcatcatg gcttccaccc ccaaaaagca acgtatcatt gagttagatg
     6721 cgttgcgtgg gatgagtttg tttggtattt tactcatgaa tattttagtg tttagttttc
     6781 cttatgagca tgtccgctta gacgttgcac tccaaggcgt caatggcttt ttgtttcgag
     6841 tggtgtcatt acttgttatt ggttcatttt atccgatttt ttcattctta ttcggattca
     6901 gtttgatgct catatatcac agcacacaac aacgcggtat cgcatttaag cccgtgatga
     6961 tacgacggct tatttttttg gcgttacttg ggttaatcca cgggtttttc ttttattcag
     7021 gagatattct atttacatat gcggtgatgg gctttggcgc gatgtggtgc acaaaatcct
     7081 ctgtcaaaag attaaaaaat gcagcgatca ttttgtttgc aatcaaagtc gtcatttggg
     7141 gtctgccctt tcttatcatg ggatggatga caaaagcgaa attaccgttc agtggcgggt
     7201 ctcaggcaga attgaacaac gtgttacaag ctcaaacgag tgtgcattat attgatttct
     7261 tcctttataa tgcacaagat aatttcagca acattgcagc aacactgacg cttgactggc
     7321 tcgatatttt cccttattta ttgttaggca tggcagcgat gaaagggcat ttcgtcacct
     7381 gggtcaagga acacccgaca cgtgcgataa agtggggcag cctttttatc attatcgggg
     7441 tgctcatcaa attcttaggt gcatatgcta tcacgaaccc tggctatatg atgttcagtt
     7501 ttacagtggg cggtccgtta ttatctgtcg gtatcgtgct tctctttttc catatgatgc
     7561 aatatcacac agcacaaaag ttcctcgacc cgttccgcta tcttggaaaa atgagtttgt
     7621 ccgtgtacct atctcaaacg cttgtctgta tgttcttttt tgcaggtttt ggtcttggat
     7681 tttataatca attaccgctt tatcaaactt atctatttgc gctcgccctc ttcctcgtac
     7741 aagttgtgat ttgttatgtc taccaacgtc aattcacaca aggtcccgtc gaatgggtgt
     7801 ggcgaaaagt tacatatttc ggcgtcaaaa cgatgtcatc aaaataagcg cacacgttaa
     7861 acaggcctgt tcaatcattc atagtcgcta cgctatcaat gtgaacaggc ccttttattg
     7921 gagaactttt tgaaaatgaa aaacacaaaa tgatatgttt actgtcatat cttttgctta
     7981 cccttactgt atcatgtttt gcatcatttt gggatacaaa tattagaaat ttattgtttt
     8041 tttatgaatt gtctcacaaa agatgtaata tttacatata ttaagtatca tctcccacat
     8101 gattaaaatc gcgtttcaaa cattcataat gattcacact cacatattgc ccttcctcaa
     8161 tgtcatcttc atgtttgacc ccaacgaaac gaaatcccac tttttctgca acacgattac
     8221 taccaatatt acgtacattc gcacgcaatt ctaatttatt gaggtgataa tccgtaaatg
     8281 caatttcgca taatttgcgt actgcagctg tcgttatccc ttgaccattt tcacttttcg
     8341 caagccagta accgacttct gccttacgtg ttttttcatt ccaagcatgc aaatcaattg
     8401 tcccaatgag ttgatcttgt ttataaatca agaaaaatag cgctttcccc tctgctacta
     8461 agcttaaagt ttgttgcata aatgccgctt ctttttccac agaggtcatc gtttctgccc
     8521 atggtaaaaa agttttgaga tgatctcgat tttgatttat aactttataa agcgctggtg
     8581 catacttaag tgttgggtaa acaaaatcaa tgtcgtcatt cactgcgagt ctaaaatgtt
     8641 gcaccccact caccccttac ctttagtttt cagattatta tacacaaata caacaattaa
     8701 aacaatctgt cttcaaactg aattttacaa gcacttgcgt caatcgcaat ctataaaacg
     8761 cattttttta atgcaatttt tcaattttta ggttatcatt tattttccaa ctgtcgaaat
     8821 tcgttgttat aaaaaaataa aacaggggta taagaatatt caggggtgaa aaataatgaa
     8881 aaaaaagaat caaaagcctg atcgtggtga cctccaacaa aacctttcag aaaaatttgt
     8941 gtgggccatt gcttatggtt catgtatcgg ttggggttcg ttcatcttac caggtgactg
     9001 gattcaatca tccgggccta ttgccgcatc aatcggtatt tttatcggtg ccttattaat
     9061 gatcgttatc gcggtaagtt acggtgcatt agtcgaacgc tttccagtgt caggtggtgg
     9121 ctttgcattt agttttttag ggtttggacg ttatgttagc tttttctcag catggttttt
     9181 aacgtttgga tacatatgtg tcgtcgcgtt aaatgcgaca gcgttcagtt tattaatcaa
     9241 atttttactg ccagatgtaa ttgaatttgg caaactttat acgattgcag gttgggatgt
     9301 ctacattact gaaattttaa ttgcatctat ccttttactc gtttttatgt tgattgcgat
     9361 taaaggggca agcgtttcag gttcattgca atattatttc tgtgttgcaa tggtcgttgt
     9421 cgtcgtatta ctctttatcg gatcgttctt tggttctaac tattcattag atcatttaaa
     9481 accttataat ggtacacatt atggatggtt ccaagcgatt attatgattg tcgcagtcgc
     9541 accgtgggcc tacgtcggtt tcgataatat cccacaaacc gcagaggaat ttaatttctc
     9601 accgaataaa acatttaaat taatcgttta tagtttactt gcagcgagtt ttacatatat
     9661 cttaatgatt ttatatacag gctggctatc aggtggtaat agcgacttat ggttgacggg
     9721 ttcggtaacg cgtgaagcat tcggtacgat tggtctagcg gtattgagca tcgcgattat
     9781 tatggggatt ttcaccggct taaacggttt cttgttaagt tcaagccgct tgttattctc
     9841 aatggggcgc tcaggcatta tgccatcgtt atttagtcaa ttacacaaaa gatataaaac
     9901 accatacgtt gcgattatgt tcttagttgc gattacattg attgcgccat ggttaggtcg
     9961 taccgcgtta acatggattg tcgatatgtc atctacaggg gtatctatcg cttaccttgt
    10021 aacatgcctt gcagcagcga aattgtttag ctttaatcaa aacagtcaaa cttacggacc
    10081 ggtttataaa gtgtttgcga ttattggctc aatttttgcc tttatctttt tactgttact
    10141 attgttgcca ttttcaccgg cgtcgttatc tatgccatcc tatattgcgt taggtggttg
    10201 gacgattctc ggattggtgt tcttctttat tcgtttacct aaattacgtc gtatggataa
    10261 agatgagttg acacaattga ttttggatac gagaaaacgt gatgttgaaa aaatgataga
    10321 ggaataatta attgtgaaat gttaaaagca ttggtatgaa aattttggta gacttacaca
    10381 ttttatttta cattatgtaa gaacactttt gattgccgcc atggattctc tttccgaggg
    10441 gctgaaggga ggttgtgaca gaagcgctta ggatttgagc agaaccgagc gatgagcaaa
    10501 attgctttcc aaattttgcc gaaatcgcgg gagttctgtc gaaaatcctg cttttggaac
    10561 accgtttatt gattcccagc gcacccattc attgtggatt ttgggagcag tacagaaatc
    10621 tcatgtgtaa caaagatttc gttgtactgc ccccgcaagg ctgactagac ttctcaaaag
    10681 catgcgcatt gagaagtcta gtcagctact gcgttaaacg gtagccactt ttaaagtaaa
    10741 gaagtaactg ctagcagtat gcacacctcc cctcaggagt ctcatccatt ttggcaatca
    10801 tgtgtgacca acaaagaaat taatccaacg gcttacattt tcataaaatc aataacatta
    10861 aatattttgt aacacatcca atgcaactca ctcatgattt caaaatcatt tattttcata
    10921 taaaacattg gaagaggctg ggaattaagt tttcctagcc tcctttttga tttcatcagt
    10981 ataaacaatg tgttaataaa gttcaattca acaaaaaaga cagacgtttg cctgcctttt
    11041 ccaactggat tcgaatgaac ttataattta aatgctgcga tggcaagcat gagccagcta
    11101 atgacaaaca aaatgccacc aattggcgta attgcaccaa gcacgctcac ttgtgttaaa
    11161 gataagatat atagtgaacc actaaagaac acgataccta aaaacatgag ccaacctgcc
    11221 cagccgacgt taaggttaag tgcaccacca ataataccaa taagcacaag acctaaccca
    11281 tgatacattt gatatgttgt cgctttttcc cataccgaca tataatgctc tgataacttt
    11341 ccgtccaatg catgtgcacc gaaagcccct gtacccactg ccattaaagc gttcagtgca
    11401 cctaaaataa taaatacctt cacaatattt cctcctcatc aaaatgatca ttaaaaatca
    11461 aaaattgaag caccatttcc tatttcatca tccgtgacca tacgttgatc agatgtcgtt
    11521 tgtgcggttg cgctagaaga tgatacttta ccgcccatca tccgaatctc ttcatctgtc
    11581 acttgtgtcg acgcttgtct tttcggtgtg acggttgaag atgaacgtga tggtgcgctc
    11641 gtctcttgcc ccgtatacag cgccgttaaa gcatgaatgg catagatatg tttttcaaac
    11701 gcagcatcag tcgtcgcggc atctgcttga accaattcat gttccaacag ttgaatcagt
    11761 ttgtctttat tcatacgctt cctccttttg ttcacaccaa tggattggcg ctaaaccttg
    11821 tgcttcaaga taggcattcg ttttggaata cggtttggaa ccaaaaaaac ctctatgtgc
    11881 cgataatgga ctcgggtgtg gtgatttaat gacatagtgc cgtgatgtat caatcaatct
    11941 ttctttttgt tgtgccggtc tgccccacaa tacaaagacg acaccttttt tatgatcaga
    12001 tatcgcttgg ataatttcat tcgtaaatgt ttcccagcca atatctttat gtgaatgtgc
    12061 ttggccttga cgcactgtaa gcaccgtatt caatagcagc acaccttccc tcgcccaatc
    12121 ttgtaaatgt ggcgacgtcc gttgacagcc aatatcgtca gcgagttcct gatacatatt
    12181 gcgcaatgaa ggtggaaatt tcgcacctgg ttgtactgaa aaagctaaac cgtgtgcttg
    12241 attcggacca tgatagggat cttgtcctaa tatcaccact ttgacatttt cgaatggcgt
    12301 gaggtcaaaa gcttgataaa tattttcacg ctcggggtaa acaatttgcg tcgtatattc
    12361 tttttctaaa aagtcatgca tcgctttaaa atcatgcttt tctttaattt catgaaatat
    12421 tgttgaccaa tccatcttct tcacctcagc cacattttaa cataatttcg cctcgctcac
    12481 cgctatgatt caataaacat ttttatagca gctgttcaat gtgcatgcta aaatggggaa
    12541 cataagcata ttgtagcgta cagcagttac catactcatt atggtatgat gtaatagatg
    12601 tacaattgaa ggagtgaatg aacgatggct ttgaaaaaag tattaacgat tgcaggatca
    12661 gacacaagtg caggtgcggg gatgcaagcc gacttaaaaa ctttccaaga gttagacacg
    12721 tacggtatgg ttgcacttgc agcgattgtg acaatggata aagaaacttg gtcacatgat
    12781 gtgagcccta tcccatttga tgtgttcaac aagcaacttg aaacagtcat tagcgtagga
    12841 cctgatgcag tcaaaacagg tatgctcggt agcgaagaaa tcatccaacg tgctggagaa
    12901 gcatacacag aatcaggcgc aaaaaatttc gtagtagacc ctgttatggt atgtaaaggt
    12961 gaaaatgaag tccttaaccc gggaaatact gaagcgatga ttaaatattt attaccgaaa
    13021 gcaactgttg cgacaccgaa cctttttgaa gcaggtcaat tatctggttt aggcacgttg
    13081 aaatctattg aagatatgaa aaaagcagca aaaatcatcc acgagcaagg ggcacaacac
    13141 gtggtgatta aaggtggtaa agcgttagat caagataaat catacgactt atactatgat
    13201 ggcaacaagt tctaccagtt aacaacggac atgttccaac aaagttacaa ccacggggca
    13261 ggctgtacat ttgcggcagc gacaacagcc aacttagcga atggacaaac accaaaagaa
    13321 gccgtgatta atgcgaaagc gttcgtagct tctgccatta aaaacggttg gaaaatgaac
    13381 gattatgttg gccctgtcga tcacggtgca tcaaatcgtg ttgaacaaat tgaagttgaa
    13441 gtgactgaaa tttaatttcc ttctcactca tattcaaact ccgtatttaa ataaacatgg
    13501 ctaaaacctt gatgtattat actgttgagc accgttatct cgttcacatt atgatacatc
    13561 aaggttattt tttcgagatt gggcaattcc cttgctctcc taggacgctt ttacttctat
    13621 cacgattttc agttgttcat ctattcccga cacttgaatt tgcatgttgt cacgctgcca
    13681 agtgatctgt tcatcaaccg caatagggtt tttataacgt accgctatcg gttcaactcc
    13741 agcctcgaca catacatatt ggacgacgag ttggcctggg acaatatccg tatgtatcgg
    13801 attcgtgtca ttcaccagtg ctaaatagtg ctgcacgtct tctgttgaaa aacacatcat
    13861 gacaccctcc gactgacaaa agtttgtatg attcgacaat ggcatgtatc accttgatcg
    13921 aatgataatg ccatttgata acgttgaaat gacttgattt gttggacttt taatacggcc
    13981 attgtcactt gataatgctc gcctactttt aaaggataat gtgtttcaat ttctgtagct
    14041 acgagtcgaa ttgctgtttc tttaaatggt cgaaatagcg aaaaaagtgg ccatacgcgt
    14101 gcagtcatta ataaagggac ggtggtcgtc tgtggcatat taaaaaattg ttgataacgc
    14161 tggactgcac ttttgtcaaa actgtaagct ttaacttcac ggtcgccaac gctcaaaaag
    14221 tgctgcattg cccatgcacc ctccaatgcc cattgtcgca atggtacttt gtgcatcttt
    14281 catgtaaaac agacgggtca ctaaaatcgc accactcgca ctatacggat gaccgatcgc
    14341 aatcgcacca ccgtaacgat tcaattgcgc ctcttgaatg ttcaacgcac gcgcagaagc
    14401 taacacttgc gcgctaaaag cttcattcaa ttctacggca tcaatttggt ctatcgtccg
    14461 ttgttgtcgt tctaaaatgc gctgcactgc gggtacagga ccgatgccta atacatgtgg
    14521 atccacccct tcaaccgcat aatccataaa catcagacct tccgacatac cgagttcgcg
    14581 tgctttttgt tcagacatga cgacaactag acaggcgccg tcgtgtttga gacaacaatt
    14641 accgactgtc actgtcccac cttcatgtaa tggctttaac cgtgcaatcc gctcatactg
    14701 aagatgcggc ttaacacttt catcttgtat tatttgctga cctttcacta ttaatggcaa
    14761 tatttcagct gacatcgcac ctgtcgcaat cgctttactt gcacgatgat ggctttgaac
    14821 cgcaaaacga tcttggtctt cacgtgacac atcatactgt tttgccacgt tgtctgccgc
    14881 ttcaatcata gtcggatctt gacctactgg cgcaaatggc gcacgctcat aaaatgtcgg
    14941 aggtgtcgtt ggatacagtg atgtcggctt ttccattttc caaggtgcac gactcgtact
    15001 ttcgacaccc cctgcaatat aaaagtctcc tgcaccgctt tcaacgagtc gactcgccaa
    15061 atgaattgct tcaaggcccg aaccgcattg acgatcaacc gtgagacctg gaacagacac
    15121 atctatccct gcctcgagca aactttttcg cgcaatattg ccccctttac cgacaatatt
    15181 accgagaatg acgtcatcta aatcattgag tgaacaagat aatgtcgctt caaaatgttc
    15241 gaataacggt ttcagtagat gctccggctc ccatttttga agttgaccgc catacacgcc
    15301 aattggtgtc cgttttgctg caacaatgac tgctttcgtc attgataatc acccctttca
    15361 tagcaagttt gtgccatttt tctcgaaact ttcccactct cagtatatgg taatgttgcg
    15421 acgtaaataa attttgacgg tatttcatat ctcgatacac gtgatgacaa ccagtgccgt
    15481 accgcttgaa tgtccaactg ttccggaccc gtataaaggg caatcgctaa ctcacctagc
    15541 ttatcatgtg gaagtcgtac aatgaccaca tctacaattt cgggcctttg cttgaggtgt
    15601 tgttcaatca cagcaggata cacattcttc ccaccaataa tcaagcggtc ttgtacacgc
    15661 ccttttaaat acagcacatc attctcgata cgggcgtaat cacctgtcgc tatccattca
    15721 ttaacggagg cctcaccgag ataacctgaa aatgtcatcg ggcttttcac aaacaattgt
    15781 cctattccgg catcatctcg ttcacgtaat gtcactgtca catttggaaa tagacgcccc
    15841 acagaatcga gtggtgcagt ttgattacga ttgacactaa taaagctcgc ttccgacgtg
    15901 ccgaaaaact catcaatcgc gctttcagga aatatctttt tgagttgtgt gtgacgactg
    15961 gcgggcaatt tgtctccaga aataaaaatg tgacgtatcc actgtgactg ttctcctaaa
    16021 tggattccat cgtacaccat tgtaggtacg ataaacaatg cacacgtttg ttgaagttct
    16081 gcagcatata ccaaactttt tgccatatca tagcgatctt gcccgataaa cgttttgcca
    16141 ttccataacg cataaatcag cacatacaac gttaacgaat gagcatacgg accgagtgcc
    16201 atatacgtct gtgtagaggc atcgagcaac gtatcattca cttcaaatga agcaatccat
    16261 gacggtaaat ccctcataaa ccctttcggt aaacctgtcg tacctgacgt aaacccaata
    16321 tgtaagcatt gcggaatcat tggcgcttta tgtgcgggtt cgtgtgaagt agatgtcaat
    16381 ccttcatctc cccatacata aggcatacgg tgtaacttaa tgagcgcatc ccgttgttcc
    16441 gttgaccatt gcggtccgag cacacacggc acaccttgac gtacgagggt cgctaaataa
    16501 gctacgataa agtccaacgt ttgggtatgc gtcaacatta cattttgatg cgatatattc
    16561 gtgggcaatg cttcactttc cttttgcaca tctcgccaca acgtttcata ggtgagcgtc
    16621 acatcgtcca tcctaatcgc aatatgttcc ggtctttcta cggcatatgt ttcaagtcgc
    16681 tttaacaatt ccaaacttca tcacactact tttacaattt ttctttattt taacatagcg
    16741 tgcactttcc acatatgtgg atttcatttt gtccctccat ctttcatatg tggtcatcat
    16801 gcaaaattta atgtgatgcc aactcatcca tattgatgca tttccatgtg aaaaggccgg
    16861 gtcatcgtga aatgcccagc cttaaaataa tacagttgtt ataaataata tttgtcaata
    16921 acttttaaat catctgtcaa ttcgtaaatc agtggcgcac ctgttttaat ttcatagccg
    16981 acgatatctt catctgatac gccttctaaa tatttaatca aagcacgtaa tgagtttcca
    17041 tgggccgcta caagtactgt tttatcagct aataattctt gagaaatttg gtcgttccaa
    17101 tatgggatga cacgcaccaa agtatctttc aaactttcag attcaggcat cacgcgtcta
    17161 tctaataatt cgtatttgcg atcttttaaa tagcgctcgc gttgtgcttc atcttgtgct
    17221 ggcggaggtg tatcgtaaga acgtctccaa atatggactt gttcttcacc aaattgctga
    17281 cgtgcttcat ctttatttaa tccttgtaaa ccaccgtaat gacgttcatt taaacgccac
    17341 gatttaacaa cgggtacgta gagttgatca gactcattta ataaatgaaa cgtggtctta
    17401 atcgcacgct ttaataacga ggtaaatgca atatcaatct gaatttcttg ttctttcaat
    17461 ttttttcctg atgtgatggc ttcgttgtga ccttgttcgg ataaatcgac gtctgcccat
    17521 cctgtaaata agttttcagc attccagacg ctttgtccgt gtctacataa aataagtttt
    17581 ggcatgtttt accttctttc tatatcgtga acgccagtgt cgcaacattt gttgatcaaa
    17641 aaagacgttc acgtactcat attgtaccaa caaatgcgct tactttattt tataaattga
    17701 ttataacaag ttttttatgc tttttcatga ttccaacatg ataaaatttg aatatattaa
    17761 gtcatttgct ccctgctact actacatttt cctgtgtcac tctatcgctg tctgacttca
    17821 ttttgatgcg ctagcaaagt ataggtcgtt tcaatgtacg gaatatgaag ttgatgcttt
    17881 tgaccttgtc tataaatata accttgaatt gcttcaactt ctgtcacacg ctcattcatc
    17941 gtatcataat acatgctcgt cgcactttca tcagagaaaa tacgatacgc cgcaatgaca
    18001 tcatctacaa atgaatcttc gtatgtaatc ccttctgcgt tagcgacttg caaaccttct
    18061 ttaagcaagt ttttacataa ttccagcata ctatcgtctt ttaacagacg cgctgtgtct
    18121 cgactcaatg cagttaaagt gttcatgccg aggttgaaaa tcaatttaaa ccaaatcgcc
    18181 ttctcaatat tgtcttcaag ttctaacgtg agcgctgtcg ttgaaatgac cgctttcaat
    18241 tgttcagtaa acgcatcttg cttcaactga atgcgataat ctttgtcatg tctcacttta
    18301 tcctcttgct tttcaccgct aatatatacg accgcttgat acgcatcata gccctctaat
    18361 ttgggaagta agccgctacc attttgtgct aaaatcactt tcgattgcgc gtgcgtgatt
    18421 gtcttcagtt gtggtaaaat cgtatcaatt tgatgggtct tcaccgcaat aaacacgaca
    18481 tcgaacgtcg tcgttacaga tgacaatg
//
LOCUS       DANHPA010000049        17931 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.049, whole genome shotgun sequence.
ACCESSION   DANHPA010000049 DANHPA010000000
VERSION     DANHPA010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 17931)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17931)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17931
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.049"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            21..653
                     /locus_tag="PTC28_001336"
     CDS             21..653
                     /locus_tag="PTC28_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkyA family protein"
                     /protein_id="HDK5716626.1"
                     /translation="MKFHKTIGVAVATTFLLAACSKDGEHIEKYNDGLENMQKAEAPI
                     QEVNKEMNKLEKEKEKLSKEISGKNIAEVQDKVDQVLDNAKKREKQLKKEVEAMNHSK
                     KAFEKAKAESNKIEDEDDKKEFDELNKAIEEKNKKHDAFVKGYQDVINKEKDLFSYFK
                     EDSGSQEEVDKRSKALSDVQKNMQKKVEDYTKAIRKVQTEKQDVDEIANK"
     gene            817..1929
                     /gene="pdhA"
                     /locus_tag="PTC28_001337"
     CDS             817..1929
                     /gene="pdhA"
                     /locus_tag="PTC28_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HDK5716627.1"
                     /translation="MVTKLNNQFDAEKVLKDTEAKFEMVQILDADGNVTNEDLLPDLS
                     DEQLVELMRRMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQFALEQEDFILP
                     GYRDVPQLIWHGLPLTKAFLFSRGHFVGNQMPEGVNALSPQIIIGAQYIQTAGVALGL
                     KKRGKKAVAITYTGDGGSSQGDFYEGINFASAYKVPAIFVIQNNNYAISTPRDKQTAA
                     QTLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAINGEGPTLIETMTYRYGPHTMA
                     GDDPTKYRTSDEDSEWEKKDPLVRFRKFLENKGLWSEEKENEVIEQAKNEIKAAIKEA
                     DSTEKQTVTSLMEIMYEEMPANLKEQYEIYKEKESK"
     gene            1933..2910
                     /locus_tag="PTC28_001338"
     CDS             1933..2910
                     /locus_tag="PTC28_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017637695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HDK5716628.1"
                     /translation="MAQMTMVQAINNALATELKNDENTLLFGEDVGVNGGVFRVTEGL
                     QKEFGEDRVFDTPLAESGIGGLALGLSTQGYRPIMEVQFLGFVFEVFDSVAGQIARHR
                     FRSGNSKVAPVTVRAPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLIE
                     SIRSNDPVVYLEHMKLYRSFREEVPEEEYTIEIGKANVKREGTDLTIITYGAMVQESM
                     KAAEELEKDGHSVEVIDLRTVQPLDVDTLVKSVEKTGRVIVVQEAQKQAGVGANVVAE
                     LSERAILSLEAPIGRVAAPDTIYPFTQAENVWLPNKTDIVEQAKKTLEF"
     gene            3066..4367
                     /locus_tag="PTC28_001339"
     CDS             3066..4367
                     /locus_tag="PTC28_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HDK5716629.1"
                     /translation="MAFEFRLPDIGEGIHEGEIVKWFVKAGDTIEEDDVLCEVQNDKS
                     VVEIPSPVSGTVLEVLVEEGTVAVVGDIIVKIDAPDAEEMEFKGGHSNDAPAKAEEAK
                     EEAPQEEAAPAAQEAVEVDENRQVKAMPSVRKYARDNNVNIKAVNGTGKNGRITKEDV
                     DAYLNGGEQAATAQDTASAESSEASTAPAASAPAVSTEGEFPETTEKISAMRKAIAKA
                     MVNSKHTAPHVTLMDEIDVQELWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYP
                     ALNTSFNEEAGEVVQKHYWNIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKA
                     RDGKLTSDEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKPIVKDGEIVA
                     APVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLMEG"
     gene            4371..5777
                     /gene="lpdA"
                     /locus_tag="PTC28_001340"
     CDS             4371..5777
                     /gene="lpdA"
                     /locus_tag="PTC28_001340"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009383646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HDK5716630.1"
                     /translation="MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLG
                     GVCLNVGCIPSKALLNVSHRFEQAQHGADLGITAENVSLDFDKVQSFKGSVVSKLTGG
                     VESLLKGNKVEIVRGEAYFVDEHSLRVMDDKSAQTYNFKNAIVATGSRPIQIPNFEFG
                     GRILDSTGALNLQEVPKKLVVVGGGYIGSELGTAYANFGTEVTILEGAKEILGGFEKQ
                     MVAPVKKEMKAKGMIIETEALAKSAEETDNGVKVTYEVKGEEKTIEADYVLVTVGRRP
                     NTDELGLEEVGVKLTDRGLVEVDKQSRTSVDSIYAIGDIVPGLPLAHKASYEAKVAAE
                     AIAGQNSEVDYIGMPAVCFTEPELAQVGYTEAQAKEEGLDIKASKFPYQANGRALSLN
                     DTNGFVKLVTLKEDDTLIGAQVVGTNASDVIAELGLAIEAGMNAEDIALTVHAHPTLG
                     EMSMEAAEKVLGLPIHTM"
     gene            6587..6859
                     /locus_tag="PTC28_001341"
     CDS             6587..6859
                     /locus_tag="PTC28_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0223 family protein"
                     /protein_id="HDK5716631.1"
                     /translation="MEYTYPIDVDWSQEEMVAVVSFFNAIESYYESQIERDTLMTRYR
                     EFKQVVPGKADEKNLLNDFKKQSGYDSYQVIQEAKQHPDQKTLKNS"
     gene            6962..7501
                     /locus_tag="PTC28_001342"
     CDS             6962..7501
                     /locus_tag="PTC28_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDK5716632.1"
                     /translation="MEIGQKIKNLRRLKNLTQEELGERTDLSKGYISQIESNKTSPNM
                     ETFLNILEVLGTSPRDFFDDKQVAKVHYPKSEQLSYCEDEKGYYLQWPVKRSNEFDME
                     PLLLTLEPHASYKDFQPSTSDTFVYCLEGAVTLTLGEQQYTAEKGDALYFKALATHRL
                     SNTSQVSAKLMIVATSSYL"
     gene            7516..8616
                     /locus_tag="PTC28_001343"
     CDS             7516..8616
                     /locus_tag="PTC28_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5716633.1"
                     /translation="MSELLKFKNVTKKYDTTTILNDIDLEIESGHFYTILGPSGCGKT
                     TMLKLIAGFETPDAGEVIYLGKNINQLPANQRQVNTVFQDYALFPHLNVYDNVAFGLK
                     LKKMKKDQIEKKVIEALKLVKLEDYMYSEIHALSGGQKQRIAMARAIVNEPEILLLDE
                     SLSALDLKLRTEMQYELRELQSRLGITFVFVTHDQEEALALSDFIFVMRAGKIEQFGT
                     PLDIYDEPVNRFVADFIGESNIVEGTMIKDYVVNIYGQDFDCVDKDIPPQTLVDVVIR
                     PEDITLVPEEQGLFKATVTSSLFRGVHYEMICEDRKGYEWMIQSTKNAEIGTRVGLDF
                     EPEAIHIMVPGETEEEFDKRIEGYGDLNHETY"
     gene            8603..9409
                     /locus_tag="PTC28_001344"
     CDS             8603..9409
                     /locus_tag="PTC28_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5716634.1"
                     /translation="MKHINRWLAIPYLLWMVFFIVIPVILLCYFSFVDDHGHFTLMNY
                     EQFFSVRYMRMLFESIVYATLITLICLLVSYPAAYFIHQSRHAASWLLVMIIPTWMNL
                     LLKTYAFIGIFSHDGLINKILIALNIPSQSILFTAPAFIFVAAYIYIPFMLLPIYNSM
                     KDIPNQLFFAAQDLGANTFTVIRKVLLPLTAEGVKTGIQVTFIPALSLFMITRLIAGN
                     KVINIGTAIEEQFLVIQNFGMGSTIALFLVLFMALVMILTRSKHKGGASK"
     gene            9406..10218
                     /locus_tag="PTC28_001345"
     CDS             9406..10218
                     /locus_tag="PTC28_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5716635.1"
                     /translation="MRWYGKFYLIAMLVVLYLPIFFLMLYSFNSAGNMVQFEGFTWEH
                     YQTLFDNKRLLQVVFNTIAVALLAAGIATIIGIFGALLLYQLRNQTVKISLLTLNNVL
                     MVSSDVVIGASFLIMFTALGHFTGFGLGFTSVLISHIAFCIPIVVIIVLPKLYEMNDS
                     IMNAARDLGASEFQLLSKVVIPYIMPGIIGGFFMALTYSLDDFTVSFFVTGNGFSVLS
                     VEVYSMARRGISMEINAISTILFALIMLGLLIYQVIQRQKQKIQSNKRGVSL"
     gene            10215..11288
                     /locus_tag="PTC28_001346"
     CDS             10215..11288
                     /locus_tag="PTC28_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein"
                     /protein_id="HDK5716636.1"
                     /translation="MKQLIQLVGGALLLGLISLGVGYWINHDGIGGKQQEKLYVYNWG
                     EYIDPELLDQFEEETGIKVVYETFDSNEAMEAKIRNGGTHYDVAFPSDYTIEKMKKEH
                     LLRPLDHKKIPNMKHLDPYYMNQPFDRKNEYSMPYFFGTVGILYDKEKYEDIDFNSWN
                     ALKDPRLKNDVLLVDGAREIMGISLNSLGYSLNDKNPEHLKQAEQHLKTFAPNIRGVV
                     GDEIQMMLEQHEASAAVIWSGSAAPVFHEDERFDYVVPKEGSNLWFDNMVIPKTAQNV
                     EGAHKFINFLLDPEVNKQNTEWVEYATPNETARKQLPEEIRDDKRVYPTREEQQRLEV
                     YHDLGPDVLSEYNERFLNFKMAL"
     gene            11360..12382
                     /locus_tag="PTC28_001347"
     CDS             11360..12382
                     /locus_tag="PTC28_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HDK5716637.1"
                     /translation="MTGETYTHISRPVNRLAEKILGWLSWLLLLGTTVVAMFFGLVLF
                     SNESSIQSLENSIANNATLQELLTNNNMNATQFVIMLQNGVWAFIVYLIICLLISFLA
                     LISMNHRIVSGLLFLLVAIVTLPLFFILVPLFFFIIALMMFVRKEKYEAVPTYYDEGY
                     SYGPYATHEPQDYQQHETYREPVAYTENERPSNESYRTYEETPAYDSSVVNADEPEVL
                     SRSAKYHQKSQKHREVSQADDMADEANDTLVYDSRAMSRNVEQRQHDDELTTDTDIED
                     EAASMSRAEMKQQRKEEKKARKAYEKEQRKLRPSASSQRRQNYDDRMKLQQDRSKSDS
                     QVDKDQ"
     gene            12609..13117
                     /locus_tag="PTC28_001348"
                     /pseudo
     CDS             12609..13117
                     /locus_tag="PTC28_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220275.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
     gene            complement(13813..14424)
                     /locus_tag="PTC28_001349"
     CDS             complement(13813..14424)
                     /locus_tag="PTC28_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1054 domain-containing protein"
                     /protein_id="HDK5716638.1"
                     /translation="MTKYIFKPKDFKVFQIEGLDARMEGLEKQIRPQLNALGDYFADY
                     LETVTGETFYAHVAKHARRKVNPPKDTWVAFATNKRGYKMLPHFQIGLFEDHLFVMYG
                     VMHEDPNKAEDVKVFEQKLDTLLNLPEDFQISLDHMQPTKSRIQDMSQEEIEAGITRA
                     KNVKKGEFFVARAITPQSEHLKSDRKFIAFLEDTFEQLLKFYQ"
     gene            14542..15360
                     /locus_tag="PTC28_001350"
     CDS             14542..15360
                     /locus_tag="PTC28_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HDK5716639.1"
                     /translation="MHLYDYAKSLVLEAGNNVRKWMVEDLAIEEKSNPNDLVTNVDKA
                     IEQFIVQQIQESYPHHRIIGEEGHGHDIESTEGVVWVIDPIDGTLNFIHQGENFAVSV
                     GIFKDGKPYAGFVYDVMADLLYHAKVGHGAYINQNAIPQLEGTQVRESIIGMNPNWLT
                     KPILSSILQPIISDSRSARAYGSAALEIVYVATGQLAAYLTPRLQPWDYAGGMIILNE
                     VGGVATNFAGEPLSITAPNSILMGNAQVHEEIRRDYLQGYDHVLTALQQKFKRK"
     gene            complement(15588..15773)
                     /locus_tag="PTC28_001351"
     CDS             complement(15588..15773)
                     /locus_tag="PTC28_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlaF family protein"
                     /protein_id="HDK5716640.1"
                     /translation="MKKSQSIFLILAIIAVFFLTMFSFAVAATNIFWMIATFILMVVT
                     FGVGFTLKKKYRENDWL"
     gene            15870..17720
                     /gene="typA"
                     /locus_tag="PTC28_001352"
     CDS             15870..17720
                     /gene="typA"
                     /locus_tag="PTC28_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HDK5716641.1"
                     /translation="MTKFREDVRNIAIIAHVDHGKTTLVDELLKQSGIFRENERVEER
                     AMDSNDLERERGITILAKNTAVDYKDTRINILDTPGHADFGGEVERIMKMVDGVVLVV
                     DAYEGTMPQTRFVLKKALEQNLKPVVVVNKIDKPSARPEGVVDEVLDLFIELDANDEQ
                     LDFPVVYASAINGTASLDPEKQDENMQSLYETILEYVPAPVDNRDEPLQFQPALLDYN
                     DYVGRIGIGRIFRGTMRVGESVSLIKLDGTVKNFRVTKIFGYFGLKREEIQEAYAGDL
                     IAVSGMEDINVGETITPQDHQEALPVLRIDEPTLEMTFRVNNSPFAGREGQFVTARQI
                     QERLDNQLETDVSLKVTPTDSPDAWTVAGRGELHLSILIENMRREGFELQVSKPQVIL
                     KDIDGVLHEPFERVQTEVPEEYAGAIIESLGQRKGEMVDMVTTDNGLTRLIFNVPARG
                     LIGYTTEFMSMTRGYGIINHTFDEFRPRIKGRIGGRRNGVLVSMDQGSASEYAILGLE
                     DRGINFMEPGTEVYEGMIVGQNNRENDLTVNITKVKHQTNVRSATKDQTETMKKPRKL
                     SLEEALEFINDDELVEVTPENVRLRKKILNKGQREKEAKRIKQMMESEEN"
BASE COUNT         6002 a         2959 c         3778 g         5192 t
ORIGIN      
        1 cagataagga ggtctccaga atgaaatttc ataaaacaat tggagtagca gttgcaacaa
       61 catttttatt ggcagcttgt agcaaagatg gtgaacatat tgaaaagtac aatgacggac
      121 ttgaaaatat gcaaaaagct gaagcaccga ttcaagaagt taataaagaa atgaataaac
      181 ttgagaaaga aaaagaaaag ctatcaaaag aaattagtgg taaaaacatt gctgaagtac
      241 aagataaagt ggatcaagta ctcgataatg cgaaaaagcg tgaaaagcaa ttaaaaaaag
      301 aagttgaagc gatgaatcat tctaaaaaag ctttcgaaaa ggcaaaagca gagtcgaaca
      361 aaattgaaga tgaagatgat aaaaaagagt ttgatgaatt gaacaaagcc attgaagaaa
      421 aaaataaaaa acacgatgct ttcgttaaag gctatcaaga tgtcatcaac aaagaaaaag
      481 atttgttcag ttattttaaa gaagattcag gttcacaaga ggaagtcgac aaacgttcta
      541 aagcgttatc tgatgttcaa aaaaatatgc agaaaaaagt agaggactat acaaaagcga
      601 ttcgtaaagt acaaacagaa aagcaagacg ttgatgaaat cgctaacaaa taactataac
      661 agtttgaaag gattggtata acagttgctt ctactgttgt gttatcaagt gttacagaac
      721 tttaggaaaa ctgtttaaca gttcatatat tttgtgttac actagagtaa gtcgaatgtt
      781 atttatttta tatacgggaa aggtatggtg aattgcatgg ttactaagtt aaacaaccag
      841 ttcgatgctg aaaaagtatt gaaagatact gaggcaaaat ttgaaatggt tcaaatctta
      901 gatgcagatg gaaatgtaac aaatgaagat ttacttccgg acttatcgga tgagcagtta
      961 gtagaattaa tgagaagaat ggtttggaca cgtattttag accaacgttc aatctcatta
     1021 aatagacaag gacgtttagg tttctatgca ccaactgctg gtcaagaagc atcacaactt
     1081 gcttcacaat tcgcattaga gcaagaagac tttattcttc ctggttaccg tgatgtacca
     1141 caattaattt ggcatggatt accattaaca aaagctttct tattctcacg tggtcacttc
     1201 gtagggaacc aaatgcctga aggtgtgaac gcgttaagtc cacaaatcat tatcggtgcg
     1261 caatacatcc aaacagctgg tgttgcatta ggacttaaaa aacgcggtaa aaaagcagtt
     1321 gcgattacgt atacaggaga cggtggttct tcacaaggtg atttctatga aggtatcaac
     1381 tttgcttcag cgtacaaagt gcctgcaatt ttcgtgattc aaaataacaa ttacgcgatt
     1441 tcaacaccgc gtgataaaca aactgcagcg caaacattgg ctcaaaaagc gattgcagta
     1501 ggtatccctg gtattcaagt tgacggtatg gatgcattag cagtatacca agcaacgaaa
     1561 gaagctcgcg accgtgctat caatggtgaa ggtccaacat taatcgagac aatgacatat
     1621 cgttatggtc cgcatacaat ggctggggac gacccaacga aatacagaac atctgatgaa
     1681 gattcagagt gggagaaaaa agatccactt gttcgcttca gaaaattctt agaaaacaaa
     1741 ggcttatggt ctgaagaaaa agaaaatgaa gtgattgaac aagctaaaaa tgaaatcaaa
     1801 gctgcgatca aagaggctga cagcactgaa aaacaaacag tgacttcatt aatggaaatc
     1861 atgtatgaag agatgcctgc aaacttaaaa gaacaatatg aaatctacaa agagaaggag
     1921 tcgaaatagg ccatggcaca aatgacaatg gttcaagcga ttaacaacgc gctagcaact
     1981 gaacttaaaa atgacgaaaa cactttgtta tttggtgaag acgttggtgt aaacggtggt
     2041 gtattccgtg taactgaggg cttgcaaaaa gaattcggtg aagaccgtgt atttgacacg
     2101 cctttagctg aatctggtat cggtggttta gcgttaggtc tttcaactca aggataccgt
     2161 ccaattatgg aagtccaatt cttaggtttc gtatttgaag tgttcgattc tgttgcagga
     2221 caaatcgcac gtcatcgttt ccgttcaggt aactcaaaag tagctccagt tacagttcgt
     2281 gcgccattcg gtggtggtgt acatacacca gaattgcacg ctgataactt agaaggtatt
     2341 ttagcgcaat caccaggttt aaaagtggtg attccatcag gtccatacga tgcaaaaggt
     2401 ttattaatcg aaagtatccg tagcaatgac ccagtcgtat atttagagca catgaaatta
     2461 taccgttcat tccgtgaaga agtacctgaa gaagagtaca caatcgaaat tggtaaagcg
     2521 aatgttaaac gtgaaggtac tgacttaaca atcatcactt atggtgcaat ggttcaagag
     2581 tcaatgaagg ctgctgaaga acttgaaaaa gatggccatt ctgttgaagt gattgactta
     2641 cgtacagttc aaccattaga cgttgacaca cttgtaaaat cagttgaaaa aacaggccgt
     2701 gttattgttg ttcaagaagc acaaaaacaa gcaggtgtag gtgcaaatgt tgtcgctgaa
     2761 ttatcagaac gtgcaattct ttcattagaa gcaccgatcg gccgtgttgc agcgccagat
     2821 acaatttatc catttacaca agctgaaaac gtttggttac caaacaaaac tgacatcgtt
     2881 gaacaagcga agaaaacttt agaattttaa tgtgtaattt ttgagaagag tggaaaagag
     2941 gactgtgaca tcagttttct gtcccacgcc cttgcatatg gagaatgaaa tgatttttcg
     3001 tttcttctcc tatatgtgtg taaacaaagt attatttata atttaattat ttaggaggaa
     3061 agaacgtggc atttgaattt agattacccg atattggtga aggtatccac gaaggtgaaa
     3121 tcgtaaagtg gttcgttaaa gctggagaca ctattgaaga agatgacgta ctatgtgaag
     3181 tacaaaatga taaatcagtt gtagaaatcc catcacctgt aagtggtaca gtacttgaag
     3241 tgttagttga agaaggtact gtagctgttg taggtgacat cattgttaaa atagatgcac
     3301 ctgacgctga agaaatggag ttcaaaggcg gacatagtaa tgatgcgcct gcaaaagctg
     3361 aagaagctaa agaagaagca cctcaagaag aagcggcacc agctgctcaa gaagctgtag
     3421 aagtggatga aaacagacaa gtaaaagcaa tgccatcagt gcgtaaatat gcacgtgaca
     3481 ataatgtgaa cattaaagct gttaatggta caggtaaaaa tggtagaatt actaaagaag
     3541 atgtagatgc atacttaaat ggtggcgaac aagcagcgac agcccaagat actgcatcag
     3601 ctgaatcttc agaagcatca actgcaccag cagcatcagc accagcagtt tcaactgaag
     3661 gtgaattccc tgaaacaact gagaaaatct ctgcaatgcg taaagcaatc gcaaaagcaa
     3721 tggtgaactc taagcatact gcacctcacg taacattaat ggacgaaatt gatgttcaag
     3781 agttatggga tcaccgtaag aaattcaaag aaattgcagc tgaacaaggt actaaattaa
     3841 catttttacc ttatgttgtt aaagctttag tatcagcatt gaaaaaatac ccagcactta
     3901 acacttcatt taacgaagaa gctggcgaag ttgtacaaaa acattactgg aacattggta
     3961 tcgcagcaga cactgacaga ggtcttttag tacctgttgt taaacatgct gaccgtaaat
     4021 caatcttcca aatctcagat gaaattaacg aacttgctgt caaagctcgt gacggtaaat
     4081 taacatctga cgaaatgaaa ggtgcaacat gtacaattag taacatcggt tctgcaggtg
     4141 gccaatggtt cacaccagtt atcaaccacc cagaagttgc aatcttaggt attggtcgaa
     4201 tcgctcaaaa accaatcgtt aaagatggcg aaatcgttgc agcacctgtg ttagcattat
     4261 cactaagctt tgaccacaga caaattgatg gtgcaactgg tcaaaacgca atgaaccaca
     4321 tcaaacgttt attaaacaat ccagaactat tattaatgga ggggtaaaat atggtagtcg
     4381 gagattttcc aattgaaaca gatactattg tcattggggc aggtcctggt ggctatgttg
     4441 cagcaatccg tgcagcacag ttaggtcaaa aagtaacgat cgttgaaaaa ggcaatttag
     4501 gtggcgtatg cttaaacgta ggttgtattc cttcaaaagc attgttaaac gtatctcacc
     4561 gtttcgaaca agcgcaacat ggtgcggact taggtatcac agctgagaat gtatctttag
     4621 atttcgataa agtacaatct tttaaaggtt cagttgttag caaattaact ggcggtgttg
     4681 aatcattatt aaaaggaaac aaagttgaaa tcgttcgcgg tgaagcttac ttcgttgatg
     4741 aacacagctt acgtgtaatg gacgataaga gcgcacaaac ttacaacttc aaaaatgcca
     4801 tcgtagcaac aggttcacgt ccaattcaaa ttcctaactt cgaatttggt ggtcgtatcc
     4861 ttgactctac tggtgcgtta aacttacaag aagtgcctaa aaaattagtt gtcgttggtg
     4921 gcggctacat cggttcagaa ttaggtactg cctatgctaa cttcggtact gaagtgacaa
     4981 ttcttgaagg tgcaaaagaa atccttggtg gtttcgaaaa acaaatggtt gcaccagtta
     5041 aaaaagaaat gaaagcaaaa ggcatgatca tcgaaacaga agctttagct aaatcagctg
     5101 aagaaactga taatggtgtt aaagtgactt acgaagttaa aggtgaagaa aaaacaatcg
     5161 aagctgacta cgtattagta actgtaggtc gtcgtccaaa cactgacgaa cttggtttag
     5221 aagaagttgg cgtgaaatta actgaccgcg gtttagttga agttgacaaa caaagccgta
     5281 catctgttga cagtatctat gcaattggtg atatcgttcc aggcttacca ctcgcacaca
     5341 aagcaagcta cgaagctaaa gtagcagctg aagcgattgc aggacaaaat tcagaagtgg
     5401 attacatcgg tatgcctgca gtatgtttca ctgagccaga attagcacaa gtaggttata
     5461 ctgaagcaca agcgaaagaa gaaggtcttg atatcaaagc ttctaaattc ccttaccaag
     5521 caaacggccg tgcattatca ttaaatgata caaacggttt cgttaaactt gtgacgctta
     5581 aagaagatga cacgcttatt ggtgcacaag ttgtgggtac aaacgcttca gacgttatcg
     5641 ctgaacttgg tttagcaatt gaagcgggta tgaatgctga agatatcgct ttaacagttc
     5701 atgctcaccc aacattaggt gaaatgagca tggaagctgc tgaaaaagtt ttaggtttac
     5761 caattcacac aatgtaataa tagttgaata gataaggggc tgtgcagaat tgtgcagtct
     5821 cttttttatt taatagaatt tgttgtttgg ttatgggtta cttaaataaa tttgtttgct
     5881 cgctttttca aaacatttta tatacatgtt tgaattaaac atgctttgtt tgaacacgca
     5941 tatacacaac aacatgatat aaagcgaata gaagcgcaat ggggttggta taccaggttt
     6001 tcccagtccc aatcctattg atggatttgt agccattatt gatgacagaa cagacataaa
     6061 acgaggatga attggatata aaacatagat gctattgatt tacttgatga cataaactct
     6121 ccttcatctt ccgctttatt tgttgtaagg ttgcccagaa tgctgaccct cttgatagaa
     6181 tgcgtgcata ctgctaacaa ccacttcttt actttaatag tgattactat ttattgcagt
     6241 tactgtcaga cttctcaagg cactcgcttt tgagaagccg agtcatcctt acgggtgcag
     6301 tacgacgaaa tctttgttga acatgagatt tctgtactga tcccaagatt cactaacgcc
     6361 gcaacaaatg taaccgttta atcaaacttt agcgagttaa agggacagca ccttggaaag
     6421 ggaagcataa aggtaatcaa aagtataaat agcaagaaga gggcaagtta gacaaaataa
     6481 tgtatcaata gtatcattat ttttattttc cctacccaag cactttaaaa ctggcacaaa
     6541 atgatttata gtcaacataa aagttcaatc ataaaggagt gaaatgatgg aatacacata
     6601 tccgatagat gtcgattggt ctcaagaaga aatggtggct gtcgtctcat tttttaacgc
     6661 catcgaatcg tattacgaaa gccaaattga acgtgacaca ctcatgacac gataccgaga
     6721 atttaaacaa gttgtcccag gcaaagcaga cgaaaaaaat ctcctcaatg attttaaaaa
     6781 gcagagtggc tacgacagtt atcaagtcat tcaagaagcg aaacaacatc ctgatcaaaa
     6841 aactttaaag aacagctaaa aaggtattgt aatttagtgc gcgatttgtt atttttatta
     6901 agcattaaac aaaatgttta gtaaaagtaa acaagtcgct ttttttgagt ggagggactc
     6961 tatggagatt ggacaaaaga taaaaaattt aagacgttta aaaaacttaa cgcaagagga
     7021 acttggagaa cgcacggatc tatctaaagg ttatatttct caaatagaaa gtaataaaac
     7081 gtcacccaat atggaaactt ttttaaatat tttagaggtg cttggaacgt caccacgcga
     7141 tttttttgat gacaaacaag tagcgaaagt gcattatccg aaaagtgaac agttaagtta
     7201 ttgtgaagat gaaaagggat attatttgca gtggcctgtg aagcgttcaa atgagtttga
     7261 tatggagcca ttattgctca cattagaacc acacgcatca tataaagatt ttcagccctc
     7321 aacatcagat actttcgtct attgtttaga aggggcagtg actttaactt taggggagca
     7381 acaatatact gcagaaaagg gagatgcatt atattttaaa gcgctggcta ctcatcgttt
     7441 atcgaataca agtcaagtga gtgcgaaatt gatgattgtt gcaacgtcat cgtatttata
     7501 ggaggtttta aagaattgag tgaattacta aagtttaaaa atgttacaaa aaagtatgat
     7561 acaacgacca ttttgaatga tattgattta gaaatcgaat caggacattt ttataccatt
     7621 ttaggaccat caggttgtgg taaaacgaca atgttgaagt tgattgctgg ctttgaaacc
     7681 cccgatgcag gagaagtgat ttatttaggg aaaaacatta atcaacttcc agcgaatcaa
     7741 cgtcaagtga acacagtttt ccaagactat gcgttgtttc cacatttgaa cgtctatgat
     7801 aacgttgcat ttggattgaa gttaaaaaag atgaaaaaag atcaaatcga gaaaaaagtg
     7861 atagaagcgt taaagctcgt taaattagaa gactatatgt acagtgagat tcatgcgtta
     7921 agtgggggcc aaaagcaacg tattgcaatg gcacgggcaa ttgtcaatga acctgaaatc
     7981 ttgttattag atgagtcttt atcggcgctc gatttaaagt tacgtactga gatgcaatat
     8041 gagttgcgcg aattacaatc acgcttaggc attacgttcg tattcgttac acatgatcag
     8101 gaggaagccc ttgctttgag tgactttatt tttgtcatgc gcgcaggtaa aatcgaacag
     8161 tttggaacgc cgcttgatat ttatgatgag ccggtcaatc gcttcgtagc agactttatt
     8221 ggcgagtcga acattgttga gggaacgatg atcaaagact atgtggtgaa catttacggc
     8281 caagattttg actgtgttga taaagatatt ccacctcaaa ctttagttga tgttgtcatt
     8341 cgcccagaag atattacact cgtaccggaa gaacaagggc tatttaaagc gactgtgacg
     8401 agctcgttat ttagaggcgt gcattatgag atgatttgtg aagatcgcaa aggctatgag
     8461 tggatgattc agtcaacgaa aaacgcagag attggtacac gcgtaggttt agactttgaa
     8521 cctgaagcga ttcatatcat ggtaccgggt gaaacagaag aagagttcga caaacgtatt
     8581 gaaggttatg gagatttgaa ccatgaaaca tattaatcgt tggctcgcta taccgtattt
     8641 actttggatg gttttcttca ttgtcattcc agtcatatta ctttgttact tttcatttgt
     8701 tgacgatcat gggcacttca cattgatgaa ttacgaacag tttttctctg tccgttatat
     8761 gagaatgcta tttgaatcta ttgtttatgc gacgttaatt acgctgatat gtttattagt
     8821 aagttatccc gcagcttact tcattcatca atctcgtcac gccgcgtctt ggttgttggt
     8881 gatgattatt ccaacatgga tgaatttact acttaagaca tatgcattca ttgggatttt
     8941 cagtcatgat ggtcttatca ataaaatctt gatagcttta aacattccat ctcaatcgat
     9001 tttatttact gcacctgcat ttatttttgt agcggcgtat atttatattc cattcatgtt
     9061 gttgccaata tacaacagta tgaaagatat cccaaaccag ctgtttttcg cagcacaaga
     9121 tttaggggcg aatacgttta ctgtcattcg taaagtgctg cttcctttaa cggcggaagg
     9181 ggtcaaaaca gggattcaag tcacatttat tcctgcgttg tcactcttca tgattacgag
     9241 actgatcgct ggtaacaaag tcatcaatat tggtacagcg attgaagagc aatttttagt
     9301 cattcaaaac tttggaatgg gttcgacaat tgcgctcttc ttagtgttgt tcatggcatt
     9361 ggttatgatt ttaacacgca gtaagcataa gggaggcgct tcaaaatgag atggtatgga
     9421 aagttttatt taattgcaat gttagttgta ctgtacttgc ctattttctt tttaatgctg
     9481 tactcgttta atagtgcagg caatatggtg cagtttgaag ggtttacttg ggaacattat
     9541 caaacgttat tcgacaacaa acgtttactt caagttgtgt tcaacacgat tgcggtggcg
     9601 ttattagcag ctggtattgc gacgatcatt gggatattcg gtgcgttgtt attgtatcaa
     9661 ttgcgtaatc aaaccgttaa aatttcgtta ttaacgttaa ataatgtgct catggtatca
     9721 tcagatgttg tgatcggtgc gtcattttta attatgttta ctgcactagg acattttaca
     9781 ggatttggat taggttttac gtctgttctc atctcacata tcgcgttttg tattccaatc
     9841 gtggtcatta tcgtattgcc aaagttatat gaaatgaacg attcgattat gaatgcagca
     9901 cgagatttag gagcatcaga gtttcaattg ttaagtaaag ttgtgattcc atacattatg
     9961 ccgggaatta tcggtggctt tttcatggca ttaacgtact cattagatga ttttacagta
    10021 agtttcttcg ttaccggaaa tggtttcagt gtgttatctg tagaagttta ttctatggca
    10081 cgtcgtggta ttagtatgga aatcaatgcg atctctacca ttttgtttgc gttaattatg
    10141 ctcggtttat tgatttatca agtcattcaa cgtcaaaaac aaaaaattca atccaataaa
    10201 agaggtgtgt cattatgaaa caattaatac agctcgttgg tggtgcactg ctattgggtt
    10261 taattagttt aggtgtcggg tattggatta atcatgacgg tataggtggc aaacaacaag
    10321 agaagcttta cgtctacaac tggggagaat acattgaccc tgagttgtta gaccaatttg
    10381 aagaagaaac gggtattaaa gtcgtctatg aaacatttga ttcaaacgag gcgatggaag
    10441 caaaaattcg aaatggcggc acgcattatg acgtcgcatt tccgagtgac tataccattg
    10501 aaaagatgaa aaaagaacat ttattacgac cgctcgatca taaaaagatt cctaatatga
    10561 agcacctcga tccgtattat atgaatcaac cattcgatcg taaaaatgaa tattcgatgc
    10621 catacttttt tggtacggtg gggattttat atgataaaga aaaatatgaa gatattgatt
    10681 tcaacagctg gaatgctttg aaagatccaa gacttaaaaa tgatgtgctc ttagtcgatg
    10741 gtgcacgtga aattatgggt atttcattga atagtttagg gtatagttta aatgataaaa
    10801 acccggaaca tctcaaacaa gcggaacagc atctgaaaac ctttgcgcca aacattcgtg
    10861 gtgtggtagg ggatgagatt caaatgatgc ttgaacaaca tgaagcgagt gccgctgtca
    10921 tttggagtgg gtcggcagcc cctgttttcc atgaagatga acgctttgat tatgtagttc
    10981 cgaaagaagg ttccaatttg tggtttgata atatggtcat tcctaaaaca gcacaaaatg
    11041 tggaaggcgc gcacaagttt attaatttct tgttagaccc agaagtgaat aaacaaaata
    11101 ccgaatgggt agaatacgca acccctaatg aaacagcgag aaagcaatta ccagaagaga
    11161 ttcgcgatga taaacgtgta tacccgacac gtgaagaaca acaaagatta gaggtttatc
    11221 atgatttagg accagatgtt ttaagcgaat acaacgaacg ttttcttaat tttaaaatgg
    11281 cgctttaact gcgaatgtag tgatttcgcc aaagtttagt tataatgagg agagtaagat
    11341 aaatatgagg agtgaaagca tgacgggaga aacatataca catattagtc gtcctgtaaa
    11401 tcgactcgcc gaaaaaatat taggttggtt gagttggcta ttgctgctag gtactactgt
    11461 agtcgcgatg ttttttggct tagttttgtt tagtaatgaa agttcaattc aaagtttaga
    11521 aaacagtatt gctaataacg cgacattaca agagttatta accaacaata atatgaatgc
    11581 gacacagttt gttatcatgt tacaaaacgg tgtatgggca tttatcgtat atttaatcat
    11641 atgtctgttg atttcattcc tagcgttgat ttcaatgaat catcgtatcg tatcaggttt
    11701 gttatttttg cttgtagcaa tcgtgacttt accgttattc tttattttag taccactctt
    11761 cttctttatc attgcgctca tgatgttcgt tcgaaaagag aagtatgaag cggtgccgac
    11821 gtattacgat gagggttact catatggacc atatgcgact catgaaccac aagactatca
    11881 acaacatgag acgtatcgtg aacctgttgc atacacagaa aatgaacgtc catcaaatga
    11941 atcatatcga acttatgaag aaacaccagc ttatgattct tcggtagtca atgccgatga
    12001 accagaagtg ttatctcgct ctgctaaata ccatcaaaaa tcacaaaagc atcgagaggt
    12061 ttcacaagca gatgatatgg cagatgaagc gaacgataca ttagtgtatg acagtcgagc
    12121 gatgtcaaga aatgtcgagc aacgtcaaca tgatgatgaa ctgacgacag atactgatat
    12181 agaagatgag gcggcatcga tgtctagagc ggaaatgaaa caacagcgta aagaagaaaa
    12241 gaaagcgcgt aaagcatatg aaaaagaaca acgtaagctt cgaccaagtg cttcctcaca
    12301 acgacgtcaa aattatgatg atcggatgaa attacaacaa gaccgttcaa aaagtgattc
    12361 acaagtagac aaggatcaat aatatcaaaa aagcggatag gtcacttgat gtgatacaca
    12421 cggcgacacg cactttgagt ggagtcagac atgtatgaca tgaaagattg cctatccgct
    12481 ttgttatgtc atattatttt atagatagat acacatataa atttaaagtg ataaatttag
    12541 tgaaaaaaat taaagtatgg tttattttaa ttaaaacagg taatatacta atcaaggagg
    12601 gtttttagat gacaaatcaa tatacgtata atgaacaaca gcataatcaa atgcattcaa
    12661 acgatttgaa cgggacacaa aagccgttta aacgcacagt tgaaaaagta ttaacttggg
    12721 ttggaattgt gttacatatt gtttggattt tgcttttagt aggttttgta aaagtaattc
    12781 agacacctga attccaacaa gaaattcaag caacaggtca agatattgca cagatagaga
    12841 atttagggtc aagtacattt ttattagcat taattccgct tgtattcgcg attgttgcag
    12901 tgtttatctt taaaaagaac attttagctg ggattctgtt aattttagca gctgcgacag
    12961 gtttgttttt aacgatgagc ttaatttcag cagtattaac cgagaaaatc acgacgaaga
    13021 acgcaatggt tttgaacaaa atattaaaga cgatacaaca gatttaaaaa aagatttgaa
    13081 cgatagtaaa gacgatacag aagaccgtct gcgttaatca ttcgaaatct caagtatgtt
    13141 taggttttat cctagaatac ttgggatttt ttatttttga gacattgtgt tgcaacgtta
    13201 ttttgttttc atgaatttaa gtacgaaaac aagacgtaag gggatttgaa aataaaaaat
    13261 ggaaaaaggg tgggacatag aaagttttta gccgtaatcc attcataggt tgatgattca
    13321 ttaatgactt taaagcagtc ggaaaatgag tgtaaatagg atacaaaaaa tgatgctatt
    13381 gctttctagt tttcatacac ttacccttaa ttttgctgta attgatatca aattgtccag
    13441 agggatgaga cgcctaaggg aatgcataca tactgctagt agtgacggct tctctttcat
    13501 agtggttact gtttatcgca gtagctgtct gacttctcaa tggcatacgc ttttgagaag
    13561 tcgagtcagc cgtgcggggg gcagtacgac gaaatctttg ttgtacatgt gatttctgaa
    13621 ctgctcccaa aatccattaa catctcaaca aatgtaacag tttaatcaag ctgagttgag
    13681 ttgaaggcct agcccctaag aaacaagcca tgagggcaat cataaacaca attcgtggga
    13741 gaggacaagt ttaacaagaa tattgcatca atagcatcaa aattttgtgt cttataccta
    13801 caaattttgg tgttattgat aaaattttaa taattgctca aacgtgtctt ctaaaaaggc
    13861 aatgaattta cgatctgatt ttaaatgttc agattgtggc gtgatagcac gagccacaaa
    13921 aaattcgcct tttttcacat tttttgcacg cgtgatgcct gcttcaattt cttcttggga
    13981 catgtcttga atacgtgatt tcgtcggttg catatggtct aacgaaattt ggaagtcttc
    14041 aggcaagttg agtaatgtat ctaacttttg ctcgaacact tttacgtcct ccgctttgtt
    14101 tggatcctcg tgcatcacac catacattac aaacaaatgg tcttcaaata aaccgatttg
    14161 gaaatgaggt agcattttat aaccgcgttt atttgtagca aatgccaccc atgtgtcttt
    14221 agggggattc actttacgac gtgcatgttt cgccacgtgc gcataaaatg tttcgcctgt
    14281 tactgtttct aggtaatctg caaaatagtc acctaaagcg ttcaattgtg gacggatttg
    14341 cttttcgagc ccttccattc gtgcgtcaag tccttcaatt tgaaaaactt tgaaatcttt
    14401 tggtttaaat atgtatttcg tcatggattg acctccttat cgtatgtcta tgaaattgct
    14461 tttattgtag catattacag tcgtttgaac atttaaattg aatcaaatta gtgtataata
    14521 aatgcaatag gagtgaggca aatgcattta tatgattatg cgaaaagtct agtattagaa
    14581 gcggggaata atgttcgaaa atggatggtg gaagacctcg ctatagaaga aaaatcaaat
    14641 ccaaatgatc ttgttacgaa tgtagataaa gcgattgaac aattcatcgt acaacaaatt
    14701 caagaaagtt atccgcacca tcgtattatc ggtgaagaag gacacggcca tgatattgag
    14761 tcgactgaag gtgtcgtttg ggtcattgat cccatcgatg gcacgcttaa tttcattcat
    14821 caaggcgaga attttgcggt ttctgtaggt atttttaaag atggcaagcc ctatgctgga
    14881 tttgtttatg atgtaatggc tgatttattg tatcatgcta aagtaggtca cggcgcttac
    14941 attaatcaaa atgcaattcc acaactagag ggtacgcaag ttcgtgaaag tattatcggt
    15001 atgaatccga actggttaac gaaaccgatt ttaagctcga ttttacagcc gattattagt
    15061 gactcgagaa gtgcacgtgc gtatggttca gctgcattag aaattgttta tgtcgcgact
    15121 ggtcaacttg cggcgtattt aacaccacga ttacagcctt gggattatgc aggtggtatg
    15181 attattttaa atgaagtcgg tggtgtggca actaactttg ccggagagcc gttatcaatc
    15241 acagcgccaa actctatttt aatggggaat gcgcaagtcc acgaagaaat tagacgtgac
    15301 tatttgcaag gttatgacca tgtgttaacc gctttacaac aaaagtttaa acgtaaataa
    15361 acattgagct atcacaatta aaatgatttg aatacataca tcgctacaaa gatattcaat
    15421 gcgtagcggt gttttttatt gataaaaggg taatgggcat cgtcacataa aaaaatagtg
    15481 ccaatgattg ttcatcaagc actatcctat gtaaaagttt atcattctat cactgagccc
    15541 atgatgtggc atgcgtgttg tgatacgaag cgatgtgtaa atttcagtta taaccaatca
    15601 ttttcacgat atttcttttt taatgtaaag ccaacgccaa aagtaacgac cattaagata
    15661 aacgtagcaa tcatccaaaa aatgttcgtt gcagcaacgg caaagctaaa cattgttaaa
    15721 aagaatacag cgatgattgc aaggattaaa aaaatggatt gagatttttt cattatcagc
    15781 ccacctcact gtttcttcat tccatttcta tgatataata aacgagttgt aaaagaaagt
    15841 gataatttac ccgagaaagg aattacagta tgacaaaatt tagagaagat gttcgtaaca
    15901 ttgcgattat cgctcacgta gaccatggta aaacaacttt ggttgatgaa ttattaaaac
    15961 aatccggtat ttttagagaa aatgaacgtg tagaagaacg tgcgatggac tcaaatgatt
    16021 tggagagaga acgtggtatt acaattttag cgaaaaatac tgcggttgac tataaagata
    16081 cgagaatcaa tattttagat acgccagggc acgctgactt tggtggagaa gtagagcgta
    16141 taatgaaaat ggtagatggt gttgtattag tggttgacgc ttatgagggg acaatgccac
    16201 aaacacgttt cgtattgaaa aaagcgttag agcaaaactt aaaacctgtt gtcgttgtga
    16261 ataaaattga taaaccttca gcccgtccgg aaggggttgt cgatgaagtt ttggatttat
    16321 ttattgaatt agacgccaat gatgaacagc ttgatttccc tgtagtgtat gcttcggcga
    16381 ttaacggtac agcgagctta gacccagaga aacaagatga aaacatgcaa agtctatacg
    16441 aaacgatttt agagtatgtg ccagcgccag tagacaacag agatgaacca ttacaattcc
    16501 aacctgcatt attagactat aacgattatg taggacgtat cggtatcggt cgtattttca
    16561 gaggaacgat gcgtgtcggt gaaagtgtgt cattaattaa attagacggc actgtgaaaa
    16621 acttccgtgt aacgaaaata ttcggttatt tcggtctgaa acgtgaagaa atccaagaag
    16681 cttatgctgg agaccttatt gcagtatcgg gtatggaaga cattaacgtc ggtgaaacga
    16741 taacaccaca agatcatcaa gaagcgttac cagtattacg tattgatgaa ccaacacttg
    16801 aaatgacatt tagagttaat aattcacctt ttgctggtcg tgaaggacaa tttgtcactg
    16861 cacgtcaaat tcaagaacgt cttgataatc aattagaaac agacgtgtcc ttaaaagtga
    16921 cgccaactga ttcaccagat gcatggacag ttgccggtcg tggagagtta cacttatcta
    16981 ttttaattga aaatatgcgt cgtgaaggtt ttgaattaca agtttcgaaa ccacaagtta
    17041 ttttaaaaga cattgatggt gttttacatg aaccatttga acgcgtacaa actgaagtac
    17101 cagaagaata tgccggtgca attattgaat ctttaggtca acgtaaaggt gaaatggtcg
    17161 acatggtaac gacagacaat ggcttaacac gccttatctt taacgtccct gcacgtggct
    17221 taatcggtta tacgacagaa tttatgtcaa tgacacgtgg ttacggtatt atcaaccata
    17281 catttgatga atttagacca cgcattaaag gacgtatcgg tggccgtcgt aacggtgtac
    17341 ttgtctcaat ggaccaaggt tcagcgagtg aatatgcgat tttaggactt gaggaccgcg
    17401 gtatcaactt tatggaacca ggaactgaag tatacgaagg catgattgtt ggacaaaaca
    17461 accgtgaaaa tgatttaaca gtgaatatta caaaagttaa acatcaaaca aacgtgcgtt
    17521 cagcgacgaa agaccaaact gaaacgatga aaaagccacg taaattatca ttagaagaag
    17581 cattagaatt cattaatgat gatgagctcg tggaagtaac gcctgaaaat gtacgtttaa
    17641 gaaagaaaat cttaaataaa gggcaacgtg aaaaagaagc aaaacgtatc aaacaaatga
    17701 tggaatctga agaaaattaa tttaattcgt cattgaatca tattttgaaa gagcttggag
    17761 agtgaaaatc ttccggctct tttttaattt tttggagcca gtgcacattt ttgaatggta
    17821 gtcaatgctg atcacttttc tcttaaacag accgtaagcc atcgaggaaa tgggtatacg
    17881 ctcatttact ataaaccaat aaatgtctgt gacgacgtag tttttaccta t
//
LOCUS       DANHPA010000050        17687 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.050, whole genome shotgun sequence.
ACCESSION   DANHPA010000050 DANHPA010000000
VERSION     DANHPA010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 17687)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17687)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17687
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.050"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(53..1234)
                     /locus_tag="PTC28_001353"
     CDS             complement(53..1234)
                     /locus_tag="PTC28_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5716642.1"
                     /translation="MQNQEHQAFIKNYIFNFLVSFFVYFAMYLLIVVIAQYAIQRYDV
                     STGVAGLITGIFIVGALIGRFVGGRYIHEVGPKRLLMIGLVLFIITQCFYFIEGSLIF
                     LFVTRFLNGMALAIATTATGTIVPLIAPVERRGVAISLFSLSLVIGAAIGPFLGLYLA
                     GIYPTFVLFTVCLIVAILAFIFALFLKVNVKMADQQSDHQGFHISQFISVPAIPIALV
                     VLICGLGYASVLSFLQLYAVEINLTAVARYYFIFYAITSVFTRPFVGRILDRFHENWV
                     AYPALVIFGVGILILAIAHSGWALLLSGALVGIGYGSMTAVGNVVAVKVSRADQVGLA
                     TSTFFIGLDVGVGFGPALLGMILPAIGYRMMYVAIGIILLLCIILYAFIHGRRQPKVM
                     Q"
     gene            1750..3705
                     /locus_tag="PTC28_001354"
     CDS             1750..3705
                     /locus_tag="PTC28_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002499540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphatase class III"
                     /protein_id="HDK5716643.1"
                     /translation="MSSQTEKELKRQYLDLIAEKFDSEEKVATEIIHLESILDLPKGT
                     EHFVSDLHGEYHAFQHVLRNGSGNLQQKIHDIFKSRLDPQEMNELIALVYYPEEKIKR
                     IKNGFNTKSERHTWYEKTINRLLELVKYTSSKYTRSKLRKSLAPEYTFIIEELLYKSN
                     QFNNKKDYYDAILRQIIQLNQADKLIISLANTTQRLVVDHLHVVGDIYDRGPHPDKIM
                     DTLIDYHSVDIQWGNHDVLWMGAYSGSKVCLANLLRICARYDNLDIIEDAYGINLRPL
                     LTLAEKYYDDNEAFRPKKHPEKNPSESEILQITKIHQAIAMIQFKLEGPIIKRRPEFE
                     MNERLLLDRVDYRNRTIELNGKVHPIENTCFRTVDRRQPTALLEEEQEVMDKLLTSVQ
                     ESEKLRRHVDFLMKKGNLYLRYNGNLLIHGCIPIDEQGEMEGMTIDGRFLTGRELIDE
                     FEKHVRYAYEHKEVEDDLSTDLVWYLWTGKYSSLFGKRAMTTFERYFIKDKNTHKEVK
                     NPYYRLRENEDVVKKMLEEFDMNPEQGRIINGHTPVKERDGENPIKANGKMLVIDGGF
                     SKAYQSTTGIAGYTLLYNSFGMQLVAHQHFNSKEKLLETGEDELSIRRVVDKELERKL
                     IRDTNEGAELQKEIDMLKALMSYRYMK"
     gene            5134..6528
                     /locus_tag="PTC28_001355"
     CDS             5134..6528
                     /locus_tag="PTC28_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HDK5716644.1"
                     /translation="MINILEKLNAILWGAPSLILLTGTGLFLTFVLKGMQFTKLIHAF
                     KLAFVPNKKEAESEGDISNFKALMTSLAGMIGNGNIAGVATAVTLGGPGAIFWMWVVG
                     LLGMTTKYAEALLAMKFRVQNDKGEYSSGPMYYIEKGLGHRFKFLAIAFAIFGAFAAL
                     GIGNSVQSNTIADVMTNSFNVSGFITGIVLVILISLIIFGGLKRISNVAGFFVPMMAI
                     FYIGASVTILIINYDQILPAFGLIFKYAFTPVSAAGGFTGIMVMQAIQNGVSKGIFSN
                     EAGLGTVALISGNAKAGHPATQALVAMTGTFIVTIIVCTMTGLVLLVTGYWDPTGGLL
                     SGVSHDAKLEAGALTSMAFGASLGTLGEYVVSLSVIFFGFSTIIAWFVYGAKCFEYLF
                     GVKYVMLYGVIYVIATFVGTIANLKTVWLFADTANAMMMIPNLIGILFLYKIIKQETE
                     SYFKPNTQNYSKTS"
     gene            6885..7316
                     /locus_tag="PTC28_001356"
     CDS             6885..7316
                     /locus_tag="PTC28_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020006788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HDK5716645.1"
                     /translation="MMKQQAIEKINQVIEQSRIGVLSTAVNNKPNSRYMIFYNDDLDL
                     YTKTSRSTRKFEELTQNPDAHVLLGYEEGSGQPYVEIEGRVDIITNSKEIDWLWQEQD
                     HTFFDSKNDPDLVVLRIIPSHITLLNSDETATPFEIDVSQL"
     gene            7337..7715
                     /locus_tag="PTC28_001357"
                     /pseudo
     CDS             7337..7715
                     /locus_tag="PTC28_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166343.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
     gene            7864..8604
                     /locus_tag="PTC28_001358"
     CDS             7864..8604
                     /locus_tag="PTC28_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDK5716646.1"
                     /translation="MYTIKVVSELTGLSTRTLRYYDQIGLLNPSNSSEAGYRLYNEKD
                     IAQLQQIMIYKNMQLPLGQIKAVLEEDTLIEDTLNRHLHYLEQQQQQIAKQIKLIEKQ
                     LGGIEMTQEEKFSQLKADALSEINAKYGEELAQKYTSTQVKAQHEHFKNLTQDEYQSA
                     ESAEATLFLLLKTIEEQALPIAHPTAEQAFLAHQNWLKHMVPNYSTDYHQQLADLYIQ
                     DSRFSAYYKQYAGEQAPYILNKLIKHYT"
     gene            complement(9576..11354)
                     /locus_tag="PTC28_001359"
     CDS             complement(9576..11354)
                     /locus_tag="PTC28_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5716647.1"
                     /translation="MKQQESNPQLTTKEQTRTLYRLLRYTFPFKKLIFLTMTMLTLST
                     AASMSVPYLVKIFIDQYLTPRYFPGNDIVMLLIVFVGIQLIGAVTTYLSIYYLQYLAF
                     KVIQQLRIDAFKRISRLGMKFFDATPSGSIVSRLTNDTEAIVEMFTGVLSSFLIAFFM
                     ILASFTMMFVLDVRMAFFAILFTPLVFIVLAVYRKYASVYFYETRRRLSDLNAKLGES
                     IEGMKIIQVFNQEARLRDEFETINTSHYEYSMKTIRLDGMLLRPAITMLSTFSTVIIL
                     AYFGILSFSTTVTAGVVYAFIQYMQRFFEPVNQVSQNLNIFQQAIVSASRVFKMMDNP
                     THAPLQNPQGHSEITEGRIVFDDVSFSYDGEHDVLKHISFTVEPGQTVALVGHTGSGK
                     SSIINLFMRFYEFNRGNIFIDGQSIKTFPHEHLKRNMGLVLQDPFMFYGTVASNIKLY
                     HPTMTETEVEAAAEFVHAHSFIEQLDGGYNHKVIEKGSAFSSGQRQLIAFARTMAINP
                     KILILDEATANIDSETEEAIQQSLNRMRAGRTTIAIAHRLSTIQDADEILVLNQGEIV
                     ERGTHDALIAKGGIYYKMYQLQLKGE"
     gene            complement(11335..13128)
                     /locus_tag="PTC28_001360"
     CDS             complement(11335..13128)
                     /locus_tag="PTC28_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDK5716648.1"
                     /translation="MKVFKQLGWFLKREKWRYITALMALFVAALSSLIPPQIIGFVID
                     HITAKTLTPQNLTIYLLIIFSVGILVYGLRYFLRTRFFGASAKLGRILREQLYEKYTQ
                     MSPSFYQKYRTGDLMAHATNDIRAVQNTAGIGVMTISEAMITGGMTLLMMFVTISPKL
                     TLIAMIPLPILVISTSYYGRLLHKGFKEAQGAFSELNDKTQESIAGVKVTKSFGYETA
                     DEDDFRQLSDRVVAKNLVVSKIDALFDPTIELVIGASYLLSVVFGAYMVIDGSITIGQ
                     LITFTTYLGMLVWPLLALGFFFNIIQRGAASYDRIREIESVPSGIVTTYQNSDAPTGD
                     INFNLKQFQFEDTAHASLHDINFTIQQGMTVGIVGHTGAGKSLLIRLLLREFDTERPE
                     DIQYGHHPLRDYDIRKLRAQFGYVPQEHFLFSSTIRGNIAFSQPDIDDEAVHHASAMS
                     HIHQDILTLPLAYDTVVGERGVSLSGGQKQRISIARALLTHPQVLILDDALSAVDAET
                     ETAILGNLKKERQGKTNIITAHRMSAVMHADLIIVMRDGTIIERGTHDELLQQHGWYA
                     ETFQSQAMQSRLTQDLESEVNGGDMNETTRK"
     gene            complement(13284..14564)
                     /locus_tag="PTC28_001361"
     CDS             complement(13284..14564)
                     /locus_tag="PTC28_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HDK5716649.1"
                     /translation="MTTNLKERLDYEATFDCVQCGYCLPVCPTYVPFKSEKHSPRGRI
                     NLVKMAAEDKITLADMASGIDLCLGCRACETICPTHVRYGDILSSAVEVLREERPQSP
                     VEKVIRTVAFEGVLKSKKALRLVNKGLYFYQQTGIEKAVTATKILKPLPKYAQLQKML
                     PPVRPSHPIEESGHGARPHQMKVGFFQGCMMDAFFSEVNTLAMQIMRQHDVHVTNVPQ
                     QTCCGALQHHAGETAHTIVLAKENIVAYEQYDFDYIVNTIGGCGAALKEYHLLFEKGT
                     IWRQRAEQFVAKVRDISEIMAQIELEMTHEVAYRAVYQPSCHLENVQKVFEAPENVLK
                     RVPGLTLVEMPSQQMCCGSAGIYNLVHYDASMQILDHKMSNVKLARPELIITSNPGCH
                     LQMKLGVEREGLGQRVAVKHIVEVVAEACGIRAS"
     gene            complement(14554..15975)
                     /locus_tag="PTC28_001362"
     CDS             complement(14554..15975)
                     /locus_tag="PTC28_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HDK5716650.1"
                     /translation="MQQQRQLEIERRLRDIVGERVFVDVAQRVSYGYDGSFGQYLPDF
                     VTQPLATSEVQQIVKLANVYDLPIYPRGAGTNLSGGSLPVNGGIVLDFSQWNDEVTIY
                     PDDLIIKTRPGVKTADIHALAEQHQLMYPPDPSSSSVCTIGGNLAENAGGPHGVKYGV
                     TKDYVIGLEVVTAQGDIIRTGGNTIKNVTGYDLTKLLIGAEGTLGIITEATLRLIPKP
                     PATQTALIVFEDLGSAGRSISQILTSGVRPSKMEILDHHAINKVVDYAGIDLPRDAAA
                     LLLVEVDGDEAILPKELETIKAALAKMGVTQVKIAGSKAEEAELWQVRKAVSPAVVER
                     GFTKISEDATVPLSKIPHMFEKVDEIKQKYDLNLVVFGHAGDGNLHPTISANMRDPEA
                     VKNVERAVEEIFNYAIELGGTLSGEHGIGTMKKPFMTREFDPASLAFQKAIKDALDPD
                     HRLNPGKIFPATGETRLVLSHDD"
     gene            16196..16624
                     /locus_tag="PTC28_001363"
     CDS             16196..16624
                     /locus_tag="PTC28_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HDK5716651.1"
                     /translation="MSKFDHVQPPKHFARHHKTLIVTTRYQFTSDNRIYFSNTEHVDL
                     ENHTYTLEVEIWSKTDEHGMAVDFKDIDKVYREHLEPLLDGQLINDTLPDMNTTVENI
                     AHWIWLRFNEYLPEGVSLNTISLYETPEQGIKLTRNIMAQ"
     gene            complement(16915..17643)
                     /locus_tag="PTC28_001364"
     CDS             complement(16915..17643)
                     /locus_tag="PTC28_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HDK5716652.1"
                     /translation="MKRKISIILCLCFLLPILTLSSANAQQPSPGTQTIVDTQKDPNG
                     KLNARYDPSYMLYCSAVLITPNMWLTAKHCAGNQEKTGYIGAVYPGQSGASTPFGMMN
                     ISLYKPDPGVDIAILKGTETDKSSAYKYYIKGFKTGIVAYDLEGLKKLIGKKIYSYGY
                     PGDKGETKQYRSEGIITNVNPITKELSTSMPSSPGQSGSGVFLENGQFLGILYGNENR
                     TTYKSAKIQPIDQRLKTWIDNNKE"
BASE COUNT         5563 a         3632 c         3256 g         5236 t
ORIGIN      
        1 ttttttaaaa tactaattta ttattttttt ggttatttac tatgcttcgc aactattgca
       61 tcacttttgg ctgacgacgg ccgtgaataa aggcatataa aatgatacat aacaataaaa
      121 tgatacctat cgctacatac atcatacgat aaccgatagc aggtaaaatc atgccgagta
      181 acgctggacc aaaaccaacg ccaacatcta gtccgatgaa aaatgtggaa gttgcaagac
      241 cgacttgatc tgcacgtgat actttgacag ctacaacatt accgacagcc gtcatactac
      301 catagccaat accgactaat gcaccagaca ataacaatgc ccatccacta tgtgctatcg
      361 ctaatattaa tatacctaca ccaaatatca ctagtgcagg ataagcaacc caattttcat
      421 ggaagcgatc caaaatacga ccgacgaatg gacgtgtgaa aactgaagtg attgcataga
      481 agataaaata atagcgcgcc actgcagtta aattaatttc tacggcatac aattgtaaaa
      541 atgataaaac agaggcgtaa cctaaaccac aaatgaggac gacaagcgca atcggaatcg
      601 ctggtactga aataaattgc gaaatatgaa agccttggtg gtcagattgt tgatcagcca
      661 ttttgacatt gacttttaaa aacagtgcaa agatgaacgc taaaatcgca acaatgagac
      721 agactgtgaa taaaacgaat gttggataaa tgcctgctaa atataaccct aaaaacggac
      781 caatcgcggc acctatcact aaacttaaac taaacaaact aatcgctaca cctcgccgtt
      841 caacaggtgc aatcagtggc acaatcgttc ctgtcgcagt tgtcgcaatc gcaagcgcca
      901 tcccatttaa aaaacgagtc acaaataaaa agatgagact cccttcaatg aagtaaaaac
      961 attgcgtgat aataaataac actaatccaa tcatcaacaa tcgtttaggg cccacttcat
     1021 gaatatagcg cccacctacg aaacggccaa tcaatgcacc gacgataaaa atacccgtaa
     1081 tcaatcctgc aacaccggta gatacgtcat aacgttgaat ggcatattgc gcgataacaa
     1141 caataagtaa gtacatcgca aaataaacaa aaaaactgac taaaaagttg aagatataat
     1201 tttttataaa cgcttgatgc tcttgatttt gcactcaaat actcctttct catttcggtg
     1261 agctaagcta actaataact ttgacattat atcgcgctat tatcataaaa tcaagggcat
     1321 gacatacaaa atgcaaagtg tatcaataat attcaaaaag ttgagcatct tcattgtaga
     1381 caatctgtac ataatcaggt tcgtttaact tctataaata atgtggttta atagagttga
     1441 aacggttaga cacaggtcaa cttcatattt gataaataag ggcaacttgg cttgtcatga
     1501 tgattgaaga cgggtgagaa agattcgtat tgtgctggcc gtactacttt cattgaacgt
     1561 gctattgaac acaagaacac gtgcttcctt gattaatgca catcaagtac gcggaacacc
     1621 atttcccact gatgatcttc ctctatcaca caagttcatc cattttgagc tacttaaaca
     1681 aaagcagtat cattcatggc ctgcgataat ctaaaaaacg aacaatttat gggtaaagga
     1741 gaaattcata tgtcatctca aacagaaaaa gagttaaaaa ggcagtattt agatttaatc
     1801 gctgaaaaat tcgattcaga agaaaaagtt gcgactgaaa ttatccattt agagtcgatt
     1861 ttggatttac ctaaaggtac agaacacttt gtgagtgact tacacggtga atatcacgca
     1921 tttcaacatg tgttgcgtaa tggatctggt aatttacaac aaaagattca tgacattttc
     1981 aaatcacgat tagaccccca agaaatgaat gaattgattg cattagtcta ctatccagaa
     2041 gaaaaaatta agcgtattaa aaatggtttt aatacaaaaa gtgaacgtca cacatggtat
     2101 gaaaaaacga ttaatcgctt actagaatta gtaaaatata cctcttccaa atatacacgt
     2161 tcaaaattac gtaaatcatt agcgccagaa tatacattta tcattgaaga gttactctat
     2221 aaaagtaacc aattcaacaa caaaaaagat tattatgatg caattctgag acaaattatc
     2281 caattgaacc aagcggataa acttattatc agtcttgcaa atacgacaca aagattagtt
     2341 gtagatcatc tccacgtcgt tggtgatatt tacgaccgtg gtcctcaccc agacaaaatt
     2401 atggatacac tcattgatta ccattctgtc gatattcaat gggggaacca tgatgtttta
     2461 tggatgggtg cctactctgg ttcaaaggtg tgcctcgcga acttactccg catttgtgca
     2521 cgttacgaca atctcgacat tattgaagat gcttacggta ttaacttgcg tccattatta
     2581 acgctagccg aaaagtatta cgatgataat gaggcatttc gtccgaaaaa acatcctgag
     2641 aaaaatccat cagagtcaga aattttacag attactaaaa ttcatcaagc cattgcaatg
     2701 attcaattta aattggaagg accgattatt aaacgtcgtc ctgaatttga aatgaatgaa
     2761 cgtttactgc tcgatcgtgt ggattatcgc aaccgtacaa tcgaactgaa cggcaaagtc
     2821 catccgattg aaaatacatg ttttagaaca gtagaccgtc gccaacctac tgcattgctt
     2881 gaagaagagc aagaagtgat ggataagttg ctcacatctg tacaagaatc tgagaaattg
     2941 cgtcgtcatg tagacttctt aatgaaaaaa gggaacttgt acttacgtta caatggtaat
     3001 ttactcattc acggttgtat tcccattgac gagcaaggtg aaatggaagg tatgacaatt
     3061 gatggccgtt tcttgactgg acgtgaactg attgatgaat ttgaaaagca cgtccgttac
     3121 gcttatgaac ataaagaagt agaagatgac ctttcaacgg atttagtctg gtatttatgg
     3181 actggtaaat attcatcatt attcggtaaa cgtgcgatga cgacattcga gcgttacttt
     3241 attaaagaca agaacacgca taaagaagtg aaaaacccat actatcgttt gcgtgaaaat
     3301 gaagacgttg tgaaaaagat gttggaagaa ttcgacatga atcccgaaca aggtcgtatt
     3361 attaacggac atacacctgt gaaagagcgc gatggtgaaa atcctattaa agcaaacggt
     3421 aaaatgcttg ttattgacgg tggtttctct aaagcgtatc aatcgacgac aggtatcgcg
     3481 ggctacacgt tgctgtataa ctcgtttggt atgcagcttg tggcgcacca acattttaat
     3541 tcaaaagaga agttattaga gacaggtgaa gatgagttgt ctattcgtcg tgttgtggat
     3601 aaagagttgg agcgtaagtt gattcgagat acgaatgagg gggccgagtt gcagaaggag
     3661 attgatatgt tgaaagcgtt gatgtcgtat cgttatatga aatgacgtgg tatttgagaa
     3721 aatcacatgt agataaatga acgattcttt atattgaaat agctgttctt attgattggt
     3781 acctatactc gtgttcctag gcgatgaccc tacaactaac caacgctttg acttagctgt
     3841 tacatttgta gaggtagcgg ttgtggattt tgggagcagt acagaaatct catatacaac
     3901 aaagatttcg acgtactgcc cccgcaaggc tgactaggag ctgggacatt aagtttcctc
     3961 agctccttta ctatattttg ttgtgtatac caagggatgg ggcttgaaaa aattaagcct
     4021 caagccatac atagattgta tattcattaa tgactttaaa acggtcggaa aatcagcgtg
     4081 aatgggataa aaattgatgc tattgttttc ttaatttcat aaacttgcct tcagtactgt
     4141 gtatttgata taagactgcc cagaaggctg agactcctga gggatcagct ggtccggaaa
     4201 atccaattcg gctaccacca aatgtacact ataatcaagc cgaattgagt tgtagggcca
     4261 gcccctagga acgcgaagcc atgaagggaa tctaaagcca caaatcatag ggaggccaag
     4321 tttaacaaaa atattgcatc aatagcatca aaaattttta tgtcccatcc ccagacagat
     4381 actgcgataa acagtaacca ctatttaatt aaagaggcga ctgtcagcag tatgcactca
     4441 ttccctcagg agtctcgcca gatttacaat tcaataaggc agctttttta atgaatcgtt
     4501 cattctttca tttgaacaac aaaacaaata cacctctccc cttctattac catgcaattt
     4561 cactgttatg ggttgagcgt aggaaggatg aatatatctt tcgaagctct tgcaattttt
     4621 gttcaacatt tcaatattta aaaacacttt tcacatgcgc ttcttagttt cctttaacgc
     4681 accatccact ttctccttgt tgtgggggtg aaaaaaagtg cttattcctt tatgactgac
     4741 tagacttttc taaagctgta acacttcaaa tatagaatgt cccctcatct ataatgctag
     4801 ttttcatgca catgcttcat aaattttcga gtaaaaagaa ttcaatatgt tgatttctct
     4861 aatgtttgaa aatggaaatt caaataaaag tggtaatgtt tgaaagaaag gtgtaaaatt
     4921 tgagagtgcg tttttaattt acttgcatgc aatcaacaag atgtaatgcg gtaacatgcg
     4981 acgtgttatg ggaaatggca ttaccgatgt tgatatctat ttaatttaaa agagcaataa
     5041 ttagatttta gtattatttt acaattcaaa tctatgtgta ttataatgat gaaagcgttt
     5101 acttgagaga tgcaaatatt ggaggggtac agtgtgatta atatcctaga aaaattaaat
     5161 gcgatattat ggggcgcacc gagtctcatt ttattaacgg gaacggggtt gtttttaacc
     5221 tttgtgttga agggcatgca gttcacaaaa ctgattcatg ctttcaaact cgcctttgtt
     5281 cctaataaaa aagaagccga aagtgaaggt gatattagta actttaaagc gttgatgacg
     5341 tcacttgccg gtatgattgg taacgggaac atcgccggtg tcgcgacagc tgtcacttta
     5401 ggtggtccag gtgcgatttt ttggatgtgg gtcgttggtt tgcttggtat gacaacgaaa
     5461 tatgccgagg cgttgttagc gatgaagttc cgcgttcaaa atgataaagg tgaatattca
     5521 agtggtccga tgtattacat agaaaaaggg ttgggtcatc gtttcaaatt tttagcgatt
     5581 gcctttgcga tattcggtgc ctttgctgca ttaggtatcg ggaatagtgt gcaatccaat
     5641 acgattgctg acgttatgac gaatagcttt aacgtgagtg gtttcatcac tggaattgta
     5701 ttagtcattc tcatctcact cattattttt ggtggcctga aacgaattag taacgttgca
     5761 ggattcttcg ttccaatgat ggcgattttt tacattggtg catctgtgac aattctcatt
     5821 attaattacg atcaaatttt accggcattc ggtttaattt ttaaatatgc gttcacaccg
     5881 gtatctgctg ctggtggttt tactggcatt atggtcatgc aagcgattca aaatggtgta
     5941 tctaaaggga tcttttcaaa cgaagctggt ttaggtacgg tcgcattgat ttctggtaat
     6001 gctaaagccg gacatccagc gacacaagca cttgtagcta tgacaggtac atttatcgtg
     6061 acaatcattg tctgtacgat gacaggtctt gttttactcg taacaggtta ttgggatcca
     6121 acaggtggtt tattgtcagg cgtttcacat gatgcaaaat tagaagctgg cgcactgaca
     6181 agtatggcgt tcggcgcaag tttgggcact ttaggcgaat atgtcgtgtc actttcggtt
     6241 attttcttcg gattttctac cattatcgct tggttcgtgt acggtgcgaa atgtttcgaa
     6301 tatttattcg gtgtcaaata tgtcatgctt tatggcgtca tttatgtcat tgctacgttt
     6361 gtaggaacaa ttgctaacct taaaacagtg tggttgtttg cagatactgc taatgcgatg
     6421 atgatgattc caaacttaat cggtatttta ttcttatata aaatcattaa gcaagagact
     6481 gaatcttatt tcaaaccgaa tacacaaaac tattctaaaa catcatgata tgccaatgat
     6541 acgatctgtg tccttccaac agatcgtatc atttttttgc aatgctttat caacaaattt
     6601 gatgaaaagg cgatatatag acagataaaa atgaaacaat tgattagcag ttttatcact
     6661 ggtttcgtaa tatttataat gatactgatc acaggtgaca ctatagcatt tcctgcatta
     6721 ttatatggat ttgttggatt tgttgactct taggcaatat ttatgtcgta aaacatcaag
     6781 aacgacaaaa tcatcattca tgtcaataac ctcatgccat atcattctcc aatgccgctc
     6841 cgtttatcat cattgattca gggtaaatta actttgaggt gataatgatg aaacaacaag
     6901 cgattgaaaa aatcaatcaa gtaatcgaac agtcacgtat tggtgtactc tctactgctg
     6961 tcaataataa accgaatagc cgttatatga ttttttataa cgatgactta gatttatata
     7021 caaaaacgag ccgttctaca cgcaagtttg aagaactgac acaaaaccca gatgcccatg
     7081 tattattagg ttatgaagaa ggttcaggtc agccttatgt cgaaattgaa ggtcgagtcg
     7141 atatcattac caactcgaaa gaaatcgatt ggttgtggca agaacaagat cacacatttt
     7201 tcgactctaa aaatgaccct gatttagtgg tattacgtat tattccatca catatcacat
     7261 tattgaatag tgatgaaaca gcaaccccat ttgaaattga tgtgagccaa ctgtaactaa
     7321 aaaaggccgt atttaaatga ttcaacgctt acaagaagtc atgttaaacg tgcaagacca
     7381 aaaaagccaa acaattttgg acatcgcatt ttgatttcta agtcgcatct gatgatacaa
     7441 ttcaaggtat gcgtgtcatt actttaaaac caacagacac agcacaaacc gccatcgtcc
     7501 tccaagccaa aaaaagttga agcgatgggt ttcggcgtca atacagggac accttccctc
     7561 atattcggga caaccaatat ctatcgttgt atgatgactt aaaatcaaaa ggcattcaag
     7621 tcggcgaaag aatgacttta ccaacaggca ccgtgtttaa ctttgctgat gatgaaaaca
     7681 actatttcgc agtccgccaa actgaacaat cgtaaaaaac aaacactatt cctcaacagc
     7741 gtgttttcaa tacttagcgc tatggagaat agtgtttttt atatttaatt acaaattgcg
     7801 cttgaccttc acgttacgtc aagcattaca ctgatattat tccaaagaga aagggggttc
     7861 aatatgtata ccattaaggt tgtatccgaa ttgacaggat tatctacacg cactttacgc
     7921 tattacgacc aaatcggact tctaaatccg agcaactcga gtgaagcagg ttatcgtcta
     7981 tacaatgaga aagatattgc gcaattacaa caaattatga tttataaaaa tatgcaattg
     8041 ccacttggac aaattaaagc tgttttagag gaagatacgc ttattgagga cacacttaac
     8101 aggcatttgc actatttaga acaacaacag cagcagattg ccaaacaaat caaactcatc
     8161 gaaaaacaac ttggagggat cgaaatgaca caagaagaaa aattcagtca gttaaaagca
     8221 gatgcactct cagaaattaa cgcaaaatat ggtgaagaac ttgcacaaaa atacacatca
     8281 acacaagtta aagcgcaaca tgaacatttt aaaaatttaa cacaagacga ataccaatca
     8341 gcagaatcag ccgaagcaac actattttta ttgttaaaaa cgattgagga acaagcattg
     8401 cctatcgcgc atccaactgc agaacaagcc tttcttgcac atcaaaattg gctcaagcac
     8461 atggttccta actattcgac agactatcat cagcaactcg cagaccttta tattcaagac
     8521 tctcggttca gtgcctatta caaacaatat gctggcgaac aagcgcctta tattctaaac
     8581 aaactcatca agcattatac gtaaacataa aaaaatagac gtcaccttgg tactttccaa
     8641 ttgacgtcta tcattactaa cctttgcaat ccatttaaaa cgcatttcta ccaaatcaat
     8701 gactttttca acaatcacct atcctacaaa ccaaaaataa gactttgata tacattaagg
     8761 tttcatttat aaaatatcca gccagactta acgcgaaagt gatttgtacg tcattaacac
     8821 acacatttga gacttgaggt tcaaacacag attgcaaaaa aacgtgcaag actcctgatg
     8881 gaatgagtta aaggcaaatt aatgtcattt aactttaaaa gtggctaacg tttaacgcag
     8941 tagctgtctg acttctcaat gcgcatgctt ttgagtagcc tagtcagcct tgcgggggca
     9001 gtacgacgaa atctttgttg cacatgagat ttctgtgctg ctcccaaaat ccacaaccgc
     9061 tacctctaca aatgtaacag ctaagtcaaa gcgttggtta gttgtagcga ggcccctagg
     9121 aacgcgagcc caaagcgtgc aatcattatg taatcaccta tcttacaaac caaaaatgag
     9181 attttgaagt tcactaaggt attattcatg aaatgttcag taagtcttaa cgtgaatgtg
     9241 atttgtacat cattaacatg cacacatttg ctttttgagg ttcaaacaca gattgcaaga
     9301 acctgtgctc gctttcaaca gacaaataaa aatggattgt taagccgggc gagactcctg
     9361 aggcatccag ccgaagcgga aaatccacca acgcttcaac tctgtcccct tccaatgaaa
     9421 gcgttggtta gttgtagcga ggtgcctagg aacgcgagtc caaagcgtgc aatccatttt
     9481 aaattaaaat caatcaaagg ggcataggtt cagcaatctg aagcttgaac acttcccctc
     9541 gtgaatgtct caatatgttc cctaaacgat acaaatcact cacctttaag ctgcaactga
     9601 tacattttat aataaatgcc gccttttgca atcaaagcat catgcgtacc acgctcgaca
     9661 atctcacctt gattcaacac taaaatctca tctgcatctt gaatggtcga taatcgatgg
     9721 gcaatcgcaa tagttgtccg tccagcacgc attcgattca atgactgttg aatcgcttct
     9781 tcggtctcag aatcaatatt cgctgttgct tcatccaaga ttaaaatttt cgggttaatt
     9841 gccatcgtac gcgcaaatgc aatcaattga cgttgaccac ttgaaaatgc actgcccttt
     9901 tcaatcactt tatgattata gccaccatcc aactgctcaa taaacgaatg tgcatgtaca
     9961 aattccgctg ctgcttccac ttctgtttca gtcattgtcg gatgatacaa cttaatgtta
    10021 gaagcaactg tgccataaaa cataaacgga tcttgtaaca cgagacccat attacgcttt
    10081 aaatgttcat gtggaaaggt cttaatcgac tgaccatcaa tgaaaatgtt acctcgatta
    10141 aactcataaa aacgcataaa caagttgatg atcgaacttt tccccgagcc tgtatgaccg
    10201 accaatgcaa ctgtttgacc cggctcaact gtaaacgaaa tatgctttaa cacatcatgc
    10261 tcaccgtcat aactaaagga cacgtcatca aacacgatac gtccttctgt gatttcactg
    10321 tgaccttgtg gattctgtaa tggggcgtgt gttggattat ccatcatttt aaatacacga
    10381 ctggccgaga caattgcttg ttggaaaata tttaagtttt gactcacttg gttaacgggt
    10441 tcaaaaaaac gctgcatgta ttgaataaag gcatatacga cccctgctgt caccgtagtc
    10501 gaaaaactta aaataccgaa atacgccaaa atgatcacgg ttgaaaatgt tgacaacatc
    10561 gtaatggctg gacgtaatag catcccatct aagcgaatcg ttttcatgga gtattcataa
    10621 tgagatgtgt taatcgtttc aaattcgtca cgtaagcgcg cctcttgatt gaacacttga
    10681 atgattttca taccttcaat ggattcaccg agtttcgcat ttaaatctga taagcgacgt
    10741 ctcgtttcat aaaagtaaac cgatgcatac ttacgataaa cagcgagaac gataaagact
    10801 aatggtgtaa acaatatcgc gaaaaatgcc atgcggacgt ctagtacgaa catcatcgta
    10861 aaacttgcca aaatcatgaa aaaggcaatt aaaaatgatg ataagacacc tgtgaacatt
    10921 tcaacaatcg cttctgtatc attcgtcaat cgtgatacta tactcccact tggtgtcgca
    10981 tcaaaaaact tcatacctaa acgactgatc cgtttaaatg catcaattct tagttgttga
    11041 atgactttga atgctaaata ttgtaaataa taaatactta aataggtcgt cacagcgccg
    11101 atcagttgga tgccgacgaa cacaattaat agcatcacga tatcattacc tgggaaatat
    11161 ctcggcgtta aatattggtc gatgaagatt ttaaccaaat atgggaccga catactcgca
    11221 gcagtcgata atgtcagcat cgtcatcgtt aaaaagatca gctttttaaa cggaaatgta
    11281 tatcggagga gtcgatataa cgttcgtgtt tgttctttcg tcgtcaattg gggattactt
    11341 tcttgttgtt tcattcatgt cacctccatt gacttcgctt tctaaatctt gtgttaaacg
    11401 gctttgcatt gcttgagatt ggaatgtttc agcataccaa ccgtgctgct gcagtaattc
    11461 atcatgtgta ccccgttcga taatcgtccc gtcacgcata acgataatca gatccgcatg
    11521 catgaccgca ctcattcgat gggcagtaat gatgttggtt ttaccttgtc gctctttttt
    11581 caagttacct aaaatggcag tttcagtttc ggcgtccacg gctgacaatg catcatctaa
    11641 aatcaacact tgtggatggg tcaataatgc acgggcaata gaaatccgct gtttctgtcc
    11701 acctgataat gagacgccac gttcaccgac aactgtgtca taggctagtg gtaacgttaa
    11761 aatatcttgg tgaatatgac tcatcgcgct ggcatgatgg accgcttcat catcaatatc
    11821 gggttgacta aacgcaatgt tccctcgaat cgttgaagaa aataaaaagt gttcttgcgg
    11881 gacataaccg aactgtgccc gcaactttcg aatatcatag tcacgtagcg gatgatggcc
    11941 atattgaata tcttcaggtc gctcagtatc aaattcacgt aataatagtc gaataagtaa
    12001 acttttacct gctcctgtat gaccgacaat tcccactgtc atcccttgtt gaatcgtaaa
    12061 gttgatatca tgcaaactgg catgtgctgt atcttcaaac tgaaattgct ttaaattaaa
    12121 attaatatcg ccagtcggtg cgtcactatt ttggtatgtc gttacaatac cacttggcac
    12181 actttcaatc tctcgtatac ggtcatatga cgccgcccct ctttgaataa tgttaaagaa
    12241 aaagcctagt gctagaagtg gccatacaag catacctaag taagtagtga atgtaatcaa
    12301 ctgtccaatc gtaatcgaac cgtcaattac catataggcg ccaaatacaa cactcagtag
    12361 ataactcgcg ccaatgacca gctcaatcgt cgggtcaaac agtgcatcga ttttcgaaac
    12421 gactaagttt ttcgctacaa cacggtcact caattggcga aagtcatctt catctgctgt
    12481 ttcatagcca aatgatttgg tcactttcac acccgcaata ctttcttgcg ttttatcatt
    12541 caactcacta aacgcccctt gtgcttcttt aaaaccttta tgcaacaaac gaccataata
    12601 actcgttgaa atcactaaaa tcggcagtgg aatcatcgcg atgagcgtta actttggact
    12661 aattgtcaca aacatcatca ataacgtcat tccacctgta atcattgcct ctgaaatggt
    12721 catcacacca atgccggctg tgttttgtac agcacgaata tcattagtcg catgcgccat
    12781 caaatctcct gttcgatatt tttgataaaa cgatgggctc atttgtgtat atttctcgta
    12841 caattgttct cttaaaatac gtcctaattt agcactggct ccgaaaaagc gggtgcgtaa
    12901 aaagtaacgt aatccataga cgagtatacc tactgagaaa ataatcaaga ggtatatcgt
    12961 caagttttgc ggcgttaatg tttttgccgt aatatggtcg attacaaaac ctataatttg
    13021 cggtgggatc aaactcgata atgccgctac gaacaacgcc atcaatgctg ttatataacg
    13081 ccatttctct cgtttcaaaa accaccctaa ttgtttaaaa actttcatgc tgtcacctgc
    13141 tttcggttgt tccgagtcaa tacttatcct ttactatcac agtcttttaa aataccattc
    13201 atttcactca tatggcaatt ttgctgtttg taaaaatggg ataggatatc aaaacttttg
    13261 atgccccata tccacttttt tcgttacgat gcacgtatgc cacatgcttc tgcgactact
    13321 tcaacgatat gtttcactgc aacacgttga cctaaacctt ctcgttccac gcctaacttc
    13381 atctgtaaat gacaacctgg attagacgta ataatcaact ctggtcgtgc tagtttcacg
    13441 ttgctcattt tgtgatctaa aatttgcatc gatgcatcat aatgcacaag gttataaatc
    13501 cctgctgaac cacagcacat ttgttgggat ggcatctcta ctagcgtaag cccaggtaca
    13561 cgtttcaata cattttcagg cgcttcgaat actttttgaa cattttctag gtggcatgac
    13621 ggttgatata ccgcacgata cgccacttca tgtgtcattt ccaactcaat ttgtgccatt
    13681 atttcagaaa tatcgcgaac ttttgcgaca aactgttcag cacgctgacg ccaaattgtc
    13741 cctttctcaa acaacaagtg gtattctttt aatgctgcgc cacaaccccc aatcgtattc
    13801 acaatataat caaaatcata ctgctcatac gcaacaatat tctcttttgc gagtacaatt
    13861 gtatgcgccg tctcccctgc atgatgttga agcgcaccac agcacgtttg ttgcggcaca
    13921 ttcgtcacat ggacatcgtg ttggcgcata atctgcatcg caagtgtatt cacttcactg
    13981 aaaaatgcat ccatcataca gccttgaaaa aagcctactt tcatttgatg tggacgtgct
    14041 ccatgaccgc tttcctcaat aggatgactt ggacgcacag gtggtaacat tttttggagt
    14101 tgtgcatatt tcggaagtgg cttcaaaatt tttgtggctg tgaccgcttt ttcgatacct
    14161 gtctgttgat aaaaatagag ccctttgttc actagacgta atgctttctt actttttaat
    14221 acaccttcaa acgccactgt tcgaatcact ttctcgacag gtgattgcgg gcgttcttcg
    14281 cggagcactt caacagctga acttaaaata tctccgtagc gcacatgtgt cggacaaatc
    14341 gtttcgcacg cacggcaacc taaacataaa tcaatgccag atgccatatc ggccaatgta
    14401 attttatctt ctgctgccat tttcaccaaa ttaatacgac cccgtggcga atgtttttca
    14461 ctcttgaatg gcacatacgt tgggcaaact ggcaaacaat acccacattg tacacagtca
    14521 aatgtcgctt catagtctaa acgttccttt aagttagtcg tcatggctta acaccaacct
    14581 tgtttcacct gttgccggga aaatctttcc agggtttagg cgatgatctg gatctaacgc
    14641 atctttaatc gctttttgaa atgccaaact tgctgggtca aattcacgcg tcataaatgg
    14701 ctttttcatc gtaccaatgc catgctcccc cgaaagcgtt cctcccagtt caattgcata
    14761 attaaaaatc tcctcaaccg cacgttccac attttttacc gcttcaggat cacgcatatt
    14821 cgcactaatc gtcggatgca aatttccatc tcccgcatgg ccaaatacaa ccaaattcaa
    14881 atcatacttt tgtttaattt catcaacttt ctcaaacatg tgcggaattt tactcagtgg
    14941 taccgtcgca tcttccgaaa ttttcgtaaa accacgttcc acaacggctg gtgacaccgc
    15001 tttacgcact tgccataact cggcttcttc tgctttggac ccagcaattt taacttgcgt
    15061 cacacccatt ttggcgagcg cggctttaat ggtttcaagt tctttcggta atatcgcttc
    15121 atcaccgtct acttcaacta acagtaatgc cgcagcatct ctaggcaaat caatgcccgc
    15181 ataatccaca actttgttta tcgcatggtg atcgagtatt tccatttttg acggtcgtac
    15241 ccctgaagtt aatatttgtg aaatcgaacg tcctgctgaa ccgagatctt caaaaacaat
    15301 caatgcggtt tgcgtggctg gcggtttcgg aattagacgt aacgtcgctt cggtaataat
    15361 acccagtgtg ccttccgcgc cgatgagtaa ttttgttaag tcgtaacctg tcacattttt
    15421 aatcgtattg ccgcccgtcc gtatgatgtc cccttgtgct gtcacgacct ctaaaccaat
    15481 cacataatct ttcgtaacgc catatttcac gccatgaggt ccaccagcat tttcggctaa
    15541 attgcctcca atcgtacata cagaagaaga ggacggatca ggtggataca tgagctgatg
    15601 ttgttctgct agcgcatgta tatccgccgt tttcacgcct ggtctcgtct taatgattaa
    15661 atcatctggg taaatcgtca cctcatcatt ccattgtgaa aaatcaagaa caatgccccc
    15721 atttactggc aacgaaccgc ccgacaagtt cgtcccagcg cccctcggat aaatcggtaa
    15781 atcatacaca ttcgcaagtt ttacaatttg ttgcacttcg ctcgttgcta acggttgcgt
    15841 cacaaaatca ggcaaatatt gaccaaatga accgtcataa ccgtaagaca cccgctgtgc
    15901 aacatcgaca aacacacgct ctcccacaat gtcgcgcaat cgtcgttcaa tttcaagttg
    15961 acgttgttgt tgcattgaaa tcccccctat ttcatttgct tgatgtcgga atattttgat
    16021 aaagttgtca tttcttattc tatcacactt ccaaaaatgt aacatgggga tatatttcta
    16081 aataaaaata aacagtttga tacaaagtag ggagacaatc gcttaaaagc acatatgcga
    16141 catcactaaa aacgtatgtt aagctagtaa aaaagggcag aaaagaggag aattcatgtc
    16201 aaagtttgat catgtgcaac caccgaaaca ttttgcgcgc caccataaaa cattaatcgt
    16261 cacgacgcgc tatcaattta cgagtgataa ccgtatttac ttttcaaata ctgaacatgt
    16321 cgatttagaa aaccatacgt atacattaga ggtcgagata tggtctaaaa cagatgaaca
    16381 tggcatggca gtcgacttta aagatattga taaagtgtac cgcgaacatt tggaaccctt
    16441 attagatgga cagttgatta atgatacatt gccagatatg aatacgacgg tcgaaaatat
    16501 tgcacattgg atatggttac gctttaatga gtatttgcca gaaggcgtgt cactcaacac
    16561 catttcgcta tatgaaacac ctgagcaagg cattaaatta acacgtaaca ttatggcgca
    16621 gtaaagtgag tgccggattt gacacttgtg ttaaacaaat ctaagaagat gaataagact
    16681 ggcattgagt tggaatggaa actcaaatgt cagtcttatt gttattacat acgatgaatt
    16741 tgggattagc aaacgctcat tgaacttaaa tgtaatttga acattactta ctataagaca
    16801 aaagatgact aaactgaggt aaagcatttc agttcaagtc acctttgcct atgtgctaag
    16861 agagaggttt ataaagcagg aggtctttct cttttttgaa ttacttttat ctgtttactc
    16921 tttgttatta tcaatccatg tttttaatct ttgatcgata ggctgtattt tagcgctctt
    16981 ataggttgtt ctattttcat tgccatatag gatacctaaa aactggccat tttctaaaaa
    17041 cacacccgac cctgattgac caggagagga tggcattgaa gtacttaatt ccttagtgat
    17101 tgggttaaca ttagtgataa tgccttcact tctatactgc ttcgtctcac ctttatcacc
    17161 aggatatcca taactatata ttttctttcc aattaatttc ttaagtccct ctaaatcata
    17221 agcaacaata cctgttttaa agcctttaat ataatactta taagcactac ttttatctgt
    17281 ttcggtccct tttaaaatcg caatatcaac acccgggtct ggcttatata aacttatatt
    17341 catcattcca aaaggtgtag acgcaccgga ctgacctgga tacactgcac caatataacc
    17401 tgttttttct tgattaccag cgcaatgttt tgcagttaac cacatgttgg gtgtaatcaa
    17461 aacagcggaa caataaagca tataactcgg gtcgtatcta gcgtttaatt taccattagg
    17521 gtctttctgc gtatctacta tcgtttgtgt tccagggctt ggctgttgag cgttcgcact
    17581 acttaaggtt agtataggca ataaaaaaca taagcagagt atgattgaaa tttttctttt
    17641 catttttatt ccacctttac acttttaata tcttgtatgc actttca
//
LOCUS       DANHPA010000051        17674 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.051, whole genome shotgun sequence.
ACCESSION   DANHPA010000051 DANHPA010000000
VERSION     DANHPA010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 17674)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17674)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17674
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.051"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..237
                     /locus_tag="PTC28_001365"
     CDS             <1..237
                     /locus_tag="PTC28_001365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716653.1"
                     /translation="APNAHKYNKNIIINKGKFAVWRSLDFSKKADLKNIKFGKEYTAK
                     YEYYHPNGQKYFSLYDNKNKWMGYINTRSVTVKK"
     gene            258..986
                     /locus_tag="PTC28_001366"
     CDS             258..986
                     /locus_tag="PTC28_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HDK5716654.1"
                     /translation="MLKKLVVTGLIATAATQVYAHDTQAAEKGATDAPNVMVKDEAKK
                     EVTPIIHKPTCIYPHLEGEDDAAYLKRMATNPPEGAVPYGVLNKDGSITEPNTNPHFD
                     VLKIEDPNAMKDLVDTPADDQDTVPSDLQIEPPALIGPATKHTDGTGDAKSNDDHKVT
                     KSSGASAQDMKKKDVTTQTAQPKADKKMATAKVAPAKQQDKAAKMLPAAGESQVNAIS
                     QTALALSMIALGVIAFFTRRRKTN"
     gene            complement(1036..2244)
                     /locus_tag="PTC28_001367"
     CDS             complement(1036..2244)
                     /locus_tag="PTC28_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HDK5716655.1"
                     /translation="MVSSRQLTQKSFLRRLDWPLIALIIILCIISVTTIHSAMGGGQY
                     SLDFGVRQIFYYILGAIIAFMIMLFSPKKIRNYTYTVYIIFNILLFGLILLPESSITP
                     VINGAKSWYRFGPISIQPSEFMKIVLILVISKVVAQHNRFTFNKSFQTDVMLLLKIAG
                     VSFVPIALILLQNDLGTTLVFLAIIAGIVIVSGVTWKILAPLFGSAIVLGGSLILSII
                     YKPSLIENVAGIKTYQLGRINSWLDPYAYSSGDGFHLTESLKAIGSGQLIGKGLNNGE
                     VYIPENHTDFIFSVIGEEFGFLGSVILLGVFLLLLLHLIRMAMNSDDLFNKSFIIGFI
                     SLLLFHIFQNIGMTIQLLPITGIPLPFISYGGSSLWSLMSGVGVLLSIHYHTPKKYND
                     EATTQKRTTS"
     gene            2398..3468
                     /locus_tag="PTC28_001368"
     CDS             2398..3468
                     /locus_tag="PTC28_001368"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HDK5716656.1"
                     /translation="MSKEALCIIYGGKSAEHDVSILTAQNVLNAIDKARYHIDIIYIT
                     NDGQWKKMDNITEDITDVEALRIDDVPTSDISAMLTQSSQGGRYDAVFPLLHGPNGED
                     GTIQGLFEVLDIPYVGNGVLAASSSMDKLVMKQLFAHRGLPQLPYVSFLRSEYEKYRK
                     NIIKLVHDKLAFPVFVKPANLGSSVGISKCEDEAALIKGIEEAFQFDRKLVIEQGVDA
                     REIEVAVLGNDYPETTWPGEVVKDVVFYDYKSKYKDGKVKLAIPADLDQDVQMTLRNM
                     AVEAFKATDCSGLLRADFFVTADNQIYINETNAMPGFTAYSMYPKLWENMGVSYSELI
                     TKLIDLAKARYEDKQKNKHRID"
     gene            3480..4844
                     /locus_tag="PTC28_001369"
     CDS             3480..4844
                     /locus_tag="PTC28_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HDK5716657.1"
                     /translation="MINITLKQLAEWIDCDIDAQYLDVEIKGVTIDSRHIQHGQLFIP
                     FKGENVDGHQYSEQALNDGAGATFFQRDSTLTAPTNGPVVFVENTLTALQQLAKAYLQ
                     HVAPTVIAVTGSNGKTTTKDMLENVLSGKFRVQKTQGNYNNEIGMPLTILELNEDTEV
                     SILEMGMSGFHEIELLSNIAQPDFAVITNIGESHMQDLGSREGIAKAKFEIVSGLKSE
                     GYFIYDGDEPLLKPHVETLTSAHQVSVGLSAKNDMQCQMVSHLEEGITFTVNDDVTYT
                     IPILGEHNMRNATIAIAVGRIMGLTDEQIQQQLTSLKLTDMRMQKFMAPNGAMVINDA
                     YNASPTSMKAAIDTLSHMKGETILVLGDVLELGEQSRQLHESVGAYLENKGIHQLYTF
                     GEGAMTIHEKGKAYVNEAIHFDQKDKLMRYLTSIVEQHSVVLVKASRGMHLEEVVEAL
                     VEAK"
     gene            5125..6612
                     /locus_tag="PTC28_001370"
     CDS             5125..6612
                     /locus_tag="PTC28_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017174792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDK5716658.1"
                     /translation="MQKFTELGVSERTAETLEAMGFTEPTPIQKDSIPFALENIDILG
                     QAQTGTGKTGAFGIPLIEKVVGKEGVRALILAPTRELAMQVAEQLREFSRGQKVQVVT
                     VFGGMPIDRQIKSLKRGPQIVVGTPGRVIDHLNRRTLKPQQIETLILDEADEMMNMGF
                     IDDMRYIMDKLPSENRQTMLFSATMPKAIQELVQKFMKSPRIIKTMNNEISDPQIDEY
                     YTIVKELEKFDTFTNFLDVHQPELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQ
                     AKRLEVLKKFKNDQIDILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRA
                     GKHGIAVTFVNPIEMDYIRQIEQTNRRQMRALRPPHRKEVLKAREDEIKSKVQSWMDA
                     AKEPRVENIAKQLLETYDQTELVTALLQELVESNDEVDVQLTFEKPLARKNGRSPKGN
                     RKGGNNKRHSKAGRNHKPSGNKKGNFKHKRETKVKKGRTFADHQK"
     gene            6852..7325
                     /locus_tag="PTC28_001371"
     CDS             6852..7325
                     /locus_tag="PTC28_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HDK5716659.1"
                     /translation="MQLEFTQSPERARRYLKLWYFCQFIVTLIILSAAVTVWFYNDMP
                     FYGTYIFIGLVLIDILYYLIHPILLYRYYHYRVTDSYIEIQKNWWFKRNEVIQIERIQ
                     YVRRKAGPLMRRFQLNRLSFYTAGHELVLPLLYDDTITEIESFCLTQLKGGDSDV"
     gene            7318..8847
                     /locus_tag="PTC28_001372"
     CDS             7318..8847
                     /locus_tag="PTC28_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HDK5716660.1"
                     /translation="MYSPQRLHPISYVLSIIEAVKSNFLFVIIFVLFQLDSFDFTDWT
                     NYKWPSFIALSFTLVFINRTIEIYRTRYWIEGDYFIVKSGLFNLKQKELNIRRIQSMD
                     TVQPIVHQLVGGVKLTIKTPSDGIDLNMVTKRQSQWIQEEIEKAKSRIESEDGRQMQS
                     EHSSIATDEHYEAPPIIKTNAPTEMIYQLSTQNLLLMAMTSGAVFVTLATVGPIVTAF
                     EDIIPWEGIFGQVESWIKNLVALVITLVIGILVIAYIIGVIITMVRYYRFTLTRSGDF
                     LKIRYGLLKVTNLSLPIAKLQAVQEKKSFFRHLFGFTSYHFIITSDMEVDIEDDFASG
                     EIMVLPFIKQREGTKILASLLPIYSFQPVETGLPWQGFHRRFWIPSVILIGIGALIHY
                     YWWVWIWIPIAVIILYLIIHSVIATRMSGSGLTDEEVSIRKVTWFGFKTTTFKKDKIL
                     GFQQTAHPLMQQKQLVHFDFTIASGSVSKDFGLRFEHQSKVTRNKQWYLGGGDINGKD
                     E"
     gene            8831..9349
                     /locus_tag="PTC28_001373"
     CDS             8831..9349
                     /locus_tag="PTC28_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HDK5716661.1"
                     /translation="MEKMSESGLKVMRIAALIMSAIIALLFIGAIVLGYFLAWDRFVI
                     ALIIILAIVLLLQLIIDVWLKPIYKYRTFGYTYDSHIVTVRKGFIMIKQTRIPTFRIQ
                     NVDFKEGWLMRKYQLATLTLSTAGGNVDVTLIDKATAQKVMAFIKNKDAKVPISEAKP
                     IVEQDEKEEGPL"
     gene            9346..9696
                     /locus_tag="PTC28_001374"
     CDS             9346..9696
                     /locus_tag="PTC28_001374"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HDK5716662.1"
                     /translation="MIYGVGLDLVEIARIMDTVQRQPRFPERILSEQELERYHNYTTE
                     RRRIEFLAGRFAVKEAFSKALGTGIGKKITFKQIHCENDARGKPTIQMAGYHVHVSIT
                     HTEHYAAAQVILEQ"
     gene            9730..10878
                     /gene="alr"
                     /locus_tag="PTC28_001375"
     CDS             9730..10878
                     /gene="alr"
                     /locus_tag="PTC28_001375"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002457107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HDK5716663.1"
                     /translation="MSEKYYRTTTMKVNLDAITENYYALTKLQPNKTMMPVVKANAYG
                     LGSIQIAQHLSQLGAEFFCVATLDEAIELRMHGIKEKILILSSIPPDAINKAIQHRVA
                     VTVPSRAWLEAATAEIDEDNEKTLWLHIKVDTGMNRLGVKDIEAYHDIINFIHAHENL
                     VFEGAFSHFHSADEDNDSAHLQYERFEEIIESTEHPTYIHMQNSAGTLRFNPSLCNAF
                     RPGIALYGYYPSAFIEKIATAQLAPAVQLVTEVMEVKSLIKGETVGYGQTYTAPEDMT
                     IALLPIGYADGYLRSMQGANVRIGTTECEIVGRVSMDRTAIRVPATVQMGEEVILIDD
                     QAHTSQSVESLAAQQQTINYEVLCNIGRRVPRVYFVQEMVEISNELLK"
     gene            10963..11133
                     /locus_tag="PTC28_001376"
     CDS             10963..11133
                     /locus_tag="PTC28_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin MazE"
                     /protein_id="HDK5716664.1"
                     /translation="MSAFNQTRFKNLEQSLKEGYVQMADLNLSLATEAYPVECEACDC
                     NESHLTTDYKED"
     gene            11134..11487
                     /locus_tag="PTC28_001377"
     CDS             11134..11487
                     /locus_tag="PTC28_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HDK5716665.1"
                     /translation="MKRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAA
                     ITGRINKAKIPTHVEIEKNKYKLDKDSVILLEQIRTVDKKRLKEKLTFLSEKKMKEVN
                     NAIGISLGLHMNHHK"
     gene            11545..12549
                     /locus_tag="PTC28_001378"
     CDS             11545..12549
                     /locus_tag="PTC28_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family protein-serine/threonine
                     phosphatase"
                     /protein_id="HDK5716666.1"
                     /translation="MTNQNESRYFQLVDQFLQSESKASVLNQAHSFSENLSDDALLPE
                     EFVDIHRKYVQKYELSREDMIAILDILRAVIGSFGYDYEDYKALVDRVEVHDKELDVA
                     SRLQQTMLKTNIPQFDGIQIGVISVAAQHVSGDYFNLIDHKDGTMSFAVADVIGKGIP
                     AALAMSMIKFGMDSYGHSQLPNDGLKRLNRVVEKNINQNMFVTMFYGLYEEINHVLYC
                     SSAGHEPGYIFRAESDTFEEIKVRGRVLGVSPHVRYQQQEIAINIDDMIIVFTDGVTE
                     IRKENGEFIDTRYLLNFILAYKQLHPQDIVQLLYEELLRLQKKGKRDDLTILIIKRVH
                     "
     gene            12628..12954
                     /locus_tag="PTC28_001379"
     CDS             12628..12954
                     /locus_tag="PTC28_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019468012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor antagonist"
                     /protein_id="HDK5716667.1"
                     /translation="MNLNIETEKHETHYDVAVAGELDVATVPELEKVLVPIRQAGTHD
                     IYVNLEKLNYMDSTGLGLFVGTLKALNQHEKELYILGVNDRIKRLFEITGLNDLMHVN
                     EGTEVE"
     gene            12954..13433
                     /gene="rsbW"
                     /locus_tag="PTC28_001380"
     CDS             12954..13433
                     /gene="rsbW"
                     /locus_tag="PTC28_001380"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002448683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma B factor RsbW"
                     /protein_id="HDK5716668.1"
                     /translation="MMQSNDIIEMRLPASAEYVSLIRLTLSGVFTRAGAHYDDIEDAK
                     IAVSEAVTNAVKHAYKDKEERGYIHVCFELASDRIKIVVSDQGDSFNYQETKQKLGPY
                     QENESIDFLREGGLGLFLIESLMDEVTVDKDTGVTISMIKYIKKEQVRNNDERVEIS"
     gene            13408..14178
                     /gene="sigB"
                     /locus_tag="PTC28_001381"
     CDS             13408..14178
                     /gene="sigB"
                     /locus_tag="PTC28_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor SigB"
                     /protein_id="HDK5716669.1"
                     /translation="MTKESKSASAVSPEQINQWIQAYQNDEDHEAQEKLVKHYEKLIE
                     SLAYKYSKGQSHHEDLVQVGMVGLIGAINRFDLSFDRKFEAFLVPTVIGEIKRYLRDK
                     TWSVHVPRRIKEIGPRIKKVSDELTNELGRSPSISEIAERLEVSDEDVLEAMEMGQSY
                     NALSVDHSIEADKDGSTVTLLDIMGQHDDNYELTEKRMILERILPILTDREREIIQCT
                     FIDGLSQKETGERIGLSQMHVSRLQRTAIKKLQEAARK"
     gene            14458..16608
                     /locus_tag="PTC28_001382"
     CDS             14458..16608
                     /locus_tag="PTC28_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002505949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HDK5716670.1"
                     /translation="MTNHFVQAIHNQYQYPVKHIEAVLKLLEEKNTVPFIARYRKEVT
                     GGLDEVEIKQIADEYHYMEQLQKRKDEVIHSIEQQGLLTDELRRDIQQQTKLQRVEDL
                     YRPYKQKKKTRATEAKRKGIEPLAEWIYRQKLDADLGEKAQAFLTDEVTSVEEAIQGA
                     QDIIAEKIADHPQYRKQILKLTQKEGLMTAQKKKKAEDEKAVFEMYYDYQEPLRQVAN
                     HRILAMNRGENEKILQVKIEMDKAILAQNIKKQEVKGHNELSTIVGEAIDDAMKRLIF
                     PSIEREIRTDLTERAEAQAITLFSENLKNLLLQPPLKGKQILGVDPAFRTGCKLAVIN
                     PYGTFIEKSVMYPHPPVSKVAEAEKVFLKMVKDFDINLIAIGNGTASRETEQFVARMI
                     QDHALDVQYIIVNEAGASVYSASEIARTEFPDFQVEERSAVSIGRRVQDPLSELVKID
                     PKSIGVGQYQHDVNQKALDAALDFVVETAVNQVGVDVNTASSTLLQHVSGLSRQIADN
                     IVLYREENGAITHHRQLNKVKRLGAKTFEQSIGFLRIVNGKEPLDNTAIHPESYDATY
                     QLLESLELKITDIGTSELAKVLSTLNIASYATKLNIGVPTLEDIVKSLIAPNRDPRDD
                     YETPELKSDVLSIEDLSKGMKLNGTVRNVVDFGAFVDIGIKQDGLVHISKLAKKFIKH
                     PMDIVSVGDIVEVWIENIDENKGKVALTMIDPNE"
     gene            16601..17053
                     /locus_tag="PTC28_001383"
     CDS             16601..17053
                     /locus_tag="PTC28_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family protein"
                     /protein_id="HDK5716671.1"
                     /translation="MNNESLQQLTEQLAMEHFGLPFKHRIYFNRRLRTTGGRYMLSSH
                     DIEINPKQYEHFGEQALVDIIKHELCHYFLHLSGRGHQHKDRDFKVLAEKVGAPRFCQ
                     PTESYTSRANYEYECQRCHSSYVRIRKVNVVKMRCGRCGGHLKLKRYL"
     gene            17408..17490
                     /locus_tag="PTC28_001384"
     tRNA            17408..17490
                     /locus_tag="PTC28_001384"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:17441..17443,aa:Leu,seq:gag)
     gene            17515..17588
                     /locus_tag="PTC28_001385"
     tRNA            17515..17588
                     /locus_tag="PTC28_001385"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:17547..17549,aa:Gly,seq:tcc)
BASE COUNT         6019 a         2900 c         3788 g         4967 t
ORIGIN      
        1 gctccaaatg cacacaaata caataagaat atcatcataa ataaagggaa gtttgctgtt
       61 tggagaagtt tagactttag taaaaaagca gatttgaaaa acattaagtt tggtaaggaa
      121 tacactgcaa agtatgaata ttatcaccca aatggtcaga agtatttttc gctatatgat
      181 aataaaaata agtggatggg ttatattaat acgcgctcag ttacagtgaa aaaataattt
      241 taaagggatg aactcacatg ttaaaaaaat tagttgttac aggtttgatt gctacagcgg
      301 cgacacaagt ttatgcgcat gacacgcaag cggcggaaaa gggtgctaca gatgctccga
      361 atgtgatggt taaggatgag gcgaaaaaag aagtgacacc gataatccat aaaccgactt
      421 gcatttaccc gcatctagaa ggcgaagatg atgctgcgta tttaaaacgt atggcaacga
      481 atccaccaga aggcgcagtg ccgtacggtg tattgaataa agatggatcg attacagaac
      541 cgaatacaaa tccacatttt gatgttttaa aaattgaaga tccaaatgcg atgaaagatt
      601 tggttgatac accggcagat gatcaagata cggtaccgag tgatttacaa attgaaccac
      661 cagcattaat aggaccagct actaaacata cggatggtac gggagacgca aaatctaatg
      721 atgaccacaa agtaacaaaa tcttcgggag cgtcagccca agatatgaag aaaaaagacg
      781 tgacaacaca aactgcacaa ccaaaagcag ataaaaagat ggcgactgca aaagtagcac
      841 cagcgaaaca acaagataaa gcagccaaaa tgttaccagc agcaggggaa tcacaagtga
      901 atgcaatcag tcaaacagca cttgcacttt caatgatcgc attaggtgtc atcgcgttct
      961 ttacacgacg acgcaaaaca aattaataat taaaaagagg ttggagaaac attttgttcc
     1021 tcagcctctt tctttttatg atgttgtacg tttttgtgta gttgcttcat cgttatactt
     1081 tttcggtgta tgataatgaa tgctcaacaa cacaccgacg cctgacatga gactccagag
     1141 cgaactccca ccgtaactta taaagggtaa tggaatccct gtaatcggta aaagttgaat
     1201 cgtcatgcca atgttttgaa aaatatggaa caacaataaa ctaataaaac cgataataaa
     1261 cgatttgttg aacagatcat cggaattcat tgccatacga attaagtgaa ggagtaataa
     1321 taaaaagaca cctaataaga tgactgagcc taaaaagccg aattcttctc caataactga
     1381 aaaaataaag tctgtatgat tttcaggaat ataaacttcg ccgttattta atccttttcc
     1441 gatgagctga ccagaaccaa tagcttttaa cgactctgtt aaatggaatc catcgccaga
     1501 actgtatgcg tacggatcga gccaagagtt gatacgtcct aattgatacg ttttaatacc
     1561 ggctacattt tcaatcaagc tcggtttata aataatagac aagattaagc tgccacctag
     1621 aacgattgcg ctaccaaata aaggggctaa aattttccat gtgacaccac ttacaatcac
     1681 gatacctgca ataatcgcta aaaagacgag tgttgttcct aagtcatttt gtaataaaat
     1741 taatgcaatt ggaacgaagc tcacacctgc aattttcagt aataacatga cgtctgtttg
     1801 aaatgattta ttgaaggtga aacgattatg ttgtgcgaca acctttgaaa tgacaagaat
     1861 gagtacaatt ttcatgaatt ctgaaggttg aatactgatt ggaccgaaac gataccaact
     1921 ttttgccccg ttaatcacag gtgtaatgga agattctggt aggagtatta atccaaatag
     1981 taaaatatta aaaataatgt ataccgtata agtgtaattg cgaatctttt taggtgaaaa
     2041 cagcataatc atgaacgcaa tgattgcacc tagtatgtaa taaaaaatct gtctgacacc
     2101 gaaatcaagg ctatattgac cgccacccat tgccgaatgg atcgtcgtaa cactaatgat
     2161 acaaaggatt ataatcagtg cgatgagtgg ccaatctaag cggcgcaaaa acgacttctg
     2221 cgttagttga cgagaggata ccatgccaat ctcctttaca cataaattct atattgtcat
     2281 tatataccga ttttacataa gttgtaatca aattgctaat attctcggaa aataaatgca
     2341 atacaaataa gagtcgtggt aatatggagg ttagataaaa attatggagg cggagttatg
     2401 tcgaaagaag cattatgtat catttatggt ggtaaaagtg ccgaacatga tgtgtcaatt
     2461 ttaaccgcac aaaatgtatt aaatgcaatt gataaagcgc gttaccacat cgatattatt
     2521 tatatcacta atgatggtca atggaaaaaa atggacaata ttaccgaaga tattactgat
     2581 gttgaagcgt tacgcattga tgacgtaccg acgagtgata tttcagcgat gttaacacaa
     2641 agtagtcaag gtggccgtta tgatgcggta ttcccattat tacatggacc taatggtgaa
     2701 gatgggacga ttcaagggct gttcgaagta ttagacattc catatgtagg taatggggtg
     2761 ttagcggcat caagttcaat ggataaatta gtgatgaaac aattatttgc acatcgcggt
     2821 ttaccacaat taccatatgt gagcttttta agaagtgaat acgaaaaata tcgcaaaaat
     2881 attattaaac tcgtgcatga caagttagca ttcccagtgt tcgttaaacc ggcaaattta
     2941 ggttcaagtg tcgggattag taaatgtgaa gatgaagctg ccttgattaa agggattgaa
     3001 gaagcgtttc agttcgaccg taaacttgtc attgaacaag gggtggatgc gcgtgaaatc
     3061 gaagtggcag tgttaggcaa tgactaccct gaaacgacat ggcctggtga agttgtgaaa
     3121 gatgtcgtat tttacgacta taaatcaaaa tataaagatg gcaaagtgaa gctcgcaatt
     3181 ccagctgacc ttgatcaaga cgtacaaatg acgctccgta acatggctgt ggaagcattt
     3241 aaagcgacgg actgttctgg attgttacgt gcagactttt tcgtgacagc agacaaccaa
     3301 atctacatta atgaaacgaa tgcgatgcca ggatttacag cttatagtat gtatccaaaa
     3361 ttatgggaaa atatgggtgt ttcttattca gaattgatta caaagttaat tgatcttgcg
     3421 aaggcacgtt acgaagataa gcaaaaaaat aaacaccgaa tcgattagga gttttgacta
     3481 tgataaatat aacgttgaaa caacttgcag agtggataga ctgtgatatt gatgcgcaat
     3541 acttagacgt tgaaattaag ggtgtcacaa ttgattcaag acatattcaa catgggcagt
     3601 tatttattcc ttttaaaggt gaaaatgttg acggtcatca gtacagtgaa caagcattga
     3661 acgatggggc aggtgcgacg tttttccaac gagatagtac attgacagca ccaacgaacg
     3721 gaccagtcgt ttttgtagaa aacacattga ctgcactgca acagttggca aaggcgtatt
     3781 tacaacatgt ggcgccaaca gtgattgctg tcacaggttc aaacggaaag acgacgacaa
     3841 aagatatgtt agaaaatgtc ttatctggaa agttccgtgt acaaaaaacg caaggcaatt
     3901 acaataacga aatcggcatg ccgttaacaa ttttagagtt gaacgaagat acggaagttt
     3961 caattttaga aatgggcatg tcaggttttc atgagattga gttactgtct aacattgcac
     4021 aaccggattt tgcggtgatt acgaatatcg gcgaatccca tatgcaagat ttaggatcaa
     4081 gagaagggat tgccaaagcg aagtttgaaa ttgtgtcagg tttaaaatca gaaggttatt
     4141 tcatttatga tggagacgaa ccattgttaa aaccgcatgt agagacgtta acatctgcac
     4201 atcaagtgag tgttggtttg tcagctaaga atgatatgca atgtcaaatg gtgtctcatc
     4261 ttgaagaggg cattacgttc acagtgaatg atgacgtgac ctacacgatt cctattttag
     4321 gtgaacataa tatgcgtaat gcaacgattg caattgcagt gggccgaatc atgggtttaa
     4381 cagatgaaca aattcaacag caattaacgt cgctcaagct gacagatatg cgcatgcaga
     4441 agtttatggc gccgaatggt gcgatggtca ttaatgatgc gtataatgca agcccgacga
     4501 gtatgaaggc tgcgattgat acattgagtc atatgaaagg agagaccatc ctcgtgctcg
     4561 gtgatgtact cgaattgggt gaacaatcgc gtcaattgca tgagagtgtt ggggcttacc
     4621 ttgaaaataa aggtattcat caactgtata cgttcggtga aggagcgatg accattcatg
     4681 aaaagggcaa ggcgtacgtg aatgaggcga ttcattttga tcaaaaagat aagttgatgc
     4741 gttatttgac gtctatcgtc gaacaacata gtgtcgtcct cgttaaagcg tctcgaggta
     4801 tgcatttaga agaagttgtc gaggcactcg tagaagcaaa atagcatcaa gtttggaaca
     4861 gagcgtgaat catcactgtc tttgttccat ttttaatttt aaaaaataaa atgaacgcat
     4921 taaaaatcat tattttgaga tgcgtaaacg gggcctaaac tctgtagtga tatgaattca
     4981 aagcatagag aatatataag aatttaaatg atagtgaact ttcgtttatt gcggtattgt
     5041 gacgaaaatg gtaatatgta gaagttagat taaacttatt tgacaaaata tagaagaatg
     5101 atgattcaaa aaaggagaat tactttgcaa aaatttacag aattaggcgt ttcagaacgt
     5161 acagctgaaa ccctcgaggc aatgggattt acggagccga cccctattca aaaagatagt
     5221 atcccattcg cactcgaaaa cattgatatc ctaggtcaag cgcagaccgg aacaggaaaa
     5281 acaggtgcct ttggtattcc attgatcgaa aaagttgttg gaaaagaagg cgtgcgtgct
     5341 ttaattttag cacctacacg tgaattagcg atgcaagtag ctgaacaatt acgtgaattc
     5401 agccgtggtc aaaaagtcca agtcgtgact gtatttggtg gtatgccaat cgaccgtcaa
     5461 atcaaatcat taaaacgcgg accacaaatc gtagtaggta caccaggtcg tgtgattgac
     5521 caccttaatc gccgtacatt aaaaccacaa caaatcgaaa cgttaatttt agatgaagcg
     5581 gacgaaatga tgaacatggg cttcattgac gatatgcgtt atattatgga taaattgcca
     5641 tcagaaaatc gtcaaacgat gttattctcg gcaacaatgc caaaagcgat tcaagaatta
     5701 gtacaaaaat ttatgaaatc gccacgtatc attaaaacga tgaataatga aatttctgac
     5761 ccacaaattg atgaatatta tactatcgtt aaagaacttg aaaaattcga tacctttacg
     5821 aatttcttag atgtacacca acctgagtta gcgattgtgt tcggtcgtac aaaacgccgt
     5881 gtcgatgagt taactagtgc gttactttca aaaggttaca aagctgaagg tttacacggt
     5941 gatatcacac aggcgaaacg tttggaagta ttgaaaaagt tcaaaaacga ccaaatcgat
     6001 attttagttg cgacagacgt agcggctaga ggattagaca tttcaggtgt gagtcatgtt
     6061 tataactttg atattcctca agatacagaa agttatacac accgtattgg gcgtacaggt
     6121 cgtgcaggca aacatggtat cgccgtgaca ttcgttaatc caattgaaat ggattatatc
     6181 cgtcaaatcg agcaaacgaa ccgtcgccaa atgcgcgcgt taagaccgcc acatcgtaaa
     6241 gaagttttaa aagcacgtga agatgaaatt aagagcaaag ttcaaagttg gatggacgct
     6301 gcgaaagaac cacgtgtaga aaacatcgcg aaacaacttc ttgaaacata tgatcaaact
     6361 gagcttgtaa cagcgttatt acaagaatta gtggaatcta atgatgaagt cgatgtacaa
     6421 ttaacatttg aaaaaccgtt ggcgcgtaaa aatggtcgtt caccaaaagg caatcgtaaa
     6481 ggtggcaaca acaaacgtca ttcaaaagca ggacgtaacc ataagccaag tggtaataaa
     6541 aaaggcaact tcaaacataa aagagaaaca aaagtgaaaa aaggacgcac atttgcggat
     6601 catcaaaaat aattagcgtt caaccactta aataattagc agcatagtgc atttcaatgg
     6661 agatgtacgt gctgcttttt tgatgctgtt taagggtgac gcataagttc cgagtctaaa
     6721 ttaaggtaaa tctttaacta cagcgtatcg tggctaaaat gaattttgtc taacgccacc
     6781 atatcgaact atcagaatga aaaaagttta tgatataata atcctaaatt tactagggag
     6841 tgactgtcat catgcaactt gaatttactc aaagtcccga acgtgcacgc cggtatttaa
     6901 agttatggta tttctgtcaa ttcatcgtaa ctttaatcat cttatccgct gcagtcactg
     6961 tatggtttta caatgatatg ccattttacg ggacttatat tttcatcgga ctcgtactga
     7021 ttgatatttt atattatttg attcacccaa tactccttta tcgttactat cattatcgcg
     7081 tgacggacag ttatattgaa atacaaaaga actggtggtt taaacgcaat gaagtgattc
     7141 aaatcgagcg tatccagtat gtgagacgga aagcggggcc attgatgaga cggtttcaac
     7201 tgaatcgatt gtctttttat acagctggac atgagttagt gttgccgtta ctttatgacg
     7261 acacgattac agagattgaa tcattctgtc ttacgcaact aaaagggggt gacagcgatg
     7321 tatagtcctc aaaggttgca ccctatttcg tacgttttaa gtattattga agcagtaaaa
     7381 agtaactttc tttttgttat catatttgta ttgtttcaac tcgatagctt tgattttaca
     7441 gattggacca attataaatg gccaagtttt atcgcactat cgtttactct cgtttttatt
     7501 aaccggacga ttgaaatcta tcgcacacgc tactggattg aaggcgatta ttttatcgtg
     7561 aaaagtggct tgtttaactt gaagcaaaaa gaacttaata ttcgtcgtat tcaatccatg
     7621 gacactgtac aaccgattgt gcatcaatta gtaggcggtg tgaaactcac aatcaaaaca
     7681 cctagtgacg gtattgattt aaatatggtg acgaaaaggc agagtcaatg gattcaagaa
     7741 gagatagaga aagccaaatc gagaattgaa agtgaagatg gaagacagat gcagtccgag
     7801 cattcaagta tcgctacaga cgaacactat gaagcgccac ctatcattaa aacaaatgca
     7861 cctacagaga tgatttatca attatctacc caaaatttat tattaatggc aatgacgagt
     7921 ggtgcagttt ttgttacatt agcaacagta ggtccgatag tcactgcttt tgaagatatt
     7981 atcccgtggg aaggcatttt cggtcaagtt gagagttgga ttaagaattt agtggcgtta
     8041 gtcattacat tagtaattgg gattcttgta atcgcttata ttataggcgt catcattaca
     8101 atggtgaggt attatcgatt cactttaaca cgttcaggtg actttttaaa aatccgttat
     8161 ggcttattaa aggtgacaaa cttatcgctg cccatcgcta aattacaagc ggtccaagaa
     8221 aagaaatcct tttttagaca tttgtttggc tttacgtcat atcattttat tattacaagt
     8281 gatatggaag tcgatataga ggatgatttt gcgtcaggtg aaattatggt gttgccgttc
     8341 attaaacaac gagaaggtac gaaaattttg gcatctcttc taccaattta ttcgtttcaa
     8401 ccggttgaaa ctggcctacc ttggcaaggt tttcatcgcc gtttttggat accgtcagtc
     8461 attttaatcg gtatcggtgc actcattcat tattattggt gggtgtggat atggatacca
     8521 atcgcagtca ttattttgta tttgattatt catagtgtga ttgcgacgcg tatgtcaggt
     8581 tcagggttga ctgatgaaga agtatcgatt cgaaaggtga catggtttgg ttttaaaacg
     8641 acgactttta aaaaggataa aattttaggt ttccaacaaa ctgcacaccc tttgatgcaa
     8701 cagaaacaat tagtacattt tgattttacg atcgcaagtg gttcagtttc taaagatttt
     8761 gggttgcgtt ttgaacatca gtccaaagtt acacgtaaca agcaatggta tttaggaggt
     8821 ggagatatca atggaaaaga tgagtgaaag tggccttaaa gtgatgcgta tcgctgcgtt
     8881 aatcatgtca gccatcatcg cgctattgtt cattggtgct atcgtattag gttatttctt
     8941 agcttgggat cgattcgtga tagcactgat catcatattg gccatcgtac tgcttctcca
     9001 acttattatc gatgtgtggc ttaaaccaat ttataaatat cgaacatttg gctacacata
     9061 tgattcacat atcgttacag tacgaaaagg gtttatcatg attaaacaaa cacgtattcc
     9121 aactttcaga attcaaaacg tcgattttaa agaaggatgg ttgatgcgaa aatatcagtt
     9181 agcgacatta acactttcca cagctggagg taatgtcgat gtaacgttga tcgataaagc
     9241 aactgctcaa aaagtgatgg catttataaa aaacaaggat gcgaaagtac caatatcaga
     9301 agcaaagccg atagtagaac aagacgaaaa agaagaggga cctttatgat atatggtgta
     9361 ggactcgatt tagttgaaat agcacggatt atggacactg tacagcgtca accccgcttt
     9421 ccagaacgca ttttatcaga acaagagctc gaacgttatc acaattatac gactgaacgt
     9481 cgccgtatcg aatttttagc cggacgattt gcagtcaaag aggcattcag taaagcgtta
     9541 ggtacgggaa ttggcaaaaa aattacgttt aaacaaattc attgtgaaaa cgatgcacgc
     9601 ggcaagccta cgattcagat ggcaggttac catgtacatg tttccattac acatacagaa
     9661 cattatgcag cagcacaagt gattttagaa caataatgga cgaatataga aagaggaagg
     9721 atgacaatca tgtcagaaaa atattatcgc accaccacga tgaaagtgaa tttagatgcg
     9781 attacagaga attattatgc attaacgaaa ttacaaccga ataaaacgat gatgcctgtc
     9841 gtaaaagcga atgcatacgg tttagggagt atccaaattg cccaacattt aagtcaatta
     9901 ggtgcggaat ttttctgtgt ggccactctg gatgaagcga ttgagttaag aatgcacggt
     9961 ataaaagaga agattttgat tttatctagc attccacctg atgccattaa taaagccatt
    10021 cagcaccgtg ttgctgttac agttccttca agagcatggt tagaagcggc gactgcagaa
    10081 attgacgaag ataatgaaaa gacgttatgg ttacatatta aagtggatac aggcatgaat
    10141 cgacttggtg tgaaagatat tgaagcgtat catgatatta tcaacttcat tcatgcgcat
    10201 gaaaatctcg tctttgaagg cgctttctca cattttcatt ccgctgatga ggacaatgat
    10261 tctgcacact tgcaatatga acgctttgaa gaaattatcg aaagtacaga gcatcctacg
    10321 tacattcata tgcaaaattc tgcgggaacg ttacgcttta atccgtcatt atgtaatgca
    10381 ttcagaccag gtattgcgtt atacggttac tatccatcag cgttcattga aaaaattgca
    10441 actgcacaat tagcaccagc tgttcaactc gttacagaag tgatggaagt gaaatcactc
    10501 attaaaggtg aaacggtcgg atacggtcaa acttacacgg cacctgaaga tatgacgatt
    10561 gcattattgc cgattggtta tgcggacggc tatttacgtt cgatgcaagg cgcgaatgtt
    10621 agaattggca ccacggaatg tgaaattgtt ggtcgggtga gcatggaccg tacagccatt
    10681 cgtgtgccag caacagtgca aatgggagag gaggtcattt taattgatga tcaagcccat
    10741 acgtcacaat ctgtagaaag ccttgcagca caacaacaaa cgattaatta tgaagtgtta
    10801 tgtaatatcg gaagaagagt gccgcgtgtg tattttgtac aagaaatggt tgaaatatcc
    10861 aacgaattgt taaaatagta tggtgattcc gctctgtttt tgttatgatg gacataataa
    10921 aaagagtttt taatgtgttg tattgatatg gaggtcctat ttatgtcagc attcaatcaa
    10981 acaagattta aaaatttaga acagtcgtta aaagaaggtt atgtacagat ggcagattta
    11041 aatctctccc tagccactga ggcgtatcca gttgaatgtg aagcttgcga ttgtaatgaa
    11101 tcacacttga caactgatta caaggaagac taaatgaagc gcggagacgt ttatttagca
    11161 gatttatcac cagtacaggg ctctgaacag gggggagtaa ggcccgttgt cattatccaa
    11221 aatgacactg gtaataagta tagtcccact gtgattgtag ccgcaattac tggtcggatt
    11281 aataaggcaa agataccaac gcatgtcgaa atcgaaaaaa ataaatataa gctcgataaa
    11341 gattctgtta ttttactaga acaaattcga acagtcgata agaaacgatt aaaagaaaag
    11401 ttaacgtttt tgtctgagaa gaagatgaaa gaagttaaca atgcgattgg tattagttta
    11461 ggactgcaca tgaatcatca taaataggct ttaggataac gctcctaaag ccttttacag
    11521 ttttaagtgg aaggagaacg tttaatgaca aatcagaatg aatcgcgata ctttcaactt
    11581 gttgatcaat ttttgcaaag tgaaagtaaa gccagtgttc tcaatcaagc gcattctttt
    11641 tctgaaaatt tatctgatga tgcattattg ccagaagaat ttgtagatat acatagaaaa
    11701 tacgttcaga agtatgagct gtcacgtgaa gacatgattg cgattttaga tattttaaga
    11761 gcggttattg gtagctttgg ttacgattat gaagactata aagcattggt tgaccgtgtt
    11821 gaagtccatg ataaggaatt ggacgtcgct tcacgtttac aacaaacgat gttaaaaaca
    11881 aatatcccac agtttgacgg tatccaaatc ggtgtcattt ctgttgcggc tcaacatgtg
    11941 agtggcgatt attttaactt aattgatcat aaagatggca cgatgagttt tgcggttgcg
    12001 gacgtcattg gtaaagggat tccagctgca ttagccatga gtatgattaa gtttggcatg
    12061 gattcgtacg gccattctca actccctaac gatggtttga agcgtttaaa tcgcgtcgta
    12121 gaaaaaaata tcaatcaaaa tatgtttgta accatgtttt atggacttta tgaagagatt
    12181 aatcatgttc tttactgtag ttcggcaggg catgaaccgg gttatatttt cagagcggaa
    12241 tctgacacat ttgaagaaat caaagttcga ggtcgtgtat taggtgtaag cccacatgta
    12301 agatatcaac aacaagaaat agccattaac attgatgata tgattatcgt ttttacagat
    12361 ggtgtaaccg aaattcgaaa agaaaacggt gagtttattg atactcgtta tttacttaat
    12421 tttatacttg catacaagca attacatcca caagatatcg ttcaactctt atatgaagaa
    12481 ttactgagac tgcaaaaaaa aggcaaacga gatgatttaa ccattttaat tattaagcgc
    12541 gtgcactaaa gttgaaaaat gagattaatg atgtattgaa atgggtaaaa tgaacaagta
    12601 gagaataaag taggagtgta atcaataatg aaccttaata tagaaactga aaagcatgaa
    12661 acacattatg atgtcgcagt agccggtgaa ctagatgttg ccacagtacc ggaacttgaa
    12721 aaagtgctcg ttcctatacg tcaagcaggg acgcacgata tttatgttaa tttggagaag
    12781 ttaaactata tggactcaac aggtttagga ctatttgttg gaactttaaa agcgttaaat
    12841 cagcacgaaa aagaattata cattctaggt gtgaatgatc gtattaaaag gttgtttgaa
    12901 attacaggcc tgaatgattt gatgcatgtc aacgaaggaa cggaggtcga atgatgatgc
    12961 aatccaacga tatcattgaa atgcgacttc ctgcttctgc tgagtatgtc agtttaattc
    13021 gtttgacttt atcgggtgtg tttacacgtg ccggtgcgca ttatgatgac attgaagacg
    13081 ctaaaattgc tgtgagtgaa gcggtgacga atgctgtgaa acatgcttat aaagataaag
    13141 aagaacgagg ctacattcac gtctgttttg aactcgcatc agatcgcatt aaaattgtag
    13201 tgtctgatca aggtgatagt tttaattatc aagaaacaaa acaaaaacta ggcccttatc
    13261 aagaaaatga aagtattgat ttcttgagag aagggggact cggtttattc ttaatcgaat
    13321 ctttaatgga tgaagtaacg gtcgataaag atacaggtgt tacaattagt atgattaagt
    13381 atatcaaaaa agagcaggtg cgaaataatg acgaaagagt cgaaatcagc tagtgctgtt
    13441 tcacctgaac aaatcaacca atggattcaa gcgtatcaga atgatgagga tcatgaagca
    13501 caagaaaaac ttgtgaaaca ttatgaaaaa ctgatcgaat ccttagctta taaatactca
    13561 aaaggtcaat cacatcacga agatttagta caggttggta tggtaggact gattggtgcg
    13621 attaatcgat ttgatttatc atttgataga aaattcgaag cttttttagt ccccactgtc
    13681 ataggtgaaa ttaagcgcta cttaagggat aaaacatgga gtgtccacgt cccacgtaga
    13741 attaaagaaa tagggccgag aatcaaaaaa gtgagcgatg agctaacaaa tgaattagga
    13801 cgttcaccgt caatcagcga aattgcggaa cgtcttgaag tttcggatga agatgtgtta
    13861 gaagcaatgg aaatgggaca aagttataac gctttaagtg tcgaccattc tattgaagcg
    13921 gataaagatg gctctacagt gactttgtta gatattatgg ggcaacacga tgacaattac
    13981 gagttgactg agaagcgaat gatattagaa cggatacttc ctattttaac agatcgtgaa
    14041 agagaaatta ttcaatgtac atttatcgac ggattgagtc aaaaagaaac gggagaacgt
    14101 atcggattaa gtcagatgca tgtctcgcga ttacaaagaa cagctattaa gaaattgcag
    14161 gaggctgcga gaaaatagtg gtacgataaa aggattggga tgttgggttc cggtcctttt
    14221 tgtgtttatg gcaacttgaa ttttgtcatc tgtggcttga tttcaaacat agtgaggaac
    14281 atctaatcat tttatctgtg aagtagaata gatatggagc tttccaggat tgataaaagt
    14341 tgcattagca tggtttttat gagctatgat acacatgcgt cttacgtgct cgctgacata
    14401 cttttagaga tacgtgttaa aatgtagaag aaaagattga gaaagcggtg aatacttttg
    14461 acaaatcatt ttgtacaagc aatacataac caatatcaat atccagttaa acatattgaa
    14521 gcggttctga aattattaga agaaaaaaat actgtgcctt ttattgcacg ttaccgtaaa
    14581 gaagtgacgg gcggtttaga tgaagtcgaa atcaaacaaa ttgctgatga atatcactat
    14641 atggaacagt tgcaaaagcg aaaagatgaa gtgatacata gtattgagca acagggtttg
    14701 ctaacggatg agcttcgacg tgacattcaa cagcaaacaa aattgcaacg tgtggaagat
    14761 ttgtatcgtc cctataagca aaagaaaaag acccgtgcaa cagaggcgaa acgtaaaggc
    14821 atcgaacctt tagcagaatg gatttataga caaaagttag acgctgactt aggagagaaa
    14881 gcgcaggcgt ttttaactga tgaagtaacc tcagtggaag aagcgattca aggtgcgcag
    14941 gatatcattg ctgaaaaaat tgcagatcat ccacaatatc gcaagcaaat tttaaagttg
    15001 acgcaaaaag aagggctcat gacagcacag aaaaagaaaa aggctgagga tgaaaaagcc
    15061 gtgtttgaaa tgtattatga ttatcaagaa cctctccgtc aagttgcgaa tcatcgtatt
    15121 ttagcgatga atcgtggtga aaatgaaaaa atattgcaag tcaaaattga aatggacaaa
    15181 gcgattttgg cacaaaatat taaaaaacaa gaagtcaaag gccacaacga attatcaaca
    15241 attgtgggcg aagcgattga tgacgcgatg aaacgtttaa tctttccttc cattgaacgt
    15301 gaaataagaa ccgatttaac agagcgcgca gaagcacaag cgattacatt gtttagtgaa
    15361 aacttgaaaa atctgttgtt acaaccacca ttaaaaggga agcaaatttt aggcgtcgat
    15421 ccagcttttc gaactggctg taaactcgca gtcattaatc cgtatgggac atttatcgaa
    15481 aaatccgtca tgtacccaca tccacctgta tctaaagtgg ctgaagctga aaaagtcttc
    15541 ttaaaaatgg tgaaagactt cgatattaat ttaattgcga taggaaatgg aacagcgagt
    15601 cgtgaaacgg aacagtttgt cgcacgtatg attcaagacc atgcactcga tgtccagtat
    15661 attattgtga acgaggcagg ggcatccgtg tactcggcgt ctgagattgc gcgtactgaa
    15721 ttccctgatt ttcaagtgga agagcgtagt gccgtatcga ttggtagacg tgtacaagat
    15781 cctttaagtg aactcgttaa aattgatcct aagtcgatcg gtgtcggaca atatcaacac
    15841 gacgtgaacc aaaaggcgct agatgctgca cttgactttg tagttgaaac tgctgttaac
    15901 caagtcggtg tggatgtcaa tacggcttcg agtacattgc ttcagcacgt gtcagggtta
    15961 tcacgacaaa ttgctgataa cattgtgttg tatcgtgaag aaaacggggc cattacccat
    16021 catcgtcaac tgaataaggt taaacgatta ggtgcgaaaa cgttcgaaca aagtatcgga
    16081 tttttacgta ttgtgaatgg taaagaaccg ttagacaata cagcaattca tccagaaagt
    16141 tatgatgcga cttatcaatt attagaaagt ttagaactca aaattacaga tattggcaca
    16201 tctgaattag caaaggtttt atcaacattg aatatagcaa gttatgcgac gaagttaaac
    16261 atcggtgtcc ctacgttaga agacatcgtg aagtcattaa tcgcaccaaa ccgagatcct
    16321 cgtgatgatt atgaaacacc tgaattaaag tcagatgtat tgtcgataga ggatttatca
    16381 aaaggtatga aattgaatgg aacagtgcga aatgttgttg atttcggtgc ttttgtcgac
    16441 atcggcatta agcaagacgg tttagtacac atttcaaaac ttgctaaaaa gtttatcaaa
    16501 cacccgatgg acattgtcag cgttggagac attgtagaag tgtggattga aaatattgat
    16561 gaaaataaag ggaaagttgc tctgacaatg attgatccaa atgaataatg aatctttgca
    16621 gcaactcact gaacaacttg caatggaaca ttttggactc ccttttaaac atcgtattta
    16681 ctttaatcgt cgtttacgta caacgggtgg acgttatatg ttatcttcac atgatattga
    16741 aattaatcct aagcaatacg aacattttgg tgagcaagca cttgttgata ttattaaaca
    16801 tgaattgtgt cactactttt tgcatttgag tggtagaggg catcaacata aagatagaga
    16861 ttttaaagta ttagctgaaa aagtaggtgc gcctagattt tgccaaccga ctgaaagtta
    16921 tacatcaaga gcgaactatg aatatgaatg ccaaaggtgc catagtagtt atgttcgcat
    16981 tagaaaagtt aatgttgtta agatgcggtg tggtcgatgt ggagggcatt taaagttgaa
    17041 aaggtattta taagttgttg aggcactata tgctgactga agaatatgag cgatagtgcc
    17101 ttttttaatg attgatttta tttttgtaat atgtgcttta tgagaaccaa aagttagaaa
    17161 aatagggaga tatgtattga cattatttgt gtgcctgatt ataataacaa agtcgtcaaa
    17221 aaaagttgta agcagttcaa aatgatgttt gacaatgatg acgaaatgtt gtattctaaa
    17281 attcgtcgca aaaagtgaat gttaaagaca gattacaaac attaaaaaaa cattaaaaaa
    17341 gtgttgacac tactaatgtg atataatata ataattattg ttctgaaaaa agaaaacatc
    17401 gttccaagcg gtcgtggcgg aatggcagac gcgctaggtt gagggcctag tgggagaaat
    17461 cccgtggagg ttcaagtcct ctcggccgca tcaaccatca cttaaattaa gtacgcgggt
    17521 gtagtttaat ggtaaaacct cagccttcca agctgatgtt gtgagttcga ttctcatcac
    17581 ccgctccata aaacaaattg aaatgaacat tgaaaactga atgacaatat gtcaacgtta
    17641 attccaataa tttgagtact tcaaaagtac tttc
//
LOCUS       DANHPA010000052        17258 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.052, whole genome shotgun sequence.
ACCESSION   DANHPA010000052 DANHPA010000000
VERSION     DANHPA010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 17258)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17258)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17258
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.052"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            227..310
                     /locus_tag="PTC28_001386"
     tRNA            227..310
                     /locus_tag="PTC28_001386"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:261..263,aa:Leu,seq:caa)
     gene            906..1964
                     /locus_tag="PTC28_001387"
     CDS             906..1964
                     /locus_tag="PTC28_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit IIC"
                     /protein_id="HDK5716672.1"
                     /translation="MATKQINSKHFFSVILNAVGAGVVIALLPNAFLGELLKFFKDGQ
                     PILEMIYQVVLVIQSFMAFIIGALAAHAFKFPGPGVTFVGTSAMIGSGALQFKNGAFV
                     LHGIGDIINVMLIVMIACLMFILLSGKLGSLEIIVLPALIPVTAGMIGLMTLPYVSKV
                     TQSLGHLIHTFTELNPLIMSLLIAITYALLMVTPISLVAIATAISLTGLGSGAGNMGV
                     VAACVTFIMGSIKVNKLGVNIVLLFGAAKMMIPVYFKHPIISIPLIINGFVAGLIAYF
                     MGIQGTPMSAGFGYSGLVGPINAFNRLEGDPMMNIFLLLIAYFVIPFTVGWFVHQLSK
                     KVLPGYRDEIYHFEVLKD"
     gene            2150..3610
                     /locus_tag="PTC28_001388"
     CDS             2150..3610
                     /locus_tag="PTC28_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002470402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding
                     protein/permease"
                     /protein_id="HDK5716673.1"
                     /translation="MKYLGKLMTMMLIVVFSISGIPAKYDAQAASEDQWDVIKDRGEL
                     RVGLSADYAPMEFERTVNGEREYAGIDIELAKKIAKDNGVKLKIVNMQFDSLLGALKT
                     GKIDMIISGMTPTAERKKEVDFSDNYMTVDQKVVVRKKDKDKYKTLKDLAHHRIGAQK
                     QTTQEELAQKEIEGADVQSLTRLPEVILSLKSNKVDAIVMDSAVGKAYLEQNEELTFS
                     DASFADSKKQTAIAIPKDSPKLLKRVNQSIADVNDHNLLAKYEKIAADAMQDDGSFLT
                     KYGAFFLTGIKSTIVISLIGVVLGAVLGSMFALMKISTIRPLKWFASAYIEFLRGTPL
                     LVQVFLVFFGTTAVLGLDISAFICGAIALVINCSAYIAEIIRAGINAVDKGQMEAARS
                     LGLSYSQTMKSVIMPQAIKKILPALGNEFVTVIKESSIVSVIGVSEIMFNAQVVQGAS
                     FDPFTPLLIAAVLYFILTFTLSRLMSFLEGRMSISD"
     gene            3603..4328
                     /locus_tag="PTC28_001389"
     CDS             3603..4328
                     /locus_tag="PTC28_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003246629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDK5716674.1"
                     /translation="MIKISKLNKSYGQNEVLTGIDLEIAQGEVVAIIGPSGSGKSTLL
                     RCMNLLEVPTSGQVIFEGRDLTDKGTKVDELRQKMGMVFQNFNLFPHKKVIDNIMLAP
                     QLLKKGDAQQLKTRALDLLSKVGLADKAEAYPNQLSGGQKQRVAIARALAMDPDVLLF
                     DEPTSALDPEVVGEVLAVMKSLAKEGMTMVVVTHEMDFAKNVSDRVVFMADGVVVEDG
                     PPHEIFENPQHERTQNFLKRVLN"
     gene            4484..5614
                     /gene="queG"
                     /locus_tag="PTC28_001390"
     CDS             4484..5614
                     /gene="queG"
                     /locus_tag="PTC28_001390"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HDK5716675.1"
                     /translation="MDVRGLKEEIIAYAHTIGINSIGFTTADPFDELKQKLVDYHAKG
                     YASGFEPSDIALRTEPKLSLPTARSIIAIAVGYPNKLKGAPKSVRGDRRGVFARASWG
                     QDYHSIMRRRLDDLAAFIQRKVPDVELMSMVDTGVLSDRAVAERAGLGFVGRNGFVIN
                     PDLGTWSYLGEMLVSIPFPPDDPLLDSCGDCTICVDRCPTGALVGNGQLNSQKCISFL
                     TQTKGYLPDEYRYKIGNRLYGCDTCQQVCPKNRGINTEQDDIHLEPEILKPRLVPLLK
                     MNNKTFKNQFGHLAGAWRGKKPIQRNAILALAHFKEETAIPDLKDVAETDPRPMIRAT
                     AFWAIGQILGEAAKDYVMSHYDNELEEVQVEMIKGLEMRRDE"
     gene            5614..6084
                     /gene="trmL"
                     /locus_tag="PTC28_001391"
     CDS             5614..6084
                     /gene="trmL"
                     /locus_tag="PTC28_001391"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HDK5716676.1"
                     /translation="MPIHVVLYQPEIPANTGNIARTCAATDTHLHLIRPLGFSTDDKM
                     LRRAGLDYWKYVSITYYDNIESFFEQTEGQYFLLTKFGSKNHTSQDFSDVDQNYYFIF
                     GKETTGLPDWVKDKYDNTALRIPMNENVRALNLSNTAAILVYEALRQQNYPNLQ"
     gene            6278..6877
                     /locus_tag="PTC28_001392"
     CDS             6278..6877
                     /locus_tag="PTC28_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate isomerase"
                     /protein_id="HDK5716677.1"
                     /translation="MAMNFKVFKDAETAATFTADILRKQLNNNPTSIVGLHLNQEEAP
                     VLDALKKDVDRHSVDFSQIHVLDYDAQQSYYQALGVPEKQIHHVPEDEKVESFIKHHA
                     KTKDNKGKLTLQVVTIDTKGQIGIPMNDALLPAREIIVVVTGAVKAEQVKKLYEENGN
                     TTFIPSALKSHRMVTVVLDEAAAQGLPEDVRNYFTSLYA"
     gene            6898..7059
                     /locus_tag="PTC28_001393"
     CDS             6898..7059
                     /locus_tag="PTC28_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019164969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716678.1"
                     /translation="MKDEQKHYDNEMVDSFDDVVELGKEMEQISEANDEEKLNQAHDS
                     KVRSDKDTK"
     gene            7180..7623
                     /locus_tag="PTC28_001394"
     CDS             7180..7623
                     /locus_tag="PTC28_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019164970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716679.1"
                     /translation="MKLHQKWVTLIIISTIINLLSIKAFPLALGTLYLPVLFKIVQLQ
                     LNLSNGLVDDAQSHVKTFVKTNQKGIVISVICCIAITVALTIYLDDFYNQFSGILGVF
                     IQISPVMMVIGLVLYILAAIAVVQAVKHKFMHTEAVKVKETTSNE"
     gene            7853..9238
                     /gene="fumC"
                     /locus_tag="PTC28_001395"
     CDS             7853..9238
                     /gene="fumC"
                     /locus_tag="PTC28_001395"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011302807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HDK5716680.1"
                     /translation="MSVRIEHDTFGQIEVPADKYWGAQTQRSKQNFPVGKEKMPIEVV
                     YGFAQLKRAAALANNELGKLSDAKKDAIVYACDRILAGELDEHFPLVVWQTGSGTQSN
                     MNVNEVVSYVANENLKEKGSDETIHPNDDVNKSQSSNDTFPTAMHVALYHEVEKRLEP
                     ALKGLRETFYKKENEFKDIIKIGRTHLQDATPITLGQEISGWRYMLDVCENLLAESKK
                     HILNLAIGGTAVGTGINAHPEFGTKVAGYIAENTGYPFVSSENKFHALTAHDEVVQLH
                     GSLKALAGDLMKIANDVRWLASGPRAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMV
                     AVQVMGNDTVVGFSSAQGNFELNVFKPVILHNTLQSIYLLADGMETFNQNCAVGIEPI
                     PENIDNYLNRSLMLVTALNPHIGYEKAAAIAKKAHKEGITLKESAIQSGYVTEEQFEE
                     WIKPENMVHPK"
     gene            9259..10785
                     /gene="ppx"
                     /locus_tag="PTC28_001396"
     CDS             9259..10785
                     /gene="ppx"
                     /locus_tag="PTC28_001396"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HDK5716681.1"
                     /translation="MERNGLIDIGSNTIRLVIFRYDPKTGLNEIQNIKTPARLSQYLD
                     AEQNMTQEGIDVLTTALRSFKKVATDFEVEHLYPIATAAMRQSKNQKEILKHIQQELD
                     LEIIMIPEEDEAFYGSYAVTHTTSIRNGITVDIGGGSTELTLFKEKKIKEAISFPFGV
                     VTLTRMFFEGKEHNDKDAIKKMEKFLKSEFGKVSWIQNQHINLVGIGGSARNCARIHQ
                     SLHQYPIAGVHGYTMEQSDLKEVFQMLKKSSRDTLTTLDGLSRDRVDIILPAVSVFNV
                     LFDMIDATAFTFSRKGIREGFIMNQIAKKYPKEFNKTNVLQDALRHLANEYKIEESGA
                     NQRVKLAESLLEQLTKEKKLKIDEDLKQVFLEAAYIYYLGRFIDSDSSSQHTYYIIAN
                     SGINGLSHKERVRLALLASFKNKTLLKLYSEETNWFSDDELSDIQALGGIIKFVNALN
                     ISNTNSVQDVKLQSTKEGYDLFVNDQGESIAESYQSNRQKKHIEKVLKTKVNIIFTNA
                     "
     gene            10861..13029
                     /locus_tag="PTC28_001397"
     CDS             10861..13029
                     /locus_tag="PTC28_001397"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019164974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA degradosome polyphosphate kinase"
                     /protein_id="HDK5716682.1"
                     /translation="MKVTIEKGSLDLNHPDYYNNREVSWLDFNYRVLQEACDDQNPLL
                     EQLKFIAIGSANLDEFFMVRVAGLKDQVKMGFNKPENKAQLTPQQQLKAIEQKNRQNV
                     AFQYQRFNTLVETLKTYDVYLCKPDVLNEDMRKQLEQIFLNDILPTLTPLGIDAYRPF
                     PKLNNKTLNIFVDIDTGDEINSAIVQIPTLLNRFITINEGNRQYIILIEDMISFFMGY
                     LFKGYEILNTYTFRITRNADLTIHEDGAEDLLIEIERFLKERKSGAAVRLEIDHREQQ
                     EMQIDWLIDTLELEPQDVYYTNGPLDLTMVFELVDHLSHKLKDLKYERYTPQVPQSLG
                     NDNVYDLALKRDIFFHHPYESFDPIVDFITEASEDPDTLAIKQTLYRVSSDSPIIEAL
                     KNAAENGKQVTVLVELKARFDEENNVHWAKMLEEAGCHVMYGMTHLKTHSKITLVVKR
                     VNGKLVPFVHLGTGNYNDKTAKLYTDMGIITTNREIGEDAMNFFNYLSGYSMKPDYQQ
                     LIVAPYEIRDLFIERIDEEIESHRQHGNGKMMMKMNSLTDKALIKKLYEASQAGVQVK
                     LIIRGICCLKPGIPGISDNIEVVSIVGRLLEHSRIYYFYNNGKEKIYLSSADMMTRNM
                     IKRVEILFPILDKRIARRLVDFMHLQLSDNQKGRYQDASGVYHYVKNELAPINSQEYL
                     MREAQEYGLALSKQNMIETGQPVRAKRNWMDRVKGHLKRK"
     gene            complement(13097..13927)
                     /locus_tag="PTC28_001398"
     CDS             complement(13097..13927)
                     /locus_tag="PTC28_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDK5716683.1"
                     /translation="MKFKVADTFNEQSIRDIFKTLQLPKKELHTLNMSKSITVNDEAA
                     NLQTIVHTGDEIYIPDEDAKSQYLPSYRYAQIAYEDDFLAIVYKPKGVKTHPNDLKES
                     NTLMNHVIYTLNHPYVEPIHRLDQETVGLLIVAKHPIIKKILDRMLENNDIHRIYKAQ
                     VKSLLPIKPQTIDLPIGKDKFHPNKRRVSPTGQRAVTHILSSEMIEEGVCEVMLKLDT
                     GRTHQIRVHLAEIGYPVLGDPLYSDSKLRQLQLESYQIEMTHPITQQPISLTIDDIKQ
                     "
     gene            14081..15205
                     /locus_tag="PTC28_001399"
     CDS             14081..15205
                     /locus_tag="PTC28_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing sensor histidine kinase"
                     /protein_id="HDK5716684.1"
                     /translation="MEKPTRLALLKEIAEFLNEETELQSMLDGALDSLIKGSDFTTGW
                     IFFIDEEGHHTLESQHSLPSALTNRQCHYMKEGTCWCVQAYHNHKLTKASNIINCSRI
                     NLASREFVTETEDITHHATVPLRSGNEQFGLLNVATPFTTHYSDEDLELLESVAFQIG
                     SAIKRIDLNNQEKEAARINERNRLARDLHDSVNQMLFSLKLTAHAAGQMTQEETSKRA
                     FMQIEQTSQNAVNEMRALIWQLKPVGLEKGLVHALKNYASLIGLDIDVTVKGLIDLEN
                     KIETHLYRVMQEAMNNTKKHAQTNHMDIVLNQTDDYLIVELKDNGIGFDVTQVDSAEK
                     HGLSNMRQRIKFLKGTIKMASDQGTKITIQLPLQQPREGQ"
     gene            15205..15831
                     /locus_tag="PTC28_001400"
     CDS             15205..15831
                     /locus_tag="PTC28_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDK5716685.1"
                     /translation="MPKIALVDDHFIVRQGLEFLLSTQPQIEVVGSFGEGQALLDALA
                     TDQIEPELILVDLVMPEMNGITLIQKLKEQHAGIKILVLTSYVDEEHVMSAMQAGADG
                     YEMKDVDPEALMTSIETVLQGDKVIHKDAQQVMDTVITKPHMLNKLSKRETEVLKEMA
                     KGKTNKEIAETLFVSEKTIKTHVSHIFSKLEVTDRTQAAIYAMENHLV"
     gene            complement(15981..>17258)
                     /locus_tag="PTC28_001401"
     CDS             complement(15981..>17258)
                     /locus_tag="PTC28_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016425457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
                     /protein_id="HDK5716686.1"
                     /translation="KGLTVKIIIALILGIALGSIFNFYVESKFVGFIDQYVFNVIGQI
                     FLNLIFMLVVPVVFVSIVLGVIGVGDPKLLGGIGLKTLVFFLSTTAIAITLAMCLALI
                     VKPGAGHSDLLKSEEVTTYQKKLDDQKATGASPINQTFDQTLINFFPKNAIQSMTTGN
                     MLQIITFAIFVGIGIMMVGERGRIVHQFFEQFNEVLMYIISMVMNVFAPIGTFGLVAH
                     AFTGAGFGAIRQLGLYFIVVLAALFIHFFVVYGGAVKFLAGRSPIEFFKGFFPAITVG
                     FGGSSSNAALPVSMECTKKMGVKPEIASFVQPLGATINMDGTAIMQGVATIFIAQLSG
                     ADLTVLQLITVVAVAVIASVGTAGVPGVGLIMLAMVLTAVDLNPAAIGIILGIDRLLD
                     MTRTAVNITGDAACALILSEREGRKLKGNMHVE"
BASE COUNT         5783 a         2773 c         3560 g         5142 t
ORIGIN      
        1 cgattgtgat accgattaaa tgttacatta taaattacaa attactataa ttgttacgac
       61 ttgttttaaa aacttattac gaatgttaat acgcttgttg acttttaagt cacattgaat
      121 taatctgttt atagatgttt tcgaggattt ttcaaaatcc cgcgaagctc aaacgagttt
      181 tgcgcgtatg aaagtttagg aaaatgtata aaatcaataa tagtgggccg gtgtggcgga
      241 attggcagac gcgcgggact caaaatcccg tgtcttcaca gacgtgtcgg ttcgaccccg
      301 accaccggta ctaataacca taattacaca ccaaagcaca tcagaaaccc tgttattacg
      361 gggtttcttt ttatttatac accatagaat atcaaaattt tggtcacaca ttggacacga
      421 ttgctacatt gtatgtccaa tgtgtccaag tattatagcg catttaatag ctcaaattaa
      481 ctggcacgaa aatggcacga taacgccttg gtgtgcggca cgtgaaacat ctttgcacgt
      541 tattcttaat aaatgttctt aagcgcatgt ttgagcctga tttttttatg tattctatca
      601 ttgagtcaca tcgataaatt gaccatgttt ttctaaccgt gattgttata cgacaaaaag
      661 cattgattat ttcactattt tagcctttgt gtaatcaaag tttaaagaaa atggtcattg
      721 caattttcac tatctctctc atgcaaagat agttgatctt tttccaattt tctactaaaa
      781 tccacctaat attcataaca ctttaaagca ttgatgaata ttttaagaaa ttttcagaat
      841 actattgtac cataagttca cttatattat gattaaccta ttctgataag cggagggttg
      901 cgtaaatggc gacaaagcaa attaacagca aacatttttt tagcgttatt ttaaatgctg
      961 taggggcagg tgtggtaatt gcgttacttc ctaatgcctt tctaggtgaa ttgttgaagt
     1021 tttttaaaga cggtcaaccc attcttgaaa tgatctatca agttgttttg gttatccaat
     1081 catttatggc atttattatc ggggcacttg ctgcacatgc ctttaaattt ccaggtccag
     1141 gggtaacatt tgtagggact tctgcgatga ttggttcagg agcgttacag tttaagaatg
     1201 gtgcgtttgt gttacatggc attggggata tcattaatgt catgctcatt gtgatgattg
     1261 cgtgtctcat gtttatttta ttgtctggca aattaggatc attagaaatt atcgtgttac
     1321 ccgcgttaat tcctgtgact gcgggaatga ttggacttat gacattacct tatgtgagta
     1381 aagtaacaca atcattagga catttaattc acacgtttac tgaacttaat ccattaatta
     1441 tgagtctttt aattgcgatt acatatgcct tattgatggt gacaccgatt tcacttgtag
     1501 cgatagcaac ggcaatatct ttaacaggtt tgggaagtgg tgctggtaat atgggtgttg
     1561 tagcggcgtg tgttacgttt ataatgggat cgataaaggt caataaacta ggagtgaata
     1621 tcgtactttt atttggtgcg gctaaaatga tgattcctgt ttatttcaaa catcctatta
     1681 ttagcatccc gttaatcatc aatggtttcg tggcaggtct gattgcatat tttatgggca
     1741 tacaaggtac accgatgtca gcaggttttg gctattcagg gctcgttgga ccgattaatg
     1801 cgttcaaccg tttagaagga gatccgatga tgaatatttt cttattattg attgcctatt
     1861 tcgtgattcc ttttacagta ggatggtttg tacatcaatt gagtaaaaaa gtattgccag
     1921 gttatcgaga tgaaatttat cattttgaag tactgaaaga ttaaatgtga gccgtcatat
     1981 atgaatttga aatgaatcat agcataatga ataaaacatc aatcaacgat acaaagttga
     2041 ttgatgtttt ttgttgttta gaaggttaat gaaaaatttt gaaaattatt attgcataaa
     2101 cttacatata aatgtataat aatcaatatt atcgggagga ggcagtgtaa tgaagtattt
     2161 ggggaaactg atgacaatga tgttaatcgt cgtatttagt atttcgggaa ttcctgcgaa
     2221 gtatgatgcc caagctgcaa gtgaggatca gtgggatgtc attaaagatc gtggagaatt
     2281 gagagtggga ctatctgcag actatgcgcc aatggaattt gaaagaacag tgaatggtga
     2341 acgagaatat gcaggtatcg atattgaatt agccaaaaaa attgcgaaag ataatggtgt
     2401 taaattaaaa atcgtcaata tgcagtttga tagtttactt ggtgcattaa aaactggaaa
     2461 aatcgacatg attatttctg ggatgacacc aacagctgaa cgtaaaaaag aagtggattt
     2521 ttccgataac tatatgacag ttgatcaaaa agtcgttgtt cgtaaaaagg ataaagataa
     2581 atataaaacg ttgaaagatt tagcgcatca tcgtattggg gcgcaaaaac aaacgacgca
     2641 agaagaatta gcgcaaaagg aaattgaagg tgcagatgta caatcgttaa cacgtttgcc
     2701 tgaagtcatt ttatctctca aaagtaacaa agtagatgcg attgtgatgg atagtgctgt
     2761 aggtaaggcg tatttagaac agaatgagga attaacgttc tcagatgcat cgtttgcaga
     2821 ttcaaaaaaa cagactgcaa ttgcgattcc gaaagattca cctaagttat taaaacgagt
     2881 aaatcaatct attgcagacg tcaatgatca caatttgctt gctaaatatg aaaaaattgc
     2941 tgctgatgca atgcaagatg atggtagctt tttaacaaaa tatggggcgt ttttcttaac
     3001 aggtattaaa agcacaattg tcatttcgtt aatcggagtt gtattaggcg cagtgcttgg
     3061 ttccatgttt gcgttgatga aaattagtac aattcgcccg ttgaaatggt ttgcttcagc
     3121 gtatatcgag tttttacgtg gcacaccgtt acttgtacaa gtatttttag tattctttgg
     3181 tacaacagca gtattaggtt tagacatttc agcatttatt tgtggggcca tcgcgttagt
     3241 gattaactgc tcggcttaca ttgcagaaat tattcgtgca ggaattaatg ccgtagataa
     3301 aggtcaaatg gaggcagcac gtagtttagg tttaagctac agtcaaacga tgaagtcagt
     3361 tattatgccg caagcgatta aaaagatatt gcctgcatta gggaatgagt ttgtgacagt
     3421 gattaaagaa tcttctatcg tttctgtaat tggtgtgagt gaaattatgt tcaatgcaca
     3481 agttgtacaa ggtgcatcat ttgatccatt cacgccattg ttaattgccg ctgtattgta
     3541 ctttatttta acattcacgc tgtcacgttt aatgagcttt ttagaaggga gaatgagtat
     3601 cagtgattaa aatttcaaag ttaaataaat cgtatggtca aaatgaagtg ttaacaggta
     3661 ttgatttaga aattgcacaa ggtgaagtgg tcgcgattat tggtccttct ggaagcggga
     3721 aaagtacatt actgagatgt atgaatttat tagaagttcc tacatcaggg caagtcattt
     3781 ttgaaggtcg tgatttgact gataagggca ctaaagtaga tgaattacgt caaaaaatgg
     3841 gcatggtatt tcaaaacttc aatttatttc cacataaaaa ggtgattgat aatattatgc
     3901 tagcgccaca attattgaaa aaaggagatg cacaacaatt aaaaacacgt gcattggact
     3961 tattatcaaa agtaggtttg gcagataaag cagaagccta tccgaatcaa ttatcaggtg
     4021 gacaaaagca aagggttgcg attgcgcgtg cgttggcgat ggatcctgac gtgttgttat
     4081 ttgacgaacc cacatccgca ttagatcctg aggtggttgg cgaagtatta gcagttatga
     4141 aatcactcgc taaagaaggg atgaccatgg ttgtcgtgac gcatgaaatg gattttgcga
     4201 aaaatgtgag tgatcgtgtt gtatttatgg cagatggtgt tgtggtagaa gatggaccac
     4261 cacatgaaat ttttgaaaat ccgcaacatg aacgtacaca aaatttcttg aaacgtgtgt
     4321 taaactaaat atcaatgaaa gggctaggaa tttattgatt ccggctcttt tttagttgat
     4381 gcttcaaatg atgtaaatgg gattccaagc ttctatggaa taattcaacg caatgacagt
     4441 cagatatgtt aaaatagtat ggtgatttta aagaggtgac atgatggatg tacggggatt
     4501 gaaagaagag ataatcgcat atgcgcatac aataggtatc aatagtattg gttttaccac
     4561 tgcagatcct tttgatgaat tgaaacaaaa acttgtcgat tatcatgcaa aaggctatgc
     4621 atcaggtttt gagccgtctg atattgcttt acgtacagag ccgaaattat cattaccgac
     4681 tgcacgttca attattgcga ttgctgttgg atacccgaat aaattaaaag gtgcgcctaa
     4741 aagtgttcga ggtgatcgtc gaggtgtgtt tgcacgcgca tcatggggac aagattacca
     4801 ttcgattatg cggcgacgtt tagatgattt ggctgctttt atacaacgta aagtgcctga
     4861 tgtagagctc atgtcaatgg tggatacggg cgtgctatct gaccgtgcag ttgcagaacg
     4921 tgcggggctt ggatttgtag gacgtaatgg tttcgtcatt aatcctgacc tagggacgtg
     4981 gtcgtattta ggagaaatgt tagtgagtat tccatttcca ccagatgatc cactccttga
     5041 tagttgtgga gattgtacga tttgtgttga tcgttgtcct acgggcgcgc tcgttggtaa
     5101 tgggcaattg aacagccaaa aatgtattag ctttttaacg caaacgaaag gctatttacc
     5161 ggatgaatat cgttataaaa tcggtaatcg tctgtacggt tgtgatacgt gtcaacaagt
     5221 ttgtccgaaa aatcgaggta ttaatacgga acaagacgat atacatctag agccagaaat
     5281 tttaaaacca cgattagttc cattactgaa aatgaataat aagacgttta aaaatcaatt
     5341 tggccatctt gctggtgcgt ggagaggtaa aaagccgatt caacggaatg cgattcttgc
     5401 actggcacac tttaaagaag aaacggcaat tcccgattta aaagatgtgg ctgaaacaga
     5461 tccgagacct atgattcgtg cgacagcctt ttgggcaatc ggtcaaattt taggtgaggc
     5521 cgctaaagat tatgtgatgt cacattatga taatgaactt gaagaagtcc aagtcgagat
     5581 gattaaagga ttagaaatga ggagagatga ataatgccaa ttcatgtagt tttatatcaa
     5641 ccagaaattc ctgcgaatac agggaatatt gcacggacat gtgcagcgac tgacacacat
     5701 ttacatttaa ttcgtccact aggttttagt actgacgata aaatgttgcg acgtgccggc
     5761 ttagattatt ggaaatatgt atcgattact tattacgaca atattgaatc attttttgaa
     5821 caaacagagg gtcaatattt tttactgaca aagtttgggt ctaaaaatca tacgtcccaa
     5881 gatttttcgg atgttgatca aaattattac tttatttttg gtaaagaaac aactggatta
     5941 ccagactggg tgaaggataa gtatgataat acagcgttac gcattccaat gaacgaaaat
     6001 gtacgtgcac tgaatttatc taatactgca gcaattctag tttatgaggc gttaagacaa
     6061 caaaattatc caaatctaca atagatagct atgaatttca tagcatggtt catagtttga
     6121 ggttgggaca agaacaaatg cgtaaaaaaa ggttataata acgataacgg agacccttcc
     6181 gaatgttcct cattttttaa tgttttaatt gatgtttaaa atgggtatgt aattattaat
     6241 gtaaaagacg agtaggacaa tagaggagtg tacgataatg gcaatgaatt ttaaagtatt
     6301 taaagatgca gaaacagcag caactttcac agcagatatc ttaagaaaac agttaaataa
     6361 caatccgaca tcgattgtag gtcttcattt aaatcaagaa gaagcacctg tattagatgc
     6421 attaaaaaaa gatgtcgatc gtcatagcgt tgatttcagt caaattcatg tattggatta
     6481 cgacgcgcaa caatcatatt atcaagcatt aggtgtccca gaaaaacaaa ttcatcacgt
     6541 accagaagat gaaaaagtgg aatcatttat taaacatcac gcaaaaacaa aagataataa
     6601 aggtaaattg acgttacaag tcgtgacaat cgatacaaaa ggtcaaatcg gtatacctat
     6661 gaatgacgca ttgttaccag cgcgtgaaat tattgttgtc gtgacaggtg cagtgaaagc
     6721 agaacaagtg aagaaattat acgaagaaaa cggtaatacg acatttattc cgtcagcatt
     6781 aaaatcacat cgtatggtaa ctgttgtcct tgatgaagca gctgcacaag gtttacctga
     6841 agatgtgcgc aattacttta cttcattgta cgcataagag aagaggtgaa gggcataatg
     6901 aaagacgaac aaaagcatta tgataatgaa atggttgata gttttgatga tgttgtggag
     6961 ctcggtaaag aaatggaaca aatttctgaa gcgaacgatg aagagaaact caatcaagca
     7021 catgattcca aagtgcgttc tgataaagat acaaaataaa aattaatgag aagactggtt
     7081 taccatggag atggtccagt ctttttattt tctttcgtgt acctcgagat aaatgtgata
     7141 aaatgggagc atgttaaaaa atgatgaaag gtgacataca tgaagttaca tcagaaatgg
     7201 gttacattaa ttataatttc aacaatcatc aacttattat cgattaaagc ctttccattg
     7261 gcgttaggga cgttatattt accggtatta tttaaaattg tacaacttca actaaactta
     7321 tccaatgggt tagtcgatga tgcacaatca cacgttaaaa cttttgtgaa aacgaatcaa
     7381 aaaggcatcg ttattagtgt tatttgttgt atcgcgataa ctgtcgcgtt gacgatttat
     7441 ttagatgatt tttacaatca gttcagtggc attttaggtg tattcattca aatcagtccg
     7501 gtcatgatgg taataggcct agttttgtat attttggcag ctattgcagt cgttcaagct
     7561 gtgaaacaca aatttatgca tactgaagcg gtaaaagtta aagaaacaac ttcaaatgaa
     7621 taaatgatgg attgctttca ttgaattatc actttgtaga ggcgatggat gtgatgtttc
     7681 aatatgctac tttcacgtat tgttgaaata aggtcgggaa attaaatttt ctcggccttt
     7741 tttatttgga gaaaaaacgc aattgcacgc caatgttcat tgaatggcga tttcgtttaa
     7801 tgctataatt taagtgacaa gaatattgaa aaatcaaagg ggagcgagag atatgtcagt
     7861 aagaattgaa catgatacat ttggtcaaat tgaggtgcct gcagataaat attggggcgc
     7921 tcaaacacaa agaagtaaac aaaattttcc agtcggtaaa gaaaaaatgc cgattgaggt
     7981 ggtttatggt ttcgcacaat taaaacgtgc agctgcattg gcaaataatg aattaggaaa
     8041 gctaagcgat gcgaaaaaag atgcgattgt atatgcttgt gatcgtattt tagcaggcga
     8101 attagatgaa cattttccat tagttgtgtg gcaaacagga agcggtacac aaagtaatat
     8161 gaatgtgaat gaagttgtga gctatgtggc caatgaaaac ttaaaagaaa aggggagtga
     8221 cgaaacaatc cacccgaacg atgatgtcaa caagtcacaa agttctaatg acacattccc
     8281 gacagcaatg cacgttgcac tgtatcatga agtggaaaaa cgtttagaac ctgctttgaa
     8341 aggcttgcgt gaaacgttct ataaaaaaga aaatgagttt aaagacatca ttaaaattgg
     8401 acgtacacac cttcaagatg cgacaccgat tacattaggc caagaaatta gtggttggcg
     8461 ctatatgcta gacgtgtgtg aaaacttatt ggcagaatct aaaaagcata ttttaaactt
     8521 agctattggt ggcacagcag tcggtactgg cattaatgca caccctgaat ttggtacaaa
     8581 agttgcagga tacattgcgg aaaatacagg ttatccattt gtatcatctg aaaataaatt
     8641 ccatgcgtta actgcacatg acgaagtggt tcaattacat ggttcactca aagcgcttgc
     8701 gggtgactta atgaagattg cgaatgatgt aagatggtta gcgtcaggcc ctcgtgcagg
     8761 tttagctgag atttctattc ctgaaaacga gccaggttca tcgattatgc caggtaaagt
     8821 gaacccaaca caatgtgaaa tgttaacaat ggtggctgta caagtcatgg gtaacgatac
     8881 ggtagtaggg ttctcaagcg ctcaagggaa tttcgaatta aacgtcttta agcctgttat
     8941 tttgcataat acattacaat ctatttattt attagcagac ggtatggaga cattcaatca
     9001 aaactgcgca gtaggtattg aacctattcc tgaaaacatt gataactatt tgaaccgttc
     9061 attgatgtta gtgactgcac tgaatccaca tattggttac gaaaaagcag cagccattgc
     9121 gaaaaaagca cataaagaag gaataacttt aaaagaatct gcaattcagt caggctatgt
     9181 gacagaagaa caatttgagg aatggattaa gccagaaaac atggtccacc cgaaatagta
     9241 tggaggcaag ttttaaacat ggaacgtaac ggtttaatag atattgggtc aaatacaatc
     9301 cgcttagtga tttttcgata cgatccgaaa acaggattaa atgaaattca aaacattaaa
     9361 acaccggcac gattaagtca atatttagat gctgaacaga atatgacgca agaagggatc
     9421 gatgttttaa ccacagcact cagaagtttt aaaaaggtag cgacagattt tgaagtagaa
     9481 catttgtatc cgattgcgac agcagcgatg cgtcaatcca aaaaccaaaa agaaatttta
     9541 aaacatattc aacaagaact cgaccttgaa attattatga ttcctgaaga agatgaagct
     9601 ttttatggct cttatgcagt cacgcacacg acaagtattc ggaatggcat cactgtcgat
     9661 atcggtgggg gctctacaga gttaacacta tttaaagaaa aaaagattaa agaagctatc
     9721 agttttccgt tcggtgttgt cactttaaca cggatgttct ttgaaggaaa agagcataat
     9781 gataaagatg cgataaagaa aatggaaaag tttttgaaaa gtgaatttgg caaagtgtca
     9841 tggatacaaa atcagcatat taatttagtc ggtatcggtg gttctgcgcg taactgtgcg
     9901 cgtattcatc aatctttaca tcagtatcct atcgcgggtg tccatggcta tacgatggaa
     9961 caaagtgatt taaaagaagt atttcaaatg cttaaaaaat cttcacgtga cacgttaacg
    10021 actttagatg gattgagtcg tgatcgtgta gacatcattt tacctgccgt atcggtattt
    10081 aatgtgttat tcgatatgat tgatgcgaca gcgttcactt tctcaagaaa agggatacgt
    10141 gaaggtttca ttatgaatca aattgctaaa aagtatccaa aagaatttaa taaaaccaat
    10201 gttctgcaag atgcgttacg tcatttagcc aatgagtata aaatcgagga aagtggcgcc
    10261 aatcaacgtg tgaaactagc cgaatcgctc ttagaacagt tgacgaaaga gaaaaagctt
    10321 aaaattgatg aagatttaaa gcaagttttt cttgaagcgg cgtatattta ttatttaggt
    10381 cgatttattg attccgattc gagttcacaa catacgtatt acattatcgc aaattcaggg
    10441 attaacggct tatcacataa agagcgtgtg cgactggcat tactcgcaag ctttaaaaat
    10501 aaaacgttac tcaaattgta tagtgaagag acaaattggt tttctgatga tgaactatca
    10561 gacattcaag cattaggggg cattattaag tttgtaaacg cattaaatat ctctaatacg
    10621 aacagtgtcc aagacgtgaa attacagtca acaaaagaag gttacgactt gtttgtcaat
    10681 gatcaaggtg aatcgattgc cgaatcttat caatctaatc gacaaaagaa acatatcgaa
    10741 aaagtactta aaacaaaggt taatattatt tttacaaatg cttaaattat agcccattca
    10801 ttttatgtta cgctaaatag ggacttgcgc tatgttttgt aaaatattaa tggggtgaca
    10861 atgaaagtga ctattgaaaa aggaagtttg gacctgaacc atccagatta ttataacaat
    10921 cgtgaagtca gctggttaga cttcaattat agagtattgc aagaagcctg tgacgaccaa
    10981 aacccattac tcgagcaact taagtttatt gcgattggga gcgcaaattt agatgaattt
    11041 tttatggtgc gtgtggcagg attaaaagac caagtcaaaa tgggatttaa taagcctgag
    11101 aataaagcgc aattaacgcc gcaacaacag ttaaaggcaa ttgaacagaa aaatcgtcaa
    11161 aacgttgcct ttcaatacca acgtttcaat actttagttg aaactttgaa aacatatgat
    11221 gtgtatttat gcaaaccgga tgttttaaat gaagatatgc ggaagcaact tgaacaaatc
    11281 ttcttaaatg atattttgcc gacattaaca ccgttgggca ttgatgcata tcgaccattt
    11341 ccaaaactaa acaataaaac attaaatatt tttgtcgata ttgatactgg tgatgaaatt
    11401 aattcagcaa tcgttcaaat ccccacacta ttaaatcgtt ttattacaat taatgaaggc
    11461 aatcgtcaat atattatttt aatcgaggat atgatttctt ttttcatggg ttatcttttc
    11521 aaaggatatg aaattctgaa tacgtataca tttagaatta caagaaatgc cgatttaacg
    11581 attcatgaag atggtgccga agatttgttg attgaaattg aacgcttttt aaaagagcgt
    11641 aaaagtggtg cagcggtgag gttagaaatt gatcatcgtg aacaacaaga gatgcaaata
    11701 gattggttga ttgatacgtt agaattagaa cctcaagatg tgtattatac gaatggccca
    11761 cttgatttaa cgatggtatt tgaattggtg gatcatttat cacataaatt aaaggacttg
    11821 aaatacgagc gctatacacc acaagtgccg caatctttag gcaatgacaa tgtgtatgat
    11881 ttggcgttga aacgtgatat tttcttccat catccgtatg aatcctttga tccgattgtt
    11941 gactttataa cggaagcatc tgaggacccc gacacattgg caattaaaca aacgttatac
    12001 cgtgtcagca gtgattcacc gattattgaa gcacttaaaa atgctgctga aaatggtaaa
    12061 caagtcacgg tattagtgga attaaaagcg cgtttcgatg aggaaaataa tgtgcattgg
    12121 gcaaaaatgt tggaagaagc gggttgtcac gtcatgtatg gtatgacgca tttgaaaacc
    12181 cacagtaaaa ttacattggt cgtcaaacgt gtcaatggta aactcgttcc ttttgtgcat
    12241 ttaggtacag gaaattacaa cgataaaacg gccaaattgt atacagatat gggaattatt
    12301 acaacaaatc gagaaattgg agaagatgcg atgaatttct tcaattattt gagtggttat
    12361 tccatgaagc cggattatca acagttaatc gtggcaccat acgaaatacg tgacttattt
    12421 attgaacgta ttgatgaaga aatcgaaagc catcgtcaac acggaaacgg taaaatgatg
    12481 atgaaaatga attcattgac ggataaagca ttaattaaaa aattgtatga agcgtcacaa
    12541 gcaggtgtac aagtgaaatt aattattcgt gggatttgtt gtttgaaacc gggcattcct
    12601 ggtattagcg ataatattga agtcgtgagt atcgtcggac gtttgttaga acattcacgt
    12661 atttattact tctataacaa tggcaaagag aaaatatatc tatcttctgc agatatgatg
    12721 acgcgaaata tgataaaacg tgttgaaatt ttattcccaa ttttggataa acgcattgcg
    12781 agacgattgg tagattttat gcatttacaa ctttctgaca atcaaaaagg tcgttatcaa
    12841 gatgcttcgg gtgtgtatca ttacgttaaa aatgagttag caccgatcaa ctcacaagaa
    12901 tatttaatgc gtgaagcaca agaatatggg ttagcattgt ccaagcaaaa tatgattgag
    12961 acaggacaac ccgtacgcgc aaaaaggaat tggatggacc gtgtgaaagg gcatctgaag
    13021 cgtaaataat gaagcgtata aaaaaggggg gcttggacat ggtgttgtct aagccctcaa
    13081 atctgcctgt aattaattat tgtttaatat catcaatcgt caaagaaatc ggttgttgcg
    13141 tgatcggatg cgtcatttca atttgataac tttcaagctg taattgacgt aatttcgaat
    13201 cactatataa tggatccccc agtacaggat aaccaatttc agcgagatgc acacgaattt
    13261 ggtgtgtacg accagtatct aactttaaca tcacttcaca aacaccttct tcaatcattt
    13321 cagaagacaa aatatgtgtc actgcacgtt gaccggtagg agagacacga cgtttattcg
    13381 gatggaattt atccttgcca attggtaaat caatcgtttg tggcttaatt ggcaataaac
    13441 ttttcacttg tgctttataa atacgatgaa tgtcattatt ttccaacata cgatctaata
    13501 tttttttgat gatcggatgc ttcgccacaa taagtaagcc gactgtctct tggtcaagac
    13561 gatgaatagg ctcaacataa gggtggttca acgtataaat gacatggttc attaacgtat
    13621 tactttcttt taaatcattc ggatgtgttt tcacgccttt cggtttgtag acaatcgcta
    13681 aaaagtcgtc ttcataagcg atttgtgcat aacgatagct cggtaaatat tggcttttcg
    13741 cgtcttcatc aggaatgtat atttcgtcac ctgtatggac gatagtttgt aaatttgcag
    13801 cttcatcatt cactgtgata gattttgaca tattcaatgt atgcaactct tttttgggca
    13861 attgtaatgt tttaaatatg tcacgaatgg attgttcatt aaatgtatcg gcaactttaa
    13921 atttcataaa atcctcctta atttccttta tcataacaca aaacgaatcg tgattgatgg
    13981 ttttattcat tgaaacaacg tgtataataa agttaaatgt acatccatgc acgaataaaa
    14041 attggatgat tgatgtgtag caaagagtgg agtgacaata atggaaaaac caacaagatt
    14101 ggcgttatta aaggaaattg ccgaattcct taacgaagaa actgaattac aatccatgct
    14161 cgacggtgcg ttagactctt taattaaggg aagcgatttt acaacagggt ggatattttt
    14221 cattgatgaa gaaggccacc atacattaga gtcacagcac tcattacctt cagctttaac
    14281 caatcgccaa tgccattata tgaaagaagg gacatgttgg tgtgtccaag cataccataa
    14341 ccataaattg accaaagcct ctaatatcat taactgttcg cgcattaatt tagccagtcg
    14401 tgaatttgtg acagaaactg aagatattac ccatcatgcg acagtacctt tacgctctgg
    14461 taatgaacaa tttggactgt taaatgtcgc gacgccgttt acgacgcatt actcggatga
    14521 agacctcgaa ttgttagaat ctgttgcatt tcaaatcggt tctgcgataa aacggattga
    14581 cttgaacaat caagagaaag aagcggcacg aattaatgaa cgtaaccgct tagctcgaga
    14641 tttacacgat tcggttaatc aaatgttgtt ttctttaaaa ttaaccgcac atgcggcagg
    14701 tcaaatgacg caagaggaaa cgtcaaaacg tgcatttatg cagatagagc aaacgagtca
    14761 aaacgctgtg aatgaaatgc gtgcgttaat ttggcagtta aaaccggtag gcctcgaaaa
    14821 agggcttgtt catgcattaa aaaattacgc aagtcttata ggtctagata ttgatgtgac
    14881 ggtcaaagga ctcattgact tagaaaataa aattgagacc catctgtacc gtgtcatgca
    14941 agaagcaatg aataatacga aaaagcatgc gcaaacgaac catatggata ttgtgttgaa
    15001 ccaaacagac gactatctga ttgttgaatt gaaggataac ggtataggat ttgacgtgac
    15061 tcaagttgat tcggccgaaa aacacggatt gtcgaatatg cgacaacgga ttaaattttt
    15121 aaaaggaaca ataaaaatgg caagtgatca aggaacaaaa attacaatac aactaccact
    15181 tcaacagccc agggagggac aataatgcct aaaattgcac ttgtggatga tcattttata
    15241 gtaaggcaag gcttagaatt tttactttcg acacaaccac agatagaagt tgtaggaagc
    15301 tttggggaag gtcaagcact attagatgct ttagcaaccg atcaaatcga accagaactt
    15361 atccttgttg atttggttat gcctgaaatg aatgggatta cattaattca aaaattgaaa
    15421 gaacaacatg caggtattaa aatattagtg cttacaagtt atgtagatga agagcatgtc
    15481 atgtcagcga tgcaagcagg tgcagacggt tatgaaatga aggatgtcga tccggaagca
    15541 ttaatgacct ctattgaaac ggttttacaa ggagataaag tgattcataa agatgcgcaa
    15601 caggtgatgg atacagtcat aacgaagccg catatgctca ataaattgtc caaacgggaa
    15661 acagaagtgc tgaaagaaat ggcgaaaggg aagacgaata aagaaattgc tgaaacattg
    15721 ttcgtatcgg aaaagacgat taaaacgcat gtgagtcaca ttttctctaa attggaagtg
    15781 accgatcgta cacaagccgc gatttatgcc atggagaatc atttagtgta atgaaataac
    15841 attcacctaa aattaaaaag ttgtcgctaa ttttgttttt gtcaaatagc ttcaattgat
    15901 ctatctttca aaataagaca agtaaattaa aaaaccaaca tttcttaaaa tagcaaaaaa
    15961 cgttggtttt ttgtattcat ttattctacg tgcatattcc cttttaattt tcgtccttca
    16021 cgttcggata gaatcaatgc acatgcggca tcaccagtaa tgtttactgc tgtacgtgtc
    16081 atatctaaca aacggtcgat ccctaagata ataccgatag cggctggatt taaatcgact
    16141 gcagttaata ccatcgccaa catgatcagt cctacaccag ggacgcctgc tgttccgaca
    16201 gaagcaataa cagctacagc gacaacggta atgagctgta gaactgttaa atccgcacca
    16261 gataattgcg caatgaaaat tgtagcgaca ccttgcatga ttgcagtacc atccatatta
    16321 attgttgccc ctaaaggttg aacgaaagat gcaatttctg gtttgacacc catttttttc
    16381 gtacattcca ttgaaaccgg aagtgcagcg ttagaacttg agcccccgaa accaactgta
    16441 atcgctggga agaaaccttt gaaaaattca attgggctac gacccgctaa aaacttcact
    16501 gcaccgccat agacgacaaa gaaatgaata aagagtgcgg ctaatacaac aataaagtat
    16561 aaaccaagtt gtctgattgc accaaagcct gcgcctgtaa atgcatgtgc gacaagtcca
    16621 aatgtaccga ttggcgcaaa tacattcatt accattgata taatatacat caggacttca
    16681 ttaaactgtt cgaaaaattg atgtacaatc cttcctcgtt cgcctaccat cataataccg
    16741 ataccgacga aaatcgcaaa tgtaataatc tgaagcatat ttcctgttgt cattgattga
    16801 atcgcgtttt ttggaaagaa attaattaaa gtttgatcaa atgtctggtt gattggagaa
    16861 gccccagttg ccttttgatc atctaatttc ttttgatatg tggtaacttc ttctgatttt
    16921 aataagtctg aatggccagc acctggttta acgattaatg ctaaacacat cgctaacgtt
    16981 atcgcaatcg ctgttgtcga taagaaaaag acgagtgttt ttaagccgat gccgcctaat
    17041 aattttggat caccaacacc aattacaccg agtacaatcg acacgaatac aaccggtact
    17101 acgagcataa agattagatt taagaagatt tgaccaatga cattaaaaac atattgatcg
    17161 ataaatccaa caaatttaga ttcgacatag aaattgaaaa tcgaacctaa cgcaatccct
    17221 aagattaatg ctataataat tttcactgtt aacccttt
//
LOCUS       DANHPA010000053        17252 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.053, whole genome shotgun sequence.
ACCESSION   DANHPA010000053 DANHPA010000000
VERSION     DANHPA010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 17252)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17252)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17252
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.053"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            274..1068
                     /locus_tag="PTC28_001402"
     CDS             274..1068
                     /locus_tag="PTC28_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HDK5716687.1"
                     /translation="MLSESERHKIDQHLQQWIQQMTEEIPNLIHQIQTDTKSSRYDLV
                     TNVDQTIESRFEQFLKTYYPHHRLYGEEAHHETQHLKEGHTWLIDPIDGTANLVKQQD
                     DFCMIIGYFVEGEPQLSYIYDYPRQKLYRAVKGSGAFLNDKPLLPITSQPLKDQIISF
                     NNRVLNDETMHDLLDVSFGYRLIGACGLDSARVITGQFGAHIHTNAKPWDIAAQFLFA
                     QELGLKMTDFHQQPIDFVRGGPFIISNPGCYETILDILLSNGGYQK"
     gene            1196..2149
                     /locus_tag="PTC28_001403"
     CDS             1196..2149
                     /locus_tag="PTC28_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HDK5716688.1"
                     /translation="MEYKRTQKRKNPVLRFLLWFVGILFILAVIAVAYLAFKIFAVGG
                     AIHNPLDRNHSELRSGKVDLSKGEPFSIALFGIDSDAQRESAGGGERSDTIMILSVNP
                     EKKTTEMISIPRDTQAEIVGRDTTEKINHAYAYGGPDMAVKSIEKLMGVPIDHYATVN
                     MDGLKDTIDTVGGIDVTSNATFNAGGHQFTKGQRTHLDGDTAMSFIRSRKEEGAGGDF
                     GRQERQQLVLQGLADKLTGISSLTNFNALMNQLSDNVKTDLTIGELNQIRSNYSDAND
                     HVKRHQLDGSGGIQSDGLYYFIPDETQKQSLVQQYKQNLNL"
     gene            2379..3086
                     /locus_tag="PTC28_001404"
     CDS             2379..3086
                     /locus_tag="PTC28_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF969 domain-containing protein"
                     /protein_id="HDK5716689.1"
                     /translation="MEWLKLIGILIIVLGFYFKWDTIGTVLIAAIVTGLVSHMDVMTI
                     LETLGKAFVDNRMVSLFILTLPMVGMIERFGLKTQATRLINRIQGITSGRIMSVYLFI
                     REVAGLASIRIGGHPQFVRPLMNPMVQAAAKAKYKQKIEPVDEEKLKAHIAAMENYGN
                     FFGQNLFVGASGVLLIVATFHSLHMEVKAVEIALYSAPIAIVVLIVGVIQNVLFDRKM
                     NRKYAEKGGTQDESSND"
     gene            3067..3993
                     /locus_tag="PTC28_001405"
     CDS             3067..3993
                     /locus_tag="PTC28_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF979 domain-containing protein"
                     /protein_id="HDK5716690.1"
                     /translation="MSPQMISQILEIFYVLIGLQFVYTAYRVYREPSNMKRIGTAMFW
                     CILGLLFMVGPYFPNWLNGLLVLLMGFLTITKNVTIGKVVGVEHQEEEQGATRFGNLL
                     FIPAVVLAIVAVIVSTWTPLGGAIGISISSIVGLIVAYLIIRPKAKVGLYDSDRLVQQ
                     IGTVGILPQFLAALGILFTVSGVGTTISKGISSFLPQDNALLGVIAYILGMVLFTMLM
                     GNAFAAFTVITASIGLPFVIQNGGDPTIVGALAMTGGFCGTLLTPMAANFNTLPVALL
                     EMKDELAVIKAQAPMAIMLIVVHIILMYILAF"
     gene            4018..4659
                     /gene="pcp"
                     /locus_tag="PTC28_001406"
     CDS             4018..4659
                     /gene="pcp"
                     /locus_tag="PTC28_001406"
                     /EC_number="3.4.19.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyroglutamyl-peptidase I"
                     /protein_id="HDK5716691.1"
                     /translation="MKVLVTAFDPFAGEKVNPALQAVQRLPDTIEGHVIDKLEIPTVF
                     YQSIEVVREKLAETEYDIVLAIGQAGGRYEITPERVAINVDDARIPDNDGQQPIDQRI
                     QQDGPPAYFTPLPVKRMVEAMQAEGVPASLSNSAGTFVCNHIMYQLAYEAERYYPKLK
                     TGFIHVPFAPAQVIDKPGKPSMSIEMMVKGLTAAIRVCLNYDTDVATVHGTTH"
     gene            4856..7792
                     /gene="fdhF"
                     /locus_tag="PTC28_001407"
     CDS             4856..7792
                     /gene="fdhF"
                     /locus_tag="PTC28_001407"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HDK5716692.1"
                     /translation="MQEHLIVTLDGKDYLVEPGKNLLEFIKEQQTFVPSICYNESLGP
                     IQTCDTCAVEIDGKIERACGTTVQRSMVVNTTTQPVQDSQKEALDRILEKHQLYCTVC
                     DYNNGNCEIHNTMDQWGLEHQTYEYKPKPYEVDFGPFYRYDPNQCILCGRCVEVCQDV
                     QVNETLSIDWDREHPRVIWDNDVSINDSSCVGCGQCATVCPCNAMMENNMVGNAGYMT
                     DIEPGSLASMIDLTKKAETGYGPLFAVSDSEAAMREERIKKTKTVCTYCGVGCSFEVW
                     TKDREILKVQPSHDSPANKISSCVKGKFGWDYVNSEERLTKPLIRRGDQFEEVEWDEA
                     IKHVATRMQEIKAQYGPDALSFISSSKATNEESYLMQKLARQVIGTNNIDNCSRYCQA
                     PATKGLFRTVGHGGDSGSIEDIGKAEMVITIGTNTAEAHPVIASRIKRSHKLFGTKLH
                     VFDIRKHEMAQRADEFYQPYPGTDLVWLSAVTKYIIDQGWHAQSFIDEWVDHFDEYYQ
                     SLEPYTMDFAEEHTGISKERLIHLAKEIVSVNSVSICWAMGVTQQETGSDTSTAISNL
                     LLATGNYMKPGAGSYPLRGHNNVQGCSDFGSMPDKFPGYQGVEDDEARGRYEASWGVK
                     LPSHPGYDNHQMMDHIHAGDVHSLFILGEDTGIVDSNINYVQAALEKVDFLVVQDEFL
                     TFTAEYADVILPASPSLEKDGTFTNTERRFQRLYQVLEPLGDSKPDWQITQMIAKELG
                     FDWGYKHPAEIMDEASDLTPMFAGVKYHRLEGYNSLQWPVAADGTDSPLLFTERFNFD
                     NGKAKFFALDFNNFYKTNETYDLHVNNGRVLEHFHEGNMTYKVPGLKYKMPTAFVEVS
                     PELAKERGIHEGAAVKLISEHGEATMHVHITDRVSGKQIYLPLNDNSAAAINYLTSSV
                     TDPETHTPAYKSTSCRMEILSKRGKSPLNPTNFRNQTRNPQYSVRVDKKWARSDYVFP
                     GDQVMK"
     gene            7792..8259
                     /locus_tag="PTC28_001408"
     CDS             7792..8259
                     /locus_tag="PTC28_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1641 domain-containing protein"
                     /protein_id="HDK5716693.1"
                     /translation="MAERIRKIKRLEKSEAAIKAESLSQVTDAIAENKDSILKAIDLI
                     RTLDEAKILDALNGAVKQRGVITEKITAELNKDQYTGVIHNMGQMLFLLGDLQTDELR
                     VLLNKVNRGIRVANQASPHARTSVTGLMRVLKDDEMNQSLTYFLNLLKGMSRD"
     gene            9014..9256
                     /locus_tag="PTC28_001409"
     CDS             9014..9256
                     /locus_tag="PTC28_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716694.1"
                     /translation="MDTKKIKILGIISNVFLILGLILLVFVSAWIALVCFLISLGLSL
                     VLFNMLFHGKRVVKIIVNIAYFVVLCAVGVMIYMSR"
     gene            9284..10062
                     /locus_tag="PTC28_001410"
                     /pseudo
     CDS             9284..10062
                     /locus_tag="PTC28_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729543.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosaminidase"
     gene            10082..11209
                     /locus_tag="PTC28_001411"
     CDS             10082..11209
                     /locus_tag="PTC28_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HDK5716695.1"
                     /translation="MKIGIVGAGIGGLTAAIMLRAQGHDISIYEKQDTISEVGAGIGI
                     GDNVIQMLGEHDLAKGIKNAGQVLTAMRIFDEQGHILNTLPLSDKNTNVTLERQTLVD
                     LLKSYLDDELFHFNHKVTHVESNGTTGTIHFKEQSAVQVDMIIGADGIRSQVRQSVQP
                     KNKVQYQGYTCFRGIVDDMDMLKPIADEYWGQKGRFGIVPLLDGRAYWFATMNAKEND
                     MHFKKFNKPYLQAYFNHFPEPVRKVLDLQAETAILHHDIYDLKSLSTFVYEKNIVLLG
                     DAAHATTPNMGQGAGQSMEDAIVLSNVLKKYDTLESALKRYNRLRVKHTRQITKRSRQ
                     IGKVAQKANGLSIKMRNRFMRLLPRWVMKRQTQLLYRTKSE"
     gene            complement(11410..12372)
                     /locus_tag="PTC28_001412"
     CDS             complement(11410..12372)
                     /locus_tag="PTC28_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase family protein"
                     /protein_id="HDK5716696.1"
                     /translation="MKKVFIAGPIPEKGLEILKAHFEVEMYEGEGIIDKETLKTGVKD
                     AFGLVSLLSTEVDQEVIDSGSNLQFIANYGAGFNNVDVDYARSKNIDVSNTPKASTNS
                     TAELTMAILLAAARRVAEGDRLMRNEGFNGWAPLFFRGREVSGKKLGIIGLGEIGTAV
                     ARRAKGFDMDILYTGPHQKPDKERELGAKYLDLDTLLQTADFVAINAAYQPSMRHMID
                     TPQLEMMKPTSYLINASRGPIVHEAALLEALQNKTIEGAALDVYEFEPKITEGLKSLD
                     NVVITPHIGNATFEARDMMAEIVANNLVKKANGETPDFIVNLPK"
     gene            complement(12436..12750)
                     /locus_tag="PTC28_001413"
     CDS             complement(12436..12750)
                     /locus_tag="PTC28_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QacE family quaternary ammonium compound efflux
                     SMR transporter"
                     /protein_id="HDK5716697.1"
                     /translation="MSWFALLLAGLFEVLGVLWLNEYARQHQKRFIVLLAITFALSLA
                     SLSWAMADIPMGTAYAIWTGIGTAGGTILGMVVYHESKQFIRIFFIFLIIISAVGLKL
                     IV"
     gene            complement(12747..13073)
                     /locus_tag="PTC28_001414"
     CDS             complement(12747..13073)
                     /locus_tag="PTC28_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDK5716698.1"
                     /translation="MQWTKVIFAGLMEVVWVIGLTHSHLLYQWILTIALISLSFWMMV
                     SASRILPVGTVYAVFVGIGTLGTVIVGMLFFNESVSFIKLCFILTLLIGVIGLKLTTD
                     QAGEQQ"
     gene            complement(13384..13962)
                     /locus_tag="PTC28_001415"
     CDS             complement(13384..13962)
                     /locus_tag="PTC28_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HDK5716699.1"
                     /translation="MLKKFATTTTLTAGLGAAAAVGLQHDNADAAEGNYSYSYSYNYG
                     YNTNAQGNTNYNYNANSNQTYTYGQNTTSISTSTQSTGVTSAGNLYTPGQCTWYVYDK
                     VGGEIGSTWGNANNWASSASAAGFTVDNNPEEGSILQSNAGPMGHVAYVESVNEDGSI
                     TVSEMNYDGGPFNISTRTISASEASSYNYIHV"
     gene            14633..15709
                     /locus_tag="PTC28_001416"
     CDS             14633..15709
                     /locus_tag="PTC28_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD/NADP octopine/nopaline dehydrogenase family
                     protein"
                     /protein_id="HDK5716700.1"
                     /translation="MKIAIVGSGNGAVTAAVDMMNQGHHVKLYCRNQSISKFDYAIEQ
                     GGFNFNNEGTESFVPFTNISDDMGYVLEGAEIVMLCIPSSFIEYYAELMSSHINNDQI
                     IFFNMAAAMGSARFIKVLEEYKIETRPIFAEANTLTYGTRVNFETASVDLSLNVRKVY
                     FSTLNEKDLTKTFKKVESLYPYIVKEESLWRTNLENGNPEVHPGPTLLNVGRIDYSGD
                     FALYKEGITNHTVRLLHAVEVERLTLGRKLGFELETAKEARIARGYLEREMEDEPLNK
                     LFNHSPVFSRIPGPNKVNNRYLTEDIAYGLVLWSSLGREIGVPTPNIDAIIVIASTIL
                     ERDFFNEGLTIEYLGRENVGLASY"
     gene            15735..17132
                     /gene="nhaC"
                     /locus_tag="PTC28_001417"
     CDS             15735..17132
                     /gene="nhaC"
                     /locus_tag="PTC28_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HDK5716701.1"
                     /translation="MKRKPTLLESLSTIFVMMIVVCVGFIFFEIPVQPLLIISAAYAS
                     WIAWRVGLRWKDLEEGITDRLATAMPAIFIILTVGIIVGSWMYSGTVPALIYYGLKFL
                     SPSYFLISAFLISAITSVATGTAWGSASTAGIALMAIGLHMDIPAGMAAGAIISGAVF
                     GDKMSPLSDTTNLASLVTRVNIFSHIKHMIWTTVPASMIGLIVWHIASRRFSVQTNTE
                     QIDALLKDIATMYDINFFIWLPLIVIVVCLLAKISTVPSMLISSVVAIFVGWLNNGFQ
                     LKNGFIATFSGFTPKMLLGQEGLSQKALSLIEQGGMMSMTQVLVTIFCGYAFAGIVEK
                     AGCLDVILHSISKNINSRGQLILVTVIGSLMMVLAAGVASVVIIMVGVLLMQMYDKMD
                     LDRVNLSRTLEDSGTMIIPLIPWGTSGIYYTQQLGVGVGQFFIWAVPCYLCVLFALFY
                     GFTGIGIKKKASASL"
BASE COUNT         5375 a         2956 c         3700 g         5221 t
ORIGIN      
        1 agggggatgg tacaagaaat gttcaaataa agggggagct atcactattg atagtaatgt
       61 ttgaatggta tattgtacta attctagttt aacatcttca atatttatta cttactttcc
      121 tttctatgcc ggttggttca cgccaaccgg ttttttcgcg tatcaatcag atgttgtatg
      181 ccatgatgat ttcaatacgt atcttttgaa gaacccccaa aaactctttt tcttctgtat
      241 aatggaacta acatagataa agaggtgata catatgttat ctgaatcaga gcgtcataaa
      301 atagatcaac atctccaaca atggattcaa cagatgacag aagaaatccc taatctgatt
      361 catcaaattc aaaccgacac gaaatccagt cgttacgatc ttgtaacgaa tgttgatcaa
      421 acgatcgaat caagatttga acaattttta aaaacgtatt atccacacca ccgcttgtat
      481 ggagaagaag cacatcatga aacgcagcat ttaaaagagg gacatacgtg gttgattgat
      541 ccgatagatg ggacagcaaa tttagtcaaa caacaagatg acttttgcat gattataggc
      601 tattttgttg aaggggagcc acaactttcc tatatctatg attatccaag acaaaaactg
      661 tatcgcgctg tgaaaggaag cggtgcattt ttaaatgaca agccgttgct tcccatcaca
      721 tcacaaccgt tgaaagatca gattatttca tttaacaatc gtgtattgaa tgatgaaacg
      781 atgcatgact tattagatgt atcatttggc taccgtttaa tcggtgcttg tggccttgat
      841 tcagcacgtg taattacagg gcagttcggt gcacatattc atacgaatgc gaaaccttgg
      901 gacatcgccg ctcaattttt atttgcacaa gaacttggtt taaagatgac agacttccac
      961 caacagccca tcgattttgt tcgtggtggt ccatttatta ttagtaatcc agggtgttac
     1021 gaaacaattt tagacatatt gttatctaat ggtggatatc aaaagtagac ttgcgtctaa
     1081 agaccgattt cgttcgataa actttactgt aaaataacac ttaatatgtg acgggatcat
     1141 attttcatgt atctccataa agcttgacca atacattcgg aaagaagtga ctttgttgga
     1201 gtataaaaga acgcaaaaac gtaaaaaccc agtattaaga tttttattat ggtttgtagg
     1261 tattttattc attttagccg ttattgctgt agcttatctg gcatttaaaa tttttgcagt
     1321 agggggggcc attcataatc ctttagatag aaatcattca gaattgagat caggtaaggt
     1381 ggatttgagt aagggagaac ctttttctat tgcattattt ggtatagatt cagatgcgca
     1441 acgtgaaagt gcgggaggcg gtgaacgaag cgataccatt atgattttat cagtgaatcc
     1501 agaaaagaaa acgacagaaa tgatcagtat tcctcgtgat acacaagcgg aaattgttgg
     1561 acgtgataca acagaaaaaa tcaaccacgc ctatgcctat ggtggaccag atatggcagt
     1621 gaaatctatt gaaaaattaa tgggtgtgcc aatcgatcat tatgcaacag ttaatatgga
     1681 tggtttgaaa gatacaatcg atacggtcgg cggcatcgat gtgacaagta atgcgacatt
     1741 taatgcaggg gggcatcaat tcactaaagg tcaacgtacg catcttgatg gtgataccgc
     1801 catgtcattt attcgaagcc gtaaagaaga aggggcaggt ggagatttcg gtagacaaga
     1861 aagacaacaa cttgtgcttc aaggtttagc tgacaagtta acaggtattt cttcgcttac
     1921 gaattttaat gccttgatga accaattgag tgacaacgta aagacagatt taacgattgg
     1981 tgaactgaac caaattcgta gtaactacag tgatgctaat gatcatgtta agcgtcatca
     2041 attagacggt tctggtggta ttcaaagcga tggtctttat tacttcattc ccgacgaaac
     2101 acaaaagcaa tcactagtac agcagtataa gcaaaattta aacttataaa tgtactgttg
     2161 atttgaaagc agcctttgaa ccatcaccca tacaattgaa tcgcggagtg gagttcaata
     2221 ggttcaatta ttaatatgcc ttgcaatgta taacgttaac cgcgtacaca ttgtagggca
     2281 tttttaattc tttagggaga tagctttccg atgcttattt gaaacaatat tcagataacg
     2341 ataaaataaa gtgactatct acataaagga ggaatttgat ggaatggctt aaactgatag
     2401 gcatcctcat catcgtttta ggtttttatt ttaaatggga cacgattggt acagtactta
     2461 ttgcagcaat tgtgactggc cttgtttctc atatggatgt gatgacgatt ctagaaacac
     2521 ttggtaaagc atttgtggat aatcggatgg tgtcattatt tattttaacg ttgcctatgg
     2581 tcgggatgat tgaaaggttt ggtttaaaaa cacaagcgac acggttaatc aatcgtatcc
     2641 aaggtatcac ttcggggcgg atcatgtccg tttacttatt cattcgtgaa gttgcaggcc
     2701 ttgcttcaat tcgaattggt ggacatccac aatttgtacg tccgctcatg aatccaatgg
     2761 tccaagcagc ggcgaaagcg aaatataaac aaaaaataga gcctgtagac gaagaaaaac
     2821 tgaaagccca tattgctgca atggaaaatt atggcaactt tttcgggcaa aatttatttg
     2881 tcggcgcatc aggtgtactg ttgattgttg caacgtttca ttcattacat atggaagtaa
     2941 aggccgtcga gattgcgtta tattctgccc ctatcgcgat tgttgtgctg attgttggtg
     3001 tgattcaaaa tgtcttgttt gatcgaaaaa tgaaccgtaa gtatgctgag aaagggggga
     3061 cacaagatga gtcctcaaat gattagtcaa attctagaaa tcttctatgt gcttatcggt
     3121 ttacagtttg tttatacagc ttatcgtgtg tatcgtgaac cgagcaatat gaaaagaatc
     3181 gggacagcaa tgttttggtg tattttaggt ttattattta tggtaggacc ttattttccg
     3241 aattggctca atggtctgct cgtattgtta atgggttttt taacgataac gaaaaatgta
     3301 acaatcggga aagtggttgg ggtcgagcat caagaagaag aacaaggggc gactcgcttt
     3361 ggaaatttat tatttatccc agctgtcgtg ttagcgattg ttgctgtcat tgtgtcgact
     3421 tggacgccat taggtggtgc aatagggata agtatttctt ctattgtcgg actgattgtt
     3481 gcgtacttga ttatccgtcc gaaagcgaaa gtcggcttat atgatagtga tcgtttagtg
     3541 caacaaattg ggacagtcgg cattcttcca caatttttag cagcacttgg tattttgttt
     3601 acagtgagtg gggtagggac gacgatttca aaagggatat cgagcttttt acctcaagat
     3661 aatgccttac tcggtgtgat cgcgtacatt ttaggcatgg tgctctttac gatgttaatg
     3721 gggaatgcat ttgcagcgtt tacagtcatc accgcgagca ttggcttacc gtttgtgatt
     3781 caaaacgggg gtgacccaac gattgtcggt gcattggcga tgacgggcgg tttttgtgga
     3841 accttactta ctcctatggc tgcaaacttc aatacgttac ctgttgcatt attagaaatg
     3901 aaagacgaat tagctgtgat taaagcacaa gctccaatgg ctataatgct catcgtcgtg
     3961 catatcattt tgatgtatat actggctttt taaatgaata aaggaggttt taagtcaatg
     4021 aaagttttag tcactgcatt tgatccattc gctggtgaaa aggtgaatcc agcattgcaa
     4081 gcggtacaac ggttacctga taccattgaa ggacacgtta ttgataagtt agaaattccg
     4141 accgtgtttt accaaagtat tgaagtcgtt cgagaaaagc ttgcggaaac agagtatgac
     4201 attgtgcttg ctataggaca ggcgggtggg cgctatgaaa tcacaccaga acgcgtcgcc
     4261 attaacgttg atgatgcacg tattccggat aatgatggac aacaaccgat tgatcagcgc
     4321 attcaacaag atgggccgcc agcgtatttc acgccattac ctgtaaaacg tatggttgaa
     4381 gcgatgcaag ctgaaggtgt gcctgcaagt ctatcgaata gtgccggtac atttgtgtgt
     4441 aatcatatta tgtaccaact tgcctatgaa gcagaacgat attatccaaa gttgaaaaca
     4501 ggatttatac acgtgccatt tgcgcctgca caagtgattg ataagccggg aaaaccatcg
     4561 atgtcgatag agatgatggt aaaaggatta acagctgcga ttcgcgtgtg tctcaactat
     4621 gatacagatg ttgcaacagt tcacggcacg acgcattaaa gtttgaaata tattgcacat
     4681 gtctgcactt tagaagcgtt tagaaattat tttagtattt ttaaaatgag tttgcgatat
     4741 ataacttttg gaaatgtgtt aacttttggt tactaaaggt ataaaatgga aataactaag
     4801 tatgtggggg catcttaggc atataaaata aacaatcatt tcagggggga tattgatgca
     4861 agaacatctt attgtaactt tagatggtaa agattatctt gtagaaccgg gcaaaaatct
     4921 gcttgaattc ataaaagagc aacaaacgtt tgtaccctca atttgttata acgaatcact
     4981 aggaccaatt caaacatgtg atacgtgtgc cgttgaaatt gacggcaaaa tcgaacgtgc
     5041 atgtgggacg acggtacaac gctcaatggt tgtgaacacg acaacacaac cggtacaaga
     5101 tagccaaaag gaagcattag atcgcatttt agaaaaacac caactttatt gtacagtttg
     5161 tgattacaat aacggtaact gtgagattca taatacgatg gaccaatggg gattggaaca
     5221 tcaaacgtat gaatataaac cgaaacctta tgaagtggat tttggtccat tttatcgtta
     5281 tgatccgaat caatgtattt tatgtggacg ttgtgtcgaa gtgtgtcaag acgttcaagt
     5341 gaatgaaacg ttgtccattg actgggatcg tgaacatcca cgtgtcattt gggataacga
     5401 tgtctcaatt aatgactctt catgtgtcgg ctgtggtcaa tgtgcaacag tgtgtccatg
     5461 taatgcaatg atggagaaca acatggtcgg taatgcaggc tacatgacag atattgagcc
     5521 aggttcactg gcttcgatga tcgatttaac gaagaaagca gaaacaggct atggtccttt
     5581 gtttgcagtg tctgattccg aagcggctat gcgtgaagaa cgtattaaaa agacgaaaac
     5641 ggtatgtaca tattgtggtg ttggttgtag cttcgaagta tggacgaaag accgtgaaat
     5701 cttaaaagta caaccttctc atgattcacc ggcaaacaaa atttcttcat gtgtgaaagg
     5761 gaaattcggt tgggattacg tcaattcaga agagcgttta acgaaaccat taatccgccg
     5821 tggtgatcaa tttgaagaag tcgaatggga tgaagcgatt aaacatgtcg caacacgtat
     5881 gcaagaaatt aaagcgcaat acggtccaga tgcattgtca ttcatttcat cttcaaaagc
     5941 gacaaatgaa gaatcctact taatgcaaaa acttgcacgc caagtgatcg gtacgaacaa
     6001 tatcgacaac tgttcaagat attgccaagc accagcgaca aaaggtttat tccgcacggt
     6061 cggtcatggt ggggattcag gttcaattga agatatcggt aaagcagaaa tggttattac
     6121 gatcggtacg aatacagcag aagcacatcc tgttatcgca tctcgtatta aacgttcaca
     6181 caaattattc ggtaccaaat tgcatgtatt cgacattcgt aaacatgaaa tggcacaacg
     6241 cgcagatgaa ttttaccaac cttatccagg tacggactta gtatggttat ctgctgtgac
     6301 taaatacatc attgatcaag gatggcatgc acagtcattt attgatgaat gggtcgacca
     6361 ttttgatgaa tactatcaat cactcgaacc gtatacaatg gactttgcag aagaacatac
     6421 aggcatttca aaagagcgcc tcatccacct tgccaaagaa attgtgagtg ttaattcagt
     6481 ttcaatttgt tgggcgatgg gtgtgacaca acaagaaaca ggttcagata caagtacagc
     6541 gatttctaac ttgttattag caacaggtaa ctacatgaaa ccaggcgcag gttcttatcc
     6601 attgcgtggt cataataacg ttcaaggctg ttctgacttt ggtagtatgc cggataaatt
     6661 ccctggttac caaggtgttg aagatgatga agcgcgtggc cgttatgaag caagttgggg
     6721 tgtgaaatta ccaagtcatc caggttacga caaccaccaa atgatggatc atattcatgc
     6781 aggtgacgta cacagtttat tcattttagg ggaagatacc ggcattgtgg actcaaacat
     6841 taactatgtt caagctgcac ttgaaaaagt agacttcctt gtcgtccaag atgaattttt
     6901 aacatttaca gctgaatatg cagacgtgat tttacctgca agcccgtcat tagaaaaaga
     6961 tggtacattc acaaacactg aacgtcgttt ccaacgttta tatcaagtgt tagaaccgct
     7021 tggtgactct aaaccagact ggcaaatcac acaaatgatt gcgaaagaac ttggttttga
     7081 ttggggttac aaacacccag ctgaaattat ggatgaagca tcagacttaa cacctatgtt
     7141 tgctggcgtg aaatatcatc gtttagaagg ttataacagc ttacaatggc cagtcgctgc
     7201 agatggtacc gattcaccat tattgtttac tgaacgtttt aactttgata atggtaaggc
     7261 gaaattcttt gcactagatt tcaataactt ctataaaaca aatgaaacat acgacttaca
     7321 tgtgaataat ggacgtgtcc tcgaacattt ccatgaaggt aacatgacat acaaagtacc
     7381 aggattaaaa tacaaaatgc cgactgcgtt tgttgaagta tcgccagaat tggcaaaaga
     7441 acgtggtatc catgaagggg cagcagttaa attaatttct gaacatggtg aagcgacaat
     7501 gcacgtgcac attacagatc gcgtgtccgg taaacaaatt tatttaccgt tgaatgacaa
     7561 cagtgcagca gcgattaact atttaacaag tagtgtgaca gacccagaaa cacatactcc
     7621 ggcttataaa tctacaagct gtcgtatgga aatcttgagt aaacgcggaa aatcaccgct
     7681 taatccaacc aactttcgta atcaaacaag aaatccacag tacagcgtac gtgttgacaa
     7741 aaaatgggca agatcggatt atgtcttccc aggggatcag gtgatgaaat aatggctgaa
     7801 cgtattagaa aaattaaacg tcttgaaaaa agtgaagcag caatcaaagc agaaagttta
     7861 tcacaagtta cggatgccat tgcggaaaac aaagatagta tcttaaaagc cattgacctt
     7921 attcgtacat tagatgaggc taaaatatta gatgcattaa atggtgccgt gaaacaacgt
     7981 ggtgtcatta cagaaaaaat taccgctgaa ttgaataaag atcaatatac aggtgtcatt
     8041 cataatatgg gccaaatgtt gttcttatta ggtgatttgc agactgatga actgcgcgta
     8101 ttgttgaata aagtgaatcg cggtattcgt gtagcaaatc aggcgagtcc tcatgcacgt
     8161 acttctgtga caggtttgat gcgtgtgttg aaggatgatg agatgaatca aagtttgact
     8221 tactttttga atttgttgaa ggggatgtct cgcgattagt ttttggacat ttcggagtgg
     8281 agtggcagtt gatgtcattc cactttttgt tttgtgcagt tttagtacat ttcaagaaca
     8341 ttggatagta cgtatctttc agattgctgt gaacgattct gcatgaatgg ttgtttgact
     8401 gattgaatgg acgctatggt ctcgcgttct taggggcctt gcctcaactc aattcggctt
     8461 gattgaagtg aacatttgat gggtgccgaa ttggattttg ggagcagtac agaaatctca
     8521 tgtgcaacaa agatttcgtc gtactgcccc cgcaaggctg actagacttc tcaaaagcgt
     8581 atgcattgag aagtcagaca gctactgcgt taaacggtag ccacttttaa agttaaatga
     8641 cgttgtttag cctttaactg atccctcaag cgtctcggcc agcgttacaa atcaatcagt
     8701 taattttgat taaatgtgca gcatcgttca tgcaacctta gaaagagagc gattgataaa
     8761 atgtgacatc catcacaagg ataaaaagta agagagaaaa caatactctg aaatatgcat
     8821 ttcttcaaaa atgaatcggt gctattcttc taaaaaaggg tgtgggatgg gtatgcattt
     8881 tcagtttaca taaagtttta aagctcgctc tacgtgtatc aggtcgtttt atgcaacgta
     8941 ctaagaatga atgctgtgtc gcgatgatgt tcgtttcatg ataaaataat acaggtatga
     9001 aagaggtggg aaaatggata caaaaaagat taaaatatta ggtattattt ccaatgtatt
     9061 tttaattttg ggattgattt tacttgtttt tgtcagtgca tggattgcgc tcgtttgctt
     9121 tttaatttcg ttaggtttga gtctcgtgtt attcaatatg ctttttcacg gtaagcgtgt
     9181 ggtaaaaatt attgttaata tcgcgtattt tgtagtttta tgtgctgtag gtgtgatgat
     9241 ttatatgtcg aggtaacatc aatcatgtaa aggagtctat gagatgaatc ggtcgcgtaa
     9301 agtgaaacct ttgaaagcta ttattattgt attatttgtg ttatttgtcg ttttatttgt
     9361 ggtcaatgaa acgtctcttt ttaaaaatga taaaacacat acatttgatg aagcttttgc
     9421 caaacaaatg caaggggatg cgttacatac aaaatctaaa ggtaaccagt ttgtcaatgc
     9481 ttctaagcaa gacatcaaag ctgcgatgac tgttgaccac aaagattcag atttgatgta
     9541 tatggattta tctgaaccga ttgaaatgtc ggaagatgaa gtgaatgaca tgttaaaggg
     9601 gaacggcatt ttagaagggc atgggaaagc ttttttagag gcacaaaagg aaaatgatgt
     9661 caatgtcatt tatttagtga gccatgcgca gttagaaaca ggagaaggtc ggtctgcttt
     9721 ggcgaaaggt ttacgcaaag gtgacgctcg ttattacaat tttttggtat cggtgcgttt
     9781 gatcgtaaag ctgtcaaaac aggcgcaagt tatgctcaaa aagcgggatg gacttcacct
     9841 gataaagcga ttaaaggtgg tgcgtctttt gtaagaacgc aatattttga aaatggccag
     9901 ctcaacttgt atcaaatgcg atggaatccg caaaaccctg cgacgaatca gtatgcgagc
     9961 gacatcgatt ggccggctaa aattgctgca cgtatggaag tttactacca aaaatatggt
    10021 attaaaaaag atgatattcg aaaagatttt tacaagaaat gatcaatgac ggggtgatga
    10081 tatgaaaatc ggcattgtgg gtgcaggcat tggtggtctt acagctgcaa taatgcttcg
    10141 agcacaagga cacgatatct caatttatga aaagcaagac actattagtg aggtaggtgc
    10201 gggcattggt attggagaca atgtgattca aatgctcggc gaacatgatc tcgctaaagg
    10261 aatcaaaaat gccggtcaag tcttgacagc gatgcgtatt tttgacgagc aaggccacat
    10321 attaaataca ttgccattaa gcgataaaaa cacgaatgta acgttagaac gtcaaacatt
    10381 agtggacctt ttaaaatcct atttagatga tgaattgttt cattttaacc acaaagtgac
    10441 gcatgtcgaa agtaatggga ctactgggac gattcatttt aaagagcaaa gtgcagtaca
    10501 agtcgatatg attattggtg ctgatgggat tcgttcacaa gtgagacaat ctgttcaacc
    10561 taaaaataaa gttcaatatc aaggatatac atgctttaga ggaatagttg acgatatgga
    10621 catgttaaaa ccgatagccg atgaatattg gggacaaaaa ggacgtttcg gcattgttcc
    10681 attattagat ggtcgggcat attggtttgc gacgatgaat gcgaaagaga atgatatgca
    10741 ctttaaaaag tttaataaac cttatttaca agcgtatttt aatcattttc cagaaccagt
    10801 gcgtaaagta ttagatttac aagctgaaac tgcgattttg catcatgata tttatgattt
    10861 gaagtcattg tcgacatttg tgtatgaaaa gaatatcgtg ctattaggtg atgcagcaca
    10921 tgcgacaaca ccgaatatgg gtcaaggtgc aggtcaatcg atggaagatg cgatcgtttt
    10981 atcaaatgtg ttgaaaaaat atgacacgct cgaaagtgca ctgaaacgct acaatcgatt
    11041 acgtgtgaaa catacccgac aaatcacgaa gcgttcgcgt caaattggaa aagtggcgca
    11101 aaaagcgaat ggacttagta ttaaaatgcg aaatcgattc atgcgattgt tgccaagatg
    11161 ggtcatgaaa cgacaaacac aacttttata tcgtacgaaa agtgaataat aaaagtaaaa
    11221 acagagactt ggagattatg ttttctcagt ctctgtttct gtttctattt tttaaattga
    11281 tatcgattaa gtcgtcgaaa attaagaatg aattgggaga agggacatag aaaaatttta
    11341 cgtacgcccc atctcactcc tttattttac atgtagttca atagataaag gcaaggggtg
    11401 tggcatcgat tattttggca agttaacgat aaaatcaggt gtttccccat tagctttttt
    11461 aactaagtta ttcgcaacga tttctgccat catatcacgt gcttcaaatg ttgcattacc
    11521 gatatgcggt gtaatgacca cattatctaa tgatttgaga ccttccgtaa tttttggctc
    11581 aaattcataa acgtcaagtg cagccccttc aatcgttttg ttttggaggg cttctaataa
    11641 tgctgcttca tgcacgatag gtccgcgaga agcgttaatc agataacttg ttggtttcat
    11701 catttctagc tgaggtgtat ctatcatatg acgcatagac ggttgatatg cagcgttaat
    11761 agcaacaaaa tctgctgttt gaagtaacgt gtctaaatct aaatatttcg cgcctaattc
    11821 acgttctttg tctggttttt ggtgtggccc tgtgtaaaga atatccatat caaatccttt
    11881 cgcacgacgc gcaacggctg taccaatttc acctaagccg ataataccta attttttacc
    11941 agatacttca cgaccacgga aaaataacgg tgcccaccca ttgaagcctt cattacgcat
    12001 tagacgatca ccttctgcaa cgcgacgtgc tgcagcaagt aaaatcgcca tcgttaattc
    12061 agccgttgaa tttgtagagg ctttaggtgt gtttgaaaca tcaatatttt ttgaacgtgc
    12121 ataatcgaca tcgacattat tgaaacctgc accataattg gcgataaatt gtaaatttga
    12181 accactatca atcacttctt ggtccacttc tgtagataat aaactgacga gtccgaaagc
    12241 gtctttaacg ccagttttaa gcgtttcttt atcaataatt ccttcacctt cgtacatctc
    12301 aacttcaaaa tgagctttta atatttcaag tcctttttct gggataggac ctgcaataaa
    12361 tacttttttc atatgcgatt cccacctttc ttctctagta tatgaaaccc ctttctagat
    12421 tacaagaaat gccggttata caattaattt caatccaact gcagaaatga taatcaagaa
    12481 aatgaaaaag attcttataa attgtttgga ttcatgataa acgaccattc ctaaaatcgt
    12541 accacctgct gtgccgattc ctgtccaaat ggcataagcg gttcccattg gtatgtctgc
    12601 cattgcccaa gaaagactgg ctaagctcaa agcaaaggtg atagcaagta atacaataaa
    12661 acgtttttga tgttggcgtg catattcgtt taaccaaagc acgcctaata cttcaaataa
    12721 gcctgctaat aaaagtgcga accaactcat tgctgttcac ctgcctgatc tgttgttaat
    12781 ttgagaccga taacgccgat aagtaatgtg aggatgaagc acagtttgat gaaactcact
    12841 gactcattga aaaacagcat gccgacaatg actgtgccta acgtgccaat accgacgaat
    12901 acagcatata ctgtgcctac aggtaagatg cgtgaagcag ataccatcat ccaaaaactt
    12961 aaactgatca gcgcaatggt caatatccat tggtaaagga gatgagaatg cgttaagcca
    13021 ataacccaga ccacttccat taaaccagcg aaaatcactt tcgtccattg catgtgaaat
    13081 gcctccttga aatcatataa tgccatcata taatgaatat tcatttgtcg gcaagatgag
    13141 ccatacaaat ttttgatgca atatttttgt tgaactcgtc ctattcctaa gatttctgcg
    13201 tttgattgcc ctacccataa catccaattt ttacgtctag ttgatcctca ttttttgccg
    13261 ctgttatgat taataagata ggggggtgga aaactcaatg ttctaatcct atatacacaa
    13321 taaaaaacca ttgctgtatg ctgtaacaac aatggttttt taaatttaat gattcatgtc
    13381 atcctatacg tgaatgtagt tgtatgaact agcttcagat gcagagattg tacgtgtact
    13441 tatgttgaat ggaccgccgt catagttcat ttctgatact gtaattgaac catcttcatt
    13501 gacagattca acgtatgcta cgtgccccat aggacctgca tttgattgta agattgaacc
    13561 ttcttcaggg ttgttgtcta cagtgaaacc tgcagctgat gctgagcttg cccagttgtt
    13621 tgcgttaccc caagttgaac caatttcacc gccaactttg tcatatacat accaagtaca
    13681 ttgaccaggt gtatataagt ttccagcact tgttacgcca gttgattgtg ttgaagtaga
    13741 tatgcttgtt gtattttgac cgtatgtgta tgtttggttg ctgtttgcat tgtagttgta
    13801 gtttgtatta ccttgtgcat ttgtgttgta accgtagttg tagctgtatg aatagctgta
    13861 attaccttca gcagcgtcag cgttatcgtg ttgtaagccc accgcagcgg cagcacctaa
    13921 tccagcagtt aatgtagttg tagtagcgaa tttttttaac ataataaaag tcctcctaaa
    13981 gtttttggtt gtttatttta atttgagaat tgtaaaagtt ggtttgttta attaaatcgt
    14041 tcttttaacg acaatatgaa ctttatcaaa aattgagccg tctgtgtgga atgttacagt
    14101 tttgtaattg aattaaaact cgaatgggat acgatgtaat ctcatgacag cgacactttt
    14161 ccttatcaaa tgtagattta acgcgctatt tagttttgtt tttaaacctt ttatcattca
    14221 agatgttaca gtgaatgtaa tatttagagc aatgacttaa tttgttttag actttaaaaa
    14281 tgcaacgtca ttaatttgaa aaaatgaact aaaacgaaac gtacaaaaat gaattgtttt
    14341 atatcaagag ttaattgaag gtgttgaaaa agttcgatta aagtaaatgc tacatgggaa
    14401 gcaggctatg aggatgggca acgagcagtc tatcaatatg tgtagcacta aaataaaaaa
    14461 attagcaaca taattgtgcg cataaagggt ataactaagc aacaacgcga tgagaatgca
    14521 acgatattca aaaaattgtt ttcttttgat aatcgttctg ttacgattca tgttgagtca
    14581 caattcgatg acacgacatc aaacagaaaa aaacagaaag aagggtaaat aaatgaaaat
    14641 agcaattgta ggatcaggta acggggcagt gacagcagcg gttgatatga tgaatcaagg
    14701 gcatcacgtc aaactgtatt gtcgtaacca atccatcagt aaatttgatt atgccattga
    14761 acaaggtggt tttaatttta ataatgaggg cacagaaagt tttgtaccgt tcacaaatat
    14821 tagtgacgac atgggctatg tcttagaggg tgctgaaatt gttatgttat gtatcccttc
    14881 gtcatttatc gaatattatg cggaattaat gtcatcgcat attaataatg atcaaattat
    14941 tttctttaat atggcagcag caatggggtc agcacgtttt attaaggttt tagaagaata
    15001 caaaatagag acacgtccca tctttgcaga agcgaacaca ttaacgtatg ggacacgcgt
    15061 caactttgaa acagcttcag tcgatttatc attaaatgta cgaaaagttt atttctctac
    15121 attaaatgaa aaggatttaa caaaaacctt taaaaaagtg gaatcgctct atccatatat
    15181 tgttaaagaa gaaagtttat ggcgtacaaa cttagaaaac ggtaatccag aagtacatcc
    15241 tggaccaacg ttattgaatg tgggacgtat tgattacagt ggagattttg cgctttataa
    15301 agaaggaatt acaaatcata cggtgcgctt gttacatgca gtcgaagtcg agcgtttaac
    15361 gttaggacgt aagttaggtt ttgaattgga aacggcgaaa gaagcccgta ttgcacgtgg
    15421 ttatttagag cgtgagatgg aagatgaacc actcaacaaa ctgttcaatc atagcccggt
    15481 cttttcacga attccagggc cgaataaagt aaacaaccgt tatttaactg aagatatcgc
    15541 ttatggcctc gtcttatggt cgagcttagg tagggaaata ggggtgccta caccgaatat
    15601 tgatgcgatt attgtaatag cgtcaacaat tttagagcgt gatttcttca atgagggctt
    15661 aacaattgaa tacttaggaa gagaaaatgt agggttagct tcttactaaa aatacaaagg
    15721 ggagtgtgtt gtgtatgaaa agaaaaccta ctttattaga gtcactgtca accattttcg
    15781 tgatgatgat tgtggtttgt gtaggcttta tcttttttga aatacctgta caacctttat
    15841 taattatctc agcagcgtat gcgtcatgga ttgcatggcg tgtcggctta cgttggaaag
    15901 atttagaaga agggattacg gatcgtttag cgacagcgat gcctgcgata ttcattattt
    15961 tgacagtcgg tattatcgtt ggttcgtgga tgtattcagg cactgtacct gcactgattt
    16021 attatggttt gaaattttta agtccgagtt actttctcat ttcggcattt ctcatttcag
    16081 ccatcacttc agtagcaaca gggacggcat gggggtcagc atccactgca ggtatagctt
    16141 taatggcaat cggcttacat atggatattc cagcaggcat ggcagccggt gcaattattt
    16201 caggtgcagt atttggagat aaaatgtcac cattatcgga tacgaccaat ttggcatcat
    16261 tagtgacacg tgtgaacatt ttcagccata ttaaacatat gatttggacg actgtaccgg
    16321 catctatgat tggcctcatc gtttggcata tcgcatcaag aagattttca gttcagacga
    16381 atacagagca aattgacgca ttgttaaaag acattgctac aatgtacgat attaactttt
    16441 tcatttggct tccgttaatt gtcattgtcg tgtgtctctt agctaaaatt tcaactgtac
    16501 catcgatgct catttcaagt gtcgtagcca ttttcgttgg ttggttaaac aacggatttc
    16561 aacttaaaaa tggcttcatt gcgacattta gtggttttac accaaaaatg ttacttggtc
    16621 aagaaggctt gtctcaaaaa gcgttgtcat tgattgagca aggtggaatg atgagtatga
    16681 cgcaagtatt agtgacgatt ttttgtggct atgctttcgc aggaattgtc gaaaaagcgg
    16741 gctgtttaga cgtaattttg catagcattt ctaaaaatat taattcacgc ggtcagctca
    16801 ttctcgtgac ggttatcgga agtttaatga tggtgctcgc tgcaggggtg gcgtcagttg
    16861 tgattattat ggtcggcgtc ttactcatgc aaatgtatga caaaatggac ctggatcggg
    16921 tgaatttatc gcgaacatta gaagactctg gtacgatgat tatcccactc attccatggg
    16981 ggacctcagg catttattat acgcaacaac tgggtgtcgg tgtcggtcaa tttttcattt
    17041 gggctgtacc atgttatctt tgcgtacttt tcgcattgtt ctatggcttt accggcatcg
    17101 gcattaaaaa gaaagcatct gcttcattat aaaaaggata acgacgcatg attaaaagta
    17161 tatattctga aatcaaaaac aactgatttt aggtatatgc tttttttata agttaaataa
    17221 atcagtacga taggagtgag aaatgaagtg at
//
LOCUS       DANHPA010000054        17202 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.054, whole genome shotgun sequence.
ACCESSION   DANHPA010000054 DANHPA010000000
VERSION     DANHPA010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 17202)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17202)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17202
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.054"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            43..585
                     /gene="amaP"
                     /locus_tag="PTC28_001418"
     CDS             43..585
                     /gene="amaP"
                     /locus_tag="PTC28_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002432799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline shock response membrane anchor protein
                     AmaP"
                     /protein_id="HDK5716702.1"
                     /translation="MTRIKNFILGLLIVIIVGFLLFMYIDYQPIKEYQDYFYQFNWFQ
                     PLLIGLAGLLILIGLILFLRAFKPTYRKPGLYKDYSDGHIYISRKSIENTVYDTLSKY
                     DEVRQPNVVSKLYNKKKSSFIDITTDFIVPSESANVPSLVEQVRLDIKESVERFSELH
                     VKSVKVNVRDQKRDNGPRVV"
     gene            598..843
                     /locus_tag="PTC28_001419"
     CDS             598..843
                     /locus_tag="PTC28_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016426388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2273 domain-containing protein"
                     /protein_id="HDK5716703.1"
                     /translation="MSNENRNGQSERDSVEQFAKLLQSYKWRIIGFFFFLIIAILFLT
                     LGFWKTILIIVLCLIGIGVGYIKDRTQDFLNLLNRLS"
     gene            897..1388
                     /locus_tag="PTC28_001420"
     CDS             897..1388
                     /locus_tag="PTC28_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HDK5716704.1"
                     /translation="MTVENNKVKESYNRETGVNEKERQQREDNQGQQFSNSLTFSDEV
                     VEKIAGIAAREVRGILDMKGGFVDSISGSFSGGNNVTQGVSAEVGEKQAAIDLKVILE
                     YGESAPKIFRKVTELIKEQVKHITGLDVVEVNMQVDDVMTRKEWQQKHEKNKDQNENK
                     GLQ"
     gene            complement(1460..2605)
                     /locus_tag="PTC28_001421"
     CDS             complement(1460..2605)
                     /locus_tag="PTC28_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5716705.1"
                     /translation="MTIMRTLTFMLSIFIVGMVEMVVAGIMNLMSADLNISEAWIGQL
                     VTIYAFTFALTGPILVKLTEKYSPKSVLLSAIAFFVIGNLMIALSPNFTILIIGRIIS
                     SAAAALIVVKILSTTVVLARPENRGKMLGIVYTGFSASNVFGVPIGTLIGDWAGWRFT
                     FGLIILVGLIAGVLLTIYLPKEVKSSLQTTQNHTSRILDKGEVTKLLSITFILLTANS
                     VAYIYINPLILSGGHNIQFVSLALLIIGIAGMLGTSMGGFFTDKLSFKTWLLVSGGAF
                     VIVMLVLNQLWTASTILLIALFIWHIIQWSTNPAVQSGLIDQVEGDNSQVMSWNMSAL
                     NAGIGFGALLGGLIVSHIDLHATIYFAAGIGFIGFIIIVMLKKKRVA"
     gene            complement(2717..4684)
                     /locus_tag="PTC28_001422"
     CDS             complement(2717..4684)
                     /locus_tag="PTC28_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialic acid synthase"
                     /protein_id="HDK5716706.1"
                     /translation="MKTEQNHLSMMEKDFTKDEMENYQAVLQFDSNWATQFKRHVLVG
                     RDKITARLMASLYRENLVGSYTHSTFIQAEQLAHSAIPSGELLMIHFTYGQLTLYARV
                     ISHHAFNRVDVTGPFYWRTADGEDRRVLHPNEVLDVIINEDTRYQGASAEQFRDDMEN
                     SAAHMALSLSYQAQHPLKDAPSLLDYIEAQDDPYLTSEQLVVEGHPLHPGAKLRKGMS
                     AQETIDYSSEYQHAMLMQFILVHHDVARTMAQHGTYAEAVYHAFDGLKSVALQAIGSD
                     APLEDYMPLIVHPWQYEHIIRTEYQHELDTKAIIPLDYTKSYYAGLSFRTLMPKKPDV
                     SPHIKLSTNVHITGEIRTLSEQTTHNGPLMTNILTDISARDALFNNVSTSPVPEIAGA
                     HFYQPKDSHPDEQERRSEQLGTLFRQNIYDMIDSERLPVIPSSLVVTHPETARPLIVE
                     LVERFRQTNDTTTDIDVRAQWFKTYAASLIDYVVPLLVKYGIALEAHLQNTIAVFEPS
                     TGAFSHMLIRDFEGLRIDAEQLAQMGYDTSHFHEKSRILTKSQTSVFNKAFYSTIQNH
                     LGELVAVLSRFYHDVALENTLWSIVRQQIEQCFDKLEAADINPERLAHMQNVFFNEKI
                     DYKCVTTMRLMDEAHEYTYIKVDNPLSKSLI"
     gene            4785..5969
                     /locus_tag="PTC28_001423"
     CDS             4785..5969
                     /locus_tag="PTC28_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5716707.1"
                     /translation="MAKWFFSSTFLLFLGNWIGQIALNWYAYQLNENPMDLALINFFR
                     LAPIFILSLWAGSIADRYRRSTLIKMTVTSSMVITGTLTVCVLFMNDIPMFYLYIYAC
                     LRGCMSAIETPVRQAVLPDISERLSVSKAVSYHSFLLNVCRSIGPAVAGFIIAVYDVP
                     IAFVVQTICYALALVSSLPLKLAVVKPVKNKQFSIAVAMQYFKLHLQGRRIFMTSLLI
                     MAMGYSYTTMLPILTDEVYPNSASIFGTAMTVSAIGGILATLTIPYVLQKFSTDNCYY
                     LSSILFGIALLLLYPLGEIGLFLMIFFVGLFGQFARTTNRIYFQNDVEQESRGKILSV
                     IMMDRGMIPLGAMLLSYFTELIGITTTFLVMGGATTIIAILGFLTNFKMNGGKTVHDT
                     HA"
     gene            5953..7716
                     /locus_tag="PTC28_001424"
     CDS             5953..7716
                     /locus_tag="PTC28_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore synthetase"
                     /protein_id="HDK5716708.1"
                     /translation="MTLTHKLNADQNIQYRILIACMKEQLFPEKTQLQFKQNQVMIQY
                     HQHVLAVQYETISTLYQLELSGPIVYRVGTEDVTIETVEQLIEILGTHFGITFHDQLV
                     EELLHSRLGLELSYQQLRQRERVMRHSLKFSRMPDTLNFIAWLNHMNGDELFSVLGYT
                     EGMVWEGHPSHPLTKTKLPLNAEEIQQYAPEFMKIIPLKMVLVRKALLKSTTMTGEED
                     FVLRKMFPDKESQLRQWMQTYEGTLDDYRIILVHPWQYTNVITTRFKTMIAQHDVIPT
                     PFTVDSKATLSFRTMRLLHYPYHVKLPVNVQATSAVRTISTVTTVDGPKLSYQLQDML
                     DIYPTLTVASEPYGAHIDVEADLARQFAMIVRHSPEVHTHDYTQLVTAVLTQVNPVDG
                     QVVVDSLIEYLYGDMNGETIQQFMRQYMEALIPPLIAYIQQYGIALEAHQQNTILQMD
                     KENETLSFIVRDLGGSRIYPETLKQTVPDFEITNDSLVSDKIEAVIAKFQHAVIQNQL
                     GTLIHHFHHKHQIDEATLYTIAAAEIEASIDPTRPHADALKRILFGEKMTVKALLNMR
                     MEQKVKQYVQIDIKNPLEREL"
     gene            7720..8796
                     /locus_tag="PTC28_001425"
     CDS             7720..8796
                     /locus_tag="PTC28_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HDK5716709.1"
                     /translation="MPQIHINLSKIKYNAMVLQHMLAEQGIRMIPVTKCMGGDPKVRQ
                     QFREMGFNTLAESRLTAMMTNEQHPTEHDMMIKGALPHEIHDVVRYSQISIQTELETI
                     RALSDEAVAQGVKHHIYLMVDWKDGREGALTYEVVPLIKEIIRLKGVYLKGLSFNFMC
                     FRQIPPTEEDIVYINYFIESVERETGVKFKTISGGNSSMLTLAMYADLGRINELRIGE
                     ALFRGYETAYNMRLPYLFDNAVTLSGRILEIKPRLNLETRQSYMQALVDIGQLDTVIA
                     GIQPVDHQLKIVGHSSDTLMMNLGLADYYQLGDKIEFHLDYSALAHSMHMQHIPRSYE
                     EDLGIEQLVRGFVDIKKNNFIKQY"
     gene            8911..9855
                     /locus_tag="PTC28_001426"
     CDS             8911..9855
                     /locus_tag="PTC28_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017722966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDK5716710.1"
                     /translation="MIIVAACGNVSDTDKSKEKSEGTKSVEIKHDGGTTKIDKEPKRV
                     VALEYSFVDALVALGVKPVGIADDGKKSNLIDPLRDKVGDYKSVGARKQPNLEVISEL
                     KPDLIIADNNRHKGNYEQLSKIAPTILLPSLDSDYKDNIEAFKTIAKALSKEDQADKR
                     LKEHEEKIDKYTKQVTMDKDKKVLPAVISQSGFLAHSDKSYVGQFLRDLGFKEALTKE
                     VADQLPEYLNAPYLNMNSEQLAEVNPERMFIMVNGENDPYYAKMKKDPVWSQIEAVKN
                     NRVHVVDRQTWAKSRGLISSEEIAKELVEISKKESNDK"
     gene            9999..11024
                     /locus_tag="PTC28_001427"
     CDS             9999..11024
                     /locus_tag="PTC28_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDK5716711.1"
                     /translation="MSKLNTKLNDEHHQRRRTTLTFIVSVCFLIFAVYLNLAIGSSKI
                     SFQSMLDYFFHLKTTKATFLIHNVRMPRMIASAMIGAALAVAGVLMQAITRNPLASPQ
                     IFGVNAGASFIVVLITVFLPALADNTVVFAFVGAFIGGFTVYTLADTTKGMTPVKLAL
                     AGMTIHLFFTSLTQGIILLNEDATTTVMFWLVGALHTIKWPQIFQVLPWIIGGLIAAL
                     LLGRQLAILNLGDQLATGLGQNTKRIRALAGLLVIILAGASVSIAGPIGFVGLIVPHI
                     VKHYLNRNYFLIITLSMIMGANLLLISDVISRLIAFPFESPVGIVTSFVGALYFLWIT
                     MRGVKTR"
     gene            11021..11983
                     /locus_tag="PTC28_001428"
     CDS             11021..11983
                     /locus_tag="PTC28_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HDK5716712.1"
                     /translation="MNIHFGRRYSLIIGLLIVGAILSLSAGAVWISPIAVIKEVWSGD
                     NFILSEFRVPRMLLGILVGAALAISGAVIQGVIRNPLASPDVIGITKGASLAAVIVII
                     VFPTAPLFVLPVASFIGALVISLILSLLISWQGIKGSQLALIGMAIGAVAMALVQYLL
                     IRNPMEANIALVWLTGSLFGRSMDHVLTILPWLIVAIPVIFLYARKLDILHLGEEVAT
                     ALGTHVQRTKMILLFTSVMLAGAAISVVGGLSFLGLIAPHIARSLVGHQHRHIVAMSG
                     LVGALLMVIADGLARIIAPPIDIPVGVLIAIIGAPYFLYVLRKM"
     gene            12104..13474
                     /locus_tag="PTC28_001429"
     CDS             12104..13474
                     /locus_tag="PTC28_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjiH family protein"
                     /protein_id="HDK5716713.1"
                     /translation="MEDLNQKEKNTGRLKFIVLSLIGIVLFLIPLPVIEDGKRTTTLP
                     IAFLAKQFQAILGPAIPWIILLIIIVSGILTILCSTVLKHRIPKNSFRANAFIVTWPW
                     FVIRMLAIIIVCMTFLNKGFSWVYSEDTGGLIFTGLLPTLVAVFFFAAIFLPLLLEYG
                     LLEFLGPIFRPVMRPLFTLPGRSTVDNLASFIGDGTVGVMITSKQYDEGYYTRREATV
                     IATTFSVVSLTFAIVIAETIGLIHRFALFYGTVVLACFIAALIMPRIWPLRYVEDRYS
                     DGATAEERPEKQYSYKESFRRGYEDALLTAYRAPGFKQYMVTAFKTVMDMWLVVIPVV
                     MTVGTLATILATYTPIFTWIGLPFVPLLELLQVPEAQAASETMIIGFADMFLPSILIE
                     SVENSMTQFIVGVLSVCQLIYLSEVGGVILGSKIPVGLGKLFAIFLIRTLITLPIIVL
                     VAHLFF"
     gene            complement(13958..14218)
                     /locus_tag="PTC28_001430"
     CDS             complement(13958..14218)
                     /locus_tag="PTC28_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016426399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716714.1"
                     /translation="MAMTVKKNEEEIHIQWRVADIHIPNDEILNVSEDQDIHAVPEVD
                     AKKVYRIGSTFGKTNRVIIDTNKQQYIIYTFNDKKVYNEVTK"
     gene            14408..14914
                     /locus_tag="PTC28_001431"
     CDS             14408..14914
                     /locus_tag="PTC28_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDK5716715.1"
                     /translation="MTGKTHSAAGILIGAAVGIHFQLDIFEMATCIVVSGLASIFPDI
                     CHTRSKIGQRLPIISLIIKHLFGHRTFTHSLLFMFVVYYALHMIETPIYYMIGIICGM
                     LSHVILDMLTPRGVHLFFPIPIRIRFPIHFKTGGTIDLSLATTFSFVTLYLLFESTMK
                     QILNYFLQ"
     gene            14987..16177
                     /locus_tag="PTC28_001432"
     CDS             14987..16177
                     /locus_tag="PTC28_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase"
                     /protein_id="HDK5716716.1"
                     /translation="MLESHKLEKYNQSHLTEYEKLMSTNEKERLNDKIAQLDLGEIQS
                     LYQQVYVNRQTIDDVSDVQEVNYETTAHMTDETIEFYRQLGLQAIQEGQFAVLLMAGG
                     QGTRLGYKGPKGSFEIEGVSLFELQARQLKALKEKTGHFVDWYIMTSDINDEATRAFF
                     QEHNHFDYNAEHIYFFKQDNIVALNEQGQLILDKNGSIMETPNGNGGIFKSLKKAGYL
                     DQMAERHNEYIFVNNIDNVLVKVLDPLFAGFTVHHHKDVTSKSIAPLVGEKVGRLAVR
                     SGKDTVLEYSELDPEVANQFNNANIGIHAFRRTFIENAVDKSLPYHLAIKELEQLDED
                     FGVVKKPTLKFELFYFDIFQYATSFVTLQVARDEEFSPLKNKEGQDSIETATNDLKRM
                     NMIE"
     gene            16188..16868
                     /locus_tag="PTC28_001433"
     CDS             16188..16868
                     /locus_tag="PTC28_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HDK5716717.1"
                     /translation="MTKSATKKKTTLETFKEMSPLSFGEEVGNSVSHGVAAFIMLLTL
                     PYAAVYSYAHHGVLMSVSVSVFVISIFLMFISSTVYHTMQQASPHKYVMRIIDHSMIY
                     VAITGTYTPVSLVLVGGWLGWSIMIILWGTTIWGILYKAIATKVNPKLSLMIYLIMGW
                     VGVIYLPIIISQSKWLFFIFILLGGLAYTIGAWFYAQKNRPYFHMIWHIFILIASLFH
                     FIGILYFM"
     gene            16881..17078
                     /locus_tag="PTC28_001434"
     CDS             16881..17078
                     /locus_tag="PTC28_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716718.1"
                     /translation="MKPHYKLFMFALMVLLLFQVYFAYYYLLGDGALTASPLLGWVSL
                     GLGILIVIIMISVHRQHKKNM"
BASE COUNT         5262 a         3017 c         3543 g         5380 t
ORIGIN      
        1 tatacctgat gtaaacaatt gaataggagg tggcatttga ttatgacacg aatcaaaaat
       61 tttattcttg gcttgttgat agtcattatc gtaggtttct tgttatttat gtatattgat
      121 tatcagccaa tcaaagagta tcaagattac ttttatcagt ttaattggtt ccaaccctta
      181 ttaattggtc tagctggatt acttattctt atcggtttga ttttattctt aagagctttc
      241 aaacccacat atcgtaaacc ggggctttat aaagattatt cagacggcca tatttatatt
      301 tcacgtaagt ctatcgaaaa cacggtttat gatacgcttt cgaaatatga tgaggttcgt
      361 caaccgaacg tcgtatcaaa actttataac aagaaaaaga gcagtttcat tgatattaca
      421 acagatttta ttgttccatc agaatcggcg aatgttccat cactcgttga acaagtaaga
      481 ttagacatta aagagagcgt tgaacgtttc tcagaattgc atgtcaaatc agttaaagtc
      541 aatgtccgtg accaaaaaag agacaatggt ccacgagtcg tgtaaaggag gggtcctatg
      601 tctaatgaaa atcgaaacgg tcaaagtgag cgagattcag tagagcaatt tgcgaagcta
      661 ttacaaagct ataaatggcg tatcattggg tttttcttct tcctcattat tgccatcttg
      721 tttttaacac ttggcttttg gaaaacgatt ttaatcatcg tattatgttt aatcggtatt
      781 ggtgtggggt atattaaaga ccgtacacaa gatttcttaa atttacttaa tcggttaagt
      841 taattcaata atcatggaaa aagaaaaata aaataaataa taaaggagtt tttgaaatga
      901 cagttgaaaa taataaagta aaagaaagtt acaatagaga aacaggcgtg aatgaaaaag
      961 aaagacaaca acgtgaagat aatcaaggac aacaattttc aaatagctta actttctctg
     1021 atgaagttgt agaaaaaatt gcagggattg cagcacgtga agttcgtggt attttagata
     1081 tgaaaggcgg ctttgtggat agcattagcg gttcattctc aggtggcaac aatgtgacac
     1141 aaggtgtatc tgctgaagtt ggcgaaaaac aagcagcaat cgacttgaaa gttattttag
     1201 aatatggtga atctgcgccg aaaatcttcc gtaaagtaac agaattaatt aaagaacaag
     1261 tgaaacacat tactggttta gacgtggttg aagttaacat gcaagtggat gacgtgatga
     1321 cacgtaaaga atggcaacaa aagcatgaga aaaacaaaga tcaaaacgag aacaaaggtt
     1381 tacaataaga tataaaaaag ggaggtatac gctggaatat ggcgtatacc tccctttttt
     1441 atatctttgt taatcaagtc taagcgacgc gttttttctt caacatcacg ataatgataa
     1501 agccgatgaa gccaataccg gcagcgaaat aaatcgtcgc atgtaaatcg atatgtgaca
     1561 cgattaaacc accaagtaag gcaccaaaac cgatacccgc attcaacgca gacatgttcc
     1621 aactcatcac ttgactgtta tccccttcta cttgatcaat gagcccggat tgtaccgctg
     1681 gattggtact ccactgaata atatgccaaa tgaataaagc aatcagtaaa atagtagatg
     1741 ctgtccaaag ttgatttaaa acgagcatga cgatgacaaa ggccccacca ctcactaaca
     1801 gccatgtttt aaatgacagt ttatctgtaa agaacccccc catggatgtc cccagcatgc
     1861 ccgcgatacc gattatgagt agggcgagag agacaaattg gatgttatgt ccgccagata
     1921 atatgagtgg attaatgtaa atataagcca ctgaatttgc tgttaataat ataaaagtaa
     1981 tcgataggag ttttgtcact tctcctttgt ctaaaattcg gctagtatga ttttgcgtag
     2041 tctgtaggga tgattttact tcttttggca aataaatcgt gagcagtacg cctgcaatca
     2101 atccgactaa gatgatgagc ccgaatgtaa aacgccatcc tgcccaatcg ccaattaatg
     2161 taccaatcgg aacaccgaat acgttggatg cactaaaccc tgtatacaca atgcctaaca
     2221 ttttaccacg gttttcaggt cgcgctaata cgacagttgt ggaaagtatt ttaacgacga
     2281 tcaatgcagc ggctgctgac gaaatgatac gaccgataat taaaatcgta aagttagggg
     2341 agagtgcaat catcaaattt cctattacga aaaaggcaat cgctgatagt aacacacttt
     2401 taggtgaata tttttcggta agtttcacta aaataggacc tgttaaagca aaagtaaaag
     2461 cataaatcgt cacgagttga ccgatccatg cttctgatat atttaaatct gcgctcatca
     2521 gattcataat gccagcgaca accatttcaa ccattcctac gataaaaata cttaacataa
     2581 acgttaaggt acgcatgatt gtcatagtca ttctcctcaa atgtaatttt tgtctataag
     2641 ttattttaat acaattacat aggataagaa atacttttga ctcaatcttt agtagaaata
     2701 tgttattgtg ctacttttaa atcaatgatt ttgaaagtgg attgtcgact ttaatatatg
     2761 tgtattcatg tgcttcatcc attaaccgca tcgttgtcac acatttataa tcaatctttt
     2821 cattaaagaa tacgttttgc atgtgggcta aacgttctgg attaatgtca gcggcttcaa
     2881 gcttgtcaaa acattgttcg atttgttgac gaacgataga ccataacgtg ttttcgagtg
     2941 caacatcatg ataaaaacgt gagagcactg cgacgagttc accgagatga ttttgaatcg
     3001 ttgagtaaaa ggctttgttg aacacagatg tttgactctt cgtcagtatt cgtgattttt
     3061 catggaaatg agacgtatca tagcccattt gtgctaactg ttctgcatcg atgcgtaagc
     3121 cttcaaagtc acggatgagc atatgtgaaa aggcgccagt acttggctca aatacagcaa
     3181 ttgtgttttg taaatgtgct tctaatgcga taccgtattt cactaatagt ggcacgacgt
     3241 aatcaatgag tgaagcggcg tatgttttaa accactgtgc acgtacgtcg atgtctgttg
     3301 tggtgtcatt tgtttgccta aaacgttcaa ccaattcgac gataagtgga cgcgctgttt
     3361 ctggatgtgt gacgactaga cttgatggaa taactggcag gcgctcactg tcaatcatgt
     3421 cataaatatt ttgtctaaat agcgtgccta actgttcgct acgtcgttct tgttcatcag
     3481 ggtgactgtc tttcggttga taaaaatgag cgccggcaat ttctggtact ggtgaagttg
     3541 agacgttgtt gaaaagtgca tctcgtgctg aaatgtcggt taaaatgttg gtcattaaag
     3601 gtccgttatg cgtcgtctgt tctgatagag tacgaatctc gccagtaatg tgcacattag
     3661 ttgaaagctt aatatggggt gacacgtcag gctttttagg cattaatgtg cgaaaagaca
     3721 atcctgcata atatgatttt gtataatcta acgggatgat tgcttttgta tcaagttcgt
     3781 gttggtattc tgtgcgaata atatgttcat attgccacgg atgaacgatc aaaggcatat
     3841 aatcttcgag tggcgcatcc gaacctatcg cttgtaacgc aactgacttc aacccgtcaa
     3901 atgcatgata gaccgcttct gcatatgtgc catgttgtgc cattgtacgt gcgacatcat
     3961 gatgaacaag tatgaactgc atcagcatcg cgtgttgata ttctgaggag taatcaatgg
     4021 tttcttgtgc ggacatgcct ttacgtaatt ttgcaccagg atgtaacgga tgcccttcaa
     4081 caacgagttg ctcagaagtt aagtaaggat catcctgtgc ttctatataa tcaagtaatg
     4141 atggcgcgtc ttttaatgga tgttgtgctt ggtaactcag cgacagagcc atatgtgcgg
     4201 cactattctc catatcatca cgaaactgtt ctgcggatgc tccttgatag cgtgtgtctt
     4261 cattaatgat gacatcaagt acttcgttag gatgcaatac gcgacggtcc tctccatctg
     4321 ctgttctcca ataaaacggt cctgtcacat caacacggtt aaatgcgtga tgactgatga
     4381 cacgggcata taacgtgagc tgaccatatg taaagtgaat cataagtagt tcgccggatg
     4441 gaatagcaga gtgcgctaac tgttctgctt gtataaacgt gctatgggta taacttccaa
     4501 ccaagttttc acgatacagt gatgccatca gtcgtgcagt gattttgtca cgacctacta
     4561 aaacgtggcg tttaaattgt gtagcccagt tcgaatcaaa ttggagaact gcttgataat
     4621 tttccatttc atcttttgta aagtctttct ccatcatact cagatgattt tgttccgttt
     4681 tcatgacgac acctcattca ttttatttta caaatacgaa aaggattcgt ataatccata
     4741 atatcggaaa tgagaatcat tatcaattaa agaaggtgaa tattttggca aaatggtttt
     4801 tttcgagtac ctttttacta tttttaggga attggattgg tcagattgca ctcaactggt
     4861 atgcttatca actcaatgaa aacccaatgg accttgcact catcaacttc tttagacttg
     4921 caccgatttt cattttaagt ttatgggcag gcagtattgc tgatcgttac cgtcgttcaa
     4981 cgctgattaa aatgactgtg accagttcga tggtcattac aggtacttta acggtatgtg
     5041 tattgttcat gaatgacata cccatgtttt atttatacat atatgcctgt ttgcgcggtt
     5101 gtatgagtgc cattgaaaca ccggtgagac aagctgtgct acccgacatc tccgaaagac
     5161 tttctgtttc taaagctgtt tcatatcatt cctttttgtt aaatgtttgt cgctcaatcg
     5221 gacctgctgt ggcgggcttt atcattgcag tgtatgatgt gccgattgca tttgtcgtac
     5281 aaacgatttg ttatgcactt gcactcgttt caagccttcc gttaaaattg gcagtcgtta
     5341 aacctgttaa aaacaagcaa ttttcaatag ctgtcgcgat gcaatatttt aaactgcatt
     5401 tgcaagggag aagaattttt atgacgtcgc tactcatcat ggcgatgggt tattcttata
     5461 ccacaatgtt accgatttta acagacgagg tatatcctaa tagcgcatcg atatttggta
     5521 cagcgatgac agtgagtgca ataggtggta tattagcaac gctcacgatt ccttatgtac
     5581 tacaaaaatt ttcaactgac aattgttatt atctcagttc gatactgttt ggtattgcgt
     5641 tacttttatt ataccccctt ggcgaaatag gcttattttt aatgatcttt ttcgttgggc
     5701 tctttggtca gtttgcacga acgacgaatc gcatttactt tcaaaatgat gttgaacaag
     5761 agagtagagg taaaatttta agcgtcatta tgatggatag agggatgatt ccacttggcg
     5821 caatgttgct cagttatttt acagagttga ttggtattac gacgaccttt ttagttatgg
     5881 gtggcgcgac gaccatcatt gcaattttag gctttttaac aaattttaag atgaatggag
     5941 gcaagacagt tcatgacact cacgcataaa ctgaatgcag atcaaaatat tcaatatcgg
     6001 attctcatcg catgtatgaa agaacaatta tttcctgaaa aaacacaact tcaattcaaa
     6061 caaaatcaag tcatgattca atatcatcaa catgtgttag cagttcaata tgagacgata
     6121 agtacgttat accaactcga attgagcggt cctattgttt atcgtgttgg cacggaggac
     6181 gtcacgattg aaacagtaga acaattgata gagattttag gcacgcattt tggcataacg
     6241 tttcacgatc aattggttga agagttgcta catagtcgtc tcggtcttga actgagctat
     6301 caacagctgc gtcaacgtga acgtgtgatg cggcattcgt taaaattttc acgcatgcca
     6361 gacacgctga actttattgc atggttaaat catatgaatg gtgatgaatt attttcagta
     6421 cttggttaca cggaaggtat ggtttgggaa gggcacccgt cacatccatt aacgaaaacg
     6481 aaattgccac tcaatgcaga agaaattcaa caatatgcgc cagaatttat gaaaatcatt
     6541 ccattaaaaa tggtactcgt acgtaaagcg ttattaaaaa gtacaacaat gactggtgaa
     6601 gaggatttcg tattgagaaa gatgttccca gataaagaaa gtcaattaag acaatggatg
     6661 caaacatatg aggggacgtt ggatgattat cggattatac tcgttcatcc atggcaatat
     6721 accaatgtga ttacgacgcg gtttaaaacc atgattgcgc aacacgacgt tattccaacc
     6781 ccatttacag tagattcgaa agcgacatta tcatttagaa cgatgcgctt actgcattac
     6841 ccatatcatg tgaaattacc tgttaacgtt caagcaacga gtgctgtgcg tactatttcg
     6901 actgtgacga cggtcgatgg tcctaaactc agttatcaat tacaagacat gttagacatt
     6961 tatccgacct tgactgttgc aagtgaaccg tatggtgcgc atattgatgt ggaagcagat
     7021 ttggcacgtc agtttgcgat gattgtgcgt cattctcctg aagtgcatac acatgactat
     7081 acgcaacttg tgacagctgt tctgacgcaa gtaaatcctg tcgatggcca agtcgtcgtc
     7141 gatagtttga ttgagtatct atacggggac atgaatgggg aaacgataca gcagtttatg
     7201 cgtcaataca tggaagcact gattccgcca ctcattgcgt atattcaaca atacggtatc
     7261 gcgttagaag cacatcaaca aaatacaatt ctgcaaatgg ataaagaaaa tgagacactg
     7321 tcctttattg tacgtgactt aggaggttcg cggatttatc ctgaaacatt aaaacaaacg
     7381 gtccctgatt ttgaaattac gaacgacagc ttagtgagtg ataagattga agcagtcatc
     7441 gcaaagtttc agcatgcagt tattcaaaat caactcggta ctttgattca tcatttccat
     7501 cataaacatc aaattgacga agcgacattg tatactatcg cagcagcaga aatcgaggca
     7561 tccattgatc caacacgtcc acatgcagat gcgctaaaac gtattttatt cggtgagaag
     7621 atgaccgtta aagcgttact taatatgaga atggaacaaa aagtaaaaca atacgtgcaa
     7681 atagacataa aaaatccttt agaaagagag ctgtagttta tgcctcaaat acacattaat
     7741 ctgagtaaaa ttaaatataa tgcgatggtt ttacagcaca tgcttgcaga acaagggata
     7801 cgtatgattc cagtgacgaa gtgtatgggt ggcgatccca aagtgcgtca acagtttcgt
     7861 gaaatgggtt ttaacacttt ggctgaatca cggttaacag cgatgatgac gaatgaacaa
     7921 catcccactg aacacgatat gatgattaaa ggggcactgc cacatgaaat ccacgatgtt
     7981 gttcgctata gtcaaatcag catccaaaca gaactggaga cgattcgcgc gctcagtgac
     8041 gaagcggttg cacaaggcgt aaaacatcat atttatttaa tggtcgattg gaaagacggg
     8101 cgagaaggtg cactcacata tgaagttgtg ccactcatta aagaaattat tcgcttaaaa
     8161 ggggtctatt taaagggact gtcatttaac ttcatgtgtt tccgtcaaat tccaccgact
     8221 gaagaagata ttgtgtatat caattatttt atagaatcag ttgaacgaga aacaggcgtg
     8281 aaattcaaga cgatttcagg tgggaattcg agcatgttga cactagcgat gtatgcggat
     8341 ttaggacgta ttaatgaact gcgaatcggt gaagcactat ttagaggtta tgaaacggct
     8401 tataacatgc gcttgccgta tttatttgat aatgcagtga cattaagtgg gcgtatttta
     8461 gagattaaac cgcgcttaaa ccttgaaaca cgtcaatctt atatgcaagc tttagtcgat
     8521 attggacagc tcgacaccgt tattgctggt attcaacctg tagatcatca gcttaaaatt
     8581 gtcggtcact ctagcgatac actcatgatg aatctaggac ttgcagatta ttatcaactt
     8641 ggcgacaaga ttgagttcca cttagattat agcgcgctcg cacatagcat gcatatgcaa
     8701 catattccga gaagttatga agaagatttg ggcattgagc aattggtaag gggatttgtc
     8761 gatatcaaaa agaataattt tatcaaacag tattgacatt gagaatcgtt atcaactatt
     8821 attaaaatgt atttgaaaaa catagttcaa aggagtggca gaatagtgaa aacaaagaaa
     8881 tggtggggga ttgtcgccct aattgctgta atgatcattg ttgcagcttg tggcaatgta
     8941 agtgatactg acaagtcaaa agagaagtca gaaggtacaa aaagtgttga aattaagcac
     9001 gacggtggca caactaaaat tgacaaagag cctaaaagag ttgtcgcttt agaatattca
     9061 tttgtggatg ctttagtcgc attaggtgtg aaaccagtgg ggatcgcgga tgatggtaaa
     9121 aaatcaaacc ttatcgatcc acttcgcgat aaagtgggtg attacaaatc agtaggtgca
     9181 cgtaaacaac ctaacttaga agtcatcagt gaacttaaac ctgatttaat tattgcggat
     9241 aataaccgtc ataaagggaa ctatgagcaa ttaagtaaaa tcgcaccaac tattttatta
     9301 ccaagtctag attctgacta caaagacaat atcgaagcgt tcaaaacaat cgccaaagca
     9361 ttatctaaag aagatcaagc tgacaaacga ttaaaagaac atgaagaaaa aattgataag
     9421 tacacgaaac aagttacaat ggataaagac aaaaaagttt taccagctgt aatttctcaa
     9481 tcaggttttt tagcacactc tgacaaatca tatgttggtc aatttttgcg tgaccttggt
     9541 ttcaaagaag cattaactaa agaagttgca gatcaattac ctgaatactt aaacgcacca
     9601 tacttaaata tgaactcaga acaattagct gaagtgaacc ctgagcgtat gtttattatg
     9661 gtgaatggcg aaaatgatcc atattacgct aaaatgaaaa aagacccagt ttggagtcaa
     9721 atcgaagcgg ttaaaaataa tcgcgttcat gttgttgatc gtcaaacatg ggcaaaatca
     9781 agaggattaa tctcttcaga agaaattgca aaagaacttg ttgaaatttc taaaaaggaa
     9841 agcaacgaca agtaggagtt cgatagggat agaaaaatta acgcattaag tgagttcgtt
     9901 caatgtacga ttctagtgag tttacgtgca tgatagatga acgggctaaa atgtaagtat
     9961 cccaagctca tgtcattgaa tataaaaggt gatttgttat gtcaaagtta aatacaaaat
    10021 taaatgatga acatcaccaa agaagacgca ctacgcttac gtttattgta agcgtgtgct
    10081 ttcttatttt tgcagtttat ttaaatcttg caatcggttc atcaaaaatt tcttttcaat
    10141 cgatgttaga ttatttcttt catctgaaaa caacaaaagc aacattttta atacataacg
    10201 tacgaatgcc aaggatgatt gcaagtgcga tgattggcgc cgcattggct gttgcagggg
    10261 tactaatgca agcgattaca cgcaatccac ttgcttcccc acaaattttc ggtgtcaatg
    10321 cgggcgcttc gtttatagtc gtcctcatta ctgtttttct ccctgcatta gctgataata
    10381 ctgtagtgtt tgcctttgtc ggtgcattta tcggaggctt taccgtttat acacttgctg
    10441 atacgactaa aggaatgacg cccgtaaaat tagcacttgc agggatgacg atccacttat
    10501 ttttcacaag cttaacgcaa ggtatcatat tgttaaatga agatgctacg acaacagtga
    10561 tgttttggct tgtcggtgcg ttgcatacga ttaaatggcc gcaaatattc caagttttac
    10621 cgtggatcat cggtggactt atcgccgcac tgttacttgg gcgtcaactt gcgattttaa
    10681 atctagggga tcagttggca acaggtctcg gccaaaatac gaaacgcatt cgtgccttag
    10741 ctggactact cgtcatcatt ttagcaggtg cgagtgtgtc tattgcaggc cctataggtt
    10801 tcgttggtct catcgtgcca catatcgtca aacattattt gaaccggaat tattttttaa
    10861 tcattacatt gtctatgatt atgggggcta atttattatt gatttctgac gtcattagcc
    10921 gtttaattgc ctttccattc gaatcaccag tcggcatcgt aacatccttt gtcggcgcgt
    10981 tatacttctt atggattaca atgagaggag tgaaaacacg atgaatattc attttggtag
    11041 acgctatagt ttaatcatcg gacttcttat tgtgggcgcc atcctaagtt taagtgcagg
    11101 tgcggtttgg atttcaccga ttgcggtaat aaaagaagta tggtcaggtg acaactttat
    11161 attaagtgaa tttagagtac cccgtatgtt actcggtata ttagtcggag cggcattagc
    11221 gatttcgggt gcagtcattc aaggtgtcat tcgaaatcct cttgcgtcac cggatgttat
    11281 tgggattacg aaaggggcaa gtttagcggc ggttattgtc attattgtgt tcccgactgc
    11341 gcctttattt gtgcttccag ttgcttcatt tattggggca ttagtcatca gtctcatttt
    11401 atccctgttg attagttggc aggggattaa aggttcacaa ctggcgctga tcgggatggc
    11461 aattggtgct gttgcgatgg cgttagtaca atacttactc atccgtaacc ctatggaagc
    11521 caacattgca cttgtatggt taaccggcag tcttttcggt cgttcgatgg accatgtgtt
    11581 gactatttta ccttggctga ttgtagcgat tcctgtcatt ttcttatatg cgagaaagct
    11641 cgatatttta catttaggag aagaagttgc gacggcgttg ggtacgcatg tacaacgcac
    11701 gaaaatgatt ttactcttca catccgtgat gttggcaggt gcagcaattt ctgtagttgg
    11761 tggattaagc tttttaggac tcattgcgcc acacattgca agaagtcttg tcggtcacca
    11821 acaccgtcat atcgttgcga tgtcaggatt agtaggtgca ttattaatgg ttattgcgga
    11881 tggtttggca cgtatcattg caccgcctat tgatatacca gtcggcgtgt tgattgcgat
    11941 tattggtgca ccatatttcc tttatgtgtt acgaaaaatg taacggataa acttgcaata
    12001 aaatcgtttg tgtttgattg aatattgcat atatatagga tattttgtat aatttatatc
    12061 aattgttgaa ctgtctgata ctaaggggag aaggcgggag gaaatggaag atttgaatca
    12121 gaaagaaaaa aatacaggga gattgaaatt tattgttctt tcactcattg gaattgtgct
    12181 gtttttaatt ccactccctg tgatagaaga tgggaaacgt acgacaacgt tacctattgc
    12241 atttttagca aaacaatttc aagcgatact cggaccagcg attccatgga tcattttgct
    12301 gattattatc gtttcaggaa ttttgacgat attatgtagc accgttttaa agcatcgtat
    12361 accgaagaat agctttagag cgaatgcatt tattgtgaca tggccatggt ttgtcattcg
    12421 gatgctggcg atcattatcg tttgtatgac atttttaaac aaaggatttt catgggtata
    12481 ttcagaagat acgggaggtc ttatttttac aggattgctc ccaacgctag tcgcagtatt
    12541 cttctttgcg gcaatctttt taccattatt gcttgaatac ggtttactag agtttttagg
    12601 tccgattttc agacctgtta tgcgaccgtt gtttacactt ccaggacgtt caactgtaga
    12661 caacctcgca tcatttatcg gtgatggcac agtcggcgtg atgattacga gcaaacaata
    12721 tgatgaaggg tattatacac gacgagaagc tacagtcatt gcgacgacgt tcagtgtcgt
    12781 ttcattaaca tttgcgattg taatagcaga aacgattggc ttaattcatc gtttcgcact
    12841 tttttatggg acagtcgtgt tagcctgttt catcgcagca ctcattatgc ctagaatttg
    12901 gcctttgcgc tatgtagaag accgttattc agatggtgca acagctgaag aaagaccaga
    12961 aaagcaatac agttacaaag aatcattccg tcgaggttat gaagatgcac tgttgacagc
    13021 atatcgtgcg cctggattta aacaatacat ggttacagcc tttaaaacgg tgatggacat
    13081 gtggcttgtc gtcattcctg tcgtgatgac tgtcggtaca ttagcaacta ttttggcgac
    13141 gtatacaccg atattcacat ggattggatt accatttgta ccgcttttag agttgttaca
    13201 agtaccagaa gcacaagcgg cctctgaaac aatgattatc ggctttgcgg acatgttttt
    13261 accatctatc ttaatcgaaa gtgtcgaaaa ttcaatgaca caattcattg tcggtgtatt
    13321 aagtgtctgt caattgattt atttatcaga agtcggtggc gttattttag gatcaaaaat
    13381 tccagttgga ttaggaaaac tttttgcaat ctttttaatc cgtacattga ttacgttacc
    13441 aattattgtg ttagtggcac atttattttt ctaaaacaaa gcgcaatcaa aagaaaacag
    13501 gcgaggacac aacctttgca aatttttcta ttggtattga tgtgattgcc cttttgaatt
    13561 cgcgttccca agggatttgt cttaactaaa tttggttcga ttaaagtgta catagggtgg
    13621 gagccaaatt ggattttcgt cagtgagttg aaggacccac ccctaggaaa gccatgatgt
    13681 caatcacaaa ccacaagtta tggggagggc aattagaaca aacataatgc atcaatcgca
    13741 tcaaaaattt tttatgtccc atccccgttt taaatttttg tgccaaactc aatcgttttt
    13801 attgaatgat tgggtattga taaatgttgc taataaaaag gaaacaggtt acgggttttt
    13861 aattcccaac ttgtttcctt tttgtatgat tccttattca tataaacacg taaaaaaatg
    13921 ggacagcgta agccatccca tttcataact ttaagtatta cttcgtcact tcattgtata
    13981 cttttttatc attaaacgta taaataatgt attgttgttt gtttgtgtcg ataatcacac
    14041 ggtttgtttt accaaatgta gaaccaatac gataaacttt ttttgcatct acttcaggta
    14101 ctgcatgaat atcttgatct tcactcacat ttaggatttc gtcattagga atgtgaatat
    14161 ctgctactct ccattgaata tgaatttctt cttcattttt ctttactgtc attgccatta
    14221 caaaacacat cctttatttc tatttgtaga ttcattgtaa ctgattgaaa ccgctttttc
    14281 aaataaaatg agttacagaa agttaaatgt gtcatactat ttgaggattg atgggatata
    14341 cgaaaatatg ttcgtgtttt tgtacgtttt atggtataat ccacacatca atagaaaggt
    14401 ggttaacatg accggcaaaa cacactctgc tgcaggtatt cttattggag ctgcagtggg
    14461 catacatttc caattagata tttttgaaat ggccacatgc attgttgtat ctggtttagc
    14521 gagtattttt cctgacatat gccatacgcg gagtaagatt ggacaacggc tgcctatcat
    14581 cagtctgatt atcaaacatc tgtttggcca tcgtactttt acacattctt tactctttat
    14641 gttcgtggtt tactatgcat tacatatgat tgaaacacca atttactata tgattggtat
    14701 aatttgtggt atgctttcac atgtgatatt agatatgtta acaccgagag gcgtacattt
    14761 attttttccg ataccgattc gcatacgttt cccaattcac tttaaaacag gtggtactat
    14821 agatttatca cttgcgacta cttttagttt tgtcacattg tatttgttgt ttgagtcgac
    14881 aatgaaacaa attttaaatt actttttgca atagtgatta aattatatga agtgatgtgt
    14941 taatgaaatt gagtcacagc tttattaaag gagcgtacaa tttattatgt tagaaagtca
    15001 taaacttgaa aaatataatc aatcacattt aacagaatat gaaaagctta tgagtacgaa
    15061 cgagaaagag cgactgaacg acaaaattgc tcaactagat ttaggagaaa ttcaatcact
    15121 ctatcagcaa gtttatgtga accgtcaaac gattgatgat gtttcagacg tccaagaagt
    15181 gaactatgaa acaactgcac atatgacgga cgaaacgata gaattttatc ggcaactcgg
    15241 tttacaagcc attcaagaag gtcaattcgc tgtattgtta atggcgggcg gtcaaggaac
    15301 acgtttaggt tataaagggc ctaaaggttc atttgaaatt gaaggtgtga gcttgtttga
    15361 attgcaagca cgccaattaa aggcattaaa agaaaaaaca ggtcattttg tcgattggta
    15421 cattatgaca agtgatatta atgatgaggc tacacgtgca ttttttcaag agcataatca
    15481 tttcgattat aatgctgaac atatttactt ttttaaacaa gacaatatcg tggcgttaaa
    15541 tgaacaagga caattgatat tagataaaaa cggtagcatt atggaaacac cgaatggtaa
    15601 tggtggtatt ttcaaatcgt tgaaaaaggc gggttacctt gatcaaatgg ctgaacgtca
    15661 taatgagtat attttcgtga ataatattga taatgttctt gtcaaagtgt tggatccatt
    15721 attcgctggt ttcactgtac atcaccataa agatgtgacg tctaaatcta ttgcaccact
    15781 tgtaggcgag aaggtaggcc gtctagcagt tcgaagtggt aaagacacag tgttagaata
    15841 ttcagagctt gatcctgaag tagcgaatca atttaacaat gccaatatcg gtattcatgc
    15901 gtttcgtcgc acatttattg aaaatgcagt agacaaatca cttccttatc atcttgctat
    15961 taaagagctt gagcaattag atgaagattt tggtgttgtg aaaaagccga ctttaaagtt
    16021 tgaactgttt tattttgata tttttcaata cgctacttca tttgtgacgc tacaagttgc
    16081 tcgagatgag gaatttagtc cgttgaaaaa taaagaaggc caagacagta tcgaaactgc
    16141 aacaaatgat ttgaaacgta tgaacatgat tgaatagagg taataatatg accaaaagtg
    16201 ctacaaagaa aaaaacgacg ttagaaacat ttaaagaaat gagccctttg tcttttggag
    16261 aagaagttgg taatagcgtc tcgcacggtg tcgcagcatt catcatgtta ttgaccttac
    16321 cttatgcggc tgtatacagt tatgcacatc acggcgtatt gatgtctgtc agtgtgtctg
    16381 tatttgtcat tagcatcttt ttgatgttca tttcatcaac ggtttatcac acgatgcaac
    16441 aagcgtctcc tcataaatat gtgatgcgca tcattgatca cagtatgatt tatgttgcaa
    16501 tcactggtac atatacgcct gtctcacttg tactcgtagg tggttggctt ggttggtcca
    16561 ttatgattat cctttggggt acgacgattt gggggatttt atataaagcc attgcaacga
    16621 aagtgaatcc taagttgagc ttgatgattt atctcattat gggatgggtc ggtgtgattt
    16681 acttacctat catcatcagc caatccaaat ggctattctt tatttttatt ttattaggcg
    16741 gtttggctta tacgataggg gcatggtttt acgcacaaaa aaacagacca tactttcata
    16801 tgatctggca tatatttata ctcattgctt cattatttca tttcataggt attttatatt
    16861 ttatgtaggt gggtgtttgg atgaagccgc attataagct attcatgttt gcactaatgg
    16921 ttttattgct gtttcaagtg tatttcgcat attattactt gttgggagat ggggcgttaa
    16981 cagcatcgcc actcctaggt tgggtatcat taggcttagg tatcctcatt gtcattatca
    17041 tgatttctgt acaccggcaa cataaaaaga acatgtaatc atcatataaa gagactgttc
    17101 cgagacatca atcgttcgtg tagcgaggat tgatgacact ataacagtct cttgtctttt
    17161 atagatagta aatgatgttt taagaaaagg aacatcggaa aa
//
LOCUS       DANHPA010000055        17168 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.055, whole genome shotgun sequence.
ACCESSION   DANHPA010000055 DANHPA010000000
VERSION     DANHPA010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 17168)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17168)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17168
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.055"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            204..1157
                     /locus_tag="PTC28_001435"
     CDS             204..1157
                     /locus_tag="PTC28_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine cyclodeaminase family protein"
                     /protein_id="HDK5716719.1"
                     /translation="MKVFNEATVKNTYKMSDAIQDIEQLFTDMDGIHLAQRTVIPTGD
                     GAKSMLYMPCVHTGRQLGIVKITSITPENPQNGRPTTQGTIIVTDLETGEHVASLDGS
                     YLTRLRTGALSGIATKYLSRENATILGMIGTGGMAFEQLLANIEVRDIDRVILYNRTI
                     SKAENFKSRVLEAFPNLTVEVVDDVKQLVEQADIINCQTQSAEPVFDADTIQLGTHIN
                     GIGSYRPDMKEIDNRILPRADKVFFDDIEGVKEEAGEIIEANEKGIFKFEDVDGDLKA
                     LSLNGTLQRTNDESITVFKCVGAAHFDLAVALGAYERLIQQ"
     gene            complement(1206..1952)
                     /locus_tag="PTC28_001436"
     CDS             complement(1206..1952)
                     /locus_tag="PTC28_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HDK5716720.1"
                     /translation="MTKLFKPTKDFQVIAHRGLSNIYPENTRSAYQAALGKHIDMLEI
                     DLHMTKDQVLVAIHDDTIDRTSTHSGAIKDLTLDELRTYDFGSWKEGCQPEAIMTFDE
                     VLTLTKNYSKTLLIEIKKPKQYPGIEEAVIATIKQHHFPFNRVILQSFDQQSVQKLHQ
                     LAPYIRLGVLLSLRQYRFKQPPLEEIATYAEYANPNFKLINKKLMKRAHQHGLKVMPY
                     TVNRVENAKRLITLGVDGLISDAPHILFKL"
     gene            2027..2485
                     /locus_tag="PTC28_001437"
     CDS             2027..2485
                     /locus_tag="PTC28_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SACOL1771 family peroxiredoxin"
                     /protein_id="HDK5716721.1"
                     /translation="MIEHQFPVQVTWQGGRNEVGQMQGDVIQHRVSIPASLGGIGTGT
                     NPDELLVGAAASCMTISLAATLERAHLTATKIEMNSYGEVQFDRQRFKMNRIVHEPKI
                     YVQDDTQQAQLEKRLSKLLAIADKNCMISNSIRGNVEIEAHPIVIVAAEH"
     gene            2646..3806
                     /locus_tag="PTC28_001438"
     CDS             2646..3806
                     /locus_tag="PTC28_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HDK5716722.1"
                     /translation="MYTHHSLLLTPGPTPIPQRIQAAMNLPMVGHRSPDFEHIAETAF
                     RSLKPIFGSQHDVMILTSSGTSALEASMLNIVNPDDHILVIVSGAFGNRFKQIAETYY
                     EHVHVLQVEWGQALDVNEVITTIQHLDVPITAVFTQYCETSTAVLHPVAELGHALKAH
                     NEHIYFVVDGVSCIGAVDVDLERDQIDVLVSGSQKALMLPPGVAFVAYNDRALARFKS
                     VTTPRFYLDLAKHHASLEAHSTPFTPNVSTFRGVVEYGQMVEEEGFEHVIQRHYLIRD
                     AVRAALRQLELDLLVADDDASPTVTAFIPKDEAELKQIKNELKSQFNITIAGGQGKLK
                     GHILRVGHMGFISPFDLLSFISALEVILTQYRQHSYIGSATKVFLEVIHHEL"
     gene            3796..5391
                     /locus_tag="PTC28_001439"
     CDS             3796..5391
                     /locus_tag="PTC28_001439"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HDK5716723.1"
                     /translation="MSYKVLVADPISVEGLKSLNDDADFEVIHQTGLSEAELIDTIQD
                     YDALIVRSQTTVTADILKAGQKLKVVARAGVGVDNIDTETATKEGIIVINAPDGNTIS
                     ATEHSVAMILSMARNIPQAHASLSHGEWDRKTFRGTELYQKTLGVIGTGRIGTGVAKR
                     LQSFGMRVLAYDPYLSEEKAKELEFTRATVDEIAQQADFVTVHTPLTEKTKGIVNANF
                     FNQAKPNLQIINVARGGIIEENALIDALDQNKIAGAALDVFENEPAIDSPVTKHPKII
                     VTPHLGASTLEAQEKVAVSVAQEIIDIIKHENVANAVNAPSGVFNEDEELKPFVDLAK
                     TTGKVGIQLLPKAPRTLKITYAGDIALDDTSLITRTLVKGVLEQDMGDHVNLINALVL
                     LNEQNVTYTIEKTKKKKGFSNYIELELINKGDVVKIGATVLNGFGPRIVRINDYPVDF
                     KPEHYQLVIHHFDRPGIVGKTGQILGEHGVNIASMHLGRSQIGGDAMMILSIDHPINE
                     TVREALLKIDGFQSVLQVTLDES"
     gene            complement(5443..6567)
                     /locus_tag="PTC28_001440"
     CDS             complement(5443..6567)
                     /locus_tag="PTC28_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDK5716724.1"
                     /translation="MTKAILFDVDGVFLDESRCFDVSALTVYELLYSTDYLGLKSHID
                     LSQLTDVQITDIRATLFKNDVILNRLKSMGINSNWDMLFVVFSVHFIECLKQISHEAR
                     IDFLNSVQFDETTLRKVGQQLTNIIINYERPLQFIENGSEGRSQIYQSLQSYAMTELN
                     VEEATLFDINSPLWQLAQEIYQEWYLGTALYEEVEQKVAKTDYKRGYIYHEIALAPIE
                     DIKQLLTNLKAAGYQLAIATGRPRTETLVPFETLDLLSYFDDAFIVSASEVLEVESRY
                     PELKPLGKPNPFSYIAAFNGNQKQDYYDYATNQTNRMDPEKVTIVGDSLADLFSAQTV
                     NAQFIGTLTGLKGKSAEAELRAHGAEIIVDNVLDIQKVLL"
     gene            complement(6775..7392)
                     /locus_tag="PTC28_001441"
     CDS             complement(6775..7392)
                     /locus_tag="PTC28_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HDK5716725.1"
                     /translation="MLYHIIGKIIELIVVKVLKNLEVIGREHQPKTNRYVVTCNHESY
                     NEIILLGVSLLPNQIHYMAKQELFKNKYFGGLLTRLNAFPVNRENPGPSTLKTPVKLL
                     RDNKIVGIFPQGHRTTGETPLKRGAATIAILAKQPILPAAYVGPTKLLGLFTGKAYIK
                     FGEPIDTTDLPKDLNRQEKVDYVTQQISARTKQLQDELNVYVRNK"
     gene            7547..8818
                     /locus_tag="PTC28_001442"
     CDS             7547..8818
                     /locus_tag="PTC28_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HDK5716726.1"
                     /translation="MRENDNEQQPKEQQEMHQNKQIDDGQRASSYRTSPPPRQPHFPW
                     LKVILVSLLAGILGALIVVGATGGFSNIFPWGNQNGSDVKVASDQKGGNSLDGKSHKY
                     KSVHEMINDQAPAIVGVINEQRAQNLGDLLQGKSAKAEPTGIGSGVVYEKNNGDAFIV
                     TNNHVIEGASSIKVHLHNSKQVDAKLVGTDPLTDIAVLKIKDRDDIKAITFGDSSKVK
                     TGDSVFAMGNPLGLEFANTVTSGIISASERTIEADTSAGANKVTVLQTDAAINPGNSG
                     GALVDIDGNLVGINSMKIAAPQVEGIGFAIPSNEVKLIIGELVKHGEVKRPSIGIGMI
                     NVADIPEQYKTNSGVDSGVYVAQVQRRGIDIEKGDIIVSIDGHKVENDTDLRSYLYKD
                     KKPGDHITLKINRNGKTKDVDVTLTESNSSS"
     gene            complement(8872..10134)
                     /locus_tag="PTC28_001443"
     CDS             complement(8872..10134)
                     /locus_tag="PTC28_001443"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HDK5716727.1"
                     /translation="MANALLEELSWRGLVYQQTDEEGIETLLNKEEVKIYCGADPTAD
                     SLHIGHLLPYLTLRRFQEAGHRPIVLVGGGTGMIGDPSGKSEERVLQTEAQVDKNVRG
                     IQQQMEQLFDFNVENGPILVNNYDWLSQISLIEFLRDYGKHVGVNYMLGKDSIQSRLE
                     NGISYTEFTYTILQAIDFGHLNRVHDCKLQIGGSDQWGNITSGIELMRRMYGVTDVYG
                     FTIPLVTKADGKKFGKSESGTIWLDPEKTSPYEFYQFWINTSDDDVIKFLKYFTFLSK
                     TDIEALEKSVVEEPHLRKAQTTLAEEVTRFIHGNDALAEAQRISQALFKGDLKSLSAE
                     EIKAGFKDVPQVTLSNETTNIVDALVETKISSSKRQAREDITNGAIYINGERQQDLAY
                     TLSSDDRYDDTFTIIRRGKKKYFMVNYQ"
     gene            10480..11379
                     /locus_tag="PTC28_001444"
     CDS             10480..11379
                     /locus_tag="PTC28_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HDK5716728.1"
                     /translation="MKTKEQRDLTTHTSFARYDFYMRKTKQFIISFVLFMLIGLIFVC
                     GLLLGYFASIVSDSKSLNDHDLVQQVTRLPELDNDQPDNTDYIALYNEQEPSLIAGPA
                     EVSPYVTKALVASEDADFYVHHGVLPKAILRAMFQDIFDTQFPTGGSTITQQLIKNQV
                     LTKERTYDRKAKEIMYAMRIEHILTKDEIIYTYLNLVPFGLDTNGQNVTGITSASYGL
                     FGKPPKTLNLAESAYLIGLLQSPYAYTPFNHDGSLKHEDDVIFSIHRQHYVLKRMLVE
                     QMISKDAYDKAVHYDIYAHLYDE"
     gene            complement(11454..13121)
                     /locus_tag="PTC28_001445"
     CDS             complement(11454..13121)
                     /locus_tag="PTC28_001445"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HDK5716729.1"
                     /translation="MSHLSDLEIANQSTLRPIKEIAEKAGISEEALEQYGHYKAKIDI
                     SKIQTQNGKGKVVLVTAMSPTPAGEGKSTVTVGLADAFQHINQNVMVALREPALGPTF
                     GIKGGATGGGYAQVLPMEDINLHFNGDFHAITTANNALSAFIDNHIHQGNELGIDQRR
                     IEWKRVLDMNDRALRQVIVGIGGPTQGVPREDGFNITVASEIMAILCLSTGIKDLKES
                     ISKITIGYTRDRQPVTVKDLGVEGALAMILKDAIKPNLVQSIEGTPALIHGGPFANIA
                     HGCNSIIATETARDLADIVVTEAGFGSDLGAEKFLNIKSRKANFEPDAVVIVATIRAL
                     KMHGGVAKDQLKEENVVALKAGIKNLERHVENIRKFGVEPVVALNAFIHDTDAEFEFV
                     QQWAKENGVRLSLTEVWEKGGKGGTDLAEKVLEVIREPKQFKRLYELEMPLEEKIEKI
                     VKEIYGGSKVTFTSKAQKQLAQFKANGWDHYPVCMAKTQYSFSDDQTQLGAPSDFEIT
                     IRELEAKTGAGFIVALTGAIMTMPGLPKKPAALKMDITEDGHAIGLF"
     gene            complement(13437..15146)
                     /gene="acsA"
                     /locus_tag="PTC28_001446"
     CDS             complement(13437..15146)
                     /gene="acsA"
                     /locus_tag="PTC28_001446"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002510208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HDK5716730.1"
                     /translation="MKVEVYKGEQGNFNLTNYQATYDQFDWKEVEKVFSWNETGKINM
                     AYECIDRHVNEGKADKIALNYKDNRRKESYTFKDLQEKSNQAANVLKNKANVQKGDRV
                     FIFMPRTPELYFAFFGILKLGGIVGPLFEAFMEKAVKDRLENSDAKVIITTNSLLSRI
                     PQEQLPNLETIVIVDDEVDVKYVDFNKALATASTAFNIEWLDREDGLILHYTSGSTGQ
                     PKGVLHVQEAMLLHYISGKYVLDFQEDDVYWCTADPGWVTGTSYGIFSPWLHGVTNCI
                     AGGRFSPENWYAMIEDFKVTIWYTAPTALRMLMSAGDDLVEKYDLSSVRSILSVGEPL
                     NPEVIKWAKKVYGKRVLDTWWMTETGGHMIVNYLAEDIKLGSMGKPLPGIEAAIIDNE
                     GNVLPPNRMGNLAVKKGWPSMMRQVWKNPEKYQSYFIGDWYVSGDSAYQDEDGYFWFQ
                     GRVDDVIMTAGERVGPFEVESKLVEHEAVAEAGVIGKPDPVRGEIIKAFVALRQGYEP
                     SDDLKEDIRKFVKEGLAAHAAPREIEFKDKLPKTRSGKIMRRVLKAWELDLPTGDLST
                     MED"
     gene            15313..15945
                     /locus_tag="PTC28_001447"
     CDS             15313..15945
                     /locus_tag="PTC28_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003229296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDK5716731.1"
                     /translation="MKHIKTYEHESYTVDGQTFIIEGPVSKTQLQTYSFDEGLDAFRI
                     PIEQFEAIQDISTLDEGRIYIIRKENHIIGYVTYLYPDPMERWSEGQLPYLLELGAIE
                     ISLAYRGLGLGRMLLKVSTRSPELEDYIIITTEYYWHWDLKNSKLDVFEYKKLMQRMM
                     SNGGLEVFATDDPEITSHPANCLMARIGKNITVDQMEAFDDIRFMNRFFF"
     gene            15959..17116
                     /locus_tag="PTC28_001448"
     CDS             15959..17116
                     /locus_tag="PTC28_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoin utilization protein AcuC"
                     /protein_id="HDK5716732.1"
                     /translation="MPNHSQQETGYVYSDALLRYRFHNKHPFNQMRVKLTTELLLSTG
                     YLSESQIITPRQATIDEIAMVHKYDYIQAVMRGEKNLLTPDEQQKYGLDDEDTHVFSR
                     IHRSTATIIGGGLNLVDAIMEGKFRNGCHLAGGLHHAHEGRASGFCVYNDAAIYIKYL
                     NEKYQQRVLYIDTDAHHGDGVQWTFYASNQVMNYSIHETGKFLFPGSGHYTERGTDQG
                     FGYSINVPLEPYTEHDSFLEVFKKTLNQVAESFQPDFIVSVNGSDIHYLDPLTHMSCD
                     LNTLYQIPYIITEVAEKYCGGKQIMLGGGGYNIWRVVPRAWSHIYLSLIHQPRLHGRL
                     PEDWLNKWRHYSPVPIPEYWEEQYDDYQDIPRRPEIAKQNNQVAENILSWF"
BASE COUNT         5244 a         3505 c         3147 g         5272 t
ORIGIN      
        1 ataaaggttg tctcattgac gctcttttgt agtgcgactt gtaaatgtga gacattaatg
       61 ttcaaacctc aaattgttta aacacaaata tctcatatct caacccacaa atgataacct
      121 tcaagcgaaa cttgctcttt ttacatcatg tcgtatttcc actatactga taatgaactt
      181 aacgaaggag gcgtgcagaa ctgatgaaag tttttaatga agcaacagtg aaaaatactt
      241 acaaaatgtc tgatgcgatt caagacattg aacaattatt tacagatatg gatggcattc
      301 atctcgctca acgaactgtg attccaacag gtgatggcgc aaaatcgatg ctttacatgc
      361 cttgtgttca taccggacgc caactgggta ttgtgaaaat cacgtcgatt acgccagaaa
      421 acccgcaaaa tggtcgacca acaacacaag gtactatcat tgtgactgac cttgaaacgg
      481 gtgaacatgt tgcaagcttg gatgggagtt atttaacgcg tttacgtaca ggcgcgctca
      541 gtggtattgc gacgaaatat ttaagccgtg aaaacgcgac aatattaggt atgattggca
      601 caggtggtat ggcattcgag caactacttg caaatattga agtgcgagac attgatcgcg
      661 ttattctcta taaccgtacc atttctaaag cagaaaattt taaatcacga gtgctagagg
      721 catttccaaa tttaactgtt gaagtggttg atgatgtgaa gcaacttgtc gaacaagcag
      781 acattattaa ctgccaaacc caatctgctg aacccgtttt tgatgcggat acgattcaac
      841 taggaacgca cattaatggc attggttcgt atcgtcctga tatgaaagaa attgataatc
      901 gtatcttacc gagagcagat aaagtctttt ttgatgatat tgaaggcgtc aaagaagaag
      961 ctggtgaaat cattgaagcg aatgaaaaag gtatttttaa atttgaagat gtcgacggtg
     1021 atttaaaagc attgtcactg aatggcacac ttcaacgcac aaatgacgag agtatcacag
     1081 tgttcaaatg cgtcggtgca gcacatttcg atcttgctgt cgctttaggt gcatatgaac
     1141 gtttaattca acagtaatga ttcaagggca cgcatctttt aattggatgt gacgcccttg
     1201 ttctattaca acttaaataa tatatgcggg gcatcggaaa tcagtccatc tacccctaat
     1261 gtaatgagtc gtttcgcatt ttccacccga ttcacggtat aaggcattac ttttaatcca
     1321 tgctgatgtg cccgcttcat caatttttta ttaatcaatt tgaagttagg attcgcatat
     1381 tcagcatatg tcgcaatctc ctctaatggc ggttgtttaa aacgatattg acgtaaactg
     1441 agtaacacac ctaatcgaat gtacggcgcc aattgatgta atttttggac actttgttgg
     1501 tcgaatgact gtaaaataac ccgattaaac ggaaagtgat gttgtttaat cgtcgcaata
     1561 accgcttctt caatacctgg atattgcttg ggttttttaa tttcgatgag caatgtttta
     1621 gaatagtttt tcgttaacgt cagcacctca tcaaatgtca tgattgcttc aggttgacag
     1681 ccctctttcc aacttccaaa gtcatacgtc cgcaattcat ccaacgttaa atctttaatc
     1741 gcacctgaat gagtagaagt gcggtcaatg gtatcatcat gaattgctac gaggacttga
     1801 tctttggtca tatgtaaatc tatttctaac atgtcaatat gcttccctaa cgcggcttga
     1861 taggctgaac gcgtattttc aggataaatg tttgaaagac cacgatgcgc aatcacttga
     1921 aagtctttcg ttggtttaaa caatttggtc ataagagtct tcctttcaat tctatcttct
     1981 ttctactaca cttaacttaa cataaatgat aaaggagtga agtgttttga ttgaacatca
     2041 atttccagta caagtcacat ggcaaggtgg tcgcaatgaa gtcggccaaa tgcaaggtga
     2101 cgttattcaa catcgcgtct caattcccgc ttcactcggt ggcattggaa caggtacaaa
     2161 tcctgacgaa cttctcgtgg gtgctgccgc aagttgtatg acgatttctt tagcagctac
     2221 gttagaacgt gcacacctca ccgctactaa aattgagatg aatagttacg gcgaagtaca
     2281 atttgatcgg caacgcttta aaatgaaccg tattgtgcat gaacctaaaa tttatgtaca
     2341 agatgacacc caacaagcac aactagaaaa gcgtttatcg aagctgcttg cgattgcgga
     2401 taaaaattgt atgatttcca atagcatcag aggtaacgtc gaaattgaag cgcatcctat
     2461 tgtcattgta gccgctgaac attaatttta aaccatactg agtcatcttt cgcaagctcg
     2521 gtatggtctc tttaaaagta ttttcttcaa atgccatgat gatttacaga attttcacat
     2581 cttctatcta ttaatatgtc agaaaatttg gtaaaatgta aaaatattac tggaggaggt
     2641 tttctatgta tactcatcat tcattacttt taacacctgg tcctacccct atcccccaac
     2701 gtatccaagc cgcaatgaat ttacccatgg tgggacatcg ttcacctgac tttgaacata
     2761 ttgctgagac tgcatttcgt tcattaaaac cgattttcgg cagtcaacat gatgtcatga
     2821 tcttaacgtc gagtggtacg agtgcattag aagcaagtat gttgaatatc gtcaatcctg
     2881 atgatcacat tctcgtcatt gtgtcaggcg cattcggtaa tcgtttcaaa caaattgcag
     2941 aaacgtatta cgaacacgtc cacgtccttc aagttgaatg gggtcaagcg ctcgatgtca
     3001 acgaagtgat cacaacgatt caacatcttg atgtccccat tactgcagta ttcactcagt
     3061 attgtgaaac gtcgacagct gtccttcacc ctgtagctga actcggacat gcattgaaag
     3121 ctcacaatga gcacatttat ttcgtcgtgg atggtgtgag ttgtatcggt gcagtagatg
     3181 ttgaccttga acgtgatcaa atcgatgtgc tcgtttctgg cagtcaaaag gcgttaatgt
     3241 tgcctcccgg tgtcgctttt gtagcatata atgatcgcgc attggcacgt ttcaaatcag
     3301 taacgacccc acgtttttat ttagacttag cgaaacatca cgcttcatta gaggcgcatt
     3361 cgacaccatt tacccctaac gtgtcgactt ttagaggggt cgttgaatat ggacagatgg
     3421 ttgaagaaga aggatttgaa cacgtgattc aacgccacta tttgattaga gatgctgtgc
     3481 gcgcggcatt gcgacaattg gaattggatt tacttgttgc tgatgatgat gcatccccta
     3541 ctgtcacagc ctttataccg aaagatgaag cagaattaaa acagattaaa aatgaattaa
     3601 agtcacaatt caacattacg attgcagggg gacaaggtaa attaaaaggc cacattttac
     3661 gtgtcggtca tatgggcttt atttcgccat ttgatttatt atcttttatc tcagcactcg
     3721 aagttatttt aacccagtat cgccagcatt cgtatattgg tagtgcaaca aaagtatttt
     3781 tggaggttat tcatcatgag ttataaagtt ttagtcgcgg accctatttc agtagaaggg
     3841 ttaaaaagtt taaatgacga tgccgatttt gaagtcatcc accaaacagg tttatctgaa
     3901 gcagaattaa tcgatactat tcaagactat gatgctctaa ttgttcgaag ccaaacgaca
     3961 gtgactgcgg acattttgaa agcaggccaa aaattaaaag ttgttgctcg cgcgggtgtc
     4021 ggtgtcgaca atatcgatac ggaaactgcg acaaaagaag gtattatcgt cattaatgca
     4081 cctgatggca atacgatttc tgctacagaa cattctgtcg ctatgatttt aagtatggca
     4141 cggaatattc cacaagccca cgcttcactt agtcatggtg aatgggatcg taaaacattt
     4201 cgtgggactg aattgtatca aaaaacgctc ggtgtcattg gtaccggtcg tatcggtaca
     4261 ggtgtcgcaa aacgtttaca aagctttggg atgcgcgttc tagcctatga tccttattta
     4321 agtgaggaaa aagcgaaaga gttagaattt acgagagcaa cagtagatga aatcgcacaa
     4381 caagcagact ttgtgaccgt gcatacaccg cttacagaaa aaacaaaagg gatcgttaat
     4441 gctaactttt tcaatcaagc caagccgaac ttgcagatta ttaacgtagc acgtggcggt
     4501 atcattgaag aaaatgcatt aattgatgcg ttagatcaaa acaaaattgc cggtgctgca
     4561 ttggatgtct ttgaaaacga acctgcaatt gattcaccgg taacgaaaca cccaaaaatc
     4621 attgtcacac ctcatttagg cgcgtctaca cttgaggcac aagaaaaagt agcggtgtct
     4681 gttgcacagg aaattatcga cattattaaa catgaaaatg tcgccaacgc agtcaatgcg
     4741 ccaagtggtg tattcaatga agatgaagag cttaaacctt ttgtcgattt ggctaaaacg
     4801 acaggtaaag tcggcattca actccttcca aaagcccctc gtacgcttaa gattacatat
     4861 gcgggcgaca tcgcgttaga tgatacaagt ctcatcacgc ggacactcgt taaaggtgta
     4921 ctcgaacaag atatgggcga tcacgtgaac ttaattaatg cgctcgtgtt attaaatgaa
     4981 caaaatgtga cgtatacgat tgaaaaaacg aaaaagaaaa aaggattcag taattatatc
     5041 gagctagaac tcatcaataa aggagatgtg gtgaagattg gtgcaacggt attaaatggt
     5101 tttggtcctc gcatagtacg gattaatgac tatcctgttg actttaaacc ggaacattat
     5161 cagctcgtta tccatcattt tgaccgccct ggcattgtcg gtaaaacagg acaaatttta
     5221 ggtgagcacg gtgtcaacat tgcttctatg catttaggtc gttctcaaat tggtggcgat
     5281 gcgatgatga tcttatctat cgaccatccg attaacgaaa ctgttcgtga agcattatta
     5341 aaaatcgacg gcttccaaag cgttttacaa gtcacactag atgaatcata aatttcatga
     5401 gtagaggctg ggaaaattgt gttcccagcc tcttcgttat cattataata agactttttg
     5461 aatgtctaac acattatcga cgatgatttc cgctccgtgt gcccttaatt ctgcttcagc
     5521 ggacttccct ttcaagcccg tcaatgtccc gataaattgt gcattaactg tttgcgcact
     5581 gaacaaatcc gcaagtgaat cgccgacaat cgtgactttc tcaggatcca ttcgattcgt
     5641 ttggttcgta gcataatcgt aatagtcttg tttttgatta ccattgaatg ctgcaatata
     5701 actaaatggg ttcggctttc cgagtggttt taactccgga tatcgtgatt ccacctctaa
     5761 cacttcactc gctgaaacaa taaacgcgtc atcaaaatag gacaataaat ccaatgtttc
     5821 aaaaggcaca agcgtttctg ttcgtggtcg ccctgtcgcg atagccaatt ggtaacctgc
     5881 cgcttttaaa tttgttaaca actgtttgat atcctctatc ggtgccaatg cgatttcatg
     5941 ataaatgtat ccgcgcttat aatcggtttt cgctactttt tgttcaactt cttcataaag
     6001 tgctgtccct agataccact cttgataaat ttcttgtgct aactgccata acggactatt
     6061 aatatcaaaa agtgttgctt cctcaacatt aagttctgtc atcgcataac tttgtagtga
     6121 ttgataaatt tgtgaacgtc cttctgaacc attttcaata aattgaagcg gtcgttcata
     6181 attgataatg atatttgtaa gttgttgacc aactttccgc aaagtcgtct catcgaattg
     6241 tacagaattt aaaaaatcta tgcgtgcctc atgtgatatc tgttttaaac attcaataaa
     6301 atgcaccgaa aacactacaa ataacatatc ccagttcgaa tttatcccca tagattttaa
     6361 ccggtttaaa atcacatcgt ttttaaataa tgttgcacga atgtcagtga tttgtacgtc
     6421 cgtcaactgt gacaaatcta tatgtgactt taatcccaaa taatccgtac tatataacaa
     6481 ttcgtacacc gttaaagctg aaacgtcaaa acaacgtgat tcatctaaaa acacgccatc
     6541 cacgtcaaaa agtatcgctt tcgtcatact tagaccctcc attgcagaaa attcagataa
     6601 aaacattata acatgaatga ctcaagatgc gtaaacatga ttttacacac caagaatttc
     6661 catcttgtta tggtacaatc attcatgaga aacacccaca ctatccaatt tgatatgaca
     6721 ttgaaaaata aaaatagcga tacaagtcat cataactcat atcgctttat catcttattt
     6781 atttcttaca taaacattta attcgtcttg caactgtttc gtacgcgcac tgatttgctg
     6841 cgtcacataa tccactttct cttggcggtt caaatctttt ggaagatctg tcgtatcaat
     6901 cggttcgcca aacttaatgt aagctttacc agtaaataaa ccgagcaatt tcgttggacc
     6961 aacataggca gctggtaaaa tcggttgttt cgctaaaatc gcaatcgtcg cagcaccacg
     7021 ttttaaaggt gtttctcctg tcgtacgatg cccttgtgga aaaataccta caattttatt
     7081 gtctcttaat aattttaccg gtgttttcaa agtacttggc ccaggatttt cacgatttac
     7141 tggaaaggca tttaatcgtg ttaataatcc gccaaaatat ttgtttttaa ataactcttg
     7201 ctttgccatg tagtgaattt gatttggcaa taatgataca cctaacaata tgatttcgtt
     7261 ataactttca tgattacacg tcacgacata acgattcgtc ttaggttgat gttctcgccc
     7321 tatcacttct aaatttttca aaactttcac tacgataagc tcaatgatct tgccgataat
     7381 atgatataac atgttcacac ctgcttttac tttagattaa tcctttaaat tctatcatct
     7441 ccataccttt tcaacaagca ttctctaaaa tcggtctaaa gttggatagt atcctactgg
     7501 taaatcgttg aaaaatttat cataatatga ttaaaggagg aattttatgc gagaaaacga
     7561 taatgaacaa caacctaaag aacaacaaga aatgcatcaa aacaaacaga tagatgatgg
     7621 tcaacgtgct tcatcttatc gtacgtcacc ccctccaagg caacctcatt tcccatggct
     7681 taaagtgatt ctcgtttcac tacttgctgg tattttaggt gcgctcattg tagtcggggc
     7741 tacgggcggc ttttcaaaca tctttccttg gggcaatcaa aatggctcgg atgtcaaagt
     7801 agcaagcgat caaaaaggtg gtaattcgct tgatggcaaa agtcataaat acaaatcagt
     7861 gcacgagatg atcaatgacc aagcacccgc cattgtaggt gtcatcaacg aacaacgcgc
     7921 ccaaaattta ggtgatttat tacaaggcaa atctgctaaa gctgaaccca caggtatcgg
     7981 ttcgggtgtc gtttatgaaa aaaataatgg cgatgccttt atagttacaa acaaccatgt
     8041 tattgaaggt gcttcttcaa ttaaagttca tttacacaat tctaaacaag tcgatgcgaa
     8101 acttgtcggt acagacccat tgacagatat tgcagtactt aaaattaaag acagagacga
     8161 tattaaagca atcacatttg gcgattcatc aaaagttaaa acaggcgatt ctgttttcgc
     8221 gatgggtaat ccacttggac tcgaatttgc gaataccgtg acttcaggta ttatttctgc
     8281 aagtgaacga acaattgaag cggatacgtc tgcaggtgca aacaaagtga cagtgcttca
     8341 aacagatgca gcgattaacc ctggtaactc aggcggtgca ttagttgata ttgatggtaa
     8401 ccttgtcggt attaactcaa tgaaaattgc agcaccacaa gttgaaggta ttgggtttgc
     8461 gattccaagt aatgaagtga aattgattat tggtgaactc gtgaaacacg gtgaagtcaa
     8521 acgtccttct atcggtatcg gcatgattaa tgttgcggat attccagaac aatataaaac
     8581 aaatagtggc gtagattctg gtgtgtatgt tgcgcaagta caaagacgtg gcattgatat
     8641 tgaaaaaggc gacatcatcg tttccataga cggccataaa gtcgaaaatg atacagattt
     8701 aagatcttat ctctacaaag ataaaaaacc tggtgatcat attacactca aaatcaaccg
     8761 taatggtaaa acaaaagatg ttgatgttac attaacagaa tcaaattcat cttcataaaa
     8821 ggtataaagg ctgggacgca attgaaagct tcccagcctt tatcttatct attattgata
     8881 attcaccata aaatattttt tcttcccacg acgaataatc gtaaatgtat catcataacg
     8941 gtcatcgctt gataatgtat acgctaagtc ttgttgacgt tcaccattaa tataaatcgc
     9001 accgttcgta atatcttcac gcgcttgacg ttttgaagaa gaaatttttg tttccactaa
     9061 cgcgtccact atatttgtcg tctcattgga taatgtcact tgagggacgt ctttgaaacc
     9121 tgctttaatc tcttccgctg ataatgattt caagtcacct ttgaataagg cttgtgaaat
     9181 acgttgtgct tcggctagcg cgtcgttacc gtgaatgaaa cgtgtcacct cttcagcaag
     9241 tgtcgtttgt gcttttctta aatggggttc ttctacaaca gatttttcta aagcttcaat
     9301 gtctgtttta gataaaaatg taaagtattt taagaacttg atcacatcat cgtcactagt
     9361 attaatccaa aattgataaa attcatatgg gcttgttttt tcaggatcta accaaatcgt
     9421 accagattca gatttcccga actttttacc gtcagctttt gtcactaatg gaatcgtaaa
     9481 cccataaaca tccgtcacgc cgtacatacg acgcattaat tcgataccac tcgtaatgtt
     9541 accccattga tctgatccac caatttgaag tttacagtca tgtacgcgat tcaaatgacc
     9601 aaagtcgatc gcttgcaaaa tggtatacgt aaattcagtg tatgaaatac cattttcaag
     9661 acgtgattga attgaatctt taccgagcat gtaattcaca ccgacatgtt taccgtaatc
     9721 acgtaaaaat tcgattaatg aaatttggct caaccaatca tagttgttaa ctaaaatcgg
     9781 accattttca acattgaaat caaacagttg ctccatttgc tgttgaatgc cgcgaacgtt
     9841 tttatcaact tgcgcttctg tttggagtac acgttcttca gatttaccag acggatcacc
     9901 aatcatacct gtaccgccac ccaccaacac aatcggacga tgaccagctt cttgaaaacg
     9961 acgtaatgtt aaataaggta ataaatgccc gatatgcaaa ctatcagcag ttggatctgc
    10021 gccacaataa attttcactt cttctttatt taaaagtgtt tctatgccct cttcatctgt
    10081 ttgttgataa acgagacctc tccaacttaa ttcttctaac aatgcatttg ccataaaata
    10141 acctccttaa aaataaaaaa acaccactta catcgacgta agggcgcaat ttgcacggta
    10201 ccaccatact tggaactctt acaatgatac gttcattgct aacgttgaaa tctgtagctg
    10261 aggtgtattc ataaatatgc gattatcagt tcacagcgac cactgactct cttaaaatct
    10321 acaaatttat tacttgtcct cgatttcaat gcttaatgtg attgctattc attatataga
    10381 tttataattt taaagtcaat catcaaatgt caatctattt ctactcacat ttttaaatat
    10441 gatatactgt tgataaaaat aaaaggaggc ttgtgactga tgaagacaaa agaacaacgt
    10501 gatttaacaa cgcatacttc attcgctcgc tatgactttt acatgcgaaa aacgaaacaa
    10561 ttcatcatct cgttcgttct tttcatgctc atcggtttaa tttttgtgtg cggcttatta
    10621 ctcggctatt ttgcaagtat tgtgtcagat tcaaaatcac tgaatgatca tgacctagtc
    10681 caacaagtca cacgcctccc agaacttgat aacgaccaac ctgacaacac agattacatt
    10741 gcactctata acgaacaaga accgagctta atcgcaggac ctgcagaagt ctcgccctat
    10801 gtgacaaaag cattagttgc ttcagaagac gctgattttt atgtgcatca tggtgtatta
    10861 ccaaaagcga tattaagagc gatgttccaa gatatttttg atacccaatt cccaacaggt
    10921 ggcagtacga ttacacaaca actgattaaa aaccaagtcc tcacaaaaga acggacatat
    10981 gatcgtaaag caaaagagat tatgtatgcg atgagaattg aacacatttt aacgaaagat
    11041 gaaatcattt atacgtattt gaatcttgtg ccttttggac tcgacacgaa cggccaaaat
    11101 gtgacaggaa tcacttcagc gtcatacggt ttattcggca aacctcctaa aacattgaac
    11161 ttagctgaat cggcttattt gataggatta ttgcaaagtc cctacgccta tacaccattc
    11221 aatcatgacg gttcacttaa acatgaagat gacgtcattt tttcaatcca tcgtcaacat
    11281 tacgttttga agcggatgtt agtagaacag atgatttcta aagatgcata tgacaaagca
    11341 gtccattacg atatttatgc acatttgtat gatgaataac cattaaagaa aaggtctagg
    11401 ttatatttca acctagacct ttcgtttgac attcacttca ttcacgttaa gaattagaat
    11461 aatcctatcg catggccgtc ttctgttatg tccattttta gtgctgctgg ttttttcggt
    11521 aatcctggca ttgtcataat ggcacctgtt aacgcaacga taaagcccgc acctgtttta
    11581 gcttcgagtt cacgaatcgt aatttcaaaa tcagatggtg caccgagttg tgtttgatca
    11641 tccgagaatg aatattgcgt ttttgccata catactggat aatgatccca accgttcgct
    11701 ttaaactgcg ccaattgttt ttgtgctttt gatgtaaacg taactttaga accaccgtaa
    11761 atctctttaa caattttttc gattttttct tcaagcggca tttcgagttc atataggcgt
    11821 ttgaattgtt tcggttcgcg gatgacttca agcacttttt ctgctaaatc cgtcccccct
    11881 ttaccacctt tttcccatac ttctgttaac gataaacgta caccattctc ttttgcccat
    11941 tgttgtacga attcaaattc agcatccgta tcatgaatga atgcattgag tgcaacaaca
    12001 ggttcaacac cgaatttgcg aatattttca acgtgacgtt ctaagttttt aatccctgct
    12061 ttaagtgcaa cgacattttc ttcttttagc tgatctttag cgacgccccc atgcatttta
    12121 agcgcacgaa tcgttgcaac aatcacgact gcatctggtt caaaattggc tttacgtgat
    12181 ttaatattca agaatttttc agcccctaaa tcagaaccaa aaccagcctc tgtcacgacg
    12241 atatctgcca aatcacgtgc tgtttctgtt gcgataattg agttacagcc gtgcgcaatg
    12301 ttcgcaaaag gtccaccgtg aatcaatgca ggtgtccctt cgatgctttg tacaaggttc
    12361 ggtttaatcg catcttttaa aatcatagct aacgcgcctt ctacacctaa atctttaaca
    12421 gtgacaggtt gacggtcacg tgtataacca atcgtaattt tcgaaatact ttctttaaga
    12481 tctttgatac ctgtacttaa acaaagaatc gccataattt ctgaagctac agtaatattg
    12541 aaaccatctt ctcgagggac cccttgtgta ggaccaccaa taccgacgat cacttgacgc
    12601 aacgcacggt cgttcatatc taacacacgt ttccactcaa tacgacgctg atcaataccg
    12661 agttcgttac cttgatgaat atggttatct ataaaagctg agagtgcatt attcgctgtt
    12721 gtaattgcat ggaaatcacc attaaagtgc aagttaatat cttccattgg gagcacttgt
    12781 gcgtatccac cgcccgtagc gccaccttta ataccgaacg ttggtccaag tgctggttca
    12841 cgtaaagcga ccatcacgtt ttgattgatg tgttggaatg catcagctaa gccgactgtc
    12901 actgttgatt tcccttctcc agcaggtgtt gggctcatcg ctgtcacaag aacgactttc
    12961 ccttttccat tttgagtttg aattttggaa atatcaattt ttgctttgta gtgtccatat
    13021 tgttcgagcg cttcttcgga aatccctgct ttttcagcaa tctccttaat tggtcttaat
    13081 gttgattgat ttgcaatttc taaatctgat aaatgactca cattattcaa ccccttaatc
    13141 aatttgagaa atgatggcgt tatgtaaacg catacaaata aagtatatca agttctttca
    13201 atttttatca taacgaacaa tggggtgatt gtcgaacaaa aacagggaga cttcttttta
    13261 atttaacgct tctttcaaac gatcgatttg cgtcattatt aaacaacgac atgtgtaaca
    13321 tataaagcta cgttgtatac cgatgacacc ttcttacgtg attggtgatt gctcttttaa
    13381 aatttaaaaa ggcctagaca tcaaaatagt ccaagccctt tcatagttgt tttgtcttaa
    13441 tcttccattg tacttaaatc accagtcggt aaatcgagct cccatgcctt taacacacgg
    13501 cgcataattt tacctgaacg tgttttcggt aatttatctt taaattcaat ttctctcggt
    13561 gcagcatgag cagctaaccc ttctttaaca aatttacgaa tatcttcttt taagtcatca
    13621 gaaggttcat acccttgacg taatgcgacg aatgctttaa tgatttcacc acgcactgga
    13681 tcaggtttac caatgacacc cgcttctgcc actgcttcat gttccactaa tttagattcc
    13741 acttcaaatg gaccgacacg ttcaccagca gtcataatca catcatcgac tcgaccttgg
    13801 aaccagaaat aaccatcttc atcttggtaa gcagagtcac cagatacata ccaatcacca
    13861 ataaagtatg attgatactt ttcaggattt ttccaaactt gacgcatcat agaaggccaa
    13921 ccttttttaa ccgctaagtt acccatgcga ttcggtggta aaacgttacc ttcattatcg
    13981 ataattgccg cttcaatacc aggcagcggt ttacccattg aaccgagctt aatatcttct
    14041 gccaagtaat tcacaatcat atgtccccca gtttcagtca tccaccacgt atctagtaca
    14101 cgtttaccat agaccttttt cgcccatttg atgacttctg gattgagggg ctccccaaca
    14161 gataaaatgc tacgtacaga cgataaatca tacttttcga ctaagtcatc acctgcactc
    14221 atgagcatac gtaacgctgt cggtgcagta taccaaatcg tgactttaaa gtcttcaatc
    14281 attgcgtacc aattctctgg tgaaaaacga cctccagcga tacagttcgt tacaccgtgc
    14341 agccatggtg agaaaatgcc ataagatgtg cctgtcaccc aacctgggtc agcagtacac
    14401 caatacacgt catcttcttg aaaatcgagt acgtatttac ccgaaatgta atgcaacaac
    14461 attgcttctt gaacatgcaa tacccctttt ggctgacctg ttgaaccaga tgtataatgt
    14521 aaaatcaagc catcttcacg gtctaaccat tctatattaa acgctgtcga tgcggttgcc
    14581 aatgctttat taaagtctac atatttcaca tcaacttcat catcgacaat aacaatcgtt
    14641 tctaaatttg gcagttgctc ttggggaata cgcgataata aactatttgt cgtaataatg
    14701 actttcgcat cactattttc caaacggtct ttcactgcct tttccataaa tgcttcaaat
    14761 aaaggaccta caataccgcc caattttaag atgccaaaaa atgcaaaata aagttctggt
    14821 gtacgaggca taaaaatgaa gacacgatcc cctttttgta cattcgcctt atttttcaac
    14881 acattggcag cttggttcga tttttcttgt aaatctttaa atgtatagct ttcttttcgt
    14941 cgattatctt tataatttaa agcaatttta tctgcttttc cttcattgac atgacgatcg
    15001 atacattcat atgccatgtt gatttttcca gtttcgttcc aagaaaatac tttctctacc
    15061 tctttccaat caaactgatc atatgttgct tgataattag ttaaattgaa gttgccttgc
    15121 tcccctttgt aaacttcgac tttcatcaca agaaccccct tgcattatgt aatcgctttc
    15181 aaaactaata tcattatacc ctacacgcgt attgttttca aaaaattgta cttattcaga
    15241 atttaaggtg aaattaagta agcgttgtca tataataacg atagtgcaat atgtaagaaa
    15301 ggagatgtgc ccatgaaaca tattaaaacc tatgaacatg aaagctatac agttgatggt
    15361 caaactttta tcattgaagg cccggtttct aaaacacaat tacaaactta ttcttttgac
    15421 gagggtcttg acgcatttcg aattcctatc gagcaatttg aggcgataca ggatatcagt
    15481 acgttagatg aggggcgcat ttatatcatt cgaaaagaaa atcacatcat cggttacgtg
    15541 acgtatttat atccggaccc tatggagagg tggtctgaag gtcaacttcc ctatttgtta
    15601 gaactcggtg cgattgaaat cagtttagcg tatcgtggat taggtttggg acgcatgttg
    15661 ttaaaagtaa gcacacggag tcctgaatta gaagattata ttatcattac gacagagtat
    15721 tattggcatt gggatttgaa aaactcaaaa ttagacgttt ttgaatacaa aaaattaatg
    15781 cagcggatga tgtcgaatgg tggcttagaa gtatttgcga ctgacgaccc tgaaattaca
    15841 agtcaccctg ctaactgttt aatggcacgt attggcaaga acatcacagt cgaccaaatg
    15901 gaagcttttg atgatattag gtttatgaat cgtttctttt tctaaggggg gatgtgatat
    15961 gccaaatcat tcacaacaag aaacggggta tgtttattct gatgccttac tgcgttatcg
    16021 cttccataat aaacatccat ttaatcaaat gcgggttaaa ctaacgacag aactcttgct
    16081 atcgacagga tatttatctg aatcacaaat tattacgcca agacaagcca ctattgatga
    16141 aattgcgatg gttcacaaat atgattacat tcaagcagtg atgcgtggtg aaaaaaatct
    16201 actcactcct gatgaacaac aaaaatacgg cttagatgat gaagatacac atgtcttttc
    16261 tcgcattcat cggagtactg cgaccattat cggcggtggc ttaaatttag ttgatgccat
    16321 tatggaaggc aagtttcgca atggctgtca tttagctggc ggtttacacc atgcacatga
    16381 aggacgcgcg agtggctttt gtgtctacaa tgatgcagcg atttatatta aatatttaaa
    16441 tgaaaaatat caacagcgcg tactttatat cgatacagat gcccatcacg gtgacggcgt
    16501 gcaatggacg ttctatgcat ccaaccaagt aatgaactat tccattcatg aaacaggtaa
    16561 atttttattt ccaggttctg gtcattacac agagagaggc acagaccaag gctttggtta
    16621 ttcaatcaat gttccactcg aaccgtatac agaacatgac tcatttttag aagtttttaa
    16681 aaagacattg aatcaagtcg ctgaatcatt tcaacctgat tttattgtca gtgtgaatgg
    16741 ttcagatatt cattacttag acccattaac ccatatgagt tgtgatctaa atacacttta
    16801 tcaaattcct tacatcatta cagaagttgc tgaaaaatat tgtggtggca agcaaatcat
    16861 gttaggtggc ggaggttaca acatttggcg tgttgtccca agagcatgga gccatattta
    16921 ccttagctta atccaccaac ctcgactaca tggtcgctta cctgaagact ggttgaacaa
    16981 atggcgtcat tatagcccag ttcctatccc tgaatattgg gaagaacagt atgatgatta
    17041 tcaagacata cctcgacgtc cagaaattgc aaaacaaaat aaccaagttg ctgaaaatat
    17101 attaagttgg ttttaaaggg aataagtcat tgaaacaaca tcactgacat gggggcacta
    17161 tttataac
//
LOCUS       DANHPA010000056        17097 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.056, whole genome shotgun sequence.
ACCESSION   DANHPA010000056 DANHPA010000000
VERSION     DANHPA010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 17097)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17097)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17097
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.056"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(440..1288)
                     /locus_tag="PTC28_001449"
     CDS             complement(440..1288)
                     /locus_tag="PTC28_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipase"
                     /protein_id="HDK5716733.1"
                     /translation="MNYIKYISSHDGTQLYTKINTADELFSFGDETINVIIVHGLAEH
                     LDRYDELTDYLVNYDYNVIRYDQRGHGRSEGPRAYYDNQDQIIEDLTAVVDYVKAHFE
                     GKVFLIGHSMGGFAVSMFGTRFPGRVDGIITSGAVTRDNNQLFEEAYGERQIPADTYF
                     PNDMSDGLCSDPRVVENYQRDDLVLKEVSMGLTYAIIDGVIELKSRPNDFVDDVLIMH
                     GTADGLVNPQDTLQFYSEIASEHKSLRLYDGLEHELFNESHYKNVIFEDVASWITEVT
                     ARKNQF"
     gene            1434..2924
                     /gene="cls"
                     /locus_tag="PTC28_001450"
     CDS             1434..2924
                     /gene="cls"
                     /locus_tag="PTC28_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HDK5716734.1"
                     /translation="MQLIFDPAVNTIYRIFLGVVFLMNIVLAFVIIFMERDRRDATST
                     WAWLLLLFIMPTFGFLLYLFFGRAVKLKQTRYDESKEVEDARTRVKDQKENFKNKQFS
                     TDNPVVEKQSDLVEMMLTREASFLSENNHVSIFTDGHELFNRMKQDLKDAQQYIHMEF
                     YILNMDGLGTEILQILKDKAREGLEVKLLYDAVGSKQLRKSKLKGLVDAGVEVEAFFH
                     AKIIPFINFRVNNRNHRKNVVIDGDIGYVGGFNIGDEYLGLDKKMGYWRDTHLRIQGD
                     GVDALQLSFIHDWNSQVDEDEQLKYISRYFPKNARKDGNVALQLGLSGPDREWPQLEF
                     AYLKMIMNAKSTIYMHSPYFVPDIGYVNALRIAAKAGVDIHLIVPNKPDQPFVHWATL
                     TTVAQLMKDGVNVYTYENGFIHSKMMVIDGEVASVGSANMDERSFKLNFEVNAIMYNE
                     EIAQTLIAAFKEDLKVSKKLTPERYAARSNWVKFKQSIAKLLSPIL"
     regulatory      3392..3495
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            3692..5428
                     /gene="thiC"
                     /locus_tag="PTC28_001451"
     CDS             3692..5428
                     /gene="thiC"
                     /locus_tag="PTC28_001451"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HDK5716735.1"
                     /translation="MKQEQIELKKNFPASQRIFKQGEDADIQVPFRQIALSETVTEQG
                     TTENEPFIVYDTAGPYHDDTYEVDVTKGIPALRTNWIEDRQDVEHYEGRRVQSIDNGY
                     HSATHKNIVEHPFKYQPRRAQEGKRVTQMYYAKQGIITKEMKFVAARENVSPEFVKDE
                     IARGRAIIPNNINHPESEPMIIGKNFQVKINANIGNSAVSSSIEAEIEKLVWAIHWGA
                     DTMMDLSTGKNIHATREYLIRNSPVPVGTVPIYQALEKVNGIAEDLTWEIYRDTLIEQ
                     AEQGVDYFTIHAGVLLRYVPLTVDRLTGIVSRGGSIMAQWCLAHHEESFLYTHFDEIC
                     QILNRYDIAVSLGDGLRPGSIYDANDESQIAELKTLGELTDIAWEHDVQVMIEGPGHV
                     PMHKIKENQELADFYCKEAPFYTLGPLTTDIAPAYDHITSAIGAAQIASHGTAMLCYV
                     TPKEHLGLPNKEDVRDGVVTYKIAAHAADIAKGLPGATDRDDAISKARFEFRWIDQFN
                     LSLDPERARAFHDETLPAESAKVAHFCSMCGPKFCSMRISHNIRDAHKEKLAGMQEMA
                     EEFKAQGSKIYH"
     gene            5642..6652
                     /locus_tag="PTC28_001452"
     CDS             5642..6652
                     /locus_tag="PTC28_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HoxN/HupN/NixA family nickel/cobalt transporter"
                     /protein_id="HDK5716736.1"
                     /translation="MNNTKNIKHAYPYLGIVILLHIVGIVLMWIGGAQYPLLMSMGVI
                     AYTLGLRHAFDADHIAAIDNTVRKLLQQKQNPMGVGFYFSLGHSSVVFLMAAALGIAV
                     TWAQRHMESFQTTGGLIGTIVSGVFLLLIGILNLVILVQLIQLFRQLRQRNITDAQMD
                     ELIESRGLIMRFVQPLFQFIQKSWHIFPLGFLFGLGFDTASEVSLLALSAGAAQHTVP
                     FLGIIALPILFAAGMSLLDTLDGVLMTNAYHWAFDKPARKIFYNITMTAISVVAALLI
                     GGVEIMQLLGEKWHWKNGFLGWVTQLDFGWLGYALVVVLILSWIIAMVVWKVGRFEER
                     WG"
     gene            complement(6806..7984)
                     /locus_tag="PTC28_001453"
     CDS             complement(6806..7984)
                     /locus_tag="PTC28_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5716737.1"
                     /translation="MEQQSNRINWLLFIGIMLIAANLRAPITSVGVVLPAIKDTLNLS
                     NTAVSFISIIPLLAFAIISSLVAKVSHCFGMERSLFVALLLILFGVILRSITEVSLLY
                     IGTILIGVGIAFGNVLAPGMIKSKFPYRIGIMTGYYTVVMNIFGALSSYGAAPLLKHY
                     NYNVALGSIGIVAFIAVLLWTFQLRHHAAQKQVDLSEAVNVWKSPLAWQITLLMGGQS
                     LIFYSLINWLPEFLLSYDIPVSRAGLYLSLLQIAIIPLTFVTPIYAARLKNQVLPIAF
                     TGVLFTVAILILMFAPRMALVSLIIIGIALGIAFGLVNTLFSLRTESGLTAAKLAGMS
                     QAVGYLFACIGPMFFGILHDWTGQWIVSLSVLLVTGLAIMTIGSRSGRNTTIEKTLEP
                     "
     gene            8093..8641
                     /locus_tag="PTC28_001454"
     CDS             8093..8641
                     /locus_tag="PTC28_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDK5716738.1"
                     /translation="MENINTVVAENLQYYRQAHRLSLDKIAQLTGISKTMISQIEKGV
                     ANPSINTLWKIANGLRIPLTSLISEENEAIQKIDRSDIQPIYNDNRSVVVFPYFPYEA
                     AHAFEMFCMRMDADSILESDAHQEGAKEYIIVNEGTLTLTVGDTHYEIEAGQAISFNA
                     NTAHTYRNQTSEELRITATIQY"
     gene            8750..9337
                     /gene="lepB"
                     /locus_tag="PTC28_001455"
     CDS             8750..9337
                     /gene="lepB"
                     /locus_tag="PTC28_001455"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDK5716739.1"
                     /translation="MRKETKDIIIVIVIALVIVGFVKWLIFTPYTVNGASMHPTFETG
                     DRVIVNQLSKKLNTLTHGDVIVFHEDAERDFIKRIIGLPGDRVAYENDQLYINGQKVE
                     EPYLKVNKKEKAAEFLTENFDVSDIEGSEGRTMIPQGHYLVLGDNRMNSIDSRSYTVG
                     LVPHKRIVGKAFVRYWPLERAKLQFNPGTFEKVEA"
     gene            complement(9491..10126)
                     /locus_tag="PTC28_001456"
     CDS             complement(9491..10126)
                     /locus_tag="PTC28_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716740.1"
                     /translation="MKSDLTSRKHKHAHPSHQQRQLKYKPSPSSNPKWIIALIILLII
                     IALGGMIYGGYRLSQVKLHLNTTDNQATTTQSEQNTATVHLDVLSYDFSQDFMHSDHI
                     DGYQDFHIGETRKDVEATHGPPEKTVEIDGRDAASYGDLAVSYNAQHQVEHIYVTPHQ
                     VTTAQFIDVHQAPNMTDGNIWYYDSRQDNPYTIKVYTQNDQVIAIENIPQI"
     gene            10574..11995
                     /locus_tag="PTC28_001457"
     CDS             10574..11995
                     /locus_tag="PTC28_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HDK5716741.1"
                     /translation="MKFKRQFAQLSIASALIASTLGAGHVASASSAGEGPEQQATMYG
                     DTSHPKNVIFLVGDGMGPAYNTAYRYFADSPDTKEVENTAFDDYLVGTQQTYSDDDKE
                     NITDSAAAGTAFSSGHKTYNGAIGVDKKQNDLETVLERAKKLGKSTGLVSTAEITDAT
                     PAAYTANVDDRDKKDEIAHQFYDQRINNQHKVDVILGGGAKYFGKENGNITDQFKNDG
                     YGVVTNRQQLENASEEQLLGLFADKNMPLAIDAEEDQPELLDMQNAALERLSKNDKGF
                     FLMVEGASIDKQGHANDITGVMSEMEGFEKAFANAIDYAKSHPDTLVIATADHSTGGL
                     SMGQGSAYEWNPEPIQQMKHSGKWMTEQIADGKGVEETIQAGYGFDLSEKELNAIQQE
                     ADALKKLDEESDDYEAKQQKLEDAIQAPINKKSNTGWTTNGHTGEDVNTYAFGPGADQ
                     FQGNIDNTDNAKNIFNFFGDVKQ"
     gene            12148..12540
                     /locus_tag="PTC28_001458"
     CDS             12148..12540
                     /locus_tag="PTC28_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(deoxy)nucleoside triphosphate
                     pyrophosphohydrolase"
                     /protein_id="HDK5716742.1"
                     /translation="MKKTIHVVGAVIFDQHKVLCAQRSESMSLPLLWEFPGGKIEQGE
                     TDVEALKREIREEMKCDLEVGDKVTTTEYEYDFAVIVLTTYRCTLKDTLPTLTEHRAI
                     EWLDSKDLYRLEWAPADIPAVDIIVNEA"
     gene            12545..15409
                     /locus_tag="PTC28_001459"
     CDS             12545..15409
                     /locus_tag="PTC28_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDK5716743.1"
                     /translation="MDHLLDDFKNSLHKGFIDRSIEKQGHFLPKLLINNAQENVLATI
                     IDELYRCESFSISVAFVTESGLASLKTHLYELKLKGVRGRILTSNYLSFNSPKMYEEL
                     MKLENVDVRVTNVNGFHAKGYIFDHDYYTSMIVGSSNLTSHALKVNYEHNIMFSSHRN
                     GDIVHKVKNQFEQLWEASEPLTASWIESYRKLYQPKTRQAIFEVEQAQIEKQRQLQSA
                     QAIIPNMMQQEALRELEMIRQQGESRSLIISATGTGKTIMSALDVRQVQPEKFLFVVH
                     NEGILRRAMEDYRRVLADEPADAFGLLTGNDKQTTAKYLFSTIQTISKPDIYEQFSRE
                     HFDYIVFDEAHRVAAASYRRVFNYFTPEFILGMTATPERNDTPNIFELFHYNIAYEIR
                     LQAALENDILCPFHYFGVTDYEVDGIISDDTISLQKLASDARVQHIIERTEYYGYSGD
                     QLKGLIFVSRKNEAHALAEKLSAFGYPSVALTGDDAQQRRAEVIAQLRLGELNYIITV
                     DLFNEGIDIPEVNQVVMLRATTSSIIFVQQLGRGLRKSSNKEYVTVIDFIGNYKNNYL
                     IPIALSGDPSYHKDNYRQFLTNPAVLNGVSTINFEEVAKKQIFESLTKATLNSVKILD
                     DAYENVARRIGRQPLLMDFNDQNAIDPLIILEKYKNYHEFLEKRGYTTEVLETDAFKN
                     LTFLSREVAPGLKNTEHFILQRLIEGDARIAELLEHMQQIDSAVTVADIETTLKILDF
                     SYFKNDIEKSYGPPVIHRQGDVIELAAHFQHQLKNERFQRYVEDIIRLGQYNNEMKFE
                     GQNEFIRYQKYFRKDFVKIMNWDKDVSSTIYGYQVRHHMVPIFVTYHKQEDITTSTQY
                     GDTFISQSEFKWYTRSNRSLKSSEVDDIVHHQARNIPLYLFVKKEDAEGKNFYYLGRV
                     HVIEGTVEETTMKSGEPVVTMHFNLETPVRDDIYRYIVEH"
     gene            15571..16893
                     /locus_tag="PTC28_001460"
     CDS             15571..16893
                     /locus_tag="PTC28_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HDK5716744.1"
                     /translation="MRKSLEEINGTVAYHRDAPSWKKVFFFLGPGALVAVGYMDPGNW
                     MTSMAGGAQYGYILLSVILISSLAAMLLQSMCARLGIASGMDLAQVTRAMTSKKVAVV
                     LWLFTELAIMATDIAEVIGSAIALNLLFHIPLWLGVTVTVLDVFLLLAIIKLGFRKIE
                     ALVTVLVLTVFIIFVFEVYLSDPVWGDVFSGFLPQSSVVTQPGALYIALGIIGATIMP
                     HNLYLHSSIVQSRNYERQSDEEKREAIRYATIDSNVQLSLAFIVNCLLLILGAALFFG
                     SGEALGGFYDLYDALTHSEVSTVIGGAVMSTLFAVALLASGQNATITGTLSGQIIMEG
                     FVHLKMAQWLRRLVTRIIAVIPVFFCLWLYGSSTEKIENLLIFTQVFLSLALPLSVIP
                     LVIATNNPKIMGKDFTNPRWVNLIAWALAIILTILNIYLIYATFGELG"
BASE COUNT         5473 a         2931 c         3641 g         5052 t
ORIGIN      
        1 tccgaaccct taacaatccc taaacttgtc gaatggtcgg cttaatagat cacgctatgc
       61 cgacattcgt ctgcaagttt agttaagggt tcttttaatc ataaagacaa cttgactgat
      121 gaagaaaaag aattaatgag tttacgcaaa gaagttaaac agttaaaaat ggagaacgac
      181 attttaaagc aagcagcact gatcatagga cgaaaataga attcgttcaa cagaatgcac
      241 atcaatattc agtatcagca atgtgtaaag tcctaaaaat accgagaagc acttattatg
      301 attcaataaa aagaatccca aataaactta atagtgatga ttattcacaa ctagagctgt
      361 tttaattata aacttaggca gtgagagcat agtaccaatt aaagctctca ctgccttttg
      421 ttaatataca tatcaacctt taaaattgat ttttacgtgc agtcacttct gtaatccagc
      481 ttgcgacatc ttcaaaaatg acgttcttgt aatgagattc attaaaaagc tcatgttcta
      541 aaccgtcgta caggcgtaat gatttatgtt ctgacgcgat ttcactataa aattgtaaag
      601 tatcttgggg attgacgagg ccatctgctg taccgtgcat aatgagtaca tcgtctacaa
      661 agtcattagg tctagatttt aattcaatga caccatcgat aatcgcataa gttaagccca
      721 tcgacacttc ttttaatacg aggtcgtcac gttgataatt ttcaacgaca cgtggatctg
      781 aacatagacc gtcgctcatg tcatttggaa aatacgtatc ggctggaatt tgacgttcac
      841 cgtatgcttc ttcaaataat tggttattgt cgcgtgtcac tgcaccagaa gtaataatgc
      901 catcgacacg acccgggaaa cgtgtaccaa acatagagac agcgaaaccg cccatactat
      961 gaccgattaa gaacacttta ccttcaaaat gagctttcac atagtctact acggctgtta
     1021 aatcttcaat gatttggtct tgattgtcat aataagctct cggtccttca gaacgcccat
     1081 gaccgcgttg gtcgtaacga atgacattgt aatcataatt gaccaaataa tcagttaatt
     1141 catcgtaacg atcaagatgt tcagctaaac catgtacaat aatcacatta attgtttcat
     1201 ctccaaaaga gaataattcg tcagcggtat tgattttcgt ataaagctgc gtgccgtcat
     1261 gcgaagaaat atatttgata taattcattg taaaacctcc ttattgattt acttcagtgt
     1321 atactaaaat aacaataacg tgaaagaata tgaagataaa ttcaaaagtg atatattgat
     1381 gaatgtgatt gataaaatat atgattgaaa tcagtgtaaa ggaggttttc gcgatgcaac
     1441 tcatatttga tcctgctgtg aatacgattt atcgcatctt tttaggcgtc gtttttctta
     1501 tgaatattgt gctcgcgttc gtcattattt ttatggaaag agatcggcgg gatgcgacat
     1561 cgacatgggc atggttactg ttacttttta ttatgccgac atttggcttc ttgttgtatc
     1621 tcttctttgg tcgggcggtc aaattgaaac aaacacgtta tgatgaaagt aaagaggtag
     1681 aagatgcaag gacacgtgtt aaagaccaaa aagaaaactt taaaaataaa caatttagta
     1741 cagataatcc tgtagtagag aagcaatctg atttggttga aatgatgtta acacgagaag
     1801 caagcttttt aagtgaaaac aatcatgtct ccatttttac agatggccat gaattattta
     1861 atcgaatgaa acaagacttg aaagatgcgc aacaatacat tcatatggag ttttatattt
     1921 taaatatgga tgggttaggt actgagatac ttcaaatatt gaaagacaaa gctcgggaag
     1981 gcctcgaagt gaagttgttg tatgatgcgg tcggttctaa acaactgaga aagtcaaaat
     2041 taaaaggttt ggttgatgcg ggtgttgaag tggaagcctt tttccatgca aaaatcattc
     2101 catttatcaa tttccgtgtg aacaatcgga accaccgtaa aaatgttgtc attgatggcg
     2161 atattgggta tgtcggtggt tttaatattg gagatgaata cctcggttta gacaagaaaa
     2221 tgggttactg gcgtgataca catttgcgca ttcaaggtga cggggtagac gcattacaat
     2281 tgagttttat tcatgattgg aactcacaag tagatgaaga cgaacaattg aaatacatat
     2341 ctcgatactt ccctaaaaat gcacgtaaag atggaaacgt cgcattgcaa cttggtttaa
     2401 gcggaccaga cagagagtgg ccgcaacttg aatttgcata tttgaaaatg attatgaatg
     2461 cgaagtccac catttacatg cattcacctt attttgtacc agacattggt tatgtgaatg
     2521 ccttacgtat tgccgccaaa gcaggcgttg acattcatct gatcgtccct aataagccag
     2581 atcaaccgtt tgtgcactgg gcgacgttaa cgacagtcgc gcaactgatg aaggatggcg
     2641 tcaatgtgta cacgtatgaa aacggcttta ttcactctaa aatgatggtc attgatggtg
     2701 aagtcgcatc ggtcggttca gcgaatatgg acgaacgaag ctttaaactg aactttgaag
     2761 tcaatgcgat tatgtataac gaagagattg cgcaaacatt aatagcagcg tttaaagaag
     2821 atttgaaagt gtcgaaaaaa ttgacaccag aacgttatgc agcccgctca aattgggtga
     2881 aattcaagca gtctatcgca aaactactgt cgcctatttt ataaactttt tctgtatttg
     2941 aacttgatat tacgattgtc atcaaaggtt cgcgttccca ggggctgacc cttcaactaa
     3001 ccaacacttt atttatacag ttactgagac gaagcgttgg tggattttcg gggccatctg
     3061 atccctcggg agtctcaccc agatgccaat catgcgttaa atacagccaa gaaacaaata
     3121 gccgagtttt tatggatgtc agaatatttt acgtcaaatt tgatggatgt gtatatttca
     3181 tatatgcaag gtatcgtttg gtggttattt agataacaca ttgatcaact ttttgtttat
     3241 attgaagaag tatataaaag caatatatag aaaactatat tctacttaat ttgataatca
     3301 aatgacaaaa ataaaataat tcaatcaatt ttatgatagt aattgtcatt ttacattttt
     3361 agtgatacga tactgttgta aaactaaaaa ttgaacttgc taggggtgcc attaatgcgc
     3421 tgaaagaggt gaacgcctca accctttgaa cctgatctag atcatactag cgtagggaag
     3481 caaacgaaac cttcatgact gactggtgct catttgtcag gcgaaatcgt gttgtgatgc
     3541 aacatacatg atttgggctc acttttgacg cattttaata gattcgttcg ttttcgtacg
     3601 cactttagaa ttattctgag tgcgttttta ttttgcctat tattttcagt gttgttaatg
     3661 cctcttagtg aagtcagagg gggttaatgg aatgaaacaa gaacaaattg aattaaagaa
     3721 aaactttcca gcaagtcaac gtatttttaa gcaaggtgaa gatgcggata ttcaagtccc
     3781 atttcgccaa atcgcattgt ctgaaacagt aactgaacaa gggacaacgg aaaatgaacc
     3841 tttcatcgtc tatgatacag cggggcctta tcatgatgat acatatgaag tcgatgttac
     3901 gaaaggcatt ccggcactgc gcacaaattg gattgaagac cgtcaagatg tcgaacatta
     3961 tgaaggccgt cgtgtgcaat caatcgacaa tggttaccat tcagcaacgc ataaaaatat
     4021 tgttgaacat ccattcaaat atcaaccgag acgtgcacaa gaggggaaac gcgtgacaca
     4081 aatgtattat gcgaaacaag gtatcatcac taaagaaatg aagttcgttg cagcacgtga
     4141 aaatgtcagt ccagaatttg tcaaagatga gattgcgaga gggcgcgcga ttattccgaa
     4201 caacatcaat catcctgaat cagaacccat gattatcggt aaaaactttc aagtgaagat
     4261 taatgcaaat atcggtaact ctgctgtatc gtcctctatt gaagcagaaa ttgaaaagtt
     4321 agtctgggcg attcattggg gggctgatac gatgatggac ttatcgacag gaaaaaacat
     4381 tcatgcgaca cgagagtatt taatccgtaa ctcgccagtt ccagttggta cggtgccgat
     4441 ttatcaagcg ttggaaaaag tgaacggtat cgcggaagac ttaacctggg aaatatatcg
     4501 agatacttta attgaacaag ctgaacaagg tgtggattac tttacgattc atgcaggtgt
     4561 cttattacgc tatgtgccat taacagtgga tcgtttaaca ggcatcgtgt ctcgtggtgg
     4621 ctcaattatg gcgcaatggt gtttggccca tcacgaagaa agctttttat acacgcattt
     4681 tgatgaaatt tgtcaaatat tgaaccgtta tgatattgcg gtgtcattag gtgatggttt
     4741 acgtccgggt tcgatttatg atgcaaatga tgaaagtcaa attgctgaac tgaaaacgtt
     4801 aggtgaattg accgatattg cttgggaaca cgatgtccaa gtgatgatag aaggacctgg
     4861 gcatgtaccg atgcataaaa ttaaagaaaa ccaagagttg gcagactttt attgtaaaga
     4921 agcgccattt tatacactcg gaccgctaac aaccgatatt gcaccggcat atgaccacat
     4981 cacatcagcg attggtgcag ctcaaatcgc gagtcatggg acagcgatgt tatgttatgt
     5041 gacacctaaa gagcatctcg gcttaccgaa taaagaggac gtgcgtgatg gcgtcgtgac
     5101 gtacaaaatc gccgcacatg ccgctgatat cgctaaaggg ttaccgggtg cgacagatcg
     5161 agatgatgcg attagtaaag cccgctttga atttagatgg atagatcagt ttaacttatc
     5221 gcttgatcct gaacgcgcac gtgcttttca tgatgaaaca ttgccggcag aatcagctaa
     5281 agtggcgcat ttctgtagta tgtgtggacc gaaattctgt tcaatgcgta tttctcacaa
     5341 tatccgtgat gcgcataaag aaaaattagc agggatgcaa gaaatggctg aagaatttaa
     5401 agcacaagga agtaagattt accattaatc gaaataagga agagggtggg atcaatatag
     5461 ttttcccagc ctctattcat tttatttttg cttgtttggt aggtatacaa gttttgtgtt
     5521 atataaaaaa tatcattatt ctctaaatgt tttctataga tgtattacag ctaaaaattt
     5581 gaaattatgg gaaaaagttg tatgatttta ttatctcaaa atagaaatag gtgaaaatga
     5641 aatgaataac acaaaaaata tcaaacatgc ctatccttat ctcggcattg tcattttatt
     5701 acatattgtc ggtattgtat taatgtggat tggaggcgcg caatatccgt tattaatgag
     5761 catgggggtg attgcttata cactcggatt gcgtcatgcg tttgatgcgg accatattgc
     5821 ggcgattgat aataccgtgc gcaaattact ccaacaaaaa caaaatccaa tgggtgtagg
     5881 tttttacttt tcattaggac attcctccgt tgttttctta atggcggctg ctctaggtat
     5941 tgcggtgact tgggcacaac gtcatatgga aagctttcaa acgacaggtg gattaatcgg
     6001 tactattgtt tcaggtgtct ttttattgtt aattggtatt ttaaacttag tcattttagt
     6061 gcaactgatt caattattcc gtcaattacg tcaaagaaat attacagacg cacaaatgga
     6121 tgaactcatc gaatcacgtg gcttaattat gcgttttgtt caaccactct ttcagtttat
     6181 tcaaaaaagt tggcacattt tcccattagg tttcttattt gggcttggtt ttgatacggc
     6241 gagtgaagtg tcattactcg cattatcagc gggggcagcg caacatactg taccgttttt
     6301 agggattatc gcgttaccta tattgtttgc ggcggggatg agtttgttag acacattgga
     6361 tggggtattg atgacaaacg cgtatcattg ggcatttgac aaacctgcac gtaaaatctt
     6421 ctataacatt acgatgacag ccatttcagt cgttgccgca ctactaatcg gtggcgtaga
     6481 aatcatgcaa ttactgggtg aaaagtggca ttggaaaaat ggttttctcg gctgggtgac
     6541 ccaactagat ttcggttggc tcggctatgc attagtcgtc gtgctcatac tttcatggat
     6601 tattgcgatg gtcgtgtgga aagtcggccg ctttgaagaa agatggggtt aatttcatga
     6661 taaaaaaacg ttttaagcaa acggaaagac agacgtcagt ttgaaaaatc attcaaacca
     6721 cgcctgtctt ttaaattgga tgaaaagtga tgagaatgta agaacaactc gagaaacttg
     6781 aaaatatgct aagtcaaatc aagcgttaag gttctaatgt cttttcaata gttgtgtttc
     6841 gtcctgatct tgatccaatt gtcataatcg caagacctgt cacgagtaat actgatagcg
     6901 acacgatcca ttgtccagtc caatcgtgta aaataccaaa gaacatgggt ccgatacatg
     6961 cgaataaata gcccactgct tgagacatac ccgctaattt tgctgctgtc aaaccgcttt
     7021 ctgtacgtaa actaaacaat gtgtttacga gaccgaaagc gatgccgagt gcgattccga
     7081 tgataatgag cgaaacaagt gccatacgcg gcgcaaacat taatattaaa atcgctacag
     7141 taaagagaac gccagtgaat gcgataggta agacttgatt tttaagtcgt gcggcataaa
     7201 tcggtgtaac aaaagttaat ggaataatcg caatttgtaa tagcgataaa taaaggcctg
     7261 cacgtgatac cggaatatca tacgataata aaaattctgg tagccagtta atcagtgaat
     7321 agaaaataag agactgtcca cccatgagta gcgtaatttg ccaagcgagt ggcgatttcc
     7381 atacattgac agcctctgag aggtcgactt gtttttgtgc tgcatgatga cgtaattgaa
     7441 acgtccataa gagtacagca atgaacgcga cgatgccaat actgcctaat gcaacattat
     7501 aattataatg tttaagtagc ggtgcggcac cataagatga gagtgcccca aagatgttca
     7561 tcacaacagt ataataacct gtcataatgc caatacgata tggaaatttg gatttaatca
     7621 taccgggcgc aagaacattc ccaaatgcaa tcccgacacc aatcagtatt gtcccaatat
     7681 ataataaact gacctctgta atgcttctta atatgacacc gaatagaatc aataataaag
     7741 cgacaaagag tgagcgctcc atcccgaaac agtgactgac tttagcgaca agtgatgaaa
     7801 taatcgcaaa agctaataga ggaataatgg aaataaagct gacggctgtg ttggataagt
     7861 ttaatgtatc tttaatcgcg ggtaatacca cgcctactga agtaataggt gctcttaaat
     7921 tagcggcaat aagcataata ccgataaaaa gtaaccagtt aatacggtta gattgttgtt
     7981 ccaaggtgtc aactcctctc tatatttgat ataattgacg aaacgttcta tataaagaac
     8041 acagtatatc gtacatgatg ttcactatat tgtaaataga aggtgctcaa aaatggaaaa
     8101 tattaacaca gtcgttgcag aaaacttaca atattaccgt caagcacatc gtctcagttt
     8161 agataaaatc gcacagttga ccggtattag taaaacaatg attagtcaaa ttgaaaaagg
     8221 ggtagcgaat ccaagtatca atacgttgtg gaaaatcgca aatgggttac gtattccgtt
     8281 gacctcatta attagtgaag aaaatgaagc gattcaaaaa atagaccgct cagacataca
     8341 gccgatttat aatgataatc gctcggtcgt cgtttttccg tactttccat atgaggcggc
     8401 acatgcgttt gaaatgtttt gtatgcgtat ggatgcggac agtatacttg aatcagatgc
     8461 acatcaagaa ggcgcgaaag aatacattat tgtgaacgag ggtactttaa cgctcactgt
     8521 tggagacaca cattatgaaa ttgaagcggg ccaagccatc agttttaatg ctaatacagc
     8581 gcatacgtat cgcaatcaaa caagtgaaga gcttagaatt acggcgacca ttcaatatta
     8641 atagtgaagg gagtctgcgg taagcgtgcc ggtagactgc ctcgtgttgt agagttatga
     8701 aaaattaaat aacataggaa tagagttgag tgcatgaaag gggcatagaa tgcgaaagga
     8761 aacaaaagat atcatcatag taattgtaat cgccctagtg attgtcggtt ttgttaaatg
     8821 gttgattttc acgccttaca cggtcaatgg ggcctctatg caccctacat ttgaaacagg
     8881 tgaccgtgtc attgtgaatc aactgtcaaa aaagctcaac acgctaactc acggggatgt
     8941 gattgtgttc catgaagatg cggaacgtga ttttatcaag cgcattatag gtttacctgg
     9001 tgatcgcgtg gcttacgaaa atgatcaatt gtatattaat ggtcaaaagg tagaggaacc
     9061 ttatttaaaa gtgaataaaa aagaaaaggc agctgaattt ttaaccgaaa actttgatgt
     9121 atcggatatt gagggctcag agggaaggac aatgatacct cagggacatt atctcgttct
     9181 tggtgacaat cgcatgaaca gtatcgatag tcgttcgtat acagtaggac tcgtgccaca
     9241 caagcgtatt gtaggcaaag catttgtgag atattggcca ttagaacgtg cgaaacttca
     9301 gtttaatccg gggacatttg aaaaagttga agcataagga tgtttcatgt gaaacgacgg
     9361 catttaaagt aatgtaaaaa tcacggccat acttcgttgt ttgaagtgtg accgtgattt
     9421 tttgctttgt ttttaacatt tgcaccgatg gctgaacgat gttgcgcgtt cctagacact
     9481 ttattagcaa ttaaatttgc ggaatatttt cgatggcaat gacttgatcg ttttgtgtgt
     9541 atactttgat ggtataggga ttgtcttggc gactatcgta ataccaaata ttgccatctg
     9601 tcatgttagg cgcttgatga acatcgataa attgtgctgt tgtgacttga tgtggtgtga
     9661 cataaatatg ttcgacttgg tgttgtgcat tataactgac agcaaggtcg ccatatgatg
     9721 ccgcgtcacg accatcaatt tcaacagttt tttctggagg gccatgggtt gcctcgacat
     9781 ctttacgcgt ctctccgata tgaaagtctt gataaccatc aatgtgatca ctatgcatga
     9841 agtcttggct aaagtcgtat gacagtacat cgaggtgaac ggttgctgta ttttgctcgc
     9901 tttgagtggt tgtcgcttga ttgtctgtag tgttcaaatg gagctttact tgagacaaac
     9961 ggtaaccgcc atatatcatc ccaccaagtg caatgataat cagtaaaatg atgagtgcaa
    10021 tgatccattt cggattagat gatggagagg gtttatactt gagctgacgt tgttgatgtg
    10081 atggatgagc atgtttatgt ttacgagacg tgaggtcgct tttcaaaaaa taacctcctt
    10141 tatttctttt aatattgtca ttataagtag ttgcagaatt ggaaacaact ataaaaggca
    10201 aaatataacg aaaaaattgt atgccaaata aacattctca tctatttcca atgcaattca
    10261 aatcattgtt agtatgataa taacaaaata agaaatagtt ggcatgtagc attgactttt
    10321 atcattgtca tttataaaaa aataaaaatt aaccgcacta tccctacgtt ctcaattttt
    10381 taagtggctc attcctttta tgatgatttt tatagtgatg ttaggtttgt ttttatatac
    10441 aggggactgg gtagggagag aggtgctgct cttccttttt ttacatactt ttaatcataa
    10501 cctcacacca tatttaaatt gtttcattac aatggcagtg tattgaatat ttgctatggg
    10561 ggttatgaca attatgaaat ttaaaaggca gtttgcacaa ttatccatcg cgagtgcact
    10621 gatcgcatca acattaggag cgggacatgt ggcatccgca tcaagtgcag gtgaaggtcc
    10681 tgagcaacaa gcgacgatgt acggtgacac gagccatcct aaaaatgtga ttttcttagt
    10741 gggagacggc atgggaccgg cgtacaacac agcataccgt tattttgcgg atagtccaga
    10801 tacaaaagaa gtggaaaaca cagcttttga tgattattta gtagggacac aacaaacgta
    10861 ttccgatgat gataaagaaa acattaccga ttctgcagcg gcaggaacgg catttagttc
    10921 tggccataaa acgtataatg gcgcaattgg tgtagataaa aagcaaaatg acttagaaac
    10981 tgtactcgaa cgtgcgaaaa agttaggcaa atcaaccggt ttagtctcaa ctgctgaaat
    11041 tacagatgcg acacccgctg cttatactgc aaatgttgat gaccgtgata aaaaagatga
    11101 gattgcccat caattttatg atcaacgtat taacaaccaa cataaagtcg acgtcatttt
    11161 aggtggcggt gcgaaatatt ttggcaagga aaatggaaac atcacggacc agtttaaaaa
    11221 tgatggctat ggtgtggtga ctaatcgcca acaattagag aacgcgagtg aagagcaatt
    11281 gctaggattg tttgcggata aaaatatgcc gctcgcgatt gatgcagaag aggaccaacc
    11341 tgaattgtta gacatgcaaa acgctgcact tgagcgcctt tctaaaaatg ataaaggttt
    11401 cttcttaatg gtggaaggag cgtctatcga taaacaaggt catgcgaacg atattacagg
    11461 ggtcatgtcc gaaatggaag ggttcgaaaa agcatttgcg aacgcgattg attacgccaa
    11521 atcacatccg gatacactcg ttattgcgac tgctgaccat tcaacaggtg gtttaagtat
    11581 gggacaaggc agtgcatacg aatggaaccc agagccgatt caacaaatga aacattctgg
    11641 caaatggatg acagagcaaa ttgctgacgg taaaggtgta gaagaaacga ttcaagcagg
    11701 atatggattt gacttgagtg agaaagagtt gaacgccatt caacaagaag cggatgcatt
    11761 gaagaagtta gacgaagaaa gtgacgacta tgaagccaaa caacaaaaac tggaagacgc
    11821 cattcaagca ccgattaaca aaaaatccaa tacaggttgg acaacaaacg gtcatacagg
    11881 tgaagacgtg aacacctatg catttggacc tggcgctgat cagttccagg gtaatatcga
    11941 taatacagac aacgcgaaaa acatcttcaa cttttttggg gatgttaagc agtagaagtg
    12001 aataaggaaa aataaaggta caaagactgg gatatcattg cattatcctg gtcttttttt
    12061 aatttttgca gtaaataatg cacattcaaa cattttatga gatcatttat aatatatata
    12121 atgaaacttg aggaaggggc atacatgatg aagaaaacga ttcatgtcgt aggtgctgtt
    12181 atctttgatc aacataaagt gctatgcgcg caaagaagtg aaagtatgag tttaccttta
    12241 ttatgggaat ttccaggcgg caaaattgag caaggagaaa cggacgttga agctttaaag
    12301 agagaaattc gtgaagaaat gaagtgtgat ttagaagtgg gcgacaaagt cacaacgact
    12361 gaatatgaat atgattttgc tgtcatcgtg ttaacgactt accgttgtac attgaaagac
    12421 accttgccga cacttactga acaccgagcg attgaatggt tagatagcaa agatttgtat
    12481 cgtttggagt gggcgccagc tgatattcca gcagtagata tcatagtaaa cgaggcgtaa
    12541 cgagatggac catttacttg atgattttaa aaattcgtta cataaaggtt ttatcgatcg
    12601 ttctattgaa aaacaaggtc actttttgcc taaacttctc attaataatg cacaagaaaa
    12661 tgtattagcg acgattattg atgagttgta tcgctgtgaa tcatttagta tttctgtcgc
    12721 atttgtaact gagagtggtt tagccagttt gaaaacacat ctttatgaat tgaagctgaa
    12781 aggtgttagg ggccgcattt taacttctaa ctatttatca tttaattcac ctaaaatgta
    12841 tgaagagtta atgaagttag aaaatgtaga tgtgcgagtc acaaatgtga atggttttca
    12901 tgcaaaaggc tatatttttg atcatgatta ctatacgtcg atgattgttg gcagttctaa
    12961 tctgacgtct catgcattaa aagtaaatta cgaacataat attatgtttt catctcatcg
    13021 caatggtgat atcgtacata aagttaaaaa tcaatttgaa cagttatggg aagcaagtga
    13081 gccattaaca gcgtcgtgga ttgaaagcta tcgtaaattg taccaaccga aaacgagaca
    13141 agcgatattt gaagtagaac aagcgcaaat tgaaaaacaa cgacaattac aatctgctca
    13201 agcgatcata ccgaacatga tgcaacaaga agcattgaga gaactggaaa tgattagaca
    13261 gcaaggagaa agtagaagct tgatcatttc agcgacaggt acaggaaaaa caatcatgtc
    13321 tgcacttgac gtgagacagg tacaaccaga aaaattcctt tttgtcgtac ataatgaagg
    13381 gattttgcga agagcgatgg aagattatcg acgtgtgtta gcagatgaac ctgctgatgc
    13441 atttgggtta ttaactggaa atgataagca aacaactgca aaatacttat tttcaacgat
    13501 tcaaacgatt tcgaaacctg atatttatga acagttttca cgggaacatt ttgattacat
    13561 cgtatttgat gaagcgcacc gtgtagctgc cgcttcatat cggcgcgtgt ttaattattt
    13621 tacacctgag ttcattttag gtatgacagc gacacctgaa cgtaatgata caccaaatat
    13681 ttttgaactg tttcattaca acatagctta tgaaattcgc ttgcaagcag cattggaaaa
    13741 tgacatctta tgtccattcc attattttgg tgtcacggat tatgaggtgg acggtatcat
    13801 tagcgacgat acgatttcac ttcaaaagct tgcttcagac gcccgtgttc aacatatcat
    13861 tgaacgtacc gaatattacg gttactctgg tgatcaactg aaggggctta ttttcgtaag
    13921 tcgtaaaaat gaagcgcatg cgttagctga aaagttatcg gcttttggtt atccatcagt
    13981 ggcgcttacg ggtgatgatg cgcaacaacg ccgtgctgaa gtgattgcac agttgcgttt
    14041 aggtgagctg aattatatta ttacagtcga tttatttaat gaaggtatcg acatccctga
    14101 agtgaaccaa gttgtcatgc tcagagcgac gacatcgagt attatttttg ttcaacaact
    14161 cggtcgaggt ctccgtaaaa gtagtaataa agagtatgta acagtgatag attttattgg
    14221 taactataaa aataattact taatcccgat tgcattatct ggagacccaa gttaccacaa
    14281 agataactat cgccaatttt taacaaatcc ggctgtgtta aatggcgttt ctacgattaa
    14341 ttttgaagaa gtcgctaaaa aacaaatttt cgagtcattg actaaagcaa ctttaaatag
    14401 tgtcaaaatt ttagatgatg cctatgaaaa tgttgcgcgt cggattggtc gtcaaccttt
    14461 actgatggat tttaatgacc agaatgcgat tgatccattg attattttag agaaatacaa
    14521 aaactatcat gagtttcttg aaaaacgtgg ttatacaaca gaagttttag agacagatgc
    14581 ttttaaaaat ctcacatttt tatcaagaga agttgcacca ggattaaaaa acacagaaca
    14641 tttcattttg caacgtttga tcgaaggcga tgcgagaata gcagaattat tagaacacat
    14701 gcaacagatt gattcagcag tgaccgtagc agatattgaa acgaccttga aaattttgga
    14761 ttttagctac tttaaaaacg atattgaaaa gtcgtacggt ccgccagtca ttcatcgaca
    14821 aggtgatgtc attgaattgg ccgcacattt tcaacaccaa ctcaaaaatg aacggtttca
    14881 acgttatgtt gaggacatca ttcgccttgg acaatataac aatgagatga aatttgaagg
    14941 tcaaaatgag ttcatacgct atcaaaagta tttccgtaaa gactttgtga aaataatgaa
    15001 ttgggataaa gatgtgtcga gtacgatata tggttatcaa gtaaggcatc atatggtacc
    15061 tatttttgtc acttatcata aacaagaaga tattacgaca tctacacagt atggcgacac
    15121 atttataagt caaagtgaat ttaaatggta tacccgttcc aatcgttcac ttaaatcttc
    15181 agaagtagat gatattgttc atcatcaagc gcgcaacatt ccgttatatc tatttgtgaa
    15241 aaaagaagat gcagaaggta aaaacttcta ctatttaggg cgtgtgcatg tcattgaagg
    15301 caccgtggaa gaaacaacga tgaaatctgg agaacctgtt gtcacaatgc attttaactt
    15361 agaaacgcct gttcgagacg atatttaccg ttatatcgtc gaacactaac tctcaactca
    15421 aatactattt ttcaaaagcg attgcgatat gcgtcgcttt taattttgtc tcaattcata
    15481 tataataaca atattaattt aggtggtcct aatttaatgg atagatatga catttaatga
    15541 tagagataga agaggaaaag gtagagtaaa atgagaaaaa gtttagaaga gattaatgga
    15601 acggtcgcat atcatcgtga tgcaccgtca tggaaaaaag tgtttttctt tctcggaccg
    15661 ggtgcccttg tagcggtggg ttatatggat ccgggaaact ggatgacgtc gatggcaggt
    15721 ggtgcgcaat atggctatat cctgttatcg gtcattttaa tttcgagttt agctgcgatg
    15781 ttactccaaa gcatgtgtgc gcgtttaggt atcgcgagtg ggatggattt agcacaagtc
    15841 acacgtgcaa tgacttctaa aaaagtagca gtcgtgttat ggcttttcac agaacttgcg
    15901 attatggcga cggatattgc agaggttatc ggaagtgcga ttgcgttgaa tttacttttt
    15961 catattccat tatggctcgg tgtgacggtg acagtattag acgtcttttt acttttagcc
    16021 attattaaac tcggatttcg taaaattgag gcactcgtta cggtattagt gttaactgta
    16081 tttatcattt tcgtctttga agtttatttg tcagaccctg tatggggcga tgtgttcagt
    16141 ggatttttac cacagtcttc cgtcgtgaca caaccgggtg ctctatatat cgcattaggg
    16201 attatcggtg cgacgattat gccacataac ttatacttac attcatctat cgtccaatca
    16261 cgaaattatg aacgtcaatc agatgaagaa aaacgagaag ccattcgtta tgcgacgatt
    16321 gattcgaacg tccaactgtc actcgcattt atcgttaact gtttattatt aattttaggg
    16381 gcagcactat tttttggaag cggtgaagca cttggtggtt tttatgattt atatgatgca
    16441 ctgacacatt cggaagtatc tactgtaatt ggtggtgcgg tgatgagtac attgtttgcg
    16501 gtagcgttat tagcttcagg acaaaacgcc acaatcactg gcacgttatc aggccaaatt
    16561 attatggaag gtttcgttca tttgaaaatg gcacaatggc ttcgacgcct tgtgacacgt
    16621 attattgcgg tgattcctgt ctttttctgt ttatggttat acggttcgag tactgaaaaa
    16681 atcgaaaatc tactcatctt tacgcaagtc tttttaagtt tagccttacc tttaagcgtc
    16741 attccgttag tcatagcgac gaataatcct aaaattatgg gcaaagactt taccaatcca
    16801 cgttgggtca atctcattgc gtgggcatta gcgattatct taacaattct gaatatctat
    16861 cttatttacg cgacttttgg agaacttggt taatacggtt aagtcggggg cttgtacatg
    16921 cattgttcag gcccttaatt ttgtttgaaa aaatgtgaaa tgaatcgagt agattgtttt
    16981 aatatgtttc tttttgctct cagggcgcac acccactata aataaatata tattcgtaaa
    17041 tcatgcataa ataatcgaaa ttcaaatcgt taaataaatt tttaacattc tttatgt
//
LOCUS       DANHPA010000057        17088 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.057, whole genome shotgun sequence.
ACCESSION   DANHPA010000057 DANHPA010000000
VERSION     DANHPA010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 17088)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17088)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17088
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.057"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            51..755
                     /locus_tag="PTC28_001461"
     CDS             51..755
                     /locus_tag="PTC28_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDK5716745.1"
                     /translation="MAQRVLVVDDEQSIVTLLKYNLEQSGYVVEVAQDGEEALQKEKE
                     TKPDLIVLDVMLPKKDGIEVCKTIRSDKNQVPILMLTAKDDEFDRVLGLELGADDYMT
                     KPFSPREVVARVKAILRRSSLVDHVRKEEEDEDIVIGSIRIRPDFFEVYRNDELLELT
                     PKEFELLLYLVERQGRVITREHMLNSVWNYEFAGDSRIVDVHISHLRDKLEENPKQPQ
                     FIKTVRGLGYKLERPK"
     gene            756..2456
                     /locus_tag="PTC28_001462"
     CDS             756..2456
                     /locus_tag="PTC28_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HDK5716746.1"
                     /translation="MIKFYHKLLIILTTITVVSFLILGFIVHNSIYTKTVEYEKKSLL
                     KDAEQILAFYKAGNNQHIQELANHYHSNIKIIESDQTTEFKGERKLSIAERQDSLLRQ
                     LNTRNPIYQLDGKQGYYWFGHQQGETTILITGHFDMVYELQLQFWKYLILVGMIILAL
                     IYFTVRYINRTYIQPINEVSYAASLLTEGNFHVRLPESSVKELRELYVTINVLARRLE
                     QLNSEQKIQRNRLVTTLENIPSAILMIDKNGKIVIANKTFYEVFNASTNVENQDYARY
                     LHPTIKQLVVEGFRTEKAMYKQVEISINHIHQKFFDTSCVPILSRTKKSLQGMVIVLH
                     DITQLKKLENLRSEFVANVSHELKTPITSMKGFTETLIDGAKNDEASLDLFLNIILKE
                     SNRIQSLVEDLLDLSKIEQNTTLEKHLIDLSDVAKSSFSVIQPLANEKSIQLIDQIEP
                     NVTAMADENKISQVIVNLMTNAVNYSPENRTVTLAVYRENQHPVIEVIDQGIGIGEKE
                     KYRIFERFYRVDKARSRDSGGTGLGLSITKHIIEAYQGNIEVASELGKGSRFKVVLPE
                     "
     gene            3189..5816
                     /gene="polA"
                     /locus_tag="PTC28_001463"
     CDS             3189..5816
                     /gene="polA"
                     /locus_tag="PTC28_001463"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HDK5716747.1"
                     /translation="MDKLILIDGNSLSFRAFYALPLLKNKAGIHTNAVYGFARLLEKI
                     IKEEQPTHFLVAFDAGKTTFRHETYQDYKGGRQKTPPELSEQFPYIRQLIDAYQIQRY
                     ELENFEADDIIGTLSREADQAGMQTIIITGDRDLTQLATDQVTIYYTKKGVTDVDHYT
                     PQFIAEKYNGLTPSQIIDLKGLMGDSSDNIPGVAGVGEKTAMKLLNQFGTVEGVYDHI
                     EEVSGKKLKEKLENSRDDALMSKTLATINCDSPITVSLEDTRLPQKMDESAKIELFKS
                     LEFRQLLDGMDVEADNATASRDFVPTTNMSKVDFTQLSEAAIHVEVAGPNYLKDELLK
                     FGLYDGEQYVVIPFDKVNEYPELVAWLEDETTQKWVHDAKKTYIAMKRSDIAIENVVF
                     DTMLASYIIDPSRTIEDVHSVMTHFDQTFVQDDVSVYGKGKSFHIPEDGVLDKHIASI
                     LDAIHVVQPQMMTILEEHEQTSLLSEIELPLALILSEMEYIGIHTDIDTLKEMETVIQ
                     TELDQLIGQIHEQAGEKFNINSPKQLGVILFEKLELPVIKKTKTGYSTAVDVLEKLQN
                     AHPIIDNILTYRTLSKLQSTYVEGLQKVIWDDGRIHTRFNQTLAQTGRLSSVDPNLQN
                     IPIRLEEGRKIRKAFKSTHEDYVILAADYSQIELRVLAHITGDPTLQQAFNDNEDVHT
                     TTAMKVFNVAADEVTSLMRRQAKAVNFGIVYGISDYGLSQSLGITRKEAQRFIDDYLN
                     HFPGVKDYMDNIVQDAKQQGYVETLLKRRRYIPDITSRNFNLRGFAERTAMNSPIQGS
                     AADIIKLAMVQFHREVQKTSFKAQLLLQVHDELIFEVPKDEVDEFGKFVEEIMAHALQ
                     LDVPLSVESDYGKTWYDAK"
     gene            5836..6708
                     /gene="mutM"
                     /locus_tag="PTC28_001464"
     CDS             5836..6708
                     /gene="mutM"
                     /locus_tag="PTC28_001464"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HDK5716748.1"
                     /translation="MPELPEVEHVKRGITPHIMHQKVIDVTFSEPVKRGKLEGKETII
                     KGIDLDAFVKYTVGFEIADVQRRSKYILFRIENGNVERILISHLGMAGAFFVVQSLDD
                     IAIPNFRKHWQVVFHLENGIKLVYSDIRRFGEIRNVESLEAYPSILEIAPEPFEQEAL
                     AYYLAKSDEKKYLNKAIKPFILDHRVISGCGNIYACEALFDAQIHPEKKVKDLSIAEK
                     TKLFNSVVKVLEMGILNGGTSVADYVHADGQRGTMQDHLKVYKQKRCATCETAIETVI
                     ISGRNTHFCPNCQS"
     gene            6722..7345
                     /locus_tag="PTC28_001465"
     CDS             6722..7345
                     /locus_tag="PTC28_001465"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HDK5716749.1"
                     /translation="MPKVIGLTGGIATGKSTVAELLAIHGFKIVDADVAARKAVAKGT
                     EGLKKVQALFGDEAINEDGEMNRTFVGQQVFYDDEKRKQLNAIVHPIVGKMMNQERDQ
                     YLAEGHNVIMDIPLLFENHLEATVDEVWLVYASEPIQLDRLMARNDLSIEDAKARIYS
                     QISIDKKSRMADVVIDNLGSKLELKQNLEQILVDKGFLEAYHSDSEE"
     gene            7552..8568
                     /locus_tag="PTC28_001466"
     CDS             7552..8568
                     /locus_tag="PTC28_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HDK5716750.1"
                     /translation="MTTKIAINGLGRIGRMVLRVALNREDVEVVAINASYPPETIAHL
                     IKYDTTHGRFNQAVEPIEDGIQVNGKKIKLVSDRNPENLPWAALDIDIVVEATGKFNH
                     GDKADAHIRAGAKKVILTGPSKGGDVQTIVKGVNDQDIDTERYDIFSNASCTTNCLAP
                     IAKLLNDRFGIENGLMTTVHAVTNDQNNLDNPHKDLRRARAAFESIIPTSTGAAKALA
                     LVLPELEGKMHGMALRVPTKNVSLVDLVVDLKQSVTKEEVNQLFKDNDLNGVVAISDE
                     PLVSDDFTTDAHSAIVDTPSTIVMGDRKVKVLAWYDNEWGYSTRVVDVLQQIAAQIPS
                     TVAQ"
     gene            8766..9233
                     /gene="nrdR"
                     /locus_tag="PTC28_001467"
     CDS             8766..9233
                     /gene="nrdR"
                     /locus_tag="PTC28_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor NrdR"
                     /protein_id="HDK5716751.1"
                     /translation="MKCPKCNHTQSRVVDSRHADDMNAIRRRRECDNCGTRFTTFEHI
                     EMSPLIVVKKDGTREQFNREKILNGLVRSCEKRPVRFQQLEEITNQVEWKLREEGIAE
                     VSSRDIGEYVMNLLMHVDQVSYVRFASVYREFKDVDQLLQSMQGILKENKRSE"
     gene            9237..10610
                     /locus_tag="PTC28_001468"
     CDS             9237..10610
                     /locus_tag="PTC28_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaD domain protein"
                     /protein_id="HDK5716752.1"
                     /translation="MNHFMYQNQLSPHDGFIVMRPFQYHAVHYDILNRLFTPLIGAEA
                     IGVYQFLNQFESATFDQGFTHYTIMSELKLSLGRFREFLDLLEGIGLLKTFVRQSENT
                     TQFVYELIPPPTAERFFNDPMLSIYFYEAVGQERYHTLKNHFMPTQLDLAGFSNVTKK
                     FTDVFKVPKKQAVTSDVALKASQYQGVDLTDVTFDFELLADMLQTHYVSQTILSEPTK
                     SLIVQLATLYRLSPDVMKTIILKSLNADQSLSVKDLRKQAQSYYLMEHQQQLPSLQPQ
                     VTVTASEQTSEAQEETVSNWDEWFALMDQTSPIVMLTEYGGSEPPRYQKDMVEELVQR
                     EGFNFGVINILLQYVMQKTDNNLPEKYVYSVASTWKKSGVTDARSAYEKAMEIQKNQE
                     KSKQKRMESYSQNTNGPFYNKKEKQPRWVTHPEEYEQKEEDQEALEKDRAAFLKRLKQ
                     KRRAGED"
     gene            10610..11533
                     /gene="dnaI"
                     /locus_tag="PTC28_001469"
     CDS             10610..11533
                     /gene="dnaI"
                     /locus_tag="PTC28_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016425307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein DnaI"
                     /protein_id="HDK5716753.1"
                     /translation="MKSFNSIIGGNNAFEQKIQQIKKQVLADPDVKAFLAAHQSEVTN
                     RMIEEDLNILQEYKDQQKRYDGTHTYENCPNFVKGHIPELYIDQQHIKIRYKPCPCKI
                     RHDEEQNAKSMITSFHMHPDTLNAKIKDIYMTRRNRLDLAMQLDDLIDAIIEKRSVKG
                     FYLYGEFGTGKSFILGAIANELKNNRVPSMIIYVPEFIRTLKNGFKDGTTAKRIEQVR
                     EARVLFLDDLGAEDMTPWVRDEVLGPILHYRMIQELPTFFSSNMNLDELETHLADTKN
                     GVDRMKAKRIMERVKTLSTPYLLEGENYRKH"
     gene            11851..13788
                     /gene="thrS"
                     /locus_tag="PTC28_001470"
     CDS             11851..13788
                     /gene="thrS"
                     /locus_tag="PTC28_001470"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HDK5716754.1"
                     /translation="MAEIKVQFPDGNEKAFEKGTTTEEIAQSISPGLRKKAVAGKFNQ
                     QLVDLTRPLEEDGAIEIITPGSDEALEVLRHSTAHLMAQALKRLYGDVHFGVGPVIDG
                     GFYYDFDMEEKVSSDDFEKIEKTMKQIIEENHKVERQVVSRDEAKAFFANDPYKLELI
                     EAIPQDEQVTLYSQGEFTDLCRGVHVPSTSKIKAFKLLSTAGAYWRGDSNNKMLQRIY
                     GTAFFDKKDLKAHLQLLEERKERDHRRIGKEMELFTNNQLVGAGLPLWLPNGATIRRE
                     IERYIVDKEISLGYDHVYTPVMANVDLYKTSGHWDHYQEDMFPPMQLDADEAMVLRPM
                     NCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDAHIFVRP
                     DQIKEEFKRVVQMILDVYEDFGFEDYKFRLSYRDKADKEKYYDDDDMWNTAEAMLKEA
                     VDEMNLPYEEAIGEAAFYGPKLDVQVKTAMGKEETLSTAQLDFLLPKKFELTYIGKDG
                     EHHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPQQVEIIPVNNDLHYDYARQIH
                     DELKSQGVRVHIDDRNEKMGYKIREAQMKKIPYQLVVGDKELENNEVNVRQYGSKDQK
                     TVEKDTFIWDLVDEIRLKKQR"
     gene            14156..15664
                     /locus_tag="PTC28_001471"
     CDS             14156..15664
                     /locus_tag="PTC28_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDK5716755.1"
                     /translation="MSNEKTENQHAVQRHLKDRHISMIAIGGAIGTGLFMTSGGAIHD
                     AGPLGALLGYAIIGVMVFFLMTSLGEMATYLPVTGSFSTYATRFVDPSLGFALGWNYW
                     FNWVITVAADVTIAAQVIQYWAPLQFLPAWAWSCIFMVIIFSLNALSVKVYGESEYWF
                     AFIKVATVIVFIIVGLLTILGIMGGQAVGFDTFTTGDAPILGDGFGGSLLVVFGVFLV
                     AGFSFQGTELVGITAGESENPQRAVPKAIKQVFWRILLFYILAIFIIGMLIPYNSSAL
                     MGGGDDIATSPFTLVFKNAGLAFAASFMNAVILTSVLSAGNSGMYASTRMLYSMGKDG
                     LASKAFSRTNKNGTPILSMLSTALIVVLIFVLQHVSGDAYEYIVAASGLTGFIAWVGI
                     AVSHYRFRKAFAAQNYDVQKLKYQAKWFPFGPILAAVLCIIVIIGQDVDFIQTGDFDI
                     NRFLITYMGIPVFLAFFIYHKVRYKTKLIPLKDVNLDPNVETVEKNFQKNID"
     gene            15681..15818
                     /locus_tag="PTC28_001472"
     CDS             15681..15818
                     /locus_tag="PTC28_001472"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716756.1"
                     /translation="MIVSVEYETDQVEASRFSPVATQQAVGRLTIKHVVYVHVDVRSG
                     G"
     misc_feature    15706..15842
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00558"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L20 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00558"
     gene            15867..16394
                     /gene="infC"
                     /locus_tag="PTC28_001473"
     CDS             15867..16394
                     /gene="infC"
                     /locus_tag="PTC28_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HDK5716757.1"
                     /translation="MSTIAKDQTQVNEKIRAKELRVIGQNGDQIGLKSKNEALEMADR
                     LGLDVVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKIINVKEIRLSPTIEEHD
                     FNTKLKNGRKFLTKGDKVKVSIRFRGRAITHKEIGQRVLERYAEACQDLATIEQKPKM
                     EGRQMFLMLAPINEK"
     gene            16420..16620
                     /gene="rpmI"
                     /locus_tag="PTC28_001474"
     CDS             16420..16620
                     /gene="rpmI"
                     /locus_tag="PTC28_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HDK5716758.1"
                     /translation="MPKMKTHRGAAKRVKRTGSGQLKRSRAYTSHLFANKSTKQKRQL
                     RKASLVSKSDAKRVKQLLTYVK"
     gene            16695..17051
                     /gene="rplT"
                     /locus_tag="PTC28_001475"
     CDS             16695..17051
                     /gene="rplT"
                     /locus_tag="PTC28_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HDK5716759.1"
                     /translation="MPRVKGGTVTRARRKKTIKLAKGYFGAKSTLYKVAKQQVMKSGQ
                     YAFRDRRQRKRDFRKLWITRINAAARQHDMSYSRLMNGLKQAGIDVNRKMLSEIAISD
                     EKAFAELVNQAKAALK"
BASE COUNT         5707 a         2811 c         3691 g         4879 t
ORIGIN      
        1 aagactattt taaggtataa tgaagttaat cataataagg aggtacatat atggctcaaa
       61 gagtgcttgt cgttgatgac gaacaatcca ttgtcacttt gctaaaatac aacctcgaac
      121 aatcaggtta tgtcgttgaa gtggctcaag atggagagga agcgttacaa aaagaaaaag
      181 aaacgaaacc cgacttgatt gtattggatg tgatgttacc gaaaaaggat ggcattgaag
      241 tatgtaaaac gattcgctca gataaaaacc aagtacctat tttaatgtta actgcaaaag
      301 atgatgaatt tgatcgtgtg cttggtttag agcttggcgc tgacgattat atgactaagc
      361 ctttttcacc gagagaagta gtcgcacgtg tgaaagccat tcttcgtcgt tcatcattag
      421 tggatcatgt acgaaaagaa gaagaggatg aagatattgt tattggcagt attagaattc
      481 gtcctgactt ttttgaagta taccgtaatg atgagttgct agagttaacg ccgaaagaat
      541 ttgagttgct actttactta gttgaacgtc aaggtcgtgt cattacgcgt gaacatatgt
      601 taaattctgt gtggaactat gaatttgcag gtgattctcg aattgtggat gtacatatta
      661 gtcatttgcg agataagtta gaagaaaatc cgaagcaacc tcagtttatt aaaacagttc
      721 gcggtttagg atataaattg gagcgtccta aataaatgat taaattttac cataaacttt
      781 taatcatact tacaacaatc actgttgtaa gttttctcat attaggcttt attgtacata
      841 atagtattta tacgaaaacc gttgaatacg agaagaaatc gcttcttaaa gatgctgaac
      901 aaattcttgc attttataaa gcgggaaata atcaacacat tcaagaactc gccaatcatt
      961 atcatagtaa tattaaaatc attgaaagcg atcaaacgac ggaatttaaa ggggagcgga
     1021 aactttcgat agcagaacgt caagatagtc ttttgcggca acttaacacg agaaatccga
     1081 tttatcaact cgatgggaag caaggctatt attggtttgg acatcaacaa ggtgagacga
     1141 cgatactcat cacaggtcat ttcgatatgg tttatgaact ccaacttcaa ttttggaaat
     1201 acttaatatt agtagggatg atcattttag cgttgattta ctttacagtg cgttatatta
     1261 atcgaactta tattcaacct atcaatgaag tgtcctacgc tgcgtcactc cttactgaag
     1321 ggaattttca tgtcagattg cctgaaagca gtgtgaaaga gttgcgcgaa ttgtatgtga
     1381 caattaatgt gttggcacga cgtttagagc agttgaatag cgagcaaaaa attcaacgga
     1441 atcgtcttgt cacaacactt gaaaatattc ccagtgcgat attgatgatt gataaaaatg
     1501 gaaaaattgt tattgcgaat aagacgtttt atgaagtttt caatgcatcg accaatgtag
     1561 aaaatcaaga ttatgcgcga tatctacatc caacaattaa gcagctcgtc gttgaagggt
     1621 ttcgaactga aaaagcgatg tacaaacaag ttgaaatttc aattaaccat attcatcaaa
     1681 agttctttga tacatcgtgt gtgcctatct tatcgcgtac gaaaaagtcg ttacaaggga
     1741 tggtcatcgt attacatgat attacacaat tgaagaaact ggaaaactta cgtagtgaat
     1801 ttgtagcgaa tgtgtcacac gaattgaaaa caccgataac atcgatgaaa ggatttaccg
     1861 aaacacttat tgatggtgcg aaaaatgatg aagcctcttt agatttgttt ttaaacatca
     1921 tcttaaaaga atctaatcgc attcaatctc tagtagaaga tttattagat ttatcgaaaa
     1981 ttgaacagaa cacgacgtta gaaaagcact taattgattt gtcggatgtc gctaaatctt
     2041 cattttcagt cattcaacca cttgcgaatg aaaagtcgat acaattgatt gatcaaatag
     2101 agccaaatgt gacggcgatg gctgacgaaa ataaaatctc tcaagttatc gtgaatttaa
     2161 tgacgaatgc agtcaactat tctcctgaaa atcgaacggt cacattagcg gtatatcgag
     2221 aaaatcagca tccagtcatt gaagtgattg atcaaggcat cggtatagga gaaaaagaaa
     2281 agtatcgtat ttttgaaaga ttttatcgtg tggataaagc gagaagtcgt gattcaggtg
     2341 gcacagggtt aggcttgtcc attacgaaac atattatcga agcttatcaa gggaatatcg
     2401 aagtggcgtc tgaacttgga aaagggtcga gatttaaagt tgtgttacca gagtaatatg
     2461 ttcacaaaac gggaacagtg ataacgtaca cacagtcgtt aaaactgttc tcgcttttcg
     2521 ttataatcgg tatagaacat aaaaaacttg atgctattga tgccatattt ttgttaaact
     2581 tgccttccct acgaattgtg tttttgattg ccattatggc ttcactttac gagggagtgg
     2641 ccctaccact caattcggtt tgatttaaaa gaatacttaa tcgatgtcga attgtatttt
     2701 gggagcagta cagtaatccc atgcggaaca aagatttcac cgtactgcct ctgcaagggt
     2761 gactcgactt ctcaaaagct tatgcattga aaagtcagac agttactgag ataaacagta
     2821 accatgatta aagtaaagaa ttgattgtta gcagtatgca cacatctcct ctggcgtctc
     2881 agccttctgg acaatctggc attaaatata gtcacatagg gtaaagttat gaattgaaga
     2941 aaatcaatag catccatttt tatgtccaat tacaccttat tattcgcggg tataatcatc
     3001 attcatggat atgagtccat aaaagatcta gattagaaaa cttaatgtcc cagtcttata
     3061 tcgtatcaac tatggtacaa taggcattcc atttttgtta taaagtagaa gtgtgtgtta
     3121 cgcgctttat cgacatgata catacggatt atgataaaat agatacaaat cacgatggag
     3181 ggaataacgt ggacaaactt atattaattg atggtaatag tttaagtttt agagcttttt
     3241 atgcattgcc gttgttaaaa aataaagcag ggattcatac aaatgctgta tatggttttg
     3301 cgcgtttgtt agaaaagatt atcaaagaag aacaaccaac gcattttctc gtggcattcg
     3361 acgctggaaa aacgaccttt agacatgaga cgtatcaaga ttataaaggg ggccgtcaaa
     3421 aaacgccacc tgaattgagt gagcagttcc catatattcg ccaattaata gatgcctatc
     3481 aaattcaacg ttatgaactt gaaaactttg aagcagatga cattattgga acacttagtc
     3541 gtgaagcaga tcaagcgggc atgcaaacaa tcatcattac aggggaccga gatttaacgc
     3601 aacttgctac agatcaagtg acgatctatt atacgaaaaa aggtgtgacg gacgtcgatc
     3661 attacacacc acagtttatt gctgaaaaat ataatgggct tacaccgtct caaattattg
     3721 atttaaaagg cttaatgggt gatagttctg acaatattcc aggtgtggca ggtgtcggtg
     3781 aaaaaacagc gatgaaattg ttaaatcaat ttggaacagt tgaaggtgtt tatgatcata
     3841 ttgaggaagt atcaggtaaa aagctaaaag aaaagcttga aaatagtcgt gatgatgcgt
     3901 taatgagtaa aactttagcg acgattaatt gtgatagtcc gattacagta tcactcgaag
     3961 acacacgttt gcctcaaaaa atggatgaaa gtgctaaaat cgaactgttc aagtcgttag
     4021 aattccgtca gttgctcgat gggatggatg tcgaggcaga caacgctacg gcgagtcgag
     4081 attttgtccc aacgacaaac atgtcaaaag tagatttcac tcaattgtca gaagcggcca
     4141 ttcacgtaga agttgcggga ccaaactacc taaaagacga gttgttaaaa tttggtttat
     4201 acgatggcga acaatatgta gtgattccat ttgacaaggt caatgaatat ccagagttag
     4261 tggcttggct agaagatgaa acgacgcaaa aatgggtaca tgatgcgaag aaaacgtaca
     4321 ttgcgatgaa acgttcagac atcgccattg aaaatgtcgt ttttgataca atgttagcga
     4381 gctatattat cgatccgtca cgtacgattg aagatgtaca ttctgtcatg acgcattttg
     4441 atcaaacgtt tgtacaagat gatgtgtcgg tttatggtaa aggcaaatca ttccacatac
     4501 ctgaagatgg cgtactcgat aaacatatcg cttccatttt agacgcgatt catgttgtgc
     4561 aaccgcaaat gatgacgatt cttgaagagc atgaacagac atcattactc tcagaaatcg
     4621 agttaccact cgcgctcatt ttaagtgaaa tggaatatat cggtattcat actgacatcg
     4681 acacattaaa agaaatggaa acagtcattc aaacagagtt ggatcagtta ataggacaaa
     4741 ttcatgaaca agctggtgaa aaatttaata ttaattcacc taaacaatta ggcgtcattt
     4801 tatttgaaaa acttgagttg cccgttatta aaaaaacgaa aacaggttat tcaacagcgg
     4861 tcgatgtgct cgaaaaattg caaaatgctc atccaattat cgacaacatt ttaacgtatc
     4921 gtacgttatc gaaattgcag tcgacttatg ttgaaggttt acaaaaggtg atttgggatg
     4981 acggtcgcat tcatactcgt tttaatcaaa cacttgcaca aacgggacgt ctgtcttctg
     5041 ttgatccgaa cttgcaaaat attccaattc gtttagaaga ggggcgtaaa attcgtaaag
     5101 cgtttaagtc tacgcacgaa gattatgtca ttcttgcggc ggattactca caaatcgaat
     5161 tacgtgtttt agcacatatt acaggagacc caacgttgca acaagcgttt aatgataatg
     5221 aagatgttca taccacaaca gcgatgaaag tgtttaacgt tgcagctgat gaagtcacat
     5281 cattaatgcg tcgtcaagca aaagcagtaa actttggtat cgtctatggc attagtgatt
     5341 atggactcag tcaaagttta ggtatcacac gtaaagaagc acagcgattc attgacgatt
     5401 acttgaacca ttttccaggt gtgaaagatt atatggacaa cattgtgcaa gatgccaaac
     5461 aacaaggtta tgtggagaca ttattaaaac gtcgtcgtta cattcctgac attacgagtc
     5521 gtaactttaa cttacgtgga tttgctgaac gaactgcgat gaactcacca attcaaggaa
     5581 gtgcggcaga tattatcaaa ctagcgatgg tgcaattcca ccgtgaagta caaaagacat
     5641 catttaaagc tcagttatta ttacaagtac atgatgaact gatttttgaa gtgccgaaag
     5701 atgaagtaga tgaattcggc aaatttgttg aggaaattat ggcgcatgca ttacaattag
     5761 atgtcccatt aagtgtagaa tcagattatg ggaaaacgtg gtatgatgca aaatagaaag
     5821 taggtatgac aatcaatgcc agaattacca gaagtcgaac atgtcaaacg tgggattacg
     5881 ccgcatatta tgcaccaaaa ggttatagat gtgacgtttt ctgaacctgt caaacgcggc
     5941 aagttagaag ggaaagaaac gataattaaa gggattgacc ttgatgcttt tgtgaagtat
     6001 acggtcggtt ttgagattgc tgatgtgcaa cgccgcagta aatatatttt atttcgtatc
     6061 gaaaatggga atgttgaacg tatattaatt tctcatttag ggatggcagg tgcattcttt
     6121 gtcgtgcaat cgctcgatga cattgcgata ccgaattttc gaaagcattg gcaagttgtt
     6181 tttcatttag aaaatggtat taaattagtc tattcagata ttcgccggtt tggtgagatt
     6241 cggaatgtcg aaagtttaga ggcttaccca tcaattttag agattgcacc tgaacctttt
     6301 gaacaagagg cgttagccta ttatcttgct aaaagtgatg aaaagaaata tttaaacaaa
     6361 gcgattaaac cctttatact ggatcatcgt gtgatatcgg gttgtggcaa tatttatgcg
     6421 tgtgaagcgc tgtttgatgc acaaattcat ccggagaaaa aagtaaaaga cttgtcaata
     6481 gcggaaaaga caaagttatt taatagtgta gtaaaagttt tagaaatggg tattttaaat
     6541 ggtgggacaa gtgtggcaga ttatgtacat gctgatggtc aaagaggtac tatgcaagat
     6601 catttgaaag tatataaaca aaagcgctgt gcaacgtgtg aaacagcgat tgaaacggtt
     6661 attatttcag gacgaaatac acatttttgt ccaaattgcc aaagttagga taggtgaaat
     6721 tatgcccaaa gttattggat taacaggtgg aattgctact ggaaaatcga cagtggcaga
     6781 gttactcgca atacatggtt ttaaaatcgt cgacgcagat gttgcagcaa gaaaagcagt
     6841 tgctaaaggg acggaaggtt taaaaaaagt tcaagcgcta tttggcgatg aagcgatcaa
     6901 tgaagatggc gaaatgaatc gtacctttgt cggacaacaa gtgttttatg acgatgaaaa
     6961 aagaaaacaa cttaatgcga ttgtgcatcc tattgtcggc aaaatgatga atcaagagcg
     7021 tgaccaatat ttagcagagg gacataatgt tattatggat attccactgt tatttgaaaa
     7081 tcatttagaa gccacggtag atgaagtttg gctcgtttat gcgtctgaac cgatacaact
     7141 cgatcgatta atggcgcgta atgacttgtc tatagaagat gccaaagcaa gaatctatag
     7201 tcaaatttca attgataaaa agagtcgcat ggcggatgtc gtcattgata atttaggttc
     7261 aaagttggaa ttaaaacaaa atttagaaca gattttagta gacaaaggat ttttagaagc
     7321 ttatcatagt gactcagaag aatagtggat gataactgac gtaaatatct atataaattc
     7381 aggagcttag acatgcgttt gtctcagctc ctgaattttt tacgctttat gattgttttg
     7441 gctgatgaag tacaataaca aaaaataata gtggaaaacg gtttcatttt atcgcaatta
     7501 tgatatactg ttgattataa gtataacaca ttgataagga gtgctttaaa catgacgaca
     7561 aagattgcga ttaacggtct ggggcgtatc ggccgtatgg ttttaagagt ggcattaaat
     7621 agagaagatg ttgaggttgt agcgattaat gcaagctatc cacctgaaac gattgcgcat
     7681 cttattaagt atgacacaac acacggacgc tttaatcagg cggttgaacc gattgaagat
     7741 ggcattcaag tgaacggtaa aaaaattaaa cttgtgtcag atcgtaatcc tgaaaattta
     7801 ccatgggcag cattggatat cgatatcgta gtagaagcaa caggtaaatt taatcatggc
     7861 gataaagcag atgcccacat tcgtgcaggt gctaaaaagg tgattttaac agggccttca
     7921 aaaggaggag acgtgcaaac gattgttaaa ggtgtcaatg accaagatat cgatacagaa
     7981 cgttatgaca tttttagtaa cgcatcttgt acgacaaact gtttagcacc gattgcaaaa
     8041 ttattaaatg atcgttttgg aatcgaaaat ggcttaatga caacagtaca tgctgtgaca
     8101 aatgaccaaa acaatttaga taatccgcac aaagatttac gtcgtgcgcg tgcagctttt
     8161 gaaagcatca ttccaacatc aacaggtgca gcgaaagcac ttgcacttgt tttaccagaa
     8221 cttgaaggaa aaatgcatgg gatggcgtta cgggtgccta ctaaaaatgt ttcactcgtt
     8281 gacctagtcg tcgatttaaa acaatctgtg actaaagaag aagtgaatca attatttaaa
     8341 gacaatgatt tgaatggtgt cgtcgctatt tcggatgaac cactagtgtc ggatgatttt
     8401 acgactgatg cacattcagc aattgtcgac acaccttcaa caatcgtcat gggagatcgt
     8461 aaagttaagg tactcgcatg gtatgacaat gaatggggtt attcaacgag agttgtcgat
     8521 gtattacaac aaatcgctgc tcaaataccg agcacagtcg cacaataaat caaatacaaa
     8581 aaagtcgatg agaattgaat catcgacttt tttgtatgtc tggatattaa tgtttcaaaa
     8641 tggaacgtat ccatttatcg tcagtcaaga cacaatgata cttgtcagtt atcacctaac
     8701 ttttgaaatc atgtcgtttc atagtataat gaaacaaaaa ctatgactaa gaaggtgaca
     8761 aagtcgtgaa atgtccaaaa tgcaatcata cccaatctcg agtagtggat tcgagacatg
     8821 cagatgatat gaatgcaatt agaagaagac gtgaatgtga caattgtggt acacgtttca
     8881 ctacttttga acatatagaa atgagtccgc tcatcgtcgt caaaaaagac ggtacacgtg
     8941 aacagttcaa tagagaaaaa atattaaatg gcttagtgcg ctcgtgtgaa aagcgaccag
     9001 tccgttttca acaattggaa gaaattacga atcaagttga atggaaattg cgtgaagaag
     9061 gtattgctga agtgtcttct agagacatag gggagtatgt catgaattta ttaatgcatg
     9121 ttgaccaagt ctcttatgtt cgatttgctt ctgtgtaccg ggaatttaaa gatgtggatc
     9181 aattattaca atctatgcaa gggatattga aagaaaacaa gcggagtgaa taacgaatga
     9241 atcattttat gtatcaaaat cagttgagtc cgcacgacgg gtttatcgtc atgcgtccat
     9301 ttcaatatca tgcagtgcac tatgatattt taaatcggtt attcacaccg ttaattggcg
     9361 ctgaagcaat cggtgtgtac caatttttga accaatttga gtctgctaca ttcgaccaag
     9421 ggtttacaca ttatactatt atgtccgagt taaaattaag cctcggtcgt tttagggagt
     9481 ttttagattt gttggaaggc attggcctgt taaaaacgtt cgtccgtcaa tctgaaaaca
     9541 cgacacaatt tgtgtatgaa ctcatacctc cgcctacagc agaacgtttt tttaatgatc
     9601 cgatgttgtc gatttatttt tatgaagctg tcggacagga acggtatcat acattgaaaa
     9661 atcattttat gcctacacaa ctcgatttgg caggattttc aaatgtgacg aaaaagttca
     9721 cggatgtttt taaagtgcct aagaaacaag cggtcacttc agatgtagca ctcaaagcat
     9781 cgcaatatca aggtgttgat ttaacagatg tgacgtttga ttttgaattg ttggctgata
     9841 tgttgcagac gcattatgtg agccaaacga ttttatcaga accgacaaaa tcgcttattg
     9901 tgcaattggc gacattgtat cgtttatcgc ctgatgttat gaaaacgatt attttgaaat
     9961 cgctcaatgc agaccagtct ttatccgtta aagatttacg taaacaagca caaagttatt
    10021 atttaatgga acatcaacaa caattaccat cattacagcc gcaagtgaca gtgactgctt
    10081 cagaacaaac gtctgaagca caagaagaaa cggtctcgaa ttgggatgaa tggtttgctt
    10141 taatggatca aacgagtccg attgtcatgc ttacggaata tggaggttct gaaccgccgc
    10201 gttatcaaaa agacatggtg gaagaattag tacaacgtga agggtttaat tttggagtca
    10261 tcaatatatt attgcaatat gtgatgcaaa aaacggataa taacttgccg gaaaaatatg
    10321 tctattccgt tgcttcaacg tggaaaaaaa gtggtgtgac ggacgcgcgt tctgcatatg
    10381 aaaaggcgat ggaaattcaa aaaaaccagg aaaaatcaaa gcaaaaacga atggaaagct
    10441 attctcaaaa cacaaatggt ccattttata acaaaaaaga aaagcaaccg cgttgggtga
    10501 cacatccaga agaatacgaa caaaaagaag aagatcaaga agcattggaa aaagatcgtg
    10561 cagcgttctt gaaaagatta aaacaaaaga gaagggcggg tgaagattaa tgaaaagctt
    10621 taatagtatc atcggtggta acaatgcttt cgaacaaaag attcaacaaa ttaaaaagca
    10681 agtattagcg gatccagatg taaaagcatt tttagctgca caccaatctg aagtaacgaa
    10741 tcgaatgatt gaggaagatt tgaacatctt gcaagaatat aaagatcagc aaaagcgtta
    10801 cgatgggaca catacgtatg aaaattgtcc taatttcgtg aaaggtcaca ttccggaatt
    10861 gtatattgat caacaacaca tcaaaattcg ttacaagcct tgcccatgta aaatcaggca
    10921 cgacgaggaa caaaatgcga aaagtatgat tacgtcattt catatgcatc cagatacgtt
    10981 aaacgccaaa attaaagata tttatatgac gcgacgcaat cgtttagatt tagcaatgca
    11041 attagacgat ttaatcgatg ccattattga aaagcgttcg gtcaaaggtt tttatttata
    11101 tggtgaattc ggtacaggaa agtcatttat tttaggtgcg attgcgaacg agttgaaaaa
    11161 taatcgagtc ccttcgatga ttatttatgt gccagaattt attcgaactt taaaaaatgg
    11221 ttttaaagat ggaacgacag caaaacgtat tgaacaagtt cgtgaagcgc gtgtattatt
    11281 tttagacgat ttaggtgctg aagatatgac gccttgggta cgtgatgagg tgctcggtcc
    11341 aattttgcat taccgtatga ttcaagaact accgacattt ttcagctcaa atatgaattt
    11401 agatgaatta gaaacacatt tggctgatac gaaaaatggt gttgatcgaa tgaaagcgaa
    11461 acggattatg gaacgtgtga aaactttgag cacgccttat ttgcttgaag gagaaaatta
    11521 tcgtaagcat tgaaaatttt aaaattagcg ttataatatg tatataaatc aataatgttg
    11581 ctaaagtttg aggatatgat atcggtatca ctatggtaca gggaactact gtgattgaga
    11641 atgtagtgca tagtcatcga tgttactccc tctatagata aatggtgttt gtaatgaatg
    11701 cccggctcaa gaccgttatc ttatgtagag atgtcacagg ataggtatgt gacaaattag
    11761 ggtggtaaca cgaaaacctc gtcccttatg ttgggatggg gttttttatt ttcttcaatt
    11821 ttaagcaaaa atgtgaaatg gaggatcatt atggcagaaa ttaaagtgca gttcccagat
    11881 ggtaatgaaa aggcgtttga aaagggtacg acaacagaag aaattgcgca atccattagt
    11941 ccagggttac gaaaaaaagc cgttgcaggt aaatttaatc aacaattggt cgatttaaca
    12001 cgtcctttag aagaagatgg cgcaattgaa attattacgc cgggtagtga cgaagcgtta
    12061 gaagtgttac gacattccac agcgcattta atggcacaag cattaaagcg attgtacggt
    12121 gatgtacatt tcggtgtcgg cccagtgatt gatggtggct tctactatga tttcgatatg
    12181 gaagaaaagg tttcaagtga tgatttcgag aaaattgaaa agactatgaa acaaattatt
    12241 gaagaaaatc ataaagtcga gcgtcaagtt gtttcaagag atgaagcgaa ggcatttttt
    12301 gcaaacgatc catataaatt ggaattaatt gaggcgattc cacaagacga acaagtgaca
    12361 ttgtacagtc agggtgaatt cactgattta tgtcgaggcg tacacgtccc aagtacatcg
    12421 aaaattaagg cgttcaaatt gttatcaact gctggtgcgt attggcgtgg tgacagtaat
    12481 aataaaatgt tgcaacgtat ttatggtaca gcatttttcg acaagaaaga cctaaaagca
    12541 catcttcaat tgttagaaga gcgtaaagag cgtgaccacc gccgcatcgg taaagaaatg
    12601 gagctcttca caaacaatca acttgtcggc gcaggtttac ctttatggct accaaatggt
    12661 gcaacaatcc gccgtgaaat cgaacgttat attgtagaca aagaaattag cctcggctat
    12721 gaccacgtct atacacctgt gatggctaat gtcgatttgt acaaaacatc agggcactgg
    12781 gatcattacc aagaagacat gttcccgcca atgcaactgg atgcggatga agcgatggta
    12841 ctgagaccga tgaactgccc acaccatatg atgatttatg ctaacaagcc ccattcatat
    12901 cgtgagttgc caattcgtat tgcggaactt ggtacaatgc accgttatga agcaagtggt
    12961 gctgtatcag gattacagcg tgtgcgtggg atgactttaa acgatgcgca tatcttcgtg
    13021 cgaccagacc aaattaaaga agagttcaag cgtgtcgttc aaatgatttt ggatgtatat
    13081 gaagactttg gttttgagga ttacaaattc cgtttaagtt atcgtgataa agcggataaa
    13141 gaaaaatatt atgacgatga tgacatgtgg aacactgctg aagcgatgtt aaaagaagca
    13201 gtagatgaaa tgaacttacc gtatgaagaa gcgatcggtg aagcggcgtt ctacggtcct
    13261 aaattagatg ttcaagtgaa aacggcgatg ggtaaagaag agacattgtc gacagcgcaa
    13321 cttgacttct tattaccgaa aaagtttgaa cttacttaca ttggtaaaga tggcgaacat
    13381 catcgaccag tcgtcattca ccgtggtgtg gtttctacga tggaacgttt cgtagccttt
    13441 ttaacagaag aaacaaaggg ggcgttccca acttggttag caccacaaca agttgagatt
    13501 attccagtta acaacgactt gcattacgat tacgcacgtc aaattcacga cgaattaaaa
    13561 tctcaaggtg tccgtgtgca tattgatgac cgtaatgaaa aaatgggtta taaaatccgt
    13621 gaagcgcaaa tgaagaagat cccatatcaa cttgttgtcg gggataaaga acttgaaaac
    13681 aatgaagtca atgtccgtca atacggttca aaagaccaaa aaactgttga aaaagataca
    13741 ttcatttggg acttagtcga tgaaattcgt ttgaaaaaac aaagataatg ttgataggtg
    13801 cacgactatc atgtatagta ataaatgaaa caatttataa tacgatttga ttgagttaga
    13861 ggcgcaactt tgatgagtag cggttgggtt gtatgatggt acaaagcccc aacatgtgaa
    13921 aggtaaagtt gccgaaacgg aaatggacca tcgccatttc tcgttgggct agtgttcgaa
    13981 aggcgctaga ctgtcacaaa tgtgatgtgc taccgattca taaataataa gcagcggtgg
    14041 catcaacata gatgtcatca ctgcttttat tttttactag gttgaatgat ttgatattta
    14101 acgagcttca cacaatttgt cttaacctct aagcaattag gaaaggatta agaaaatgag
    14161 taatgaaaaa acagaaaatc aacacgcagt tcaacgccat cttaaagacc gtcatatttc
    14221 gatgatcgcg attggtggtg cgattggaac tggactgttt atgacatctg gaggcgctat
    14281 tcatgatgca gggcctttag gtgcactttt aggctatgcg ataatcggtg tgatggtgtt
    14341 ctttttaatg acatcactag gggaaatggc gacgtatcta cctgttacgg gttcgtttag
    14401 cacatatgcc acgcgttttg tcgatccgtc tttaggtttt gctttaggat ggaactattg
    14461 gtttaactgg gtcattacag tagcggccga cgttacgatt gctgctcaag tcatccaata
    14521 ttgggccccc ttacaatttt tacctgcttg ggcatggagt tgtatcttca tggtgattat
    14581 ttttagcctt aatgccttgt ctgtcaaagt atatggtgaa agtgaatatt ggttcgcatt
    14641 catcaaagtg gcgacggtga ttgtctttat tattgtaggt ttattgacaa ttttaggaat
    14701 tatgggcggt caagcagtgg gctttgatac atttacaact ggtgacgcac caatcttagg
    14761 tgacggtttt ggtggtagtt tactcgttgt gttcggcgtg ttcttagtcg ctgggttctc
    14821 gttccaaggt actgagttag tggggattac tgcaggtgag tctgaaaatc ctcagcgtgc
    14881 cgtaccgaaa gcaattaagc aagtgttctg gagaatttta ctcttttata ttttagcaat
    14941 cttcattatc gggatgctta ttccttacaa ttcttctgcc ttaatgggcg gtggggatga
    15001 cattgcaact tctccattta cactcgtctt taaaaatgca ggactcgcgt ttgctgcctc
    15061 atttatgaat gccgtaattt taacatctgt attatcggcg ggtaactctg ggatgtatgc
    15121 aagcacacgt atgctgtatt cgatggggaa agacggactc gcatctaaag catttagtcg
    15181 tacaaataaa aacggcacac caatcttgtc gatgttatct acagcgctga ttgttgtgtt
    15241 gatttttgta ttacaacatg tcagtggcga tgcgtacgaa tatattgttg cagcgagtgg
    15301 tctgacaggc tttatcgcat gggtaggtat tgcggtcagt cattatcgtt tccgaaaagc
    15361 gtttgcggca caaaattacg atgttcaaaa attaaagtat caagcgaagt ggttcccatt
    15421 tggtccgatt ctcgcagctg tgctttgtat tattgttatc atcggacaag atgttgattt
    15481 tattcaaacg ggtgattttg atatcaatcg atttttaatt acttatatgg gtataccagt
    15541 atttttagcg ttcttcatct atcataaagt ccgctataaa acgaaattga ttccattaaa
    15601 agacgtcaac ttagatccga atgtggaaac agttgaaaaa aactttcaaa aaaacattga
    15661 ctaatataca ctgagttggt atgattgtat ctgttgaata cgaaacggac caagtagaag
    15721 catcccgctt ctcacctgta gcgacgcaac aagctgttgg caggttaacg attaaacatg
    15781 tagtgtatgt tcatgttgac gtgagaagcg ggggttagat accctcgctt tttttcgtac
    15841 ttggaccatt cgtaaacttt ttggaggtgt caaccatagc taaagatcaa acgcaagtta
    15901 acgaaaagat tcgcgcaaaa gaattacgtg tcatcggaca aaatggtgac caaatcggat
    15961 tgaagtctaa aaatgaagca ttggaaatgg cagatcgact tggtttggat gtagtcgttg
    16021 ttgcgccaaa tgctaaacca cctgttgctc gtattatgga ttacggcaaa tacaaattcg
    16081 agcaacagaa aaaagaaaaa gagatgaaga agaaacaaaa aatcatcaac gttaaagaaa
    16141 tccgtttaag ccctacgatt gaagaacacg acttcaatac gaagcttaaa aacggacgca
    16201 agtttttaac aaaaggtgac aaagttaaag tttcaattcg tttcagaggg cgtgcgatta
    16261 cgcataaaga aattggacaa cgcgtgttag agcgatatgc tgaagcgtgc caagaccttg
    16321 caacaatcga gcaaaagccg aaaatggaag gtcgtcaaat gttccttatg ttagccccaa
    16381 ttaatgaaaa ataaaaagtg ataataggag gaaaacatca tgcctaaaat gaaaacccac
    16441 cgcggagctg cgaaacgtgt aaaaagaact ggatctggtc aacttaaacg ttctagagca
    16501 tacacttcac acttattcgc taacaaatct acaaagcaaa agcgtcaatt acgtaaagct
    16561 tcattagtat caaaaagcga tgcaaaacgt gtaaaacaat tattaacata cgttaaataa
    16621 tcattctaaa gtacgaaaat atatgagagg tatggcagaa gcgcataccg tagagataaa
    16681 aggaggagtt tattatgcca cgtgttaaag gtggaacagt aacaagagcg cgtcgtaaaa
    16741 agacaatcaa attagctaaa ggttacttcg gtgcgaaaag cacattatat aaagttgcaa
    16801 aacaacaagt tatgaaatca ggtcaatatg cattccgtga ccgtcgtcaa agaaaacgtg
    16861 atttccgtaa attatggatt acacgtatca atgcggctgc acgtcaacac gacatgagtt
    16921 actctcgttt aatgaacggt ttaaaacaag cgggtatcga cgttaaccgt aaaatgttat
    16981 cagaaatcgc aatctcagat gagaaagcat ttgctgaatt agtaaatcaa gcgaaagcag
    17041 ctttaaaata gtagagaaag agttggggtc tattgtgacg cgccaact
//
LOCUS       DANHPA010000058        16969 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.058, whole genome shotgun sequence.
ACCESSION   DANHPA010000058 DANHPA010000000
VERSION     DANHPA010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 16969)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16969)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16969
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.058"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            28..513
                     /gene="lspA"
                     /locus_tag="PTC28_001476"
     CDS             28..513
                     /gene="lspA"
                     /locus_tag="PTC28_001476"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HDK5716760.1"
                     /translation="MKQQYYIGLSLFITLIILIGDQLTKFIIRTQMTLGESFAVVPKF
                     LYITSHRNNGAAWGILSGKMTFFYIITIIVLIALIVFYIKEAKNNMLMQIAISLLFSG
                     ALGNFIDRVISGEVVDFIDTVIFGYDFPVFNIADASLTIGVVLLIIVLLKDQNQKGKV
                     S"
     gene            513..1430
                     /locus_tag="PTC28_001477"
     CDS             513..1430
                     /locus_tag="PTC28_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDK5716761.1"
                     /translation="MEKHIFNIEDATHHLQRIDKILPEFNSEWSRSQLQEWIKEGLIE
                     VNGKAVKSNYKLKLGDRIEITEKEVVEADIQAENLNLDIYYEDDDVAIVYKPKGMVVH
                     PSPGHYTGTLVNGLMYQIKNLSGINGEIRPGIVHRIDKDTSGLLMVAKNDVAHRSLVE
                     QLMAKTVKRKYIALVHGHIPHEFGTIDAPIGRNKNDRQSMAVVDDGKEAVTHFNVIET
                     FKNYTLVECELETGRTHQIRVHMKYIGYPLVGDPKYGPKKTLEIGGQALHAGLIGFEH
                     PKTGEYIERFAPLPAEFEAVIEQVRKEDI"
     gene            1716..2240
                     /gene="pyrR"
                     /locus_tag="PTC28_001478"
     CDS             1716..2240
                     /gene="pyrR"
                     /locus_tag="PTC28_001478"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HDK5716762.1"
                     /translation="MVERVVLDESAIKRTVTRIAHEILEYNKGTENLVLLGIKTRGEY
                     LAQRIQQKIQQIEEVQIPTGAIDITSFRDDIDSRQQQDAPGFNIDTDLNHQVVIIVDD
                     VLYTGRTVRASLDAILLHARPKKIGLATLVDRGHRELPIRADFVGKNIPTSHEESVNV
                     YLEEIDDRNAVVIT"
     gene            2418..3710
                     /locus_tag="PTC28_001479"
     CDS             2418..3710
                     /locus_tag="PTC28_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil permease"
                     /protein_id="HDK5716763.1"
                     /translation="MENEQMFTRTVQPVLDVNEKPKAGQWVFLSLQHLFAMFGATVLV
                     PFLTGLPVSSALLASGVGTLLYILITKGKIPAYLGSSFAFITPIITGLSTNSLGDMLV
                     ALFMSGVMYVIIGVAIKVSGTDWLMHLLPPVVVGPVIMVIGLSLAPTAVNMAMFESSA
                     EMKGYNLSFVAVAGITLLVTLIVQGFAKGFFSLIPVLIGIIVGYITAIVFGIVDFKPV
                     AEAAWFQFPDIYIPFADYQPSVHLGLIAVMLPIVFVTVSEHIGHQMVINKIVGRNFFK
                     DPGLHRSIIGDGVSTMFSSIIGGPPSTTYGENIGVLAITKIYSIYVIGGAAVIAIMLG
                     FVGKFTALISSIPTPVMGGVSILLFGTIAASGLRMIVESQVNFAQNRNLVIASVILVI
                     GIGNMMLNLSDLGVHLTIEGMALSATAGILLNLILPKS"
     gene            3732..4610
                     /locus_tag="PTC28_001480"
     CDS             3732..4610
                     /locus_tag="PTC28_001480"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HDK5716764.1"
                     /translation="MQHLVSMEHLAVEEIENLIQKAMQYKAGEAVPNLKGRYIANLFF
                     ENSTRTKCSFEMAEHRLDMKQINFESSASSVQKGESLYDTCRTLQSIGCDALVIRHEQ
                     NHYYEPLLNMGIPIINAGDGSGQHPTQSLLDLMTIYETYGRFEGLKVVICGDIKNSRV
                     ARSNYHSLTALGAKVVFSSPDVWKDDSMAADYVELDDVIDEVDIVMLLRVQHERHAGV
                     SQGFEKEEYHRRYGLTEERYATLQDHAIVMHPAPVNRDVEIADKLVEAPKSRIFEQMS
                     NGVYIRMAVLTEILNG"
     gene            4626..5900
                     /locus_tag="PTC28_001481"
     CDS             4626..5900
                     /locus_tag="PTC28_001481"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HDK5716765.1"
                     /translation="MKLIQNAKMLEAGTLKKVDVLIEGKTVKQIAETIEPTEDMTVID
                     AKGHFLAPGFIDVHVHLREPGGEYKETIETGTKAAARGGFTTVCPMPNTKPVPDSLEH
                     LTQLNELIDKNAQVRVLPYASITVRQAGKEHVDFKALAENGAFAFTDDGVGVQEAAMM
                     YEAMQQAKAQNKAVVAHCEDNSLIYGGAMHEGRRSQELGIPGIPNICESVQIARDVLL
                     SEATGCHYHVCHVSTKESVRVIRDAKKAGIPVTAEVTPHHLLLTEDDVPGDNAIYKMN
                     PPLRSQEDRAALLEGLLDGTIDCIATDHAPHAADEKAQPMTRAPFGIVGSETAFPLLY
                     THFVKNGDWSLQQLVDYLTTKPAEVFGLPYGKLAEGALADLTLINLDDAYEIKAEDFL
                     SKASNTPFLGETVYGNPILTMVEGNIRYEEAK"
     gene            5903..7003
                     /locus_tag="PTC28_001482"
     CDS             5903..7003
                     /locus_tag="PTC28_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl phosphate synthase small subunit"
                     /protein_id="HDK5716766.1"
                     /translation="MFEKRYLVLEDGSHYTGFKLGSDKLTRGEIVFNTAMTGYQETIS
                     DPSYTGQIITFTYPLIGNYGINHDDFESLTPSLNGVVVKEACTMPSNFRAQKSFDDVL
                     KEYDIPGISGVDTRSITKKIRQHGVLKAAFVDDPSEIETTVTALKTAEFPRTEVPTVS
                     TKTPYVSTGFDLRVVLVDFGKKQNIVRELNARGCEVTVVPYDTSADTIIKMAPDGVML
                     SNGPGDPDDVTVALDMINGILGRIPFFGICLGHQLFALSQGAKSFKMKFGHRGANHPV
                     KDLATGKIALTSQNHGYAIDADSVAATDLEITHIALNDGTVEGLKHRTLPAFSVQYHP
                     EACPGPTDSNYLFDQFVEMMQQNKQKERVTHA"
     gene            6996..10169
                     /gene="carB"
                     /locus_tag="PTC28_001483"
     CDS             6996..10169
                     /gene="carB"
                     /locus_tag="PTC28_001483"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HDK5716767.1"
                     /translation="MPKRNDIQTILVIGSGPIIIGQAAEFDYAGTQACLALKEEGYRV
                     ILVNSNPATIMTDKEIADKVYIEPLTHDFIARIIRKEQPDALLPTLGGQTGLNMAIEL
                     HNSGVLAENNVTLLGTKLSSIEQAEDRELFRSLMNDLNVPVPESDIVNTLEQAFAFKE
                     AVGYPLIVRPAFTMGGTGGGICHNDEELREVVSNGLKYSPATQCLIEKSIAGFKEIEY
                     EVMRDKNDNAIVVCNMENIDPVGIHTGDSVVVAPSQTLSDVEYQMLRDVSLKVIRALE
                     IEGGCNVQLALDPHSMQFYIIEVNPRVSRSSALASKATGYPIAKLAAKIAVGLTLDEM
                     KNPVTGTSYAAFEPSLDYIVSKIPRFPFDKFEKGERELGTQMKATGEVMSIGRTYEES
                     LLKAIRSLEYGVHHLGLPNGESFDLEYIKARIQAQDDERLFFIGEAIRRGTTLEELHE
                     MTKIDYFFLNKFKNIIDMEHALKAHPGDIDYLRFAKRFGFSDRVIAHRFEMTEAEVYK
                     LRQQHNICPVYKMVDTCAAEFESTTPYFYGTYEEENESLVTEKEKIIVLGSGPIRIGQ
                     GVEFDYATVHAVWAIQNAGYEAIIINNNPETVSTDFSISDKLYFEPLTEEDVMNIINL
                     EQPKGVVVQFGGQTAINLADKLAKYGVKILGTSLEDLNRAEDRKEFEALLNKIDVPQP
                     KGKTATSAQEALDNARDIGYPVVVRPSYVLGGRAMEIVYNDAELENYMNEAVKASPEH
                     PVLVDRYLTGKEIEVDAISDGETVMIPGIMEHIERAGVHSGDSIAVYPPQTLSQDVID
                     TLEAYTIKLAKGLNVIGLINIQFVLAHDGVYVLEVNPRASRTVPFLSKITEIQMAQLA
                     MQAIMGQKLTALGYQSGIQPYKEGVFVKAPVFSFNKLKNVDITLGPEMKSTGEVMGRD
                     ITLEKALYKGLTAAGMEVKDYGTALITVSDKDKEEMVKIAKRLSEVGYKIVATAGTAA
                     TLKDHGINVETVGKIGGHDDLITKIQDGSVQLVINTMTKGKTIERDGFQIRRASVENG
                     VPCLTSLDTANALTNVIESMTFSMRNM"
     gene            10183..10947
                     /locus_tag="PTC28_001484"
     CDS             10183..10947
                     /locus_tag="PTC28_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase electron transfer
                     subunit"
                     /protein_id="HDK5716768.1"
                     /translation="MEKLTVVSNAPIAERIYELTVKGPVVEKLQQPGQFVHIKAGEGS
                     LHMLRRPISICHIDQAQQQFTMLFRAEGEGTKRIAALNEGDEIDILAPLGNGFPVDKA
                     KKKAILVGGGIGVPPLYELSKQLNERGIETVHVLGFRSAKDVFYQQQFEALGETHIVT
                     EDGSLGTTGFVTTVIDALPVDYDIFYTCGPLPMLKALTQLETLKDVPGYISLEERMGC
                     GVGACFACVCHVPESPIDYVKVCTDGPVFERGAVVL"
     gene            10944..11864
                     /locus_tag="PTC28_001485"
     CDS             10944..11864
                     /locus_tag="PTC28_001485"
                     /EC_number="1.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HDK5716769.1"
                     /translation="MSRLEVEIPGLSLKNPIMPASGCFAFGAEYGQFYDLSELGAIMI
                     KAATKEARFGNETPRVAETDSGMLNAIGLQNPGVHHIIDHELKALVQHDVPIIANVAG
                     SMEEDYVYVAEHISKAPNVKALELNISCPNVKEGGMQFGVDPTIASELTRKVKAVSEV
                     PVYVKLSPNVTNIVEMAEAIAQYADGLTMINTLVGMRIDARTGKPIIYNVTGGLSGPA
                     IKPVALRMVHDVRKALPDIPIIAMGGVQNAQDVIDYVSVGADAVAVGTANFQNPMVCK
                     EIIDNLPEYLDGLNVHHISELKGRTLKGLQ"
     gene            11866..12570
                     /gene="pyrF"
                     /locus_tag="PTC28_001486"
     CDS             11866..12570
                     /gene="pyrF"
                     /locus_tag="PTC28_001486"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HDK5716770.1"
                     /translation="MRQDPIIALDFATEAEVMSFLAQFDEPLFVKIGMELFYQTGPAL
                     IDQIKALGHDIFLDLKLHDIPNTVGKAMEGLAKLNVDLVNVHAAGGTVMMQRAVEGLR
                     RHNKAIKIIAVTQLTSTSEQQLHEEQNIQTSMETAVLNYASLAQQAGLDGVVCSPLET
                     TMIREHCGDDFLKVTPGIRLANSAKDDQQRITTPEKARQLGSTHIVVGRPITQNDNPV
                     QSYHQIKESWLNACQN"
     gene            12558..13166
                     /locus_tag="PTC28_001487"
     CDS             12558..13166
                     /locus_tag="PTC28_001487"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HDK5716771.1"
                     /translation="MSKLIAKALLDIEAVSLSPNEMYTWSSGIQSPIYCDNRVTLGYP
                     EVRTAIRDGLIELIEQHFADVEIVSGTATAGIPHAAYISDKMNLPMNYVRSKSKSHGK
                     QNQIEGARSEGKKVVVIEDLISTGGSSITAVEALQEAGAEVLGVVAIFTYGLNKAGET
                     FKAAGVPFYTLSNYDELIEVAREEDQISEDDIQTLVEWRNQL"
     gene            13601..14014
                     /locus_tag="PTC28_001488"
     CDS             13601..14014
                     /locus_tag="PTC28_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDK5716772.1"
                     /translation="MKIPKITTFLMFNGDAEEAIQRYTSLFEDSEIITMVKYDDTIPE
                     QAGKVQHSIFTLNGQVFMAIDNMNGTDIEMNPAMSLYVTVKDQFEMDTLYHGLKDGGA
                     ILMPKTAMPPQFREFAWVQDKFGVNFQLALPESKK"
     gene            complement(14098..15801)
                     /locus_tag="PTC28_001489"
     CDS             complement(14098..15801)
                     /locus_tag="PTC28_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NFACT family protein"
                     /protein_id="HDK5716773.1"
                     /translation="MAFDGMFTRKMVEDLQFLVSGRIHKINQPENDTIIMVIRQQRQN
                     HHLLLSIHPNFARIHLTTKKYDNPFEPPMFARVFRKHLEGGRILAIRQIGNDRRIEMD
                     VESKDEIGDTIHRTVILEIMGKHSNLILVNEERKILEGFKHLTPNTNQFRTVMPGFQY
                     EVPPTQHKQNPYAYTGTQVLQHIDFNAGKIDRQLLQMFEGFSPLITKEITSRRHYMTT
                     QTLPEAFDEVMAETKATPQPVFHKNNETGKEDFYFMKLHQFYDDCVTYDSLHELLDRF
                     YDARGERERVKQRANDLVKLVQQLLQKYQNKLSKLVDEQAGTEEKENQQLYGELITAN
                     IYQLKPGDRQLETMNYYTGENVTIPLNPQKSPAENAQYYYKQYNRMKTRERELTHQIT
                     LTEENIAYFENIEQQLSHIQVHEIDDIREELAEQGFIKQKKQQKKKKQQKIQLQSYVS
                     TDGDTILVGKNNKQNDYLTNKRAQKSHLWFHTKDIPGSHVVILNDAPSDKTIEEAAMI
                     AAYFSKAGQSGQIPVDYTIIRNVHKPSGSKPGFVTYDNQKTLYATPDYDMIRRLKAEE
                     A"
     gene            15961..16584
                     /gene="gmk"
                     /locus_tag="PTC28_001490"
     CDS             15961..16584
                     /gene="gmk"
                     /locus_tag="PTC28_001490"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDK5716774.1"
                     /translation="MDTEKGLLIVLSGPSGVGKGTVRKRIFDDPHTSYKYSISMTTRQ
                     MREGEQDGVDYFFKTREEFEKLIEADEFIEYAEYVGNYYGTPVQYVKDTMNAGHDVFL
                     EIEVEGAKQVRKKFPDALFIFLAPPSLDHLTERLIGRGTESKEKIESRVKEAKKEVEM
                     MNLYDYVVVNDEVDLAKDRIQSIVEAEHLKRERIEAKYRKMLLEAKK"
     gene            16584..16793
                     /locus_tag="PTC28_001491"
     CDS             16584..16793
                     /locus_tag="PTC28_001491"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HDK5716775.1"
                     /translation="MLYPPLHHLQDKINSKYLIATTAAKRARELQADPDHLLLDRYES
                     KKTVGRALEEIAASKIHPHVDESHF"
BASE COUNT         5382 a         3111 c         3690 g         4786 t
ORIGIN      
        1 cagtgactaa cagaaaggac agaaagtatg aaacaacaat attacattgg cctatcgctc
       61 tttattacat taatcatctt gataggcgac caactgacta aattcattat ccgtacacaa
      121 atgacgttgg gtgagtcatt tgcagtagtt ccaaaatttt tatacattac ttctcatcgc
      181 aataatgggg ccgcttgggg tatactaagt gggaagatga cattctttta tattattacg
      241 ataatcgttt taattgcgct cattgtcttt tatattaaag aagcgaaaaa taatatgctg
      301 atgcaaattg cgataagcct gttgttttcg ggcgcgttag gtaattttat tgatcgtgtc
      361 attagcggtg aagtggtgga ctttatagat acagtcattt tcggttatga ttttcctgtt
      421 tttaatattg cagatgcgag tttgacaata ggtgtggtct tgttgattat tgtattatta
      481 aaagatcaga atcaaaaagg taaggtgtcg taatggaaaa acatatattt aatattgaag
      541 acgcaacgca tcatttacag cgtattgaca aaatattgcc tgaattcaat tcggagtggt
      601 cacgcagtca attacaagag tggattaaag aaggattaat tgaagttaat ggtaaagctg
      661 tcaagtcgaa ctataaacta aaattaggtg accgtataga aatcactgaa aaagaagtgg
      721 tagaagcaga tattcaagca gagaacttaa atttagacat ttactacgaa gatgacgacg
      781 tggcgattgt ttataaacct aaaggcatgg tcgttcaccc atcgccaggg cattatactg
      841 ggacgcttgt aaatggttta atgtatcaaa tcaaaaattt atcaggtatt aacggtgaaa
      901 ttcgtccagg tatcgtgcac cgtatcgata aagatacttc agggttactg atggttgcga
      961 aaaatgacgt ggcacatcgc agtttagttg aacaattgat ggcaaaaact gtgaaaagaa
     1021 agtatattgc gctcgtacat ggccatattc cacatgagtt tggaacgatt gatgcaccta
     1081 tcggacgcaa taaaaatgac cgtcaatcga tggctgtcgt tgatgacggt aaagaagctg
     1141 tgacgcattt taatgtcatt gaaacgttta aaaactatac attggttgaa tgcgaactcg
     1201 aaacaggacg tacgcaccaa attcgtgtgc atatgaagta tatcggttat ccgcttgtag
     1261 gcgatccgaa atatggtccg aaaaagacgt tagaaatagg cggacaagct ttacatgcgg
     1321 gtcttatcgg ttttgaacat cctaaaacag gggaatacat tgaacgtttt gcgccgcttc
     1381 ctgcagaatt tgaagctgtc attgaacaag tgcgtaaaga agatatttaa gtaaaatttt
     1441 aaaaaatagc cagatttgct ttgacttttg gtgttaaaaa cgttaccata agaacaagtc
     1501 aaaaacgaat aaaaactgaa tcgtctttaa gagggagtcc cgtgaggctc aaaagacatg
     1561 atatcaatcc ttcaatttag agaactatca tatagatgct gcatcgtacg tacgagagac
     1621 gtaatggtac agtttttgat agtctttcat attaaattgc ttaaaactca tgtctactta
     1681 aaggcatgag tttttttacg taaggagtga aaggattggt tgaacgtgtt gtattagacg
     1741 aatctgccat caaacgcaca gtaacacgta ttgcccatga aatattggaa tacaataaag
     1801 gcacagaaaa ccttgtatta ctcggtatta agacgcgcgg tgagtattta gcgcaacgta
     1861 tacaacaaaa gattcaacag attgaagagg tccaaatccc aacaggagca atcgatatta
     1921 caagttttag agatgatatc gattcgcgcc aacaacaaga tgcaccagga tttaacatcg
     1981 acactgattt gaatcatcaa gtggttatta ttgtggacga tgtgctttat actggacgta
     2041 cagtacgtgc ttcacttgat gcgattttac ttcatgcgag accgaaaaag attggtttag
     2101 cgacactcgt ggatcgtggt catcgagagc taccgattcg tgcagatttt gtagggaaaa
     2161 atattccaac gtctcatgaa gaatctgtca atgtttacct agaagaaata gacgatcgca
     2221 atgcggttgt catcacataa tgacaccttt taattcagta cgagagactg acaaaggtat
     2281 aattgcaaat agagccaatg acgtacgttt acggccgccg attatggtcg gtgtatgtgt
     2341 gtatatctgt ttgtaatcac ctcagtctct taccttaatt ggtgaagagg ctttttttat
     2401 aagaaaggaa gaaaacaatg gaaaatgaac aaatgtttac gagaacggtt caaccggtac
     2461 tcgatgtgaa tgaaaaacca aaagcggggc aatgggtatt tttaagtctt caacatttat
     2521 ttgcgatgtt cggtgcaaca gtattagtac cgtttttaac aggcttacct gtatcatcag
     2581 cgttactcgc atcaggcgta ggaacattac tctacatctt gattacaaaa ggcaagattc
     2641 cagcgtatct cggttcaagt tttgcgttta tcacaccgat tattaccggt ttaagtacga
     2701 atagcttagg tgatatgctc gttgcattat tcatgagtgg tgttatgtac gttatcatcg
     2761 gggttgcgat caaagtgagt ggcacagact ggctcatgca tttattacca cctgtcgttg
     2821 tcggtccagt cattatggtg attggtttaa gtttagcacc gactgctgtc aacatggcga
     2881 tgtttgaaag ttcagctgag atgaaagggt acaatttaag ctttgtagcc gtggcaggga
     2941 ttaccttact tgtgacattg attgttcaag gatttgcgaa aggctttttc tcgctcattc
     3001 cagtgttaat cggtatcatc gtcggctaca ttacagcgat agtgtttggc attgtagatt
     3061 tcaaacctgt cgcagaggcc gcttggttcc agttcccaga tatttacatt ccatttgcag
     3121 attatcaacc ttccgtgcat ctcggattaa ttgcagtgat gctcccaatc gtgtttgtaa
     3181 cggtgagtga acatatcgga caccaaatgg tcatcaacaa aatcgtcggc cgtaacttct
     3241 ttaaagatcc gggactacac cgctccatca tcggtgacgg ggtatcgaca atgttttcaa
     3301 gtatcatcgg ggggccaccg agtacgactt atggtgaaaa tatcggtgta cttgcgatta
     3361 cgaaaattta cagtatttac gtcataggcg gtgcggcagt tatcgccatt atgcttggct
     3421 ttgttgggaa attcacagca ctgatttcat ctatccctac accagtaatg ggtggtgtgt
     3481 ctatcttatt attcgggact atcgcggcaa gtggcttacg tatgattgtc gaaagtcaag
     3541 tcaactttgc gcaaaaccgt aacttagtca tcgcgtcagt cattctcgtc atcggtatcg
     3601 gtaacatgat gttgaattta tctgatttag gtgtacatct cacaattgaa gggatggcat
     3661 tatcagcaac agcagggatt ttactgaact taattttacc aaaaagttaa ttataggagg
     3721 ccttgattat tatgcaacat ctcgtatcaa tggaacattt agctgtagaa gaaattgaaa
     3781 acttaattca aaaagcgatg cagtataaag caggagaagc ggtaccgaat ttgaaaggac
     3841 gttacattgc gaacttgttt ttcgaaaatt cgacacgtac gaaatgtagt tttgaaatgg
     3901 cagaacaccg tttggatatg aagcaaatca actttgaatc aagtgcctct tctgtacaaa
     3961 aaggggaatc gctgtatgac acatgccgaa cattacaaag cattggctgt gatgcacttg
     4021 tcatccgaca cgaacaaaat cattactacg aacccttgtt gaatatgggg attccgatta
     4081 ttaatgcagg ggatggcagt ggccagcatc cgacgcaaag cttattggac ttaatgacga
     4141 tttacgaaac atatggtcgt tttgaaggac taaaagtggt catttgcggt gacattaaaa
     4201 actcacgagt ggcacgtagt aattaccata gtttaactgc acttggtgca aaggtcgttt
     4261 tctcaagtcc tgacgtttgg aaagatgaca gcatggctgc agattacgtt gaattagatg
     4321 atgtgattga cgaggtcgac attgtaatgt tattacgtgt ccaacatgaa cgacatgcag
     4381 gcgtttcaca aggttttgaa aaagaagaat atcaccgtcg ttatggtttg actgaagaac
     4441 gatatgccac acttcaagat catgcgattg tgatgcaccc cgcaccagta aatcgcgatg
     4501 tagaaattgc agataaatta gtagaagcac cgaagtcacg tatttttgaa cagatgtcaa
     4561 atggtgtgta cataagaatg gcagtattga ctgaaatttt aaatggttaa ggagcgatta
     4621 ggatgatgaa attaattcaa aatgcaaaga tgttagaagc aggtacgttg aaaaaagttg
     4681 atgtattaat cgaaggcaag acagtgaaac agattgcaga aacgattgaa ccaactgaag
     4741 acatgacagt cattgatgca aaaggtcact ttttagcgcc aggttttatc gatgtccatg
     4801 tgcatttgag agagccaggt ggcgaatata aagaaacgat tgaaacaggc accaaagcag
     4861 cggcacgtgg aggttttaca acggtttgtc ctatgccaaa tacgaaacct gttcctgatt
     4921 cgttggaaca tttaacacag ctgaatgaat taattgacaa aaatgcacaa gttcgtgtcc
     4981 taccgtatgc ctctattaca gtacgtcaag caggaaaaga gcatgtcgat ttcaaagcgt
     5041 tagctgaaaa tggcgcattt gcattcacag atgatggggt cggtgttcaa gaagcggcga
     5101 tgatgtatga agcgatgcaa caagcgaagg cacaaaataa agcagtcgtt gcacactgcg
     5161 aagataatag tcttatctat ggtggtgcca tgcatgaagg ccgccgcagt caagagcttg
     5221 gcattccagg tattccaaat atttgtgaat cggtacaaat cgcgcgtgac gtgttactga
     5281 gtgaagcaac aggatgtcat tatcacgtgt gccacgtatc aacgaaagaa agcgtgcgtg
     5341 tcattcgtga tgcgaaaaaa gcaggtattc cagtgacagc ggaagtgacg ccacaccatt
     5401 tattactgac agaagatgat gtgccaggag ataatgcgat ttataaaatg aatccgcctt
     5461 taagaagtca agaagataga gcggcgttat tagaaggctt acttgacggt acgattgact
     5521 gtattgcgac agaccacgca ccacatgcag cagacgaaaa agcacaaccg atgacacgtg
     5581 caccattcgg cattgtcggc agtgaaacag cattcccatt actttataca cactttgtga
     5641 aaaatgggga ttggtcatta caacaactcg ttgattactt gacaacaaaa ccagctgaag
     5701 tgttcggtct cccttatggc aagttagcag agggtgcact tgcagattta acattaatca
     5761 acttagacga tgcgtacgaa attaaagcag aagatttctt atcaaaagcg tctaacacac
     5821 cattcttagg tgaaacagta tacggtaatc ctattttaac tatggttgaa ggcaacattc
     5881 gttacgagga ggcaaaataa acatgtttga gaaacgttac cttgttttag aagatggttc
     5941 acattataca ggttttaagt taggatctga caaattaaca cgcggtgaaa ttgtattcaa
     6001 cactgcaatg acaggttatc aagaaaccat ttctgacccc tcatatacag gccaaatcat
     6061 tacatttacg tatcctttaa tcggtaatta cggcattaac cacgatgact ttgaatcact
     6121 tacaccaagc cttaatggtg tcgtcgtgaa agaagcgtgc acaatgccga gtaactttag
     6181 agcacagaaa tcatttgacg atgtattgaa agaatatgat attccaggta ttagtggcgt
     6241 ggatacgcgc agcatcacga aaaaaattcg tcaacatggt gtgctcaaag cagcatttgt
     6301 cgatgatcca tcagaaattg aaacaactgt gacagcactc aaaacagcag aatttccaag
     6361 aactgaagtg ccaactgtct ctacgaaaac gccttacgtc tcaacaggat ttgacttgcg
     6421 cgttgtactt gtggacttcg gaaagaagca aaatatcgtc cgtgaattga atgcacgtgg
     6481 ctgtgaagta acggtcgtac catatgacac ttctgcagat acaattatta aaatggcgcc
     6541 agacggtgtc atgttatcaa acggtcctgg tgatccggat gacgtgacag ttgcacttga
     6601 tatgattaac ggtattttag ggcgcattcc atttttcggc atttgtcttg gtcatcaact
     6661 ttttgcgctc agtcaaggtg cgaaatcgtt caagatgaaa ttcggacatc gaggtgccaa
     6721 ccatcctgtt aaagatttgg cgacaggtaa aatcgcactt acaagtcaaa accacggtta
     6781 tgcaatcgac gcggattccg tggctgcaac agatttagaa attacacata tcgccttaaa
     6841 tgatggcacc gttgaaggct tgaaacaccg cacgttacca gccttttcgg tacaatacca
     6901 tccagaagct tgcccaggtc caacagattc taattactta tttgatcaat ttgtagaaat
     6961 gatgcaacaa aataagcaaa aggagcgcgt tacacatgcc taaaagaaat gatattcaaa
     7021 cgattttagt gattggctca ggtcctatca tcattggtca agcagcagaa tttgactatg
     7081 cagggacaca agcatgtctc gcactcaaag aagaaggtta ccgtgtcatt ttagttaact
     7141 caaaccctgc gacgattatg acggataaag aaatcgctga caaagtttac atcgaaccgc
     7201 tcacacacga ttttattgca cgcattatcc gtaaagaaca accggatgca cttttaccga
     7261 cgctcggtgg acaaacaggg ctcaacatgg cgattgaatt acataatagt ggcgtcttag
     7321 ctgaaaataa cgtcacactg ctcggtacga aattgtcatc tattgaacaa gcagaagacc
     7381 gtgaattgtt tcgctcgtta atgaatgact tgaatgtacc agtacctgaa agtgacattg
     7441 tgaatacact tgaacaagcc tttgcattta aagaagcagt cggttatccg ttaatcgtac
     7501 gtccagcatt tacgatgggc ggtacagggg gcggcatttg tcataatgat gaagaactcc
     7561 gtgaagtcgt ttctaacgga ttaaaatata gtccggctac gcaatgttta attgaaaagt
     7621 cgatcgcagg ctttaaagaa attgaatatg aagtgatgcg tgacaaaaat gataacgcga
     7681 ttgtcgtatg taacatggaa aacattgatc cagtcggtat tcatacgggt gactcagtcg
     7741 ttgttgcacc aagtcaaaca ttgtcagacg tggaatatca aatgttgcgt gacgtgtcat
     7801 taaaagtcat tcgtgcacta gaaattgaag ggggatgtaa cgtacagctc gccttggatc
     7861 cgcattcgat gcagttttac attatcgaag tgaatccgcg cgtgtcccgt tcgtcggcac
     7921 tcgcttcaaa agcaacaggg tatccgattg cgaaactcgc tgcgaaaatt gcggtaggtc
     7981 tgacgctaga tgagatgaaa aatccagtta ctggcacatc ttatgcggca ttcgaaccaa
     8041 gtttagacta tatcgtatcg aaaatcccac gttttccatt cgataagttc gaaaaaggtg
     8101 aacgcgaact cggtacacaa atgaaagcga caggggaagt catgtcgatt ggtcgcacgt
     8161 acgaagaatc tttattaaaa gcaattcgct ctttagaata cggcgtgcat caccttggct
     8221 tacctaatgg tgaatctttt gacttagagt acattaaggc acgtattcaa gcgcaagatg
     8281 atgaaagatt gttcttcatt ggtgaagcga ttcgtcgtgg cacaacactt gaagaattac
     8341 atgaaatgac gaaaatcgat tacttcttct taaataaatt caaaaatatt atcgatatgg
     8401 aacatgcatt gaaggcacat ccaggcgata ttgattactt aagatttgca aaacgttttg
     8461 gttttagcga ccgcgtcatt gcacatcgtt ttgaaatgac agaagcagaa gtgtataagt
     8521 tacgtcaaca gcacaacatt tgccctgtgt ataaaatggt cgatacgtgt gcagcagagt
     8581 ttgaatccac aacaccttac ttttatggta cctatgaaga agaaaatgaa tcgctcgtca
     8641 ctgaaaaaga gaaaattatc gtactcggtt cagggcctat tcgtatcggt caaggggtag
     8701 aattcgacta tgcgacagtg cacgctgtat gggcaattca aaatgctggt tatgaagcga
     8761 ttattattaa caataacccg gaaacggtat cgacagactt ctcaatttca gacaagttgt
     8821 atttcgagcc actcacagaa gaagatgtga tgaacatcat taatctagaa caacctaaag
     8881 gcgtcgtcgt gcaattcggt ggtcaaacag cgatcaactt agcggacaaa ttagcgaaat
     8941 acggcgtaaa aattttaggt acatcacttg aagatttaaa ccgtgctgaa gaccgtaaag
     9001 aatttgaagc attactgaac aaaatcgacg tgcctcaacc gaaagggaaa acagcgacat
     9061 cggctcaaga agcactcgat aatgcacgtg atatcggcta tcctgttgtg gtccgtccat
     9121 catacgtgct cggtggccgt gcgatggaaa ttgtgtacaa tgatgcagaa cttgaaaact
     9181 atatgaatga agcggtgaaa gccagtccag aacatcccgt actcgtggac cgttatttaa
     9241 caggtaaaga aattgaagtg gatgccattt ctgacggaga aacagttatg attccaggaa
     9301 taatggaaca tatcgagcgt gcaggtgttc actcaggtga ctctatcgca gtatatccgc
     9361 cacaaacgtt aagtcaagac gtcattgata cgttggaagc ttatacaatc aaattggcga
     9421 aagggctcaa cgttatcggt ttaatcaata tccaattcgt cctcgcacat gatggggttt
     9481 atgtgttaga agtgaatccg cgagcgagcc gtactgtgcc atttttaagt aaaattacag
     9541 aaattcaaat ggcacaactc gcaatgcaag cgattatggg tcaaaaacta acagcgctcg
     9601 gttatcaatc aggcattcaa ccgtataaag aaggggtatt tgttaaagca ccggtattca
     9661 gctttaataa attgaaaaat gtcgacatca cacttggacc tgaaatgaaa tcaacaggag
     9721 aagtgatggg tcgcgacatt acgttagaaa aggcgctata caaaggatta acagcagcag
     9781 ggatggaagt caaagattac ggtacagcat tgattaccgt cagcgataaa gataaagaag
     9841 aaatggttaa aattgcgaag cgtttaagtg aagtaggcta caaaatcgtg gcaacagcag
     9901 gcacagccgc tacgttgaaa gatcatggca tcaacgttga aacggtagga aaaattggag
     9961 gccacgacga tttgattaca aaaattcaag acggttcagt ccaacttgtc attaacacga
    10021 tgacaaaagg taaaacaatt gaacgtgacg gattccaaat ccgccgtgca tcagttgaaa
    10081 atggggtgcc ttgtctcact tcactcgata cagcgaacgc attaacaaat gttattgaaa
    10141 gcatgacatt ttcaatgaga aatatgtagg aggtcaaaag cggtggaaaa attaacagtg
    10201 gtttcaaatg cacctattgc agaacgcatt tatgaattaa cagtcaaagg gccggttgtt
    10261 gaaaaacttc agcaacctgg tcagttcgtg catattaaag ctggagaagg ctcattacac
    10321 atgttgcgtc gaccgatttc gatttgtcat atcgatcaag cgcaacaaca atttacaatg
    10381 ctatttcgtg ctgaagggga aggcacaaag cgtattgctg ccttaaatga aggcgacgaa
    10441 attgatattt tagcaccact aggtaatggt tttccagtag acaaagcgaa gaaaaaagct
    10501 atactcgtcg gagggggcat cggtgttccg ccgctttatg aactttcgaa acaactcaat
    10561 gaacgaggca tcgaaacagt acatgtttta ggtttccgtt ctgctaaaga tgtgttttat
    10621 caacaacaat ttgaggcatt aggagaaacg cacattgtga cagaagatgg ctcattaggt
    10681 acaacaggtt ttgtcacaac ggtcattgat gcacttccag tcgattatga cattttttac
    10741 acgtgtgggc cgttacccat gttaaaggcg ttaacacagt tagaaacgtt gaaagatgtg
    10801 ccgggttaca tttcattaga ggagcgcatg ggctgcggtg tcggtgcatg ctttgcgtgt
    10861 gtttgtcacg taccagaaag tccaatagat tatgtgaaag tgtgtacaga tggaccagta
    10921 tttgaaagag gggcggttgt actatgagtc gattagaagt agaaattcca ggattatcgt
    10981 taaaaaatcc gattatgccg gcaagtgggt gtttcgcatt cggtgcggaa tacggtcagt
    11041 tttacgattt gtctgagtta ggggccatca tgattaaagc tgcaacgaaa gaagcacgtt
    11101 ttggcaatga aacgccacgt gtcgcggaaa cagatagtgg gatgttgaat gcgattggac
    11161 tgcaaaatcc aggcgtccat catattattg atcatgaact taaagcatta gtacaacacg
    11221 atgttccaat tattgcgaat gtagccggct cgatggaaga agactatgta tacgtagctg
    11281 aacacatttc caaagcacca aatgtgaaag cgttagaact gaatatctcc tgtccaaacg
    11341 taaaagaagg tggcatgcag ttcggtgtag acccgaccat cgcctctgaa ttaacacgta
    11401 aagtaaaagc agtgtctgaa gtacctgttt atgtgaaact gtcgcctaat gtaacaaaca
    11461 ttgttgaaat ggcggaagcg atcgcacagt atgcagacgg tttaacgatg attaatacac
    11521 ttgtcggtat gagaattgac gcgcgcacag gcaaaccgat tatttataac gttacgggtg
    11581 gtttaagtgg gccagcgatt aagccagtcg cattaagaat ggtgcatgac gttcgtaaag
    11641 ctttacctga tattccaatt atcgcaatgg gtggcgtcca aaatgcgcaa gacgtcattg
    11701 attacgtgtc agtcggtgca gatgcagtgg cagtcggaac agcaaacttc caaaatccaa
    11761 tggtctgcaa agaaattatc gataatttac ctgaatattt agatggctta aatgtgcatc
    11821 atatttcaga acttaaaggt cgtacattga aaggattgca gtaacatgag acaagatccg
    11881 attatcgcct tagattttgc aaccgaagca gaagtaatgt catttttagc gcaatttgat
    11941 gaaccattat tcgtcaaaat tggtatggaa ttattttatc agacgggacc agcactcatt
    12001 gatcaaatta aagcactcgg gcatgacatc tttttagact taaaattgca cgacattccg
    12061 aatacggtcg gtaaagcgat ggaaggtctt gcaaagttga acgtggatct cgtcaatgtc
    12121 catgcagctg gtggtacagt catgatgcaa cgtgcagtgg aagggttacg tcgacacaac
    12181 aaagctatta aaatcatcgc cgtcacacaa ttaacatcta catctgaaca acagttgcat
    12241 gaagaacaaa acatccaaac gtcgatggaa acagccgtct taaactatgc tagccttgcg
    12301 caacaagcag gcttagatgg tgtcgtatgt tcaccgttag aaacgacaat gattcgcgaa
    12361 cattgtggcg acgacttctt aaaagtgaca ccaggtattc gtctagctaa tagtgcaaaa
    12421 gacgatcagc aacgcatcac aacacctgaa aaagcacgtc agctcggttc gacacatatt
    12481 gttgtcggtc gcccgattac acaaaacgac aatccagtac aaagttatca tcaaattaaa
    12541 gaaagttggt taaatgcatg tcaaaattaa tcgcaaaagc attattagat atcgaagccg
    12601 tatcattatc accgaatgaa atgtatacat ggagttccgg tattcaatca cctatttatt
    12661 gtgataaccg tgtcacactc ggatatccag aagtacgtac cgcgatccgt gacggcttaa
    12721 ttgaactgat tgaacaacat tttgctgatg tcgaaatcgt ttcaggaaca gcaacagccg
    12781 gcattccaca tgcggcatat atttcagata aaatgaattt gccaatgaat tatgtgcgtt
    12841 caaaaagtaa aagtcatggc aagcaaaatc aaattgaagg cgcgcgcagt gaaggtaaaa
    12901 aagtagtggt cattgaagat ttaatttcaa ctggtggctc ttccatcaca gctgttgaag
    12961 cattacaaga agcgggtgct gaagtgttag gtgtcgttgc aattttcaca tacggtttaa
    13021 ataaagctgg cgaaacgttt aaagcagccg gtgtcccttt ctatacgtta agcaactatg
    13081 acgagctaat tgaagtcgca cgtgaagaag accaaatttc agaagatgac attcagacat
    13141 tagtcgaatg gcgtaatcaa ttataagcag aaaaagaagc tggttcatat ccccagcttc
    13201 tttttgtatt tgttaatata acgaattagt tgtgaactgc acaataaaac attactgaaa
    13261 acctattgtg atgagaagaa aatcctccta tacgccatcg tttaggttta gcgttcgatg
    13321 acttctttta aacgtgtaaa ctattatctt aagtaccaac gtaaaaagag ccaaccgcca
    13381 attaagatca ataaaaatac taaaagaggg attaataaat gcatactaat cataaaataa
    13441 cctccaaaaa tgatttaaca ctattgtaac cggttataat atagagtgaa agcaaaaaca
    13501 acagaaatag aaataaacac ttcacagtat gacgcagttg taactgatga ttgtgaattt
    13561 caaaatgaaa gtatcgcttg acatttgagg aggaccggtt atgaaaatac ctaaaattac
    13621 gacgttttta atgtttaatg gtgacgctga agaagcaatt caacgttata catcattatt
    13681 tgaagatagc gagattatta caatggtgaa atacgatgac acgattccag aacaagcagg
    13741 aaaagtacaa cattctattt ttacattaaa tggtcaagtc tttatggcga ttgataatat
    13801 gaatggcaca gatattgaaa tgaacccagc gatgtcattg tatgtgacag tgaaagatca
    13861 atttgaaatg gatacattat atcatggttt aaaagatggt ggcgcgatat taatgccgaa
    13921 aacagcaatg ccaccacaat ttcgtgaatt cgcctgggtt caagataaat tcggcgtgaa
    13981 cttccaactc gccttaccag aatcaaagaa ataacaatag aataagataa gcaaaaatcc
    14041 gagtctttcg ttacgtgtga cgaaaaggct cggattttta tgttgatatt taatctttta
    14101 cgcttcttca gctttcaatc gacgaatcat gtcataatcc ggcgttgcgt aaagcgtctt
    14161 ctggttatcg tacgttacaa atccaggttt actgccactc ggcttatgca cattgcgaat
    14221 tattgtataa tccactggaa tttgtcccga ttgccccgcc tttgaaaagt acgctgcaat
    14281 catcgccgct tcttcaatcg ttttgtcact tggcgcatca tttaaaatca cgacatggct
    14341 tcctgggata tcttttgtat ggaaccataa atgcgatttt tgcgcacgtt tattcgttaa
    14401 ataatcattt tgcttattat ttttaccgac taaaatcgta tcgccatcag tcgaaacgta
    14461 ggattgtaac tggatttttt gttgcttttt ctttttctgc tgtttctttt gtttgataaa
    14521 gccttgttct gctagttctt cacgaatatc gtcaatttca tgaacttgaa tgtgtgacaa
    14581 ctgttgctcg atattttcaa aataagcgat attttcttcc gttaaagtaa tttgatgggt
    14641 taattcgcgc tcacgtgttt tcattcggtt gtattgcttg taatagtatt gcgcattttc
    14701 agcaggtgac ttttgtggat ttaacggaat agtcacgttt tctcctgtat aataattcat
    14761 tgtctctaac tggcgatctc caggtttgag ttgataaata ttcgctgtga ttaactcgcc
    14821 gtacaattgt tgattttctt tttcttcagt cccggcttgt tcatcgacga gcttacttaa
    14881 tttattttga tatttttgaa gcaattgttg gacgagtttg actaaatcgt ttgcacgttg
    14941 tttgacgcgt tcacgttcac cgcgtgcatc ataaaaacgg tcgagcagtt catggagtga
    15001 atcatatgtg acgcaatcat cgtaaaactg atgtaacttc ataaaataaa agtcttcttt
    15061 acctgtttcg ttatttttat gaaataccgg ctggggtgtc gctttcgttt cggccatcac
    15121 ttcgtcaaaa gcttcaggta aagtttgtgt ggtcatataa tggcgtcttg atgtgatttc
    15181 ttttgtgatt aacggtgaaa aaccttcaaa catttgaagc agttggcgat caattttgcc
    15241 cgcattgaaa tcaatatgtt ggagcacttg cgtaccagta tatgcataag ggttctgttt
    15301 atgttgtgtt ggcggcactt catattgaaa acctggcatc acggttctaa attgattcgt
    15361 atttggtgta aggtgtttaa aaccttctaa aattttacgt tcttcattaa cgagaatgag
    15421 attactatgt ttgcccataa tttctaaaat cactgtacga tgaatcgtgt caccaatttc
    15481 atctttactt tccacgtcca tttcgatgcg acggtcattt ccgatttggc gaatggcaag
    15541 gatacgtcca ccttctaaat gtttacgaaa gacgcgcgca aacatcggcg gttcaaatgg
    15601 attatcatat ttttttgtag tgaggtgaat ccgtgcaaaa ttcgggtgaa tcgacaacaa
    15661 caagtgatga ttttggcgtt gctgtcttat aaccatgatg attgtatcgt tttccggttg
    15721 attgatttta tgaatacgcc cagaaacgag aaattgtaaa tcttctacca tttttcttgt
    15781 aaacatacca tcaaatgcca taattatctg ccacctttaa aaattttcat tacattatta
    15841 taacatgcct atccatgcac gtcagaacta aagttttcgc ttggccctct atgcaattca
    15901 ataaaaattg tggtaagata tgttaataaa tagaagaata gcgaagaaag gtcgtaaggc
    15961 atggatactg aaaaaggctt actaatagta ctctcaggcc cttctggtgt tggcaagggc
    16021 acagttagaa aacgtatttt tgatgatcca cacacatctt ataaatattc tatctcgatg
    16081 acaacgcgtc aaatgcgaga aggtgaacaa gatggcgttg attatttttt caaaacgaga
    16141 gaagaatttg aaaaactcat tgaagcagat gagtttattg aatacgcaga gtatgtagga
    16201 aattattacg gcacacccgt gcaatatgtt aaagatacga tgaatgcagg tcatgatgta
    16261 tttttagaga ttgaagttga aggggccaag caagtgcgca agaaatttcc agatgcgcta
    16321 tttatctttt tagcaccacc aagtctagac catttaacag agcgtttaat cggtcgtgga
    16381 acagaatcaa aagaaaaaat tgaaagtcgc gtaaaagaag cgaaaaaaga agttgagatg
    16441 atgaatcttt acgattatgt tgtcgtaaac gatgaagtgg atctagcgaa agaccgcatt
    16501 cagtccattg ttgaagctga acatttaaag cgagaacgca ttgaagcgaa atacagaaaa
    16561 atgttattgg aggccaaaaa ataatgttat acccaccgtt acaccactta caagataaaa
    16621 ttaactcaaa atatttaatt gcgacaacag ccgctaaacg tgcacgtgag ttacaagctg
    16681 accctgatca tttattatta gatcgttatg aaagcaaaaa aacagtaggc cgtgcgttag
    16741 aagaaatcgc cgcaagcaaa attcatccac acgttgatga atcacacttt taattcaata
    16801 caatcgataa atgcatatga catttaaaat acgcttttca aagttgtctc tatccgttga
    16861 gatgaatttg aaaggcgttt tttacattga ttgtatattt tggttcttta tcaaacgtcg
    16921 gtgaatgaga cgataaaatg acatagtcta tatctattat tagtagttt
//
LOCUS       DANHPA010000059        16207 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.059, whole genome shotgun sequence.
ACCESSION   DANHPA010000059 DANHPA010000000
VERSION     DANHPA010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 16207)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16207)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16207
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.059"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(66..1514)
                     /locus_tag="PTC28_001492"
     CDS             complement(66..1514)
                     /locus_tag="PTC28_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter"
                     /protein_id="HDK5716776.1"
                     /translation="MENKSYSKIIMTVFLIGAFFMILNETLLNIALQELMHYFDISRT
                     TVQWMASGFMMVMGIVSPLSALIIQWFTTRRLFLGLLVIFTTGSFVAGFAVNFPMLLT
                     GRMIQAMGTGLMIPLIMNAMLLLFDESVRGRVMGTFGLIIMFAPALGPTLSGVIVDYL
                     GWRWLFFSVIPFMLFTFVFAFIFLKNVGEVTRPKIDVLSIILSTVGITGLIFSVSKVS
                     SVAGGLLNWQIAVPLVIGLISIIAFIRRQFILEEPILDFRVLHYHNFRKGMIIFVIVM
                     MSMFASEIVMPMYLQGPMGFSAKVAGLILLPGALLNGLLSPFMGGLFDKFGPRKMVIP
                     GLFLLLVVAIFYTTIHPGIPVYAFVIAYIVLMVGIASIMMPASTNGLNALPQDKYPHG
                     TAIFNVLQPIAGATGIAVFVGIVSGVQNNEISKHEHVTQDIVNKAMTMGMHSAYIFAI
                     VLIVIGIFFAFRLTNASKEKKLQEAVSQSTEQ"
     gene            complement(1799..2296)
                     /locus_tag="PTC28_001493"
     CDS             complement(1799..2296)
                     /locus_tag="PTC28_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002490528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716777.1"
                     /translation="MQDLIKRHVLNGEFDAVKNLMSATDFLEFEEAYISSAYENESVM
                     YYTCLLYMIKEAETTEIHDLAFLLLVYPLSDVPGAIEAAYYHAESSIDLTKGKEVKSL
                     LQMLLLHALPEPVISDKKAFEVSKQILKLDPSNKVARNVLKDTAKRMDQVVVDFDQLS
                     HYKDA"
     gene            complement(2463..3479)
                     /locus_tag="PTC28_001494"
     CDS             complement(2463..3479)
                     /locus_tag="PTC28_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDK5716778.1"
                     /translation="MIHPGLKRKQQLTFISTLILLMLAIVWNLTTGEYAMSYGQIIQT
                     FLGQGDAADRLILIDFRLPRVVITLLAGIALSMSGAVLQSVTKNPLAEPGILGINAGS
                     GFAIALFVSLGQIHADQFVYVIPIVSMLGGLGTALAIFILSYQGDKGLSPASMVLIGV
                     GMATALSGAALTIMATFNKEQSEFIATWLAGNIWGDTWSFVFAFLPWLIVLVPFLFIK
                     SETLNILNTNDTVSKALGIRLNKERFILVLVAVTLSSVAVAVAGAIGFIGLMGPHIAK
                     SIVGPRHQLFLPIAIIIGALLLVVADTLGKILLQPSGLPTGLIVAVIGAPYFLYLMYR
                     TRSV"
     gene            complement(3476..4480)
                     /locus_tag="PTC28_001495"
     CDS             complement(3476..4480)
                     /locus_tag="PTC28_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDK5716779.1"
                     /translation="MLKKRVNMKWSDAVQFICAVIVLCIVFIIATLLGEAHVNLSTIF
                     EAIFHYNPKIQAHNVISEVRIPRNIGAVLVGMALATAGAVIQGVSKNGLADPGLIGLN
                     AGAAFALALTFALFPGASFIAHIIAGFIGAMLGGAIVMTIGASRRDGFNPMRLILAGA
                     AVSALLTALSQGVALIFRLNQAINFWSAGGVSGTNWQQIQISVPIILVTLILLILMGR
                     QLTILSLGDALAVGLGQNIKMVRTVALILSMLLAGVSVAMVGQVAFVGLIVPHIVRSW
                     VGTDYMKVLPMTAVVGGTLVLGSDLVARLLGEAPMSAVISFIGVPYFFYLIRKGGRTL
                     "
     gene            complement(4506..5309)
                     /locus_tag="PTC28_001496"
     CDS             complement(4506..5309)
                     /locus_tag="PTC28_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5716780.1"
                     /translation="MSRLTGKEVTIGYGDRVIVDNLDVAIPDGAITSIIGPNGCGKST
                     LLKALSRLLNTKSGEIYLDGKNIHVQSTKEIAKKIAILPQSPDVADGLTAGELVSYGR
                     FPHQKGFGRLNEEDKKAIDWAMRVTGTIDFKHRAVNDLSGGQRQRVWIAMALAQKTDI
                     IFLDEPTTYLDISHQLEILELVQELNAEHGTTIIMVLHDINQAIRFSDHLIAMKDGAI
                     IKQGDTHEVLTNEILERVFNIDAELSTDPRTGKPMLVTYNLLCKHYEKA"
     gene            complement(5676..6509)
                     /locus_tag="PTC28_001497"
     CDS             complement(5676..6509)
                     /locus_tag="PTC28_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HDK5716781.1"
                     /translation="MSRTIRDLLLVIVGAFIFSAGVNAFVIAGDLGEGGVTGLAIVLY
                     YAFHWSPAVINFVVNAVLIAIGYKFLSKRSMYLTIVATILISVFLSLTHTWQVKSDDV
                     IINAVFGGFSVGLGIGIIVLAGGTTAGTTILARIANKYLDVSTPYALLFFDLIVVLIS
                     LTVIPLDRALFTVVSLYIGTKVMDFVIEGLNPKKAVTIISKEPDRIAKMIDEDIGRGV
                     TILNGRGYFSKQETDVLYAVISKTQLSRTKRLIRKIDHSAFVVVHDVRDVYGNGFLVE
                     D"
     gene            complement(6983..8209)
                     /locus_tag="PTC28_001498"
     CDS             complement(6983..8209)
                     /locus_tag="PTC28_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HDK5716782.1"
                     /translation="MYLIINIIGLFVFLGVAFLFSRDRKNIQWASIATLVVLNLILAW
                     FFVYFPAGTLFVKKAAEGISWVIDAAFTGIGFAFHSFTAPKQLDMAVAALFPILLVVP
                     LFDILMYLRILPWIMRGIGWVLAKITRQPKFEAFFGIEMMFLGNTEALAVSSEQLKRM
                     KETRVLTLAMMSMSSVSGAIVGAYVTMIPGELVLTAIPLNIVNAMIVASILNPVKVEV
                     DEDVIYDLRANEARQPFFSFLGDSVLNAGKLVLIIIAFVISFVALAELADRLIHLVTG
                     GIGHLFNAKGSFGLDQILGVFMYPFALLLGLPLDEAWLVAQNMAKKIVTNEFVVMGQI
                     AGEVNDYAPHRRAVISTFLISFANFSTIGMIIGTLKGIVNEKTSDFVSKYVPMMLLAG
                     ILVSLLTAGFVGLFAW"
     gene            8486..8722
                     /locus_tag="PTC28_001499"
     CDS             8486..8722
                     /locus_tag="PTC28_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein A"
                     /protein_id="HDK5716783.1"
                     /translation="MLHIGNAEIGKQYRVKALDTDNVHLKHRLRALGCVEGCQISVHQ
                     KGLFKGPCTLKVNGQHICIRNCDACEIRLEYAYE"
     gene            8715..10709
                     /gene="feoB"
                     /locus_tag="PTC28_001500"
     CDS             8715..10709
                     /gene="feoB"
                     /locus_tag="PTC28_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HDK5716784.1"
                     /translation="MSNAYCILGNPNVGKTSLFNALTGSYEYVGNWSGVTVDKKVGQL
                     KKNSGHLIDLPGIYDLVPISRDETVVTDYLLHEKFDGMINIIDAAQIKRNFNLTVQLL
                     EYGAPLLIGLNMIDVANKRGIRIDYQRLMRQLHIPIIPVIARTGKGSDEVLNALTDRH
                     VSRQRPLKIHYGDDVENLLTQLVKALPTTLSLAQRHYRFLTIQYLLNNPAVLRYLDEE
                     TLQQFETLTAQFKQFNTLDLEQHILTCRQQYIDIMLAEIVTYPEAERQHLTERIDALL
                     THKILGIPIFLGMMWLIFQLTFTWIGTPLSDQLDAFFGGPLTDQTVNIMDKLGIYPAL
                     QDLVTDGIIAGVGGVLVFIPQILVLFFFISLLEDSGYMARIAVIMDRLMEKFGLNGKS
                     FIPMIIGFGCNVPGIMAARSIEEEKERLTTILIAPFMSCSARLPVYGLFVAIFFAQHQ
                     ALVVLSLYVLGIVVALLVSWLLSKTVLKKDTSIFVIELPPYRLPSIKTLWRSTWEKGK
                     GFVKKAGTFIFAGSIVIWSLNYTGPSGMDVPIDQSFLHMIGAAIAPLITPLGFSSWQT
                     AATLIPGFLAKEVIISSMAIIFAVSEESLVATVSTHFTALSAYSFMVFILLYTPCLAT
                     VAAIRKETPSWKWTMLAVTYPFVIAYVLSLLVYQIGSHFI"
     gene            10722..10880
                     /locus_tag="PTC28_001501"
     CDS             10722..10880
                     /locus_tag="PTC28_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FeoB-associated Cys-rich membrane protein"
                     /protein_id="HDK5716785.1"
                     /translation="MTLFINLLLIALILGYATWVMLSFFKKSKQGKCSACESSKGCPT
                     ESLPKHLQ"
     gene            complement(11038..12792)
                     /locus_tag="PTC28_001502"
     CDS             complement(11038..12792)
                     /locus_tag="PTC28_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5716786.1"
                     /translation="MKARNPLVFLLKKISWPVGLIIVAVTIASIGSLTGLLVPLFTGQ
                     VVDKFTFESISPVFIIALVAVFLVNAVLSGFGYYLLNKIGEKIIYAIRSVLWEHIIHL
                     KMPFFDKNESGQLMSRLTDDTKVINDFISQKLPGFFPAVITLIGSLIMLFVLDWQMTL
                     LTFITIPIFILVIVPLGKIMQKISTNTQTEIANFSGLLGRVLTEMRLVKVANTEKLEL
                     DKAHSNLKTIYNLGLKQAKIAAVVQPISGIIMLITIGIILGFGGMRIASGAISAGTLV
                     AMIFYVLNLSIPLINISTLVTDYKKAVGASQRIYEILHEPLENIAAPNLQDEIPTGDL
                     KFDHVYFGYDDTPVLKDVSFNVLRGEVTAFVGPSGSGKSTLFSLIERMYEIDQGGIYY
                     DGTSIDALSLTDWRRKIGYVMQSNAMMNGTIRDNILYGVDREVPEEELIHYAKLANCH
                     EFIMEFEQGYDTIVGERGLKLSGGQRQRIDIARSFVKNPDILLLDEATANLDSESERK
                     IQEALDILMENRTTIVIAHRLSTIKKAGQIIFLDHGEVTGKGRHEELMQTHAMYQQFV
                     ETQNLTQHRAVTEQTETE"
     gene            13067..14344
                     /gene="pbp4"
                     /locus_tag="PTC28_001503"
     CDS             13067..14344
                     /gene="pbp4"
                     /locus_tag="PTC28_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein PBP4"
                     /protein_id="HDK5716787.1"
                     /translation="MKKIILSIVVVFFASTIITPFARAYTPTPVELAQQSGYPVTWAY
                     QPEGMINISQTGQILYEFQSEQQWYPASMTKLMTMYLTLQAVKEKKLSLNDTVQITDQ
                     HYRMSTLPELSNTKLYPGETYTVAELLQITVSASSNAAALILANQVSDSTSDFVDKMN
                     DTAKSLGMTHTHYVNPTGAENRLLLEFAPKKYQHESSSTSSARDYAILAQHVVKDTPK
                     ILYFTKQIAPTQHGVTYYTFNDLLEGGNMSLPGTDGLKTGSSDIADYNNSLTTKRGKF
                     RIFHIIMGAGDYKHLGGEKQRNMMSASAINYTFSQYDYKKILSKGKHKINGKSYYVTE
                     DLYDVVPKDMSKPYHLVVKDSQVHLDYPRKFITKNDGPPTVKVENPLIYESKSVVVSS
                     WHAFPILTSLAFLVIVLILAFILRRLLKLLFRK"
     gene            complement(14601..14900)
                     /locus_tag="PTC28_001504"
     CDS             complement(14601..14900)
                     /locus_tag="PTC28_001504"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716788.1"
                     /translation="MLNNKTILSKRYNQTIINAYLLESEWFNEKFSVEDIQTVFNWKN
                     FIKDIKTEVYVIQDDNDSILDYRDTLEAVKYAKENHLPWKFFTEVNGDHVPLSNE"
     gene            complement(15006..>16207)
                     /locus_tag="PTC28_001505"
     CDS             complement(15006..>16207)
                     /locus_tag="PTC28_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5716789.1"
                     /translation="KLLNTLKNFPSAQKFLWFSLFFYFSMYLSKTIHALWFEENHALT
                     SFGFSYTMMAVAGILSFFTGKLGDKISPHFALRLGVIVYAVGLALRVFTFSFWIAGLS
                     GFIAGLGASLVIISMRFWIVSLGTEEDRPALVSISEMGNHTGIMIGTSLSGILVWLFS
                     YLVESPMAYVLILAALCCCLTIFLVPKFSKKVTETEGNQTHSKKSLKEYKLMMIGIVA
                     LGMIAGVSVSLISPFIPVILKHQGISVSLIGLFMAMISLTAIFAAPIYASKNVSRYKQ
                     WLFFISELVAGLLLLMFLTSLPSLIILLILVFRAFLYTGSAIAQELIELELFPKPHLG
                     FFFGLSQSSFFIGDALGGTFGGYLYNMSITIALVICTSLLIFNAFLLPLFFTAMKRHY
                     KEGGSVH"
BASE COUNT         5272 a         3431 c         2695 g         4809 t
ORIGIN      
        1 tgcccataca taagaaaaag agactaagaa atcttcattt cctagccctt aaaaagacga
       61 tatcatcatt gttctgttga ttgtgaaaca gcttcttgta atttcttttc tttagaagcg
      121 tttgttaatc taaacgcgaa gaaaatacct attacaatca atacaattgc gaaaatataa
      181 gcactgtgca tccccatcgt catcgctttg ttaacaatat cttgtgtcac atgttcgtgt
      241 tttgagattt cgttattttg tacaccagaa acgataccta caaacactgc aatacctgtt
      301 gcccctgcaa tcggttgtag gacgttaaaa atcgctgtgc cgtgtggata cttatcttgc
      361 ggtaaagcat ttaaaccatt cgtacttgct ggcatcataa tagaagcaat gccgaccatg
      421 agtacaatat aagcaattac aaaggcataa actggaatac ctggatgaat ggttgtgtag
      481 aatatcgcta ctaccaaaag taaaaataaa ccaggaataa ccattttacg tggtccaaat
      541 ttgtcaaaca atcctcccat aaatggtgag agtaatccat tcaacaaagc acctggtaat
      601 aaaataaggc ctgcaacttt agcagagaaa cccataggtc cttgtaaata cattggcatc
      661 acaatttcag atgcaaacat actcatcatc acaatcacaa aaataatcat ccctttacgg
      721 aaattgtgat agtgcaacac gcgaaaatct aaaataggtt cctctaaaat aaactgtcga
      781 cggataaaag cgataatact gatgagtcca ataacgagtg gtacggcgat ttgccaattc
      841 aataagccgc cagctaccga actcacttta gacacactga aaatcaaccc tgtaatgccg
      901 accgttgaaa gaataattga cagtacatcg attttaggtc gtgtgacttc tcccacattt
      961 tttaagaaaa taaatgcaaa tacaaatgta aataacataa acggaatgac gctaaaaaac
     1021 aaccaacgcc accctaaata gtcaacaata acacctgata aagtcggccc gagtgcaggt
     1081 gcgaacatga taatcagtcc aaatgtcccc atgacacgcc ctctcactga ctcatcaaat
     1141 aaaagtagca tcgcattcat aataagcgga atcatcaagc cagtccccat tgcttgaatc
     1201 attcgtcctg ttaataacat cggaaaattc acagcaaaac ctgctacgaa tgaacctgtt
     1261 gtaaaaatga cgagtagccc taaaaataat cgtcttgtcg taaaccattg gataattaac
     1321 gcagatagtg gtgaaacaat tcccatgacc atcataaaac cactagccat ccactgcacg
     1381 gtcgttctcg aaatatcaaa gtaatgcatc agctcttgta atgcaatatt caatagtgtt
     1441 tcatttaaaa tcatgaaaaa agcaccaata agaaataccg tcataataat ttttgaataa
     1501 cttttgttct ccataattta actccctctt ttttcgaact tgtttattat acacaaatcg
     1561 acaataaata gatacatata caactttctt ttcaatttca ttaaaatatc agcattatat
     1621 ttaaaattgc acaacttata ttcccgtatt gcgcagttct caaaaccact tcactcatgt
     1681 atccctattt tttgaacaag cagagcaata ggtgcgcaga atctgtcccc ttttgtttta
     1741 cctcaatgca aaaaaccatc caattcttga atcacatcga atggttatta ttcaaaaatt
     1801 atgcatcttt ataatgactt aactggtcaa agtcaacaac gacttgatcc atacgtttag
     1861 ctgtatcttt caatacatta cgcgcgactt tattgctcgg atcaagtttt aaaatttgtt
     1921 tcgaaacttc gaaagctttt ttatcagaaa tcacaggttc cggaagtgca tgtaacaata
     1981 acatttgtaa caagctcttc acctctttac ccttcgtcaa atcaatagaa gattcggcat
     2041 gataatacgc ggcctcgatt gcacctggaa cgtcacttaa agggtatacg agtaatagaa
     2101 aagctaagtc gtggatttca gttgtttctg cttctttaat catgtacaac aaacacgtgt
     2161 agtacatgac actttcattt tcatatgcac tggaaatata ggcttcttca aattctaaaa
     2221 aatcagtggc agacattaaa tttttcactg catcaaattc gccgtttaag acatgtctct
     2281 ttattaaatc ttgcatggct cgtcctcctg aatgtgccat agtccaatca ctttcatctt
     2341 aacatacttg ctaaaagaat acagattggc gaatcacatt aagtccaatt ttatcaaatt
     2401 ttttaataca atgaacattt taacatattt tatagaaata tacttcaatc ttgaggctga
     2461 aattatacag aacgtgtgcg atacatcaaa tataagaaat atggcgcacc aatcacagca
     2521 acgattaacc cggtaggtaa gccactcggt tgtaagagta tttttccaag cgtatctgca
     2581 acaacgagta ataatgcccc tatgataatg gctatcggta agaaaagctg atgtctcgga
     2641 ccgacgatag atttcgcgat gtgcgggccc attaaaccga tgaaacctat tgcaccggca
     2701 acagcgactg caacacttga aagcgtcacg gctactaaaa ctaaaatgaa gcgttcttta
     2761 ttgagtcgaa tgcccaatgc tttagacact gtatcgttcg tatttaaaat gttaagtgtt
     2821 tcagacttga tgaataaaaa tggcactaaa acgatgagcc atggtaaaaa ggcaaacaca
     2881 aacgaccatg tatcgcccca tatatttccg gctagccaag ttgcaataaa ttcagattgc
     2941 tccttattaa aggtcgccat aatcgtgagc gccgcaccag ataatgcagt ggccattccg
     3001 acaccgatca gcaccatact tgccggagaa agccctttat cgccttggta gcttaatata
     3061 aaaatggcga gtgctgttcc taagcccccc aacatactga cgataggtat aacatagaca
     3121 aattgatcag cgtgtatttg acctaaagag acgaataacg cgatagcaaa accacttcct
     3181 gcattgatgc ctaaaattcc gggttctgcg agaggatttt tagtaacact ttgtaataca
     3241 gcaccactca tacttaaagc aatacccgct aacaacgtaa tgacaacacg tggcaaacga
     3301 aagtcaatta atataagtcg atctgccgca tcaccttgtc ctagaaatgt ttgaataatt
     3361 tgaccgtacg acattgcata ttcacccgtc gttaaattcc atacgattgc gagcattaaa
     3421 agtatgagtg tactaatgaa tgtcaactgc tgctttcgtt ttaaacccgg atgaatcata
     3481 gtgtacgtcc tcctttacga atcaaataga aaaagtaagg gacaccgata aaggagataa
     3541 cggcgctcat tggcgcttca cctaacagtc tcgccacgag atccgaacct aaaacgagcg
     3601 taccacctac tactgcagtc attggaagga ctttcatgta atccgtaccg acccaagaac
     3661 gtacgatatg cgggacgatg agaccgacaa atgcaacctg accgaccatc gctacagaaa
     3721 ctcctgccag tagcatcgat aaaattaaag cgactgtgcg gaccatcttt atattttgac
     3781 cgagtcctac agctaacgca tcgcccaaac tcaaaatcgt caactgtcga cccatcaata
     3841 tcaataagat taaagtcact aaaataatcg gcacactgat ttgaatttgc tgccaatttg
     3901 tgcctgacac accacctgcg ctccaaaagt taatggcttg attgagacga aaaatgagcg
     3961 ccacaccttg actgagtgcc gttaacagcg cactgacagc agcaccagct aaaatcagac
     4021 gcattgggtt aaaaccatct cgtctcgacg caccaatcgt catcacaatc gcgccaccta
     4081 gcatcgcccc gataaaacca gcaataatat gcgcaataaa tgacgcccct ggaaacagtg
     4141 cgaaagtgag cgctaaagca aaagcagccc cagcatttaa accaattaag ccggggtctg
     4201 caagtccatt tttagagaca ccttgaataa cggcacccgc tgttgcaagt gccatcccta
     4261 caagcacagc accgatattt cgagggattc gaacttctga aatcacattg tgtgcttgga
     4321 ttttcggatt ataatgaaaa atcgcttcaa aaatggtact taaattcaca tgcgcttcac
     4381 ctaataaagt cgcaataata aatacaatac atagtacgat aacggcacag ataaattgta
     4441 ccgcatcact ccacttcatg ttcactcttt ttttcaacat gttctatact ccgttaattc
     4501 aacctttaag ctttttcata atgtttacac aacaggttgt aggtcacgag catcggttta
     4561 cctgtacgtg gatctgtact taactctgca tcaatattaa atacgcgttc taaaatttca
     4621 ttcgtcagta cttcatgcgt atcaccttgt ttaataatag cgccatcttt cattgcgata
     4681 aggtgatctg aaaaacgaat tgcttgatta atatcgtgta ataccataat aattgtcgtg
     4741 ccatgttcag cattcagttc ttgtacaagt tctaaaattt caagttggtg tgaaatatct
     4801 aaatacgttg ttggttcatc aagaaaaata atgtctgtct tttgtgcgag cgccatcgca
     4861 atccaaacac gttggcgttg cccaccactt aaatcattga ctgcacgatg cttaaaatct
     4921 atcgttcctg tcacacgcat cgcccaatca atcgcttttt tatcttcttc attcaagcga
     4981 ccaaagccct tttgatgtgg gaagcgacca taagaaacaa gctctccagc cgttaaacca
     5041 tccgccacat ctggagactg aggtaaaatc gctatttttt tagctatttc ttttgttgac
     5101 tggacatgaa tatttttgcc gtctaaataa atttcaccac tttttgtatt taataatcga
     5161 gaaagtgctt ttaataatgt tgatttgcca cagccatttg gcccaataat tgacgtaatg
     5221 gcaccatctg gaattgcgac atctaaatta tcaacaatga cacggtcacc atacccaatt
     5281 gtgacctctt tacctgttaa tctactcatc gtcatccttc tttcttaaaa cgattacgcc
     5341 ctgggacact atccatcacg tgattaaggc gttactgttc acactcacca cgaatcgtga
     5401 gcttttcatt ccctaatatt gcgaaatcta tatacatttt atgcaattga taatcattat
     5461 catgtttatg ccaagtatat catcatttat caaaaatttc taactcaaaa taatctcaat
     5521 taaacttcat ccatatcctt atgtatacgc atgtatctaa aaattttgat tcactcgtag
     5581 tcaaaaataa tttcaaactt cttttctgcc cagattacac ataaaaaaga agctgagaca
     5641 tcatgatatg atatgctcaa cccttctttt tacttttaat cttctactaa aaatccatta
     5701 ccatagacgt cacgcacgtc atgcacgact acaaacgcac tatggtcaat tttacgaatt
     5761 aaccgcttcg tccgtgacaa ttgcgtttta ctaattacgg cataaagcac atccgtttct
     5821 tgtttggaga aataaccacg cccatttaaa atcgtcacac ctctaccgat atcttcatca
     5881 atcattttag cgatgcggtc aggttctttt gaaataatcg tcactgcctt tttaggattt
     5941 aaaccttcaa taacaaaatc catcactttt gtgccgatat ataaactgac cacggtgaac
     6001 agtgcgcgat ctaatggaat cactgtcaat gaaatcaaca cgacaattaa atcaaaaaag
     6061 agcaatgcat aaggtgtact gacatctaaa tacttattcg ctatacgtgc caaaatggtc
     6121 gttccagctg tcgtaccacc ggctaaaacg ataataccaa tacctaaacc gactgaaaac
     6181 ccaccgaaca cagcattaat aatgacatca tctgatttga cttgccaagt atgtgttaaa
     6241 cttaaaaata cagaaattaa tattgtagcg acaatcgtta aatacatact tcttttactt
     6301 aaaaatttgt aaccaatcgc aatcaatacc gcattaacga caaagttaat gacggcaggc
     6361 gaccaatgaa acgcataata aagtacgata gcgagacctg tcacgccacc ttccccgaga
     6421 tcaccggcga tgacaaatgc attgaccccc gctgaaaaaa taaatgcgcc tacgataact
     6481 agtaacaaat ctcttatagt tctgctcacc caatgattcc tcccattctt ttatatcatt
     6541 tctaactcgt cataagccat actatcacaa ctttgtaaca aagcgaaacc cttgactgac
     6601 aactcatttc aacaggcgca aaataaaatt ttaaatttct gaatatttcg tttacttttg
     6661 gcgagaatat gtgtataata gaaactacct tatttgttgc tagtcatcta gtcaacaaga
     6721 ggccatctcc tttgtgtttt taatagtaca agagattttt tgctcgagat tgatatcatg
     6781 ctcgaatatc aatcaaaatt attcatttcc cgtctaaggc agttcagcat cagctgggct
     6841 gctctatttt tattcacaca tctcctaacg catgtcattg aaagtgtctt gccaacataa
     6901 gaaagaggct cagacatcat tgagtccaaa cccctagttc ctatattcaa aagcgttgtg
     6961 attcattcac aagcggttga tcttaccacg cgaataaacc tacgaaacca gctgttaata
     7021 acgatactaa aatacctgct aataacatca ttggtacata tttagataca aagtcagatg
     7081 ttttttcatt cacaatacct tttaacgtac cgataatcat accgattgtt gagaagtttg
     7141 caaatgagat taagaatgtt gaaatgactg cacgacggtg aggtgcgtaa tcattcactt
     7201 ctcctgcgat ttgacccata acaacaaatt cattcgttac aattttcttc gccatatttt
     7261 gtgcaactaa ccatgcctca tctaatggta aaccaagtaa taatgcgaat ggatacatga
     7321 atacacctaa aatttggtca agaccgaagc taccttttgc attgaataag tgaccaatgc
     7381 caccagtaac taagtgaatt aaacggtctg ctaattctgc taatgcgacg aaactgataa
     7441 cgaaagcgat aatgattaat actaatttac cagcatttag cacagagtca ccaaggaatg
     7501 agaagaatgg ttgacgtgct tcatttgcgc gtaaatcgta aatcacatct tcgtctactt
     7561 caactttcac agggtttaaa atagaagcaa cgatcatcgc gttgacaatg tttaacggga
     7621 tcgctgtcaa tactaattca cctggaatca ttgtcacata agcaccaaca atcgcaccag
     7681 aaaccgaact catcgacatc atggctaatg tcagcacacg tgtttctttc atacgtttta
     7741 attgttcgct tgaaaccgca agtgcttcag tgtttcctaa gaacatcatt tcaataccga
     7801 agaatgcctc gaatttaggt tgacgtgtaa ttttagcaag tacccaacca attccgcgca
     7861 taatccatgg caaaatacgt aaatacatca agatatcaaa aagtggcaca actaataaaa
     7921 tcgggaatag cgccgctact gccatgtcca attgttttgg cgctgtgaag ctatggaatg
     7981 caaagccaat ccccgtaaac gctgcatcaa taacccaaga aatcccttca gcagcctttt
     8041 taacaaataa agtacccgct gggaaataca caaaaaacca tgccaaaatc aagttaagga
     8101 caacaagtgt cgcaatagaa gcccattgaa tgtttttacg gtcacgtgag aataaaaatg
     8161 caacccctaa aaagacaaac aacccaataa tgttaataat caaatacata aggagatacc
     8221 ttttaccttt caactgtttt ttaacaacat tagtatacca cgacgtttac atactgagaa
     8281 tatatttttt cagtctcatt taagttcaat tcatctcaac acgatgcgca tgagtccgtt
     8341 ttttaatttg tcactttaaa atatttagat tgaaattcga tattttttca catttgatat
     8401 caaaaagtta ttgcttacaa atgaaaacag gattattcta tagttaagtg aaaatgatta
     8461 tcattaacga taagtaggtg tgcgtatgtt acatattgga aatgctgaga tcggaaaaca
     8521 atatcgtgtc aaagctttag atacagacaa tgtccattta aaacatcgtc tacgagctct
     8581 aggttgtgta gaaggatgtc aaatttctgt ccatcaaaaa ggattattca aaggaccttg
     8641 tacattaaaa gtgaacggcc aacatatttg tattcgtaac tgtgatgctt gcgagattag
     8701 attggagtat gcttatgagt aatgcatatt gtattttagg gaatccgaac gtaggaaaaa
     8761 cgtccctttt caacgcttta accggttcat atgaatacgt cggaaactgg agcggtgtca
     8821 cagtagacaa aaaggtcggt caacttaaga aaaattctgg tcatttaatc gacttaccag
     8881 gaatttacga cttagttccc atttcccgtg atgaaactgt cgtaaccgat tatttactac
     8941 atgaaaaatt cgacggcatg atcaatatta tcgatgcagc tcaaattaaa cgcaatttta
     9001 atttaactgt acaattgtta gagtatggcg cgccattgct catcggtctg aacatgattg
     9061 acgtggctaa taagcgcgga attcggattg attatcaacg tttaatgcgt caattgcata
     9121 ttccgattat tcctgttatt gcacgtaccg gtaaagggag cgatgaagtg ctcaatgctc
     9181 ttactgaccg tcatgtttca agacaacgac ctttaaaaat ccattatggt gatgacgttg
     9241 aaaatttatt aacacaactt gtcaaagcat tacctaccac actttcatta gcacagcgcc
     9301 attaccgttt tttaaccatt caatatttac ttaataatcc agctgtattg cgatatttag
     9361 atgaagaaac gctacaacag tttgagacat tgacggcaca gtttaaacag ttcaatacgc
     9421 tcgaccttga acaacatatt ttgacatgtc ggcaacagta tattgacatc atgcttgctg
     9481 aaattgtgac ttatcctgag gcagagcgcc aacatttgac tgaacgaatc gatgcgttgc
     9541 tcacacataa aatactgggt atccctatct ttttaggaat gatgtggctc atctttcaac
     9601 tgacgtttac ttggattggg acaccgcttt ctgaccagtt ggatgcattt ttcggaggtc
     9661 ctttaaccga tcaaacggtc aatattatgg ataagctcgg tatttatccc gcccttcaag
     9721 acttggtgac agacggtatt attgcgggtg ttggcggtgt actcgtgttc attccacaaa
     9781 ttttagtgct gttctttttc atttcattat tagaagattc aggttatatg gcgcgtattg
     9841 cagtgattat ggaccggttg atggaaaaat tcggccttaa cggcaagtca tttattccga
     9901 tgataatcgg ttttggttgt aacgtaccag gtattatggc ggcgcgcagt atcgaagaag
     9961 aaaaagaacg gctgacgacc attttaattg caccgttcat gtcatgttct gcgcgacttc
    10021 ctgtatatgg gttgttcgta gcgattttct tcgcacaaca tcaagcactt gtcgtgttaa
    10081 gtctatacgt gttaggtatt gtcgtcgcgt tactcgtaag ctggttacta tctaaaacgg
    10141 tgctaaaaaa agatacatct atttttgtca tagagttacc accatatcga ttaccttcaa
    10201 ttaaaacatt atggcgtagt acttgggaaa aaggaaaagg gttcgttaaa aaagcaggta
    10261 catttatttt tgcaggctct attgtgattt ggtcactcaa ttacacgggc ccatctggta
    10321 tggatgtccc tatcgaccaa agtttcttac acatgattgg tgcggctatt gcgccactga
    10381 ttacaccact tgggttcagt tcatggcaaa ccgctgcgac actcattcct ggatttttag
    10441 cgaaagaagt tatcattagt tccatggcca ttatttttgc ggtcagtgaa gagagtctcg
    10501 tcgctactgt atcaacacat ttcacagcac tctctgccta ttcattcatg gtttttattt
    10561 tactttacac cccatgttta gcgacagtgg ctgcgatacg caaagaaacc ccttcatgga
    10621 aatggacgat gcttgctgtg acatacccct ttgtcattgc atacgtgttg tcattgctag
    10681 tctatcaaat cggttcgcac tttatatagg aggcgttgaa attgacgtta ttcattaatt
    10741 tattattgat tgcattgata ttaggttatg caacttgggt aatgcttagt tttttcaaaa
    10801 agtcgaagca aggaaaatgt agtgcatgtg aaagtagtaa gggttgtccg actgaaagtt
    10861 taccgaaaca tttgcagtga caggcccaac ccacatcttc gtttctgttg ctcacctact
    10921 ttttgagtga gaataagtaa gcgaagatac aaatgattga ctatacaata aagaagactg
    10981 ggttgaaaac gcactgcttc aagtggtttc agatacccag tctttttgtt ttcgttatca
    11041 ttctgtttca gtttgttctg ttactgctcg atgctgtgtt aaattttggg tttcaacaaa
    11101 ttgctgatac atggcgtgtg tttgcattaa ttcttcatga cgtcctttgc ctgtcacttc
    11161 gccatggtct aagaaaataa tctgacccgc ttttttaatt gtagagagac ggtgtgcaat
    11221 aacgattgtc gtacgatttt ccattaaaat atctaatgct tcttgaattt tacgctcact
    11281 ttcactatct aagtttgcag tcgcctcatc taataacaga atgtcaggat ttttcacaaa
    11341 gcttcgtgca atatcgatgc gctgacgttg accgcctgac agcttcaagc cgcgctctcc
    11401 aacgattgtg tcgtaacctt gttcaaattc cataataaat tcatgacagt tcgcaagttt
    11461 tgcatagtga atcaattctt cttcaggcac ttctcgatcc acaccatata aaatattatc
    11521 gcgtatcgtt ccgttcatca tcgcattact ttgcatgacg taaccgattt ttctacgcca
    11581 atctgttaac gatagcgcat caatggaagt accatcatag taaatgccac cttgatcaat
    11641 ctcatacatc cgttcaatca aactgaacaa tgtgctttta cccgaaccag acggccctac
    11701 aaaagcagtc acttcgccac gcaatacatt aaatgacaca tctttaagca ctggtgtatc
    11761 atcatatcca aagtagacat gatcaaattt caagtcacca gttggaatct catcttgtaa
    11821 attcggtgcg gcgatgtttt caagtggttc atgtaaaatt tcataaatac gttggctcgc
    11881 ccctactgct tttttataat ccgttactaa tgtagaaatg ttgatcaaag gtatcgataa
    11941 gtttaaaacg taaaaaatca tcgctacgag tgtccccgct gaaatcgccc ccgaagcaat
    12001 acgcatgcct ccaaaaccta gaataatacc aatcgtaatc agcataataa tccctgaaat
    12061 cggttgaacg acggccgcaa ttttcgcttg tttcagcccc aagttataaa ttgtcttaag
    12121 attgctatgc gccttatcta attctagttt ctcagtattg gccactttca ctaaacgcat
    12181 ttctgtcaat acacgcccga gtagcccgct aaaattcgca atttcagttt gcgtattcgt
    12241 tgatattttt tgcataattt taccgagtgg cacaatcact aatataaata taggaatggt
    12301 aataaatgta aggagagtca tttgccaatc caaaacaaac agcataatta atgacccaat
    12361 gagcgtaatc accgcgggaa aaaaccctgg taacttttgt gatataaaat cattgatgac
    12421 tttcgtatca tctgttaaac gactcatcaa ttgcccgctt tcatttttat caaaaaacgg
    12481 cattttcaag tggataatat gctcccataa cacagaacga atggcataaa taattttttc
    12541 gcctatttta ttaagtaaat agtaaccgaa accacttaac acggcattca ctaaaaatac
    12601 cgctaccagt gcaataataa atacaggact aatcgattca aaagtaaatt tgtcgaccac
    12661 ctgccctgta aataaaggaa ctaataatcc ggtcaaacta cctattgaag caatcgtcac
    12721 ggccacgata atcaatccaa ctggccatga aattttcttt aataaaaata caagtgggtt
    12781 gcgtgctttc ataacttcat acctctttta ttttcgttat aatgatgcta taagacgccc
    12841 ctcagtcttc attcactacg aaggcagtct taccgcattt acgattacct ctacttttac
    12901 ccttcaacag attgttctca aagtgaccac aacagctcaa ctcggtttca tatcttctct
    12961 aatgcccatc atatcagtct gcattaacat ttataaacga caaactttgt ggtaaaatga
    13021 atcgtgttgt ttatcattta tagtttttta gatggaggga atacatatga aaaaaataat
    13081 attgtccatt gtggttgtat tcttcgcttc cactattata acaccttttg cacgtgcata
    13141 tacacccaca ccggttgaac ttgcacaaca aagtggttat cctgttacgt gggcttatca
    13201 acctgaaggc atgatcaaca tcagtcaaac aggacaaatt ttgtatgagt ttcaaagcga
    13261 acaacaatgg tatcctgctt ctatgaccaa actcatgaca atgtacttaa cgttacaagc
    13321 tgtcaaagaa aagaagttat ctttaaacga cacggtccaa atcactgatc aacattaccg
    13381 gatgtccacc ttaccagagt tgagtaatac gaaactttat cctggtgaaa catacaccgt
    13441 tgcagaattg cttcagatta cagtctccgc ttcaagtaac gcagctgcac tgattttagc
    13501 caatcaagtt tcagatagca catcagactt tgtcgataaa atgaatgaca ctgccaaatc
    13561 tctaggtatg acgcacaccc actatgtgaa tcctactggt gcagaaaatc gcttattatt
    13621 ggaattcgcg ccaaagaaat accaacacga atcatcttca acatcttcag cacgcgacta
    13681 tgccatactt gcccagcatg ttgtgaaaga cacacctaaa attttatatt tcaccaaaca
    13741 aattgcaccg acacaacacg gagtcacata ctataccttt aacgatttgt tagaaggtgg
    13801 taacatgagc ttacctggca cagatggatt gaaaacgggt tcgagtgata ttgcagacta
    13861 caacaattca ttaacgacaa aacgtggaaa attccgcatt ttccatatta ttatgggcgc
    13921 tggagattat aaacatctcg gtggcgagaa acagcgtaac atgatgagcg cgagtgccat
    13981 taattatacg ttttcacaat atgactataa aaagatattg tctaaaggca aacacaaaat
    14041 taatggaaaa tcgtactatg tgacagaaga tttatacgat gtcgtgccga aagacatgtc
    14101 taaaccttat catcttgtcg tcaaagatag tcaagtacat ctcgattatc cacgcaagtt
    14161 cattacgaaa aacgacgggc ctccaaccgt aaaagttgaa aatccgctta tctatgaatc
    14221 taaatctgtt gtcgtctcaa gttggcatgc atttccaata ttgacgtcac tcgcatttct
    14281 cgtcattgta ctcatccttg catttatttt acgtcgcttg ttgaaattgc tattcagaaa
    14341 ataaaaatcg tgatgtcgat tgatttaaca atgtgataac gattaaacta atgactttga
    14401 ataggcttga catataaaaa ctgagcagcc tcaaaacagt gcacccttat gatgagcaga
    14461 tgaaacacat atataactac catcataaaa taaagtggat gggcgtagaa tgtcataatt
    14521 ttacggctat ccactttttt atgatgcaat tttttgaaat tttatattaa atcattgatc
    14581 aacataaatc tattttccct ttactcatta gacaacggca catgatcacc attaacttct
    14641 gtgaaaaact tccaaggtag atgattttcc tttgcatatt ttacagcttc caatgtatct
    14701 cgatagtcca gtatactatc gttatcatct tggataacgt aaacttctgt tttaatatct
    14761 tttataaaat ttttccaatt aaaaactgtt tgtatatctt ctacactaaa cttttcattg
    14821 aaccattcac tttctaatag ataggcattt ataatagtct gattgtaacg tttagataat
    14881 attgttttat tatttagcat attttttcaa tactatcttt atcacatata attttattct
    14941 catacaaaaa tatgggtttg tttgcatctg agaaagccaa tcatatagga ttaccaaaac
    15001 gactattaat gaacactccc cccttcctta taatgtcttt tcatagcagt aaagaataat
    15061 ggcaatagaa aagcattgaa tattaatagc gaagtacata tgactaatgc aatcgtgata
    15121 gacatattgt ataaataacc gccaaacgta cctcctaagg cgtctcctat aaaaaatgaa
    15181 gattgtgata atccaaaaaa gaagcctaaa tgcggtttag gaaaaagctc taattctatc
    15241 aattcttgag cgattgccga tccagtatat aaaaatgctc taaacactaa aatcaataat
    15301 atgattaaac ttggtaacga tgttaaaaac attaagagta atagacctgc aacgagttca
    15361 cttataaaaa atagccactg tttataacga ctgacatttt tacttgcata aataggcgct
    15421 gcaaaaatag ctgtcaaact aatcattgcc atgaataaac ctatcagtga cactgatata
    15481 ccttgatgtt ttaaaataac tggaatgaat ggactaatta aactgactga cacgcctgca
    15541 atcattccta aagccactat tccaatcatc attaacttat attcttttaa agatttttta
    15601 gaatgtgtct gatttccctc agtttctgtg acttttttag agaatttagg aactaaaaaa
    15661 atagttagac aacagcatag cgccgccaaa atgagcacat atgccatagg actttcaacc
    15721 aagtaagaaa acaaccacac tagaatcccg gatagagatg tcccaatcat aattcctgta
    15781 tgattgccca tttcacttat agaaaccaaa gctgggcgat cttcttctgt ccctaaagac
    15841 acaatccaaa atcgcatgga gataatcaca agtgaagctc ctaatccggc aataaaacct
    15901 gataatcccg caatccagaa agaaaatgtg aataccctta atgctaaacc aaccgcataa
    15961 acgattacac caagtcttaa tgcaaagtga ggcgaaatct tatcccccaa ctttcctgta
    16021 aaaaatgaaa gtattcctgc aactgccatc atggtatacg aaaaaccaaa tgaggttaaa
    16081 gcatggtttt cttcaaacca taatgcatgt atcgtttttg aaagatacat tgagaaataa
    16141 aaaaagagac taaaccataa aaatttctga gctgaaggaa aattttttaa tgtattcaat
    16201 agtttca
//
LOCUS       DANHPA010000060        15734 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.060, whole genome shotgun sequence.
ACCESSION   DANHPA010000060 DANHPA010000000
VERSION     DANHPA010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 15734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15734
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.060"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..378
                     /locus_tag="PTC28_001506"
     CDS             <1..378
                     /locus_tag="PTC28_001506"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716790.1"
                     /translation="DWSLDSGEYRIKFDVDLLLDIDIEGRKQKIDSKIIVENTVITSF
                     PFQDIMLSIQTNDTQMQELISIFNTIPKEFKKLIYKNLIERYKEFILEHIDPNDALDS
                     LTYKYHLIDGATFVITNDFLKYY"
     gene            470..1606
                     /locus_tag="PTC28_001507"
     CDS             470..1606
                     /locus_tag="PTC28_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001670260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDK5716791.1"
                     /translation="MIKKYKKRDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTERDAK
                     IAEARLQAEVDKNGFLNNDITTFEEVYKLWLEQYENTVRESTYQRVLTLFDTAILKHF
                     KDVPVKKITVPYCQKVINKWNKQYSDMKAVRIYASNVLNYAVNLKIIADNPFNYTKAP
                     RKKEAPKDPSLKYYSSDELKQFLSFVEDNPLYFAMFRTLAFTGFRRGELMALTWNDID
                     FNKQTITVNKTYARGLNYKLVIQEPKTKSSLRTISIDDKTASILKTWRIHQRVESLKY
                     GHNTSDKHQPVFTDVTNNKPLYPEHTNKVLNAVCDKHNFKRIKVHGFRHTHCSLLFEA
                     GLSIQEVQDRLGHGDIKTTMDIYAHVTEKQRDQVAEKFANYINF"
     gene            complement(1700..3241)
                     /gene="guaA"
                     /locus_tag="PTC28_001508"
     CDS             complement(1700..3241)
                     /gene="guaA"
                     /locus_tag="PTC28_001508"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HDK5716792.1"
                     /translation="MEMAKEQELILVLDFGSQYNQLITRRIREMGVYSELHDHEISIE
                     EIKKMNPKGIILSGGPNSVYEDDAFTIDPEIYHLGVPVLGICYGMQLTTKILGGRVER
                     ANQREYGKAMIKAKSDELFFGLPEEQTVWMSHSDKVIEIPEGFEVIADSPSTQYAAIE
                     DKKRRIYGVQFHPEVRHTEYGNDILRNFVRRVCECTGEWTMENFIDIEIEKIREKVGD
                     RRVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDMVMEQFAEGFNMNI
                     IRVNAKDRFMSKLKGVSDPEQKRKIIGNEFVYVFDDEASKLKGVDFLAQGTLYTDVIE
                     SGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIELGIPEHLVWRQPFP
                     GPGLGIRVLGEITEDKLEIVRESDAILREVIREEGLEREIWQYFTVLPDIRSVGVMGD
                     YRTYDYTVGIRAVTSIDGMTSDFARIDWEVLQKISTRIVNEVDHVNRIVYDITSKPPS
                     TIEWE"
     gene            complement(3264..4730)
                     /gene="guaB"
                     /locus_tag="PTC28_001509"
     CDS             complement(3264..4730)
                     /gene="guaB"
                     /locus_tag="PTC28_001509"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002955225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HDK5716793.1"
                     /translation="MWENKFVKEALTFDDVLLIPAESNVLPKEVDLSVELSDKIKLNI
                     PVISAGMDTVTESKMAIAMARQGGLGVIHKNMSIERQADEVQKVKRSENGVITDPFFL
                     TPEESVYEAEALMGKYRISGVPIVDDKTSRKLVGILTNRDLRFIEDFSIKISDVMTQE
                     DLVTAPVGTTLQEAEEILQAHKIEKLPLVEDGVLQGLITIKDIEKVHEYPYSAKDAHG
                     RLLVAAAIGIAKDTDIRAQKLVEAGVDALVIDTAHGHSQGVINQVKAIKEKYPEITVV
                     AGNVATAAGTKALFEAGADVVKVGIGPGSICTTRVVAGVGVPQITAIYDCATEARNHG
                     KTIIADGGIKFSGDIVKALAAGGHAVMLGSLLAGTEESPGMVEMFQGRQYKVYRGMGS
                     LGAMESGSNDRYFQEDKTPKKYVPEGVEGRIDYKGPLADTIYQLIGGVKSGMGYTGSA
                     NLKALRDEAQFTKMSAAGLAESHPHDVQITKESPNYSF"
     gene            complement(4768..6036)
                     /locus_tag="PTC28_001510"
     CDS             complement(4768..6036)
                     /locus_tag="PTC28_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000793018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine permease"
                     /protein_id="HDK5716794.1"
                     /translation="MKRFLLSLQHLLAMYAGAILVPIIVGTSLNFTPEQIAYLVTVDI
                     FMCGVATFLQVYRGIGIGLPVVLGCTFTAVSPMILIGQTKGIDVLYGSLFLSGLLVIA
                     IAPFFASLVKLFPPVVTGSVVTIIGITLMPVAMNYMAGGQGAKDYGDPKHILLGFATL
                     VMILVLQRFAKGFLKSIAILLGLVFGTILASVFGFVDVAQVGQANWFELPKPFRFTGF
                     SFDVGATIVFFIVALVSLIESTGVYHALSKITGKQLERKDFRKGYMAEGIAITLGSIF
                     NAFPYTAYSQNVGLVSLSGVKKNDVIYGMVILLVICGCIPKLGALANIIPLSVLGGAM
                     LAMFGMVMAYGVRILIDINFKNQNNLLIIAISVGLGAGITAVPEAFKGLGDQFAWFTQ
                     NGIVLGTVSAIILNLFFNGINYQQNKENVK"
     gene            complement(6033..6617)
                     /gene="xpt"
                     /locus_tag="PTC28_001511"
     CDS             complement(6033..6617)
                     /gene="xpt"
                     /locus_tag="PTC28_001511"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HDK5716795.1"
                     /translation="MDALRRKIIEDGVVIDEKILKVDGFLNHQIDAALMYDIGQTFYE
                     QFVDQGVTKILTIEASGIAPAIMAAYRFDVPCLFAKKAKPNTLNAGYYQTDVHSFTKN
                     KTNTVIVSEEFLSADDKVLIIDDFLANGEAAIGLHRLVEQAGATTVGVGILVEKSFQQ
                     GRSRLEEAGLTVSSLCQVASLTGNKVTLVGDTES"
     regulatory      complement(6803..6905)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00167"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="purine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="guanine and/or adenine"
                     /db_xref="RFAM:RF00167"
     gene            7080..7502
                     /locus_tag="PTC28_001512"
     CDS             7080..7502
                     /locus_tag="PTC28_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein"
                     /protein_id="HDK5716796.1"
                     /translation="MTLYNISKCKVKRTEDEAVQYVDQLLKEGVKENQIVVLSKDKLN
                     TDRFHDSQIQHKTTTGTISEKFMRFFIGEDGEEAALTKFGFSDEQKEDLKQDILNDKI
                     VVMVQELKYGQEEYENHNVANQKLQDKHAPSEHQGDIE"
     gene            7698..8372
                     /locus_tag="PTC28_001513"
     CDS             7698..8372
                     /locus_tag="PTC28_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716797.1"
                     /translation="MHFVHIQSTQDPWYVPALAFYMDKLDPLVTEDESVFEQSLKTEK
                     TQYDFVFLVGIENDEVVSFATAHYEATTNVGFLVYLVSEHGDNCEQYLKATLEQIEKD
                     VNQISNQLHGRDVNFFMFESTFESPDVDTETADKIAFRRRFLVQHGYEKQSDITYLQP
                     SLNRNGKPVPMELYIKANIPLTKDIYGTSIKSAYIIKYVFANRIPRHVIYPLLVKMDL
                     RKEPYA"
     gene            8486..9085
                     /locus_tag="PTC28_001514"
     CDS             8486..9085
                     /locus_tag="PTC28_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HDK5716798.1"
                     /translation="MLTKEFAQRSELSEKQVRKIVQHLEERGYHLNKTEYRGREATDF
                     KEEDIELFQEIAERVAQTNSYDLAFEALEKEKDFLQVIVKENDQQLPADQQVPQLIQE
                     LRHEINQMREERQMLGQMVSQVHQQQEELKALHQQLHTQLETSNKSLEALTTAQQQQT
                     EQLSKTQETIETQTKEHQELAETIHRNEKKGFFQRLFGG"
     regulatory      9166..9268
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            9359..10465
                     /gene="thiO"
                     /locus_tag="PTC28_001515"
     CDS             9359..10465
                     /gene="thiO"
                     /locus_tag="PTC28_001515"
                     /EC_number="1.4.3.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine oxidase ThiO"
                     /protein_id="HDK5716799.1"
                     /translation="MKQTLIIGAGVMGLSIARQLNSKHRHIRIIDRSTPRMNASYAAG
                     GMLGAQNEFFEDTPLYRLAMKSRAMMPELAQALERETGVHIEYQQHGLIKVASQPQDV
                     QAVHQQYEFLHHHDHTVTQLSTEQLTQRFPHLDPSQSAAFKIQDDGQINANLYTQALI
                     ASVMQRSHIELMTHTEVYSLQHLHYCYRVETSKGTFEADELIIAAGAWSGALLQQLGF
                     ELPTHPVKGDVKLIASDYAGLKETIFNMNGCYIVPKLPNRFLIGATSDYDCWDTENND
                     DNLAWLDHESVNMIPALRSHHVIKTWTGIRPITEDEIPIMGEIAPQLFVTTGHYRNGI
                     LLSPIAGQLMAQLVDEDSEARHQLAPFRPKIKQI"
     gene            10540..11931
                     /locus_tag="PTC28_001516"
     CDS             10540..11931
                     /locus_tag="PTC28_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine transporter"
                     /protein_id="HDK5716800.1"
                     /translation="MSIFLVIINLIIFLLALLSLWVMAKKHVKFPKRVFFALGLGIVL
                     GLLLHLVYGVEGTVTSQTTDWVGLIGNGYIALLQMIVIPLIFVSIVAAFTKIEIGEKF
                     AKVGSFIFMFLIGTVTIAAMIGIIYALAFNLDASSIDLGQAENARSAEIADKAKGLTA
                     TTLPTQILELLPSNPFLDFTGARATSTIAVVIFAAFVGFAFLRVARKQPENGQTLKRG
                     IDAIYALVMAIVTFVLRLTPYGILAIMINTIATSDFAAIWTLGKFVIASYAALITMYI
                     IHLIILAVIGVNPVQYVKKTAEVILFAFTSRSSAGTLPLNVQTQTNRLGVPQAIANFS
                     GSFGLSIGQNGCAGIYPAMLAIMVAPVAGVEVNLQFIVTVIIVVVLSSFGVAGVGGGA
                     TFASILVLSALNLPVGLAGVLISVEPLIDMGRTALNVNDSILAGTGTAKLTKQLDEDV
                     FNSNHMDELTAQH"
     gene            complement(12364..13020)
                     /locus_tag="PTC28_001517"
     CDS             complement(12364..13020)
                     /locus_tag="PTC28_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDK5716801.1"
                     /translation="MIELKNITIQKGKRTIFDNVNLKFEPGKSYALIGHSGSGKSTLL
                     NTIAGFETLKKGEVQLDQKRLKADFRFYRDILGYVFQNYGLVDSMTINQNLDMALAFK
                     KGSRSGKKQLKTHSLQKVGLDIEGKRKVATLSGGEQQRVALARLILKQPRLILADEPT
                     GSLDEANGQKVMELLFDMVDDTRTLIIATHDLTLAQQCDEIIQVDTLKCHSSELETVQ
                     "
     gene            complement(13017..13346)
                     /locus_tag="PTC28_001518"
     CDS             complement(13017..13346)
                     /locus_tag="PTC28_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YxeA family protein"
                     /protein_id="HDK5716802.1"
                     /translation="MKKFILAAFAIIVVAVGLFLAFARIPYVDYFNPFLKKETSYAVV
                     PLGTQTYVDIQAYDESGEPLKYRLNFGGYDANFDHVKVLHKGTYVFHIDYIKDLSKWP
                     KKVSVEE"
     gene            complement(13350..15317)
                     /locus_tag="PTC28_001519"
     CDS             complement(13350..15317)
                     /locus_tag="PTC28_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1430 domain-containing protein"
                     /protein_id="HDK5716803.1"
                     /translation="MKWLKHLLDVFTLTLISLFLMVLLYEEDSEILTGSQVAIQVEGW
                     DYQYSKAEVFDRFERVAKDLDIAIFKVITDHKKGQVDKAIYTFNKKANHHTITPMNRS
                     YSYQQLTLDDLMKRDVRGDYFILDSVANPHQIKAALESVGLKVAVVPIKRWMIYIDVL
                     INRGVLLPFVTLLIIYILYHLYDRSKNFKTYATMRLHGYRFYNIFFLNIKKIVARWFL
                     LAMGVSLFSIGLLKWLGLDGQLGYFISHLILADIWFWMILFISSLLSYILLVSMNVPL
                     MIKGLKPYRLLHLINHVSKLSMLVLLTLLILPNFNQLKKLEKIQETETWWGKLDDYYM
                     IELKPIRRSINEERNFAKRFHQMIVYSEQHEQALLMRQNVLAEPSETNFVPGNGNVLF
                     VNQNFVDFFKSQLQDLPRLEDREGQVELYLPPQAKTKAAAIRDDFQEWVDFQLPNSAT
                     NTKVKVTQVDNPYQIYAFDVRTGLSTAYLKSPAILMLNAKDLTDDFYYATLSQGTFIF
                     KNYENIIRNIDRFNLKDDVQGVTNYKDNVIKKYREAQTQWIVYSFSSGLAISVLFIVT
                     LLDVLHYFEQHRQWLLMRKMFGFRRWQNYRNYIILNGLFTALIGAFLFEKTQNSNVIW
                     LFAIVLLFQFFVQWVYIHYLEKQFNVLIREV"
     gene            complement(15343..15633)
                     /locus_tag="PTC28_001520"
     CDS             complement(15343..15633)
                     /locus_tag="PTC28_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000726503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactococcin 972 family bacteriocin"
                     /protein_id="HDK5716804.1"
                     /translation="MKKKFLSTLTAGLLVVFIGATSLVSAESVHAEGGIWNHGVGSKY
                     VWSYYSHNGKYHTSTAIGKYRSDSGATKPGEEAQASAEKRWWWRNEAYYSVL"
BASE COUNT         4911 a         3257 c         2781 g         4785 t
ORIGIN      
        1 gattggagtc ttgatagtgg tgagtatagg ataaagtttg atgttgattt attattagac
       61 attgatattg aagggagaaa acaaaaaata gactcaaaaa taattgtaga aaatactgta
      121 attacgtcct ttccatttca ggacataatg ttgtccattc aaactaatga tactcaaatg
      181 caagaattaa ttagtatttt caacacaatt ccaaaagagt ttaaaaagtt aatttacaaa
      241 aatctaatag aaagatataa agaatttatt ttagaacata ttgaccctaa tgatgcactc
      301 gattcgctga catataaata ccatcttatt gatggagcta catttgttat tacaaacgat
      361 tttctaaaat actattaaat ctttatagaa tcatcacgcc acgcggtagc cattccgtaa
      421 cggcgtgtca atccaatctc acgcgtgcgg gctgaaagga ttgatattca tgattaagaa
      481 gtacaaaaaa agagacggtt caactgccta catgttcgtg gcctatttag gtaccgaccc
      541 tattacaggt aaacagaagc ggacaactag acggggcttc aagactgaaa gagatgcaaa
      601 gattgctgag gcacgactac aagcggaagt tgacaaaaac ggctttttaa ataacgatat
      661 aacaacgttt gaagaagttt ataaactgtg gcttgaacag tacgaaaata ctgtaagaga
      721 aagcacatat cagcgagtgt taaccttatt tgatactgct atactaaaac attttaaaga
      781 tgttccagtg aaaaaaatca cagtgccata ctgtcaaaag gtcatcaata aatggaataa
      841 gcaatattct gatatgaaag cagttcgtat atatgcgtct aacgtattaa attacgctgt
      901 taaccttaaa atcatcgctg ataacccttt taattataca aaggcaccac gtaagaaaga
      961 agcaccaaaa gacccgtcat tgaaatacta ttcaagtgat gagttaaaac agtttttaag
     1021 ttttgtcgag gataaccctt tatattttgc aatgttccgt acattagcat tcacgggttt
     1081 tagacgcgga gagttaatgg cattaacatg gaatgatatt gattttaata aacaaacaat
     1141 cactgtaaat aaaacatatg cacgagggtt aaactataaa ctcgttatac aagagccaaa
     1201 gacgaaatca tcacttagaa caatcagcat agacgacaaa accgcttcga tattaaagac
     1261 atggagaata caccaacgtg tcgaatccct taaatacgga cataatacat cagataaaca
     1321 ccagcctgta tttactgatg tgactaataa taagccacta tatcccgaac atactaataa
     1381 agtattaaat gctgtgtgtg ataagcataa tttcaaacgt attaaagtac atggttttag
     1441 acatactcat tgttcacttt tatttgaagc ggggttatct atccaagaag tacaagacag
     1501 attaggacac ggcgacatca aaaccactat ggatatttac gctcacgtca ctgaaaaaca
     1561 acgtgatcaa gtagctgaaa agttcgcaaa ttatatcaat ttttagcatt aacgtattca
     1621 aaacgtattc aaaacaaaat taaaaaggct agaaagtgca ttatagcaac gtttctaact
     1681 cttttattat gcttatatat tattcccact cgatggtact tgggggtttt gatgtgatgt
     1741 catacacaat tctgtttaca tgatcgactt cattcacgat acgtgttgag attttttgta
     1801 agacttccca atcgatacgg gcaaagtcac ttgtcatacc gtcgatagat gtcactgctc
     1861 ggataccgac tgtgtaatca tacgtacggt agtcccccat cacacctact gagcggatgt
     1921 ctggtaacac agtgaagtat tgccaaattt cacgttctaa accttcttca cgaatcactt
     1981 cacgtaagat ggcatctgat tcacgtacaa tttccaattt gtcttctgta atttcaccta
     2041 agacacggat acctaaacct ggtcctggga aaggctgtct ccatactaaa tgttctggaa
     2101 taccaagttc aatacctaat gcacggacct catctttaaa taatgtgttg attggttcga
     2161 ttaattcgaa ttccatatct tcaggcaaac cacctacatt atggtgtgat ttgatcgttt
     2221 gtgctgtttt tgtacctgat tcaatgacat ctgtgtaaag tgtaccttgt gctaagaaat
     2281 ccacaccttt gagtttagag gcttcgtcat cgaatacata aacaaactcg ttaccgataa
     2341 ttttgcgttt ctgctctgga tcagacacgc cttttagttt agacataaaa cggtcttttg
     2401 cgttcacacg gatgatattc atgttgaaac cttccgcaaa ctgttccatg accatgtctc
     2461 cttcaccttt acgtaataaa ccatggtcta caaagataca tgtcaactga tcaccaattg
     2521 ccttgtgtaa taatacggct acgactgatg aatcgacacc accgctcatt gcacaaagga
     2581 cgcgacgatc gccaactttt tctcggattt tttcgatttc gatatcgata aagttttcca
     2641 ttgtccattc gcctgtacat tcgcaaacac ggcgcacgaa gttacgtaaa atgtcattac
     2701 catactcagt atgacggact tctgggtgga attgcacacc atagatgcga cgctttttat
     2761 cttcaatggc agcgtattgc gtactaggac tatcagcaat cacttcgaac ccttctggaa
     2821 tttcgatgac tttatctgaa tgactcatcc aaacagtttg ctcttctggt aaaccgaaga
     2881 acagttcatc tgatttggct ttgatcatcg ctttaccata ttcgcgttgg ttcgcacgtt
     2941 ccactctacc gcctaatatt ttagttgtaa gctgcatacc ataacaaata cctaatacag
     3001 gtacgcctaa atgatatatt tcagggtcaa tcgtaaacgc atcatcttca tatactgagt
     3061 ttggaccacc tgataaaatg ataccttttg gattcatctt tttaatttct tcaattgaaa
     3121 tctcgtggtc atgtaattcg ctgtatacgc ccatttcacg aatacgacgt gtaattaatt
     3181 ggttgtattg actaccaaaa tcgaggacaa gaatcagctc ttgttctttt gccatttcca
     3241 tactctgtgt actcctttat caattagaat gagtagttcg gtgactcttt agtaatttga
     3301 acatcatgtg gatgactttc tgctaaacct gctgcactca tttttgtaaa ttgtgcttca
     3361 tcgcgtaatg ctttcaagtt cgctgagcct gtataaccca taccactctt cacaccaccg
     3421 ataagttgat aaattgtatc agctaatggt cctttgtagt cgatacggcc ttctacacct
     3481 tctggcacgt attttttagg tgttttgtct tcttggaaat aacgatcgtt tgaaccactt
     3541 tccatcgcac ctaatgatcc cataccacgg tagactttat attgacgtcc ttggaacatt
     3601 tcaaccatac ctgggctttc ttcagtacca gcaagtaagc tacctaacat gactgcatgg
     3661 ccacctgctg ctaatgcttt cacgatgtcg cctgaaaatt taataccacc gtctgcaatg
     3721 atcgttttac cgtgattacg tgcttctgtc gcacaatcat aaatcgctgt aatttgaggc
     3781 acacctacac ctgcaacgac acgtgttgta cagattgaac ctggtccgat acctacttta
     3841 acaacgtcag cacctgcttc aaacaatgct tttgtacctg ctgctgtcgc tacgttacct
     3901 gcaacaactg taatttcagg gtatttttct ttaatcgctt tcacttgatt aatgacacct
     3961 tgtgaatgac cgtgtgctgt atcgatgact aatgcatcca cgcccgcttc tactaatttt
     4021 tgtgcacgga tgtcagtgtc ttttgcaata ccaatcgctg cagctacaag taaacgacca
     4081 tgcgcatctt ttgctgagta tgggtattcg tgtacttttt caatgtcttt aattgtgatt
     4141 aatccttgta atacaccatc ttcaacaagc ggtaattttt cgattttgtg tgcttgtaaa
     4201 atttcttccg cttcttgtaa tgttgtccca actggagctg taactaaatc ttcttgtgtc
     4261 atgacatcag aaattttaat tgaaaagtct tcaataaatc tcaagtcacg gtttgtcagg
     4321 ataccaacaa gtttacgtga tgttttatcg tcgacgatag gcacacctga aatacggtat
     4381 ttacccatta atgcttctgc ttcataaaca ctttcttctg gtgtaaggaa gaacggatct
     4441 gtgattacac cattttctga acgtttaact ttttgtactt cgtctgcttg gcgttcgatg
     4501 ctcatatttt tgtgaatgac acctaaacca ccttgtcttg ccattgcaat cgccatttta
     4561 gactctgtaa ctgtgtccat tcccgctgaa atcacaggga tgtttaactt gattttgtct
     4621 gataactcta cacttaagtc gacttctttc ggtaatacat ttgattctgc tgggattaaa
     4681 agtacatcat caaaagtgag tgcttctttt acaaacttgt tttcccacat cattattgac
     4741 agcctccatt caattttcta cctattatta tttcacattt tctttgtttt gttgatagtt
     4801 tataccatta aaaaataaat tcaagataat tgctgaaacc gtacctaaca cgataccgtt
     4861 ttgtgtaaac catgcgaact gatcgccaag ccctttgaat gcttctggaa ctgctgtaat
     4921 tcctgcacct aaaccaactg aaatcgcgat aatcaataag ttgttttggt ttttaaagtt
     4981 aatatcaatc aaaatacgta caccataagc catcaccata ccaaacattg caagcatagc
     5041 gccaccgagt acagataatg gaataatatt cgcgagtgcg ccaagtttcg gaatacagcc
     5101 acaaattacc agtaaaatga ccatgccgta aatgacgtcg ttctttttaa caccagataa
     5161 tgacactaaa cctacatttt gagaataagc cgtataagga aaggcgttaa aaattgaacc
     5221 taatgtaatc gcaatccctt cagccatata accttttctg aaatctttac gctcgagttg
     5281 ctttcctgta atcttactca aggcgtgata aacacctgta gattcaatta agctgactaa
     5341 tgcgacgatg aaaaagacaa tcgtagcacc aacatcaaag gaaaaacctg tgaatctgaa
     5401 tggcttcggt aattcaaacc agttcgcttg accgacttgt gcaacatcaa cgaaaccaaa
     5461 cacactcgcc aaaatcgtac cgaacactaa gccaagtaaa atcgcaatcg actttaaaaa
     5521 cccttttgca aaacgttgta acactaaaat catcacaagt gtcgcaaaac cgagtaaaat
     5581 atgtttcgga tcaccgtagt ctttagcgcc ctgtccccct gccatataat tcattgcaac
     5641 gggcattaat gtaattccaa tgattgtcac gacacttccg gtaacgactg gcggaaacag
     5701 tttaactaat gatgcgaaaa acggtgcgat ggcaatgacc aaaagccctg ataaaaagag
     5761 tgaaccgtat aacacatcga tgcctttcgt ttggccgatt aaaatcatag gggaaactgc
     5821 tgtaaaggta catcctaaaa cgaccggcaa accaataccg atgccgcgat aaacttgaag
     5881 aaacgtcgcc acaccacaca tgaaaatatc cactgtcact aagtaagcaa tttgttcagg
     5941 tgtaaagttc aaacttgttc ctactattat agggacgaga atggcgcctg catacatcgc
     6001 aagtaaatgt tgtaaactta ataaaaatcg cttcatgatt ctgtatctcc cactaatgtc
     6061 actttgttgc ctgttaatga agcaacttgg cataacgatg acactgttaa gcctgcctct
     6121 tctaaacggg agcgaccttg ttggaaactc ttctctacta aaatgcctac gccgactgtt
     6181 gttgcgccag cctgttcaac taagcgatgt aaccctattg ctgcttcacc atttgctaaa
     6241 aagtcatcaa taattaatac tttatcatct gcagacaaaa actcttccga aacgatgacg
     6301 gtgttcgttt tgtttttagt aaacgagtgc acatctgttt ggtaataacc tgcattcaac
     6361 gtgttcggtt tcgctttttt agcaaataga caaggtacat caaaacgata agccgccatg
     6421 attgcgggtg caatacccga tgcctcaata gtcagaattt ttgtcacacc ttgatccaca
     6481 aactgttcgt aaaaggtttg accaatatcg tacatcaaag ctgcatcaat ttggtggttt
     6541 aaaaatccgt caactttaag aatcttttca tcaatcacga cgccatcttc aatgatcttt
     6601 cttctcaatg cgtccactcc aattcctcct cgaaaaagat atcaaaaaaa cccaaaacta
     6661 aagaatagcg tttcaggtat acgagtaaga gtcatacaat tgtaaagtgg cactatgtca
     6721 cgtctaaaga cctatcgtag tgatgcgcgg aaaatatgga taccgtacat atacaggcat
     6781 tgatacagcg cgttacatat tacatagatg tcccattact catagtcatg tcgtttaagg
     6841 caacatggta gaaacttcta aagccatatt cttcagatta tatgagcgtg ataaattatt
     6901 acatgatgat agcaaattta aagtacttac gcaatactat cgtactaaat caagtgtttt
     6961 cagaaattta tgtaaattct tgcttattca tgctgtaaac gccataataa gaatgtaacc
     7021 gtttaacacg taaagaatac gggtagataa atataaaaca tgagcgggag gttcatagca
     7081 tgacacttta taacatctca aaatgcaaag tgaaacgaac tgaagatgaa gcagttcaat
     7141 atgtagatca attattaaaa gaaggcgtta aagaaaatca aatcgttgta ttaagcaaag
     7201 ataaacttaa cacagatcgc tttcacgatt ctcaaattca acataaaaca acaacgggta
     7261 cgattagtga gaaattcatg cgctttttca ttggtgaaga tggtgaagaa gctgcgttaa
     7321 caaaatttgg tttctctgac gaacaaaaag aagatctgaa acaagacatt ttaaatgaca
     7381 aaattgtggt gatggttcaa gaactgaaat atggtcaaga ggaatacgaa aaccataatg
     7441 ttgcgaacca aaaactgcaa gataaacatg ccccatctga acatcaaggc gatattgagt
     7501 aatcattcac gcttatcgat agctcttaca acttcatcca agatttaagt taactttcgt
     7561 acacctcatt gtatcgaaag gattaagtct tgggtgaagt atttatttct ggaaattgag
     7621 ttttgtctcc cccattaatt gtgctatttc tcgctctata tatgctatac taaagccatt
     7681 aagagaggtg aagtgacatg cattttgtac atattcaatc aacccaagat ccatggtatg
     7741 tcccggcgtt agcgttttac atggataaac tagaccccct cgtaacagaa gacgagtctg
     7801 tatttgaaca atccttaaaa accgaaaaaa cacaatacga tttcgtattt ctcgtaggta
     7861 tcgaaaacga tgaagttgtc agttttgcga cagcgcatta tgaagcgaca acaaatgtag
     7921 gctttttagt ctatctcgtg agtgagcacg gtgacaattg tgaacagtac cttaaagcga
     7981 cacttgaaca aatagaaaaa gatgtgaatc aaatttctaa tcaactccac ggccgagatg
     8041 tgaatttctt catgtttgag tcgacatttg aatcacccga cgtggatact gagacagctg
     8101 ataaaattgc attccgtcgt cgctttttag tgcaacacgg ttatgaaaaa caaagtgata
     8161 ttacttattt acaaccttca ctaaatcgca atggaaagcc ggtaccgatg gagttgtata
     8221 ttaaagcgaa tattcctcta acgaaagata tttacggcac gagtattaaa tctgcctata
     8281 tcattaaata tgtttttgcg aaccgtattc caagacatgt gatttatccc ttactcgtta
     8341 aaatggattt gcgtaaagaa ccttatgcct aggcccttga aatcaaccgt taaagccgtt
     8401 acaatgatag agaggtaaga ctgacggttc actgaacgca cactaccgac agtctaaaaa
     8461 catgagagaa aggacctaat ggcatatgct aacaaaagaa tttgctcaac gatctgagct
     8521 tagtgaaaaa caagtccgta aaattgtcca acatcttgaa gaacgcggct atcatttaaa
     8581 caagactgaa tatcgtggac gtgaagcgac agactttaaa gaagaagata tcgaactctt
     8641 ccaagaaatt gctgaacgtg tcgcacaaac gaatagttac gatcttgctt tcgaagcgct
     8701 cgaaaaagaa aaagactttt tacaggtcat cgttaaggaa aacgatcaac aactacctgc
     8761 tgaccaacaa gtgccacaat tgattcaaga gttgcgccac gaaattaatc aaatgcgtga
     8821 agaacgtcaa atgttaggtc aaatggtctc acaagtgcat caacaacaag aagagcttaa
     8881 agcattacat caacagttac atacacagtt ggagacgagc aacaagtctc ttgaagcttt
     8941 aactactgca caacaacaac aaacagagca actgtcaaaa acgcaagaaa ccattgaaac
     9001 ccaaacgaaa gaacatcaag agcttgcgga aacgattcac cgcaacgaga aaaaaggttt
     9061 cttccaacgt ttatttggtg gttaagcaac attgataaca agctaaaaat gtaaaatttg
     9121 gatttaacgt ccgtttgagt aatactaatg aatcattaat aaaaaaacat aagctagggg
     9181 tgctcgaggt gagctgagaa agatggtatc ttaactcttt gaacctgacg tggttagaac
     9241 caacgaaggg aagcgcaata tgatgacgaa atcgtctcaa gataaatggc gagtagtcac
     9301 attattctaa tcatatatgc tttcctcttg catcctttta tgcaggaggt ctttttttat
     9361 gaaacaaacg ctgattattg gtgcaggtgt tatgggatta tctattgcac gccaactcaa
     9421 ttccaaacat cgtcatatcc gtatcattga tcgctccacc ccacgaatga acgcgtctta
     9481 tgctgcgggt ggtatgttag gtgcacaaaa tgaatttttt gaagataccc cactttatcg
     9541 acttgcaatg aaaagtcgtg cgatgatgcc tgaattagcc caagccttgg agcgcgaaac
     9601 gggggttcat atcgaatatc aacagcacgg actcatcaaa gtcgcttctc aacctcaaga
     9661 tgtccaagcc gtccatcaac agtatgaatt tttacaccat cacgatcaca ctgtcactca
     9721 actgtcgacg gaacaattaa cgcaacggtt tccccatctc gatccatcac aaagtgccgc
     9781 gttcaaaatt caagacgacg gccaaattaa tgcaaacctt tacacacagg cgcttattgc
     9841 ttcggtcatg caacgttccc atattgaatt aatgacgcat acggaggttt actcattaca
     9901 gcacctccat tactgttacc gtgttgagac gtcaaaaggc acgtttgaag ctgacgaact
     9961 cattattgca gctggtgcat ggagtggcgc attgcttcaa cagttagggt tcgaattacc
    10021 gacgcatcct gttaaaggtg atgttaaatt gattgcgtct gattacgccg gtttaaaaga
    10081 aacgattttt aatatgaacg gttgttacat cgtcccaaaa ttgccgaatc gcttcttaat
    10141 tggtgcaaca tccgattatg attgttggga cactgaaaac aatgacgaca accttgcttg
    10201 gcttgatcac gaaagtgtga acatgattcc cgcattacga tcacaccatg tcattaaaac
    10261 ttggacaggg attcgcccca ttacagaaga tgaaatccct attatgggcg aaattgcacc
    10321 tcaacttttc gtgacgacag ggcattatcg taacgggatt ttactgtcac ccattgctgg
    10381 tcaactgatg gcgcaactcg ttgatgaaga tagcgaagcc cgacatcagc ttgctccatt
    10441 tagacctaaa ataaaacaaa tataaaaaat atatcttgat tttatgtttc cttactatta
    10501 tcctattata gaagtcggaa ttaaaaagga agcgtattta tgtctatttt tttagtgatt
    10561 attaatttaa ttatttttct tctcgcctta ttaagcctgt gggtgatggc gaaaaaacat
    10621 gtcaaattcc ctaaacgcgt gttctttgca cttggtttag gtatcgtatt aggcctccta
    10681 ctccaccttg tttatggtgt tgaaggcaca gtcacatctc aaacaacgga ttgggtcggc
    10741 ttaattggga atgggtatat tgcattgcta caaatgattg tcattccact tatttttgtt
    10801 tctatcgtcg cggcatttac gaaaattgaa attggagaaa agtttgctaa agtcggcagc
    10861 ttcatcttca tgtttttgat tggtaccgta acaattgcag cgatgatcgg tattatctat
    10921 gcactcgcat tcaatttaga tgcttcaagt attgacttag ggcaggcaga aaacgctcgt
    10981 agcgccgaaa ttgctgataa agcaaaaggg ctgactgcga caacattacc aacacaaatt
    11041 ttagaattgt taccgtcaaa tccattttta gatttcactg gtgcacgtgc aacttctact
    11101 attgcagtcg tgatctttgc cgcatttgta ggctttgcat ttttacgtgt cgcacgtaaa
    11161 caacctgaaa atggtcaaac tttaaaacgc ggtattgatg ccatttacgc acttgtcatg
    11221 gctatcgtaa catttgtttt acgcctaacg ccttatggga ttttagcgat tatgattaac
    11281 acgattgcga cgagtgattt tgctgcgata tggactctcg gtaagttcgt gattgcgtcc
    11341 tatgcagcac tcattacaat gtacatcatt cacttaatca ttttggccgt tattggtgtc
    11401 aatccagtac agtatgtgaa gaaaacagcc gaagtgattt tattcgcatt cacttcacgc
    11461 tcaagtgccg gtacattgcc actcaacgta caaacgcaaa cgaatcgtct aggtgtgcct
    11521 caagctatcg caaacttctc gggctcattt ggactatcta tcggacaaaa tggctgtgcg
    11581 ggaatctacc ctgctatgct tgcgattatg gtcgcacctg tcgcgggtgt tgaagtgaat
    11641 ctacaattta tcgtgacagt catcatcgtt gtcgtgttaa gttcattcgg tgtagcaggt
    11701 gtagggggcg gtgcaacatt cgcttcaatc ctggtcttat ctgcattgaa cttgccggtt
    11761 ggccttgcgg gtgtcctcat ttcagtcgaa ccattgattg atatgggtcg tacagcactt
    11821 aacgtgaatg actctatctt agcgggtaca ggcactgcta aactgacaaa acaactcgat
    11881 gaagatgttt tcaattccaa tcatatggac gaattaacag cacaacatta agtaacacaa
    11941 tagttacaaa ttattagttc taggattgtc ttgatggatt cgctttccca ggggacttgc
    12001 ctcaactagc caacgcttaa tcatactgtg acataagtga agcgttggcg gattttcggc
    12061 tgcgcctgat cccttgggag tctcgtccat cacgacaatc ttactctaca aagtcataga
    12121 aagagggcaa ctttttacat taatgcgatg taacttgctt ttgatttcat cgttaattac
    12181 ttgctttatt gtaaattaga ttaaagtgta catttcgtac atactgaagc ttaattttca
    12241 tagagcgtct ataaaggcaa tcatatgtat ataaacataa tcaaagagac agaaggcaag
    12301 ttggctgtga tacgccattt ctttccagct aacattagtg cccctatctc ttttaactta
    12361 tgtttattgt acggtttcta attcgctact gtgacatttt agtgtatcaa cttgaataat
    12421 ctcgtcacat tgttgcgcga gcgttaaatc atgcgtcgcg ataatcagtg tgcgcgtatc
    12481 atcgaccata tcaaataaca gttccatcac tttttgtcca tttgcttcat ctaaagaacc
    12541 cgtgggctca tccgctaaaa tgagtcttgg ttgtttcaat atcagacgag caagggcgac
    12601 acgctgttgc tcacccccac ttaatgtcgc aactttacgc ttgccttcaa tgtcaaggcc
    12661 cactttttgc aaactatgtg tctttaattg tttctttcct gatctagaac cctttttaaa
    12721 agccagtgcc atatcgagat tttggttaat cgtcattgaa tcaacaagac cataattttg
    12781 aaatacatag ccgaggatat cgcgataaaa acgaaaatca gctttcaatc ttttttgatc
    12841 gagttgcact tcaccttttt ttaacgtttc aaaacctgca atggtattca gcaaagtcga
    12901 tttccccgag ccactatgac caataagcgc ataagacttc cccggctcga attttagatt
    12961 cacgttgtca aaaatcgtac gtttcccttt ttgtatcgtt atatttttca attcaatcat
    13021 tcttcaacac tcaccttttt aggccatttc gaaagatctt taatataatc gatatgaaaa
    13081 acgtaagtcc ctttgtgaag cactttcaca tgatcaaaat tggcgtcata tcccccgaaa
    13141 tttaaacgat atttaagggg ttcacctgat tcgtcatacg cttgaatatc cacgtatgtt
    13201 tgtgttccca atggcactac tgcataagag gtctcttttt taagaaaggg attaaaataa
    13261 tcgacatagg gaatacgtgc aaaagctaaa aataacccca ctgccactac gataatagca
    13321 aacgcagcca aaataaattt cttcactacc tacacctccc taattaatac gttaaattgt
    13381 ttttctaaat agtggatgta aacccattga acgaagaatt gaaacagtaa aacaatggcg
    13441 aataaccata tcacattact attttgtgtc ttttcaaata agaacgcgcc aataagagca
    13501 gtaaataaac catttaatat gatatagttg cgatagtttt gccaacgtct gaagccaaac
    13561 attttccgca tgagcagcca ttgacggtgc tgttcaaagt aatgtaacac atctaataac
    13621 gtgacgatga ataatactga tatcgcgagc ccactagaaa agctatatac aatccattgt
    13681 gtttgtgctt ctcgatattt tttaatcaca ttatctttat agttcgttac accttgcacg
    13741 tcatccttca aattaaaacg gtcgatatta cgaatgatat tttcataatt tttaaagatg
    13801 aaagtacctt gtgataaagt ggcgtaatag aaatcatctg ttaaatcttt ggcgtttaac
    13861 atcaaaattg cgggtgactt caaataagct gtagacaaac ctgtccgtac atcaaaggcg
    13921 taaatttggt atggattgtc cacctgtgtc actttaactt ttgtattagt tgctgaattt
    13981 ggaagttgaa agtctaccca ttcttgaaaa tcatcacgta tagctgcggc ttttgttttt
    14041 gcttgaggcg gtaaatacaa ctctacctgc ccctctcgat cttccaaacg cggtaaatct
    14101 tgtaattgtg acttaaaaaa gtctacaaag ttttgattaa caaacagcac gttcccattc
    14161 cctggtacaa aattcgtttc gcttggctca gctagcacat tttgtcgcat cagtaatgct
    14221 tgttcatgtt gctcgctata tacgatcatt tgatgaaagc gctttgcgaa atttctttct
    14281 tcatttatac tgcgccgtat tggtttcaat tcaatcatat agtaatcgtc taatttgccc
    14341 caccatgttt ctgtctcctg aattttttct aactttttta gctgattaaa gttaggcaat
    14401 ataagcagcg taagtaaaac gagcatactt aacttagata catgattgat aaggtgtaat
    14461 aatcgatacg gtttaaggcc tttaatcatt aatggtacat tcatacttac aagcaaaata
    14521 taagatagca aagaacttat gaataaaatc atccaaaacc atatgtccgc taagataaga
    14581 tggctaataa aatacccgag ttgtccatcc aagcctaacc atttcagcag tccaattgag
    14641 aagagactga cccccatcgc taaaaggaac catctcgcca ctattttctt aatattcaga
    14701 aaaaatatat tgtaaaaacg gtaaccgtgt aaacgcatcg tcgcatacgt tttaaaattt
    14761 ttacttcgat catacaaatg gtaaagtata tatatgatga gcaatgtgac aaaggggagt
    14821 aggacgcctc gattaatgag tacatcgata taaatcatcc atcgctttat cggaacaaca
    14881 gctactttaa gcccaacact ttctaaagct gctttgattt gatgaggatt tgcgacacta
    14941 tccaatatga aataatcccc ccgtacatcc cgcttcatca agtcatcaag ggttaactgt
    15001 tgatagctat atgacctatt cattggcgtg attgtgtgat gattcgcttt tttattgaaa
    15061 gtatagatgg ccttatcaac ttgccccttt ttatgatccg tgattacttt aaaaatcgca
    15121 atatctaagt ctttcgcaac cctttcaaaa cgatcaaaaa cttctgcttt cgaatattga
    15181 taatcccaac cttctacttg aatggccact tggctcccgg taagtatttc actatcttct
    15241 tcatacaaca ataccattaa aaatagactt attagcgtga gtgtaaacac atctaataag
    15301 tgtttcaacc atttcataac tcatccccta aaactctgat aattataata cactataata
    15361 tgcttcatta cgccaccacc atctcttctc cgctgacgcc tgagcttctt ctccaggttt
    15421 agtagctcca ctatctgatc tatattttcc tattgctgtg gaagtgtgat actttccatt
    15481 atgactataa tatgaccata cgtatttact tcccacgcca tggttccata ttccaccttc
    15541 tgcatgaaca ctttctgcac tcactaaact tgttgcacca ataaaaacga ctaataatcc
    15601 tgctgtaagt gtacttaaaa atttcttttt cataactgct tcctcctttt tgatagaatt
    15661 acacctatat tatattttta aacaactata tttgcaacat cattatatta tttttaataa
    15721 ctagtttttt atat
//
LOCUS       DANHPA010000061        15646 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.061, whole genome shotgun sequence.
ACCESSION   DANHPA010000061 DANHPA010000000
VERSION     DANHPA010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 15646)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15646)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15646
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.061"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(190..4890)
                     /locus_tag="PTC28_001521"
     CDS             complement(190..4890)
                     /locus_tag="PTC28_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729774.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HDK5716805.1"
                     /translation="MFNQQKQHYGIRKYAIGTSSVLLGMTLFITHDATASAAENNTPA
                     KTETNQAATISSRTSPTDVVQPNADTNATTATKETTPQSDSTALPQAAAQPQTGQTAS
                     KDTVDTNKTQTADSTTAPPVTDAPKANDDTTQPEAATVAKKEDAQTPSTADPTPQAQQ
                     PPQSKAPQETQQQSTVEDTTPQQNASTEVHPKNVGTASRKQQQTTPSTAPTPYTQQAD
                     EAMTDVTTTSADSNVQPLIPAEDQPKNTNTVDKATVATPPRDNAKTADPNKKMTRAAT
                     TQQDDAVDTLKSKEMTATIDKSFPAVKYYTLKNGKKVDAQLTDARQIIVNGEVITPTV
                     KYNKIDEHTAEYDLTAQNDSRSIDANFKFRLSVEGKTVDLQMTDYTNNNTEPQNVIRN
                     FSFVSQSLVSVNNQQKNAKLQTSKLSTNTMKSGDKSYHIDENFKKDFNDFMMYGFVSN
                     DDYSAGLWSNAQIGVGIGEQDFLRVYAQSTQTDNGVAVGLGSMPWFIQKDAAHPDAKN
                     QGLLPHVKVAIAEDENQDGEINWQDGAIAYRSIMNNPYGAEEVPDLVGYRIAMNFGSQ
                     AQNPFLKTLDGVKKFYLNTDGLGQSILLKGYNSEGHDSGHLDYANIGQRIGGVKDFKT
                     LLQKGADYGARFGLHVNASETYPESQAFNPALLRKDANGNYMYGWNWLDQGFNIDADY
                     DLIHGRKERFEALKQIVGDDLDFIYVDVWGNGQSGDNTAWPSHQLAKEINDLGWRVGV
                     EWGHGMEYDSTFQHWAADLTYGSYQNKGINSEVARFLRNHQKDSWVGNYPKYSGAADF
                     PLLGGYDMKDFEGWQGRNDYSAYIKNIFNVDVPTKFLQHYKVMRIVDGEPVKMTANGQ
                     TIDWTPEMQVDLQNEAGDQVTVKRKSNDYENDIDNYRSRTIELNGRTVLDGDSYLLPW
                     NWDANGQPLTGDNEKLYHWNKKGGSTTWTLPESWDTDQVVLYELSETGRKSPRTVAVK
                     DHQVTLDNIKADTPYVVYKVAQPDNTDVNWSEDMHVKDAGFNSQQLTPWTIEGNRDKV
                     SIEKSTTSNEMLKIDSPTKTTQLTQQLTGLVPGQRYAVYVGVDNRSDAAAHIAVTHNG
                     ETLASNETGQSIAKNYVKADAHSNNAATFKNGGSYFQNMYVYFVAPEDGKADLTIQRD
                     PGEGATYFDDIRVLENNANLLQNGTFNQDFENVPQGLFPFVVSEVEGVEDNRVHLSEK
                     HAPYTQRGWNNKRVDDVIDGKWSLKVNGQTGKDKMVIQTIPQNFYFEPGKTYEVSFDY
                     EAGSDDTYAFATGSGDISKNRNFEKTPLKNTVDGGKAKRVTFKVTGDENGQTWIGIYS
                     TKAPNDPRGVKNGNQINFEGTKDFILDNLSIREIDAPKPDATQESGDSAPMNETDERN
                     VNSNGTSADHSETTDVNVSATADDTAVKGEMTTNRTDAPTVTLPEATIVDEGTSNPVT
                     TTPTNTTQAMTNKADEMPQTMNNVPLTGIATDMMQSHAVGSMSTTLAATNQVAAPVHQ
                     TAGPMQHGMDSASTQHAPVQFDNVTAPLLPDEQFAELPKTGVTTPNTRGPLMAMIVGA
                     VLTAFGFRRQRKEK"
     gene            5328..6038
                     /locus_tag="PTC28_001522"
     CDS             5328..6038
                     /locus_tag="PTC28_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDK5716806.1"
                     /translation="MSEKLPLYYQVYKGIHSRIKAGEYKEGDKIPSERKLCEQFGVSR
                     ITVREALDRLEKDHVIKREHGKGSFVLGSQYTQFLNELYSFKDEIEKNGDEASTKMLS
                     IKLIPSTTFLQEKMNLKPYQYVYELKRLRLSNDVPLIYEVSYLPMRFCEGLEQFDFNR
                     VSLYETLNYHYGLQITNACENLTASKLSKEHAKLLNGVVDDSCMFIERFSYVDEDLIE
                     FTQSIASGHKYKYTVQLM"
     gene            6067..7182
                     /locus_tag="PTC28_001523"
     CDS             6067..7182
                     /locus_tag="PTC28_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HDK5716807.1"
                     /translation="MLHETDTYREIKQQPQTLKKTFDIVQGQQEAFKQFVNQIEQTHS
                     GKKLKVLFTGAGSSAYVGDVARMARNTSVMPNFEFESVPTTHFVTDPQLYIDNQTVYL
                     VVSFARSGNSPETKATVEFVNELSQHVYHLFITNNKDGFLGAYEAEKDNVFKVILPEE
                     TNDKSLAMTSSFSSMLFASYLLFGGEVSPQFFEIAESNFEWLEQQAQAVNAMTFSKVF
                     YVATGLIGELTKEVSLKLNELTAGQTEIARETTLGFRHGPKAGLSKDAIFIMMRSNGT
                     YHRQYEDDLIKEVGQVKDRYKMYILDGQSDASEHTVQLPQSESLSDMELALQYLMFGQ
                     LLAAQRSNALGLNPDNPSPDGFINRVVKGVTVYPVKG"
     gene            7189..8127
                     /locus_tag="PTC28_001524"
     CDS             7189..8127
                     /locus_tag="PTC28_001524"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexose kinase"
                     /protein_id="HDK5716808.1"
                     /translation="MIATHTFNPSVDITYEIDPLVVGEVHRVKQKIENPGGKGINVTK
                     VLHQLGAAHCAFGYLGGANGQWMADTLKEMGITSAFTLIQGQTRQSLALNDGQAQTEV
                     LEQGPTISESEQQAYFENVTQHAADAKVMTISGSSPQFETHSKFDHMARILKAFPHTY
                     NIVDTHAGELKALLEAKLPIHCIKPNQSEFEMLVGETQLTIDDCARLLQTHAYFSNCD
                     VFLTLGGDGALVKWKQDVYRATLPHKDIVNPVGSGDSTVAGIAYSVDQGLAPEALIRQ
                     ALACGTSNALQEKTGFIDVNQVAEIKNEIEVERFEW"
     gene            8121..9062
                     /locus_tag="PTC28_001525"
     CDS             8121..9062
                     /locus_tag="PTC28_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose 1,6-diphosphate aldolase"
                     /protein_id="HDK5716809.1"
                     /translation="MVKDLSRLVDENGIYAAVAVDQRGALRKLLGDTGTPENLSLFKK
                     LVAEVLTSHGSSFLVDPEYGLDAAKAKDAKAGLILSYEQTGYDKSRPGRLPRLIEDQS
                     VRRLVAAGADAVKFLLYYDVDESDEINQKKQAMIERVGTECQAENVPFLLEILTYDDS
                     IGDEKGEAFAKVRPHKVNEAMRVFSEPRFQVDTLKVEIPVNMNFVEGFGDKTVMTQAE
                     AAEAFKAQDAATNIPYIYLSGGVSAQLFMDSLQFAADNGAHFNGILCGRATWKGATAA
                     LVDAGEQEAKAWLESEGLDNLKALNEVNVKTATPILS"
     gene            9075..10847
                     /locus_tag="PTC28_001526"
     CDS             9075..10847
                     /locus_tag="PTC28_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase"
                     /protein_id="HDK5716810.1"
                     /translation="MSRFKISDTFLLDDKPIKILSGAIHYFRIPKDDWEDSLYNLKAL
                     GFNTVETYVPWNFHETIENEYDFKGHKDLKHFIELAAKLGLYVIVRPSPYICAEWEFG
                     GFPAWLLNDRTMRIRSRDEKYLEKVKKYYHELFKILTPLQIDQGGPIIMMQVENEYGS
                     FGQDHDYLRSLAHMMREEGVTVPFFTSDGAWDQCLRAGSLIEDDILPTGNFGSRTVQN
                     FENLKTFQQEFSKKWPLMCMEFWDGWFNRWGEPVIKRDSDDLAEEVRDAVKLGSLNLY
                     MFHGGTNFGFWNGCSARGTKDLPQVTSYDYHAPLDEAGNPTEKYFALQEMLKEEMPDI
                     EQHEPRTKTFMSMKAIPLAAKVNLFEVLEDISTKTTSFYPQTMEEAGSGYGYMVYRTR
                     IHKATEQEKLRIVDARDRVHCFVDQQHVYTAYQEEIGDQFEVTLTSDQPQIDVLVENM
                     GRVNYGYKLLASTQRKGLGQGLMQDLHFVQGWEQFDIDFDRLTANHFKREWSEQQPAF
                     YKYTFDLAESNNTHIDVSGFGKGVVLVNGFNIGRYWEIGPSQSLYIPKAFLKQGQNEI
                     IVFDSEGKYPESIQLIKTPKFSEV"
     gene            10862..11341
                     /locus_tag="PTC28_001527"
     CDS             10862..11341
                     /locus_tag="PTC28_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HDK5716811.1"
                     /translation="MAIIGSRIDGRLIHGQVANLWATKLNIGRFIVIDNEVAQSDIDK
                     QALKLATPAGIKLSVLPVEKAANNINNGKYDSQRVMVIAKRPDRFVELVNNGVKIEEL
                     NVGNMSQTNETRSVTNSINITDEDVNNFKLLQEKGVNIISQMVPNDKSVDFMSLIKE"
     gene            11363..12262
                     /locus_tag="PTC28_001528"
     CDS             11363..12262
                     /locus_tag="PTC28_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002460936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HDK5716812.1"
                     /translation="MDILWWQVLLLTLYAGYQILDDLQFNIFGHPVFAGIISGLIMGD
                     VTTGLIIGGGMQLTILGVGTFGGASRIDANSGTVLAVAFSVALGMNPQQALATLAVPV
                     ASLMIQTDILARFTNTFFAHRIDKKIEQMDYKGIERNYLYGAIPWALSRAIPVFLALV
                     FGGSVVGKIVDYLNGDLKWLGDGLTVAGAVLPAVGFAILLRYLPLKKHYPYFILGFII
                     TALMVTVFNGLSGIGTSVAGLDKNFTMSFSSLPMLAIAAIGFALAAMEYSRSSQSKTI
                     AANHGGNQATDADDEGEIDDDEL"
     gene            12321..13133
                     /locus_tag="PTC28_001529"
     CDS             12321..13133
                     /locus_tag="PTC28_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002311319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HDK5716813.1"
                     /translation="MPQTPYKLTDKDFRQMNIRSLLFFQWGWNYERMQGSGYLFTILP
                     QLRKIYGDDSPELQEMMRTHAQFFNTSNFFNTIIMGIDIAMEEKERYASKESVKGIKV
                     GLMGPFAAVGDAIFGSLVPTIFGAIAANMAQDGNPFGALLWFVAMLAIIVFRWKQLKF
                     AYKEGISLVTTMQHRLESLTNAATLLGVFMVGALVATMIRVQFAWKPQIGDLTVNIQN
                     NADMILPRLLPLIIVFAIYWLLGRKKMNSTRAIFIVIIVSIILSALGVISKI"
     gene            13155..13556
                     /locus_tag="PTC28_001530"
     CDS             13155..13556
                     /locus_tag="PTC28_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDK5716814.1"
                     /translation="MEKLILVSHSAFCEGLKDSVEMILGPQDYIHTAALTPEMGPEDF
                     EKALDALIDEGDQVTVFADLLGGTPANTVSKKIMNGSDLNLYVGMSLPMVMSYINGKM
                     IGEQPDYVQKAQEGIIHINALLNQDDDDDDE"
     gene            13588..14742
                     /gene="nagA"
                     /locus_tag="PTC28_001531"
     CDS             13588..14742
                     /gene="nagA"
                     /locus_tag="PTC28_001531"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HDK5716815.1"
                     /translation="MTYVIINGVIYTEDGVISDGYLIVEEGKIKAIETGAYTGDLEVV
                     DAKGRHILPGFIDVHIHGGYGEDAMDGSYDGLKYLAEHLLIEGTTTFLATTMTQSQEA
                     IEKALHNISVYHQKQDVTNAAEVGGVHLEGPFISEHKIGAQNPAFIQRPTVELLRHFQ
                     EKAKGLIKIVTIAPEVEGASEVIQTLKDEFIFSMGHTEVDFDQANTAAAEGVKHVTHL
                     YNAGVGFHHRNPGMFGAAWTNDRLSTEVIVDGVHAHPQSVAIAYQHKGPEKMYLITDA
                     MRAKGMPEGDYELGGQKVIVKDHEAHLESGSLAGSVLKMNEGLRNLIQFTGESLETLW
                     PATSLNQAKALRIDDHKGSIAVGKDADLVVVDDDIHVYQTIKMGRVHNII"
     gene            complement(14929..15444)
                     /locus_tag="PTC28_001532"
     CDS             complement(14929..15444)
                     /locus_tag="PTC28_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002446907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HDK5716816.1"
                     /translation="MTNLKFDPVHSNLEFSIRHLMVSKVKGTFHDYTVDVTGDINDLS
                     SLQSVVTINVNSIDTKNADRDNHLKTADFFNAESHQQIVFKSKKVTENKVTGDLTIAG
                     QTNEETFDFENLGVSNNPLTGGKVTGFTASGTIDREKYGMNFNQALETGGVMLGKDVK
                     FEFHGEFSIED"
BASE COUNT         4628 a         2828 c         3411 g         4779 t
ORIGIN      
        1 cattgacgta cttttaccga atactaaaag aaattgttac tctaaaaaat taaaactcaa
       61 tatcattaac gaatacttac attctgattt gtcttcatat gatttagcaa tcaaatatgg
      121 tattcgcagc gcaactcaag tcaaaaattg gataacaatg tgtactgagg gtaatgtccc
      181 agcctattcc tatttttctt tacgttggcg tctgaatccg aatgctgtta agactgcgcc
      241 aactatcatc gccattaaag gtccacgtgt atttggagtc gtaaccccag ttttaggtaa
      301 ttcggcaaac tgttcatctg gtaatagtgg tgctgtgaca ttgtcaaatt gtacgggtgc
      361 gtgttgcgtt gaagcactgt ccataccatg ttgcataggt cctgctgttt gatgcacagg
      421 tgccgccact tgatttgtag ctgctagtgt tgttgacatt gaacccaccg catgagactg
      481 catcatatcg gtagcgatgc cagttaaagg aacattgttc atcgtttgtg gcatctcatc
      541 agccttattt gtcatagctt gtgttgtatt cgttggtgtt gtagtgacag ggtttgacgt
      601 gccttcatct actatcgttg cttcaggcag tgtaacagtt ggtgcatctg ttctgtttgt
      661 cgtcatttcg cctttgactg ctgtatcatc tgccgttgca ctgacattga catcagttgt
      721 ctcactatga tcggctgatg taccgtttga attgacgtta cgctcatctg tttcattcat
      781 tggtgcgcta tcaccgcttt cttgtgtggc atcaggcttc ggtgcgtcaa tttcacggat
      841 agaaaggttg tctagaatga aatctttcgt cccttcgaag ttgatttgat tgccattttt
      901 cacgcctcgt ggatcattgg gtgctttcgt tgagtaaata ccaatccaag tttgaccatt
      961 ttcatcaccc gtcactttaa atgtcacccg tttcgctttg ccaccatcga ctgtattttt
     1021 caatggtgtc ttttcaaagt tacgattttt agaaatgtcc ccactacctg tcgcaaatgc
     1081 atacgtatca tcagaacctg cttcataatc aaatgacact tcatacgttt ttcctggttc
     1141 gaagtagaag ttttgcggaa tcgtttggat gaccatttta tctttacctg tttgaccgtt
     1201 tactttaagt gaccatttgc catcaatgac atcatcgaca cgtttattat tccatccgcg
     1261 ttgtgtatac ggtgcgtgct tttcagataa gtgaacgcga ttatcttcaa cgccttcaac
     1321 ttctgacacg acgaacggga ataacccttg tggtacattt tcgaagtctt ggttgaatgt
     1381 gccgttttga aggagattcg cgttattttc taacacacga atatcatcga aataagtggc
     1441 accttcacct gggtcgcgtt gaatcgtcaa gtctgcttta ccatcttctg gcgcaacgaa
     1501 gtacacgtac atgttttgga agtaactacc gccattttta aacgtcgcag cattgttact
     1561 atgtgcatct gctttcacat agtttttcgc gatcgattga cctgtttcgt tacttgcgag
     1621 cgtctcaccg ttatgtgtca ctgcaatatg cgccgctgca tcactgcggt tatcgacgcc
     1681 cacatagaca gcgtaacgtt gtcctggcac taaacctgtc aattgttgcg ttaattgcgt
     1741 tgtttttgtt ggactatcga tttttagcat ttcatttgat gttgtcgact tttcgatgct
     1801 cactttatct cgattgcctt cgattgtcca aggtgtcagt tgttgtgagt tgaagccggc
     1861 atctttcacg tgcatgtctt cgctccagtt cacatctgtg ttgtctggtt gtgcgacttt
     1921 ataaacgaca tacggtgtgt ctgctttaat attatcgagt gtcacttgat ggtctttcac
     1981 tgccactgta cgtggtgact tacgacccgt ttcagataat tcgtatagca cgacttggtc
     2041 tgtatcccat gattcaggca gtgtccaagt cgttgaaccg ccttttttat tccagtgata
     2101 taatttttcg ttatcgccag ttaatggttg gccgttcgca tcccaattcc atggtaaaag
     2161 gtatgaatcg ccatcgagta ctgtgcgacc attcaattcg attgtacgtg agcggtagtt
     2221 gtcaatgtcg ttttcatagt cgttagattt acgtttaaca gtgacttgat caccggcttc
     2281 attttgtaaa tcgacttgca tttctggtgt ccagtcaatc gtttgaccat tggcagtcat
     2341 tttaacaggc tcaccatcga caatacgcat cactttataa tgttgtaaaa actttgttgg
     2401 tacatcaaca ttgaaaatat ttttaatgta agcagagtaa tcgttacgac cttgccaacc
     2461 ttcaaaatct ttcatgtcat aaccgccgag caatgggaag tcagctgcac ctgagtattt
     2521 tggatagtta ccgacccatg aatctttttg atggttgcgt aagaagcgtg ctacctctga
     2581 gttaatccct ttattttggt acgatccata cgttaagtcg gctgcccaat gttggaacgt
     2641 ggagtcatat tccataccgt gaccccattc gacaccgacg cgccatccta agtcgttgat
     2701 ttctttggct aattgatgtg atggccaagc tgtattgtcg ccggattgtc cattccccca
     2761 tacatcgaca taaataaagt cgaggtcatc accgacaatt tgtttgagtg cttcgaagcg
     2821 ttctttacgc ccgtgtatta aatcgtaatc tgcatcgatg ttaaagcctt gatcgagcca
     2881 gttccagcca tacatatagt ttccattcgc atctttacgt aagagggcag ggttgaatgc
     2941 ttgagactct ggatatgttt cagatgcatt cacatgaaga ccgaaacgtg cgccataatc
     3001 tgcccctttt tgaagtaacg ttttaaagtc tttcacgcca cctatacgtt gaccaatatt
     3061 cgcgtaatct aaatgaccag agtcgtggcc ttcactgtta taacctttta ataaaatgga
     3121 ttgccctaaa ccatctgtat tgagatagaa ttttttcaca ccatctaacg tctttaaaaa
     3181 tgggttttgc gcttgagaac caaagttcat cgcgatacgg tacccaacaa ggtcaggtac
     3241 ttcttcggca ccatatggat tgttcataat gctacgataa gcaattgcac cgtcttgcca
     3301 gttaatttca ccatcttgat tttcatcttc cgcaattgcg actttgacat gtgggagtag
     3361 tccttgattt ttcgcatctg gatgtgcagc gtctttttgg ataaaccatg gcattgagcc
     3421 taaaccgaca gcgaccccgt tatctgtttg tgtagactgt gcgtagacac gtaagaagtc
     3481 ttgttcacca atgccgacgc caatttgtgc gttactccac aatcctgcac tgtaatcatc
     3541 atttgacacg aaaccgtaca tcataaagtc gttgaagtcc tttttgaaat tttcatcgat
     3601 atgatatgat ttatcgccgc ttttcattgt atttgtagac agttttgatg tttgcagttt
     3661 ggcatttttc tgttgattgt ttacagatac gagcgattga cttacaaagc taaagttgcg
     3721 aatgacgttt tgtggctctg tgttgttgtt cgtgtaatct gtcatttgta aatcaacggt
     3781 cttaccttca actgataaac ggaatttaaa attggcatca atcgaacgtg aatcattttg
     3841 tgctgttaag tcatattcag ccgtatgttc atcaattttg ttgtatttga ctgttggtgt
     3901 aatgacttca ccattgacga tgatttgacg tgcatccgtc agttgtgcat cgactttttt
     3961 accatttttc aatgtgtaat atttaacggc tggaaaactt ttatcgatcg ttgctgtcat
     4021 ttcttttgac ttcaatgtat cgacggcatc atcttgttgt gtcgttgctg cacgtgtcat
     4081 ttttttgttc ggatcagcag tcttagcatt gtcacgtggt ggtgtcgcaa cggttgcttt
     4141 gtcaactgtg ttcgtatttt taggttgatc ttctgcaggg attaacggct gtacgttgct
     4201 gtcggcactg gttgttgtga catctgtcat tgcttcgtct gcttgttgtg tgtaaggtgt
     4261 cggtgccgtt gatggcgttg tttgttgttg ttttcttgaa gcagtaccta catttttagg
     4321 gtgtacttca gttgatgcgt tttgttgtgg cgttgtatct tcaactgttg attgttgttg
     4381 cgtttcttga ggtgcttttg actgaggcgg ttgttgcgct tgtggtgtag ggtctgcagt
     4441 cgatggtgtc tgagcatctt cttttttggc tacagtcgca gcttctggct gtgttgtgtc
     4501 gtcattagct tttggcgcgt ctgtcacagg aggagcggtt gtggaatctg ctgtttgcgt
     4561 tttatttgta tctactgtgt ctttcgatgc tgtttggccc gtttgaggtt gcgctgctgc
     4621 ttgcggtaac gctgttgaat ctgattgtgg tgttgtctct ttagtcgccg ttgtagcatt
     4681 cgtgtctgca ttaggttgaa cgacgtcggt tggcgaagtg cgagaagaaa ttgttgctgc
     4741 ttgatttgtc tctgtctttg caggtgtatt gttttcagct gcagatgcag ttgcgtcatg
     4801 tgtgataaat aatgtcatgc ctaataatac tgatgaagtc ccgattgcat atttccggat
     4861 accatagtgt tgtttttgtt gattaaacat ttgtctatgc actcctcata agattaattg
     4921 aatagaatat ataattttta tacttctttg taaaccctta caaatccggt gttatcgtac
     4981 ttttggcaga ttgtagagtc gaaaataata ccactttttt atcgctatgc agcgcttttg
     5041 gaattgcaag aaatgtacac agcgacattg tttgttacga ttgttcaata gtacgcaaac
     5101 taaaaaaaat ttagagtggt tataaccaga aaaacgatag aaaaaatttt tttgagcaat
     5161 gattttgaaa gggttttcta aaagtgcaac aatagtgttg taagttgcca tggacaatgt
     5221 tgtaaacgtt ttatttaaaa ggcgaaaatt aaaattaaag tctttacaaa aatagtaaga
     5281 gtctttataa ttcaaggtgg ttataaccag taggggtgaa tcatatcatg tctgaaaaat
     5341 taccattgta ctatcaagtg tacaagggca ttcatagtcg tattaaggct ggtgagtata
     5401 aagaaggcga taaaatacca tcagaacgca agctgtgtga gcagtttggc gtgagtcgaa
     5461 ttactgtgcg tgaagcttta gatcgcttag aaaaagatca tgtcattaaa cgcgaacacg
     5521 gcaaaggatc ctttgtactc ggtagtcaat atacacagtt tttgaacgag ctttatagtt
     5581 ttaaagatga gatagaaaaa aatggtgatg aggcgagtac aaaaatgtta agcattaaac
     5641 tcatcccatc taccacgttt ttgcaagaaa aaatgaattt gaaaccctat caatatgttt
     5701 atgaattaaa gcgcttacga ctttcgaatg atgtcccact catatacgag gtgagttatt
     5761 tgccgatgcg tttttgtgaa gggctcgagc aatttgattt taatcgtgtc tctctttatg
     5821 aaacgctcaa ttatcattac ggtttgcaga taacgaatgc ttgtgagaat ttgacggcaa
     5881 gtaagttgag taaagaacat gcgaaattgt tgaatggtgt agtcgatgat agttgcatgt
     5941 ttattgaacg ctttagttat gtagatgaag atttgattga gtttacacaa agcattgcaa
     6001 gtggacataa atataaatac accgtgcaat tgatgtaacc ataaaaatga tatgggaggt
     6061 agtattgtgt tacatgaaac agatacttat cgcgaaataa agcaacagcc acaaactttg
     6121 aaaaaaacgt ttgatattgt tcaagggcaa caagaggcat tcaagcaatt tgtgaatcaa
     6181 atcgaacaaa cacattcagg gaaaaaatta aaagtacttt tcacaggcgc aggatcaagc
     6241 gcttatgtcg gagatgtcgc acgtatggca cgcaacacct ctgtaatgcc aaactttgaa
     6301 tttgagtctg taccgacaac acattttgtg accgatccac aactttatat tgataaccaa
     6361 acagtgtatc ttgtcgtatc gtttgcgcgt tccggtaaca gtccagaaac gaaagcgaca
     6421 gtcgaatttg tgaatgaact ttctcaacat gtgtatcact tattcattac aaataataaa
     6481 gatggcttct taggggcata cgaagcggag aaagacaatg tgttcaaagt gattttgcct
     6541 gaagaaacaa acgacaagtc actcgcaatg acatccagct tttcatctat gttatttgca
     6601 agttatttac tcttcggtgg tgaagtgagt ccacaatttt tcgagattgc agaatcaaac
     6661 tttgagtggc tcgaacaaca agctcaagct gtgaacgcaa tgacattttc aaaagtgttc
     6721 tatgtagcga caggtttgat tggtgagtta acaaaagaag tgagcttaaa actgaacgaa
     6781 ttaacggcag gacaaacaga aatcgcacgt gaaacaacgt taggtttcag acacggtcct
     6841 aaagcaggtt taagcaaaga cgctattttc attatgatgc gtagtaatgg tacatatcat
     6901 cgtcaatacg aagacgactt gattaaagaa gtgggccaag tgaaagatcg ttacaaaatg
     6961 tatattttag acggtcaaag tgatgcaagt gagcatactg ttcaattacc acaatctgaa
     7021 tcattatcag atatggagct cgcattgcaa tatttaatgt ttggccagtt actcgctgcg
     7081 caacgttcta atgcattagg tttaaatccg gataacccaa gtccagacgg cttcattaac
     7141 cgtgtcgtta aaggggtaac ggtttatcca gttaaagggt gaggaattat gattgcaaca
     7201 catacattta atccatctgt agacattacg tacgagattg atccacttgt agtcggtgaa
     7261 gtccatcgtg tcaaacagaa aattgaaaat ccaggcggta aaggaattaa cgtgacgaaa
     7321 gtactacatc aattaggtgc ggcacactgt gcgtttggct atctcggcgg cgccaatggt
     7381 cagtggatgg ccgatacgtt gaaagagatg ggaattacaa gtgcgtttac gttaatccaa
     7441 ggacagacaa ggcaaagttt agcgttgaat gatggccaag cccaaacgga agtccttgag
     7501 caagggccaa cgatttcaga aagcgaacaa caagcttatt ttgaaaatgt cacacaacat
     7561 gctgcggatg cgaaagtgat gacgatcagc ggcagttcac cgcagttcga aacgcattcg
     7621 aagtttgacc atatggcacg cattttaaaa gcattcccac atacgtacaa tattgtcgat
     7681 acgcatgcgg gcgagttaaa agcactgtta gaagcgaagt taccgattca ctgtattaaa
     7741 ccgaatcaat ctgaatttga aatgctagtc ggtgaaacac agttaacgat tgatgattgt
     7801 gcacgtttgt tacagacaca tgcgtatttt agcaattgcg acgtcttttt aacactaggt
     7861 ggagacggtg cgcttgtgaa gtggaagcaa gatgtttatc gtgcgacatt gccacataag
     7921 gatattgtta atccagtcgg ttcaggtgat tcgactgttg caggtattgc ttacagtgtg
     7981 gatcaaggtt tagcgccaga agcgttaatt cgtcaagcct tagcatgtgg gacgtcgaat
     8041 gctttacaag aaaaaacagg ctttattgat gtcaaccaag tcgctgaaat taaaaatgaa
     8101 atagaagtgg agaggtttga atggtaaaag atttaagtcg tttagtagat gaaaatggaa
     8161 tctatgcagc agtggcagta gaccaacgtg gcgcattaag aaaattgtta ggtgacacag
     8221 gaacacctga aaacttgtca ttatttaaaa aattggtagc agaagtgtta acgtcacatg
     8281 gttctagctt tttagtagac cctgaatatg gtttagatgc tgcaaaagcg aaagatgcaa
     8341 aagcaggctt aatcttatct tatgaacaaa caggttatga taagtctcgg cctggacgtt
     8401 taccacgtct aattgaagat caaagcgtac gtcgtcttgt tgcagcaggt gcagacgcag
     8461 tgaagttctt actttactat gatgtagatg aatcagacga aatcaatcaa aagaaacaag
     8521 cgatgatcga acgtgtagga acagagtgtc aagctgaaaa cgtcccattc ttacttgaaa
     8581 tcttaacata cgatgacagc attggtgacg aaaaaggtga agcatttgcg aaagttcgtc
     8641 cacacaaagt gaacgaagcg atgcgtgtat tcagtgaacc acgtttccaa gtagacacat
     8701 tgaaagtgga aattcctgta aacatgaact ttgttgaggg atttggagac aaaacagtga
     8761 tgacgcaagc agaagcggca gaagcgttta aagcgcaaga tgcagcaaca aacatccctt
     8821 atatttactt aagtggtggc gtatctgcgc aattatttat ggattcactc caatttgcag
     8881 ctgataatgg tgcacatttc aacggtattt tatgtggtcg tgcaacatgg aaaggtgcaa
     8941 cagcggcact tgtagacgca ggtgaacaag aagcgaaagc atggttggaa agcgaaggtc
     9001 ttgataactt gaaagcgctt aacgaagtga atgtaaaaac agcaacacca attctatctt
     9061 aatgaggtga tgatgtgagt cgtttcaaaa taagcgatac atttttatta gatgacaaac
     9121 caatcaaaat attgtccggt gccatccatt actttagaat accaaaggat gactgggaag
     9181 attcattata caatttaaaa gcactcggat ttaatacagt ggaaacttat gtcccttgga
     9241 actttcatga aacgattgaa aatgaatacg acttcaaagg acataaagat ttaaaacatt
     9301 ttatcgaact tgcagcaaag cttggacttt acgtcatcgt acgaccttct ccttacattt
     9361 gtgcggagtg ggagttcggt ggatttccag catggttatt gaatgaccgt acaatgcgca
     9421 tccgttcgag agatgagaaa tatttagaaa aagtgaaaaa atattatcat gaactgttta
     9481 aaatcttaac gccattgcaa attgatcaag gcggcccgat tatcatgatg caagtcgaaa
     9541 atgaatacgg ttcattcggt caagatcacg actatttacg ttcacttgct cacatgatgc
     9601 gtgaagaagg tgtgacagta ccatttttca catcagacgg tgcttgggat caatgtttaa
     9661 gagcggggag tctcattgaa gacgatattt taccgactgg caattttggt tcacgtacag
     9721 ttcaaaattt cgaaaactta aagacgttcc aacaagaatt tagtaaaaag tggccgttaa
     9781 tgtgtatgga attttgggat ggctggttta atcgctgggg cgaacctgtg attaaacgag
     9841 acagtgatga tttggctgaa gaagtgcgcg atgcagtgaa attaggctca cttaatttat
     9901 atatgttcca tggggggaca aactttggtt tttggaacgg ttgctcggca cgtggtacga
     9961 aagatttacc acaagtgaca tcttatgact atcatgcgcc gttagatgag gcgggtaatc
    10021 caacagaaaa atactttgct ttacaagaga tgctcaaaga agaaatgcct gacattgagc
    10081 aacatgagcc aagaacgaaa acatttatgt caatgaaagc tattccattg gcagccaaag
    10141 tgaatttatt cgaagtactt gaagacattt caacaaaaac gacaagcttc tacccacaaa
    10201 cgatggaaga agcgggttct ggctatggtt atatggtata tcgtacgcgt atccataaag
    10261 cgacagaaca agaaaaatta cgaattgtag atgcaagaga ccgtgtccac tgttttgtag
    10321 accaacaaca tgtctacaca gcgtatcaag aagaaattgg agatcagttt gaagtcacat
    10381 taacgtctga ccaaccacaa atcgatgtgc tcgttgaaaa tatgggtcgt gtcaactacg
    10441 gctacaaatt attagcatcg acacaacgta aaggtttagg tcaaggactc atgcaagatc
    10501 ttcattttgt acaaggttgg gaacaattcg atatcgactt cgaccgttta acagcgaatc
    10561 atttcaaacg tgaatggtct gaacaacaac ctgcttttta caaatacaca tttgacttag
    10621 cagagtcgaa caatacgcat attgatgtaa gcggtttcgg aaaaggtgtt gtactcgtca
    10681 acggattcaa catcggtcgt tattgggaaa ttggaccgtc acaatcgctc tacattccta
    10741 aagcattttt gaaacaagga caaaatgaaa ttatcgtgtt tgactcagaa ggaaaatatc
    10801 cagaaagtat ccaactgatt aaaacaccaa aattttctga agtataagga gaggatttat
    10861 tatggcaatt atcggaagca gaatcgatgg gagattaatt cacggacaag tggcaaactt
    10921 atgggcaaca aaattaaaca ttggacgatt catcgttatt gataatgaag tcgctcaaag
    10981 tgatatcgac aaacaagcat taaaacttgc gacaccagca ggaattaaat taagtgtttt
    11041 accagttgaa aaagcagcta acaacatcaa caacggtaaa tatgattcac aacgtgtgat
    11101 ggttatcgca aaacgtcctg accgatttgt tgaacttgtg aacaatggtg tgaaaattga
    11161 agaattgaat gtaggtaaca tgtcacaaac aaatgaaaca cgttcagtga cgaactcaat
    11221 caacattact gacgaagatg taaacaattt caaattatta caagaaaaag gtgtcaacat
    11281 tatctcacaa atggtaccaa acgataaatc agttgacttt atgtcattaa tcaaagaata
    11341 gaactatcag gaggcgtttc tattggatat tttatggtgg caagtattgc tcttaacgct
    11401 gtacgcaggt tatcaaattt tagatgattt gcaatttaat attttcggac atcctgtatt
    11461 tgcagggatt atatcaggtt taatcatggg cgatgttact actggtttaa ttatcggcgg
    11521 agggatgcag ttaacaattc taggggtagg tacatttggt ggtgcatcaa gaatcgatgc
    11581 aaactctggt acggtattag cggttgcgtt ctcagtagca ctcggaatga acccacaaca
    11641 agcgcttgcg acacttgctg tacctgtagc gagcttaatg attcaaacag atattttagc
    11701 acgtttcaca aacacattct ttgcacatcg tattgataaa aaaattgaac aaatggatta
    11761 taaaggtatt gaacgtaact acttatacgg tgcgattcca tgggcattat ctcgtgcgat
    11821 tccagtattt ttagcacttg tattcggtgg tagcgtggta ggtaaaatcg ttgactactt
    11881 gaacggtgat ttaaaatggt taggtgacgg tttaacagtg gcaggtgcgg tattaccagc
    11941 agtcggtttc gctattttgt tacgttactt acctttgaaa aaacattatc cttactttat
    12001 tttaggtttt atcattacag cattaatggt gacagtcttt aacggtttat caggtatagg
    12061 gacatcagtt gcaggtttag acaaaaactt tacaatgtcg ttctcatcat taccaatgtt
    12121 agcgattgca gcgattggtt ttgctttagc ggcaatggaa tacagtcgaa gctcacaatc
    12181 taaaacaata gctgcaaatc atggaggaaa ccaagcaaca gatgcggatg atgaaggaga
    12241 gattgacgat gacgaattat aatcaaacgg aaacacaaat ttctcaaaac gctgatgcaa
    12301 attcaaagtt aacaggtgca atgccgcaaa caccttataa actgactgat aaagacttta
    12361 gacaaatgaa catacgtagc ttattgttct tccaatgggg ttggaactac gagcgtatgc
    12421 aagggtctgg ttatttattc acgatccttc cacaattacg taaaatttat ggtgacgatt
    12481 cacctgaatt acaagaaatg atgcgaacac atgcgcaatt cttcaataca agtaacttct
    12541 ttaacacgat tattatgggt attgatattg cgatggaaga aaaagaacgc tatgcatcaa
    12601 aagaatctgt caaagggatt aaagtcggtt taatgggacc atttgcggct gtaggggatg
    12661 cgattttcgg ttcattagtt cctacaattt tcggtgccat tgcagcaaac atggcgcaag
    12721 acggtaatcc attcggtgca ttgctttggt ttgtcgcaat gctagctatc atcgtattca
    12781 gatggaaaca gttgaaattc gcgtacaaag aagggatttc acttgtgaca acgatgcaac
    12841 accgcttaga atcattaacg aatgcagcaa cattgctcgg ggtattcatg gtcggtgcac
    12901 tcgtcgctac gatgattcgt gtgcaatttg cttggaaacc acaaattggt gatttaacag
    12961 tcaacatcca aaacaatgcc gacatgattt taccaagatt attacctttg attattgtat
    13021 ttgccattta ctggttatta ggacgtaaaa aaatgaactc aacacgtgca atcttcattg
    13081 tgattatcgt ttcaattatt ttgtcagcgt tgggtgttat ttcaaaaatt taattcgatg
    13141 ggagcatttg aactatggaa aagttaatcc ttgtgagtca cagcgctttt tgtgaagggc
    13201 ttaaagacag tgtagaaatg attcttgggc ctcaagatta cattcatact gcggcattga
    13261 caccagaaat ggggcctgaa gattttgaaa aagcattaga cgcactcatt gatgaaggcg
    13321 atcaagtgac agtttttgca gatttattag gcggtacacc agcgaatacc gtttctaaaa
    13381 aaatcatgaa tgggtcagac ttaaatcttt atgtagggat gagtttacca atggtgatga
    13441 gctatattaa tggtaaaatg attggtgaac aacctgacta tgtgcaaaaa gcgcaagaag
    13501 gtatcattca catcaacgcg ctgttaaatc aagacgatga cgatgatgat gaataaaaca
    13561 atcaaattac agtaaagaag gtatactatg acatatgtaa ttataaatgg cgtcatttat
    13621 acagaagacg gtgtgatttc agacggttac cttatagtgg aagaaggtaa aattaaagca
    13681 attgaaacgg gtgcgtatac tggggactta gaagttgtag atgcaaaagg acgtcacatc
    13741 ttacccggtt tcattgacgt gcacatccac ggtggttatg gtgaagatgc gatggacggc
    13801 tcatacgatg gcttgaaata tttagcggaa catctattaa tagaaggcac aacgaccttt
    13861 ttagcgacga caatgacaca gtctcaagaa gcgattgaaa aggcattaca caatattagt
    13921 gtttatcatc agaaacagga tgtgaccaat gctgccgaag taggtggtgt acatttagag
    13981 ggaccattca tttctgagca caaaatcgga gcacaaaatc cagcatttat ccaaagaccc
    14041 acagtggaat tgttgagaca ttttcaagag aaagctaaag gactcattaa aattgtgaca
    14101 attgcacccg aagttgaagg tgcaagtgaa gtcattcaaa cgttaaaaga tgagtttatc
    14161 ttttcaatgg gtcatactga agtcgatttt gatcaagcga acacagcagc agcagagggt
    14221 gtcaaacacg tcacacactt atacaatgcg ggtgtcggtt tccatcatag aaatccaggt
    14281 atgtttggtg cagcttggac aaacgaccga ttaagtacag aagtcattgt cgatggtgtc
    14341 catgcacatc ctcaatcagt cgcaattgcg tatcaacata aaggaccaga aaaaatgtac
    14401 ctgattacgg atgcgatgcg tgcaaaagga atgcctgagg gtgactatga attaggaggc
    14461 caaaaagtga ttgtgaaaga tcacgaggcg cacttggaat cgggttcgtt agctggtagt
    14521 gtcttgaaaa tgaatgaggg tttacgcaat ttgattcaat ttacgggaga aagtttagaa
    14581 acattatggc cagcaactag cttgaatcaa gcgaaagcat tgcggattga tgaccataag
    14641 ggcagtatcg ctgtaggcaa ggatgcggat cttgtggttg tagatgatga catacacgtg
    14701 tatcaaacga taaaaatggg gcgtgtgcat aacatcatat agtagtacat ggatacgacg
    14761 atagcaagtg ggcgaaacac cataagctat cgtctttatt atgttgaagt atttttgtac
    14821 ttcaataaaa tcatcaaaaa atccgagata gtacatcatt atgaatgacg aacatctcgg
    14881 atatttgttt aactaagatg gtattgtctt agagaaatct gagttttatt aatcttcaat
    14941 agaaaactca ccgtggaatt cgaatttaac gtctttacca agcataacgc cacctgtctc
    15001 taaagcttgg ttgaaattca tgccgtattt ttcacggtca attgtacctg atgctgtgaa
    15061 accagtaact tttccgcctg taagtgggtt gttgctcaca ccaaggtttt caaaatcgaa
    15121 tgtttcttcg tttgtttgac cggcaattgt caaatcacca gtaactttgt tttctgttac
    15181 ttttttagat ttgaaaacga tttgttggtg agattccgca ttaaagaaat ccgctgtttt
    15241 taagtggttg tcacgatcag cattttttgt gtcgattgag ttgacattaa ttgttacaac
    15301 agattgtaat gagcttaagt cattaatatc tcctgtcacg tcaactgtgt aatcgtgaaa
    15361 agttccttta acttttgaaa ccattaagtg gcggattgaa aactccaaat tactgtgtac
    15421 tggatcgaat ttaaggttag tcatagaaag accctccgtg taaaatattt ttaattagtt
    15481 atatgatata aaaaatatac caaaaggttc gtattttgta aagcaaaaag atttttaaca
    15541 ttaaaatatg tcttgcgata gttacactac tattttgaag aagtgagtac gattcgtcaa
    15601 agaaagtgat tttgcaagga ggttgcaagg attttattgc atatag
//
LOCUS       DANHPA010000062        15611 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.062, whole genome shotgun sequence.
ACCESSION   DANHPA010000062 DANHPA010000000
VERSION     DANHPA010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 15611)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15611)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15611
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.062"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(449..949)
                     /gene="queF"
                     /locus_tag="PTC28_001533"
     CDS             complement(449..949)
                     /gene="queF"
                     /locus_tag="PTC28_001533"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HDK5716817.1"
                     /translation="MTEGRSKDELQDITLLGNQNNTYNFDYRPDVLETFDNKHQNRDY
                     FVKFNCPEFTSLCPITGQPDFATIYISYIPNVKMVESKSLKLYLFSFRNHGDFHEDCM
                     NIIMNDLIELMDPHYIEVWGKFTPRGGISIDPYTNYGRPNSKYEKMAEHRLMNHDMYP
                     EKIDNR"
     gene            complement(969..1850)
                     /locus_tag="PTC28_001534"
     CDS             complement(969..1850)
                     /locus_tag="PTC28_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDK5716818.1"
                     /translation="MNTKVKGILAILISAIGFSFMAVFFRLSGDLPVFQKSLARNFVA
                     MFIPLFFILKYKQPFFGKLSSQPLLVTRSVLGLMGVLLNIYAIDHMVLSDADILMKLN
                     PFWTILLSLIFLKEFIQKYQITSMVIAIIGMLFVVKPEFSSDVIPAIVGLLSGVFAAS
                     AYTAVRALSTREAPYTIVFYFSFFSVIVLIPFVAFTFEPMSLIQIVYLILAGLSAAVG
                     QIGITVAYSYAPAKDISIFTYASIIFTAIIGFILFNESPDFYAIIGYIIILSASYYMF
                     EKARRSTSSKHRQQPSK"
     gene            2475..2873
                     /gene="nrdI"
                     /locus_tag="PTC28_001535"
     CDS             2475..2873
                     /gene="nrdI"
                     /locus_tag="PTC28_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class Ib ribonucleoside-diphosphate reductase
                     assembly flavoprotein NrdI"
                     /protein_id="HDK5716819.1"
                     /translation="MKVVFYSFTGNVRRFIKRTELDNTLEINETNTLEKVTEPFIIVT
                     GTIGFGEVPQPVQQFLECNHENLKGVAASGNRNWGTNFAKAGTRIAEMYNVPLLMKFE
                     LHGNAHDTIEFKEKVVNFYENYGTKTIQAH"
     gene            2836..4941
                     /gene="nrdE"
                     /locus_tag="PTC28_001536"
     CDS             2836..4941
                     /gene="nrdE"
                     /locus_tag="PTC28_001536"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000855513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HDK5716820.1"
                     /translation="MKTMEQKQYKHIELNNQVTKRNENGFFQLEKDQEALASYLEEIQ
                     DKTVHFDSELERLHFLVDNHFYYNVFEEYSEAQLVELIAFATEIPFRFASYMSASKFF
                     KDYALKTNDKSQYLEDYHQHVMIVSFYLAKGNVELAKKLIQAMVEQRYQPATPTFLNA
                     GRARRGELVSCFLLEVDDSLNSINFIDSTAKQLSKIGGGVAINLSKLRARGEAIKGIK
                     GVAKGVLPIAKALEGGFSYADQLGQRPGAGAVYLNIFHYDVEEFLDTKKINADEDLRL
                     STISTGLIVPSKFFELAKEGKDFFMFAPHTVEQEYGVTLDDINIDEYYDRLVENPNIM
                     KKSKDAREMLNMIAQTQLQSGYPYLMFKDNANRVHANSNIGQIKMSNLCTEIFQLQET
                     SVIHDYGVDDEIKRDISCNLGSLNIVNVMESNQFRDSVHTGMDALTVVSDEANIQNAP
                     GVKKANSELHSVGLGVMNLHGYLAKNHISYESEEAKDFADVFFMMMNYYSIERSMQIA
                     KERGETFKDFDKSDYASGRYFERYTSEDFLPKSEKVKALFANHTIPTRDDWKVLQAEV
                     EKYGLYHAYRLAIAPTQSISYVQNATSSVMPIVDQIERRTYGNSETFYPMPFLSPQTM
                     WYYKSAFNIDQMKLIDLIATIQTHIDQGISTILYVNSEISTRELSRLYVYAHHKGLKS
                     LYYTRNKLLSVEECTSCAI"
     gene            5169..6131
                     /gene="nrdF"
                     /locus_tag="PTC28_001537"
     CDS             5169..6131
                     /gene="nrdF"
                     /locus_tag="PTC28_001537"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HDK5716821.1"
                     /translation="MIAVNWNTQEDMTNMFWRQNIAQMWVETEFKVSKDIASWKSLTE
                     AEQDTFKKALAGLTGLDTHQADDGMPLIMLHTQDLRKKAVYSFMGMMEQIHAKSYSHI
                     FTTLLPSKETDELLDVWVLEEPHLKYKSEKIVGTYHKLWGKEASIYDQYMARVASVFL
                     ETFLFFSGFYYPLYLAGQGRMTTSGEIIRKILLDESIHGVFTGLDAQSLRNELSESEK
                     QKADKEMYQLLEDLYANEASYTRSLYDPIGLTDDVMNYVRYNGNKALSNLGFEPYFEE
                     REFSPIIENALDTSTKNHDFFSVKGDGYVLALNVESLQDEDFIF"
     gene            complement(6512..6826)
                     /locus_tag="PTC28_001538"
     CDS             complement(6512..6826)
                     /locus_tag="PTC28_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716822.1"
                     /translation="MPKVYGATVDQETRCTHYNTPFDVIAIKFKCCHKYYPCFKCHNE
                     SEKHRPKRWHSDEFDERAILCGVCGYEMPIETYMMTESCPECEAHFNNRCKFHYHHYF
                     EI"
     gene            complement(6851..7771)
                     /locus_tag="PTC28_001539"
     CDS             complement(6851..7771)
                     /locus_tag="PTC28_001539"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009383088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HDK5716823.1"
                     /translation="MNHSSILQDLEKLIPASIIKVDEPLKRYTYTETGGNADFYISPE
                     RYEDVQKVVKYAYEHDIPVTYLGNGSNIIIRDGGIRGIVLSLLSLNHIVTSDATIIAG
                     SGAAIIDVSRKARDVSLTGLEFACGIPGSIGGAVYMNAGAYGGEVKDVIDYALVIDER
                     GELLKLTHNELELDYRNSIIQQQHYVVLEAAFTLTPGKQEDIQEKMDDLTERRESKQP
                     LEYPSCGSVFRRPPGHFAGQLIQNADLQGHRIGGVEVSRKHAGFMVNVNHGTATDYEN
                     LIHHVQNVVKEKFGIELEREVRIIGEDLEK"
     gene            complement(7925..8443)
                     /locus_tag="PTC28_001540"
     CDS             complement(7925..8443)
                     /locus_tag="PTC28_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrpB family protein"
                     /protein_id="HDK5716824.1"
                     /translation="MYRHVQPFMTENQQPFYATQYEKYQHILFDLLDSPVKFTQHIGG
                     TFHFNYPTEPILDILVGVENLHDITSLDEKRLNYAGFYRLHHAYEKKVVMAKFNNLNE
                     LKQEVRLHIIQMHTPTFQQYQQFHELLTHHPAAIQFFKAQKASLEQPFMPIRDYENLK
                     KQWFKQLQQYTT"
     gene            8554..9447
                     /locus_tag="PTC28_001541"
     CDS             8554..9447
                     /locus_tag="PTC28_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EMYY motif lipoprotein"
                     /protein_id="HDK5716825.1"
                     /translation="MKKWIKIIILSFLMIGSLTACMASSQKQMHAFDQQMKTVAEKER
                     IVNRTLEEMNLNQLYDLSQTNTTDANKKAFEQFKKQIDDKLKPAMKVYHQEAKALPEP
                     NKDLKALKSTYLEGIKGKEEIIEKLDQFIVLCQNSIRANENILEFTQQFEKHRSRVEA
                     QISSAKQTSQGIEDSTKLEERLDENNHHIKEKAETSIREKDGKAQMQAIQEEVIPLVQ
                     TQIKDLNEMQLRDEMTNHARQNAVQMYYSLERYYQERLKTIDYNQKLAQANIRKLITK
                     AKDLDSYNAPYENQRDQLNSN"
     gene            9612..9932
                     /gene="ytxJ"
                     /locus_tag="PTC28_001542"
     CDS             9612..9932
                     /gene="ytxJ"
                     /locus_tag="PTC28_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol system redox-active protein YtxJ"
                     /protein_id="HDK5716826.1"
                     /translation="MAIKLTSIDQFEQVIEENPYIFILKHSNTCPISENAFDQFNKFL
                     YERDMDGYYVVVQEARELSDYIAEKTGVQHESPQALYFVNGEVKWHDSHKNVNVSELA
                     KAEE"
     gene            10287..11402
                     /locus_tag="PTC28_001543"
     CDS             10287..11402
                     /locus_tag="PTC28_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HDK5716827.1"
                     /translation="MKILIAMDEFNHIISSYDANRYVEEGVASQIEDADIVQVPLFNG
                     RRELLNAVFLWKSGTQYQIPVHDAAMQAVDATYGQTDDGITVIEAGQFLKGTLPLVEQ
                     SSYGVGEVMRHALDKNAQHMIISVGAIDTFDGGAGMLQALGAQFYDDEGRTVDMTKGG
                     GQIKHVRRIDLEDLHEGLKQCRIQIVTDFESKLYGKQSAVMKTYPNLQIDREEAVVID
                     NLLWYWSELFKHQHHIVLGTVERGGAGGGIAATLHALFKAEIQTSHELVDQITGLNAL
                     VKQADLVVFGEGIDEQDEMIETSSLRIAELCQQYDKPAIALCGTADKFERFEALGVTG
                     MFNTFMDMPKTLTDFKMGIQLRNYAVQAIRLLRTSFN"
     gene            complement(11555..12778)
                     /gene="pepT"
                     /locus_tag="PTC28_001544"
     CDS             complement(11555..12778)
                     /gene="pepT"
                     /locus_tag="PTC28_001544"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HDK5716828.1"
                     /translation="MKEQIIERLSRYVKINTQSDPNSETTPSTERQWDLLHLLESELK
                     AMGLDTDLDRHGYLFATLEANIETEAPTIGFLAHVDTSPDFNAANVNPQMIDNYDGGV
                     ITLGTSGREINPEVFPDILKVKGHTLMTTDGTSLLGADDKAGVVEIMEALQYLIAHPE
                     IKHGHIRVGFTPDEEIGRGPHKFDVERFDADFAYTMDGSQLGELQFESFNAAEAKITF
                     NGVNVHPGSAKDKMVNALNLANTFHQALPVNEVPEHTEGYEGFFHLMELNGNVEKATA
                     QYIIRDHDSTSFENRKQQLIEIQKDINARYYYDPVHLVINDQYRNMAEKIKPLQHIID
                     IPKAVYADLNITPNTEPIRGGTDGSQLSFMGLPTPNLFTGCDNFHGPYEYASIDVMAQ
                     AVQVILGIVQKVAEK"
     gene            complement(12802..13305)
                     /locus_tag="PTC28_001545"
     CDS             complement(12802..13305)
                     /locus_tag="PTC28_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HDK5716829.1"
                     /translation="MTYIFYYIAQFLISFVSTMLFSIIFNAPKRLLLASGFVGAMGWS
                     IYKFTVDMNYGIVMAAFLGSFILAMMSHTMSRRYKRPVIIFIVPGIIPLVPGGAAYEA
                     TRLLVTNAYTPAVNQFLEVTLTSGAIAFGILCAEIFYYIYTRLKHAYGKLKGKHYRKG
                     YHMNNRI"
     gene            complement(13321..14082)
                     /locus_tag="PTC28_001546"
     CDS             complement(13321..14082)
                     /locus_tag="PTC28_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HDK5716830.1"
                     /translation="MAEALTIIDENKVIDVVLLAGKVLLESGAETYRVEDTMGRIAAS
                     FGLEDTYAFVTSTAIIFSLNDRTNTRLVRVRERTTDLEKIALANNISRKISRNTLTLD
                     EAKAELIHLEHASLQYSFIIKFLAASIACGFFLFMFGGVRHDFIYAVIAGGAAFLTFD
                     LVQRFIQIKFFSEFISATVVITVAAFFTKNGWATNQDIITIAGVMPLVPGILITNAIR
                     DLMAGELLAGMSRGVEAALTAFAIGAGVAIVLLIF"
     gene            complement(14577..>15611)
                     /locus_tag="PTC28_001547"
     CDS             complement(14577..>15611)
                     /locus_tag="PTC28_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HDK5716831.1"
                     /translation="IAGIYLFHRLQYAESHDFRFSKSYITVLMTIVGLLLAFQPIPIE
                     NYMIQLSFVPLLFLGRYTNSFYTVFAAVIIALVGYFVLSTTLTYAVSLLVIAAIVSTI
                     GPFLKQNHVVSIQILNILSIIILTIIAMIMPSFDTVEVLYLIPISMVATLVTAVFYVD
                     LLRFFSLIERYENEDTVDYLTGLGNVKEFDRHLNEMARVAENEQQSLALLLIDIDGFK
                     DVNDAYTHHAGDAVLKQMSHLLQNYVPKKTRIFRNGGEEFSIVLRDCSLDECVKLAES
                     IRKAVEKSNFHLPDKIVIKLSVSIGVGYMTHESHKSQRKLFKDADDMLHVAKNEGRNQ
                     VMFSPIINPK"
BASE COUNT         5184 a         2571 c         3110 g         4746 t
ORIGIN      
        1 gatgtaaaaa aatgttggat aagtgtggat ttgtttgtga aggagaacta aaaaagcata
       61 aaagattaaa agatactttt attaatgtaa gtatatacag caaattttta tgattttatt
      121 tgatacgagg taattaatat gaagaaagtt gagcatcaag aacaatctag agaagtaatc
      181 atcattatta aacaatgatg aacgagattt gtttctttgg attttggagg ttttaaatag
      241 ggaatgtaaa ataaactgtg tagtaaagat ttggtattat gtatctttac tacacagttt
      301 atttctgttt ttactcactt tatgtgttaa ctttatacat ctctatcgtt ttattataca
      361 aggggaaaat gctaaatcct agatgtgcaa atcaaaaatt aggctttcgt tccttgagag
      421 aatttggttg actctaagtg tattaatttt aacgattatc gattttttct ggatacatgt
      481 catgattcat gaggcgatgt tctgccattt tttcgtattt cgaatttgga cgaccgtagt
      541 tagtgtatgg atcgattgaa atgccgccac gtggtgtgaa cttgccccat acttcaatgt
      601 agtgcggatc cattaactca attaagtcat tcataataat attcatacag tcttcatgga
      661 aatcgccatg gttacggaaa ctgaataaat aaagttttaa tgatttagat tcgaccattt
      721 taacatttgg aatatatgaa atgtaaatgg ttgcaaaatc aggttgtcct gtaattgggc
      781 ataaagatgt gaactcagga cagttaaatt taacaaagta atcgcgattt tggtgtttat
      841 tatcaaatgt ttctaaaaca tctggtcgat aatcaaagtt gtaagtgttg ttttggttgc
      901 cgagaagtgt aatatcttgt aattcgtctt ttgaacgtcc ttctgtcatg aggaaggcct
      961 cctttatatt attttgatgg ttgttgacga tgcttagaac ttgtcgagcg tcgtgctttt
     1021 tcgaacatat aatagcttgc acttaaaata atgatataac cgataatggc ataaaagtca
     1081 ggtgattcat taaataagat aaagccgata attgctgtaa atataataga cgcataagta
     1141 aatatcgaaa tatctttggc tggtgcgtaa ctatatgcga ctgtaatacc gatttggcct
     1201 actgcagcgg acaaacctgc taaaatcaag taaacgattt ggattaagct catcggttca
     1261 aatgtaaatg cgacgaatgg tatcagcaca ataaccgaaa agaatgagaa ataaaataca
     1321 atcgtgtatg gggcttctcg tgtacttaaa gcacgtacag cggtatatgc tgaagccgcg
     1381 aaaacaccgg ataacaatcc gacaattgcc ggaatcacat cagatgaaaa ttcaggtttg
     1441 acaacgaaaa gcataccgat aattgcgata accattgaag taatttgata tttttgaata
     1501 aattccttta aaaagatgag gcttaacaat atcgtccaaa aaggattcaa cttcatcaaa
     1561 atatcggcat cgcttaatac catgtgatca atcgcataga tgtttaacag gacgcccatt
     1621 aaacctaaaa cagaacgtgt cactaataaa ggttgactac tgagtttacc gaagaagggc
     1681 tgtttatatt taagaataaa gaataacgga ataaacatgg ctacgaaatt tcgagcgagt
     1741 gatttttgaa atacgggtaa atcgccggat agacgaaaaa aaactgccat aaaactaaaa
     1801 ccaatagcag aaattaaaat agcgaggatt cctttcactt tagtattcat gatatcgcct
     1861 cttattgata aaaatttgac ttatacatag tagcacaaaa tgaaacaact tgcattatat
     1921 cttgcaattt tactaaaagg agctacaatt aaagggaaca tacgttctgt ttaagaggtc
     1981 tgtataaacg tttcggttaa gaaagtcaag tgagagatgc acttcaatca gaaaataatt
     2041 ttttcaactc ttctagtagt tgatttcatc gcttttgatg acaatgggtg acaaaagttc
     2101 caatttatct ctttaaattg agaatagagt tctgtataat gagacacata atatagtatg
     2161 gtcgaatgaa aataaacaca atatattgtg tttgatgagc ggataacatc acgagaatgg
     2221 acaaaatcaa tggaggttta cacgattttg aacattctat ttctttgata atctacatat
     2281 agtagttgaa aaatataagt cattattgta cggcgataat ggtatatcat caacttttta
     2341 acttatttta agaatagaga taaagcaaat gtatgttcgc attttattca ataacattta
     2401 tattgtggat gagagaaaag ttacaatgaa cgatacgtga atcatttatc tcggaagaaa
     2461 ggtggttatt caggatgaaa gtagtatttt attcttttac aggtaatgtc agacgattca
     2521 tcaaacgtac agaacttgat aacacactag agattaatga gacgaatact ttagaaaaag
     2581 tgactgagcc attcattatc gtcacaggga ccattggttt tggtgaggta cctcaaccag
     2641 tccagcaatt tttagaatgc aaccatgaaa atttaaaggg tgtcgcagca agtggtaacc
     2701 gaaactgggg gactaacttt gcgaaggcag gtacacggat tgcagaaatg tataacgtcc
     2761 ctttactaat gaaatttgaa ctacatggta atgcacacga tacaatcgaa tttaaagaga
     2821 aggtggtcaa tttttatgaa aactatggaa caaaaacaat acaagcacat tgaacttaat
     2881 aatcaagtga caaaaagaaa tgaaaatggc ttttttcaac ttgaaaaaga tcaagaagca
     2941 cttgcaagtt atttagaaga gattcaagat aaaactgttc attttgatag cgaacttgaa
     3001 cgccttcact ttttagttga caatcatttt tattacaatg tatttgaaga atacagcgaa
     3061 gcgcaacttg ttgaattaat tgcatttgca acagagattc catttcgttt tgctagttat
     3121 atgtcagcaa gcaaattttt taaagactat gcattaaaaa cgaatgataa gtcacaatat
     3181 ctggaagact atcatcaaca tgtaatgata gtgtcatttt atcttgcaaa aggtaatgtt
     3241 gaacttgcta aaaaattgat tcaagcaatg gtagagcaac gttaccaacc agcaacccct
     3301 actttcttga acgcaggtcg tgcgcgtaga ggtgaattag tttcatgttt cttattagaa
     3361 gtagatgaca gtttaaactc tattaatttt attgattcaa ctgctaaaca attgagcaaa
     3421 attggtggcg gggtagctat taacctttcc aaattgcgtg caagaggtga agcgattaaa
     3481 ggcataaaag gtgttgcgaa aggggtttta cctattgcta aagcacttga aggtggtttt
     3541 agctatgctg atcaattagg tcaacgtcca ggtgctgggg cagtgtatct aaatattttc
     3601 cactatgatg tagaagaatt tttagatacg aagaaaatta acgcagatga ggatttgcgt
     3661 ctttcaacga tttcaacagg tctgattgta ccgtctaagt ttttcgaatt ggcgaaagaa
     3721 ggtaaagatt tctttatgtt tgcccctcat acagtagaac aagaatatgg cgtgacttta
     3781 gacgatatta atattgacga gtattatgat cgtcttgtcg aaaatccaaa tatcatgaag
     3841 aaaagtaaag atgcacgtga aatgttaaat atgattgcac aaacgcaatt gcaatctggc
     3901 tacccttatt taatgtttaa agataatgct aaccgtgtgc atgcgaattc taatattggc
     3961 caaattaaaa tgagtaactt atgtacagaa attttccaac ttcaagaaac atctgtgatt
     4021 catgattatg gcgtagatga tgaaatcaaa cgtgatattt cttgtaatct aggttcatta
     4081 aatattgtga atgtcatgga atctaatcag tttagagatt ctgttcatac aggaatggat
     4141 gcattaacag tcgtaagtga cgaagctaat attcaaaatg caccaggcgt caaaaaggcg
     4201 aacagtgaac tccactcagt tgggcttggt gtgatgaatt tgcatggtta tttagctaaa
     4261 aatcatatca gttacgaatc agaagaagcg aaagattttg cagatgtatt tttcatgatg
     4321 atgaattatt attcaattga acgttcgatg caaattgcta aagaacgtgg tgaaacattc
     4381 aaagattttg ataaatcgga ttatgcgagt ggacgctatt ttgaacgcta tacgtctgag
     4441 gactttttac caaagtctga aaaggtaaaa gctctgtttg caaatcacac tattcctaca
     4501 cgtgacgatt ggaaagtatt gcaagctgaa gttgaaaaat atggcttata tcatgcatac
     4561 cgtttagcga ttgcaccaac acaaagtatt tcgtatgtgc aaaatgcgac aagttcggtc
     4621 atgccaattg tcgaccaaat tgagcgacgt acatatggga attcagaaac gttttaccct
     4681 atgccgtttt tatcaccgca aacaatgtgg tattacaaat cagctttcaa tattgatcaa
     4741 atgaagctga tcgatttgat tgcaacgatc caaacgcata ttgaccaagg gatttcaaca
     4801 attctatatg ttaactcaga aatttcaacg cgtgaattgt cacgtttata cgtttatgcg
     4861 catcataaag gtttgaaatc tttatactat acacgtaata aattattgag tgtcgaagaa
     4921 tgtacgagct gtgcgattta attttttaga tttaaaggcg gacctatgat atcacgtagg
     4981 tctagcgatt gaagtgatac ttgtgaggat agcggtgaac aaatggtttt atagtgcagt
     5041 ttactcaact tgggcgaaag tgtgcgacac aaacttttgc ccgactcaca atgttaaaat
     5101 ttatggaatg gggcattggt ttgtcccatt tgtcatacaa tatataaaag ataggagcaa
     5161 agaagtcaat gatagctgta aattggaata cacaagaaga tatgacaaat atgttttggc
     5221 gtcaaaacat cgctcaaatg tgggtggaaa cagaatttaa agtttctaaa gatattgcaa
     5281 gttggaaatc attaactgaa gcagaacaag atacatttaa aaaagcgctt gcaggtttaa
     5341 ctggattaga tacacaccaa gcagacgatg gtatgccttt aatcatgtta catacacaag
     5401 acttgcgtaa aaaagcagtc tattcattca tggggatgat ggaacaaatc catgccaaaa
     5461 gttattcgca catttttact acgttacttc catctaaaga aacagatgaa ttattagatg
     5521 tctgggtatt agaagaacca catttaaagt ataagtctga aaagattgtc ggcacttatc
     5581 ataaattatg gggaaaagaa gcatctattt atgatcaata tatggcacgt gtggcgagtg
     5641 tttttttaga gacattcctc tttttctcag gtttctacta tcctttgtat ttggcaggac
     5701 aaggccgtat gacaacatca ggtgaaatca tccgtaaaat cttactggac gagtcgattc
     5761 atggtgtatt cactggttta gatgcacaaa gtttgagaaa tgaattgtcg gaaagtgaga
     5821 aacaaaaagc ggataaagaa atgtaccaat tattagagga tttatacgcg aatgaggcat
     5881 catatacaag aagtttatac gatccgattg gtttaactga tgatgtgatg aactatgttc
     5941 gttataatgg taacaaagcg ctctccaatc taggttttga accgtatttt gaagaacgcg
     6001 agtttagtcc aatcatcgag aatgcgttag acacttctac taaaaatcac gacttcttct
     6061 cagttaaagg tgatggctat gtacttgcat taaatgttga atctttacaa gatgaagatt
     6121 ttatttttta acgattaaag tgtcaatgaa aggctctatg tcaaatagga ctgatgagca
     6181 taatacagag gttaagcaaa atagcgttgc ttaacctctt ttttagatgg gctataaaaa
     6241 caggatttcc gtgcgttatc tttactcata gggtgtcaaa aaggtaaggc ttctaggaga
     6301 gaaatgaaaa gtaaaaaaag cctgttcatt ttgacgaagg tcgctttgtt gcaatagcta
     6361 cctgtcttct caatgtaagt tttgagaaag cgaggcagcc gtgggagtga ggacttaaag
     6421 ttctagcact acgaatatag catcaaaaga cgattcagaa gataatattt aagatgttta
     6481 aaggttgtta tattacatta taatgaaaaa attaaatttc gaaataatgg tgataatgaa
     6541 acttacaccg gttgttaaaa tgcgcttcac attcaggaca agattcggtc atcatatacg
     6601 tttcaatcgg catctcataa ccacaaacac cacataaaat agcgcgctca tcaaattcat
     6661 ccgaatgcca acgtttcgga cgatgttttt cagattcatt atgacattta aagcaaggat
     6721 aatatttatg acaacattta aacttaattg cgatgacatc aaatggcgta ttgtagtgag
     6781 tacaacgtgt ttcttggtcg acagtcgcac cataaacttt cggcatagca ttcgctcctt
     6841 aaacttttct ttatttctct aaatcttctc caataatccg aacttctctt tctaactcaa
     6901 tcccaaattt ttctttcaca acgttttgga catgatgaat taagttttcg tagtctgtcg
     6961 ctgttccgtg attgacattt accataaatc cagcatgttt acgagagact tcgacgccac
     7021 cgatacgatg cccttgcaag tcagcatttt gaatgagttg acctgcaaaa tgaccaggtg
     7081 gacgacggaa aacactaccg catgatggat attcaagtgg ttgcttggat tcgcgtcgtt
     7141 ctgtgagatc atccattttc tcttgaatgt cttcttgctt cccaggtgtg agtgtaaatg
     7201 cagcttccaa cacgacataa tgctgttgtt ggataatact attacgataa tccaattcaa
     7261 gctcattatg tgttaattta agcaactcgc cacgttcatc gatgacaagt gcataatcga
     7321 tcacatcttt tacttcgccc ccataagcac ctgcattcat ataaacagcg ccaccgatag
     7381 aaccaggaat cccacaggca aattcaagac ctgttaatga aacgtcgcgt gcttttcgag
     7441 acacatcgat tatagccgca ccactgcctg caataattgt cgcatcagaa gtaacgatgt
     7501 gatttaaaga tagtaagctc aatacgattc ctcgaatacc gccgtctcta ataataatat
     7561 ttgaaccatt tcctaaatag gttacaggta tgtcatgttc atacgcatat ttcacgactt
     7621 tttgtacgtc ttcataacgt tcaggtgaaa tataaaaatc cgcattccct ccagtttcag
     7681 tgtaagtata gcgttttaat ggttcatcta ccttaataat acttgcagga atcagttttt
     7741 ctaaatcctg taagatgcta gaatgattca caaataacat cctttctctt cattgtaatc
     7801 catagtgttt ttgccaatta taaatcaatt tttcatattt gatggttttt acaaagtgtg
     7861 tttggtattt ttagacttaa ctatatttta actgttttaa tagaacacgt catgtatgaa
     7921 ctttttatgt tgtgtattgt tgaagttgtt taaaccattg cttttttaag ttttcataat
     7981 ctcggattgg catgaatggt tgttcgagag aggctttttg ggctttaaaa aattgaatgg
     8041 ctgctggatg atgcgttaat aattcatgaa attgttggta ttgttggaaa gtaggcgtgt
     8101 gcatttgaat aatatgtaag cggacttctt gctttaattc attcaggtta ttaaattttg
     8161 ccatcacgac tttcttttcg taagcatggt gtaaacgata aaatccagca tagtttagtc
     8221 gcttttcatc taatgacgta atgtcgtgca aattttcaac accgactaaa atatctaaaa
     8281 taggttcagt cggataatta aaatgaaaag taccgccgat atgttgtgtg aacttcaccg
     8341 gtgagtctaa gagatcaaac aaaatgtgtt ggtatttttc gtattgtgtc gcataaaatg
     8401 gctgttgatt ttcagtcata aaaggttgga catgacgata catatggagg cctccttgag
     8461 tgtccttttg cgtaattctg cattactata tcatatatta ttttcaagtt aaatacgttt
     8521 atgtataata cgaattgaat aagaggtgca gcgatgaaaa aatggataaa aataatcatt
     8581 ttaagttttc tgatgattgg cagtcttacc gcatgtatgg catcatctca aaagcagatg
     8641 cacgcattcg atcaacaaat gaagactgtt gcagaaaaag aacgcattgt gaatcgaaca
     8701 ttagaagaaa tgaatttaaa ccaactgtat gatttgagtc aaacaaatac gacagatgcg
     8761 aacaaaaaag catttgaaca atttaaaaag caaatagacg ataaattaaa gccagcgatg
     8821 aaagtgtatc atcaagaggc gaaagcactt cctgaaccaa ataaagattt gaaagcgttg
     8881 aagtctacat atttagaggg cataaagggt aaagaagaga taattgaaaa attggatcag
     8941 tttatcgtac tctgccaaaa ttcaattcgc gcgaatgaaa acatactgga gttcacacaa
     9001 caatttgaaa agcatcgcag tcgtgtagag gcacaaataa gtagtgcgaa acaaacgtca
     9061 caaggcatag aagatagcac aaaattagaa gagcgactcg atgaaaataa tcaccatatc
     9121 aaagagaaag cagagacctc tattcgtgaa aaggatggaa aagcacaaat gcaggcgatt
     9181 caagaggaag tgattccgtt agttcaaaca caaattaaag atttaaatga aatgcaactc
     9241 cgagatgaga tgacgaacca cgcccgacaa aatgcagtgc aaatgtatta tagtcttgag
     9301 cgctattatc aagaacgtct caaaacgatt gactataatc aaaaattagc tcaggcgaat
     9361 attcgtaaac tcattacaaa ggcaaaagat ttggacagct ataacgcacc atacgaaaat
     9421 cagcgtgatc agttgaattc aaactaatgg acgcgcgctg tttcagatgg attgtttcgg
     9481 tagatgggga gcggattcaa aattaaaggt taacaagcct atattatgtg tgtataatgg
     9541 taaacattga gaaaagtact taattaattt agataaaaga caaacagaaa atctacttag
     9601 aggtgaagag aatggcgatt aagctaactt cgattgacca attcgaacaa gtgattgaag
     9661 agaatccata tatctttatt ttaaaacata gcaatacttg tccgatttcg gaaaacgcgt
     9721 tcgatcaatt taataaattt ttatatgagc gtgatatgga tggttactat gtagtagttc
     9781 aagaagcacg tgaactatcg gattatattg ctgaaaagac aggtgtccaa catgaatcac
     9841 ctcaagcgct ttatttcgta aacggtgagg tcaagtggca cgacagtcat aaaaatgtga
     9901 atgtctctga acttgcgaaa gctgaggaat agggtgacat tgtttggtaa tggttgaatc
     9961 gatgtgatga tatgtcatga ttggtatgcc tgaaaagcgt aaccaagcaa tatttgaaaa
    10021 tatatgaaag caacacatgt gataaactag gatgtgttgc tttttatttt gatcaatgac
    10081 ataagcgtga tgagtgcatc gtatcatggg aattaaagcg ctacgtttaa atgagttgtt
    10141 tagttcattt gtacactttt gaaggtcaag gctataatat agaataatga gattagaagt
    10201 tattaacgga tattaaatca ataaagtata tattcaatta gacgagatgt tgaacatcaa
    10261 tatttcagag ataagagggg gactatatga aaatattaat agctatggat gaatttaacc
    10321 atattatttc gagttatgac gcgaatcgct atgtagaaga aggtgtggcg agtcaaattg
    10381 aggatgcaga tattgtacaa gtcccactat ttaatgggag aagagagtta ttaaatgccg
    10441 tctttttgtg gaaatctggg acacaatatc aaattcccgt acacgatgcg gcgatgcaag
    10501 ctgtagacgc cacgtacggt cagacagatg atggcattac cgttatagaa gcggggcaat
    10561 ttttaaaagg gacgttacca cttgtagaac agtcaagcta tggtgtaggt gaagtgatgc
    10621 gtcatgcctt ggataaaaat gcgcaacata tgattatttc agtaggtgct atcgatacat
    10681 ttgatggtgg cgcagggatg ttacaagctt taggtgcaca gttttatgac gatgaagggc
    10741 gtaccgtcga catgacaaaa ggtggcggcc aaattaaaca cgtgcgtcgt attgatctag
    10801 aagatttaca tgaaggtttg aaacagtgtc gaattcagat tgtgacagat tttgagagta
    10861 agctatacgg caaacagagt gcagtcatga agacctatcc aaatcttcaa atcgatcgag
    10921 aagaggcagt ggtgattgat aatttgcttt ggtattggag tgaattgttt aaacatcaac
    10981 atcatatcgt gttaggtacg gttgaaagag gtggtgcagg tggcggtatc gcagcaacgt
    11041 tacatgcatt atttaaagct gaaattcaaa cgagtcatga attagttgat caaattacag
    11101 gattgaatgc attagtgaaa caagcggact tagttgtatt tggtgaaggc atagatgaac
    11161 aagacgaaat gattgaaacg tcttcactaa gaattgctga actctgccaa caatacgata
    11221 agccggctat tgcactatgt ggtacagcgg acaaattcga aagattcgaa gcattaggcg
    11281 tgacagggat gttcaacacg tttatggata tgccgaaaac attaactgac ttcaaaatgg
    11341 ggatacagtt aagaaattat gccgtacaag ccattcgatt gttacggaca tcgtttaatt
    11401 aacgagagga catgaattaa aaaggacaga gactgggaat gtttgaaaaa gttctcagtc
    11461 tctgtccttt tgtgggatta tatccattta tcgtttaaca gacattgatg atatcaccat
    11521 caaacacttt tatttcttgc tctttttaca aggcttactt ttctgctact ttttggacga
    11581 tgcctaagat gacttgtacc gcttgtgcca tgacatcgat agaagcatat tcataagggc
    11641 cgtggaagtt atcgcagcca gtaaataagt tcggtgtcgg taaccccata aatgaaagtt
    11701 gtgaaccatc tgtgccgcca cgaatcggtt cggtgttcgg tgtgatatta aggtcagcat
    11761 aaaccgcttt tggaatgtcg ataatatgtt gcagcggctt aattttttct gccatgttgc
    11821 gatattgatc attgattacg agatgtacag ggtcataata ataacgtgca ttgatgtctt
    11881 tttgaatttc aataagttgt tgttttcggt tttcaaaaga agtactgtca tggtcacgaa
    11941 tgatgtattg tgcagtcgct ttttcaacgt taccattcaa ttccatgagg tggaagaagc
    12001 cttcgtaacc ttccgtatgc tctggaactt cattgacagg taatgcttga tgaaacgtat
    12061 tggctaaatt cagtgcatta accattttat ctttagcaga acctggatgc acattcacac
    12121 cattaaacgt aatttttgct tctgcggcgt taaaactttc aaactgtaat tcacctaatt
    12181 ggctgccatc cattgtatac gcgaaatctg catcaaaacg ttcaacgtcg aatttgtgag
    12241 gaccgcgacc gatttcttca tcaggggtaa agccaacacg aatatggcca tgtttaattt
    12301 ctggatgtgc aatcaaatat tggagtgctt ccataatttc gacaacacct gctttatcat
    12361 cggcaccaag taaggaagta ccgtctgttg tcattaatgt atgccctttg actttgagga
    12421 tatctggaaa gacttcggga ttaatttcac ggccagaagt acctaaagtg atgacaccgc
    12481 cgtcatagtt gtctatcatt tgtggattta catttgcggc gttgaaatca ggtgatgtat
    12541 ctacgtgcgc taaaaacccg attgtaggtg cctctgtttc aatattcgct tctaatgtgg
    12601 cgaataggta accgtgacga tctaaatcgg tatcaagccc catcgctttt aattcgcttt
    12661 ctaaaagatg aagcaaatcc cattgacgct cagttgaagg ggttgtctcg ctattcggat
    12721 cagattgtgt attaatttta acgtaacgtg aaagtctttc gataatttgt tctttcatac
    12781 ttaacactcc tttttatcta cttagatacg gttattcata tggtatcctt tacgataatg
    12841 ctttccttta agtttaccat aggcatgttt aagtcgtgta tagatgtagt agaagatttc
    12901 ggcacaaaga attccgaatg cgatggcacc tgatgttaaa gtgacctcta aaaattgatt
    12961 tactgcaggt gtataagcat ttgttacgag taaacgggtt gcttcatatg ctgcaccccc
    13021 aggcactaat ggaatgatac ccggtacaat gaaaataatg acagggcgct tgtaacgacg
    13081 gctcatcgta tgactcatca tcgcaaggat aaaacttcct aaaaaagcag ccatgacaat
    13141 cccatagttc atatcaactg taaatttata aatggaccaa cccatggcac ctacaaagcc
    13201 tgatgcgagt aaaaggcgtt tcggcgcatt gaaaatgatt gaaaatagca tcgtcgaaac
    13261 aaagctgatt aaaaactgcg caatataata aaaaatataa gtcaatgtcc tcacaccttt
    13321 ctagaaaata agtaatacaa tcgcaacgcc ggcaccaatc gcaaatgcag tgagggcagc
    13381 ttctacaccc cgtgacatac ctgctaaaag ttcacccgcc attaaatcac gaatggcatt
    13441 ggtaattaaa attcctggta caagtggcat gacgccggca atggtaataa tatcttgatt
    13501 ggtagcccaa ccgtttttag tgaaaaaggc ggccactgta attacaactg tagcactaat
    13561 gaattccgag aaaaatttaa tttgaataaa gcgctggact aagtcgaatg ttaaaaatgc
    13621 agcgccacca gcaataacgg cataaataaa atcatgtcga acgccgccga acataaataa
    13681 aaagaaacca catgcgatag atgcagctaa aaacttaatg ataaatgaat actgtaatga
    13741 agcgtgctct agatgaatca gttccgcttt tgcttcgtcc aacgttaatg tattacgcga
    13801 aatcttcctt gaaatattgt tagcgagtgc aatcttttct aggtccgtcg tccgttcacg
    13861 cacccgaaca agacgagtat tcgttcgatc gttcagtgaa aaaataatcg ctgttgatgt
    13921 gacaaaggcg tatgtatctt ctagaccaaa actcgctgca atacggccca ttgtatcttc
    13981 tacacgatag gtttctgcgc cactttctaa taaaacttta ccagcaagta ggacgacatc
    14041 aatgactttg ttttcatcaa taatcgtgag tgcttctgcc atggctgtgt ctcctttcat
    14101 ttcaatcaat agtcagtcta catgggaata ataccacttg caatagttaa tacttagttt
    14161 ttatgaaagt tttaaaaatg tgatttggca aatgactgaa aataaagtgg ggggaggaaa
    14221 tgctatttta ttttgggaca aagatgtcag aaagctattc ctatgttaag tcaaggttgc
    14281 tgaacgattt ctccctttcc caagggactt gcctcaacta aatccggctt gattgaagta
    14341 tactttagat ggaaggcgaa ttggattttc ggctgtgcct ttatctttcg agggtgtcga
    14401 atggttcttg caaactttaa aaaatggtgc ttccatacat gggtgtcaca cgttatttat
    14461 acattaatga gtgggtggtt agaacgctat cccaggcctt aaaaccaagc aaatattgaa
    14521 tcaaagcata tcaaaaagcc acctctctgt tgtgtcagta aggtggcttt aatgtattat
    14581 tttgggttaa taatagggct gaacatcact tggttacgcc cttcgttttt cgcgacatgt
    14641 aacatatcat cagcatcttt aaataatttg cgttgtgatt tatgactttc atgcgtcatg
    14701 taaccgacac caatagaaac ggagagttta ataacaattt tgtctggcaa atggaagttt
    14761 gatttttcca cagctttacg aatactttca gcaagtttga cacattcatc taaagagcaa
    14821 tcacgtaaga caatcgaaaa ttcttcgccg ccgtttcgga aaatgcgtgt ttttttaggc
    14881 acatagtttt gtaaaaggtg agacatttgt tttaatacgg catcacctgc atgatgtgtg
    14941 taagcatcgt tcacatcttt aaagccatca atatcaatta atagtaacgc taaactttgt
    15001 tgttcatttt ctgcaacacg tgccatctcg tttaaatgac ggtcaaattc ttttacattg
    15061 cctaaaccgg ttaagtaatc aacagtatct tcattctcgt aacgttcgat gagtgagaag
    15121 aatctgagca agtcgacgta aaatacggct gttactaatg ttgcaaccat tgaaataggg
    15181 attaaataga gcacttctac ggtatcaaat gatggcataa tcattgcaat aatcgttaaa
    15241 ataataatgc ttaaaatatt taagatttgg atcgaaacga catgattttg cttgagaaat
    15301 ggcccaattg tacttacaat agctgcaatg actaacaacg acacagcata agttaatgtc
    15361 gtcgataata caaagtaacc gaccaacgca ataatgactg ctgcgaagac tgtgtaaaaa
    15421 gaatttgtat atcggcctaa aaagagtaaa gggacaaaag aaagttgaat catatagttt
    15481 tcgattggaa taggttgaaa tgcaagtaac aatccaacga tagtcatcaa tacggtaata
    15541 taactttttg aaaatctaaa gtcatgagat tcagcgtact gaagacgatg aaataaatat
    15601 attccagcga t
//
LOCUS       DANHPA010000063        15400 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.063, whole genome shotgun sequence.
ACCESSION   DANHPA010000063 DANHPA010000000
VERSION     DANHPA010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 15400)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15400)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15400
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.063"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(194..1216)
                     /gene="tsaD"
                     /locus_tag="PTC28_001548"
     CDS             complement(194..1216)
                     /gene="tsaD"
                     /locus_tag="PTC28_001548"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HDK5716832.1"
                     /translation="MNEQTKILALETSCDETSVSVIENGQTILSNSVLSQIESHQRFG
                     GVVPEVASRHHVENITVMIEEALQQAHTSIEDVDAVAVTQGPGLIGALLVGVNAAKAL
                     AFANDKPLIPVHHIAGHVYANQLQSGLKFPLIALIVSGGHTELVYMENHLQFEVIGET
                     RDDAVGEAYDKVARKIGLPYPGGPAIDRLAAQGEDTYDFPRVWLEPDSYDFSFSGLKS
                     AVINKLHQLEQKGDPIIPENVATSFQNSVVEVLVGKAIRACEAYGVKQLIVAGGVASN
                     RGLRHALEVATAEKGIELAIPEPKLCTDNAAMIGAAAHEIYLKGIRGDMALNGQSSMD
                     IEMYRD"
     gene            complement(1209..1634)
                     /gene="rimI"
                     /locus_tag="PTC28_001549"
     CDS             complement(1209..1634)
                     /gene="rimI"
                     /locus_tag="PTC28_001549"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002482770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HDK5716833.1"
                     /translation="MSHEDVPEVFDLEQASFQHSSWTIDAFYYELEQNNFAHYFVLEY
                     DQRIIGYLGLWVVVDQAQVTTIAIDAAYQGHGLGQMLLKYGMNYVGSIATVMSLEVRV
                     DNVVAQHVYRKLGFQFGGKRKNYYGDGEDALVMWVNLYE"
     gene            complement(1658..2314)
                     /gene="tsaB"
                     /locus_tag="PTC28_001550"
     CDS             complement(1658..2314)
                     /gene="tsaB"
                     /locus_tag="PTC28_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HDK5716834.1"
                     /translation="MYSLLIDSANQPLSVAIMQEGHVLITHTTTIKRNHSVQLMPLIE
                     WLLQQAQLKPKDLDEIIVTEGPGSYTGLRIGVTTAKTLAYTLNIRLYGVSSLKAIAAQ
                     IQYSDAYIIPVINARRQHVYAGVYQWQQGELVNVMVDQYTPLDRLIEQWTTNDNVIFV
                     GEDVAQFETELAPFKRLSAPPRADQMYPHKGAPRDIHTFTPQYLKLSEAEQNWLNQQK
                     "
     gene            complement(2295..2753)
                     /gene="tsaE"
                     /locus_tag="PTC28_001551"
     CDS             complement(2295..2753)
                     /gene="tsaE"
                     /locus_tag="PTC28_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HDK5716835.1"
                     /translation="MRIKNKTAMQAFANQLATYLKAQDVLLLDGDLGAGKTTLSQFIG
                     QALGVKRPISSPTFNIIKSYRGTHLKFHHMDCYRLEDSDEDLGFDEFFEDEAVTVVEW
                     SQFIQDYLPPHYLKINIQTMNETERELSFEAHGSHFEEIKEAIEHVQFTD"
     gene            3297..4985
                     /gene="ilvD"
                     /locus_tag="PTC28_001552"
     CDS             3297..4985
                     /gene="ilvD"
                     /locus_tag="PTC28_001552"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HDK5716836.1"
                     /translation="MRSDMIKKGDHQAPARSLLHATGQIKSPTDMDKPFIAICNSYID
                     IVPGHVHLRELGDIAKEAIREAGGVPFEFNTIGVDDGIAMGHIGMRYSLPSREIIADA
                     AETVINAHWFDGVFYIPNCDKITPGMLMAAMRTNVPAIFCSGGPMKAGLSAQGKALTL
                     SSMFEAVGAFKEGAMTKEEFLDMEQNACPTCGSCSGMFTANSMNCLMEVLGLALPYNG
                     TALAVSDQRREMIRAAAKQLVENVKNDLKPRDIVTKEAIDDAFALDMAMGGSTNTVLH
                     TLAIAKEAGIDYDLTRINEIAKKTPYLSKIAPSSSYSMDDVHQAGGVPAIINELMKKE
                     GVLHPDRITVTGKTLRENNQDKAITNDVVIRRLDNPYDQQGGLSILYGNIAPDGAVIK
                     VGGVDPSIKTFKGKAICFDSHDEAVEAIDNHTVRAGHVVVIRYEGPKGGPGMPEMLAP
                     TSSIVGRGLGKDVALITDGRFSGATRGIAVGHISPEAAAGGPIGLIEDGDDITIDLVN
                     RDLTLHVDDVVLAERQAHRQPFKAKVKTGYLARYTALVTSANTGGVMQVPEDLL"
     gene            5006..6760
                     /gene="ilvB"
                     /locus_tag="PTC28_001553"
     CDS             5006..6760
                     /gene="ilvB"
                     /locus_tag="PTC28_001553"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HDK5716837.1"
                     /translation="MTQTHHTVPQNHNESEETTLQPDTNALKSGAQLLVDAFLEEGVE
                     YIFGYPGGAVLPLYDTFYNEQIKHILYRHEQGATHAAEGYARVSGKPGVVVVTSGPGA
                     TNAITGIADAYSDSLPLIVITGQVATPGIGKDAFQEADILSMTTPITKHNYQVNDVKE
                     IPRIIKEAFHVANSGRKGPVVIDFPKDMGILSTDSPVDNTVNTPGYYVNTKPDIDEIQ
                     KLNDYLKTSERPVILAGAGIHFSKSNSQLRQLVDKYQIPVVTTLHGLGAIPYDDPHFL
                     GMGGMHGSYASNMALTECDLLINFGSRFDDRLASNPDEFAPNATIVHVDIDPSEIDKI
                     IKTDLGIVADVKDVIEALLKYDTEKINHDAWLTTIKGYQDKHPFKYVDDPLEKFCKPQ
                     RAIEYIGEITQGKAYVATDVGQHQMWVAQFYPFQTYGQLITSGGLGTMGFGIPAAIGA
                     KFAKPNETVVAFVGDGGFQMTNQEMALLNEFNLNIKIVLINNGTLGMVKQWQDKFFNQ
                     RFSHSVFNDQPDFMKMSEAYGVKGFLIDDPKCLEAQIDAAFLHNGPALIEIRISPVEP
                     VLPMVPSGKANHEMEGLL"
     gene            6757..7230
                     /gene="ilvN"
                     /locus_tag="PTC28_001554"
     CDS             6757..7230
                     /gene="ilvN"
                     /locus_tag="PTC28_001554"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HDK5716838.1"
                     /translation="MRRTFKLRVFDKAGTLNRLTSLFVRRQINIVSITATPTLDEGIS
                     EITFIAEVPDDEKQRTIIQQLIKQVNTLTVEDITNINTFNRELLLIKLKKPIPQQQFD
                     KVLQPYDALVSILKENGQYLYLQATGPQYTLNHLLDDLSSFHIEQVARTGTAGII"
     gene            7265..8269
                     /gene="ilvC"
                     /locus_tag="PTC28_001555"
     CDS             7265..8269
                     /gene="ilvC"
                     /locus_tag="PTC28_001555"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HDK5716839.1"
                     /translation="MTKVYYDSSVEKDVLQGKKIAVIGYGSQGHAHAQNLKDNGYDVV
                     IGIRPGRSFDQAEEDGFNVYTVAEAVKQADVVMVLLPDEIQGDVYKNEIEPNLEAGNA
                     LAFAHGFNIQFNVIQPPSDVDVFLVAPKGPGHLVRRTFVEGSAVPALFAVQQDASGEA
                     RDLALSYAKGIGSTRAGVLETSFKEETETDLFGEQAVLCGGVTRLIQSGFEVLVEAGY
                     QPEIAYFEVLHEMKLIVDLMYEGGLENMRYSISNTAEFGDYVSGPRVITEETKENMKA
                     VLKDIQDGTFSTRFIKDNEDGFKSFKQMREAQQGHQITAVGQSLREMMPFIKSKSIQK
                     "
     gene            8291..9823
                     /locus_tag="PTC28_001556"
     CDS             8291..9823
                     /locus_tag="PTC28_001556"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HDK5716840.1"
                     /translation="MSSHIQIFDTTLRDGEQTPGVSFSFEERLKLAEQLEKWGVDVIE
                     AGFPASSQGSFESVQAIARTLKHTTVTGLARCLKSDIDAVYEATKDAVSPSIHVFIAT
                     SPIHLESKLHMTEAEVLEAITTHVSYAKERFDIVQFSPEDATRTPLPFLIQSVQTAVD
                     AGATVINIPDTVGYTYPTEYGNIFKALTEKIKSEVPITYSAHCHDDLGLAVANSMAAI
                     ENGATRIEGTVNGIGERAGNTALEEVVLGLYVRQDHYQIQTQIQLELTKQTSDMVARY
                     AGLRVPRNKAIVGKNAFSHESGIHQDGFLKNPETYEIMTPKLVGVKKTELPLGKLSGK
                     HAFQDKLKQLGYDIDLEEQKVLFKAFKGIADKKKHVTDQDIHALIQNSEHDKHVAYHL
                     ETLQLQFVSNGLQSAVVVVRDNNDQHYQDSSIGTGSIVAIYNAVDRIFNVESVLLDYR
                     IDAVSEGRDAQAEVHVQVEVNGQEYVGVGFDHDILYASCKAYVEAISKSVQSIQKEGV
                     AQ"
     gene            9820..10869
                     /gene="leuB"
                     /locus_tag="PTC28_001557"
     CDS             9820..10869
                     /gene="leuB"
                     /locus_tag="PTC28_001557"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HDK5716841.1"
                     /translation="MTFKIVALPGDGIGPEIMSGTLDCLDALASQVDFDYTVDSYAMG
                     GCAIDQYGTPLPDATLDACQRADAILLGAIGGPQWTNPQCRPEQGLLNLRKALNLYAN
                     IRPTRVTTDMAYLSPLKQSIVENTDLVIVRELTSGIYFGEPRYLKDDEARDSMTYTKE
                     EIIRIAHVGFQLAQSRRQKLTSVDKENVLASSQLWRRTVNEVAEQYPDVTVEHLLVDA
                     CSMHLIKRPADFDVIITENLFGDILSDEASMLPGSLGLSPSASFSEGGPKLYEPIHGS
                     APDIAGQNKANPFGMLLSLAMCLRESAERDDMATIIETTVDTLIAKGITTADLGGQYG
                     TTDIFKHFKAFIKGA"
     gene            10873..12246
                     /gene="leuC"
                     /locus_tag="PTC28_001558"
     CDS             10873..12246
                     /gene="leuC"
                     /locus_tag="PTC28_001558"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HDK5716842.1"
                     /translation="MGRTLFDKIWDQHTITGQQGEPQLLYIDLHLIHEVTSPQAFEGL
                     RMQKRTLRRPDLTFGTLDHNVPTVDIFNIKDDIANKQIQALQQNCKDFNVTLFDMGSD
                     EQGIVHMVGPEMGLTQPGKTIVCGDSHTATHGAFGAIAFGIGTSEVEHVFATQTLWQT
                     KPKNLKINVTGQLPKGVYAKDIILHLINQHGVDFGTGYALEFAGETIRNLSMEGRMTI
                     CNMAIEAGAKYGLIQPDNTTFAYLEGRRYAQNIEDKLDDWRKLYSDDDAQFDKIIELD
                     VTALEPQVTWGTSPEMGVSFSTPFPEIQNVNDERAYQYMGLKPGQLATDIPLGYVFLG
                     SCTNARISDLVEASHIVKGNQVHENITAIVVPGSRQVKKEAEAMGLDTIFKDAGFEWR
                     EPGCSMCLGMNPDQVPAGVHCASTSNRNFEGRQGKGARTHLVSPAMAAAAAIHGRFVD
                     VRKVVEA"
     gene            12246..12818
                     /gene="leuD"
                     /locus_tag="PTC28_001559"
     CDS             12246..12818
                     /gene="leuD"
                     /locus_tag="PTC28_001559"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HDK5716843.1"
                     /translation="MEIKAITQYSGKTVPLFHDNIDTDQIIPKVHLKRISKTGYGPFL
                     FDEWRYLEDGSDNPNFVLNQPEYEGASILITGDNFGCGSSREHAAWALKDFGFQVIIA
                     ESFSDIFYMNCTKNALLPIRLDRASREAIARYPEITIDLPQQIIQTPEQNYHFDIDET
                     WKEKLVNGLDDIAITLKYEALIKDYELKHT"
     gene            12831..14099
                     /gene="ilvA"
                     /locus_tag="PTC28_001560"
     CDS             12831..14099
                     /gene="ilvA"
                     /locus_tag="PTC28_001560"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase IlvA"
                     /protein_id="HDK5716844.1"
                     /translation="MSVKTTPVQAQDVEDAFLRLNTIVKETPLEKDHYLSLKYDCNVY
                     LKREDLQWVRSFKLRGAYNAIAVLPEEKRNQGITCASAGNHAQGVAFTAKYLNLHAVI
                     FMPVTTPKQKVNQVQFFGGDNVEIKLEGDTFDDCLKSALSYTEQHDMTFIDPFNNVHT
                     IAGQGTLAKEMIEAAKTDNITIDYVFGAIGGGGLMSGVATYFKAHSPSTKLIGVEPLG
                     ASSMYQSVQAGEVVTLDNIDKFVDGASVARVGEITFNICRKALDDYVQIDEGAVCSTI
                     LDMYSKQAIVAEPAGALSVSALEQYQDQIKGKNVVCIVSGGNNDINRMKEIEERSLLY
                     EEMKHYFILNFPQRPGALRQFVNDVLGPHDDITKFEYLKKSSQNTGTVIIGIQLQNRA
                     DLDTLIRNVNQFDPKNIYINENKMLYSLLI"
     gene            complement(14169..15314)
                     /locus_tag="PTC28_001561"
     CDS             complement(14169..15314)
                     /locus_tag="PTC28_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5716845.1"
                     /translation="MSTIGSSVFSFACAFHILKNTENSYLYSIYLTLIVITTILSTPI
                     SGVFIDSVNNKRLILYSQLSSVAALIIFSLLYDDNVYMIICLGLLLTVPDGINSVIIQ
                     KNLQRIVTDNLERVISIRQTVSTLTSFVSPIIGGIVIAFIPLQVIGMMNMLTKAISII
                     LIQSLPIINHQQMKSQFVHSFKEGVQYLVKKKEIMTFLVCAMLNNFLINVIVVGVPII
                     AIQQLHLKSTQFGMIESGYTIALFLVSFVMSIYPVKRGVTLFYKIGILIEIVTLFSLG
                     VFLLYPHQNLTSFIFLIATYMLIGVSLPIINTPYGVYLQKAVEDEYKGRVFSLNSSIA
                     QAIIPVSLSFFGFILNDNAAQVFMIDAILMLVVLTGFSIAMRKYQFD"
BASE COUNT         4830 a         3055 c         3134 g         4381 t
ORIGIN      
        1 aagtgaaaat tggacggtct agttcagtaa tgtcaatttc acttattgaa cccttgacaa
       61 atcgtaggaa aagggactgg gaaaaccaaa tatcccaatc ccttttgatt aaattttgtt
      121 agaaagcgca gaatggttca gcaatctcca tgaatctctg cataattgaa atattcaaga
      181 cctacttaac aacttaatct cggtacatct cgatatccat actactttga ccgttcaacg
      241 ccatatctcc acgaattcct tttaaataaa tttcatgcgc tgctgcacca atcatcgccg
      301 cattatcagt acataatttg ggctctggaa ttgcaagctc tatccctttc tcagcagttg
      361 cgacttctaa cgcatgacgt aaacctcgat tacttgcaac accaccagca acgatgagtt
      421 gtttgacacc atacgcttca catgcacgta ttgcttttcc tacgagcact tcaacaacac
      481 tattttggaa gcttgttgcg acattttctg gaataatcgg atcacctttt tgttctaatt
      541 gatgtaattt attaatgact gcactcttta aaccactaaa actaaagtca tagctatccg
      601 gttctaacca cactcgtgga aagtcgtacg tgtcttcccc ttgagcggca agtcggtcaa
      661 tggcagggcc acctggatat ggtaagccaa ttttacgtgc aactttatca tacgcttcac
      721 caactgcatc gtcacgtgtt tcccctatca cttcaaattg caaatgattt tccatgtaga
      781 caagctctgt atgaccacct gaaacaatta aggcaatcaa tgggaatttc aagccacttt
      841 gaagttgatt ggcataaaca tgaccggcaa tatgatggac tggaatgagc ggcttatcat
      901 tcgcaaaagc cagtgccttc gcagcattca caccaacgag taacgcccca atcagtccag
      961 gtccttgtgt aaccgcgaca gcatccacat cttcaattga tgtatgggcc tgttgtaacg
     1021 cttcttcaat catgaccgta atgttttcaa cgtgatgacg actcgccact tctggaacga
     1081 ctcctccaaa acgttgatga ctctcaattt ggcttaatac gctgttactt aaaatcgttt
     1141 gaccattttc aatgacactc acacttgttt cgtcacaact cgtttcaagt gcaagaatct
     1201 ttgtttgttc attcatataa attcacccac atgactaatg catcctctcc atcaccataa
     1261 taattttttc gtttgcctcc aaattggaaa ccgagctttc gatacacatg ttgtgcaacg
     1321 acattatcga cacgtacttc taaactcatc actgtcgcta tagaccccac atagttcatc
     1381 ccatatttta atagcatttg tcctagtcca tgaccttgat aggctgcatc tatcgcaata
     1441 gttgtcactt gtgcttgatc aaccacgacc cataatccta agtaaccgat aatgcgttgg
     1501 tcatattcga gcacgaaata atgtgcaaag ttattttgtt ccagttcata ataaaaggca
     1561 tcaatcgtcc atgaactatg ttgaaaactc gcctgctcta ggtcaaacac ttcaggcaca
     1621 tcttcatggg acatacgtct aatttgaagc tgatcttcta tttttgttga ttcagccaat
     1681 tttgttccgc ctccgatagt tttaaatatt gcggtgtaaa ggtatgaata tcgcgtggcg
     1741 ctcctttatg tgggtacatt tgatccgctc gagggggcgc acttaatcgt ttaaagggtg
     1801 ctaattccgt ttcaaattgt gccacatctt cacctacaaa gataacgttg tcgtttgttg
     1861 tccattgctc aattaaccta tcgagtggtg tatattgatc caccatcaca ttaacaagtt
     1921 caccttgttg ccattgataa acaccggcat aaacgtgttg tcgtctcgca ttgatgactg
     1981 gaataatata cgcatcagaa tattgaattt gtgctgcaat cgcttttaac gatgacacac
     2041 catacaatcg aatattcaat gtgtaagcaa gtgttttcgc tgtcgtcacc ccgatacgca
     2101 atcctgtata cgaacctgga ccttctgtaa caataatttc atctaaatct ttcggcttca
     2161 attgtgcttg ttgtaataac cattcaatga gtggcatgag ctgcaccgag tgattacgtt
     2221 ttatcgttgt cgtatgcgtt atcaatacgt gaccctcttg cataatcgct actgataatg
     2281 gctgattggc actatcaatc agtaaactgt acatgttcga tggcctcctt tatctcttca
     2341 aaatgtgagc catgtgcttc aaaactcagc tctcgttctg tttcgttcat cgtttgaatg
     2401 ttgattttca aataatgtgg tggcaaatag tcttgaataa attgactcca ttccacaaca
     2461 gtcaccgctt catcctcaaa aaactcatca aatcctaagt cttcatcaga atcttctaat
     2521 cgataacaat ccatgtgatg aaatttcaaa tgggtacctc gatatgattt gataatatta
     2581 aaagtcggtg aactgatagg acgttttaca cctaacgcct gtccgataaa ttgacttaaa
     2641 gttgtttttc cagcacctag gtcgccatct aataacaata catcttgtgc tttgagataa
     2701 gttgcaagtt gattcgcaaa tgcttgcatc gctgttttgt ttttaattct catttcgttc
     2761 gcactcctga ctcgattttc taacctattg taacaaattt ttatcatttt gaccttatca
     2821 acttactgga acatttaaag ctcaccacta atggaatttt tcgcttcacc gcgcacctaa
     2881 aatattttca gaattttttt gatttactgt tgacttattt tctaatataa ggtaaattaa
     2941 tgacatctaa tttttagaca attctttcta ttcttaacat taaagtgcgt ttaatgttaa
     3001 ttcacacatc taatcgtcta cattgtatac gagatgaaca gttaacgatg tagcgagttt
     3061 gacccattca cgacagaaaa ggagcgtatg tacaatgaaa agacatacaa tgatgaccca
     3121 tactgtacaa aatcataata ttatcatttt attattacgc tcaggactgg agctttagta
     3181 gcaatattac taaacgctta agtcctattt ctagttgaat gggacttaca aggtacgtcc
     3241 cagattcaat tttggggcgt acctttttta tttgaaaaac cgaggaggca tttgagatga
     3301 gaagtgacat gattaaaaaa ggagatcacc aagcaccggc gaggagtttg ttacatgcaa
     3361 caggtcaaat aaaatcccct actgacatgg acaaaccatt tatcgcaatt tgtaattctt
     3421 atattgatat cgttccggga cacgtgcatt tacgcgaact tggcgatatc gcgaaagagg
     3481 ctattcgtga agcaggcggt gtcccatttg aatttaatac gattggtgtg gatgatggta
     3541 tcgcgatggg ccatatcggg atgcgttatt cattaccgag tcgtgaaatt attgcagatg
     3601 cggctgaaac cgtcattaat gcacactggt ttgatggggt tttttacatt ccgaactgtg
     3661 acaaaattac accagggatg ttgatggccg cgatgagaac gaacgtccct gcgatattct
     3721 gttctggtgg tccaatgaaa gccggtctgt cagctcaagg aaaagcactc actctctcat
     3781 ctatgtttga agcagttggt gcatttaaag aaggcgcgat gactaaagag gaatttttag
     3841 atatggaaca aaatgcatgt ccgacttgtg gttcttgttc aggcatgttc acagcgaact
     3901 cgatgaactg cttaatggaa gtattaggtt tagccctacc atacaacggg acagcactag
     3961 cagtcagtga tcaacgtcgt gaaatgattc gtgccgctgc gaaacaactt gttgaaaatg
     4021 ttaaaaatga cttaaaaccg cgtgatatcg taacaaaaga agcaattgac gacgcatttg
     4081 cattagatat ggcgatgggt ggttctacaa atactgtact gcacacactt gccatcgcta
     4141 aagaagcagg cattgattat gatttaacac gtattaatga aattgcgaaa aagacacctt
     4201 atttatctaa aattgctcca agttcatctt attctatgga tgatgtccat caagcgggcg
     4261 gtgtcccggc catcattaat gaactgatga aaaaagaagg tgtacttcat ccagatcgta
     4321 tcactgttac tggtaaaact ttaagagaaa ataaccaaga taaagcaatt acgaatgatg
     4381 tcgtgattcg tcgtttagac aatccatacg atcaacaagg tgggctgtca attctttacg
     4441 gtaatattgc tccagatggt gcggtgatta aagtcggtgg tgttgatccg tctattaaga
     4501 cttttaaagg gaaagcgatt tgttttgaca gtcatgatga agcggttgaa gcgattgata
     4561 accatacggt gcgtgctgga catgtcgttg tcattcgcta tgaaggtcct aaaggtggac
     4621 caggcatgcc agaaatgtta gcccctactt catctatcgt cggacgcggt cttgggaaag
     4681 atgttgcatt gattacagat ggccgatttt caggtgccac aagaggtatt gcagtcggtc
     4741 acatttcacc agaagccgct gcaggaggtc caatcggctt aattgaagat ggtgatgaca
     4801 ttacgattga tcttgtgaat cgcgacctca ctttacatgt tgatgacgtg gtactcgcag
     4861 aacgtcaagc acatcgtcaa ccattcaaag cgaaagtgaa aacgggttat ctcgcacgtt
     4921 atacagcatt agtgacaagc gccaatacag gtggcgtaat gcaagttcct gaagacttac
     4981 tttaataaaa atggaggggt tccaaatgac gcaaactcat catactgtgc cacaaaatca
     5041 caatgagtca gaagaaacaa cactgcaacc tgatacgaac gctttaaagt ctggtgcaca
     5101 attgttagtc gatgcatttt tagaagaagg cgttgagtac atattcggtt atcctggcgg
     5161 ggctgtactc cccctttacg acacatttta caacgagcaa atcaagcata ttctctaccg
     5221 tcatgaacaa ggtgcaaccc atgcggcaga aggttatgcg cgcgtaagtg gtaagccagg
     5281 tgtcgtagtc gtaacgagtg gtcctggagc aacgaatgcg attacaggca ttgcagatgc
     5341 atacagtgat tcgctgccac tcatcgttat aactggtcaa gtggcgacac caggcattgg
     5401 taaagacgct ttccaagaag cagacatttt atcaatgaca acgccgatta cgaaacataa
     5461 ttatcaagtc aacgatgtga aagaaattcc gcgcattatt aaagaagctt ttcatgtcgc
     5521 aaattctggt cgtaaaggac cggtagtgat tgattttccg aaagatatgg gcattttatc
     5581 aacagattca cccgtcgata atacagtcaa tacacctggc tattacgtca atacaaagcc
     5641 tgacattgat gaaattcaaa aactgaatga ttatttaaaa acgtcagagc gccctgtcat
     5701 tttagctggt gcggggattc atttctctaa atcgaattcg caattacggc agttagtcga
     5761 caaatatcaa attcctgtcg tgacgacgct tcacggttta ggtgcgattc cttatgatga
     5821 cccccacttc ttaggtatgg gtggcatgca cggttcctat gcaagtaata tggcattgac
     5881 ggaatgtgac ttactcatta actttggctc gcgatttgat gaccgtttag caagtaatcc
     5941 agatgaattt gcgccaaatg caaccattgt acatgtcgat attgacccgt cagaaatcga
     6001 caaaatcatt aaaactgacc ttggtattgt agcagatgtt aaagatgtga ttgaagcgtt
     6061 attaaaatat gatacggaaa aaatcaatca cgatgcatgg ctaacaacga ttaaaggcta
     6121 tcaagacaaa catccattca aatatgtcga tgatccgctt gaaaagtttt gtaagcccca
     6181 acgtgcaatt gaatacattg gtgaaattac acaaggtaaa gcttatgtag caacagatgt
     6241 cggccaacac caaatgtggg tggctcagtt ctaccctttc caaacgtacg gtcaactgat
     6301 tacaagtggt ggactcggaa caatgggatt cggtatccca gccgctatcg gtgcaaaatt
     6361 tgcaaaacca aatgaaactg tcgtagcatt tgtcggtgat ggcggttttc aaatgacgaa
     6421 ccaagaaatg gcattgctga acgaatttaa cttaaatatt aaaatcgtat tgattaacaa
     6481 cggtacgctc ggaatggtga aacaatggca agacaaattc tttaaccaac gtttttcaca
     6541 ttcagtattt aacgatcaac ctgacttcat gaaaatgagt gaagcctatg gtgttaaagg
     6601 ctttttaatc gatgacccga aatgtttaga agcgcaaatc gatgcggcat ttttacacaa
     6661 tggtcctgca ttaattgaaa ttcgcatttc accagtagaa cctgtattgc ctatggtacc
     6721 aagtggcaaa gcgaaccatg agatggaggg actgttatga gacgaacatt caaattacgc
     6781 gttttcgata aagccggcac actcaaccga ttaacaagtt tattcgtaag acgccaaatc
     6841 aatatcgtga gtattactgc cacaccgacg ttagatgaag ggatttcaga aatcacgttt
     6901 atcgctgaag tacctgatga cgaaaaacaa cgtacgatca ttcaacagtt aattaagcaa
     6961 gtcaatacgt taacagttga agatattacg aacattaata cgtttaatcg cgaattacta
     7021 ctcattaaac taaaaaagcc gataccacaa cagcaatttg ataaagtatt acaaccgtat
     7081 gatgcgctag tttctatttt gaaggaaaac ggtcaatatt tgtatttaca agctaccggc
     7141 ccgcaataca cattgaacca ccttttagac gatctatcat catttcatat tgagcaagtt
     7201 gcacgtactg gtacagctgg aattatttga aaaatcaaaa aatattattt ggaggcattt
     7261 taatatgaca aaagtttatt atgattcatc agtagagaaa gatgtattac aaggtaaaaa
     7321 aattgcggtt attggttatg gttcacaagg tcatgcccac gcacaaaact taaaagacaa
     7381 tggctatgat gtcgtaatcg gtattcgccc tggacgttca ttcgaccaag cagaagaaga
     7441 tggttttaat gtttacaccg tagcagaagc tgtcaaacaa gccgatgtgg tgatggtgtt
     7501 actccctgat gaaattcaag gtgacgtgta caaaaatgaa atcgagccta acttagaagc
     7561 aggcaacgca ttagcatttg cgcacggctt taatattcaa tttaacgtga tccaaccacc
     7621 gagtgatgtg gatgttttcc tcgttgcgcc aaaaggtcca ggtcatttag ttagacgtac
     7681 atttgttgag ggttcagccg taccagcatt attcgctgtg caacaagatg catcgggtga
     7741 agcacgtgat ttggcattaa gttacgcgaa agggatcggt tcaacacgtg caggcgtatt
     7801 agaaacatca tttaaagaag aaactgaaac ggatttattc ggtgaacaag ctgtcctttg
     7861 tggtggcgtg acacgtctca tccaaagcgg ttttgaagtg ttagtggaag caggttacca
     7921 gccagaaatc gcctacttcg aagtgttaca tgaaatgaaa ctgatcgttg acttaatgta
     7981 tgagggcgga cttgaaaaca tgcgttattc tatttcgaac actgcagaat ttggtgacta
     8041 cgtatcaggt ccacgtgtca ttacagaaga aacgaaagaa aatatgaaag ctgtattaaa
     8101 agatattcaa gacggtacat ttagcactcg tttcattaaa gataatgaag atggctttaa
     8161 atcatttaaa caaatgcgtg aagcacaaca aggacatcaa attacagcag tcggtcaatc
     8221 tttacgtgaa atgatgccat ttattaaatc gaaaagcatt caaaaataat tttttaagga
     8281 gtgaatgaaa atgtctagtc atattcagat ttttgatact acactacgcg atggcgaaca
     8341 aacaccaggc gtcagctttt cctttgaaga acgattaaaa ctggccgaac aactcgaaaa
     8401 atggggtgtc gatgttattg aggctggctt tcccgcttca agtcaaggca gctttgaatc
     8461 tgtacaagca atcgctcgaa cgttaaaaca taccactgtt acaggtttag cacgttgctt
     8521 aaagtctgat atcgatgccg tatacgaagc gacaaaagat gccgtttccc cttctatcca
     8581 tgtctttatt gcaacgagcc ctattcactt agagtcaaag cttcatatga cggaagctga
     8641 agtgctcgaa gcgataacga cacatgtgag ttatgcaaaa gaacgttttg atatcgttca
     8701 attttcacca gaggatgcga cacggacacc gttgccattc ttaatccaaa gtgtacaaac
     8761 tgcagtagat gcaggggcaa ctgttatcaa tattcctgat acggtgggct atacgtatcc
     8821 aactgaatat ggcaacattt tcaaagcact cacagaaaaa atcaagtcgg aagtcccaat
     8881 tacgtacagt gcccattgtc atgatgacct tggcttagct gtagcaaata gcatggctgc
     8941 catcgaaaat ggtgcgacac gtattgaagg aacggtcaat gggattggtg aacgtgccgg
     9001 aaatactgca cttgaagagg tcgtattagg tttatacgtc cgtcaagatc attatcaaat
     9061 tcaaacgcaa attcaactcg aattgacgaa gcaaacttct gatatggtcg cacgctatgc
     9121 tggattgaga gtaccacgta ataaagcgat tgtcgggaaa aatgcgttta gtcatgagtc
     9181 tggtatacat caagatggtt tcttgaaaaa cccggaaacg tacgaaatta tgaccccaaa
     9241 actcgttggt gtgaaaaaaa cggaactgcc actgggaaaa ttatcaggta aacatgcgtt
     9301 ccaggataaa ttgaaacaac tcggatatga cattgattta gaagagcaaa aagtattgtt
     9361 taaagcgttt aaagggattg ccgacaagaa aaaacacgtc actgatcaag atattcacgc
     9421 attgattcaa aatagtgagc atgataaaca tgtcgcctac catcttgaaa cactacagct
     9481 tcaatttgta tcgaatggcc ttcaaagtgc tgttgtggtc gttcgcgata ataatgatca
     9541 acattatcaa gattctagta ttggtaccgg ctccattgtt gcgatttata atgcggtcga
     9601 tcgtattttc aatgtcgaat ctgtactgtt agattatcgt attgatgccg tgtctgaagg
     9661 ccgcgatgca caagctgaag ttcatgtaca agtagaagtc aatggccaag aatatgtagg
     9721 tgttggtttt gaccacgata ttttatatgc ctcatgcaaa gcctatgttg aagcgataag
     9781 taaatcggtg caatccattc aaaaagaagg tgtcgcacaa tgacttttaa aattgtagct
     9841 ttacctggcg atggcattgg accagaaatt atgtcaggta cattggattg tttggacgca
     9901 cttgcatctc aagttgattt tgattatacg gtggacagtt atgcgatggg aggttgtgcc
     9961 attgatcaat atggcacgcc cctacctgat gcaacattag atgcttgtca acgtgcagat
    10021 gctattttac tcggtgcgat tggtggccct caatggacga acccacaatg tcgtcctgaa
    10081 caaggtttac tgaatttgcg aaaagcattg aatttatatg ccaatattcg acctacacgt
    10141 gtgacaacag acatggcgta tttatcaccg ttaaagcaat ccattgtcga aaataccgac
    10201 cttgttatcg ttagagagtt gacgagtggc atctactttg gcgagccacg ctacctgaaa
    10261 gacgatgaag cacgtgattc aatgacttat acgaaagagg aaattatacg cattgcgcat
    10321 gtcggttttc aattggctca atcacgtcgc caaaagctca catctgttga taaagaaaat
    10381 gtacttgcca gcagtcaatt gtggcgtcgt actgttaatg aagtcgctga acaatatcct
    10441 gacgttacgg tcgaacattt acttgttgat gcatgtagta tgcatttaat caaacgacct
    10501 gctgattttg atgttatcat cactgaaaat ttatttggcg atattctaag tgatgaagcg
    10561 tcgatgctac ctggttcact aggactctcc ccttccgcaa gttttagtga aggtggacca
    10621 aaattatacg aaccgattca tggctcagca cctgacatcg ccggtcaaaa taaagccaat
    10681 ccgtttggca tgttgttgtc actcgctatg tgtttacgag aatcagctga acgagatgat
    10741 atggcaacaa ttattgaaac aacggtcgat acattaatag ctaaagggat cacaacagct
    10801 gatttggggg ggcaatacgg cactacggac attttcaaac attttaaagc attcattaag
    10861 ggggcataac gaatggggcg tacacttttc gataaaattt gggaccaaca tacgattacc
    10921 gggcaacaag gtgaaccgca attgttatac attgatttgc atttgataca tgaggtgacg
    10981 tcaccgcaag catttgaagg gctcagaatg caaaaacgaa ctttacgaag acctgattta
    11041 acgtttggca cattagatca caatgtacca acggtcgata ttttcaacat taaagatgat
    11101 atcgcaaaca agcaaattca agcgttacaa caaaactgta aagactttaa cgtcacattg
    11161 tttgatatgg gctctgatga acaaggtatc gtacatatgg tcggacctga aatggggtta
    11221 acgcaaccgg gtaaaacgat tgtttgtggc gactcccata ctgcaacaca cggcgcattc
    11281 ggtgcgattg cgttcggtat cgggacgagt gaagttgagc atgtatttgc tacacaaacg
    11341 ctatggcaaa cgaaaccgaa aaatttaaaa attaacgtaa ccgggcaact tcctaaaggt
    11401 gtttatgcga aagacattat tttgcattta atcaatcaac acggcgttga ctttggtaca
    11461 ggttatgcac tggaatttgc tggagaaacg attcgcaatt tgtcgatgga gggtcgtatg
    11521 acaatttgta atatggcgat tgaagcaggt gcaaaatacg gactgattca accagataac
    11581 acgacttttg cataccttga aggacgtcgt tacgcacaaa acattgagga caaacttgat
    11641 gattggcgta aactatacag tgatgacgac gcgcaattcg ataaaatcat tgaattagat
    11701 gtgacagcat tagaaccaca agtcacttgg ggcacgagtc ctgaaatggg tgtcagcttt
    11761 agtacaccat tcccagagat tcaaaatgtc aatgacgaac gtgcgtatca atatatgggc
    11821 ttaaaaccag gtcaacttgc gacagatatt ccgttaggct atgtgttcct cggttcatgt
    11881 acgaatgcac gtatttccga tttagttgaa gccagtcaca tcgtcaaagg taatcaagta
    11941 cacgaaaaca ttacagcgat tgtcgtacct ggctcacgtc aagtaaagaa agaggctgaa
    12001 gccatgggcc tagatacaat ttttaaagat gctggttttg aatggagaga acctggatgc
    12061 agcatgtgtc tcggtatgaa ccccgaccaa gtgccagctg gtgtccactg tgcgtcaacg
    12121 agtaaccgta acttcgaagg ccgtcaaggt aaaggtgcaa gaacacatct ggtatcccct
    12181 gctatggctg cagctgcggc aattcacgga cgctttgtcg atgtgagaaa ggtggttgaa
    12241 gcgtgatgga aattaaagca attacacaat attcgggcaa aacggtccca ttatttcatg
    12301 acaatattga taccgatcaa atcattccga aagtccattt aaagcggata tctaaaacag
    12361 gttacggccc ttttctcttt gatgaatggc gttatttaga agacggttca gataatccta
    12421 atttcgtctt aaatcaacct gaatatgaag gggcatccat tttaattacc ggtgacaatt
    12481 tcggttgtgg ttcgagtcgt gagcatgccg catgggcgtt aaaagatttc ggttttcaag
    12541 tgattattgc ggaaagtttc agtgacattt tttatatgaa ctgtacgaaa aatgcactgt
    12601 tgccgattcg acttgaccgt gcatcacgag aagcgattgc gcgttatcct gaaatcacaa
    12661 ttgacttgcc acaacaaatc atccaaacac ccgagcaaaa ttatcacttt gacattgatg
    12721 aaacctggaa agaaaaactt gtgaatggct tagatgatat tgctatcaca ttaaaatatg
    12781 aagcattaat caaagactat gaactaaaac atacttaagg agtgggaaca atgtctgtaa
    12841 aaactacacc tgttcaagcc caagatgttg aagatgcatt tttacgtctc aacacaattg
    12901 ttaaagaaac accattggaa aaggatcatt atttatcgct caaatatgat tgtaatgtat
    12961 atttaaaacg cgaagatctt caatgggtgc gttcatttaa actacgtggc gcttacaatg
    13021 ccattgctgt attaccagaa gaaaagagaa accaaggtat cacatgtgca agtgccggaa
    13081 accatgcgca aggtgtcgcg tttacagcca aatacctcaa cttacatgcg gttatcttca
    13141 tgcctgtgac aacaccaaaa caaaaagtca atcaagttca atttttcggt ggtgacaacg
    13201 ttgaaattaa actagagggc gatacatttg atgattgctt aaagtcggcg ctgagttata
    13261 ctgaacaaca cgatatgacc ttcattgatc cgtttaataa tgtgcatacg atcgctggtc
    13321 aagggacatt agcaaaagaa atgatcgaag cggcaaaaac ggacaatatc acaattgatt
    13381 atgtgttcgg cgctattggt ggtggcgggc ttatgtcagg tgtagcgact tattttaaag
    13441 cacattcccc ttctaccaaa ctgattggtg tggaaccatt aggcgcgagc agtatgtatc
    13501 aatccgtaca agcaggcgaa gtggtgacat tggacaatat cgataaattt gtcgatggcg
    13561 cttctgtcgc acgtgtgggt gaaattacat ttaacatttg tcgtaaagca ttagatgatt
    13621 atgtgcaaat tgacgaaggg gctgtttgtt caactatttt agacatgtat tcgaaacaag
    13681 ccatcgttgc agaacctgcc ggcgcattaa gcgtcagcgc cctagaacaa taccaagatc
    13741 aaattaaagg gaaaaatgtc gtctgtatcg tttctggagg gaataacgat attaaccgaa
    13801 tgaaagaaat tgaagaacgt tcattattat acgaagaaat gaagcattac tttattttaa
    13861 atttcccaca acgtccaggg gcactcagac aattcgtgaa tgatgtgctt ggaccacacg
    13921 atgatattac caagttcgaa tatctgaaga agtcttctca aaataccgga actgtcatta
    13981 tcggcattca acttcaaaat agagcagacc tagacacgct cattcgtaac gtcaatcaat
    14041 ttgaccctaa aaacatttat attaacgaaa acaaaatgct gtattcgtta ttaatttaag
    14101 atgattcaaa aggagcaaac ttgagagaac cagctctcac atttgctcct ttttaaaatt
    14161 atgagatatt agtcaaattg atactttctc atagcgatac taaatccagt taagacgacg
    14221 agcatcaata tcgcatcaat cataaaaact tgtgcggcat tatcattaag gataaaccca
    14281 aaaaagctca gtgaaacagg tataatcgct tgtgcaatag atgaattcag cgaaaagacg
    14341 cgccctttat attcgtcctc tactgccttc tgtaaataga cgccataagg tgtattaata
    14401 attggtaaac ttacaccaat caacatatat gtcgcaatca gaaagataaa tgacgtcaaa
    14461 ttttgatgtg ggtacaataa aaagacgcca agtgaaaata aagtgacaat ttcaatcaaa
    14521 attccaatct tataaaataa tgtgacccct cttttcacag gataaatcga catcacaaat
    14581 gacactaaaa atagcgcaat cgtgtaacct gattcaatca tcccaaactg tgtcgattta
    14641 agatgcaact gttgtatcgc aataatcggt acgccaacaa ctatgacatt gattaaaaag
    14701 ttgtttaaca tcgcacaaac gagaaatgtc ataatttctt ttttctttac taagtattgc
    14761 acaccttctt taaaagagtg cacgaactga cttttcattt gttggtgatt aataattggt
    14821 aatgattgta taagaataat cgaaatcgct ttagtaagca tattcatcat cccgatgact
    14881 tgcagcggta taaatgcaat gacaatgccc ccaatgattg gagaaacaaa gcttgtcaat
    14941 gtcgacaccg tttgtctaat cgatatcaca cgctctaaat tgtctgtcac gatacgttgt
    15001 aagtttttct gaataatgac agagtttatc ccatcaggaa ccgttaataa gagacctaaa
    15061 caaataatca tatatacatt gtcatcgtat aacaaagaaa aaatgatcag tgcagccaca
    15121 cttgataatt gagagtacaa aattaaccgt ttattgttga ctgagtctat aaatacacca
    15181 ctaattggcg tagaaagtat ggttgtgatc acaatcaaag ttaaataaat actgtacaaa
    15241 taactatttt ctgtgttttt caaaatatgg aaggcacaag caaaactgaa gacacttgaa
    15301 ccaatggtag aaataaaacc aaagatgatt aatttataag cattacatgt caaagtgtga
    15361 caccttcaaa ctttatattc ttgatgcctg tgcgaatcgt
//
LOCUS       DANHPA010000064        14617 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.064, whole genome shotgun sequence.
ACCESSION   DANHPA010000064 DANHPA010000000
VERSION     DANHPA010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 14617)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14617)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14617
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.064"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(335..2677)
                     /locus_tag="PTC28_001562"
     CDS             complement(335..2677)
                     /locus_tag="PTC28_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /protein_id="HDK5716846.1"
                     /translation="MKGTGLKSMMLLMVLVIAVLIFNHVSSDAAEQTSQQAAPETQVE
                     ADAETTATHTSQPDVTSQQLATTEETAQQPSESVTGLKQEGPATATVATTEDDTIESI
                     APTSAENVAQAKKDTPMMLRLSAKKAQPEATSIDRASHETAATTHTILHTNDIHGRMV
                     EEKDRVLGMAKLKTLKEQQNPDLLVDAGDAFQGLPLSNQSKGEEMAKAMNAVGYDAMT
                     AGNHEFDFGYDQLKKLEGMLNFPIVSSNVYKDGKLAFKPSVVIQKNGVRYGVIGVTTP
                     ETKTKTSPKGIVGVTFADPLTSVTREMDRLNGQVDVFIVLSHLGIDPTTKEAWRGDYL
                     TRQLSQNKQYHHPIFVIDGHSHTVIEHGQKFDQDVLAQTGTALANVGKLTFKQSGQQF
                     SNAEASLLNVKNLAKLQPDAAVKAQVDKANEAFLKATSEVIIPNNTVDFQGERDDVRT
                     HETNLGNAITDAMEAYGQKGFSRPSDFAVTNSGGIRASIAKGKVTLNDVITVLPFGNT
                     IAQISVKGSDVWKAFEHSLSAPTMTTGGETQLSANGGLLQVSKSIQVYFDMNKAPGER
                     INAIRVLNKQTGQFEDLDMSRTYAVAMNDFTASGGDGFDMFGGPREEGISLEQVFANY
                     LKTADLSQYATTAPQRIINGKPAQNSEMPKITPPSSKGDNVILFPQTKRSKVVPMTKV
                     PTAEGQSQQTAMHVASEHRGMAQSMVPAVSMISTDATGKMAQAHRVMTQNVSALGHHE
                     AKNDAQQLPNTGATEQAPIVGGLFMLGAGLVIMRRQKHHA"
     gene            complement(3619..4566)
                     /gene="cobA"
                     /locus_tag="PTC28_001563"
     CDS             complement(3619..4566)
                     /gene="cobA"
                     /locus_tag="PTC28_001563"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HDK5716847.1"
                     /translation="MSPLTQAATKVYLVGAGPGDPCLLTKKAERCIQKADVILYDQLV
                     NPFLLQLSRPDAEWIHVGKTPYTRTTKQARINALLVEKAQAAQVVVRLKGGDPAIFGR
                     VTEEVDTLRAHQIPFEIVPGVTAASAAMSQLGRGLTERGVSTHITFTTGHFKNNEEND
                     IDLTTLANDGTLAIYMGIKRLPELMRTIQQQIGIDFPVAIIFNATRSDQHVVSGTVTT
                     IVDRIAALPERLGPGITIVGQVVRALDEAVLKPGADFDTVLIKGERQRAIEAAYEWAE
                     AGHAVLIDDRDYSDLHPTQAKTIARWVDEMALTREIALS"
     gene            complement(4554..4868)
                     /gene="nirD"
                     /locus_tag="PTC28_001564"
     CDS             complement(4554..4868)
                     /gene="nirD"
                     /locus_tag="PTC28_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase small subunit NirD"
                     /protein_id="HDK5716848.1"
                     /translation="MLQQKVKVAKLTDLEPLIGKKVYVGETPVALFLTEDGDIKAIHN
                     VCPHQQGPLSEGTVSEHYVFCPLHDQKIDLNTGEVQEPDEGCVATYPVEVVDGDIYIC
                     LP"
     gene            complement(4873..7278)
                     /locus_tag="PTC28_001565"
     CDS             complement(4873..7278)
                     /locus_tag="PTC28_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDK5716849.1"
                     /translation="MSKTKLLMVGNGMAGVRTIEEILDRDPDRFDITIIGKEPYPNYN
                     RIMLSNILQNKMTVEETIMNPYEWYEERHIRLITGDKVVKIDREAQQVETEQGQVVDY
                     DQMIIATGSDAFILPIDGSRLEGVVGFRTIDDTEKMLEVAKTKKKAIVIGGGLLGLEC
                     ARGLVEQGMDVTVVHLAEWLMEVQLDRRAGELLKKDLEKQGLRFELQANTQEIIGDKQ
                     VEGIRLSDGRVLDADMVVMAVGIRPVTKEARAAGLDIGRGIIVDDFMQTSDPKIYAVG
                     ECAEHRSKVYGLVAPLYEQGKVLADHITGRPTEGYQGSTTFTSLKVSGCDLFSAGRIT
                     ENDDIRGIEMFNGIDNIYKKVFVQDHAIVGAVLYGDTEEGNRFYNMMKKGETIDDYTL
                     VSILHKAGEVDAMNVAEMDDDETICGCNGVSKGTIVSAIQEHDLTSVADVTRVTKAGN
                     SCGKCKGQIAELLEHTLGDDFVANAPTGICTCTDLSRDQIVTQIRAKGLKTSKEVRHV
                     LDFKNKGGCPKCRPALNYYLNMVYPTEHEDEKASRFANERYHANIQKDGTFSVIPQMR
                     GGVTDAEQLIRLGEVAKQYDVPLVKVTGSQRIGLYGVNKEDLPAVWEALGMRSASAYA
                     KKTRSVKSCVGKEFCRFGTQYTTRLGIRLEATFEYIDTPHKFKMGVSGCPRSCVESGV
                     KDFGVIGVENGFQIYVGGNGGTTVEVAEHLTTVPTEDDVIKLCGAYMQYYRETANYAE
                     RTAPWLRRIGFDQVKAVVLDPEKQQALYDRIMIAKAAVDQEPWHDIVENERKQKIFEV
                     EKV"
     gene            complement(7271..7732)
                     /locus_tag="PTC28_001566"
     CDS             complement(7271..7732)
                     /locus_tag="PTC28_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siroheme synthase"
                     /protein_id="HDK5716850.1"
                     /translation="MYPIQLNLTHKSVVIVGGGNIAWRKFTKLKDEAMQIKVVSPTFN
                     DAFLNETWGTHIQLIQKRYERGDLNGADLIIIATDDAVVNQQVRDDAASTQWVNHTGD
                     RTQSDFYNSLDIEHQGMKISISSEGQSIQHTKAYAAKIKAFLATLEEDNDE"
     gene            complement(7714..8454)
                     /locus_tag="PTC28_001567"
     CDS             complement(7714..8454)
                     /locus_tag="PTC28_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sirohydrochlorin chelatase"
                     /protein_id="HDK5716851.1"
                     /translation="MRKVIFVVHGMRKGQLNETLTQFVAQLFEAEQMDYAMAFLESET
                     ASLPTVIEDQVTQGVTELYLVPLLLFSASHYYEDIADSLEGWRQLYPQTTFYLAQPLG
                     THPKMKNWVASQIARYLDEMVKDTAVVVLAHGSARFNEPDIALETIANQLSTATRPCY
                     PCMVYGKLNYEKILAELAQQWPKLLIIPYFFYDGYLVQRTKQRIGALDLPCDVTFTTA
                     INFHPVLKEVILNRLEACGGMTPCILSS"
     gene            complement(8626..9183)
                     /locus_tag="PTC28_001568"
     CDS             complement(8626..9183)
                     /locus_tag="PTC28_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDK5716852.1"
                     /translation="MSQVNIRMATLDDAEALHKLMHRAFTPLREVGIDWPSVNATLEM
                     IQDNIQNNAAYVLEVEGKIVSTLSIRFPWEPSQPVSKYPFVWWFATDPDYGGVGYGNQ
                     MMTYVEETILRDTLKAPAVVLGTSARKMSWLKDVYERRGYETFFSFEDETGDEGAMMV
                     KVLIPERYNKDLLAPPPWAQGESSY"
     gene            complement(9407..10231)
                     /locus_tag="PTC28_001569"
     CDS             complement(9407..10231)
                     /locus_tag="PTC28_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HDK5716853.1"
                     /translation="MGIQKPTKTVSDTYTSRETVQSIIHSVAMKEVMLDKAMPRYILK
                     SMLSGFLLTIVTVFMLAMKTQMAGALPGVVNLMGAAAFSIALVFIVLTQAELLTSNFM
                     YMTVGLYYRTVSFGKTMWLFTICFIGNILGAFVLFILMYFTKVMTPEMIAALTSTVDA
                     KTVESTWQAILVKAIFANFFINIGIYVSMQYKEGLSKTFFIAIGVIIFVFMGYEHVVY
                     NAGLFVGMIFYNFDATSWLGVLKNIVFAFIGNYIGGGIFVGLLFAYFNGSRRIEQK"
     gene            complement(10447..11979)
                     /locus_tag="PTC28_001570"
     CDS             complement(10447..11979)
                     /locus_tag="PTC28_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HDK5716854.1"
                     /translation="MATTSASKKKEGATFKPLWFILSFVALIVVLLMPTPASLPLMGK
                     AALAILAFAVILWVTEAVTYPVSATIIVGLIILLLGFSPVQNLTQALGNPQSGGAVLK
                     GDDLFGTGNALKLAFSGFSTSAVALVAAALFLATAMQVTNLHKRLALLVLSFVGNKTK
                     NIVIGAILVSIILAFFVPSATARAGAVVPILLGMIAAFGATKNSKLAALLIITAVQAV
                     SIWNIGIKTAAAQNIVAINFINDQLGHDVSWGEWFLYAAPWSIIMSIVLYFVMLKVIP
                     PEQDAIEGGTELVKQQLAELGPVKPTEWRLIIISLLLLVSWSTEKVLHPIDSSSITLI
                     ALAIMLTPKIGVMNWKEVESRIPWGTIIVFGVGISLGNVLLKTTAAQWLSDQTFGLMG
                     LKGMPIVATIALISLFNILIHLGFASATSLASALIPVFISLTSTLSLGDNAIGFVLIQ
                     QFVISFGFLLPVSSPQSMLAYGTETFTVKDFLKAGIPITIVGYILVVIMSMTYWKWLG
                     LL"
     gene            complement(12077..13084)
                     /locus_tag="PTC28_001571"
     CDS             complement(12077..13084)
                     /locus_tag="PTC28_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HDK5716855.1"
                     /translation="MKKLLYRWFIDGLSYMTLGLFSSLIIGLIMQTIGKQTLFPSLHL
                     EFLVEVGKVAQSLTGAAIGAAIAYGLKGKPLVIFAAVIVGMLGYETFSGGAVGAFFAV
                     LIAVELSQLYAAKTKIDIIVTPLLTLMIGGLVAKFLGPVLSQLMLEIGKVIMISTDQQ
                     PFVMGILVAVIFGLCLTAPISSAALALMLDLSGLAAGAATIGCACQMIGFAVTSYKEN
                     GVSGIISIGLGTSMLQVPNILLKPLIIVPPTLASAIIAPIMTVLFPMTNNAAGAGMGT
                     SGLVGQIMTINTMGASLNTWLLIMMFHFVLPAFVTFVIYRFMIKRQWLHVGEQKIQLN
                     Q"
     gene            13144..13863
                     /locus_tag="PTC28_001572"
                     /pseudo
     CDS             13144..13863
                     /locus_tag="PTC28_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002489526.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
     gene            14010..14279
                     /locus_tag="PTC28_001573"
     CDS             14010..14279
                     /locus_tag="PTC28_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716856.1"
                     /translation="MLYDVFNGNASAQQIASQIGGDLVKRFAPNTDVGGLINSLTIKI
                     NATDGFAWTDLAGVISDIAGFIASYIPQAKVVTIATALWDYSSLL"
BASE COUNT         4219 a         3226 c         2591 g         4581 t
ORIGIN      
        1 accattcgct gatttaatta tattcacaat gctatattat ttaaatacta agaattctaa
       61 aaacactata ctactttttg tcgccaaagc tgtgatagtc atacttggta tgatattgat
      121 ttaaatacac tcaaattatc gtggtattta tagaaatcaa attttaatga tttcttaagt
      181 gtttatatgt gaatattcga gtgtgataat agtcattaat ttgctattca ccctctcata
      241 acatcgagcg tgagactgtc taatcaaaac cccgtgtgaa tgaagtcccc cctaaagttg
      301 aacctttcca ctcaacttta ggggggatac tcatttatgc gtggtgcttt tgacgtcgca
      361 taatcactaa acctgcacct agcatgaata ggccgcctac gataggtgct tgttctgtcg
      421 cacctgtgtt tggtaactgt tgtgcgtcat tcttagcttc atgatgacct aatgctgaaa
      481 cattttgtgt cattacccta tgcgcttgtg ccatctttcc tgtcgcatca gtagatatca
      541 tgctcactgc tggtaccatg gattgagcca taccacgatg ttcagaggct acgtgcatag
      601 ctgtttgttg tgactgtccc tctgctgtcg gcacttttgt catcggcacc actttggatc
      661 gttttgtttg cgggaataga atcacgttat ccccttttga tgacggtggt gttatctttg
      721 gcatttcact gttttgagct ggtttaccgt taataatacg ttgtggtgct gttgtcgcat
      781 attgtgataa atcggctgtt ttcaaataat tcgcaaagac ttgttcgagt gaaatccctt
      841 cctcacgagg tcctccaaac atgtcaaaac cgtctccacc tgaagctgta aagtcgttca
      901 tcgcgactgc atatgtccga ctcatatcta gatcttcaaa ttgacctgtt tgcttgttta
      961 acacgcgaat cgcgttaata cgttcgccag gtgctttatt catatcgaaa taaacttgaa
     1021 ttgatttgga tacttgtaac agaccgccat ttgccgataa ttgcgtttca ccgccagttg
     1081 tcatcgttgg tgcacttaaa ctatgttcga aagccttcca cacatcgcta cctttgactg
     1141 aaatttgcgc gatcgtattg ccgaatggta acaccgtaat cacatcattt aatgtcactt
     1201 tgcctttcgc aatcgacgca cgaatcccac cactgtttgt cactgcaaaa tcagatggac
     1261 gactaaaacc tttttgacca taagcttcca ttgcatcagt aatggcattc cccaagttcg
     1321 tttcatgtgt tcttacatca tcacgttcac cttgaaaatc aactgtatta ttcggaataa
     1381 tcacttctga tgttgcttta agaaatgctt cattcgcttt atcgacttgt gctttcacag
     1441 cagcatctgg ttgcaacttc gctaaatttt tgacattaag caaactcgct tcagcattcg
     1501 aaaactgctg accagactgt ttgaacgtca atttacccac attcgcgagt gctgtccctg
     1561 tttgcgctaa tacgtcttga tcaaactttt gaccatgttc aatcaccgta tgcgaatgcc
     1621 catcaataac aaaaatcgga tgatgatatt gtttattttg actgagttga cgtgttaaat
     1681 aatccccacg ccatgcttct ttggttgtcg gatcaatccc taaatgagat agcacgataa
     1741 acacatcaac ttgcccattc aaacggtcca tttcacgtgt cacacttgtt aacggatctg
     1801 caaatgtcac accgacaatg ccttttgggc ttgtctttgt tttcgtttct ggcgtcgtca
     1861 ccccgatcac accataacgg acaccatttt tttgaatcac gactgatggt ttaaatgcca
     1921 atttcccatc tttgtataca ttagagctga caatcggaaa gttaagcatg ccttccaatt
     1981 ttttcagttg atcataacca aagtcgaatt catggtttcc cgctgtcatg gcatcataac
     2041 cgactgcatt catcgctttc gccatttctt cccctttaga ttggttagat aacggtaagc
     2101 cttgaaatgc atcgcccgca tcgacaagta aatccggatt ttgttgttcc tttaacgtct
     2161 tcaacttcgc cataccaagc acgcggtctt tctcttccac catgcgaccg tgaatatcat
     2221 tcgtatgtaa aatcgtatgt gtcgttgccg ccgtttcatg acttgcacga tcaattgatg
     2281 tcgcttctgg ttgtgctttt ttagccgaca atcttaacat cattggtgtg tcttttttcg
     2341 cttgagcaac attttctgct gacgttggtg cgattgattc aatggtgtca tcttcagtcg
     2401 tagctaccgt tgcagtagct ggcccttctt gttttagacc tgttacactt tccgatggct
     2461 gttgtgctgt ttcttctgta gtagctagct gttgtgatgt cacatccggt tgactcgtat
     2521 gcgttgcagt cgtttcagca tctgcttcca cttgagtctc cggagctgct tgttgtgatg
     2581 tttgttcggc tgcatcactt gaaacgtgat tgaagatcaa cacagcgatg accaacacca
     2641 tcaacagcat catacttttg agccctgtcc ctttcatata aaacctcctt attgtcatta
     2701 caattttatc ctagcacaaa gcctcgacca attgtttaaa atttttgtta atttggccat
     2761 aaatatagaa ctcgctcatc cattaccaaa aacgatatat attgcgtatt ttgtttaact
     2821 tgccctattc ttaagattta tgtttttgat tgccctcatg gcctcgcgtt ccgaggggct
     2881 gtcccttcga ctaactcacg cttgattaaa ctgttacatt tgttgaggcg ttagtggatt
     2941 ttgggagccg tacagaaatc tcatgtgtaa caaagatttc gtcgtattgc ccccgcaagg
     3001 ctgactagac ttctcaaaag cgaacgcatt gagaagtcag acagctactg cgataaatag
     3061 tacccactat ataaatatca gaaatcatat ttaagtcttt gattcatccc ctcaggagtc
     3121 tcagccctct aggcaatctt acacccaatg cagtcactta gggcaagttg atgaaataaa
     3181 gacaatctat tgcatccaat tcagttttat atttcgacga tgtgagcatg atttatggat
     3241 ataaatccat aaaaataaac agaactggga aaacttaatg acccagttct gtttatttta
     3301 aatgatgtta aactttgata atcccgcttc tgagcttatt tttctaagca atcatcccta
     3361 ctctcacatt gcgatttcat ttccaaacaa aggagtcgag tatgcccata cgccgagact
     3421 tatcctaaca atattcagag gtacacattt tgattgcgtc ctgaacgaga cgcttgaggg
     3481 atcagacgca gccgaaaatc caattcgcct tctatcaaat ggacacttct atcaagccga
     3541 atttagttga ggcaagtccc ctaagaacgc gagttcaaag gacgcaatca gctaaatatt
     3601 caagccctca cttttggttt atgacaaagc aatctcacgt gtcaacgcca tttcgtccac
     3661 ccaacgcgct attgtctttg cttgtgtcgg atgcaaatcg ctataatcac gatcgtcaat
     3721 caaaactgca tgccctgctt ctgcccattc atatgccgct tcaatcgcac gctgtctctc
     3781 acctttaatc aacaccgtgt caaaatcagc acctggcttc aataccgctt catctaacgc
     3841 tcttacaact tgacctacaa tcgtaatgcc aggtcccaaa cgttcaggca gtgctgcaat
     3901 tcggtccaca atcgtcgtca ctgtgccact gaccacatgt tgatccgaac gtgtcgcatt
     3961 aaaaatgatc gcaactggaa aatcgattcc aatttgttgt tgaatcgtac gcatgagttc
     4021 aggtaatcgt ttaatcccca tataaatcgc gagtgtgccg tcatttgcga gtgtcgtcaa
     4081 atcaatatca ttttcttcat tatttttaaa atgccctgtt gtaaacgtaa tatgtgtgga
     4141 aacgccgcgt tctgttaatc cacggcccaa ctgactcatc gcggcacttg ctgcagtcac
     4201 accaggtacg atttcaaatg ggatttggtg tgcacgtaac gtatcgacct cttctgtgac
     4261 acgtccaaat attgcagggt cgcccccttt caagcgaacg accacttgtg ccgcttgcgc
     4321 cttttccact aacaatgcat taatgcgcgc ttgcttcgtt gtacgtgtgt aaggtgtttt
     4381 gccaacatga atccactctg catctgggcg tgataattgt aataaaaagg gattcacgag
     4441 ttgatcatac aaaatgacat ctgctttttg aatacaacgc tcagcttttt tcgtcaacaa
     4501 acatggatcg ccgggacctg caccgactaa gtacactttt gtcgctgctt gcgttaaggg
     4561 agacatatat aaatatctcc atccacgact tcaacaggat atgtcgcgac acaaccttca
     4621 tcaggctctt gtacttcacc cgtgtttaaa tcaatctttt ggtcgtgcag tggacaaaat
     4681 acataatgct cgctcactgt gccttcagat aaaggacctt gttgatgcgg acacacgtta
     4741 tgaatcgctt taatgtcacc atcttctgtt aaaaacaatg cgacaggcgt ctcaccgaca
     4801 tagacttttt taccgattaa tggttctaaa tctgttaact tcgccacttt tactttttgt
     4861 tgtaacatcg ccttacacct tctcaacttc aaatattttt tgcttgcgtt cattttccac
     4921 aatgtcatgc catggttctt gatcgacggc agctttcgca atcataatac ggtcatataa
     4981 tgcttgttgt ttttctggat caaggaccac cgctttaact tggtcaaatc ctatacgtct
     5041 caaccatggg gctgtacgtt ctgcatagtt tgctgtttca cgataatatt gcatgtacgc
     5101 accgcataat ttaatcacat catcttctgt tggtactgtc gttaaatgtt cagctacttc
     5161 aacagttgta ccaccatttc caccgacgta tatttggaat ccattttcta caccgatgac
     5221 accgaaatct tttacaccag attcgacaca gctacgcgga caacctgata cacccatttt
     5281 aaatttatgt ggcgtatcaa tatattcaaa tgtcgcttcc aaacgaatac ctaggcgtgt
     5341 tgtatattgc gtaccaaaac gacaaaattc tttacctaca cagcttttca ctgaacgtgt
     5401 tttcttcgca tatgctgaag ccgaacgcat accgagtgct tcccaaactg ctggcaaatc
     5461 ttctttgttc accccataca agccgatacg ttgagaaccc gtgactttca ctaatgggac
     5521 atcatattgt ttcgccacct caccgagacg aatcaattgc tctgcatctg tcacaccccc
     5581 acgcatttgg ggaataactg agaatgtacc gtctttttga atgttggcat ggtagcgttc
     5641 attcgcaaaa cgtgatgctt tttcatcttc gtgttcagtt gggtacacca tatttaaata
     5701 gtagttcaag gcaggacgac attttggaca accgcctttg tttttgaaat ctaacacatg
     5761 acgaacttct tttgatgttt tgagcccttt tgcgcgaatt tgtgtcacga tttggtcgcg
     5821 tgacaagtct gtacatgtac aaataccagt cggtgcgttt gcgacaaagt catcacctaa
     5881 tgtatgttca agcaactctg caatttggcc tttacattta ccacaagagt tccctgcttt
     5941 tgtgacacgt gtcacgtctg caactgatgt taaatcatgt tcttgaatgg cactcacaat
     6001 tgtacccttt gagacaccgt tacaaccaca aatcgtttca tcatcgtcca tttctgcaac
     6061 gttcatcgca tcgacttctc ctgctttatg caagattgac acaagcgtat aatcatcaat
     6121 cgtttcgcct tttttcatca tattgtagaa acggttaccc tcttctgtat ccccataaag
     6181 caccgcgccg acaatcgcat gatcttgaac gaataccttt ttataaatgt tgtcaatacc
     6241 gttaaacatt tcaatgccac ggatatcgtc attttcagta atgcgacccg cactgaacaa
     6301 gtcacaacct gacactttta atgatgtaaa tgttgtcgaa ccttgatacc cttcagttgg
     6361 acgtcctgta atatggtctg ccaacacttt gccttgttcg tataaaggcg caacaagacc
     6421 atatactttt gagcgatgtt ccgcacattc accgaccgca tagattttcg gatcactcgt
     6481 ttgcataaag tcgtccacga taataccacg accgatgtct aaccctgctg cacgtgcttc
     6541 tttcgtaaca ggacggatac cgacagccat gaccaccata tctgcatcaa gtacacgacc
     6601 atccgataaa cgaatccctt cgacttgttt atcaccaata atctcttgtg tattcgcttg
     6661 aagttcaaaa cgtaatcctt gtttctctag atcctttttc aacaattctc ctgcacgacg
     6721 gtctaattgt acttccatca accattccgc taaatgtacg accgtcacgt ccataccttg
     6781 ttcgactaag cctcgtgcac attctagccc taacaagccc ccaccgatga caattgcttt
     6841 ctttttcgtt ttcgcaactt ctaacatttt ttcagtatca tcaatcgttc tgaaaccgac
     6901 cactccttct aaacgtgagc catcaatggg taaaatgaac gcgtcagaac ctgttgcaat
     6961 aatcatttga tcataatcaa cgacttgtcc ttgttctgtc tcaacttgtt gtgcttcacg
     7021 atcaattttg actaccttat ctcctgtaat gagacgaatg tgacgctctt cataccattc
     7081 gtatgggttc ataatcgttt cttctactgt cattttattt tgtaaaatgt tcgataacat
     7141 aattcggtta tagttcggat atggttcttt accgataatc gtaatatcaa aacggtctgg
     7201 gtcgcggtct aaaatttctt caatcgtacg tacccccgcc ataccgttgc cgaccattaa
     7261 taatttcgtt ttactcatca ttatcctcct caagcgtcgc caaaaacgcc tttattttcg
     7321 ccgcataagc ttttgtatgt tgaattgact gcccctctga actgatactg atcttcatgc
     7381 cttgatgttc aatatccaga ctgttataaa aatccgattg tgtacgatct cctgtatgat
     7441 tcacccattg cgtcgacgct gcatcatcac ggacttgttg attcactact gcgtcatcag
     7501 tcgcaatgat gatgagatca gcaccattca gatcgccgcg ttcataccgt ttttgaatca
     7561 gctgaatatg ggtcccccac gtttcattca aaaaggcatc attaaaagta ggactcacca
     7621 ctttgatttg catcgcctca tcttttaatt ttgtgaattt tcgccacgca atgtttccac
     7681 caccgacgat gacgactgat ttatgtgtta gatttagctg gataggatac atggtgtcat
     7741 gcctccgcat gcttcaagtc gatttaaaat cacttctttt aataccgggt gaaaattaat
     7801 tgctgtcgta aaagtgacgt cacacggtaa atcgagtgcg cctatacgtt gctttgtacg
     7861 ctgcactaaa tagccatcat aaaagaaata cggaataatc agtagtttcg gccattgttg
     7921 ggcaagttca gctaagattt tttcataatt taacttcccg tagaccatac acggatagca
     7981 tggtcgtgtc gctgttgaga gttggttcgc aatggtttct aatgcgatgt caggttcatt
     8041 aaaacgtgca ctgccatgcg ctaacacgac aacagctgta tctttcacca tctcatctag
     8101 gtaacgtgcg atttgcgatg ccacccaatt tttcattttt ggatgtgtac cgagtggttg
     8161 tgccaaataa aatgtcgttt gaggatacag ttgacgccaa ccttctaaac tatcggcaat
     8221 atcttcataa tagtgtgatg ccgaaaagag taacaatggc actaaataaa gttctgtcac
     8281 gccttgagtc acttggtctt caatcactgt tggcaaactc gccgtctcac tttccaaaaa
     8341 tgccatcgcg taatccatct gttccgcttc aaataactgt gcaacaaatt gtgtcaatgt
     8401 ttcgttcagt tgtccttttc tcatcccatg gacaacaaaa attactttac gcaacacatc
     8461 accccctaca gttgtattgt agacgaaaaa cgaaatctaa tgtgataaaa ttcacataaa
     8521 aataaaaaaa tagggaatcc cctctcctgt atcttgaggg aattccctat cacttatcaa
     8581 catcgtcacc gctgaatcta tcggcacatg cttttcactt tacaactaat aagatgattc
     8641 accttgcgcc catggtggtg gcgcgagtaa atctttatta taacgttctg gaattaaaac
     8701 ctttaccatc attgcacctt catcgcctgt ttcatcttca aatgaaaaga acgtttcata
     8761 accacgacgt tcatacacat cttttagcca actcattttg cgcgctgaag tccctaatac
     8821 tacagcaggc gcttttaatg tatcacgtaa aatcgtttct tccacatacg tcatcatttg
     8881 attaccatag cctacaccgc cataatcggg gtctgtcgca aaccaccaaa caaacggata
     8941 tttagaaact ggctgactcg gctcccatgg aaaacgtatc gacaaggttg aaacaatttt
     9001 cccctctact tcgagcacat aagcagcatt gttttgaata ttgtcttgaa tcatttctaa
     9061 tgtcgcattt acggacggcc aatcaatccc gacctctctt aaaggtgtaa atgcgcgatg
     9121 catcagttta tgcagggcct ctgcatcgtc taaagtagcc attctaatgt taacttgaga
     9181 catagtgtcg cctcccttta cattcatatg tagttagatt atcaaatttt atatcgtata
     9241 gaaattaata cactttgctc actttgttcg atatggatag aggtaccgtt cgatgctgcg
     9301 cttattattt tgtttaaaca tattgatcac atgtatggta catattcata tcaaaaaaga
     9361 gctgaggttt aatgatggcc ccaactcttt tattgctatt ttctatttat ttttgttcaa
     9421 tgcgacgtga gccgttgaaa tatgcaaaca acagaccgac aaatatgccc ccaccgatat
     9481 agttaccgat aaatgcgaag acgatatttt tcagaacacc taaccaagaa gttgcatcaa
     9541 aattataaaa gatcatccct acgaataagc ctgcattata aacgacgtgt tcataaccca
     9601 taaacacgaa aataatgaca ccaatcgcaa tgaaaaacgt ttttgacaag ccttctttat
     9661 attgcataga gacataaatc ccaatattga taaagaaatt cgcgaagatg gctttgacta
     9721 atatcgcttg ccatgtcgat tcaactgttt tggcgtcgac tgttgacgtt aatgccgcaa
     9781 tcatttcagg tgtcatcact ttagtgaaat acatcaatat aaagagtaca aatgcaccta
     9841 aaatattacc gataaaacaa atagtaaata accacatcgt tttgccaaat gataccgtac
     9901 gatagtaaag acccactgtc atatacataa agttactcgt caatagttca gcttgtgtta
     9961 agacgataaa cactaaggca atactgaacg ctgccgctcc cattaaattt acaacaccag
    10021 ggagcgcccc agccatttgc gtcttcattg cgagcataaa cactgtgaca atcgtgagta
    10081 aaaaccctga cagcatcgat ttaagtatgt aacgtggcat cgctttatcc agcatcactt
    10141 ctttcatcgc aacggaatgg ataatgcttt gtaccgtttc tcgtgatgta tacgtatccg
    10201 aaactgtttt tgtcggtttt tgaatcccca tagttcaacc tccaatttaa tattcaacct
    10261 tgttgatgat tcatacaatg tcacttacat tttacatgaa tctcactgca attgtcataa
    10321 agtttgtgaa aataaataca aattctttgt cattttaaat catttttatt tacaccccga
    10381 cggcatgaaa taaaaacagc caagtgaagt gttatcccat acttggctgc tctcatgtgt
    10441 tgcttcttat agtaagccta accatttcca atacgtcata ctcataatga caacgagaat
    10501 gtaaccgacg atcgtaatcg gaatccccgc ttttaagaag tctttaacag taaatgtttc
    10561 tgtaccataa gcgagcatac tttgcggtga actcaccggc agtaagaatc caaaactgat
    10621 gacgaattgt tgaattaata cgaaaccaat ggcgttgtca cctaggctta atgtggatgt
    10681 taatgaaata aagactggaa ttaatgcaga tgctaaactt gtcgcacttg caaatcctaa
    10741 atgaattaaa atgttaaaca gtgaaattaa tgcaatcgtt gctacaatcg gcataccttt
    10801 caaacccatt aaaccgaatg tttggtcact taaccattgt gctgctgtcg tttttaataa
    10861 gacgttacct aacgaaatac cgacaccgaa tacaatgata gtgccccatg gaatacggct
    10921 ttcgacttct ttccaattca tgacaccaat tttgggcgtt aacataatcg ccaatgcaat
    10981 taatgtgata gatgaagaat cgattgggtg taacactttt tcagttgacc aagacacgag
    11041 taataataat gagatgataa ttaagcgcca ttctgttggt ttaactggac caagttctgc
    11101 cagttgttgt ttaacgagct ccgtaccacc ttcaatggca tcttgttcag gtggaatgac
    11161 ttttaacata acaaaataaa gcacgataga catgatgatt gaccaaggtg cggcatataa
    11221 gaaccattcg ccccatgaaa cgtcatgacc gagttgatca ttaataaagt taattgctac
    11281 gatattttga gcagcagcgg ttttaatccc gatattccaa atcgataccg cttgtacagc
    11341 tgtaatgatg agtaacgcag ctaatttact atttttcgtt gccccaaacg ccgcaatcat
    11401 acctaataaa atcggtacaa cagcgccagc acgtgctgta gcggacggta cgaaaaacgc
    11461 taaaataata gaaacaagaa tcgccccgat aacgatattt ttcgttttat taccgacaaa
    11521 cgataatact aatagtgcca aacgtttatg taagtttgtc acttgcatcg cggttgctaa
    11581 gaacaatgct gcagcaacta acgcgacggc actcgttgaa aaaccactaa aggctaactt
    11641 caatgcattt cctgtaccga ataagtcgtc accttttaac accgcaccgc cactttgagg
    11701 attgcctaat gcttgtgtta aattttgaac tggactaaat ccgagtaaga gtatgatgag
    11761 accgacaata attgttgcag ataccggata agtcaccgct tcagttaccc ataaaatgac
    11821 tgcaaatgcc aaaattgcta atgctgcttt ccccattaac ggtaaacttg caggtgttgg
    11881 catcaataac accacaatta atgcaacaaa gcttaaaata aaccataacg gcttaaatgt
    11941 tgccccttct tttttctttg aagctgaagt agttgccatt tttggctccc ccttttgtga
    12001 atttctttac ttatattgta tcaagaaagc gcttcaaaaa gatacctatg ttcaaatttt
    12061 cacaaaaaat taataactat tgattcagtt gtattttctg ttccccgaca tgaagccatt
    12121 gacgtttaat cataaaacga taaatgacaa atgtgacgaa tgcaggtagg acaaagtgaa
    12181 acatcataat gagtagccac gtattcaaac tcgcgcccat cgtattgatc gtcataattt
    12241 gaccgactaa gccactcgtt cccatgcctg cccctgctgc attgttcgtc attgggaaga
    12301 gaaccgtcat gattggcgcg ataatagcac tcgctaatgt aggtggcacg ataatgagtg
    12361 gttttaacaa tatattcggc acttgtaaca tacttgtccc gagaccaatt gaaatgatgc
    12421 cactcacgcc attttcttta taactcgtca ctgcaaaacc aatcatttga caagcacaac
    12481 cgatcgtcgc tgcaccggct gctaatcctg ataaatctaa cattaatgcc agtgctgcac
    12541 tggaaatcgg tgccgttaaa cataaaccaa agatgactgc tacaagaata cccatcacaa
    12601 aaggttgttg atccgtagaa atcattatca cttttccgat ttctaacatg agttgactta
    12661 acaccggacc taaaaatttg gccactaaac cacctatcat taatgtcagt agaggtgtga
    12721 caatgatatc aattttcgtc ttggctgcat aaagctgact taattccaca gcgataagta
    12781 ctgcaaaaaa cgcccctact gcaccacctg aaaacgtctc ataaccgagc ataccaacaa
    12841 tgactgcagc aaaaatcacg agcggtttcc ctttcaaacc atatgcaatc gccgccccaa
    12901 tcgctgcccc tgttaaactt tgtgcaactt ttccaacttc aactaaaaat tctaagtgaa
    12961 ggcttgggaa taacgtttgc ttaccaatcg tttgcataat taatccgata atgagtgaac
    13021 tgaaaagccc aagtgtcata taactgagac catcgatgaa ccaacgatag agtaattttt
    13081 tcactgagtt gaacacttcc aatctttgtt attttgtttt tataaatttc atattaacat
    13141 aacatttggg atattttgca aactaggttt aaagccaaag cattacagga aaaagtttat
    13201 attgagtatg ataaagtgaa agctgatagt tgggatagac gtaatatgcg tgttgaattt
    13261 aatcctaaca aattaacgaa atatgaactt ttttggctga aacgtaatat tattgactac
    13321 atggacgatg ttaggtttac acggatagat ttagcttttg attttaaaca tgatttgagt
    13381 gattactatg cgatgtctga taaagcatta aagaaaactg tgttttatgg acgtaatggt
    13441 agcatggaaa ctaagtattt tggtgttcgt gatagtgata gatttattcg aatttacaat
    13501 aaaaaacaag aacgtaaaga taatgcagat attgaaattc attcagaaca cttgtggcgt
    13561 gttgaaattg aactcaaacg aaacatggtt gattattgga acgactgttt caatgacttg
    13621 cacatcttac aaccaaattg gaccctgtta aaaaagggaa acgaacaagc aatggtttat
    13681 atgttaattc atgaagaggg caaatgggga gagttaaata aacgaactaa atataaatac
    13741 aagaaattaa ttaaagaaat atctccgatt gatttaactg atttgatgaa aatgactttg
    13801 aaagaaaacg aaaaacaatt acaaaagcag attgattttt ggctttctga ttttcagttt
    13861 taagtgaatt taattttata ctgtgaacaa aaaagcaaac agattataag ttttacgcta
    13921 ttaaggccat agtattaaag gcatagtttt ttgctatgct tacggtgaaa ataggtttgt
    13981 tatatgagta gagagaagga gatgattaca tgttatacga tgtatttaat ggtaatgcat
    14041 cagcacaaca aattgctagt caaattggag gagatttagt aaaaagattt gccccaaata
    14101 ctgatgttgg aggtttaatc aactcattaa ctattaaaat taatgctact gatggatttg
    14161 cttggacaga tcttgcaggt gttatttctg atattgctgg atttattgca agttacatac
    14221 ctcaagctaa agtagttaca atagcaactg cactttggga ttattcttca ttactttaaa
    14281 agtgatattt aaactgttca ttttgataaa gtgtgatttt aatctgttgt taaaatcata
    14341 ctttgtcttt aattcattaa aataaaaaag tggggattct attggcaatg tttcgtgaaa
    14401 cctttgtatg ggtcatactt ttacttttca atttaataaa tacgatttta ttattatcgg
    14461 gaaaaaaatt actatttagc gttcctctat gggttacttg gtctctatgg ggtgttatta
    14521 catttataat tattggatta gttgttttta gaaaagtgat gcaaaataaa tattcttctt
    14581 taaatacgag tgcaagatca tcaattcaat tagataa
//
LOCUS       DANHPA010000065        14273 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.065, whole genome shotgun sequence.
ACCESSION   DANHPA010000065 DANHPA010000000
VERSION     DANHPA010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 14273)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14273)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14273
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.065"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            342..797
                     /gene="ureE"
                     /locus_tag="PTC28_001574"
     CDS             342..797
                     /gene="ureE"
                     /locus_tag="PTC28_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreE"
                     /protein_id="HDK5716857.1"
                     /translation="MIVEEIQGNIANLSQEDKNIHIEKVYLENSDLVKRIQRVTSDHG
                     TEIGIRLSQPIDLQYGDILYRDDKNMIIIDVNSEDIIAIKPRTMKEMGDIAHQLGNRH
                     LPAQFTDDNEMLVQYDYLVEDLLKGLSIPYQREERKVNQAFKHIGHSHD"
     gene            790..1482
                     /locus_tag="PTC28_001575"
     CDS             790..1482
                     /locus_tag="PTC28_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreF"
                     /protein_id="HDK5716858.1"
                     /translation="MINQAYLKLFQFCDSQFPTGAFSHSFGLETYIQRGDVHDGASFQ
                     AWLEVFLKEQLTYTDGLAMRLVYEAIEANDTAAIERLDQLLFVQNIPRETRNGTKQMG
                     KRMIQLARMIYHEDQWLDWYGEKAAAYELHTHPAVVFTLLGYHLGIEIEKIIDYYYYQ
                     NVSSLTQNAVRAIPLGQTEGQTIVADMIPFITTTREGVMQLDEADFGLTAPGIEMNQL
                     EHENVDVRIFIS"
     gene            1495..2106
                     /gene="ureG"
                     /locus_tag="PTC28_001576"
     CDS             1495..2106
                     /gene="ureG"
                     /locus_tag="PTC28_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreG"
                     /protein_id="HDK5716859.1"
                     /translation="MKPIKIGVGGPVGAGKTQLIEKLVKRLSEEKSIGVITNDIYTKE
                     DQKILVNSGVLPEDRIIGVETGGCPHTAIREDASMNFAAIDELMERHSDIELIFIESG
                     GDNLAATFSPELVDFSIYIIDVAQGEKIPRKGGQGMIKSDYFVINKTDLAQYVGASLE
                     RMAEDTEKFRKNRPFAFTNLKTDEGLDDVLNWIKKDIFFEGLA"
     gene            2106..2939
                     /locus_tag="PTC28_001577"
     CDS             2106..2939
                     /locus_tag="PTC28_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreD"
                     /protein_id="HDK5716860.1"
                     /translation="MAISKWTGELDLTFKHDGRRTVNGKTYFQGGLKVIRPTYLNGSP
                     HPTMFLINLGGGFVDGDRYRMTVHFEPRTHAILTTQGATIVFKTLEDKVEQYQTFQLD
                     DESFMEFISDPIIGYSEAKFYQVNQFHLSPTASMFYTDILTPGYDKEGRQFNYHYLHL
                     KNEIYVDEKLVVFDNLKLDTQKNKVTHMGYMEGFTHMASCFYISPGVNQKVVEAVQEV
                     VTPYIDEHCRVGVTLLPTHGLTFRILAYSTDVIQRVIHAVHQYVMETYHEEDAQFLRK
                     Y"
     gene            complement(3625..5868)
                     /gene="metE"
                     /locus_tag="PTC28_001578"
     CDS             complement(3625..5868)
                     /gene="metE"
                     /locus_tag="PTC28_001578"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002437223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HDK5716861.1"
                     /translation="MMTIKTTNLGFPRLGHKREWKKAIESYWNNKITKAELDDTLQQL
                     HRSNLVLQQNYNLDSVPVGDFSLYDHILDTSLLFNIIPTRFQDRDVDDDLLFDIARGN
                     KSHVASALVKWFNTNYHYIVPEWDNVTPRVNRNRLLERFNEAKALNINAHPVIVGPVT
                     FVALSKGGDQSFEDKVRTLLPLYVEVLQSLIDAGAELIQIDEPILVTDKAAELEAITR
                     EAYEAFAEADVAKSLVIQTYFERANVKFLSALPVKGLGLDFVHDRGYNLQQIENGDFD
                     RSKTLFAGIIDGRNVWAADVEAKKALIEKLSQYSDDLYINPSSSLLHVPVSLEDEVLE
                     DDIRDGLSFATEKLETLDALKRAVNDNDTEAYDRLHAQYIRFQSQAFKNLEYDFESVR
                     AKRASAFSERKVVQQQRLNLPDLPTTTIGSFPQSPEVRKQRADWKNNRITDEAYRQFV
                     QDEIKRWIEIQEDIGLDVLVHGEFERNDMVEFFGEKLDGFLVTKFGWVQSYGSRAVKP
                     PIIYGDVKWTAPLTIDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDIPRSTVQDQI
                     ALAINEEVLALEKAGIQVIQVDEPALREGLPLRKEYHEDYLVKAVHSFKLATSSVTDE
                     TQIHTHMCYSQFGQIIHAIHDLDADVISIETSRSHGDLIKDFEDIDYDLGIGLGVYDI
                     HSPRIPTEEEITTAIERGLQQIDRSLFWVNPDCGLKTRKEDEVKAALTVLVNSARKLR
                     QEAVEAN"
     gene            complement(5862..7703)
                     /locus_tag="PTC28_001579"
     CDS             complement(5862..7703)
                     /locus_tag="PTC28_001579"
                     /EC_number="1.5.1.20"
                     /EC_number="2.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001831351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional homocysteine
                     S-methyltransferase/methylenetetrahydrofolate reductase"
                     /protein_id="HDK5716862.1"
                     /translation="MSRLLNALKNNILVADGAMGTILYSEGLDTCPEAYNLTHPDKVE
                     SIHRSYIQAGADVIQTNTYGANFEKLQQFGLEHQVKAIHQAAVAIAKRAAGPDTFILG
                     TVGGFRSTKQGELSLSAIQYHTDIQVDTLVAEGVDGLLFETYYDDEELLNAIKQTRQK
                     YDIPIIAQLTASNTHYLVNGKEINSALQQLVEAGADIVGLNCHHGPHHMKRTFGHIEL
                     PDNAYLSCYPNASLLDIDQQTFKYSDNAQYFGETAEQLIQEGVQLIGGCCGTTPEHIR
                     KIKAAVQGLKPIKEKKVIPIHQKPTSEAPKPTRQNLAMRVRERPTIIVELDTPKHLDT
                     TKFFQNVKALDDAQIDAVTLADNSLATVRVSNIAAASLIKQQFNIEPLVHITCRDRNL
                     IGLQSHLLGLSLIGVNEILAITGDPSKVGHLPGATNVYDVNSKGLTELALRFNKGVNT
                     DGDTLKVATQFNIAGGFDPHVSNIKAAVRKMETKIKSGMHYFITQPVFTKEKIVEIYE
                     ATKHLDVPIFIGIMPITSYKNALFLHHEVPGIKMSDDVLAQFEAVANDRQATYELSLS
                     LCKSLIDTVHTYFNGLYLITPFERIDYSLELAAYSKSITTSHQEAIL"
     gene            complement(7657..8832)
                     /locus_tag="PTC28_001580"
     CDS             complement(7657..8832)
                     /locus_tag="PTC28_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDK5716863.1"
                     /translation="MTRSKQTELIHDTQRGVAYQCANQPLYYASTYHQQRLGEAVPYD
                     YARSGNPNRELLERKLAQLEGGKRAFAFNSGIAAITAVFLTLKAGDHVILPDDVYGGT
                     FRLTEQILSRFGLTFTTVNAENAAEIRAAIRPNTRLIYVETPSNPLFKITDIRKVVHI
                     AQAHDILVAVDNTFMTPLCQNPLALGANIVIHSATKFLGGHSDLIAGAVITNDDTLAE
                     ALYLIQNGTGTALSVYDSWTLTQHLKTFVVRYEQSVKSAQQIYHFLEAHPAIAQVYYP
                     GDNSVHLSQAKHGGAVIGFRLRDETYAQRFVDQLTLPLVSVSLGGVETILSHPYTMSH
                     AAIPQEIREARGITFGLFRLSVGLEDADELIADLDQALKEGSYESTTERTEKQYSRR"
     gene            complement(8819..9931)
                     /locus_tag="PTC28_001581"
     CDS             complement(8819..9931)
                     /locus_tag="PTC28_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HDK5716864.1"
                     /translation="MKATTLAQIALTQDNTGAIANPIYLSTAYQHEGLGLSTGFDYTR
                     TKNPTRQAFEDAFARLEGGIASFATASGMASVQLVCNLFKPGDEILVSFDLYGGTFRL
                     FEFYETQYGIHFHYIDFENPDAVKAAITPKTKALFIEPISNPLMIEIDLTPYYDIAAE
                     HALLTIVDNTFLTPYLSTPLLDGADIVLHSATKYIGGHNDVLAGVVTVKDAVLAEKLG
                     QFHNMIGATLSPIDSYLLLRGLKTLHLRVERSQQNAQRFAATCEDLTGIQDVLYCGRT
                     GMLSLRLEPGYSVDQLLRQLKVLRFAESLGGTETFVTFPYTQTHIDMPDEEKDRRGID
                     QHLIRLSIGIEAYEDIEQDFIQALEKSKEVSTDDTF"
     misc_binding    complement(9996..10310)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            10496..11320
                     /locus_tag="PTC28_001582"
     CDS             10496..11320
                     /locus_tag="PTC28_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HDK5716865.1"
                     /translation="MTEKWQSQQNDSEQVQRLALTEIRPNPYQPRKTFDAEKLTELAQ
                     SIAQHGVLQPIIVTQAIKGYHIVAGERRYRASLEAGLTDIPAIVKPFSDGEMRELAII
                     ENLQREDLNALEEAESYQQLMQHLTLTQQEVAARLGKSRPYIANMLRLLKLPVKIRTL
                     IREGQLSGGHGRTLLALKTPETMVHYAKLAIRESWSVRYLEQRVAEHTGSTQQATTRQ
                     QHTMKKPALIRQHEQQLKEQYGTSVEITTKKNVGEITFTFHSESDYRRLIQLLKNM"
     gene            11386..12276
                     /locus_tag="PTC28_001583"
     CDS             11386..12276
                     /locus_tag="PTC28_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HDK5716866.1"
                     /translation="MNQLEAILKSMVQPLLDPETYSNLLTKLIIVLIYVLAAFIVVRI
                     LNKVIAQFFKVNNRSGKSTRAKRSKTLITLVQNVVGYIVWFITLTTVLSKFGISVESI
                     LAGAGVVGLAIGFGAQTLVKDVITGFFIIFENQFDVGDYVSIKNNSAPIAEGTVKSIG
                     LRSTRILSFTGELSIIPNGTMSEVTNFSVTNGVSIIDIPVSIHEKIDDVEKKMNLFLK
                     TIPKKYDIFIEPPEVLGVDKFNSYEVMIRVAGETLPGESFGGSRILRRELKEFLQSEG
                     IEAPMPTLVQLYQEQQNKEA"
     gene            12289..12510
                     /locus_tag="PTC28_001584"
     CDS             12289..12510
                     /locus_tag="PTC28_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF951 domain-containing protein"
                     /protein_id="HDK5716867.1"
                     /translation="MASNYELNDIVEMKKQHACGTNRFKIIRMGADIRIKCENCQRSI
                     MLPRQTFNKKIKKVLEKASSNEKENETWL"
     gene            12501..13598
                     /gene="ychF"
                     /locus_tag="PTC28_001585"
     CDS             12501..13598
                     /gene="ychF"
                     /locus_tag="PTC28_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019469841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HDK5716868.1"
                     /translation="MALTAGIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIV
                     EVPDTRLTQLEAIVNPKRTVPTTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQ
                     VVRAFDDENVTHVAGRVNPIEDIEVINMELVLADLESVEKRLPRLEKMAKQKDKTAVN
                     EVRILTRIKETLENGQPVRSLEFNDEDQKYVNQAQLLTSKSMLYIANVGEDEINDVEN
                     DKVKAIREYAAQEDSEVIVISAKIEEEIATLDEEDKAMFLEELGIEEPGLNRLIRKTY
                     DLLGLATYFTAGVQEVRAWTFKEGMTAPQCAGIIHTDFERGFIRAEVTSYEDFVAHNG
                     EQGAKEAGKMRLEGKDYIMQDGDVVHFRFNV"
     gene            13823..>14273
                     /locus_tag="PTC28_001586"
     CDS             13823..>14273
                     /locus_tag="PTC28_001586"
                     /inference="COORDINATES: protein motif:HMM:NF024502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage integrase SAM-like domain-containing
                     protein"
                     /protein_id="HDK5716869.1"
                     /translation="MKKKRNKAYQKLDNLSIEFIKKEVMDYKKSQNLAPKTLEIYKRL
                     FTEFYEFFGKDIDILMINQRQASAFINYLLNDKVYYLDRFNNSGEMRGIQPTTVNTYL
                     KACKSVYQTLIDLEYIEVNPFQKLKTVKRQNEEGDGANFHLTNDNLVF"
BASE COUNT         4281 a         2645 c         3103 g         4244 t
ORIGIN      
        1 ctgagttgca tcactttatt caaaaagtaa aaaggactgc ttttttatga gtgtgaacga
       61 tataagtggg acataatgtt aaagattctg ttggtcaatt gcttacgttt caatgctgaa
      121 atatgataaa gtattaagta actaaacatc gaactttgtt ttttcatggc gagtatagag
      181 cgatatgtta tcattgaata atatttggtc gttgatagta cttctaggca aattactaaa
      241 tgagacacat tgaccaacta tctagtttgc tagaaatgta cacgtcatga aagaggcatt
      301 cattggtgtg atttatcgct attcaaggag atgacagaga tatgatagta gaagaaattc
      361 aaggtaacat cgccaattta tctcaagagg acaaaaacat acacattgaa aaagtatact
      421 tagaaaactc agatttagtg aagcgtattc agcgtgtcac gtcagatcat ggcactgaaa
      481 tcgggattcg tctgagtcaa ccgatcgact tacaatatgg agacatttta tatcgtgatg
      541 ataaaaatat gattattatt gatgtgaatt ccgaagatat tattgcgatt aaaccacgta
      601 cgatgaaaga gatgggggat atcgcacatc aacttggtaa tcgtcacttg ccagctcagt
      661 ttacagatga taatgaaatg ttggtacagt atgattactt agtagaagat ttattgaaag
      721 gactcagtat tccttatcag cgtgaagaaa gaaaggtcaa ccaagccttt aaacatatag
      781 gacattctca tgattaatca agcctattta aagctttttc aattttgtga ttctcaattt
      841 ccgacaggtg cgttcagtca ttctttcggg ttagagacgt atattcaacg tggagatgtt
      901 catgacgggg cttcatttca agcttggtta gaggtatttt tgaaagagca acttacatat
      961 acagatggtt tggcgatgcg tctcgtgtat gaagcaatcg aagcgaatga tacggcagcg
     1021 attgagcgac tagatcagtt gctgtttgta caaaatattc cgcgagaaac gagaaatggg
     1081 acgaaacaaa tggggaaacg aatgattcag cttgcgcgta tgatttacca tgaagatcaa
     1141 tggttggact ggtacggtga aaaggccgca gcatatgagt tgcataccca tccggcagtc
     1201 gtgtttacgt tgttaggcta tcacttaggg attgaaattg aaaaaattat tgattattac
     1261 tactaccaaa atgtttcaag cttaacacaa aatgctgtgc gtgcgatacc gttagggcaa
     1321 acagaaggac aaacaatcgt agctgacatg attccattta ttacgacaac acgtgagggc
     1381 gtgatgcaat tggatgaagc ggattttggt ttgaccgcac ctggtatcga gatgaatcag
     1441 ttggaacatg aaaatgtaga tgtacgtatt tttatttcat aggaggaatg gagcatgaaa
     1501 ccgattaaaa ttggtgtagg tggacctgtt ggcgcgggga aaacacaact tatcgaaaaa
     1561 cttgtaaaac gtctatctga ggagaaaagc attggcgtta ttacgaatga tatttataca
     1621 aaagaagacc aaaaaatctt agttaactca ggcgtgttgc cagaagaccg tattatcggt
     1681 gtggaaacag ggggttgccc gcatacagcg attcgtgaag atgcttccat gaacttcgcg
     1741 gcgattgatg aactcatgga gcgtcattca gatattgaac tgattttcat tgagtctggt
     1801 ggcgacaact tagcagcaac attcagtcca gaactggttg atttttcaat ttatattatt
     1861 gacgtcgcgc aaggtgaaaa gattccgcgt aaaggtggtc aaggcatgat taaatctgac
     1921 tactttgtga ttaataaaac agatttagcg caatatgtag gggcttcatt agaacgtatg
     1981 gctgaagata cagagaaatt ccgtaaaaat cgtccgttcg catttacaaa cttaaaaacg
     2041 gatgaaggtt tagatgatgt gttaaattgg attaaaaagg acatcttttt tgaagggtta
     2101 gcgtaatggc aatttctaaa tggacaggtg agttagattt aacctttaaa catgacggta
     2161 gacgtactgt aaatgggaaa acgtatttcc aaggtgggct taaagtcatt cggcccactt
     2221 atttaaatgg aagtcctcat ccgacgatgt ttttgattaa cttaggcgga ggattcgtgg
     2281 acggtgaccg ataccgcatg actgtccact ttgagccacg tacgcatgcg attttaacga
     2341 ctcaaggtgc gacaattgtt tttaaaacat tggaagataa agtcgagcag taccaaacgt
     2401 ttcaactcga tgacgaatca tttatggaat ttattagtga tccgattatt ggttattcag
     2461 aggcgaaatt ctatcaagtc aatcaattcc atttgagtcc gactgcttcg atgttttata
     2521 ccgatatttt aacaccaggt tatgataaag aagggcgcca atttaattat cattacttac
     2581 acctcaaaaa cgaaatttat gtggatgaaa aactggtcgt atttgataat ttgaagttag
     2641 atacgcagaa aaataaagtg acgcatatgg gctatatgga agggttcaca catatggctt
     2701 cttgttttta tattagccca ggtgtcaatc agaaagtcgt tgaagcggta caagaagtgg
     2761 tgacacctta tatcgatgaa cattgtcgtg tcggtgtgac attgcttccg actcatggtt
     2821 taacatttcg tattttagcc tattctacag acgtcattca acgtgtcatt catgctgtac
     2881 atcaatatgt tatggaaacg taccatgaag aagacgcaca atttttaaga aaatattaaa
     2941 gtaatggaat acattatata aaaagcttct ttcctcaatt gaaatgggaa gagaagcttt
     3001 ttgtgttgta tggaagtctc gagggggtct taaaacaacc atttttctat atttgtcctc
     3061 tttgatatga atgatgcctt ttgcgattgc ctctatggat tcgcgttccc aggggacttg
     3121 cctcaactaa atttggcttt ttaaattgta catttgatag aagccaaatt ggattttggg
     3181 agcagtacag aaatcgcatg tgtcacaaag atttcgtcgt actgcccccg caaggatgac
     3241 tagacttctc aaaagtatat gcattgagaa gtcagacagc tactgcgtta aacagtagcc
     3301 actatcaaag ttaaatgacg ttattttgtt ttcaacttca tccctcggga gtctcatcca
     3361 ctttggcaat cttgcattta aatcatgaat caatgaagac aagtttttgt aattaagcaa
     3421 atccaaacat catatgacaa attaagctga attgatggat tattttaata caacttatac
     3481 acataaaaaa ataggaaagg ttgagaaaca aatgtctcaa cgtctgtcct attttttatt
     3541 gaagatgatt gtgttctcaa tggcgagtat aatcgaaaga cttcaatctc attgctctct
     3601 ggctttgaaa gcgtgtcctt actattaatt cgcctcgaca gcttcttgac gtaatttgcg
     3661 tgcgctattc accaacactg tcaatgcggc tttcacttca tcttctttac gtgttttgag
     3721 accacagtct ggattgaccc agaataatga acggtcgatt tgttgtaaac cacgttcaat
     3781 tgctgtcgta atttcttctt ctgtcggaat acgtgggcta tgaatgtcat aaacgcctag
     3841 accgatacct aaatcataat cgatgtcttc aaagtcttta atgaggtcac catggctacg
     3901 agaggtttcg attgaaatga cgtctgcatc taagtcgtga atcgcatgga tgatttgtcc
     3961 aaattgcgaa tagcacatat gtgtatgaat ttgtgtttca tccgtcacag aagatgtcgc
     4021 aagtttgaag ctatgcacgg cttttactaa gtaatcttcg tggtattctt tccgcaatgg
     4081 taagccttca cgcaatgctg gttcgtcgac ttgaatcact tggatgcctg ctttttctaa
     4141 cgctaacact tcttcattaa tcgcaagcgc aatttgatct tgaacggttg agcgagggat
     4201 gtccacgcgt tcgaacgacc agtttaagat ggttacaggg cctgtcagca tccctttcac
     4261 tggcttgtcc gttaagcttt gtgcgtatac ggtttcatca attgttaatg gtgctgtcca
     4321 ttttacatct ccgtaaatga ttggaggttt taccgcacgt gagccgtatg attgtaccca
     4381 gccaaatttc gttacgagga agccgtctaa cttttcacca aaaaattcaa ccatgtcatt
     4441 acgttcaaat tcaccgtgaa caaggacgtc taaaccgata tcttcttgaa tttcaatcca
     4501 acgtttaatt tcatcttgta cgaattgacg gtacgcttca tcagtaatac ggttattttt
     4561 ccaatctgca cgctgtttac gcacttctgg tgattgtggg aatgagccaa tcgtcgttgt
     4621 cggtaaatct ggcaagttta aacgttgctg ttgcacgact ttacgctcag agaaagctga
     4681 agcacgtttc gcacgaacac tctcaaagtc atactcaagg tttttgaagg cttggctttg
     4741 gaaacgtata tattgcgcat gtaatcggtc atatgcttca gtatcgttgt cattcacagc
     4801 acgtttcaat gcatccaacg tttctaattt ttctgtcgca aagcttaaac cgtcacggat
     4861 gtcatcttcc aacacttcat cttctaatga aacagggacg tgtaataatg aagaagatgg
     4921 gttgatatat aagtcgtcgg aatattggga taatttttcg attaaagctt tcttcgcttc
     4981 aacatctgca gcccatacat ttctaccgtc gatgataccc gcaaataatg tttttgaacg
     5041 gtcgaagtcg ccattttcga tttgttgtaa attgtagccg cgatcatgta caaagtctaa
     5101 tccaagccct ttgactggta atgcgcttaa aaacttcaca tttgcacgct cgaaatatgt
     5161 ttgaatgact aacgattttg cgacgtcagc ttccgcaaat gcctcgtaag cttcacgtgt
     5221 aatggcttct aattcagccg ctttatctgt cactaaaatc ggttcgtcaa tttgaatgag
     5281 ttctgcccct gcatcgataa gtgattgtaa tacttcaacg taaagtggta ataacgtacg
     5341 tactttgtct tcaaatgatt gatcgccacc tttagaaagt gctacgaatg tcacagggcc
     5401 aacgatgaca gggtgtgcat taatattgag cgcttttgct tcattaaaac gttctaataa
     5461 acggttacgg ttcacgcgag gtgtcacatt gtcccattca ggtacgatat agtgatagtt
     5521 tgtgttaaac cattttacga gtgcgcttgc gacgtgggat ttgttaccgc gtgcgatgtc
     5581 gaaaaggaga tcgtcatcta cgtcacggtc ttggaaacgt gtcgggataa tattaaacaa
     5641 taaggatgta tccaaaatgt gatcatataa tgaaaaatcg cccactggta cgctatccag
     5701 attgtagttt tgttgtagta ctaagttcga acggtgcaat tgttgtaacg tgtcgtctaa
     5761 ttcagctttt gtgattttgt tgttccagta gctttcaata gcttttttcc attcacgttt
     5821 gtgtccaagt cttgggaatc ctaagtttgt tgttttaatt gtcataatat cgcctcctga
     5881 tgggatgttg taatagattt tgaataagct gcaagttcta atgagtaatc aatacgttca
     5941 aatggtgtaa ttaaataaag accattgaaa tacgtatgga cggtgtcgat aagtgatttg
     6001 caaagggaca ggctcagttc atacgttgct tgtctatcat tcgcaacagc ttcaaactgt
     6061 gcgagtacat cgtctgacat tttgatacca gggacttcat gatgtaaaaa caatgcattt
     6121 ttgtaactcg taatcggcat aatcccaatg aaaataggga catcgagatg ctttgtcgct
     6181 tcgtaaatct cgacaatttt ttcttttgtg aagactggct gtgtaataaa gtaatgcatg
     6241 ccacttttaa tctttgtttc cattttacgt acagcagctt tgatgttgct tacatgtgga
     6301 tcaaaaccac ccgcaatgtt gaactgtgtg gcgactttta atgtatcgcc gtctgtattc
     6361 acccctttat taaatctaag tgcaagttcg gttaatcctt ttgaatttac gtcgtacaca
     6421 tttgttgcgc cggggagatg accgactttc gaagggtctc cagtaatcgc taaaatttca
     6481 tttaccccga ttaacgataa accgaggagg tgagattgga gtccaattaa gtttcgatct
     6541 cggcacgtaa tgtggacgag tggctcgatg ttgaattgtt gtttgattaa actcgcggct
     6601 gcaatattcg atacgcgaac cgtggctaaa gaattgtccg ctagcgttac agcgtcaatt
     6661 tgtgcgtcat ctagagcttt gacgttttgg aaaaatttcg tcgtatcgag atgtttgggt
     6721 gtatcaagtt cgacgatgat agtcggtcgt tctcgtacac gcattgccaa attttgacgt
     6781 gttggcttcg gtgcttctga cgttggtttt tgatggatcg gaatcacttt tttctctttg
     6841 attggcttta acccttgcac tgctgcttta attttacgaa tatgctcagg ggttgtacca
     6901 caacagccac cgataagctg gaccccttct tgaatgagtt gctccgcggt ctcaccaaag
     6961 tattgcgcgt tgtcactata tttaaaggtt tgctgatcga tatcgagtaa gctcgcattc
     7021 ggatagcacg acaagtaagc gttgtctggc aattcgatat gaccaaaagt acgtttcata
     7081 tgatgtgggc cgtggtgaca attcaacccg acaatgtctg cacctgcttc gaccaattgt
     7141 tgtaatgcgc tgttgatttc cttaccattc actaaataat gtgtgttgga agcggtcagt
     7201 tgtgcaataa tcggaatgtc atacttttgt cgtgtttgct taatcgcatt cagtaattct
     7261 tcatcatcgt aatatgtttc gaataacagg ccatcgacac cttcagccac gagtgtatcg
     7321 acttgaatgt cagtatgata ttgaatggct gacagtgaca gttcgccttg ttttgtactt
     7381 ctaaagccac caaccgttcc taagatgaat gtgtcaggtc ctgcagcgcg tttagcaatg
     7441 gctacagcag cttgatgaat cgctttgact tgatgttcca atccgaactg ttgtaacttt
     7501 tcaaagttgg caccgtatgt attcgtttga atgacatctg cgccggcttg aatatacgac
     7561 cgatgaatgc tttcaacttt gtcaggatgc gtcaaattgt aagcttcagg acaagtgtct
     7621 aagccttctg agtataaaat cgtccccatc gcaccatcag cgacgagaat attgtttttc
     7681 agtgcgttca gtagtcgact cataggatcc ctcctttaat gcttgatcga ggtcagcgat
     7741 taattcgtca gcatcttcca acccaacact caatcgaaat agtccgaacg taatgccacg
     7801 cgcttctcga atctcttgag ggatggcggc atgtgacatc gtataagggt gtgaaagaat
     7861 cgtttctaca ccgccgagac tgactgagac gagtggtaaa gtgagctgat cgacaaatcg
     7921 ttgcgcataa gtttcatctc ttaaacggaa gccgataaca gcccctccgt gttttgcttg
     7981 gctgaggtgt acgctattgt ctcctggata gtacacttgc gcaatcgccg gatgtgcttc
     8041 taaaaaatga taaatctgtt gtgcactttt gacagattgt tcataacgga cgacaaatgt
     8101 ttttaggtgt tgtgttaacg tccaactatc ataaacggac aaagcagttc ctgtgccgtt
     8161 ttgtattaaa tacagtgctt cagcgagtgt gtcatcattt gtaatgactg cccctgcaat
     8221 gagatcgcta tggccgccta aaaacttcgt cgcgctatga atgacgatat ttgcaccgag
     8281 cgccaatgga ttttggcaaa gtggcgtcat aaacgtattg tccaccgcta ctaaaatgtc
     8341 gtgtgcttgg gctatatgaa cgacttttcg aatatctgta attttgaaca gcgggttcga
     8401 cggtgtttct acatagatga gccgtgtatt ggggcgaatc gctgcacgaa tttctgccgc
     8461 attttcagca ttcactgttg taaatgtcag gccaaagcgc gataaaattt gctctgtaag
     8521 tcgaaacgtc ccaccataca catcatccgg taaaatgacg tggtcacctg cttttaaagt
     8581 taaaaataca gccgtaatcg cggcgatacc agagttgaat gcgaacgcac gctttccgcc
     8641 ttccagttgt gcgagttttc tttcgagtaa ttcgcggtta ggattgccac tccgcgcata
     8701 atcataagga acagcctcgc ctaatcgttg ttggtgatac gtcgatgcat aatatagcgg
     8761 ttgattggcg cattgatacg cgacaccacg ttgtgtatca tgaatcagtt cagtttgttt
     8821 agaacgtgtc atctgtgctc acctcttttg atttttcgag tgcttgaatg aaatcttgtt
     8881 caatatcttc gtaagcttca ataccaatcg aaagtcgaat taagtgttgg tcaatgccac
     8941 gacgatcctt ttcctcatct ggcatatcga tgtgcgtttg tgtataaggg aaagtgacaa
     9001 aagtttctgt gccacccaaa ctttctgcaa aacgcaatac tttcagctgt cgcaacaatt
     9061 gatcgacgct ataaccaggt tcgagacgta aacttaacat gcctgttcgt ccgcaataga
     9121 gcacgtcttg gatgcctgtc aaatcttcac atgtagctgc aaatcgttgc gcattttgtt
     9181 gtgaccgttc gacgcgaaga tgcaatgtct ttaatccacg taacaataag taactgtcaa
     9241 tcggtgaaag tgtcgcacca atcatgttgt gaaattggcc taacttttct gcaaggactg
     9301 catctttcac agtgacgacg ccagcaagga catcattgtg cccaccgata tatttcgtcg
     9361 ctgagtgtaa cacgatatct gcaccatcga gtaaaggtgt cgacaaataa ggtgtgagaa
     9421 atgtattgtc gacaatcgtt aataacgcgt gctctgctgc tatgtcataa taaggtgtca
     9481 aatcaatttc aatcatcaac ggattcgaaa tcggttcaat aaataaggct ttcgttttcg
     9541 gtgtgatggc agcctttaca gcgtctggat tttcaaaatc gatgtagtga aagtgaatac
     9601 catattgtgt ttcgtaaaat tcaaatagtc gaaatgtgcc gccgtataag tcaaacgaga
     9661 caagtatttc atcaccgggt ttgaaaaggt tacagaccaa ttggacgctc gccatgccac
     9721 ttgccgtcgc aaatgatgcg ataccgcctt caagtcgcgc aaatgcatct tcaaaagctt
     9781 gtcgcgtcgg gtttttagtt cgtgtgtagt caaatcccgt tgatagtccg agtccttcat
     9841 gttggtatgc cgtagagaga taaattggat ttgcgatagc accagtgtta tcttgagtca
     9901 acgcaatttg tgccagtgtt gttgctttca tcagttcaac ctcctcttca aaaataaaaa
     9961 agcttccgtc ctttagatcc aataagatat tagatataaa ggacgaaagc ttgttcgtgg
    10021 taccaccttt gttcgtgaca tgattgctca aatcacctct tccagtacgc gaaattgtgt
    10081 gcacagtaaa gcgtatgata gatacggaat gtgagggata tctttggaat actttaccgt
    10141 gccacaaaat gtgaatactg agtcgctata acgggcgaac ccggtgatac ctcatatcgg
    10201 taccaacact ccaaggccat tttcaaacgt gctttcaata ccttctctca gcgaacgaag
    10261 gctctctgta aatgcagggg acgttttact ttccttttta tagtgtttag tcgtatgacg
    10321 ttgtactttg ataaaacaca ctttacacga agtcaaaaag gttgtcaaca tgttttctga
    10381 aaatttagaa gagaaagaaa ttgtacatct gccaaaatca tggagaaaag cttgtgtctc
    10441 aatggtgcaa acagtaaaat ggaatggtaa aaaatttgaa aggttggtga gaaggatgac
    10501 tgaaaaatgg caaagtcaac aaaatgattc cgagcaagtt caacgactgg cattgacgga
    10561 aattagaccg aatccgtacc aacctcgcaa aacgtttgat gctgaaaagt taacagaact
    10621 tgcgcaatcg attgcacagc atggcgtgtt gcagcccatt atcgtaacgc aagcgatcaa
    10681 agggtatcat atcgtagcgg gtgaacgccg ttaccgggca agtcttgagg caggcttaac
    10741 ggacatccca gctattgtta aaccattttc agatggtgag atgcgcgaac tggcgattat
    10801 cgaaaactta cagcgtgaag atttaaatgc attagaagag gcagaaagtt atcaacagct
    10861 aatgcaacat ttgactctga cacaacaaga ggtcgcggca cggttaggca aatcaagacc
    10921 gtatatagcg aatatgttga gactacttaa gttacctgtt aagattagga ctttaataag
    10981 agaaggccaa ctttcaggcg gacacgggcg cacactactc gcactcaaaa caccggaaac
    11041 gatggtacac tacgcaaagt tagccatccg ggagtcttgg agcgtgagat atttggagca
    11101 acgcgtcgct gaacatacag gcagcacgca acaagcgacc acgcgtcaac agcatacgat
    11161 gaaaaagcct gcactgattc gccaacatga acaacaatta aaagaacaat atggtacaag
    11221 tgtagaaatt acgacgaaga aaaacgtagg cgagattact tttacattcc actctgaaag
    11281 tgactatcgc agactgattc aattgcttaa aaacatgtga tggcgaaaag ggcacaggca
    11341 tcaacataca tcactcaaaa tgatgcatag agaagggagt tacttatgaa tcaattagaa
    11401 gcgatattaa aaagtatggt tcaaccgtta ttagacccag aaacatattc caacctttta
    11461 acgaaattga ttatcgtttt aatatatgtg ttggcggctt ttatcgttgt tcgtatttta
    11521 aacaaagtca tcgcacaatt ttttaaagtc aacaatcgtt caggtaaatc aacacgtgcg
    11581 aaaaggtcaa aaacattgat tacacttgtt caaaatgtcg ttggctatat cgtatggttt
    11641 attactttga caacagtatt gagcaaattt ggcattagtg ttgaaagtat tttagcaggg
    11701 gccggcgttg taggtttagc aattggtttt ggtgcacaaa ccctcgtgaa agacgtcatt
    11761 acaggatttt ttattatatt tgaaaatcag ttcgatgtcg gggactatgt gagcataaaa
    11821 aacaacagtg caccgattgc ggaaggaacg gtcaaatcga ttggtctacg ttcgacacgc
    11881 attttatcgt ttacaggtga gctttcgatt attccaaacg ggacgatgag cgaggtgacc
    11941 aacttctcag taacgaatgg tgtctccatt attgatattc cagtgtcaat tcatgagaaa
    12001 attgacgatg tagagaagaa aatgaatctc ttcttaaaaa cgattcctaa aaagtatgat
    12061 atttttatcg aaccccctga agtattaggt gtcgataaat tcaacagcta tgaagtgatg
    12121 attcgtgtgg cgggtgaaac gttgccgggt gaaagctttg gaggctcacg tattttacgc
    12181 cgcgagttaa aagaatttct acaatctgaa ggtattgaag caccaatgcc gacacttgtc
    12241 cagttatatc aagaacaaca aaacaaggaa gcatagaggt gaaattgagt ggcttcaaat
    12301 tatgaattaa atgatatagt agagatgaag aagcaacacg catgtggaac aaatcgcttt
    12361 aaaatcattc gtatgggtgc ggacatccgt atcaaatgtg aaaattgtca gcgcagtatt
    12421 atgttaccac gtcaaacttt caacaaaaaa ataaaaaaag tactcgaaaa agcgagttca
    12481 aatgagaagg agaatgaaac atggctttaa cagctggtat tgtcggctta cctaacgtcg
    12541 gaaaatcaac tttatttaac gcaattacaa aagcaggtgc acttgctgcc aactatcctt
    12601 tcgcaacgat tgatccaaac gtcggcatcg ttgaggtacc tgatacacgt ttaacacaat
    12661 tagaagcaat cgtaaatccg aaaagaacgg tacccacaac gtttgaattt acagatattg
    12721 ccggtatcgt gaaaggcgct tcaaaaggag aggggcttgg aaacaaattt ttatcacata
    12781 ttcgcgaagt tgacgccatt tgccaagttg tgcgtgcatt cgatgatgaa aatgtgacac
    12841 acgttgcagg acgcgtgaac ccgattgaag atattgaagt gattaacatg gagttagtat
    12901 tagcggattt agaatctgtt gaaaaacgtt tgccacgtct agagaaaatg gcgaaacaaa
    12961 aagacaaaac agccgtgaat gaagtgcgta ttttaacaag aattaaagaa acacttgaaa
    13021 atgggcaacc tgtccgtagt ttagaattta atgatgaaga tcaaaagtat gtgaatcaag
    13081 cgcaattgtt aacatcaaaa tcgatgttat atatcgcaaa cgttggtgaa gatgaaatta
    13141 atgacgtaga aaatgataaa gtgaaagcga ttcgtgagta tgcggcacaa gaagattcag
    13201 aagtgatcgt catcagtgcc aaaatcgagg aagagattgc gacattagac gaggaagata
    13261 aagcgatgtt cttggaagaa ttagggattg aagagcctgg tttgaatcgt ttaattcgta
    13321 aaacatatga tttattagga ttggcgacgt attttacagc aggtgtgcaa gaagtgcgtg
    13381 catggacgtt taaggaaggg atgacggcgc cacaatgtgc gggtatcatt catacagact
    13441 ttgaacgtgg tttcattcgt gctgaagtga cgagctacga agactttgtt gcacataatg
    13501 gtgaacaagg tgcaaaagaa gcggggaaaa tgcgcttaga gggtaaagac tatatcatgc
    13561 aagatggcga tgtcgtgcat ttccgtttta atgtgtagga gataaaaccg gtatatcaac
    13621 gtttttgagc atttgaaaaa agggtaatga taacaatcaa tttttgtgta attcaaaaat
    13681 ttaagcaaaa tgttgaattt gtaaggataa cattgcttgt cgttcttgct gtgtgattgc
    13741 gtaaacaaca aaatgatgta atatgtcatc gtatatcact tctttcacta cttttattaa
    13801 aggtgaaagg agtgtatttt ttatgaagaa aaagaggaat aaagcttatc aaaagttaga
    13861 taatttgagt attgagttta tcaaaaaaga agtaatggat tataaaaagt ctcaaaatct
    13921 ggcacccaaa actttagaaa tatacaaaag gctttttact gagttttatg agtttttcgg
    13981 caaagatatt gatattttaa tgattaatca aagacaagca agtgcattta tcaactactt
    14041 actcaatgac aaagtttatt atttagacag gtttaacaat agcggtgaaa tgcgtggaat
    14101 acagccgaca actgtcaaca catatttaaa agcgtgcaaa tctgtttatc agacccttat
    14161 tgaccttgaa tatattgaag ttaatccgtt tcaaaagcta aagacggtta aaaggcaaaa
    14221 tgaggaaggg gacggtgcga atttccatct tactaatgac aatcttgtgt ttg
//
LOCUS       DANHPA010000066        14229 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.066, whole genome shotgun sequence.
ACCESSION   DANHPA010000066 DANHPA010000000
VERSION     DANHPA010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 14229)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14229)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14229
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.066"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            72..1412
                     /locus_tag="PTC28_001587"
     CDS             72..1412
                     /locus_tag="PTC28_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002494266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine decarboxylase"
                     /protein_id="HDK5716870.1"
                     /translation="MQQPLRAKMLEWRKSQPISMHVPGHKNGTIGDLSMTQVPYDMTE
                     ITGFDNLHHAEEILYESMMQFNKYPGYRGYFLVNGTTSGILAVIHALASIPGDVAIAR
                     NVHKSVFHALELGQQSAQILATSVSEKTGQYCQPDVGRTDLERTKLGVVTYPNYYGET
                     FDVAHVVEQFHQFNIPVLVDEAHGAHFDLPGFPESSMRAGADYVVQSYHKTLPSLTMS
                     SVLWIHQDAPYREWIEYGLQVFQSSSPSYLLMESLEAAQAFYASYDSTLFFEKRKQLI
                     ATLENKGLTVITPQDPLKLLIRYKGMTGSSLQAQMEAQAIDVELSDENAVLWVLPLWH
                     HQDRFPFEELLERIDRMTLRPEAQSVHDKPPHLFTQPSTYRAIGMHPSRSIPYQKAEG
                     CILSRHLTPYPPGIPSLLKGEIVTTDMIKLIEYWQSRGFCVEGLMDDKITVKDE"
     gene            1415..2032
                     /locus_tag="PTC28_001588"
     CDS             1415..2032
                     /locus_tag="PTC28_001588"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HDK5716871.1"
                     /translation="MSLFITIEGPEGSGKTTVVQAVSEQLAQHYDVMTTREPGGVQTA
                     EAIRQILLDGETMDARTEALLFAASRREHLVAKVLPALSQGRLVICDRFIDSSLAYQG
                     YARKIGVKEVQAINDFAIEGRYPDLTIYLDIPAEVGRTRIESNRRAQNRLDKESVAFH
                     ERVVEGYQQLIAQDPKRFAVINANQSIEQVVTAALQVILQKIDAQ"
     gene            2102..2431
                     /locus_tag="PTC28_001589"
     CDS             2102..2431
                     /locus_tag="PTC28_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019467733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-di-AMP receptor"
                     /protein_id="HDK5716872.1"
                     /translation="MKMIIAIVQDQDSQELADKLVENNFRATKLATTGGFLRAGNTTF
                     LSGVEDERVEEILELIGGSCGNREQLVSPITPMGGSADSYIPYPVEVEVGGATVFVMP
                     VESFHQF"
     gene            2675..3607
                     /locus_tag="PTC28_001590"
     CDS             2675..3607
                     /locus_tag="PTC28_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HDK5716873.1"
                     /translation="MEVIEQLTKAYHNQKLSHAYLFEGDDAEAMKTTAIAFAQLILCQ
                     DEERCRLKVEGQNHPDFQYVMTDETTLKKEQVENLVHHMNQLPIEGDYKVYIIQDFEK
                     LTVQGENSILKFLEEPPKNTIAMIMTTKPEQILDTIHSRCQHVYFKPMSRATFVSRLT
                     EQDDTLTVPIAELLSTYTTQLEVALQLHESVELAPMRKMLLQWCDKLLNQREMALIGV
                     VELMKYAKTRQLQLLALSGMNAFFQDLMYVKVGMVERITFSELQSEYETLVTRLSYHH
                     LTYIIEQITEAHKKLNQNVNATLVFEQIAIKVKG"
     gene            3613..4416
                     /locus_tag="PTC28_001591"
     CDS             3613..4416
                     /locus_tag="PTC28_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage 0 sporulation family protein"
                     /protein_id="HDK5716874.1"
                     /translation="MYAVVGIYFEKANTLEYYAPNTTSLTIGQYVVVESKRGHELGVV
                     RHAPREVSEQDVTLPLKPVLRIATEADLIQYEKNEVDAARAADMCKGFVEQLGLEMCV
                     VNCEYILDRSKIIFNFTADERIDFRKLVRMLAQRLKTRIELRQIGVRDEAKLLGGIGP
                     CGRSLCCATFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKFENDFYESAREQ
                     LPDIGTRIQTPEGHGEVVSLNIIDVSMQVRLDGMEQLMEYHIEELETLK"
     gene            4429..4794
                     /gene="yabA"
                     /locus_tag="PTC28_001592"
     CDS             4429..4794
                     /gene="yabA"
                     /locus_tag="PTC28_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication initiation control protein YabA"
                     /protein_id="HDK5716875.1"
                     /translation="MDRNELFARLMQLEQHVARLNESMQELKALTVELVEENVALQLE
                     NDNFKTLMQQERDNVESMQVQEAEVAPQKPVKKQRQSREYFAKLYHEGFHICHDVFGK
                     HRHGEDCMFCLNVLNEKQE"
     gene            4805..5530
                     /locus_tag="PTC28_001593"
     CDS             4805..5530
                     /locus_tag="PTC28_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA1(Val) (adenine(37)-N6)-methyltransferase"
                     /protein_id="HDK5716876.1"
                     /translation="MLQPGERLDYLIREDLRIIQNDAVFSFSTDALLLGHFTEVRKRD
                     RILDMCAGNGVIPLLLSDKGNNVITGVEIQPQLVNMAVRSVQYNHLEDRITMVEMDIN
                     ALIQAYSPAQFDLITCNPPYFKANQTNQHQLEAHKIARHEIYCTLDDCLRVSNHLLKE
                     GGRVVMVHRAERMLDLFESMRHYRIEPKRLHMIFSKPGKAAQTIVVEGRKGGRQGLDI
                     APPFYIYDEQGDYTPEMKEIYYG"
     gene            5523..5771
                     /locus_tag="PTC28_001594"
     CDS             5523..5771
                     /locus_tag="PTC28_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011276773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HDK5716877.1"
                     /translation="MAKHYTYIVQCNDATFYTGYTNDLEARIVKHNEGKGAKYTKMRR
                     PVTLCYHEIFETKSEALKREHAIKKLTRQQKIHLIEER"
     gene            5773..6606
                     /gene="rsmI"
                     /locus_tag="PTC28_001595"
     CDS             5773..6606
                     /gene="rsmI"
                     /locus_tag="PTC28_001595"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HDK5716878.1"
                     /translation="MGELYLVGTPIGNLEDMTFRAIYTLQHVDLIACEDTRVTKKLCH
                     HFEITTPLKSYHDHNKEQETETLIDMLVAGKTIALVSDAGLPLISDPGYELVVRAREQ
                     GVTVVPIPGPNAGLTALMASGLPSFTYTFLGFLPRKSRDKTALLETRMYQDSTLLLYE
                     SPHRVKDTLEVIAQIDAERTVTLGRELTKKFEQITTAPVTSLLEQLETDIPLRGEFVV
                     IIEGATPIEGTAWFETLSVEDHVTHYIDEGMKPKAAIKKVAQEREMSSKTVYNIFHDI
                     H"
     gene            6697..8670
                     /gene="metG"
                     /locus_tag="PTC28_001596"
     CDS             6697..8670
                     /gene="metG"
                     /locus_tag="PTC28_001596"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HDK5716879.1"
                     /translation="MVKDTFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRLQGFDV
                     RYLTGTDEHGQKIQEKAQNAGMSELDYLDGMIKDIKALWEKLDISNDDFIRTTERRHT
                     EVVEKIFEKLLSKGDIYLGEYEGWYSVPDETFYTETQLVDPVYEDGKIVGGKSPDSGH
                     EVELVKEESYFFKLSNYTDRLLAFYDAHPEFIQPPSRKNEMINNFIKPGLEDLAVSRT
                     SFNWGVKVPSNPKHVVYVWLDALVNYVSALGYLTDDDHLFRQYWPADIHLMAKEIVRF
                     HSIIWPIILMALDLPLPKKVFAHGWVLMKDGKMSKSKGNVMDPNVLIDRYGLDATRYY
                     LMRELPFGSDGVFTPEAFVDRTNFDLANDLGNLVNRTISMINKYFDGELPAYQGPTHE
                     LDEEMEQMALDTVQAYHESMDKLQFSVALSTVWKLISRTNKYIDETTPWILAKDESQK
                     VALGNVMAHLVENIRFAAVLLRPFLTHAPYQIFEQLHIHNEALHGFEGLATYGQLTEP
                     IMVTEKPQPIFPRLDVEAEVSYIKASMQPPKEESVEEEVPAKAQIDIKDFDKVEIKAA
                     TIIDAEKVKKSNKLLKIQVDLGYEKRQIISGIAQFYAPEDIIGKKVAVVTNLKPAKLM
                     GQKSEGMILSAEKDDVLTLISLPNAVQNGAVIK"
     gene            9114..9881
                     /locus_tag="PTC28_001597"
     CDS             9114..9881
                     /locus_tag="PTC28_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HDK5716880.1"
                     /translation="MLIDTHVHLNADQYDKDLEDVIQRALDAGVDRMFVVGFDTKTIE
                     RAMQLIEDYDFIYAIIGWHPVDAIDFTDERLAWIEKLAEHPKVIGIGEMGLDYHWDKS
                     PKDIQKEVFRKQIALAKRVKLPIVIHNREATQDCIDILMEEHAEEVGGIMHSFSGSPE
                     IADVVINKLNFHISLGGPVTFKNAKQPKEVAKHVPLERLLVETDAPYLTPHPYRGKRN
                     EPARVTLVAEEIAQLRGISYEEVARQTTENAEKLFGL"
     gene            9921..10460
                     /gene="rnmV"
                     /locus_tag="PTC28_001598"
     CDS             9921..10460
                     /gene="rnmV"
                     /locus_tag="PTC28_001598"
                     /EC_number="3.1.26.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001832196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease M5"
                     /protein_id="HDK5716881.1"
                     /translation="MKVNEFIVVEGRDDTERVQRAVTCDTIETNGSAIDQGILDVIRQ
                     AQETRGVIVLTDPDFPGDKIRTTIREAVPGVKHAFIDRERAKNKRGKIGVEHASLEDI
                     REALMHVSTPLSEAHETISKDVLIDLGLIIGPAARHRRNLLGKRLHIGHSNGKQLLKK
                     LNAFGYTEADVRRALEEEE"
     gene            10465..11355
                     /gene="rsmA"
                     /locus_tag="PTC28_001599"
     CDS             10465..11355
                     /gene="rsmA"
                     /locus_tag="PTC28_001599"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HDK5716882.1"
                     /translation="MHDKDIATPSRTRALLNQYGFNFKKSLGQNFLIDVNIINRIIDA
                     SGIDHMTGVIEIGPGMGSLTEQLAKNAQHVLAFEIDQRLIPVLDDTLSPYNNVTVINE
                     DILKANVAEAIQQHLSHCEKIMVVANLPYYITTPILLTLLEQDLNIDGYVVMMQKEVG
                     ERLNAQVGTKAYGSLSIVAQYYTETSRVLTVPKTVFMPPPNVDSIVVKLMKRESPIVD
                     VDNPNAFFKMTKGAFSQRRKTIYNNYQNLFENGKEQKETIMQWLERADIDPKRRGETL
                     SIQEYARLYAELENFPNLSL"
     gene            11455..11721
                     /locus_tag="PTC28_001600"
     CDS             11455..11721
                     /locus_tag="PTC28_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002473059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Veg family protein"
                     /protein_id="HDK5716883.1"
                     /translation="MPKSIGDIKNSLDCQLGNRIVLKANGGRKKTIERCGVLTETYPS
                     VFVVELDPEKHNFERVSYTYADVLTENVKVSFVEDELQQEVIAH"
     gene            12112..12960
                     /locus_tag="PTC28_001601"
     CDS             12112..12960
                     /locus_tag="PTC28_001601"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011276766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HDK5716884.1"
                     /translation="MIYETAPAKINLTLDTLYKRDDGYHEVEMIMTTIDLSDRLSFEK
                     RNDSRIVLKVDETFIPSDDRNLAYRAALLMKETYQIKQGVTITLEKNIPVAAGLAGGS
                     SDAAATMRGMNRLFELNRSLDELSELSAAIGSDVPFCVYGTTALCKGRGEILEILPKT
                     PSAWVIVAKPQAGLSTPEIYGGLDLSQPFPVHTEQCLKAIEENDYDALCKSLSNRLEP
                     VSMQLQPEIAKIKTNMLNNGADGALMSGSGPTVYGFAQRERQARHIFNAVSGCCNDVY
                     LVRTLG"
     gene            12982..13803
                     /gene="purR"
                     /locus_tag="PTC28_001602"
     CDS             12982..13803
                     /gene="purR"
                     /locus_tag="PTC28_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011276765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pur operon repressor"
                     /protein_id="HDK5716885.1"
                     /translation="MRYKRSERIVYMTQYLINNPNKLVPLTYFVTKFEQAKSSISEDV
                     QIIKETLVKEGLGTVETISGASGGVKYRPQMQKDEAQAVIEEVIALLQEKERLLPGGY
                     LFLSDLMGNPALLKRVGRLIATIYMQEELDAIVTIATKGISLANAVASVLNLPVVVIR
                     KDNKVTEGSTVSINYVSGSTRKIETMVLSKRTLKEHSNVLVVDDFMRAGGSINGVMNL
                     MNEFKAHVKGVSVLVESKEVKQRLIEDYTSLVRLSDVDEYNQEFKVESGNSLSKF"
     gene            13828..14208
                     /locus_tag="PTC28_001603"
     CDS             13828..14208
                     /locus_tag="PTC28_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDK5716886.1"
                     /translation="MKIINTNNAPKAVGPYSHASIVNGLVYTSGQIPLNLEGEIVSDD
                     VEKQTEQVLENLKAVLDAAGSDLNHVVKVLIFLSDMENFQKVNEVYTKYFDTHRPARS
                     AVEVARLPKDVKIEIEMVAEVKEI"
BASE COUNT         4571 a         2367 c         3265 g         4026 t
ORIGIN      
        1 gatatagtga atatgttaaa atcatgatgt tacgaaaagg tttaattgca taaaagaaag
       61 gggggctatg gatgcagcaa ccattaagag cgaaaatgtt ggaatggcga aaaagtcaac
      121 cgatttcgat gcatgtccca ggtcataaaa atgggacaat cggtgatctt tcaatgacac
      181 aggttccata tgatatgaca gagattacag gtttcgataa tcttcatcat gctgaagaga
      241 tcttgtatga aagtatgatg caattcaata aatatccggg ttatcggggt tactttttag
      301 tgaatgggac gacaagtggt atactcgcag tcattcatgc gcttgcgtcg attccggggg
      361 atgttgctat tgcacgaaat gttcataaat cagtatttca cgcattagaa ttaggacaac
      421 aaagcgcgca aattttggcg acgtccgtga gtgagaaaac aggacaatat tgccaacctg
      481 acgttgggcg cactgattta gaacgtacga aattaggtgt cgtgacttat ccgaattatt
      541 atggtgaaac gtttgatgtg gcacatgtcg ttgaacaatt tcatcaattc aatattcctg
      601 ttctcgttga cgaggcgcat ggtgctcatt ttgatttgcc tggctttcca gagtcaagta
      661 tgcgagcggg ggcggactat gttgtgcaat cttatcataa aacattgccg agtttgacga
      721 tgagctcggt gttatggata catcaagatg ccccttatcg tgaatggatt gagtatggtt
      781 tacaagtatt tcaatcttct agcccgtctt acttgcttat ggaaagtcta gaagctgctc
      841 aagcatttta tgcatcgtat gacagtacgt tattttttga aaaaagaaag caactcattg
      901 caacacttga aaataaaggt ttaacagtga ttacaccgca agatccgttg aaattattaa
      961 ttcgatataa aggtatgacg ggctcatcgt tacaagctca aatggaagca caagcgattg
     1021 atgtcgaact gtcggatgaa aatgcggtgt tatgggtttt accgttatgg catcatcaag
     1081 atcgatttcc ttttgaagaa ctgctcgaaa ggattgaccg gatgacttta aggccagaag
     1141 cacaatcagt tcatgacaag ccaccacatt tatttacaca accgagtaca tatcgagcaa
     1201 ttggcatgca tccgtcgcgg tctatccctt atcaaaaagc tgaagggtgt atattatccc
     1261 gacatttaac accgtatcca cccggtattc cgtcactgtt aaaaggagaa atagtgacca
     1321 cagatatgat aaaattaata gaatattggc agtctagagg cttttgtgtg gaaggtctta
     1381 tggatgataa aattacagtg aaggatgagt gaagatgtct ctgtttatca caattgaagg
     1441 tccagaaggt tctggcaaaa cgactgttgt tcaagcagtt tcagaacaat tagcgcaaca
     1501 ctatgacgtg atgacgacac gtgagccggg gggcgtacaa acagcagaag cgattcgtca
     1561 aattttatta gatggagaaa cgatggatgc gcgaacagag gccttattgt ttgcggcttc
     1621 gagaagggag catcttgttg caaaagtcct cccagcgtta tcgcaaggac gacttgtcat
     1681 ttgtgaccgc tttattgaca gttctttagc ataccaaggt tatgctcgaa aaattggggt
     1741 aaaagaagta caagctatta atgattttgc gattgaagga cgatatcccg atttaacgat
     1801 ttatttggat attccagctg aagttggtcg aacgcgtatt gaaagtaatc gccgcgcaca
     1861 aaatcgttta gataaggaaa gcgtggcatt tcatgaacgt gtggttgaag gatatcagca
     1921 actcatcgca caagatccca agcgttttgc ggtcattaat gcgaatcaat cgattgaaca
     1981 agttgtaact gcggcattac aagtgatttt acaaaaaata gatgcgcagt aatgtgattt
     2041 gaaaccatgt gaagccatgt actcagatat gttatactaa acttcaagag gtgttagaaa
     2101 aatgaaaatg attatagcaa ttgttcaaga ccaagatagt caagaacttg cagacaaact
     2161 cgttgaaaac aattttcgtg cgacaaaatt ggcaacaacg ggtggcttct tgcgcgcggg
     2221 taatacaaca tttttaagcg gtgtggaaga tgagcgtgtg gaggaaatac ttgaactcat
     2281 tggcggctca tgtggcaata gagaacaact tgtatcgcct attacgccaa tgggaggtag
     2341 cgcagattct tatatcccat atcctgttga agtagaagtc ggcggtgcaa cagtctttgt
     2401 catgccagtt gaatcgttcc atcaatttta aaatagtaag gaaggttgtg acagtatgac
     2461 gccaacaagt catatatagt cgcaaccttt tttattgaat agatgcgtat gtagttatct
     2521 caacaaaagt ctgatgaatc tcttaataaa tatcaataca atgaagatgt tgacgaatga
     2581 aataaagtca tagtctatcc acacatattg cggtaaaatg gagtagtatc tcatacatat
     2641 ccatcaatat ctttacaaaa ggagcgcaag gttaatggaa gtaatcgaac aactcaccaa
     2701 agcctatcac aatcaaaaac tgtcacatgc gtatttattc gaaggtgatg acgccgaagc
     2761 aatgaagacg accgcgatag cctttgcgca actcatttta tgtcaagatg aagaacgatg
     2821 tcgcttgaaa gttgaagggc agaaccatcc tgactttcaa tatgtgatga cagatgagac
     2881 gacactcaaa aaggaacaag tcgaaaactt agtacatcac atgaaccaat tgcctattga
     2941 aggagactat aaagtttaca ttatccaaga ctttgaaaaa ttaacggttc aaggtgaaaa
     3001 tagtattctt aagtttttag aagaaccgcc gaaaaatacc attgcgatga ttatgacaac
     3061 caaacccgaa caaattttag atacgattca ttctcgttgt cagcatgtgt attttaaacc
     3121 aatgtcacgt gctacatttg tgtcgcgatt aacggaacaa gatgacacgt taactgtacc
     3181 aattgcagag ttgttaagta cgtatacgac acaacttgag gtggcgctac aacttcatga
     3241 aagtgttgaa ttagctccga tgcgtaagat gcttttacaa tggtgtgata agttgttaaa
     3301 ccaacgcgaa atggcattaa ttggtgttgt ggaattaatg aaatatgcaa aaacgagaca
     3361 gttacaattg ttggcgttat ctggcatgaa tgcgtttttc caagatttaa tgtacgtcaa
     3421 agtgggcatg gtggagcgga ttacattttc agagttgcag tcagaatatg agacgttggt
     3481 gacacggttg agttatcacc atttaaccta tattatagag caaataacag aagcacataa
     3541 aaagctcaat caaaacgtga acgccacgct agtatttgag caaattgcaa ttaaagtgaa
     3601 agggtgacgc tgatgtatgc tgttgtaggg atttactttg aaaaggccaa tacattagaa
     3661 tattatgcgc caaatactac ttcactcacc atagggcagt atgtcgtagt ggaatctaag
     3721 cgtggccacg aattaggtgt tgtgagacat gcgccgagag aggtatcaga gcaagacgtc
     3781 acactgccat taaagcctgt tttacgtatc gcaacggaag cggatttaat ccaatatgaa
     3841 aaaaacgaag tggatgcagc gcgtgcggcg gatatgtgta aaggatttgt cgaacaatta
     3901 ggtttggaga tgtgcgtcgt gaattgcgaa tacattttag accgttctaa aatcattttt
     3961 aattttacag cggatgaacg tatcgatttc cgaaaattag tgcgtatgct ggcgcagcgc
     4021 ttaaaaacac gtatcgaatt gcgtcaaatc ggcgtgcgtg atgaagcgaa attactcggt
     4081 gggattggtc cgtgtgggcg ttcgctatgt tgcgcgacgt ttttaggaga tttcgaaccg
     4141 gtctcaatca aaatggcaaa agaccaaaat ttatcgttaa atccgactaa aatttcgggt
     4201 gcatgtggcc gtttaatgtg ttgtttgaaa tttgaaaatg atttttatga atcagcacgt
     4261 gaacagttac cagatatcgg gacacgtatt caaacaccag aaggtcatgg tgaagtcgtc
     4321 agtctgaata ttattgatgt atcaatgcaa gtgcgattag atggcatgga acaattgatg
     4381 gaataccata ttgaagagtt agaaacatta aaataggagg tacatctgtt ggatcgaaac
     4441 gaattattcg ctcgcttaat gcagttagaa caacacgttg cgcgtttgaa tgaaagcatg
     4501 caggagttaa aagcactgac tgtagagcta gtggaagaaa atgtagcatt acaactagaa
     4561 aatgataact ttaaaacatt gatgcaacaa gaacgagata atgtggaatc aatgcaagtt
     4621 caagaagcag aagtagcgcc tcaaaaaccc gtgaaaaagc agcgtcaaag tcgtgaatat
     4681 tttgcgaaac tgtatcatga aggtttccat atttgtcatg atgtattcgg taaacatcgt
     4741 catggcgagg actgtatgtt ttgtctcaat gtgctaaatg agaagcaaga atagaggtgc
     4801 tgtgatgtta caacctggtg aaagactgga ttatttaata cgagaagact tacgcattat
     4861 tcaaaatgat gcggtctttt ctttttctac agatgcactg ctattaggtc attttacaga
     4921 agtgaggaaa cgagatcgca ttttagatat gtgtgcaggt aatggcgtga ttccattatt
     4981 gttgtcggac aaaggaaata atgtgattac aggtgtggaa attcagccac agcttgttaa
     5041 tatggcagtt cgcagtgttc aatacaatca cttagaagac cgtattacaa tggttgaaat
     5101 ggatattaat gcgctcattc aagcgtattc cccagcgcag tttgatttaa tcacttgcaa
     5161 tcccccttat tttaaagcaa atcaaacgaa tcaacatcaa cttgaagccc acaaaattgc
     5221 gcgtcatgaa atttattgta cgttggatga ttgtttgcgt gttagcaacc atttgttaaa
     5281 agaagggggg cgggttgtga tggtgcatcg agcagaacga atgctggatt tgtttgaatc
     5341 tatgcgtcat tatcgtattg aaccgaaacg tttgcatatg atttttagta agcctggaaa
     5401 agctgcacag acgattgtcg ttgaaggccg taaaggggga cgtcaaggtc tcgatattgc
     5461 accccctttt tatatttatg atgaacaagg ggattatacg ccagaaatga aggagattta
     5521 ttatggctaa acattatacg tatatcgtac aatgtaatga tgcaacattt tatacggggt
     5581 atacaaatga tttggaagcg cgcatcgtca aacataatga aggtaaaggt gcgaagtata
     5641 caaaaatgag acgaccggtc acattgtgtt atcatgaaat tttcgagacg aaatcagaag
     5701 cattaaagcg agaacatgcg attaaaaaat tgacgcgaca acaaaaaata catttaattg
     5761 aggagcgata acatgggaga gctctattta gtcggtacgc ccatcggaaa tttagaagac
     5821 atgacattcc gagcgattta tacgttacaa catgtggatc tcattgcatg tgaagataca
     5881 cgtgtgacga aaaaattgtg tcatcatttt gagattacaa cccctttaaa gtcttatcat
     5941 gaccataata aagaacagga aactgaaact ttgatcgaca tgttagtagc aggaaaaact
     6001 atcgctttgg tctctgatgc gggcttacca ttgatttcgg atccggggta tgaattggta
     6061 gttcgtgcac gtgaacaagg tgttacagtc gtgccaattc ctgggccgaa tgcaggcttg
     6121 acggcattga tggcgagtgg tttaccttca tttacatata cgtttttagg atttttacct
     6181 cgcaaatcgc gtgataaaac ggcgttacta gagacgagaa tgtatcaaga cagtacattg
     6241 ttattgtatg aatcaccgca ccgtgtgaaa gatacactcg aagtgattgc tcaaatcgat
     6301 gctgaacgga cagtgacact tggacgagag ttgacgaaga agtttgagca aattacgacc
     6361 gcacctgtca catcattgct cgaacaatta gaaacagaca ttccattacg tggagaattt
     6421 gttgttatta tcgaaggtgc cacaccaatt gaagggacgg catggtttga aacgctgtcc
     6481 gttgaagacc acgtgacaca ttacattgat gaaggtatga aaccgaaagc ggcgattaaa
     6541 aaagtcgcac aagaacgcga aatgtcgagc aagaccgtct acaacatttt tcatgatatt
     6601 cattagtgat acaccgtaag acaaataggt tgtaacattg aaaaacaact aaattttaga
     6661 tatattagat aagataagaa ttgaggagga gcgctgatgg tgaaagatac tttttatatt
     6721 acaacaccga tttactatcc gagtgggaat ttacacattg gacacgcgta ttcaacagta
     6781 gcaggcgatg tcattgcgcg ttataaacgt ttgcaaggct ttgatgtacg ctatttaact
     6841 gggactgatg agcacggtca aaaaattcaa gaaaaagctc aaaatgcagg aatgtcagag
     6901 ctagattatt tagacggtat gattaaagat attaaagcat tatgggaaaa gttagatatt
     6961 tctaatgatg actttattcg tactacagag cgtcgtcata cagaagtcgt tgaaaaaatc
     7021 tttgaaaaat tattatcaaa aggcgacatc tatttaggtg aatatgaagg ttggtattca
     7081 gtaccggatg aaacattcta cactgaaacg cagctagtag accccgtgta tgaagacggt
     7141 aaaattgtgg gtggtaaaag tccagactca ggtcatgaag tggaattggt gaaagaggag
     7201 agttacttct tcaaattatc caactatact gaccgtttat tagcttttta tgatgcgcac
     7261 ccagagttca ttcagccccc ttcacgtaaa aatgaaatga tcaataattt tattaaacct
     7321 ggcttagaag acttagctgt atcacgaacg tcttttaact ggggtgtcaa agtgccttct
     7381 aacccgaaac acgtcgttta tgtatggtta gatgcgcttg tgaactacgt ttcagcgctc
     7441 ggttacttaa cggatgacga ccatttattc cgtcaatatt ggccggcaga cattcattta
     7501 atggcgaaag agattgtgcg tttccattct attatatggc cgattatttt aatggcatta
     7561 gatttaccat tacctaaaaa agtgtttgca cacggttggg tattgatgaa agatggtaaa
     7621 atgagtaagt ctaaagggaa tgtgatggat ccgaatgtat tgattgatcg ttatggttta
     7681 gatgcgacac gttactattt aatgcgtgaa ttaccattcg gttcggacgg tgtatttaca
     7741 cctgaagctt tcgtggatcg tacgaatttt gatttagcga atgatttagg taacttagtc
     7801 aatcgtacaa tttcgatgat taataagtat tttgatggcg agcttcctgc atatcaaggt
     7861 ccaacgcatg aactggatga agaaatggaa caaatggcgt tggatacggt acaagcttat
     7921 catgaaagta tggataagtt gcagttttct gtcgcattat caacagtttg gaagttgatc
     7981 agtcgtacga ataaatatat tgacgaaaca acaccttgga ttttagcaaa agatgaatct
     8041 caaaaagtag cgttaggcaa tgtgatggcg catctcgttg aaaacattcg ctttgcggca
     8101 gtgttattac gtccgttctt aacacatgcc ccttatcaaa tatttgaaca actgcatatt
     8161 cataacgaag cattacacgg ctttgaaggt ttggcaactt acggtcaatt gacagaaccg
     8221 attatggtga cagaaaagcc acaaccgatt ttcccacgtc tcgatgtgga agcggaagtg
     8281 agctatatta aggcatcaat gcaaccgcca aaagaagaaa gcgttgaaga agaagtgcct
     8341 gccaaagcac aaattgatat taaagatttt gataaagtgg aaataaaggc agcgacaatt
     8401 attgatgctg agaaagttaa aaagtctaat aagttattga aaatacaagt agatcttggt
     8461 tatgaaaaac gtcaaatcat ttcaggcatt gcgcaatttt atgcaccaga ggatattatt
     8521 ggtaaaaaag ttgcagttgt gacgaatttg aagcctgcga aattgatggg gcaaaaatct
     8581 gaagggatga ttttgtctgc ggagaaagat gatgtgttga cgttgattag tttaccgaat
     8641 gcggtgcaga atggtgctgt gattaagtag gtgtttgagg agagtgagac ggtgatgttg
     8701 atgtgtctca ctcttttatt tcatgctgaa cattttgggg tagtgacgga ttgcggattg
     8761 ctgaaacgcg ctacgctttc caaggcgctg aagtctcaac taaatttggc ttgatggaag
     8821 tgggcattta gtggaagcca aattggattt tcgacttcag cagatgcctt aggagtcttg
     8881 cacgattctt gcaatctggg tgagtgccgc aagctggtaa taagtaatag tactttactt
     8941 gaaacaaatt ttacatgaca agattagcca catcacagca ctcttcagtt tttgaggtga
     9001 gagcgtagat gtgccaggcg ttttgttgat gtgtggtatg gtatgaatcg tggtaatagt
     9061 gaagcaatac gtcaatggaa gtgtgcgatt ttgatagatg gaggaggata tttatgttaa
     9121 tagacactca tgtgcatttg aatgcagatc aatacgacaa agacctagaa gatgtgattc
     9181 aacgtgcgct tgatgctggc gtggatcgca tgtttgtggt gggttttgat acgaagacga
     9241 ttgagcgcgc gatgcaattg atagaggatt atgattttat ttatgccatt attggttggc
     9301 acccggttga tgcgattgac tttacagatg aacgtttagc gtggattgaa aagttagcgg
     9361 aacatcctaa agtgattggt attggtgaga tgggtttaga ttatcattgg gacaaatcac
     9421 cgaaagatat tcaaaaagaa gtattccgta aacaaattgc gttagcgaaa cgtgtgaagt
     9481 tgccaatcgt catccacaat cgagaagcga cacaagattg tattgacatc ttgatggaag
     9541 aacatgctga agaagtgggt ggcattatgc acagttttag cggttctcca gaaattgccg
     9601 atgtggtcat taataagtta aactttcaca tttctttagg tgggccagta acatttaaaa
     9661 atgcgaaaca accgaaagaa gtggcaaaac atgtaccatt ggagcgtctc cttgtcgaaa
     9721 cggatgcgcc ttatttaaca ccgcacccat accgcggtaa acgtaatgaa cctgcacgtg
     9781 tcactttagt tgctgaagaa attgcgcagt tacgtggcat ttcatatgaa gaggtcgcac
     9841 gtcaaactac ggaaaatgca gaaaaattat ttgggttata atgaaacaaa catgatgaca
     9901 aatataaaga aggtgcaaag gtgaaagtca atgaatttat tgtagtagaa ggtcgggatg
     9961 atacggagcg tgttcaacgt gctgtcacat gtgatacgat tgaaacaaat ggaagtgcga
    10021 ttgaccaagg tattttagat gtcatacgtc aagcacaaga gacacgtggt gtgattgtat
    10081 taacggaccc tgatttcccg ggtgataaaa ttagaacgac gattcgtgaa gcagtgccgg
    10141 gtgtgaaaca tgcctttatt gaccgtgaac gtgctaaaaa taaacgtggg aaaattggtg
    10201 tcgaacatgc gagtttagaa gatattcgtg aagcattgat gcacgtgtca acgccgttat
    10261 ctgaagcaca tgaaacgatt agtaaagatg tgctcattga cctaggctta atcattggtc
    10321 ctgccgcaag acaccgtcga aaccttctag gcaaacgttt gcacattggt cattctaacg
    10381 ggaagcaatt attaaaaaag cttaatgcat tcggctatac ggaagcggat gtacgtcgag
    10441 cattagaaga agaggagtaa agatatgcat gataaagata ttgccacgcc atcaagaaca
    10501 cgtgcactat taaatcaata tggctttaac tttaaaaaaa gcttaggtca aaacttttta
    10561 atcgatgtga atattattaa tcgtattatt gatgcaagtg ggattgatca catgacaggt
    10621 gtcattgaaa ttggtcctgg gatggggtcg cttacagaac aacttgctaa aaatgcacaa
    10681 catgttttag cgttcgaaat cgatcaacgg cttattcctg tgcttgacga tacactatcg
    10741 ccttataaca atgtgactgt aatcaacgaa gatattttaa aggcaaatgt tgctgaggcg
    10801 attcaacagc atttgtctca ctgtgagaaa attatggtgg ttgcgaattt gccttattat
    10861 attacgacac caattttatt aacattgctt gagcaagatt taaatattga tgggtatgtt
    10921 gtgatgatgc aaaaagaagt cggtgaacgt ttaaatgcgc aagtcggcac taaggcgtac
    10981 ggctctttat ccattgtggc acaatattat acggagactt caagggtgct cacagtgccg
    11041 aaaacggtct ttatgccacc tcctaatgtc gattctatcg ttgtgaaatt gatgaagcgc
    11101 gagtcgccca ttgtggatgt tgacaacccg aatgcatttt tcaaaatgac gaaaggcgca
    11161 tttagccaaa gacgtaaaac catttacaac aactatcaaa acttatttga aaatggtaaa
    11221 gaacaaaaag agaccattat gcaatggctt gaacgagcgg atattgatcc aaaacgtcgc
    11281 ggtgaaacgt tatcgataca agaatatgca cgtttgtatg cggaattgga aaatttcccg
    11341 aatttgtcct tataaattga ttgacaacag ctttccacct tgctaaaatt aaaattttat
    11401 ttgacgaaac acttctaggt gtgttataat acacttgtag cgaggtggag caatatgcca
    11461 aaatctattg gagacatcaa aaactctctt gattgtcaat taggaaatcg tattgtactt
    11521 aaagctaatg gaggtcgcaa aaaaacaatt gaacgttgcg gagtactcac tgagacttat
    11581 ccgtcagtgt tcgttgtaga attggaccca gagaaacata attttgaacg tgtatcttat
    11641 acttatgcag atgtgttgac tgaaaatgtc aaagtatcat ttgtagaaga tgagttacaa
    11701 caagaagtaa tcgcacacta aatatacaga gactatctac ataataacca ttctactgat
    11761 gtgagtagag tggtttttta ttatgcaggg atgtctttca acacacagtc ttattgggca
    11821 aagtgacaac atttcccgcc aaatcccttt tcacttatat cgatgaggac gaaaataact
    11881 tgcatcaaac tttttaattt gaagcattgt tgttaaacta aggcgatgaa aacttttgtg
    11941 atacgttatt cttgtacacg tgaaggtgcg ttgaacaccg gtgatacgat gatttgcttt
    12001 ttatagagcc ttatcacttg ttggggttgg gaattttaat ctgtatgagc gcactttgaa
    12061 acggttatgt gttaaaatca cagtaatacc atttggaaag aggaaattgg aatgatttat
    12121 gaaacagcgc ctgctaaaat caatttgaca ttagatactt tgtacaaaag agatgacggt
    12181 tatcatgaag ttgaaatgat tatgacaaca atcgatttga gcgatcggtt atcatttgag
    12241 aaaagaaatg attcacgtat cgttttaaag gttgatgaaa cgtttattcc ctctgatgat
    12301 cgtaatttag cttatcgagc agcacttttg atgaaagaaa cttaccaaat taagcaaggt
    12361 gtaacgatta cattagaaaa gaacattcct gtcgcagcag ggcttgcagg aggctcaagt
    12421 gatgcagcag caaccatgcg tggtatgaat cgtttgtttg aattaaatcg ctcacttgat
    12481 gaattgagcg agctttctgc ggcgattggt tcggatgtgc cattttgtgt gtacggcact
    12541 acggcacttt gtaaaggacg tggtgaaatt ctcgagattt taccgaaaac gccttcagct
    12601 tgggtcattg ttgctaaacc acaagccggc ttatcgacac cagagattta tggtggttta
    12661 gatttgagtc aacctttccc agttcataca gagcaatgtt taaaagctat tgaagagaat
    12721 gactatgatg cgctatgcaa aagtttgtct aaccgcttag agcctgtttc tatgcaactc
    12781 caaccggaaa ttgctaaaat taaaacaaat atgctcaata acggtgcgga cggtgcattg
    12841 atgagtggta gcggcccgac agtatatggt tttgcacaac gcgaacgcca agcccgccat
    12901 atttttaatg cagtgagcgg ttgttgtaat gatgtctatc tcgtaaggac actggggtaa
    12961 aaaagagaaa gggtgacagc aatgcgatac aaaagaagcg aacgtattgt ttatatgact
    13021 cagtacttaa tcaataatcc gaataagctt gtaccactga catattttgt aaccaaattt
    13081 gaacaagcga aatcatcaat tagtgaagac gttcaaatta ttaaggaaac attggttaaa
    13141 gaaggattag gtacagtgga aaccatatct ggcgcaagtg ggggtgtgaa atatcgccca
    13201 caaatgcaaa aggatgaggc gcaagcagtg attgaagaag tgatagcact cttgcaagaa
    13261 aaagagcgct tattaccagg agggtattta tttctttctg atcttatggg gaatcctgca
    13321 ttgttaaaac gtgtgggccg actcattgcg acgatttaca tgcaagaaga gttggatgcg
    13381 attgtgacga ttgctacaaa agggatttca ttggcgaatg cagttgcgag tgtgctcaat
    13441 ttaccagttg ttgtcattcg taaagacaat aaggttacag aaggttcaac agtttcaatc
    13501 aattatgttt caggatcgac aaggaaaatc gaaacaatgg tattatctaa acgtacgtta
    13561 aaggaacact caaacgtgtt agttgtggat gactttatgc gtgctggtgg ttcaattaat
    13621 ggggttatga atttaatgaa tgagtttaaa gcccacgtaa aaggggtatc agtacttgta
    13681 gaatccaaag aagtcaaaca acgactgatt gaagattata cttccttagt acgtctctct
    13741 gatgtcgatg aatacaatca agaatttaaa gtagagtcag ggaacagtct atctaaattt
    13801 taaagggtaa aaggagcgtt caattatttg aaaatcatta atacgaacaa tgcacctaaa
    13861 gcagttggac cttactcaca tgcttcaatc gtcaacggac tcgtttacac ttctggtcaa
    13921 ataccattga atctggaggg ggaaattgta agcgatgatg tagaaaagca aactgagcaa
    13981 gtgttggaga atctaaaagc ggtattggat gctgcggggt cagatttgaa tcacgttgtt
    14041 aaagttttaa tcttcttatc ggatatggaa aactttcaaa aagtgaatga agtgtataca
    14101 aaatactttg acacacaccg tcctgcgaga agtgcagtgg aagtcgcacg tttaccgaaa
    14161 gatgtaaaaa tagagattga aatggttgct gaggttaaag agatataatc aaaaaagtta
    14221 agattatga
//
LOCUS       DANHPA010000067        13996 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.067, whole genome shotgun sequence.
ACCESSION   DANHPA010000067 DANHPA010000000
VERSION     DANHPA010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 13996)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13996)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13996
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.067"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            71..1576
                     /locus_tag="PTC28_001604"
     CDS             71..1576
                     /locus_tag="PTC28_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HDK5716887.1"
                     /translation="MSSHYTKEEILNSTPRTGFFGHPKGLSTLVFTEFWERFSYYGMK
                     GILAFYIYYSVAKGGFGLDQGVALQIVSIYGALVYMSGVIGGWIADRITGTRHALFYG
                     AVLIMIGHILMSLPNSLVLLLIALLFLIMGTGLLKPNISSTVGLLYDKNDARMDSAFT
                     IFYMSINLGALLSPLIIGWVQVNVGFHVGFAIAAVGMFFGLLAYIFTNKKSLGLAGVE
                     VPDPLTPTERSKLIKIIGSLTIILVIIGIALYTTGYLTIELFSNIITILGVFLPVFLF
                     TKIILSNKTAKHERKRVFAYIPLFIASVAFWMIQEQGSTVLAQFSDTKTQLELSKVTG
                     GLIDFHIPPAWFQSLNPFFIIILAPLFSILWMKLGRYNPPTVIKFALGVILAGLSYLI
                     MIIPDSNSLINPFWLVASFLLVTFGELCLSPIGLSTTTKLAPDAFAGQMMSIWFLSNA
                     MAQGLNAQMVKIYVHMSTNEYFLYSGLFAVAIGIILILITPLIKNLMQGVK"
     gene            1928..3430
                     /locus_tag="PTC28_001605"
     CDS             1928..3430
                     /locus_tag="PTC28_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HDK5716888.1"
                     /translation="MSELSHEKAVQEIPQKGFFGHPRGLGVLYTVEFWERFSYYGMRA
                     LLIYYIYYNVSQGGLGLEKTFAQSLIAVYGSLIFMTSILGGWVADRILGTRRSMFYGA
                     VLIIIGHICLSLPFGLTGLLSSMFFIIVGSGLMKPNISNIVGRLYPKDDSRVDSGFVI
                     FYMAVNMGAFVSPLVLDHFRNVGNFHGGFLIAAIGMGLSLLFYLLFHKRNLGRIGVAP
                     PNPLSPAEKKKYGMIFGLITAVIVLVVAIASMTGTLSFNLVSLIVLVLGFALPFVYFT
                     IMIVSKDTTDVERSRVIAFIPLFIVGVIFWSIQEQGANVLAVYADEKADLAFNLFGWE
                     SVFPVTWFQSINPFFIVVFAPVISWLWRRLGRFEPSLPIKFAIGLFLAGSSFILMMGV
                     IYAYNDANIWFVWIILSYIICVIGELCISPTGNSSAVKLAPENFNSQMMSLWLLTNAT
                     AQAINAQLVKLQPIIGNQNYFGLIGGIAIVVALLAVIGSPFILRAMKGIR"
     gene            3566..4498
                     /locus_tag="PTC28_001606"
     CDS             3566..4498
                     /locus_tag="PTC28_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family lipid kinase"
                     /protein_id="HDK5716889.1"
                     /translation="MAPQYEHGVLFYHQHSGLNKIHEGLGEVTVALTQLCKRFTIQLS
                     ENEGDIEKYCQRIQDQDNREGIDVLFILGGDGTVNELINGVLKYNLNLPVGIIPGGTF
                     NDFAKTLNLSTKAGPASQDLLLASPQKYDVMKVEDQYVLNFAGIGLMVQNAENVQGQS
                     KDLFGKLSYIMSTLKTLSNPKPFNYTLDIDGRTYTGETSMLLFANGRFIGGGKIPLME
                     MSPSDGELNTFIFNNYSMSILKDIFSLRDSMTWSEISDNIDHIPSRHIHVKTEPPMRV
                     DIDGEIALDTPVDIEIIPQAIELLTVEPGQAKDN"
     gene            complement(4584..5120)
                     /locus_tag="PTC28_001607"
     CDS             complement(4584..5120)
                     /locus_tag="PTC28_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'(3')-deoxyribonucleotidase"
                     /protein_id="HDK5716890.1"
                     /translation="MRTSIGIDMDEVLADTMGAILDELNRRTQLGVTIDQIAGKRIYE
                     IMPEHTKEIRNILASDGFFGRLNVMKDAQAVVKKLAEHYDIYIVTAAMDVPTSFHDKY
                     EWLLEHFPFLDSQQFVFCGRKDIVATDYLIDDNPRQLGGHTGKPLMFSAPHNEGNTDF
                     ERVNNWKEVEEYFFGKEA"
     gene            complement(5221..6270)
                     /gene="hisC"
                     /locus_tag="PTC28_001608"
     CDS             complement(5221..6270)
                     /gene="hisC"
                     /locus_tag="PTC28_001608"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011276431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDK5716891.1"
                     /translation="MKSQISKLRAYQPGLSPEKLKEKYGIEGELHKHASNENLFGPSP
                     KAKQAIKDHVDDLFLYPEPNAPLLQEAIANHYGVDKSQVLFGAGLDEMIVIISRTLVR
                     AGDNIVTSAGTFGQYLHNAVVEDAETIQVPLVEGSFDLDGIAAAVNDKTAAIWICNPN
                     NPTGTYHTHDDIVAFLEKVPSHIPVFMDEAYAEYVSAEDYPKTLELMKQYDNVALMRT
                     FSKAYGLAGLRIGYLISTPELAAQLNVIRPPFNTTRLSEQAALKALEDQEYLQQVVET
                     NRVEREKFFELETALKIYPSQTNFVFVETDRAEELDETLLRHGIIARLFPNGVRISLG
                     FPEQNEVIRHVLKSF"
     gene            complement(6595..8112)
                     /locus_tag="PTC28_001609"
     CDS             complement(6595..8112)
                     /locus_tag="PTC28_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease/substrate-binding
                     protein"
                     /protein_id="HDK5716892.1"
                     /translation="MNIFLETLNSRKGELFAALLEHIQLSFVALLIAVLIGVPLGILL
                     TKTKKLSEVVINIAAVLQTIPSLALLGLMIPLFGIGTVPAVIALVVYALLPILRNTYT
                     GITGVDYSLIEAAKGIGMKPIRRLTKVELPIAMPVIMAGIRTAMVLIIGTATLAALIG
                     AGGLGDLILLGIDRNHTSLILIGAIPAAILAILFDVILRMLSHTSYRKMLATLGVILL
                     FMLAVTIAPIFSNQNERITIAGKLGTEPSIITNMYKILIEDETDYTVSVKDGMGKTTF
                     LFNALKSGDIDGYLEFTGTVLGELTKESPKSKDEKEVYEQANASLENKFDMTLLRPMQ
                     YNNTYALAVKRDFAEEHNIKTINDLKKVESEIKPGFTLEFNDREDGYHAIQKVYHLNF
                     QNVKKMEPKLRYQAIESGDINLIDAYSTDAELKQYDMVVLDDDRKVFPPYQGAPLFKK
                     SFIEAHPDIEKALNQLEGKISDEEMQEMNYRVAEKDEDPYDVAKAYLKKQGLIDK"
     gene            complement(8109..9068)
                     /locus_tag="PTC28_001610"
     CDS             complement(8109..9068)
                     /locus_tag="PTC28_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5716893.1"
                     /translation="MIKFSNVSKYYDDRVVVNQVDIEINEGEFFVLIGPSGSGKTTTM
                     KMINRLIPLSEGYIYFKDRPISDYSVYEMRWDMGYVLQQIALFPHMTIRDNIAQVPLM
                     KGWTKEKIDARIDELLSMVGLDPEQFRDRKPEELSGGQRQRVGVVRALAVDPPVILMD
                     EPFSALDPITREKLQDDLLKLQDQIKKTIVFVTHDIEEAFKLGDRICLLNHGHIEQIG
                     TPNDFIKKPKNDFVCQFLGDLTSVVLNHFSLGKVVELAGEKATEAQLRQYPVVHADQT
                     VSDVYDELVQYEAVIVPVEGEQWSLSRQDIFSFLSKNQAGVSR"
     gene            complement(9307..11088)
                     /gene="recQ"
                     /locus_tag="PTC28_001611"
     CDS             complement(9307..11088)
                     /gene="recQ"
                     /locus_tag="PTC28_001611"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016424488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HDK5716894.1"
                     /translation="MEQTLSHYFGYKSFRPGQKEIIERVLNHHHTLGVLPTGGGKSLC
                     YQVPGLMFKGTTIVISPLISLMKDQVDQLTAMGISAAYLNSSLSTQAQKEIETQLVNG
                     ELKFLYIAPERFEQTYFEMLLRRVDISLVAFDEAHCISKWGHDFRPSYQAVIQRVLTM
                     PQQFSIVALTATATTEVQQDIMERLMISRQHLVKTSIRRRNLKFQVNGTYQRQKFVLD
                     YIQKHSQKAGIVYCSTRKQVEALYEALEDADIPVSYYHAGMTAKQRDEAQNDFLYDRT
                     RVVVATNAFGMGIDKSNVRYVIHYNMPGDLESYYQEAGRAGRDGLDSDCILLYSDRDI
                     ALHQYFIGASKADDDYKERMGEKLTKMIQYTKTTKCLEATLVHYFEPNEKLEECHQCS
                     NCIDKNKTYNMTKEAKMIISGVARLRQQEGYQTVIQVLRGEVSDYIRHQGYENLSTYG
                     LMKDYTTGELHHLIDELRFKGFLNEHDEILMCDASVEKLLSEDTQVFTRPFKRKSKET
                     VHINTVEGVDRTLFEKLVEVRREMSERLNMPPTNIFTDYTLEAFAKRKPVTKQEMIQI
                     DGVGSYKLKHYCPEFLEAIQEYKMHRS"
     gene            complement(11098..12975)
                     /locus_tag="PTC28_001612"
     CDS             complement(11098..12975)
                     /locus_tag="PTC28_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDK5716895.1"
                     /translation="MEAYKIERLNKSYADKVIFDDLQLSISNQERIGLVGINGTGKSS
                     LLKVIAGMDEDFDAVQSHPKQYRIRYAAQNHNLEPTLTVYEAVYSADSEELQVIKRYE
                     EATAQYAEQQTDKAFDAMMAAQADMDAYSAWDYSAEIKTILSKLGIHDTTRRMSELSG
                     GQQKRVVLARTLIEKPDLLLLDEPTNHLDFESIHWLIQFVKSYPKTVVFVTHDRYFLN
                     EVATRIVELRNGKLDTYPGNYEAYIAMRAEREEIEVRQQTKQRALFKQELAWMRAGVK
                     ARTTKQQARQDRFHDLKEQVQSHQVQGKGSLNLAYSRLGKQVFELENVTKRIDGRTLF
                     ENVSTLIQKGVQIGIVGPNGVGKTTMLNILAGEDQHFEGVLKIGQTVKVAYFKQTDER
                     LNRDVRVIDFLREESELARQKDGTTVSITQLLERFLFPSVTHGKKVYKLSGGEQKRLY
                     LLKLLVHQPNVLLLDEPTNDLDTETLTILEDYIQTFGGTVITVSHDRYFLDKVVDCYW
                     YIHDGQIDMILGQFEDYLAYQKQLEQAATQVASVKQQPTLQPKKKKGLSYNEKREYDM
                     LLVRIEETESRLAEIDAEMIEANADYAKIKALNEEKETLEAQYDTDMTRWSELEEILE
                     Q"
     gene            13087..13902
                     /locus_tag="PTC28_001613"
     CDS             13087..13902
                     /locus_tag="PTC28_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HDK5716896.1"
                     /translation="MLDYISNMPPFLQALLAGVITWLLTALGAATVFVFKSVNEKVLN
                     SMQGFAAGIMIAASFWSLLQPAIESSSGSTVPWLPAAIGFLLGGVFIRSLDYVIPHMH
                     RNATDESQHQEGVETSLNKNTLLLLAITLHNIPEGLAIGVAFGGIATGNEHATLLGAL
                     GLAIGIGIQNIPEGAALSLPIHASGQSKWKAFNYGQASALVEPVFATVGAAAVLVVTP
                     ILPYALAFAAGAMIFVVVEELIPDSQAGKNTDLATLSLMVGFTIMMILDVALG"
BASE COUNT         3989 a         2888 c         2510 g         4609 t
ORIGIN      
        1 aaaatcttgt gtatgatacc gatgagttat agaataagtt taacttgact tacatagggg
       61 ggtattatca atgagttcac attatacaaa ggaagaaatc ctaaatagta cgccacgtac
      121 gggattcttc gggcatccta aaggactcag tacgctagtg ttcacagaat tttgggagcg
      181 ttttagctat tacgggatga aagggatact agctttctat atctattatt cagtggctaa
      241 aggcgggttt ggtttagacc aaggtgtcgc acttcaaatc gtttcaattt atggcgcttt
      301 agtttatatg agtggggtga tcggaggttg gattgcagac cgtatcacag gcacacgtca
      361 cgcactgttt tatggtgctg tgctgatcat gattggccac attttaatgt cactcccaaa
      421 cagccttgtt ttattactta tcgcattact ctttttaatt atggggacag gtttgttgaa
      481 gccaaacatc tcctcaacgg ttggattgtt atacgataag aacgacgcac gcatggattc
      541 ggcatttacg atcttttata tgagtattaa tttaggagca ttactctcac cactcattat
      601 cggatgggta caagtcaatg tcggtttcca tgtcggcttt gcgattgcag ctgtagggat
      661 gtttttcggt ttattggcat atatattcac aaataaaaaa tcactcggtc ttgcaggtgt
      721 tgaagtgcca gacccattga ctccaacaga acgctcaaaa ttaattaaaa tcatcggaag
      781 tctgacgatc atactagtga ttattgggat tgcattgtat acaacaggct acttaactat
      841 tgaactattt tctaatatca tcacgatatt aggtgtattc ttgcctgttt tcttgtttac
      901 aaaaattatt ctaagtaaca agactgcaaa acatgaacgt aaacgtgttt ttgcatacat
      961 tccgttgttt attgcgtctg ttgccttctg gatgattcaa gagcaagggt caacagtttt
     1021 agcacagttt tctgacacaa aaacacaact tgaattatct aaagttacag gaggattgat
     1081 tgattttcat atcccaccag catggtttca atctttaaat ccatttttca ttattatttt
     1141 ggcaccttta ttctcaattt tatggatgaa actcggtcgt tataatccac cgactgtcat
     1201 taaatttgcg ctcggtgtta ttttagctgg tctttcatat ttaattatga ttattccaga
     1261 cagtaacagt ttgatcaatc cgttctggtt agtcgcgagc ttcttactcg taacgtttgg
     1321 tgaactttgt ttatctccta ttggcttatc aacaacaaca aaacttgcac ctgatgcgtt
     1381 tgcaggtcaa atgatgagta tatggttttt atcgaatgct atggcgcaag gtttaaacgc
     1441 acaaatggtg aagatttatg tccatatgag tacaaacgag tacttccttt attcaggact
     1501 cttcgcggtg gctatcggta taattttaat tttaattaca ccattgatta aaaatttaat
     1561 gcaaggcgta aaataaatta aatacttttt catacatatg agaggtttgg gcatgaatgt
     1621 accggacctc tcatattatt ttcaaaaact ttctagtgac actttatctc ctcattcgtt
     1681 acttccatcg tcaaacatgt agggtcgatt taaacataca tcctccccct ctttatttaa
     1741 acgttacttc catctatcgg cagcaaataa ccactataca aatagtgcat aattcaacca
     1801 tttatcactt tattttttat ctgaattttt aaaattttat tatttttaaa aaactaattg
     1861 ctatttattt tcatcaggcg taaactttct attatatgtt ttgttcagat aggaaggatt
     1921 gattgaaatg tcagaattat cacacgaaaa agctgtacaa gagattcctc aaaaaggatt
     1981 cttcggccat cctcgtggtc taggtgtatt atataccgta gaattctggg agagatttag
     2041 ttattacggt atgcgtgccc tattgattta ctacatttac tacaatgtca gtcaaggtgg
     2101 cttagggctc gagaaaacat tcgctcaatc gttgatagct gtgtatggct cgttaatctt
     2161 catgacatct attttagggg gctgggtagc tgaccgaata ctggggacaa gacgctccat
     2221 gttttatggt gctgtgttaa ttattatcgg tcacatttgt ttaagcttac cgtttggttt
     2281 aacaggacta ctgtcatcaa tgttctttat tattgtaggg tcaggtctga tgaaacctaa
     2341 catttcaaat attgtggggc gtctctatcc taaagacgat agccgtgtag attcaggatt
     2401 cgttattttc tatatggccg taaatatggg ggcgtttgtt tcaccacttg tgttagacca
     2461 ctttagaaat gtcggtaact tccacggtgg cttcttaatt gctgcgattg gtatggggct
     2521 gtcactcctt ttttaccttt tatttcataa gcgtaatcta ggacgtattg gcgtcgcacc
     2581 accaaatccg ttaagccctg cagaaaagaa aaagtatggg atgattttcg gtctgattac
     2641 cgctgtgatt gtcttagttg ttgcgatcgc atctatgact ggaacacttt cttttaattt
     2701 agtgagttta atcgtattag ttttaggatt tgcattacca tttgtttatt ttacgattat
     2761 gattgtaagt aaagatacaa cagatgttga acgttcacgt gttattgcgt ttattccttt
     2821 atttattgtc ggtgttattt tctggtcgat tcaagaacaa ggggctaacg tccttgccgt
     2881 atacgcggat gaaaaggcag atcttgcttt caacttattc ggctgggaaa gtgttttccc
     2941 tgtgacatgg ttccaatcga ttaacccatt tttcattgtc gttttcgcac cagtgatttc
     3001 ttggctatgg agaagattag gacgttttga gccaagttta ccaattaagt ttgcaatcgg
     3061 tttatttcta gcaggtagct cgttcatact gatgatgggt gtgatttatg cttacaatga
     3121 cgccaacatt tggtttgtat ggattatctt gtcctatatt atttgtgtga ttggtgagct
     3181 ttgtatttca ccaacaggaa atagttcagc tgttaaactt gcacctgaaa acttcaactc
     3241 tcaaatgatg agtttatggt tattaacgaa tgcaacagca caagcgatta atgcacaact
     3301 tgtgaaactt caacctatta ttgggaatca aaactatttc ggtcttattg ggggcatcgc
     3361 tatcgttgtc gcgcttttag ccgtcatcgg ttcaccattt attttaagag ctatgaaagg
     3421 tattcgttaa catcacaata aggtgagtat acgtttggga cacccctcgt gtactcaccc
     3481 tttttttact ttgaagttat catgattaac atcaacacaa ttgcggtata caatgaagtg
     3541 tacgtgaatt gaaaggagca atcttatggc accacaatac gaacacggcg ttctttttta
     3601 tcaccaacat tcaggactca acaaaataca tgaaggcttg ggtgaagtga ctgtcgcgct
     3661 gacccaactc tgcaaaagat ttaccattca attaagtgaa aatgaaggtg acatcgaaaa
     3721 atattgtcaa cgtatacaag accaagacaa tcgcgaaggc atcgatgtcc tcttcatttt
     3781 aggtggcgat ggaacagtca atgaattaat taatggtgtc ttaaaatata acttaaacct
     3841 cccagtcggt attattccag gtggcacgtt taatgacttt gcgaaaacat tgaatttatc
     3901 tactaaagca ggcccagcga gtcaagattt gttacttgca tcacctcaaa aatacgatgt
     3961 gatgaaagtt gaagatcaat atgtattaaa ctttgcgggc atcggtttga tggtacaaaa
     4021 tgctgaaaat gtacaaggtc aatctaaaga cttgttcggc aaactaagtt atattatgtc
     4081 aacacttaaa acactttcta acccaaagcc tttcaactat acattagaca ttgatggtcg
     4141 aacgtataca ggtgaaacgt ccatgttgtt atttgcgaat ggtcgtttta tcggtggcgg
     4201 caaaattccg ctcatggaaa tgtcgccctc tgacggtgag cttaatacgt ttatttttaa
     4261 taattacagt atgagtattc ttaaagatat ttttagctta cgtgatagta tgacgtggag
     4321 tgaaattagc gacaatatcg atcatattcc aagtcgtcac attcatgtga aaactgagcc
     4381 gccaatgcgc gtcgatatcg atggtgaaat tgctttagat acaccggttg atattgaaat
     4441 cattccgcaa gcgattgaat tattgacggt agaaccaggt caagcaaaag ataactagcg
     4501 aaaagcaaaa aaagcagtga cgcactacaa tggcgtcact gctttttgct gctgtggatt
     4561 aaaaaatgct aacctattaa acgctatgct tccttaccga aaaagtattc ttctacttct
     4621 ttccagttat tcacacgttc aaaatcggta ttcccctcat tatgtggcgc tgaaaacatt
     4681 aacggcttcc ctgtatgtcc ccctagttga cgcggattgt catcaattaa ataatccgtc
     4741 gcgacaatgt ctttacggcc acagaacaca aattgttgtg aatctaaaaa tgggaaatgt
     4801 tccaataacc attcgtattt gtcatggaaa gatgtcggca catccattgc agctgtgaca
     4861 atataaatgt catagtgctc ggctaatttt ttaacgaccg cttgcgcatc tttcatcaca
     4921 tttaaacggc caaaaaagcc gtctgatgcc aaaatattac ggatttcttt cgtatgttct
     4981 ggcatgattt cgtaaatacg tttcccagcg atttgatcga ttgtcacacc taattgtgta
     5041 cggcgattca actcatctaa aatcgccccc atcgtatctg ccagtacttc atccatatcg
     5101 atccctattg aagttctcat gttatcgctc cttgtataca ttcatctcat cgctttatca
     5161 taacatactt tgtctcagcg tttgatgatt cccacacaaa ctcgaatgtc attgtttagg
     5221 ttaaaatgat ttcaacacgt ggcgaatcac ttcattttgt tctggaaaac ctaatgaaat
     5281 acggacacca ttagggaaaa gacgcgcaat aatgccgtgg cgtaacaagg tctcatccaa
     5341 ttcttctgca cgatctgttt ctacaaagac aaagtttgtt tgagacggat aaattttcaa
     5401 agctgtttca agctcaaaaa acttttcacg ttccacgcgg ttcgtctcca cgacttgttg
     5461 tagatattcc tggtcttcta acgctttcaa tgcggcttgt tcagataaac gtgtcgtatt
     5521 aaatggcgga cgaatgacat tgagttgtgc agctaattct ggcgtagaaa tgagataacc
     5581 gatacgtaaa cctgctaaac catacgcttt agagaacgta cgcattaacg cgacattatc
     5641 atattgcttc attaattcta acgtttttgg ataatcttct gcagagacat attccgcata
     5701 agcctcatcc ataaatactg gaatgtgtga aggtaccttt tctaaaaatg ctacaatatc
     5761 gtcatgtgtg tgatatgttc cagttggatt gttcggatta caaatccata tcgctgctgt
     5821 tttatcattt actgctgctg cgataccgtc caaatcaaat gacccttcca ccaatgggac
     5881 ttgaatggtc tccgcatctt ctacgaccgc attgtgaaga tattggccga acgtccccgc
     5941 actcgtcaca atattgtccc ctgcacggac taacgttcta gaaataatca caatcatttc
     6001 atcaaggccg gcaccaaaaa gaacttgtga tttgtctaca ccataatgat ttgcaatggc
     6061 ttcttgtagc aatggtgcat tcggttcagg gtataaaaag aggtcatcca catgatcttt
     6121 aatcgcttgt ttcgctttag gagatggacc aaataagttt tcattagaag catgtttgtg
     6181 aagctcaccc tcaatcccat acttttcttt taatttctcc ggtgacaatc caggttgata
     6241 cgcacgtaat ttagaaattt gtgatttcat ttctaaacct cctataaatc agaattttta
     6301 aaatatagtt actagtataa ccattaacgc tttaaaatgc tagagtatcc gtctatttat
     6361 tcgtagtcta tcaaaggttc aaataaaaat tttgatcacg cacaagtaaa aagacgatgt
     6421 cgtacgtgta tcataatgac aaccggataa taccattgat atagaacaac tggaccatga
     6481 cgcctctcca aaagttttga aagacaacaa cagtccagtc gtttttatac tatttctaat
     6541 aaagtcaaca aattgttcgg caacctatca acaaatgaga cgcaaacaat agcactattt
     6601 gtcaatcaag ccttgtttct tgagatacgc tttcgcgaca tcataaggat cttcatcttt
     6661 ttcagcaaca cgataattca tttcttgcat ctcttcatca gatattttac cttcaagttg
     6721 gtttaaagct ttttcaatat ctgggtgcgc ttcaataaat gattttttaa acagtggtgc
     6781 accttgatac ggtgggaata ctttacggtc atcatcaagc acgaccatat catattgttt
     6841 taattctgca tctgtcgaat atgcatcaat taaattaata tcaccacttt caatagcttg
     6901 ataacgcaat ttaggctcca tctttttcac attttggaag tttaagtgat acactttttg
     6961 aatcgcatga taaccatctt cacggtcatt aaattcaagt gtgaaacctg gcttaatctc
     7021 gctttcgact tttttcaaat cattaatcgt tttaatgttg tgttcttcgg caaagtcgcg
     7081 cttgactgct aatgcgtacg tattgttgta ttgcattggt ctcaacaacg tcatatcaaa
     7141 tttgttttcc aaacttgcat ttgcttgttc atatacttct ttttcgtctt tagatttcgg
     7201 tgattcttta gtcaactcac ctaatacggt acctgtaaac tccaaataac catcaatatc
     7261 acctgatttt aatgcattga ataaaaatgt tgttttaccc ataccgtctt tcactgacac
     7321 agtataatct gtttcatctt caattaaaat cttgtacata tttgtaatga ttgacggttc
     7381 tgtaccaagc ttcccagcaa tcgtaatacg ttcattttga ttagagaaga tgggtgcgat
     7441 agtaactgcc aacatgaaca gtaatatcac accaagtgtc gctaacattt tacggtaaga
     7501 cgtatggctt aacattctta aaatcacatc aaacaaaatt gctagtatcg ctgcaggaat
     7561 cgctccaatt aaaatcaatg aagtgtgatt acgatcaatt cctaataaga taaggtcacc
     7621 taatcctccc gcaccaatta atgccgctag tgtagctgta ccaataatca agaccattgc
     7681 tgtacgaata ccggccataa tgactggcat ggctatcggt aactcaactt tagtcaaacg
     7741 acgaataggt ttcatgccaa tgccttttgc tgcttctatt aacgaataat caacacctgt
     7801 aattcccgta tacgtattac gtagaatagg taataatgcg taaacaacaa gcgcaatcac
     7861 cgctggtacc gttccaatac cgaacaatgg aatcataagg ccaagtaaag caagcgacgg
     7921 aatggtttgt aagactgctg caatgttaat cactacttca gataattttt tagtttttgt
     7981 tagtaagata ccaagcggta caccgattaa cacagcaatc agtaatgcga caaacgaaag
     8041 ttgaatatgt tcgagtaagg cagcaaataa ctcacctttt cgactattca atgtttctaa
     8101 aaatatattc atctactgac acctgcctga ttttttgata agaagctaaa gatgtcttgg
     8161 cgcgataaag accactgctc accttcaact ggcacaatga ccgcttcata ctgtaccagt
     8221 tcatcataaa catcactcac tgtttgatct gcatggacga ctggatattg acgcaattgt
     8281 gcctctgtcg ctttttcgcc tgcaagttct acaactttac cgagtgagaa atgattcagt
     8341 acaacactcg tcaagtcacc tagaaattgg caaacgaaat cattttttgg ttttttgata
     8401 aaatcgttag gtgtgccgat ttgttctatg tgaccatgat tcagtaagca aatgcgatct
     8461 cctaatttaa aagcttcttc tatatcatgt gtcacgaata caattgtttt cttaatttga
     8521 tcttgtaact ttaataagtc atcttgtagt ttctctcggg taattggatc taacgcacta
     8581 aaaggttcgt ccattaaaat taccggtgga tctactgcga gcgcacggac aactccgaca
     8641 cgttgtcgtt gcccacctga gagttcttca ggttttcggt ctctaaactg ttctggatcg
     8701 agcccaacca tcgataatag ttcatcgatg cgtgcatcaa tcttttcttt tgtccagcct
     8761 ttcatcagcg gtacttgtgc gatgttatca cggatagtca tatgcggaaa taaggcgatt
     8821 tgttgtaaca cataccccat atcccagcgc atttcgtata cagaataatc actaattgga
     8881 cggtctttaa aataaatgta gccttcagat aatggtatta atcggttaat cattttcatt
     8941 gtggttgttt tacctgagcc agatggacca atcaaaacga aaaattcacc ttcgttaatc
     9001 tcaatatcca cttgattgac aacgactcgg tcatcatagt acttagaaac attgctaaat
     9061 tttatcatac aatccctcta tctttctgtt ttcaattaat tttactgata tacaattcat
     9121 ttccccaaat ggctagacac aatattcatt aaaacataat tcattgtaaa aataacacaa
     9181 tttgcatcta aaaaatttaa atcatctact atcgacacgt ctcacttttc cattctttac
     9241 cactcaataa gaaatcgttt atttgtaaaa aaggagccag gaattccccc agctccatct
     9301 gatgttttac gaacgatgca ttttatattc ttgaatcgct tctaaaaatt caggacaata
     9361 gtgcttcagc ttataactac caacaccatc aatctgaatc atttcttgct ttgtgacagg
     9421 ctttcttttc gcaaaagctt ctaacgtata gtctgtaaaa atattcgtcg gtggcatgtt
     9481 taatcgttcg ctcatttcac gtctgacttc gacaagcttt tcaaataacg tgcggtcgac
     9541 cccttctaca gtgttaatat gcactgtttc tttcgactta cgcttgaacg gccttgtaaa
     9601 cacttgcgta tcctcactca ataacttttc tactgaggca tcacacatga gtatttcgtc
     9661 atgttcgttg agaaagcctt taaagcggag ttcatcgatt aaatgatgta actcgccagt
     9721 cgtataatct ttcatcaaac catacgtcga aagattttca tagccttgat gacgaatgta
     9781 gtccgaaacc tcgccacgca aaacttgaat gaccgtttga tatccttctt gttgacgtaa
     9841 acgtgcgaca ccgctaatga tcattttcgc ttctttcgtc atattgtacg ttttattttt
     9901 atcaatacaa ttactacatt ggtgacattc ttcaagtttt tcattcggct caaaataatg
     9961 gactaatgtt gcttctagac atttcgtcgt tttcgtatat tgaatcattt tcgtcaattt
    10021 ttcgcccata cgttccttgt aatcatcgtc cgctttcgag gcaccgataa aatactgatg
    10081 taaagcaata tctcgatcac tgtacaataa aatacaatca ctatctaatc cgtctcgacc
    10141 tgcacgtcct gcttcttgat aatacgattc caaatcaccc ggcatattgt aatgaatgac
    10201 ataacggaca ttcgatttat caattcccat accgaatgcg ttggtcgcaa cgactacacg
    10261 agtacggtca tataaaaagt cattctgggc ttcatctctt tgtttcgctg tcattcctgc
    10321 atgatagtag gatacaggga tatctgcgtc ttctaaagct tcatacaagg cttctacttg
    10381 tttacgcgtt gaacaataaa caatccccgc tttctgacta tgtttttgaa tataatccaa
    10441 tacaaacttt tgacgttgat acgtcccatt cacctggaac ttcaaattac gtcgacgaat
    10501 actagttttg actaagtgtt gtcgcgaaat cattaaccgt tccataatat cttgttgcac
    10561 ttcagtcgtc gctgttgcag tcaatgcgac aatcgaaaac tgttgcggca tggtcaatac
    10621 gcgttgtatg actgcttgat aactcggccg aaaatcatgt ccccattttg aaatacagtg
    10681 tgcttcgtca aatgcgacga gtgaaatatc gacacgtcgc aacaacattt caaaataagt
    10741 ttgctcaaaa cgttccggtg cgatgtataa aaatttcaac tcaccattga ccaattgcgt
    10801 ttctatctct ttttgtgctt gcgtacttaa actactattc aaataagccg cagatattcc
    10861 cattgcggtc aattggtcca cttggtcttt cattaacgaa attaaaggac taatgacaat
    10921 ggtcgttcct ttaaacatca atcccggtac ttgataacat aacgatttac ccccacctgt
    10981 gggtaacacc cctaacgtat gatgatgatt caatacgcgt tcaataattt ctttttgacc
    11041 aggacgaaaa gatttgtatc caaaataatg cgacaatgtt tgctccatgc tatccctcta
    11101 ttgttctaat atttcttcta gttcactcca ccgcgtcatg tcggtatcat attgagcttc
    11161 gagcgtttct ttttcttcat ttaatgcttt gattttggca taatctgcgt tcgcttcgat
    11221 catttcggcg tcaatttcag ccagacgcga ctctgtttcc tcgatgcgca ctaataacat
    11281 gtcatattct cgtttttcgt tgtatgataa tccttttttc ttttttggtt gtaatgtcgg
    11341 ttgttgtttc acggacgcta cttgagttgc tgcttgttcc aattgttttt ggtatgctaa
    11401 ataatcttca aactgcccta aaatcatgtc aatttgaccg tcgtgaatat accaataaca
    11461 atccacgact ttatctaaaa agtaacggtc atggctcaca gtaatgacgg taccgccaaa
    11521 tgtttgaatg tagtcttcta aaatcgttaa cgtttctgta tccaaatcat ttgtcggttc
    11581 gtctaacaac aacacgttcg gctgatgcac taacaacttc aataaataca aacgcttttg
    11641 ttcgccacct gagagtttat acactttctt accatgcgtc acactgggga ataaaaagcg
    11701 ttccaacaat tgcgtaatcg aaacggtcgt cccatctttt tgacgcgcca actcactttc
    11761 ttcacgcaag aaatcaatga cacggacatc acgattcaat cgttcatccg tttgtttaaa
    11821 atatgccact tttaccgttt gacctatctt taatacacct tcaaaatgct gatcttcacc
    11881 tgctaaaatg ttcagcatcg tcgttttgcc gacaccgttt gggcccacaa taccgatttg
    11941 aacacctttt tgaatcaatg tcgacacgtt ttcaaataat gtacggccat caatacgttt
    12001 cgtcacattt tcaagttcaa agacttgttt gcctaagcgc gaataagcca gattcaatga
    12061 ccctttccct tgcacttgat gcgattgtac ttgttctttc aagtcatgaa aacgatcttg
    12121 ccttgcttgt tgcttcgtag ttcgcgcttt gacaccggca cgcatccacg ctaactcttg
    12181 tttaaaaagt gcacgttgtt tcgtttgttg acgcacttcg atttcttccc gctctgctcg
    12241 cattgcaata tacgcttcat agttacctgg atatgtatct agcttgccat ttcgcaattc
    12301 tacaatacgc gtcgccactt catttaaaaa gtaacggtca tgcgtgacaa aaacgactgt
    12361 tttcggataa gactttacaa attgaattaa ccaatgaatc gattcgaaat ctaaatggtt
    12421 cgtcggttcg tctaataata ataaatctgg tttttcaatc aacgtacgcg ctaacactac
    12481 gcgcttttgt tggccacctg agagttcact cattcggcgt gtcgtatcat ggatgccaag
    12541 tttcgataaa atcgttttaa tttcagcact ataatcccaa gcactgtaag catccatatc
    12601 agcttgtgct gccatcattg catcaaacgc tttgtcagtc tgttgctctg cgtattgtgc
    12661 agtagcttct tcataacgtt taatgacttg caactcttcg gaatctgcac tataaaccgc
    12721 ttcataaacc gttaacgttg gctccaaatt atgattttgt gccgcataac gaatacgata
    12781 ttgtttcgga tgcgattgaa cggcatcaaa atcttcatcc atgcctgcga tgactttgag
    12841 caatgaactt ttccccgttc cattaatacc aactaatccg attcgctctt gattggaaat
    12901 ggataactgt aaatcatcaa aaatgacttt atccgcataa gatttgttga ggcgttcaat
    12961 tttatacgct tccacaacac atacaccctt tttcttatag atttactcgc atttatctgt
    13021 taaccttaaa tcagttctat atattataca ctttttttgg aacaaatgat acaaggagct
    13081 atttctatgt tggattatat ttcaaacatg ccaccctttt tacaagcatt acttgcaggt
    13141 gtcatcacgt ggttattaac cgcattaggg gctgcaaccg tatttgtatt taaaagtgtc
    13201 aacgaaaaag tgttgaattc gatgcaaggc tttgctgctg gtattatgat cgccgcaagt
    13261 ttttggtcat tactccaacc ggccattgaa agcagttcgg gcagtactgt accgtggctc
    13321 cctgctgcaa ttggcttttt actcggcggg gtattcatcc gttctttaga ctatgttatt
    13381 ccacacatgc atcgaaacgc aactgatgaa tcacaacatc aagaaggtgt tgagacgagt
    13441 ctaaataaaa acacactttt attacttgcg attacattgc ataacattcc tgaagggctc
    13501 gcaatcgggg ttgcctttgg tggtattgcg acaggaaatg aacacgcaac tttgttaggg
    13561 gcactcggac ttgcaattgg tattgggatt caaaacattc ctgaaggggc tgcattatca
    13621 ttaccgatac atgcttcagg acagtccaaa tggaaagcct tcaactatgg acaagcttca
    13681 gcacttgtag aacctgtttt tgctacagtg ggcgcagctg ctgtgttggt cgttactccg
    13741 atactaccat acgcactcgc ttttgctgca ggggcgatga tttttgtcgt cgttgaagaa
    13801 ttaattcctg attcacaagc cggtaaaaac acagatcttg cgacactaag cttgatggtt
    13861 ggctttacca tcatgatgat attagatgtt gctttagggt aaattcaaaa aaccgttcaa
    13921 tgtgatgaaa cactgagcgg ttttttgatg tgtacatata tcgatacatt aaaaatactc
    13981 tttaacaact cacaac
//
LOCUS       DANHPA010000068        13970 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.068, whole genome shotgun sequence.
ACCESSION   DANHPA010000068 DANHPA010000000
VERSION     DANHPA010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 13970)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13970)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13970
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.068"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(475..1161)
                     /locus_tag="PTC28_001614"
     CDS             complement(475..1161)
                     /locus_tag="PTC28_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HDK5716897.1"
                     /translation="MMILQGIAMIVLTVVMFILSKKIYHKFNSPILNPALVTSLGVIA
                     ILLLFNIDYHSYMVGGQWINQLLSSTVVCLAFPLYLNRHKIVKYFKTIFVSVFTAVIL
                     NFSLIYFSLKLLGYGREDIVTLLPRSITAAVGIQVSHQLGGEDTVTILFIIATGLLGS
                     MIGASLVRMTNFQSSIARGMTFGNASHAFGTARAFEMDLESGAFSSIGMILSAVMSSV
                     MLPILLMLFY"
     gene            complement(1158..1550)
                     /locus_tag="PTC28_001615"
     CDS             complement(1158..1550)
                     /locus_tag="PTC28_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019164941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HDK5716898.1"
                     /translation="MAKVKQLLKTVTQLCIIYGITMLGNQIQQFFNIPLAGSIIGLLL
                     FFILLQFKIVKVEWIKEGANFLLATMVFFFVPSVIGLMDVVSELNLNFIIFFTLVAVG
                     TVLVAYSSGLVAEKMVTGRIFRKGQNPS"
     gene            complement(1628..2557)
                     /locus_tag="PTC28_001616"
     CDS             complement(1628..2557)
                     /locus_tag="PTC28_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDK5716899.1"
                     /translation="MDIKQMKYFIEIVRQGGMTRAAETLYIAQPTISKAIKELESEIG
                     EPLFDRTRRQLLLTDVGEVFYHKAVEILKLYESLPNEISSLLGLEKGYISIGISALMD
                     MERLVQVLGQFHQQYPNVVFNLDENGGKTIENQVRNNDIHLGLTSLPVDSKLFDSFPL
                     YKGEFQVVMHHTHPLAQKENVTFKDLKDEDFIMFNEDFYINDKIIALTRQAGFVPHIV
                     SKISQWQFIEHLITAKMGISILPDNIVRIISRNPEIRVLSIDDSTVDWTMGVIWRKDV
                     YLNHATQTFLDYLNIQLPLTTVHENHSIDKSND"
     gene            2715..3944
                     /locus_tag="PTC28_001617"
     CDS             2715..3944
                     /locus_tag="PTC28_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5716900.1"
                     /translation="MTLPKNVKLRLLMLFIQNASVNAVFPFMALLLTHYLGGKKAGMM
                     LIIGILLKFSGSIIGGYLSDHLPLKKNVIACLTLMSAFLFLGMGAVLAQLEGVQSFQL
                     LFVVFLACYLLNELLTALAKPMYNALALDSIDETHRQRYARFKYWISNTSTALGMLMG
                     GLFYGSFKVSLFVLIYICLTVNVLILYFGVQETRRTISHPSARRFVAIFQRYQVAYRN
                     RPFVLLLISSMLILSAEMSLSSYVAVRLEHQFKTIQLYDFPIDGVRMFSILLLINTIT
                     IISLSFAILHYFKRFKVATILNIGFLFFAGGYTVVMSNNHALVLVIFMLMATIGEILF
                     TPTVEAEKIRFIPADTRGAHSALDSWVPIGAELISRLFLIIGTLLTPLMMSGLVLATV
                     ITGFLLLLSTVKRYEAV"
     gene            complement(4301..5533)
                     /locus_tag="PTC28_001618"
     CDS             complement(4301..5533)
                     /locus_tag="PTC28_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HDK5716901.1"
                     /translation="MTILMLSSTDHAKTPYNEWFPDTAEQMILFCPAEKKDSYADEDY
                     LRIEAFEHYTVNPDIEMRALELSQQYDISHVLSISEFDVIRAAKIRALLKIEGQSLIS
                     AEAYRDKVLMKQLLQSTSVKTPHFDKAIDSANIQRFVGKYGYPVVLKPIDGSGSSDVV
                     IARAQQDIDTFLQTHPDIGRYEIEQFIDGEMYHVDGLVHNAEVKCAYVSHYYNGCLAF
                     KDHQPLASYMLKADNPLSQALQQQVEQVVAALPTLPSGSFHAEFFVTPTNDIYFCEIA
                     SRTGGGEIGRTLEHAIGMQLNQMSLYLQTGRAEEVEAHIQIQRYGGFILLPPQNATFQ
                     GIQHPLEEDWVLFQSLKATPGQPFGAAQLSVDHIMSVVVEGEDEATLIARIDQVITWY
                     QQEVQWKSLQATTYNDNV"
     gene            complement(5530..6777)
                     /locus_tag="PTC28_001619"
     CDS             complement(5530..6777)
                     /locus_tag="PTC28_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HDK5716902.1"
                     /translation="MKTLLFINLRSHKVERIAPVIEAKRQGYRVVLMTDHDPQLIDSG
                     LDEVIEIDTYDETAVVEAVIAYHQQHHLSGILTWSDKDVELVAQLNDRLQLPGIPVSY
                     VKNARNKYLMRMAFDQVPDISPDYENVRSEVDLRHAVARIGTPGILKPVGASGSKGIF
                     KIESEECIEYVYETLRHATSPERDKVYHYYPNDYIYEGYLVGEEVSVEGVVQNGEVRI
                     AGITDKAVTPEYSLEYIAIFPSDKNAALQQEIKTKATQAIQSLGIDHCAFHLEGRVTK
                     DGFKVIESAARPGGGFIASHLIPGASGHSFIEKILDVAVGNDVTENWPTFDQTSKKMC
                     FYSVMAEQAGIFKGIQGLDRLVEIPGVHYVVSLKNYGDSVILPPEHFSSCFVLNIVFE
                     AESTEAVQQKIDWIHEVIEVIVE"
     gene            complement(6796..8481)
                     /locus_tag="PTC28_001620"
     CDS             complement(6796..8481)
                     /locus_tag="PTC28_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716903.1"
                     /translation="MKQKGFEQLLEETHAKVTQLDQPLAVIDTMLTLDGKIPLEIARQ
                     SLNFEQWAIYQHLAHGTCLFTDEKPSDSEHVISFGMSAYGRLHLGPSFNDDYTQIWGY
                     VTLTTEAMTEIEQLTTRLHTEEMLRYQSEVVPFFQRLEPQEVIEVIDAIKEKVDFMAP
                     VLLYYNSHTYTTFYHYNNLLKSLEGDTTHFLLDELAEKNKDTWTKDERIVIFNLYTLL
                     QSGPPARGEEVNGVHFSLHYLSHYLEEKLAVYQEMTDTPSKPVPKSLLAKSRLICQLR
                     EKVAENYVIYRKINGLNLHKQEQFLNQQEVGLYRDEAMENELAQILGMASEQTYYDAF
                     LNDIAQHPDMTTIQTLLEKVVGYAIRATHSDVGMTRGFRYPWMYYDALKHHQLETIFE
                     WKQQMYFCCAIPSEAMKQAFRNQSQKLVGILTAISKRMEYNSWHYTPGNFLYERHRIQ
                     RHYYFPPVMSDITEWSNQHHKGHVFANVKHAIRCPGAIQCPPYTLNAYYDLRLMKTSG
                     VVYSEIDLMKALYYRRVVGALYQAWFDYCREHQSQLDMAAYDRKWYQQQFIEV"
     gene            complement(8481..8741)
                     /locus_tag="PTC28_001621"
     CDS             complement(8481..8741)
                     /locus_tag="PTC28_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HDK5716904.1"
                     /translation="MSYYAYVDRDMCIACSACGAAAPRLFRYDAQGIAYMCLDCNSGT
                     AQIPECDLGNLDDAVENCPTSAITVGQQPFSLPIILDREKEL"
     gene            complement(8944..9366)
                     /locus_tag="PTC28_001622"
     CDS             complement(8944..9366)
                     /locus_tag="PTC28_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDK5716905.1"
                     /translation="MFSNILVPYDFGNSFKNVPEQLKKLTGNDAPYEIVVFNVISETE
                     LANYVRYQGKHFEEVVEEKKKEMKPFLKTIEDVGLSYKVKFATGSPTKEIVNEVGNEH
                     YDIVVMSNKRSEMDIKHVLGHVTHKIAKRVNIPVLIVK"
     gene            complement(9666..10568)
                     /locus_tag="PTC28_001623"
     CDS             complement(9666..10568)
                     /locus_tag="PTC28_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HDK5716906.1"
                     /translation="MDIVILAGFLGGGKTSTLNFLIQDAIDQELKPAVMMNDFGAKNV
                     DAQLVTEDVKMEVLTNGCICCDLKANVSQQLHELYLTHQPDIVFIECSGAAHPVEVFD
                     ACMTPVLAPFIQDLSVLGIVDAAAYESRDTLPETIQTLMDEQIRYCSHLIINKIDLLE
                     SDQLLAVVQTIQQRYPDIPYILTRYGEITLQEIQHASKYDMSERSSVHHHGHLSHMLY
                     EFQSPIQQSALIEGLKGLKDVFRVKGFVYFKGCETPYVVQYTPGHLELKPCPIEMSPY
                     LVVVGHDLNDADITETLDIIEFSS"
     gene            complement(10569..11114)
                     /gene="dcd"
                     /locus_tag="PTC28_001624"
     CDS             complement(10569..11114)
                     /gene="dcd"
                     /locus_tag="PTC28_001624"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HDK5716907.1"
                     /translation="MILSDSDIKAYLERQLLNIEPLVEAHIEPASVDLTLGSHFLKPI
                     PPETGVQRMSDPIAYETIEQPRVVIPAHAFILATTEEYITLPQQLTGFIEGRSSVGRA
                     GLFIQNAGWVDPGFEGKITLELYNANDFPLEIEQGQRICQIVLAETKTVPETKYQGKY
                     QGQHTTTGSRLFRDWMKDGGD"
     gene            complement(11454..13169)
                     /gene="ureC"
                     /locus_tag="PTC28_001625"
     CDS             complement(11454..13169)
                     /gene="ureC"
                     /locus_tag="PTC28_001625"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002447295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit alpha"
                     /protein_id="HDK5716908.1"
                     /translation="MSFKMTESQYTSLYGPTVGDSIRLADTDLFAKVEKDYARYGDEV
                     TFGGGKSIRDGMGQNPNATRDNKAVADLVISNAVVIDYDKVIKCDIGVKNGYIMKLGK
                     AGNPDIMDGVDIIIGSSTDVIAAEGMIVTAGGIDTHVHFINPEQAEVALESGITTHIG
                     GGTGASEGSKATTVTPGSWYIHRMLQAAENLPLNIGFTGKGQAVNPTALVEQIHAGVI
                     GLKVHEDWGATPSALRHALEVADDYDIQIALHADTLNEAGFMEDTMKAIGDKVIHMYH
                     TEGAGGGHAPDLIKSAGYPNVLPSSTNPTLPYTHNTIDEHLDMVMITHHLNASIPEDV
                     AFADSRIRKETIAAEDVLQDMGVFSMISSDSQAMGRVGEVITRAWQVAHRMKQQRGPL
                     EGDSEYDDNNRIRRYIAKYTINPAITHGISEYVGSVDAGKLADLVIWDPRFFGVKPDM
                     VVKGGMINVAANGDANGSIPTSEPIKYRHMYGQYGGNLQSTAITFVSQAAYMNGIRRT
                     LDLKRDVRPVRNIRQLTKKDMKNNSALPKLDVDPETYEVFVDGKKVTSEAATELPMTQ
                     RYFLF"
     gene            complement(13166..13522)
                     /locus_tag="PTC28_001626"
     CDS             complement(13166..13522)
                     /locus_tag="PTC28_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit beta"
                     /protein_id="HDK5716909.1"
                     /translation="MKPGEIIVNSTEIMINEGRENTKLKVKNTGDRPVQVGSHYHFFE
                     ANPALSFEREEAYGKHLDIPAGAAVRFEPGDEKEIRLVRYAGKQHVYGFHGLVDGPLD
                     QSRITAPNMTEGSEVK"
     gene            complement(13535..13837)
                     /locus_tag="PTC28_001627"
     CDS             complement(13535..13837)
                     /locus_tag="PTC28_001627"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001832402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit gamma"
                     /protein_id="HDK5716910.1"
                     /translation="MHFTQREQDKLMIVVAADLARRRKARGLKLNHPEAVALISYEIL
                     EGARDGKTVAELMSYGREILSKDDVMEGVEAMVTDIEIEATFPDGTKLITIHHPIV"
BASE COUNT         4043 a         3065 c         2413 g         4449 t
ORIGIN      
        1 aaaagttttg gtatacatgc ctaacggtac tctctcattt ttatgtactc catttgagat
       61 tataaattgg gttgaaaggt ctataaataa gacagaaatt gggaaaactt aatatcccag
      121 ttcccatatg atccatacac catctgttat ggaaaatagg tttatacatt aaaaataaca
      181 tgagtgatta ctgacgcagc caacatatga ttgagtgcta gtaaaaaata ggaaatggag
      241 agtatctata gtgtttgtat ctcctatctt tacgatatca agcttgaata ccacacaact
      301 accttttcta ttgtttttaa tgccatgact gtaatacttg gaatgtaata tgaataaaga
      361 aagaatgtct atgattggta attctttaag gttaatttta gggaatatca aatctttcaa
      421 cctcaaaaaa accaccatgg catatatagg ggttggccat gatggttttg aatattaata
      481 gaacaacatc aatagtattg gaagcatcac agaactcatg acggctgata atatcatacc
      541 aatcgaacta aatgcacctg actctaaatc catttcgaat gcgcgtgcgg ttccaaatgc
      601 atgagaagca ttaccaaatg tcatgccgcg tgcgatagaa gattggaagt tcgtcatacg
      661 tacaagggat gcgcctatca tacttcctaa caagcccgtt gcgatgataa agagaatcgt
      721 aactgtatcc tcgccaccga gctgatgtga cacttgaata ccgaccgctg ctgtaatcga
      781 acgggggagg agtgtcacaa tatcttcgcg tccatagccg agtaatttta aagaaaaata
      841 aattagggag aaatttaaaa ttaccgctgt gaatacactg acgaagattg ttttaaaata
      901 ctttacaatc ttatgccggt ttaaatacag tggaaaagcg agacacacga ctgtggaact
      961 caatagttga ttgatccatt gccctcccac catataactg tgatagtcga tattaaaaag
     1021 taataatatc gcaataacgc caagagatgt cactaaagcg gggttgagta ttggtgaatt
     1081 aaacttatga tatatttttt tggacaatat aaacatcacg accgttaata caatcatcgc
     1141 aatgccttgc aagatcatca tgatggattt tgtcctttcc ggaagatacg gcctgtcacc
     1201 attttttctg ccactaaacc agaactatat gccacgagca ccgtaccaac agcaactaat
     1261 gtaaaaaata taatgaagtt taagtttaat tctgagacga catccattaa ccctatcaca
     1321 gagggaacga agaaaaacac catcgtcgcc agtagaaaat tagcaccttc tttaatccat
     1381 tctactttaa caattttaaa ttgaagtaaa atgaaaaata aaagtaaccc aataatacta
     1441 ccagctaggg ggatgttgaa aaactgctgt atttgattac ctaacatcgt aatcccataa
     1501 atgatgcata attgcgttac agttttcaat agctgtttca cttttgccat ttcaatcatc
     1561 ctttcttcgt tcgaatgatt ctattgtaac gggtaatcaa ccattataaa aatattggtt
     1621 tttcatgtta atcattactt ttatctatgg aatggttttc atgcactgtc gttaacggta
     1681 attgaatgtt gagatagtct aaaaatgttt gtgtcgcatg gtttaaatag acatctttcc
     1741 gccaaatgac tcccatcgtc caatcaactg tactgtcatc aattgacaac acacgaattt
     1801 ctggattgcg actaataata cgcacaatgt tatctggcaa aatactgatg cccattttgg
     1861 ctgtaatcaa atgttcgata aattgccact gtgagatttt agaaacgata tgtggcacga
     1921 aaccagcttg tcgagtgagc gcgataattt tgtcgttgat ataaaagtct tcattaaaca
     1981 taataaaatc ttcatctttt aaatctttga acgtcacatt ttccttttgc gcaagtggat
     2041 gcgtgtgatg catgacgact tgaaattcac ctttgtacaa tggaaatgaa tcaaaaagct
     2101 tactatctac aggtaacgat gtcagcccga gatgaatatc attgttccgc acttggtttt
     2161 caatcgtctt cccaccattt tcatctaaat taaatacgac attgggatac tgttgatgaa
     2221 actgaccgag cacttggacg aggcgttcca tatccatcaa tgcagaaatg ccaatcgaaa
     2281 tatacccttt ctccaacccc agcagactac tgatttcatt cggcaaactt tcgtataact
     2341 ttaaaatttc aaccgcttta tggtaaaaca cttcccccac atctgtcagc aacaattggc
     2401 gacgtgtgcg atcaaacaac ggctcaccga tttcagactc taactcttta atcgccttac
     2461 taatcgtcgg ttgcgcaata tataatgtct cggctgcacg cgtcatccca ccttgacgga
     2521 caatctctat aaaatacttc atctgtttaa tatccaattg tcctcctccc ttctttctct
     2581 ttattatagc gtaatgcttc ttataaattg tagcgtgcat ggcgctctca tacaaatttt
     2641 gacacactta cattttaagg gtaatataat actaatttta catatttttt atcttataca
     2701 atggagatat gcttatgaca ttacctaaaa atgtgaagtt gcgtttactc atgttgttta
     2761 tccaaaatgc ctctgtgaat gccgtttttc cgtttatggc attattactt acacactatc
     2821 taggcggtaa aaaagctgga atgatgctta ttattgggat tttattaaag tttagcggtt
     2881 cgattatcgg gggttatttg agcgaccatt taccactcaa gaagaatgtc atcgcttgtt
     2941 tgacgttaat gagcgcattc cttttcttag gtatgggagc cgtattagcg cagttagagg
     3001 gggtgcagtc ctttcaatta ttatttgttg ttttcttggc ctgttatctt ctcaatgaac
     3061 ttttgactgc cttagccaag ccgatgtaca acgctttagc tttagatagt attgacgaga
     3121 cacaccgaca acgctatgcc cgcttcaaat attggatttc gaacacttcc actgcgctcg
     3181 gtatgctgat ggggggatta ttttacggct cgttcaaagt gagtttattt gtgttaattt
     3241 atatttgttt aactgtgaat gtgttgattc tctattttgg tgtacaagaa acacgacgca
     3301 caatcagcca tccatcagca cgtcgctttg tggcaatatt tcaacgttat caagtagcat
     3361 atcggaatcg tcctttcgtc ttattactca tcagtagtat gctcatatta agtgcggaaa
     3421 tgtcgctctc atcctatgtt gcagtgcgtt tagaacatca attcaaaacg attcagttgt
     3481 atgacttccc gattgatggc gtccgtatgt tttcaatcct attattaatc aacacgataa
     3541 cgattattag tttaagcttt gcgattttac attatttcaa acgcttcaaa gtcgcgacca
     3601 ttttaaatat cggcttcctc tttttcgcgg gaggctatac ggtcgtcatg agtaataacc
     3661 acgcactcgt cctcgttatc tttatgttga tggccacgat tggtgaaatt ttgttcacgc
     3721 cgactgtgga agcagaaaaa atacgtttta tccctgccga cacacgcggt gcccattccg
     3781 cattggatag ttgggtgcca attggtgcag aactcatatc acggctattt ttaattattg
     3841 gtaccctact cacgccgctg atgatgtcag gtttagtttt agcaacagtc ataacaggtt
     3901 ttctattatt actgtcaact gtcaaacgat acgaggcagt ttaaaaaagc atagttaaaa
     3961 ggattgagac atagcgtatt aagtctcaat cctttcacat atatttggcg ctgattaatg
     4021 attttaaaat agtcaaaaaa tgaggatgaa tggcattaaa aatttcaact acatcccttt
     4081 tcgtgtgatt tgtcgactga taaatacggc tattagtaag ccatgtacaa tgctcagtcc
     4141 tttaaaaata aatgaactaa atgaaacgaa aaaggcggtt aattcaattt ctagtattaa
     4201 aatcattaga aacactgcga gcgagattta ctatgatttt ggcaccgtgt gatgatgttc
     4261 gttcatccgg tctccttttt tcaactgata tgtctacata tcatacgtta tcattgtatg
     4321 ttgttgcttg caatgatttc cactgtactt cttgctgata ccatgtgatg acttgatcaa
     4381 ttcgcgcaat caatgtcgcc tcatcttctc cttcgaccac aactgacatg atatgatcca
     4441 cactcaattg cgctgctcca aatggttggc ctggtgttgc tttaagagat tgaaaaagta
     4501 cccaatcttc ctctaacgga tgttgtatcc cttgaaatgt cgcattttga gggggcaaca
     4561 agatgaaccc gccataccgc tgaatttgta tgtgcgcctc gacctcttct gcacgtcctg
     4621 tttgtaagta aagactcatt tgattgagct gcatcccaat agcatgttct agcgtacgac
     4681 cgatttcacc accccctgta cgactcgcaa tttcacaaaa atagatgtcg ttcgtcggcg
     4741 tcacgaaaaa ttctgcatga aatgatccgc tcggcaaggt cggtaatgcc gcaacgactt
     4801 gctccacttg ctgttgtagc gcttgactga gtggattatc tgccttcaac atataactcg
     4861 ctagtggctg atggtcttta aaggctaaac atccattgta atagtgcgac acataggcac
     4921 acttcacttc tgcattatga acaagtccat cgacatgata catctcccca tcaataaact
     4981 gttcaatttc atatcttccg atgtcgggat gcgtctgtaa aaacgtgtca atatcctgtt
     5041 gtgcacgtgc aatcacaaca tccgacgaac ctgatccatc tatcggttta agtacgacag
     5101 ggtagccata ttttcctaca aatcgttgta tattcgcgct gtctatcgct ttatcaaagt
     5161 gtggtgtttt cactgatgtg ctttgtaaca actgtttcat gagcacttta tcccgatacg
     5221 cttctgcact gattaacgac tgaccttcta ttttcaacaa cgctctaatt ttggctgctc
     5281 ttatcacgtc aaattccgaa atcgatagga cgtggctaat gtcatattgt tgactcaatt
     5341 cgagcgcacg catttcaatg tcggggttta ccgtataatg ttcaaatgct tcaatacgca
     5401 aataatcttc gtccgcataa ctgtcttttt tctcagccgg acaaaataaa atcatttgct
     5461 ctgctgtatc cggaaaccat tcattatacg gtgttttagc atggtccgta cttgataaca
     5521 tcagtattgt cattccacaa tcacctcaat tacttcatga atccaatcaa ttttttgctg
     5581 caccgcttca gtcgactcag cttcaaaaac gatattgagc acaaaacaac tcgaaaagtg
     5641 ttcaggaggt aaaatcaccg aatctccata atttttcaaa gacacaacat agtgcacacc
     5701 tggtatttca actaagcggt caagcccttg aatcccttta aatatcccag cttgctcggc
     5761 catgacgcta taaaaacaca ttttctttga cgtttgatca aaagtaggcc aattttcagt
     5821 cacatcgtta ccgactgcaa catctaatat tttttcaatg aatgaatggc cagatgcacc
     5881 tggaattaaa tgtgacgcaa tgaagccacc tcctggtctg gccgctgatt caatcacttt
     5941 aaaaccatct tttgttactc taccttccag atgaaaagca caatggtcaa tgcctaaact
     6001 ttgaatagct tgcgtcgctt tcgtcttaat ttcttgttgt aaggccgcat ttttatcaga
     6061 tgggaaaatc gcaatgtact ccagtgaata ttcaggtgtg accgctttgt ccgtaatccc
     6121 tgcaatacgt acttctccat tttgcacgac accttcaacc gatacttctt caccgacaag
     6181 atacccttca taaatataat cattcggata ataatgatac actttgtcac gttctggtga
     6241 tgtcgcatgg cgtaatgttt cgtacacata ttcaatacat tcttcacttt caattttaaa
     6301 aatgccttta cttccagaag cgcccaccgg cttcaatatc ccaggcgttc caatacgcgc
     6361 aacagcatga cgtaaatcta cttcactacg cacattttca tagtcgggcg aaatgtcagg
     6421 gacttggtca aacgccatac gcattaaata tttattgcgg gcatttttaa catacgacac
     6481 tggaatgccc ggtaattgca gacggtcatt taattgtgca acgagctcta catctttatc
     6541 agaccacgtc aatatcccgc ttaaatggtg ctgttgatga tacgcgatta ccgcttcgac
     6601 gactgctgtt tcgtcatacg tatcgatttc aatcacttca tctaaaccac tgtcaatcag
     6661 ttgtggatca tgatctgtca ttaatacgac acgataccct tgtctttttg cctcaatgac
     6721 cggcgcgatt cgctcgactt tatgacttct caaattaata aatagtaatg ttttcacgca
     6781 cttcacgctc ctatgttaaa cctctataaa ttgctgttga taccatttac gatcatatgc
     6841 tgccatatca agttgactct gatgttcacg acaataatca aaccatgctt gataaagtgc
     6901 accgacaacc cttctgtaat aaagcgcttt cattaagtct atttcagaat acactacgcc
     6961 agatgttttc atcaaccgta aatcgtaata ggcgtttaac gtatacggtg gacattgaat
     7021 cgccccagga caacgaatgg catgttttac atttgcaaat acatgccctt tatgatgttg
     7081 attgctccat tcggtaatgt cactcatcac tggcggaaaa tagtaatgtc gctgaatacg
     7141 atggcgctca tacaaaaaat ttcccggcgt ataatgccaa ctattgtatt ccattcgttt
     7201 actaattgct gtcaaaatac ctaccaactt ctgactttga ttgcgaaaag cttgtttcat
     7261 cgcttcactc ggtatcgcac agcaaaaata catttgttgt ttccattcaa aaattgtttc
     7321 tagctgatga tgttttaatg catcataata catccatgga tatctaaacc ctcgcgtcat
     7381 accaacatct gaatgcgtcg cccgtatcgc atagcccacc actttttcga gtaaagtttg
     7441 aattgtggtc atatccggat gttgcgcaat atcgtttaaa aatgcgtcat aatacgtctg
     7501 ttctgaagcc atccctaaaa tttgcgctaa ttcattctcc atcgcttcat cacgatacag
     7561 tcccacttct tgttgattta aaaactgttc ttgcttatgc aaattgagcc cattaatttt
     7621 tcgataaatg acatagtttt cggcaacttt ttcacgtaat tgacaaatca accgtgattt
     7681 cgctaaaaga gattttggta caggtttgga cggtgtatca gtcatttctt gataaacggc
     7741 taacttttct tctaaatagt gggataaata atgcagtgaa aaatgaacac cattcacctc
     7801 ttctcctctg gcaggcggac cagattgcaa caatgtatag aggttaaaaa taacaatgcg
     7861 ttcatctttc gtccacgtgt ccttattttt ctcagccaac tcatccaata aaaagtgcgt
     7921 cgtatcccct tctaaacttt tcaataaatt gttgtaatga taaaacgtcg tatacgtatg
     7981 gctgttgtaa tagaggagca ccggtgccat aaaatcgact ttttctttaa tcgcatcaat
     8041 cacttctata acctcttgcg gttcgaggcg ctgaaaaaat ggaacaactt ctgattgata
     8101 gcgcaacatt tcctccgtat gcaaacgtgt cgtcaattgt tcaatttcag tcattgcttc
     8161 tgtcgtcaat gtgacataac cccaaatttg cgtatagtca tcattaaaac ttggtcctag
     8221 atgaagacga ccataggctg acattccaaa actgatgaca tgctctgaat ctgacggttt
     8281 ttcatcagta aacagacaag tgccatgcgc caaatgttga tatatcgccc attgttcaaa
     8341 attcaaactt tgtcgtgcaa tctcaagtgg aatcttacca tccaatgtca acatcgtgtc
     8401 aatcactgct aacggttgat caagctgtgt cacctttgca tgcgtttctt ccaacaactg
     8461 ttcaaaacct ttttgcttca ttacaattcc ttctctctgt ctaatataat gggtaacgaa
     8521 aaaggctgct gccccactgt gattgctgac gtgggacaat tttcaactgc atcatctaaa
     8581 tttcctaagt cacattcggg tatttgcgcc gtgccactat tacaatctaa acacatgtac
     8641 gctatccctt gcgcatcata tcgaaacaat cggggcgccg cagcaccaca agctgaacaa
     8701 gcaatacaca tgtctctgtc tacatacgca taatagctca tcaactccct cccttcacca
     8761 ctttaataca aaacaagaac aatataatat atcacttcta ttatttttat attatatcca
     8821 caaagtaatt ttgagtcaat gtagcatgtc ttctcatccc ataaatccta aaaacccctt
     8881 caagcaacga atggctgaag gggttaaagt tataatgata taatttgttg aagctattta
     8941 ttattatttc acgatgagca cagggatgtt cacacgcttt gcaattttat gtgtcacgtg
     9001 accgagtaca tgtttaatat ccatttctga acgtttatta ctcatcacga caatatcata
     9061 atgttcattt ccaacttcat tgacgatttc ttttgtcggt gagcctgtcg caaatttcac
     9121 tttgtaagat aagccaacat cttcaatcgt tttcaagaat ggcttcattt cttttttctt
     9181 ttcttctacc acttcttcaa aatgtttacc ttgatagcga acataattcg ctaattctgt
     9241 ctctgaaatg acattaaaaa cgacaatttc gtatggtgca tcattgcctg ttagcttttt
     9301 taattgttca gggacatttt taaagctgtt gccaaaatca tatggaacga gaatattgct
     9361 aaacatatct aatccctcct catttttggt gtctccttta ttctcatgtc gacatgacta
     9421 tatcggagac ggctttctca tcacctttat tttagcacta tgataacgct ttctcaaggc
     9481 gccctacttt gttaatggtg cacatgcata aaattatttt tttacacaaa cacgctactc
     9541 tcggtatctt cgacatgcat ttcaacttct agaaagtgca tccctctaca atgtcccctc
     9601 tgtaacataa aaaatgattc tacactaaaa aagacacttc tcaaaaaaat gaagtgtcta
     9661 aaaatttatg atgaaaattc tataatatct agtgtttcag taatgtcagc atcatttaaa
     9721 tcgtgcccta ccacgaccaa ataaggtgac atttcaattg gacacggttt caactctaaa
     9781 tgtccgggcg tatattgtac gacatagggt gtttcacaac ctttaaaata gacaaagccc
     9841 ttaactctaa agacatcttt taaccctttt aatccttcaa ttaacgcact ttgttggatg
     9901 ggcgattgaa attcatacaa catatgtgac aaatgcccgt gatgatggac ggatgaacgt
     9961 tcactcatat catatttcga cgcatgttga atctcttgta atgtaatttc accgtaacgt
    10021 gtaagtatgt acggtatatc aggatagcgt tgttgtatag tttggacaac ggctaacaac
    10081 tggtcacttt ctagcaaatc aattttatta ataatcaaat gactacagta gcgaatttgt
    10141 tcatccatta acgtttgaat cgtttctggt aaagtatctc gactttcata ggctgccgca
    10201 tcgacaatac ctaacacact caaatcttga atgaatggcg caagcacagg cgtcatgcat
    10261 gcatcaaaca cttcaactgg atgtgcggca ccactgcatt cgataaagac aatgtcaggt
    10321 tgatgtgtta aatacaattc gtggagttgt tgtgagacat tcgctttcaa atcacagcaa
    10381 atacaaccat tcgtcaacac ttccattttc acatcttcag tcacgagctg tgcatcgaca
    10441 tttttagccc caaagtcatt catcatcaca gctggtttta actcttgatc aatcgcatct
    10501 tgtattaaaa agttcagtgt agacgtttta ccgccaccta agaagcccgc taatatgacg
    10561 atatccatct aatctcctcc atctttcatc caatcacgaa ataaccggct tcccgttgtg
    10621 gtatgttggc cttgatattt cccttgatat tttgtttctg gtaccgtttt tgtttcagct
    10681 aatacgattt ggcaaatacg ttggccttgt tcaatttcta acggaaagtc gttggcattg
    10741 taaagttcca atgtaatttt accttcaaaa cctggatcga cccaacctgc attttgtatg
    10801 aaaagtcctg ctcgaccgac tgaactccgc ccttcaataa acccagttaa ttgttggggt
    10861 aacgtgatat attcttctgt cgtagctaaa ataaaagcgt gcgcaggtat caccactcga
    10921 ggttgttcaa tcgtctcata cgcaatcgga tcactcatcc gttgcacccc tgtttcgggt
    10981 ggtatcggtt ttaaaaagtg cgatcctaat gttaaatcaa cagatgctgg ctcaatatgt
    11041 gcttctacta atggttcaat attcaataat tgacgttcga gatacgcctt aatatcacta
    11101 tctgacaaaa tcatacgatg cacctcagtt tcttaaatat aaatcatcat ttttacgtag
    11161 cgtgatgttt tcataattta tcatgtccag aagattcgga caagattttt ttgaatattt
    11221 ttcattttat tttcgagtaa tgttatcaaa atacaataaa taagcaatgt tatataatcg
    11281 taaaaatctt ttgacaacgc aaccagatga gatgttcata cccgttgcgc atatttcata
    11341 aacgcacgat gaaacaatac gaaaaagcct gctcgagtgt catgacgata cattcgaaca
    11401 agcttcattt ctatttacat agctaatggc gttaatatta tgtcaaagcc actttagaat
    11461 aagaaataac gttgggtcat cggtaattct gttgccgctt cactcgttac ttttttccca
    11521 tccacgaaaa cttcatatgt ttctggatca acgtcaagtt ttggtaaagc actattattt
    11581 ttcatatctt ttttagttaa ttggcgaatg tttcgtacag gtctcacgtc acgttttaag
    11641 tctaatgtac gacgaatacc gttcatataa gccgcttgtg atacgaaagt gatggccgta
    11701 ctttgtaagt taccaccata ttgaccgtac atgtgacgat acttaatcgg ttcagatgtt
    11761 gggatagaac catttgcatc accatttgcc gccacgttaa tcatgccacc tttaacaacc
    11821 atgtccggct tcacaccaaa gaaacgtgga tcccaaatga caaggtccgc taattttccg
    11881 gcatcaacag aaccgacata ttcggatatg ccgtgtgtaa tggcagggtt aatcgtatat
    11941 ttcgcaatat aacgacggat acggttatta tcatcatatt cactgtcgcc ttcaagtggt
    12001 ccgcgttgtt gtttcatacg atgtgcgact tgccatgcac gcgtaatgac ttcaccgaca
    12061 cgtcccatcg cttgagagtc agagctgatc atactaaaga cacccatatc ttgtaaaacg
    12121 tcttctgcag caattgtttc tttacgaata cgagaatccg cgaaagccac gtcttctgga
    12181 atcgatgcat ttaaatggtg tgtaatcatg accatgtcta gatgttcatc aatcgtatta
    12241 tgtgtatacg gcaatgttgg gttcgtcgat gatggtaaca cgttcggata acccgctgat
    12301 ttaattaagt caggtgcgtg tccaccacca gccccttctg tatggtacat atggatcact
    12361 ttatcaccaa tcgctttcat cgtatcttcc ataaagcccg cttcgttcaa agtatccgcg
    12421 tgcagtgcga tttgaatatc atagtcatct gccacttcaa gtgcatgacg taatgctgaa
    12481 ggcgtcgcac cccaatcttc gtgcactttc aaaccgatga cccctgcatg aatttgttct
    12541 actaatgcag tcgggttcac cgcttgacct ttacctgtaa aaccaatgtt aagcggtaaa
    12601 ttttctgcag cttgaagcat gcggtgaata taccaagaac ctggtgtcac cgttgtcgct
    12661 tttgagcctt ctgaagcacc agttcccccg ccgatatgtg ttgtaatgcc actttctaat
    12721 gcaacttcag cttgttcagg gttaataaag tgtacatgtg tatcaatacc gcccgcagta
    12781 acaatcatcc cctctgctgc aatcacatct gtcgaggaac caataataat atcgacacca
    12841 tccataatat ccgggttgcc ggctttccct aatttcatga tgtaaccatt tttcacaccg
    12901 atatcacact taatgacttt atcgtaatca attacgacag catttgaaat aactaggtct
    12961 gccacggctt tgttatcacg tgttgcattc ggattttgtc ccataccatc acggattgat
    13021 ttaccaccac cgaaagtaac ctcatcacca tatcttgcgt aatctttttc gactttcgca
    13081 aataaatccg tgtcagctaa acgaatagaa tcgccgactg ttgggccgta caaactagta
    13141 tactgtgatt ctgtcatttt aaaactcatt tgacttcact tccctcagtc atattaggcg
    13201 ctgtgatgcg agattgatca agtggcccat cgactaagcc gtgaaaacca tacacatgtt
    13261 gtttaccggc ataacgtaca agacgaattt ctttttcgtc accaggttcg aatctaacag
    13321 ctgcacccgc tggaatgtct aaatgttttc catacgcttc ttcacgttca aacgacagcg
    13381 cgggattcgc ttcaaaaaaa tgataatgtg aaccgacttg aacaggtcga tcccctgtat
    13441 ttttaacctt taattttgta ttttcgcgtc cttcattaat cataatttcg gttgaattca
    13501 caataatttc tccaggtttc atcattatcc cctcctacac aattggatga tgaatcgtaa
    13561 ttaattttgt accatctggg aaagtggctt cgatttcgat atctgtcacc atcgcttcga
    13621 caccttccat gacatcatct tttgataaaa tttcacgccc gtaactcatt aactcagcaa
    13681 ctgttttacc atcacgcgca ccttctaata tttcataact aattaatgcg actgcttcag
    13741 ggtgatttaa tttcaagcca cgcgctttac gtcgtcgggc taaatccgca gcaacaacaa
    13801 tcatcagttt gtcttgttct cgttgtgtaa agtgcatccc attcactcct tattctcata
    13861 attaagttgt cttagacctt aattatagtc ctccctatcc gtactttcaa atcataatac
    13921 tatacgataa taataaaagc gcttcccaaa gaaatgtgtg attcaaattc
//
LOCUS       DANHPA010000069        13967 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.069, whole genome shotgun sequence.
ACCESSION   DANHPA010000069 DANHPA010000000
VERSION     DANHPA010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 13967)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13967)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13967
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.069"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            239..1249
                     /locus_tag="PTC28_001628"
     CDS             239..1249
                     /locus_tag="PTC28_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HDK5716911.1"
                     /translation="MAQTKKRDAFFDNARAILIFLVVFGHLIQPYTDAHPTVYALYLL
                     IYSFHMPAFLFISGYFAKNVGRAGYIEKVGKKLLGPYLIFFAFFSIYYFITGKNSSLD
                     LDPFDPVFALWFLLTLFFFNVIIVIVRQFKPIYVLPIAILIAVLAGYSTDVNGYLSWS
                     RTLVFFPIFYIGYIMDGGFSRYIRLRRFMPVSVMVLVSFFIFYTVHPIDSDWLLASSP
                     YKNIEGTEFLFSPLKRLSLYIIILGTMCAFLNLVPRTHHAFTYIGSRTMYVYLLHGIF
                     IGFIRGHQIYPFIEQPWLGLFYNFLLACFIVWIWSSSFVAKWTNPVVHLQRPSAFKPY
                     DQ"
     gene            1364..2524
                     /locus_tag="PTC28_001629"
     CDS             1364..2524
                     /locus_tag="PTC28_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDK5716912.1"
                     /translation="MKLQLNTYAQFLKAPSIRQFSSKINEMDDVINLTIGQPDFQMPD
                     VVKQAYQDAIANDYTTYSHNKGRRDTREAVAHYYQSRFNVHFDPEEIIITNGASEALD
                     TALRCIINPGDEILLPGPVYAGYIPLIQTLGGVPVFIDTRETGFKVTPEAIQQHMTPR
                     SRAILLNYPSNPTGAILTAEEVTAIVDVLKTHPLFVISDEIYAENTFGHTHTSFAQFD
                     EIRDQLLLINGLSKSHSATGIRIGFLSGPQYLIDKLTFMHAYNCICANVPAQMATIAA
                     LREAVDAPHVMNQAYVERRDYLVNALQSMGFRLDGVPQGAFYIFPNIEAFADDDFAFC
                     VDVLENAGVAMVPGSAFTDFGKGYVRISYAYEMTQLQEGMARLRQYLEARYN"
     gene            complement(2713..3531)
                     /gene="menB"
                     /locus_tag="PTC28_001630"
     CDS             complement(2713..3531)
                     /gene="menB"
                     /locus_tag="PTC28_001630"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015899909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HDK5716913.1"
                     /translation="MERQWETLKEYKEIKYEFFEGIAKVTINRPEVHNAFTPNTVQEM
                     IDAFTRARDDERVGVIVLTGEGDKAFCSGGDQKVRGHGGYVGDDQIPRLNVLDLQRLI
                     RIIPKPVIAMVKGYAIGGGNVLQVVCDLTIAADNAKFGQTGPKVGSFDAGYGSGYLAR
                     IVGHKKAREIWYLCRQYDAQQALDMGMANTVVPLADIEDETVQWCKEIMRHSPTALRF
                     LKAAMNADTDGLAGLQQFAGDATLLYYTTDEAKEGRDAFKEKREPDFDQFPKFP"
     gene            complement(3548..4339)
                     /gene="menH"
                     /locus_tag="PTC28_001631"
     CDS             complement(3548..4339)
                     /gene="menH"
                     /locus_tag="PTC28_001631"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HDK5716914.1"
                     /translation="MLHYNWYTAQSETNKMIVLLHGFISDQRTFSSHIEPLTQAAHVL
                     CVDLPGHGQDQSPEEVVWDFEWICTQLHAVLAQFKGYTLYLHGYSMGARVALAYALQY
                     QDALAGVVLESGSPGIEDDEARLERQQVDAARARVLEIASIEVFVNDWEKLPLFQTQR
                     FLTETTHQHIRELRLAQQPKRLAKALRDYGTGHMPNLWPQLASLKLPVQLIVGEWDEK
                     FMHIAERMSDALSEAQLTVVSQVGHTVNVEDGDKFDTILLEFIKG"
     gene            complement(4326..5996)
                     /gene="menD"
                     /locus_tag="PTC28_001632"
     CDS             complement(4326..5996)
                     /gene="menD"
                     /locus_tag="PTC28_001632"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HDK5716915.1"
                     /translation="MTNQRFLTEQVFHFVSELYAYGLREVVISPGSRSTPLALAFECH
                     PYIQTWIHPDERSAAFFALGLIKGSQRPVAILCTSGTAAANYVPAIAESHISRLPLIV
                     LTSDRPHELRGVGAPQAINQVNMFQNYVRFQFDLPIADGTPNTLAVNKYQLQKASQFF
                     DGPHQGPVHFNLPFREPLTPDLSRQDLLTSLHYERPHYQKTMDFSAILPVLKQSKGLI
                     VVGDMQHQDISQILTFATIYDLPILADPLNGIRATQHPNVVTTYDLLLRSGLNLSADF
                     VIRVGKPVVSKKLNQWLKTTDATQILVQNNADIDAFPKNPDYFFEMSANDFFRALGDI
                     PAAYRKMWLRQWQSMEEQARHTIKAHQKTANDEAAYVSRVLDKLGADDVLFVSNSMPI
                     RDIDNLYIDHQARIYANRGANGIDGVVSTALGMAVHQKVTLLIGDIAFYHDMNGLLMS
                     KLNDIHMNIVLLNNDGGGIFSYLPQKEGAPEHFERLFGTPTGLNFEHAALLYDFNYKR
                     FQDLQSFEYSHLTTMTPTLFEVVTQREANYEAHQNLYQKLSEVVNVTL"
     gene            complement(5989..7347)
                     /locus_tag="PTC28_001633"
     CDS             complement(5989..7347)
                     /locus_tag="PTC28_001633"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase"
                     /protein_id="HDK5716916.1"
                     /translation="MSVDVCEQAIIDAVQQTKQRWVSVEVKLEQQLDPITLFDMSKED
                     AGDRFYFRLNDNETSFFGYRVAAKIKNDFTNKRSIFKEWEKFKDDIALIHPDSERHHL
                     RICGGFQFSTKRMGDEWRRFGVNHFILPEVLISQVNQETFLTYTVQKEAFSIEQFYEL
                     VEKLNHLPRVVVQNTTPPQIKRIEDIYKDEWEALVEETTAKLAHDEKVVLSRRRMVQF
                     DADIEIGAVLYRALKNEKNSYLFVLESEDDIFISQTPEQLFKVTNGMLSTKAVAGTIP
                     RTHNEAQDQARINALLKNEKNLIEHGIVVESILEDIRPFIQYADYNREPQVLKNDHLY
                     HLYTEIGGPLAHKSYIELIDDLHPTPALGGYPKARALEYIEVHEFGARGLYGAPVGMI
                     DMYDDCEFIVAIRSMLMNHQQALLFAGAGIVKDSDAAEEVAETALKFKPMMVALGVSE
                     HD"
     gene            7521..8459
                     /locus_tag="PTC28_001634"
     CDS             7521..8459
                     /locus_tag="PTC28_001634"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HDK5716917.1"
                     /translation="MTSQFEKHSTFHKYWQLMRPHTLTASVVPVLVGTATAKLFLLGS
                     EDHLHFGLFLAMLFACLLIQAATNMFNEYYDFKKGLDDHESVGIGGAIVRNGMTPQHV
                     LKLAIIFYIIAAILGLYLAIQSSFWLIPVGLLCMAIGYLYTGGPFPISWTPFGELFSG
                     VFMGMIIIVIAFYIQTGHLQNYAFWISIPIVITIGLINMSNNIRDRVKDSQSGRRTLP
                     ILLGKRGSLIFLATFYAIAYLFVIYTALFKDGGSLFYLLVLLSFPLPVKVYRRFQKND
                     TPQSMMPAMAASGKTNTLFGLLYALGIYISALLGGV"
     gene            complement(8775..9539)
                     /gene="fetB"
                     /locus_tag="PTC28_001635"
     CDS             complement(8775..9539)
                     /gene="fetB"
                     /locus_tag="PTC28_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron export ABC transporter permease subunit
                     FetB"
                     /protein_id="HDK5716918.1"
                     /translation="MMSTTSLLLTSLLLLIPILVSFKERLHIAKDLIIAAIRAVIQLV
                     IIGYLLEFVFKLETTWIVLLLILVIMVNAAANTQKRKPEVVQHAFWISLAGILTGSIL
                     SLGGVLLTGAIDFKPNEIIPVAGMVGSNGMIAINLSYQNLNRIFTKETAVIEAKLSLG
                     ASPAMAAKEAIRESVKVAIVPTIDSVKTYGLVSIPGMMTGMIIAGVPPIQAIKFQLMV
                     VFIHTTATIISALVATYLTYRQFFNARHQLVQASQN"
     gene            complement(9536..10186)
                     /locus_tag="PTC28_001636"
     CDS             complement(9536..10186)
                     /locus_tag="PTC28_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDK5716919.1"
                     /translation="MLELTNVSYESGERKILYNISCHIDKGEAVAIVGPSGSGKSTLL
                     RLIADLMSPTSGNIEFKGQPYAHYSPEILRQHISYLPQSVELFGETIQDNLAFPAKVR
                     QVSFNKSKAKKLLEKVGLKKYKLSDKVQHMSGGEKQRITIARQLMFTPDILMLDEATS
                     ALDDKSSRQIEELVFDLVQEGMSVLWITHNDAQSQRQFHRKMEIRNGMLTREARLS"
     gene            complement(10179..10754)
                     /locus_tag="PTC28_001637"
     CDS             complement(10179..10754)
                     /locus_tag="PTC28_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDK5716920.1"
                     /translation="MIRTATPKDARAIAELTYLVWQDMELEIVRRYEKETVIAALVKS
                     ATEVYYRNHIEHVDIYEVAGQVAGILIAYPGQYEAAYEQAWQNLTLAEKIQLETDTPL
                     PVLEAERGDVYIETIATFPEFRGRGIATKLIQARLQSNPEVTWGLNCDEQNERAYQLY
                     CKLGFQEKMKKVLYGHEYRYMIYQNEGNAYA"
     gene            10893..11303
                     /locus_tag="PTC28_001638"
     CDS             10893..11303
                     /locus_tag="PTC28_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YolD-like family protein"
                     /protein_id="HDK5716921.1"
                     /translation="MHDHTLPTAYQSETDYRKIPRQYLNTRIPRGRGIVKWAPFATLP
                     EQFEAIKQFEANQLKIDRPDLSEDQINELNQMLHLKIAHNAFSKIHYWRAGHIHTIQG
                     YIASIDTLTNELVLTNERRTDRLVIGLNELYAIE"
     gene            complement(11450..12052)
                     /locus_tag="PTC28_001639"
     CDS             complement(11450..12052)
                     /locus_tag="PTC28_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HDK5716922.1"
                     /translation="MKKINKPLLWFILSFIAFHIILMLLWGEHGVYWQLYTGIMLIAG
                     ISYVFYQRDFASKRLLTSIAIGLATGVALVLIQVIFSWITSELTYASLIKQLSRTGVY
                     FKWQILVTLLFVMPCHELYMRTILQKGIVRMTSKPWLAIIIGALASGSFFIYLDQWWI
                     VTFIFVCQLLLGFSYMYTRRIITTTVAQIVAVVILLIFHG"
     gene            complement(12059..12244)
                     /locus_tag="PTC28_001640"
     CDS             complement(12059..12244)
                     /locus_tag="PTC28_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015899900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2187 family protein"
                     /protein_id="HDK5716923.1"
                     /translation="MTIAEVGDIVEFYDGIRGKVEKINDNSVIVDLTIMENFSELDLP
                     EKTVINHKRYKIIEQKG"
     gene            12432..13424
                     /locus_tag="PTC28_001641"
     CDS             12432..13424
                     /locus_tag="PTC28_001641"
                     /EC_number="6.3.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase"
                     /protein_id="HDK5716924.1"
                     /translation="MKFINNQNHTDPTLNLAMEEYVLKTVPMDDDDSYFLFYINRPSI
                     IVGKNQNTIEEVHQPYIETHAIDVVRRISGGGAVYHDFGNLNFSFITKDDGDSFHNFK
                     KFTQPIVEVLNDLGVKAELTGRNDIQVGQAKISGNAMVKVKDRMFSHGTLMLNSDLDE
                     VQNALRVNPAKIQSKGVKSVRKRVANIQEFIDEPLDIETFKAIILKKLFGEAEVESYT
                     LTEEDWKNIEKLSNEKYRTWDWNYGKNPKYNFEREHKFEKGFVQIKLDVKKGRIAHAK
                     IFGDFFGEGDVAELENALTDILHQRAAIQEALKDYDLYHYFGDIPRDDLIDMMV"
     gene            complement(13646..13864)
                     /locus_tag="PTC28_001642"
     CDS             complement(13646..13864)
                     /locus_tag="PTC28_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017464422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IDEAL domain-containing protein"
                     /protein_id="HDK5716925.1"
                     /translation="MKNQTDVKKQMVADPVRTINQLGVELVIAHALKNQRKQKLQHLI
                     DEALVNKNEQAFLKYTDEYLELEAVNGE"
BASE COUNT         4177 a         2883 c         2433 g         4474 t
ORIGIN      
        1 tgtatatcct cattattttt tcttatgatg atgacgcgaa atattataag aacgtttgtg
       61 ctacttttaa cgatgatttt gagtcccctc aattattata agcgaaattt catctttctc
      121 aacactatgc ctttaatatt cttgcaaatc attgcgttta atattcattt tcgttgcatt
      181 atgaaaagga tttataataa tctaatgttg atatttaaaa aaggagacac accgtattat
      241 ggcacaaact aaaaagagag atgcattttt tgataatgcg cgtgcaatct taatatttct
      301 tgttgtgttt ggacatttaa tacaacctta tactgatgca catcccacag tatatgcact
      361 ttatttactc atttatagct ttcacatgcc agcttttcta tttatttcgg gttactttgc
      421 taaaaatgtc ggacgtgcgg gttatatcga aaaagtcggt aaaaagttgt taggccccta
      481 cttaatcttt ttcgcatttt tctcgattta ttactttatt actggtaaaa atagttcact
      541 agacttagat ccatttgacc cagtatttgc actttggttt ttattaacac tctttttctt
      601 caatgtcatt attgtcattg tgcgtcaatt caaaccgatt tacgtgcttc cgattgcgat
      661 cttaattgca gtattggcgg gttattccac tgatgtcaac gggtatctga gctggtcacg
      721 aacactggtc tttttcccta ttttctacat cggttacatt atggatggtg gatttagccg
      781 ttatatccga ttaagacgtt ttatgccagt atcggtgatg gtgttagtga gcttctttat
      841 tttttatacg gtacacccta tcgattcgga ctggttactc gcaagctcac cttataaaaa
      901 tattgaaggc actgaatttt tatttagccc attaaaaaga ttgagcttgt acatcattat
      961 tttagggacg atgtgtgcct ttcttaattt agtacctaga acgcatcatg catttacgta
     1021 tattggctca cgcacaatgt atgtatactt acttcacggt atttttatcg gcttcattcg
     1081 tggccatcaa atctatccat ttattgaaca gccttggtta ggattgtttt ataacttcct
     1141 actcgcatgt tttatcgttt ggatatggtc gagtagcttt gtggcgaaat ggacgaatcc
     1201 tgtcgttcat ttacaacgac cttccgcatt taaaccttat gaccaataaa caatgaagtt
     1261 aacatgagaa tacatcgcct atagtcatca ctttacatta gattttggct atacggtcgt
     1321 gttattctaa atgttaactt ctcttttttt aggacgtgat aggatgaaat tacaactcaa
     1381 tacatacgca caatttttaa aagcacctag tatccgccag ttttcaagta aaatcaatga
     1441 aatggacgat gtgatcaatc tgacaattgg acaacctgat tttcagatgc ctgatgtcgt
     1501 taaacaagca tatcaagatg caattgcgaa tgattataca acttattctc acaacaaagg
     1561 ccgtcgtgac acacgtgaag ctgttgcaca ttattatcaa tctcgcttca atgtgcattt
     1621 tgatccggaa gaaatcatta ttacgaatgg tgcttctgaa gcattggaca cggcactccg
     1681 ttgtattatt aatccaggag acgaaatttt attacctgga cctgtttatg cgggctatat
     1741 tccattaatt caaacgttag gtggcgtacc tgtatttatt gatacacggg agacaggttt
     1801 taaagtgacc cctgaagcga ttcaacaaca tatgacaccg cgttcacgtg cgatattact
     1861 gaactaccct tccaatccaa ctggagcgat attgacggct gaagaagtga cagctattgt
     1921 cgacgtatta aagacacatc ctctatttgt gataagcgat gaaatttatg ccgagaacac
     1981 tttcggtcat acgcatacat ctttcgcgca atttgatgaa attcgtgatc aattattgtt
     2041 aatcaatggt ttaagtaaat ctcattcagc tacagggatt cgtattggtt ttctatcagg
     2101 tccacaatac ttaatcgaca agctgacatt tatgcatgcg tacaactgta tttgtgccaa
     2161 cgtacccgca caaatggcaa ctatagctgc attacgtgaa gccgttgatg cacctcatgt
     2221 gatgaatcaa gcttatgtcg aacgtcgaga ttacctcgtc aacgcattac aatcgatggg
     2281 ctttcgatta gacggcgtac cacagggggc attttacatt tttccaaata tcgaagcctt
     2341 tgccgacgat gactttgcgt tctgtgtcga tgtattagaa aatgcaggcg ttgcgatggt
     2401 accgggttcc gcatttactg atttcggtaa aggctacgtc cgcatctcct acgcttatga
     2461 aatgacgcaa ttgcaagaag gtatggcacg tttacgacag tatttggaag cgcgttataa
     2521 ttaacttaat acacgataag ggtagcggat gttgtaagat cactcaacaa caatatctgc
     2581 tactttttta gtgatcattt ttaatatcag tttttatgtt caaaaagata ttcaatgtca
     2641 aaacaaaaaa gcccattcta ctcactcaat gaataaaacg gacttttcat cttacatctt
     2701 taatttaaag acttatggga atttagggaa ctgatcaaag tcaggttcac gtttttcttt
     2761 aaacgcgtca cggccttctt tcgcttcatc agttgtgtag tataacaatg tcgcatcgcc
     2821 agcgaattgt tgtaaaccag ctaagccatc tgtatctgcg ttcatcgctg cttttaagaa
     2881 acgtaacgct gttggtgaat gacgcatgat ttctttacac cattgtactg tttcatcttc
     2941 aatgtccgca agtggtacaa ctgtgttcgc catacccata tccaacgctt gttgtgcatc
     3001 gtattgacgg cataaatacc atatttcacg tgctttttta tggccgacaa tgcgcgctaa
     3061 ataacctgaa ccgtaacctg cgtcaaatga acctacttta ggacctgtct gaccaaattt
     3121 ggcgttatca gccgcaattg ttaagtcaca tacgacttga aggacgttac cgccaccaat
     3181 ggcataccct tttaccattg cgataactgg ttttggaatg atacgaatta aacgttgtaa
     3241 gtctaacaca tttaaacgtg gaatttggtc atcaccgaca taaccgccat ggccacgtac
     3301 tttttgatct ccaccagaac agaacgcttt gtcgccttca cccgttaata caatgacacc
     3361 tacacgctcg tcatctcttg cacgtgtaaa tgcatcaatc atttcttgta ctgtattcgg
     3421 tgtgaacgca ttatgtactt cgggacgatt aattgttact ttcgcaatcc cttcaaaaaa
     3481 ttcatatttg atttctttat attcttttaa tgtttcccat tgtctttcca tggtggacct
     3541 cctcaagtta accttttata aactctaata gtattgtatc aaatttatcg ccatcttcca
     3601 catttactgt atggccgact tgcgatacga ctgtcaattg tgcctctgaa agcgcgtcag
     3661 acatacgttc agcaatatgc ataaactttt catcccattc ccctacgatg agttgcacag
     3721 gcaatttcaa acttgctaat tgtggccata agttcggcat atgtcctgta ccataatcac
     3781 gcaatgcttt cgctaatcgc ttcggttgtt gtgcaagtct cagctcgcga atatgttggt
     3841 gtgttgtctc cgttaaaaag cgttgtgtct ggaataatgg caatttttcc caatcattca
     3901 caaacacttc aatgctcgca atttcaagga cgcgcgcccg ggctgcatcc acttgttgac
     3961 gttcaagacg tgcttcatca tcttcaattc caggtgagcc actttctaac acgacacctg
     4021 ccaatgcatc ttgatattgc aatgcataag ctagcgcaac acgtgccccc attgaatagc
     4081 catgaaggta tagcgtgtag cctttgaact gtgccaacac agcatgtaat tgcgtacata
     4141 tccactcaaa atcccacaca acctcctctg gtgattgatc ttgaccgtgg ccaggcaaat
     4201 ccacacataa gacatgcgcc gcttgggtca atggctcaat atgagatgaa aatgtgcgtt
     4261 gatcactgat aaagccgtgt aagaggacaa tcattttgtt cgtttctgac tgtgctgtat
     4321 accagttata atgtaacatt cacaacttca ctcaatttct gatataaatt ttgatgtgct
     4381 tcgtaattgg cttcacgctg cgtcacgact tcaaataatg tcggtgtcat cgtcgtcaaa
     4441 tgactatatt cgaacgattg taagtcttgg aagcgtttat agttaaagtc atacaacaat
     4501 gctgcatgtt cgaagttcaa accagtcggc gtaccaaata accgttcaaa atgttccggt
     4561 gccccttctt tttgtggtaa ataagaaaaa atacccccac cgtcattgtt caataagacg
     4621 atgttcatat ggatatcgtt cagtttcgac attaatagcc cgttcatgtc atgataaaat
     4681 gcaatatcac ctataagtaa tgtcactttt tgatgtacag ccataccgag tgctgtagaa
     4741 acaacaccat caatgccgtt cgcccctcta ttggcataaa tgcgtgcttg atggtcaata
     4801 tataaattat cgatatcacg aatcggcata ctattgctga caaacaacac gtcgtcagcg
     4861 cctaatttat cgagtacacg actgacatac gccgcttcat cattcgccgt tttttgatgt
     4921 gctttaatcg tatgacgcgc ttgttcttcc atactttgcc attgtcgcag ccacattttt
     4981 cgataagcag cagggatatc tcctaatgct ctgaaaaagt cattggccga catttcaaaa
     5041 aagtaatctg gatttttcgg gaacgcatca atatctgcat tgttttgaac taaaatttgt
     5101 gtcgcatctg tcgttttcaa ccattgattt aactttttag agacgactgg tttaccgaca
     5161 cgaatgacaa aatcagccga caagttgagt cctgagcgca acaataaatc atacgtcgtg
     5221 acgacattcg gatgttgtgt cgcgcgaata ccattgagtg ggtcagccaa tatcggcaag
     5281 tcatatatcg tcgcgaaagt taaaatttgt gaaatatctt gatgctgcat gtcccctaca
     5341 acaatcagtc ctttagattg cttcaacact ggaagaatcg cactgaagtc catcgttttt
     5401 tgatagtgtg gacgttcata atgcaatgac gtcaacaaat cttgacgtga caaatccggt
     5461 gttaacggtt cacggaaagg taaattgaaa tgtactggac cttggtgagg gccatcgaaa
     5521 aactgactcg ccttttgtaa ttggtatttg ttcacagcca atgtattcgg cgtgccatct
     5581 gcaatcggta aatcaaattg gaaacgcaca tagttttgaa acatattgac ttgattgatt
     5641 gcttgtggcg cacctacacc tcttaattca tgcggtcgat cgcttgtcag tacaataagg
     5701 ggcaaacgac taatatgact ttcagcaata gcaggcacat aatttgcagc agctgtgcca
     5761 gatgtacaaa gaattgcaac cggacgttga cttcctttga ttaaacctaa cgcaaaaaaa
     5821 gccgcacttc tttcatcagg atggatccac gtttgaatat acggatgaca ttcaaacgcg
     5881 agtgctaaag gcgtggagcg tgaccccgga ctgatcacga cttcacgtaa tccatatgca
     5941 tataattctg atacaaaatg aaacacttgc tccgtcaaaa aacgttgatt agtcatgttc
     6001 actcacccct aaagctacca tcatcggttt gaattttaat gctgtttcag cgacttcttc
     6061 tgctgcatcc gaatctttca caatgcccgc acctgcaaac agtaacgctt gctgatgatt
     6121 cattaacatc gagcgaatgg ccacgataaa ttcacaatca tcatacatat cgatcatacc
     6181 gactggcgca ccataaaggc cacgtgcacc aaattcatgc acttcaatat attctaatgc
     6241 acgtgctttc ggatacccgc ctaaagcagg tgttggatgt aaatcatcta tcagctcaat
     6301 atatgattta tgcgctaatg ggcctccaat ctcagtatat aaatgatata aatggtcatt
     6361 tttcaatact tgtggctcac gattgtaatc ggcatactga ataaacggac gaatatcttc
     6421 aagaatactt tcaacaacga taccatgttc aattaagttc ttttcatttt ttaacaacgc
     6481 attgatacgc gcctgatctt gggcttcgtt gtgtgttctt ggaattgttc ccgcaacagc
     6541 tttcgttgat aacatgccat ttgtaacctt aaataattgc tcgggcgttt gagaaataaa
     6601 aatatcatct tctgactcta acacgaataa ataactattt ttttcatttt taagtgcacg
     6661 atataacacg gctccgattt caatatccgc atcaaattgc accatgcgac gacgagagag
     6721 cacaaccttt tcatcatgcg ctaattttgc tgtcgtttcc tcgactaatg cttcccactc
     6781 atctttatat atatcttcaa tccgcttaat ctgtggcggt gttgtatttt gcacgaccac
     6841 acgcggtaaa tgatttaact tttcaactaa ttcataaaat tgctcaatcg aaaacgcttc
     6901 tttttgcaca gtatatgtta agaacgtttc ttgattgact tgcgatatta agacttcagg
     6961 taaaataaaa tgattcacac caaagcgacg ccattcatcc cccatccgct tagtagaaaa
     7021 ttgaaatcca ccgcaaatac gtaaatgatg gcgttcagaa tcgggatgga ttaatgcgat
     7081 atcatcttta aatttttccc attctttaaa aatagaacgt ttatttgtaa aatcattttt
     7141 tatttttgct gcaacacggt atccaaaaaa agaagtttcg ttatcattta accgaaaata
     7201 aaaacggtcc cctgcatctt ctttcgacat atcgaacaac gtaatcggat ctaattgttg
     7261 ttctaatttg acttcaactg agacccatcg ttgttttgtt tgttgtaccg cgtcgatgat
     7321 tgcctgttcg cagacatcaa cactcatccc atactcactt ctttcatcat aatcaagttt
     7381 tatccattat tacattttaa catttttaaa ggcgattgtg tgcacaagtg tcttttccat
     7441 aatattgtta ttgatttcat tgacgaactt ttttataata tcaatgtaat ataaatatta
     7501 taaaaaagag gttgactaac atgacgtctc aatttgaaaa acattcaacg tttcacaaat
     7561 attggcaact catgcgtcct catacattaa cagcatctgt tgttcctgtt ttagtcggaa
     7621 cagcgactgc aaaacttttt ttattaggta gcgaggacca tctccatttc ggtttattct
     7681 tagcaatgtt gttcgcttgt ttgttaattc aagccgcaac gaatatgttc aatgaatact
     7741 acgacttcaa aaaagggtta gatgaccatg aatcagtagg tattggtggc gccatcgtac
     7801 gtaacgggat gacaccccaa catgtattaa aacttgcaat tattttttat atcattgcag
     7861 caatacttgg gctttactta gcgattcaaa gttcattttg gcttattcct gttggtttat
     7921 tatgtatggc tattggttac ctctatacag gcggtccatt cccaatctca tggacaccat
     7981 ttggcgaatt attctcaggt gttttcatgg gtatgattat tatcgtgatt gctttttaca
     8041 tccaaacagg tcaccttcaa aattatgcat tttggattag tattcctatt gtgattacaa
     8101 ttgggctcat caacatgtca aacaacattc gtgaccgagt taaagacagt caaagtggta
     8161 gacgtacttt acctatttta ttaggaaaac gtggctcact tatcttttta gcaacatttt
     8221 acgcgattgc ctaccttttt gtcatttaca ctgcactttt caaagatggt ggttcactgt
     8281 tctatttact tgtattactg agtttcccat taccagtgaa agtgtatcgt cgtttccaaa
     8341 agaatgatac accgcaatca atgatgccgg caatggctgc ttcaggtaaa acgaatacat
     8401 tattcggtct actatacgca ttaggtattt acattagtgc attgcttggt ggcgtataag
     8461 ttaaaacact cgatagaatc gaagtcttag aataacaaag gcttcgattc ttttttatag
     8521 ttttatatat atcgtaccac actattcgct cacaaatgaa aatgtattta cgaaatttta
     8581 atatatctct actttaccat ttttatcatt catgtcatcc tctatttgca tacgtaagat
     8641 taaagaaaca ccacgctttt gatatcttca cgcactttgt aaaaatcgga aagctcttct
     8701 gaatgtcacg catactgtac cataacagta tgcatttatc tcttaaacgt catgcctcaa
     8761 aaacgttata ttagctaatt ctgagacgct tgtactaatt gatggcgcgc attaaaaaat
     8821 tgtcgatagg tcaaatacgt cgcaaccaat gctgaaataa tcgtcgctgt agtatgaata
     8881 aatacgacca ttaactgaaa cttaatcgct tgtatcgggg gcacaccagc aataatcatg
     8941 cccgtcatca tacctggaat cgataccagg ccatacgtct tcacagaatc aatcgtcggc
     9001 acaatcgcga cttttacact ttctcttatc gcttcttttg ccgccatagc tggacttgca
     9061 cctaaagaaa gtttggcttc aatgaccgct gtctctttcg taaagatacg atttaaattt
     9121 tgataactta aattgatcgc aatcatgcca ttactaccga ccatccccgc aacaggaata
     9181 atttcattcg gcttaaaatc aatagcaccc gttaaaagca cgccacctaa agataaaatt
     9241 gagcctgtga gtatccctgc taaggatatc caaaacgcat gctgcacgac ttctggtttt
     9301 cgtttttgtg tattggcagc cgcgttaacc ataatgacta aaatgagtaa cagtacaatc
     9361 catgtcgttt ctaatttaaa aacaaattct agtaaataac caataatcac taattgaatc
     9421 actgcacgta tcgccgcaat gattaaatct ttagcaatat gtaatcgctc tttaaacgaa
     9481 actaaaatgg gaatgagtag caataatgat gtcaataata gcgaagtcgt actcatcatg
     9541 acaaacgcgc ctccctcgtt aacataccat tacgaatttc cattttgcgg tgaaattggc
     9601 gttgactttg tgcatcattg tgcgtaatcc acaaaacgga catgccctct tgaactaaat
     9661 caaacaccaa ttcttcaatt tgacgactgc tcttatcatc taacgcactc gtcgcttcat
     9721 caagcatcag tatatctggc gtaaacatga gctgacgtgc aatcgtgatt cgttgttttt
     9781 cacccccgga catatgttgc accttgtccg aaagtttgta tttttttaaa cctacttttt
     9841 ccaatagctt ctttgcttta gacttattaa acgaaacttg acgcaccttt gccggaaaag
     9901 ctaaattatc ttgaatcgtc tcaccaaaca attccacact ttgcggcaaa taactaatat
     9961 gctgtcttaa tatttcgggt gaatagtgtg cataaggttg tcctttaaat tcaatatttc
    10021 cactagttgg gctcattaaa tctgcaatca acctcaacag cgtactttta ccacttccag
    10081 acggcccgac aatagccacc gcttcacctt tgtcgatatg acaactgata ttgtataaaa
    10141 ttttgcgttc accgctttcg tagctgacat ttgttaactc aagcataagc gttaccctca
    10201 ttttggtaga tcatatagcg gtattcatgc ccataaagca cttttttcat tttttcttga
    10261 aatcccaact tacaatacaa ctgataggca cgttcatttt gctcatcaca gttcaagccc
    10321 catgtcactt ctggattcga ttggagccgt gcttgaatca attttgttgc aatacctcga
    10381 ccacgaaact cagggaaagt agcaatcgtt tcaatataga catctcctcg ctctgcctct
    10441 aatacaggta atggcgtgtc tgtttctaat tgaatctttt cggctaatgt taaattttgc
    10501 caagcctgtt cgtatgccgc ttcgtactgg cctggatacg caatcaagat acctgccact
    10561 tgtcctgcga cttcataaat atctacgtgt tcaatatgat tgcgataata aacttctgtg
    10621 gcgcttttaa caagtgctgc tatcacggtt tctttctcat aacgacgcac aatttcaagt
    10681 tccatatctt gccaaacgag gtatgttaac tctgcaatcg cacgcgcatc tttgggtgtt
    10741 gctgttctaa tcatatttga gtcacctcac tctttacatt ttagcctatt tatctgatgt
    10801 ttaaaaatac ctcaacattt gtacaaacaa atgttctaaa aatacttcac aaatcagaac
    10861 aagtgttcta taatcaggtt gaggtgattt ccatgcatga tcatacgctc cctacagcat
    10921 accaatctga aacagactat cgaaaaattc caagacaata tcttaacact cgaattccta
    10981 gagggcgcgg cattgtgaaa tgggcccctt tcgcaacatt gcccgaacag tttgaagcaa
    11041 ttaaacaatt cgaagccaat caacttaaaa ttgaccgtcc tgacttaagc gaagatcaaa
    11101 tcaatgaact gaatcaaatg ctgcatttaa aaatagcgca caatgctttt agtaaaattc
    11161 actattggcg cgctggacac atccatacta ttcaaggcta tatcgcgagt atcgatacat
    11221 tgacaaacga attagtgctc actaatgaac gacgcacaga tcgattagtc atcggattaa
    11281 acgaattgta tgcgattgaa tagtatcgcg tgattgactt tattttatct tataccctga
    11341 tttgaaaaaa gatgtcatca tttgattcaa aaagatgtat tggctatgct ttttatcaca
    11401 aaaaaacaca gcaaacattg cacgaataac aacatttact gtgtaaggtt taaccatgaa
    11461 aaatcaataa aatgacgacc gctacaattt gagcgactgt tgtggtgata attcggcgtg
    11521 tgtacatata actaaaaccg agtaacaatt ggcaaacaaa aatgaatgtc acaatccacc
    11581 attgatctaa atagataaaa aatgaacctg aagctaaagc accgattatt atagcgagcc
    11641 acggttttga agtcatacgc acgatgcctt tttgtaaaat ggtacgcata tataattcat
    11701 gacatggcat tacaaataat agcgtcacta aaatttgcca tttaaaataa acacctgttc
    11761 gtgataattg tttaattaac gaagcatacg tcagttctga agtgatccat gagaaaatga
    11821 cttgtatcag tacaagcgca acaccagtcg ctaaccctat ggcaatggat gttaataatc
    11881 gtttggaggc aaaatctctt tgataaaaga cataactaat gcctgcgatt aacataattc
    11941 ctgtatagag ttgccaatat acaccatgct caccccacaa caacattaaa ataatgtgga
    12001 aagcaataaa gctcagtata aaccaaagta gcggtttgtt gatctttttc atatacgttt
    12061 atcctttttg ttcaataatt ttatatctct tatgattaat cactgttttt tcaggcaaat
    12121 ctaactcgct gaaattttcc atgatcgtta aatcaacaat gacagagtta tcattgattt
    12181 tttcaacttt tcctcgtatc ccatcataga attctacgat atctcctact tctgcaattg
    12241 tcatctttct gtccccctta gaaacttact agcatatatt gtactaaaat ttacatttta
    12301 aataaacaat ttacgtcaat tgtcagaaat tatttacatt cagggtcttt ttaagataaa
    12361 tgattggaaa aatcgaatta aatcatgcat aacataagta agggcatatt tggggaaagg
    12421 agtgtttatg agtgaagttt attaataatc aaaaccatac tgatccaaca ttaaacttag
    12481 caatggaaga gtacgtatta aaaaccgtac ctatggatga cgacgatagt tattttctat
    12541 tttacattaa cagaccgtcc atcattgtgg gaaaaaacca aaatacgatt gaagaagtac
    12601 atcaacctta catcgaaaca catgcgattg atgtcgtacg ccgtatttct gggggtggcg
    12661 cagtgtatca tgatttcggt aatttaaatt tcagctttat cactaaagat gatggcgata
    12721 gttttcataa cttcaaaaaa ttcacacagc cgattgttga agtgctcaac gatttaggtg
    12781 taaaggctga actcacaggc cgcaatgaca ttcaagttgg tcaagctaaa atctctggta
    12841 atgcgatggt caaagtcaaa gaccgtatgt ttagtcatgg gacacttatg ttgaacagtg
    12901 atttagatga agtgcaaaat gcattgcgtg tcaatcctgc aaaaattcaa tcaaaaggcg
    12961 tcaaatctgt ccgcaaacgt gtcgctaaca ttcaagaatt tatagatgag ccgcttgata
    13021 ttgaaacatt caaagccatt atactcaaaa aattgttcgg tgaagcagaa gtcgaatctt
    13081 atactttgac agaggaagat tggaaaaata ttgaaaagtt aagcaacgaa aaatatcgca
    13141 cgtgggactg gaattacggt aaaaatccaa aatataactt tgaacgcgag cataaatttg
    13201 aaaagggttt tgttcaaatt aaacttgatg tcaaaaaagg tcgtattgcg catgctaaaa
    13261 ttttcgggga ctttttcggt gaaggtgatg tagctgaact tgaaaatgca ctgacagaca
    13321 ttttacacca aagagcagcc attcaagaag cgctcaaaga ttacgatctt tatcattatt
    13381 ttggcgacat tcctcgtgat gacctcattg acatgatggt ttaatacatg tagatcacac
    13441 tgttattaat catattgtat attaacttca tctgattccg agtcaaatgt ggcatatttc
    13501 acttctgtta aaagtgtaaa tattctctta ttggttgatt tctggatata agatggttaa
    13561 aaattgaaca tatcgacata aaaacaggac tacctcatac atgacggata gtcctgttta
    13621 atttgaagat gtggatgcac tttgactact caccgttgac tgcctccaac tctaaatatt
    13681 catcagtata ctttagaaat gcttgttcat ttttattaac caatgcttca tcaattaaat
    13741 gctgcaattt ttgcttcctt tgattcttca atgcatgtgc aatcacaagt tcaacgccca
    13801 gctgattaat cgtacgtacc gggtcagcaa ccatttgttt ctttacatca gtttgatttt
    13861 tcatgttgag tcactccttt gtgttaaatg catagtatta agttatttaa tagtataacg
    13921 aaacatgtcg caaaacgcaa cgaattttct gaatttttaa agtaatt
//
LOCUS       DANHPA010000070        13545 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.070, whole genome shotgun sequence.
ACCESSION   DANHPA010000070 DANHPA010000000
VERSION     DANHPA010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 13545)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13545)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13545
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.070"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            85..684
                     /locus_tag="PTC28_001643"
     CDS             85..684
                     /locus_tag="PTC28_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HDK5716926.1"
                     /translation="MAFELPKLPYSYDALEPHIDKETMEIHHSKHHNTYVTKLNAAVE
                     GTEFENKSLEDLIANLDSVPENLRTAVRNNGGGHLNHSIYWQILAPNSEEKGEVVDKI
                     KEQWGSLDEFKSEFADKAAGRFGSGWAWLVVNNGKLEIVTTANQDSPLTDGLTPILAL
                     DVWEHAYYLKFQNKRPDYISTFWNVVNWEKVDELYKAAK"
     gene            977..3016
                     /locus_tag="PTC28_001644"
     CDS             977..3016
                     /locus_tag="PTC28_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDK5716927.1"
                     /translation="MLKRLKEKTNDEKMRHHMNQRINFIFAIIIFAFVAIVLRLGYLQ
                     IAQGSQYNQMIRESENVTVNESVPRGRILDRNGNVIVDNASKKSITYTRGKNTNQQEI
                     LNTAKKLSKLIKMDTSKITERDKKDFWILKHPDKAKDLMKKEQQLYENGDISQEDYDQ
                     QLLTKISEQQLDSLSKKDLQVLAIYREMMQGSTLSPRTIKKDKVTDEEYASVSQKLAD
                     LPGINTEMDWDRKYPYGNTLRGILGSVSTPEEGLPKELTDDYLSKGYSRNDRVGKSYL
                     ELQYENVLRGKKKEMRYTTDKSGAIIDSEVVNEGSRGDDLVLTIDIKLQQKAESYLES
                     QIKKLRSEGAQDMDSAMMVVQDPNNGDILAMVGKKIAKDGTLTDYDIGTFTSQYAVGS
                     SVKGATLLAGYQNDVIHVGDKMVDEPLTFKDGLTKRSYFNKNGQKLIDDKEALMHSSN
                     VYMFKTALKLAGLEYQPHMSLPTDVTAPGQKLRKGLNQVGLGVKTGIDLPNEVSGQIE
                     RLKDNPGNYLDLAIGQYDTYSPLQLSQYVSTIANNGYRIQPHIGKEIHKATSDDELGP
                     VKHKINGHVLNRVNNTPDEIKEVQKGFDMAFNKPQGIGYASFNKTKVRAAGKTGTAEV
                     FQDGEPRVNSTYIGYAPVDDPQLAFSIVYTNQPVPEPWLNGGDLGRDVINYYFDK"
     gene            3285..4244
                     /locus_tag="PTC28_001645"
     CDS             3285..4244
                     /locus_tag="PTC28_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PstS family phosphate ABC transporter
                     substrate-binding protein"
                     /protein_id="HDK5716928.1"
                     /translation="MKRWQTLGGTLIGVSLVLGACGGASQQSSDQGDTKSSNVEGTVK
                     GNGSSTVAPIIEKLNEDFSSSHDKATVENVTSGTGDGFKQFIAGKTDFSNASRPIKDE
                     EKEQLKDKGIDYTEFKVARDGLTIAVNKDNDFLKEISLEDLKKIYSGEAKKWSDVDSD
                     YPDKPIKAFSPDQSHGTYDFFTEEVMDDVDIQAEKNQNTDVIVKSVQDNKEGIGFFAY
                     NFYKENENSLKAVKVKGDDGKAIGPNQKSIQDGSYPLSRPLFIYANNKKLKSNDVFAE
                     FMKFTLENKGKAAEAKGVDYVALPEKDYDAQLKKLEKITGESK"
     gene            4362..5288
                     /gene="pstC"
                     /locus_tag="PTC28_001646"
     CDS             4362..5288
                     /gene="pstC"
                     /locus_tag="PTC28_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HDK5716929.1"
                     /translation="MKSQNNIRALIQKKSHTGASLSAKIMPIILAIIATISILTTVGI
                     VITLLTETITFFTRVPLSHFLLETDWNPFSATPRYGIWALIIGTLKITLIATIFAVPV
                     GLGAAIYLSEYASKKTRKIIKPILEVLAGIPTIVYGFFALTLVTPVLRTIFPSIGSFN
                     AISPGLVVGVMIIPMIASMSEDAMSSVPQKIREGALGLGSTKLEMVFKVVIPAATSGI
                     MASIVLAISRAIGETMIVSLAAGSSPSFDLSFSHSIQTMTAYIVQVSQGDATNGSDLY
                     YSIYAVGFTLFMFTLVMNFISQWMTKRFREEY"
     gene            5291..6169
                     /gene="pstA"
                     /locus_tag="PTC28_001647"
     CDS             5291..6169
                     /gene="pstA"
                     /locus_tag="PTC28_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HDK5716930.1"
                     /translation="MNLVDQKHVEAQLSGRLTKNKVFKTIFFMCTLLGLIVLAILIID
                     ILRKGLPVMSTDFFTNFSSSSASSAGVKGALIGTLWLMMTLIPIALVLGVGSAIYLEE
                     YAKDNAFTKFIRVNISNLASVPSIVYGLLGATIFVALLQLGNSVIAAALTLALLILPV
                     IIVASQEAIRSVPQSVKEASYGLGANKWQTIQQVVLPATIPGIITGVILAISRAIGET
                     APLVAIGIPTILLRTPNSILDSFQTLPLQIYDWARKPGIDFQALSSAAIIVLLAILLI
                     LNTIAVIIRNKYSNKY"
     gene            6187..7029
                     /locus_tag="PTC28_001648"
     CDS             6187..7029
                     /locus_tag="PTC28_001648"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HDK5716931.1"
                     /translation="MTEIQTLERETKMVHQKQQIHTQLQSEQNHPIVYSTQNLDLWYG
                     EQHSLKNINLDIYEKNVTAIIGPSGSGKSTYVKALNRMVELVPFVKTSGKIFYREQNI
                     FDKRYPVEKLRTQVGMVFQQPNPFPKSIYDNITYGPRIHGIKDKKILDEIVEKSLKGA
                     AIWDELKDRLNQNAYSLSGGQQQRVCIARCLAIEPDVILMDEPTSALDPISTLKVEEL
                     IQDLKKDYSIIIVTHNMQQAARVSDKTAFFLNGYVNEYDDTDKIFSNPSDKQTEDYIS
                     GRFG"
     gene            7031..7681
                     /gene="phoU"
                     /locus_tag="PTC28_001649"
     CDS             7031..7681
                     /gene="phoU"
                     /locus_tag="PTC28_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HDK5716932.1"
                     /translation="MTVIRKRYEDQLNDLLKDLRALGLHTYSMLQKSIKVLSDEEITH
                     ARQIVKSDRKINQMEYDINEKVVMLITRQQPIAKDLRMMIATLKIASEFERIGDNAAN
                     IAKIRTRAQITDHYIMTRLETMGTLALLMLQDLYDATKNDDLDLVKEIIERDIDIDDL
                     YKQIINTSYLIDNDPFVAGQAHLVARYLERIGDHVVNIAEHLYYFITGDRYESYMN"
     gene            7753..7902
                     /gene="rpmG"
                     /locus_tag="PTC28_001650"
     CDS             7753..7902
                     /gene="rpmG"
                     /locus_tag="PTC28_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001265708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDK5716933.1"
                     /translation="MRVNVTLACTDCGDRNYITTKNKRTNPERIEMKKFCARENKQTL
                     HRETK"
     gene            8052..8591
                     /locus_tag="PTC28_001651"
     CDS             8052..8591
                     /locus_tag="PTC28_001651"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HDK5716934.1"
                     /translation="MTKKALRQATLRKMKMLQTEQKKAADRWLFEQLIQHPKYQQAKQ
                     LGLVLSMSHEVATDAIIRHAINEGKTVYVPTTDYEKKVMVFQQFTTFDQLATDDKGIR
                     YIQDDSPVQNDLDLVIVPGVVFNQDGYRIGYGGGYFDRYLSQYEPTNLSLIYDIQLNE
                     IVDIEPHDYPVSELIIAKT"
     gene            8610..10049
                     /locus_tag="PTC28_001652"
     CDS             8610..10049
                     /locus_tag="PTC28_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HDK5716935.1"
                     /translation="MFEEKHLWQTSFLWMRYLNYDCVHYEKDKNEVWLAHKKRQHVVI
                     FKQGTFTTQELDFDKDRIVEHQKQIAKFLGYDIKRYDVYVLTDKSFNTVNFNVHEPLQ
                     VQFHSIHNVKALRNTTTHPIIKRKLGQKDSKSLKEYQKRVLNQNIVEKAMYRFTPITY
                     AVVAINVLIWLIVTWFTPHHTDYEIINLGALAHFNVVHGEWYRLITSMFLHIEFQHLL
                     LNMLSLFIFGKLVEAFIGPLKMLGTYILSGIIGNLISLALITTSLSLGASGAIFGLMG
                     ALIALMIISRRFDQKVILQMVIAVVVMASLTLLIQNVNVVAHLGGLLGGVLVVYSGYF
                     FNQNRLYFYILLGISIVILTLICIKIFMTSDTNIYNQIIQREMHDEQYTEAKDMIKQT
                     YQNGYADDVTYYLTGIIIATQDSKAEAMAEWERGLKYFPNSPTLNFHMAIANRSLGDD
                     KQAKSYIQKAIKASPNNQEYQNLKKELDD"
     gene            10051..10254
                     /locus_tag="PTC28_001653"
     CDS             10051..10254
                     /locus_tag="PTC28_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgQ family protein"
                     /protein_id="HDK5716936.1"
                     /translation="MQTQLNTFYDVLQLLKKFGFIIYFDNKGDMLEMIEQEIQTLYRH
                     ELITRDEFVQSKLLINQRRMNKE"
     gene            10251..11237
                     /locus_tag="PTC28_001654"
     CDS             10251..11237
                     /locus_tag="PTC28_001654"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family glucokinase"
                     /protein_id="HDK5716937.1"
                     /translation="MNKQLILAADIGGTTCKLGIFDKSLTQLSKWSIETDISDPTGEV
                     LLKQIYDAFVHEMERNHYDMNEVVGMGIGVPGPVKFESGVVNGAVNLNWPQPVNVSEI
                     MQQFVSFPVYVDNDANVAALGEKHNGAGKDADDVVAITLGTGLGGGIIANGEIVHGHN
                     GSGAELGHFRVDHDQRFKCNCGKSGCIETVASATGVMNLVYFYYPKLTFKSSILPLIK
                     EHKVTAKAVFDAAKAGDQFCIFITERVAQYVAYLASIISVTTNPKYIILGGGMSDAGD
                     ILIENIKTEYYHLAFTPSQQGTEIVRAELGNDAGIVGAAGLIKTYIIEKERI"
     gene            11238..11549
                     /locus_tag="PTC28_001655"
     CDS             11238..11549
                     /locus_tag="PTC28_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MTH1187 family thiamine-binding protein"
                     /protein_id="HDK5716938.1"
                     /translation="MAIVDVVVIPVGTEGPSVSQYIAEIQTKLEEFKQEGKIDYQLTP
                     MNTLIEGELADLFEVIQAIHELPFNKGLDRVCTNIRIDDRRDKQRKMNDKLDSVKKHL
                     K"
     gene            11562..12191
                     /locus_tag="PTC28_001656"
     CDS             11562..12191
                     /locus_tag="PTC28_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDK5716939.1"
                     /translation="MNISNLTLGFVSTNTYFVENDTEMILIDPAGEIDKIDNKIKQSG
                     KQLIAILLTHAHFDHIAALDDVLTRYDVPVYMHAEEFSFLTDPQKNGSAKFKDYGLPI
                     ITSQAEPHALDEGTQQIGQFNIQTLHTPGHSPGSLTYVFDEFAVVGDTLFNNGIGRTD
                     LYQGNYETLVDSIKDKLFSLDEQLPLYPGHGPSTTVEDEYMNPFLDGQS"
     gene            12352..12861
                     /gene="tadA"
                     /locus_tag="PTC28_001657"
                     /pseudo
     CDS             12352..12861
                     /gene="tadA"
                     /locus_tag="PTC28_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165230.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly complex ATPase component
                     TadA"
     gene            complement(12949..>13545)
                     /locus_tag="PTC28_001658"
     CDS             complement(12949..>13545)
                     /locus_tag="PTC28_001658"
                     /inference="COORDINATES: protein motif:HMM:NF012798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDK5716940.1"
                     /translation="PKVKITLNLVKNICEVQALTGMRIGEVLALKNEDVDFKNKLIDI
                     NGSIYFKKINGIDYGTKTTVKTEGANRKITVNDRVLTIIRRLQLRNRQFENWETGYIN
                     RGFIFTNTRGNPTHLNPILRHLKTVKEKVFENQNRNLTTHTFRHTHISTLSEMELPLK
                     AIMERVGHVDERTTLRIYTHVTKTMRDRITTELEHFSF"
BASE COUNT         4631 a         2295 c         2549 g         4070 t
ORIGIN      
        1 caacttcctt taagcaaatt gattgattaa aggtacaaag ttgatacaat aaatatggaa
       61 tcaaatttag gaggatgatt aattatggct tttgaactac caaaattacc ttattcatat
      121 gatgcattag aaccacacat tgataaagaa actatggaaa tccatcatag caagcatcat
      181 aacacttatg taacaaaatt aaatgctgct gttgaaggta ctgaatttga aaataaatca
      241 ttagaagatt taatcgcaaa cttagacagc gtacctgaaa acttacgtac agcagttcgt
      301 aataatggtg gcggtcactt aaatcactct atttactggc aaatcttagc acctaactca
      361 gaagaaaaag gtgaagttgt agataaaatt aaagaacaat ggggttcttt agacgaattc
      421 aaaagcgaat ttgcagacaa agcagctggc cgtttcggtt caggttgggc ttggcttgtt
      481 gttaacaacg gtaaattaga aatcgttaca actgcaaacc aagatagtcc gttaactgat
      541 ggtttaacac caatcttagc gttagacgta tgggaacatg cgtactacct taaattccaa
      601 aacaaacgtc cagactacat tagcacattc tggaacgttg taaactggga aaaagttgac
      661 gaattataca aagctgcaaa ataatattta gcttttacaa ttcaaatgta aaattagtgt
      721 ttgaggctag gcaatgtgat attgcttagt ctctttttgg tttaaacgct cactgatcta
      781 aatatccctc gtcatgtctg ttgtgttgaa tatataacta gtagagaaaa atagccacat
      841 cattcacacg attgaacgcc attggattta aaaacatacg gtgaattttt tgtttgatcc
      901 atcacaaaat attagcaaaa acgatgtatt tcatatatca ttttaaagag aacgatgtga
      961 atagaggtcg gttgtattgt taaaacgatt aaaagaaaaa acaaatgacg agaagatgcg
     1021 tcatcatatg aaccaacgga taaactttat atttgcgatc atcatttttg cgtttgtcgc
     1081 gattgtatta agattaggtt atttacaaat cgctcaaggc tcacagtata atcaaatgat
     1141 tcgtgaaagt gagaatgtga ctgtgaatga atctgtgcca aggggacgta ttcttgatag
     1201 aaatggcaat gtgatagtag acaatgcatc aaaaaaatcc attacatata cacgcggtaa
     1261 aaataccaat caacaagaaa tactgaacac agcgaagaag ctttcaaaat taattaaaat
     1321 ggatacttct aaaattaccg aacgtgataa aaaggacttt tggattctaa aacatcctga
     1381 taaagcgaaa gatctaatga aaaaagagca acaactgtat gaaaatggcg atatttctca
     1441 agaagactat gaccagcagt tgcttacaaa aatttccgaa caacaactcg acagtctttc
     1501 taaaaaggac ttgcaagtat tagcaattta tcgagaaatg atgcaagggt ctacattaag
     1561 tccgagaaca attaaaaaag ataaggtcac tgatgaagag tatgcatcag tctctcaaaa
     1621 gttagcggat ttaccaggca ttaatacaga aatggactgg gatagaaagt atccgtacgg
     1681 caatacactt cgaggcattt taggaagtgt ttcgacacct gaagaaggtt taccgaaaga
     1741 actgacagac gattatcttt caaaaggcta ttcacgtaat gatcgtgtag gtaaaagtta
     1801 ccttgaatta caatatgaaa atgtgctgcg cggtaaaaag aaagagatgc gctatacaac
     1861 agataaatct ggcgcaatta ttgattcgga agttgtaaat gaaggttcac gtggggacga
     1921 tttagtgctc acgatagata ttaagcttca acaaaaagct gaatcatatt tagaatcaca
     1981 aattaagaaa ttgcgatctg aaggcgctca agacatggat tccgcaatga tggtcgttca
     2041 agatcctaat aatggtgata ttttagcgat ggtcggtaaa aaaattgcaa aagacggcac
     2101 cttaaccgac tatgacatcg ggacatttac ttctcaatat gcagtgggtt cttcagtcaa
     2161 aggagcgaca ttacttgcag gttaccaaaa tgatgtcatt cacgttggcg ataaaatggt
     2221 ggacgaacct ttgacattta aagatggatt aaccaaacgt tcatatttca ataaaaacgg
     2281 ccaaaaactg attgatgata aagaagcgct catgcattct tctaacgtat acatgtttaa
     2341 aacggccttg aaattagcag gactcgaata tcaaccgcat atgtcattac caacagatgt
     2401 gacggcaccg ggtcaaaaat tgcgcaaagg attaaaccaa gttggcctcg gtgtcaaaac
     2461 agggatcgac ttacctaatg aagtgagtgg tcaaattgaa cgtttaaaag acaatcctgg
     2521 taattatcta gatttagcaa ttggccaata tgacacttat tcaccgctac aactatcgca
     2581 atatgtatcg acaatcgcta ataacggtta ccgtattcaa ccacatatcg gtaaagaaat
     2641 tcataaagcg acaagtgatg acgaattggg accagttaaa cataaaatta atggccacgt
     2701 ccttaatcgt gttaataaca caccggatga aattaaagaa gtccaaaaag gtttcgacat
     2761 ggcatttaat aagccacaag gtatcggtta tgcgagcttt aataaaacaa aagtgcgtgc
     2821 agctggtaaa actggaacag ccgaagtatt ccaagatggg gaaccacgtg ttaattcaac
     2881 atatatcggt tacgcaccag tagatgaccc tcaattagcg ttctctatcg tctatacgaa
     2941 ccaacctgtg ccagaacctt ggctcaacgg tggggattta ggacgcgatg ttattaatta
     3001 ttattttgat aaataagtca cacattcata actgaaaagt gttagacagg gctagaacct
     3061 ccaaagcatt ctagccctgt tttttactgg ctttgaaaat acttcaactt ctacatgaca
     3121 ctccgtccaa aacaatcatc ttccacgaaa ctgaattcaa tacattaaaa tatatcgaac
     3181 aataaattaa cgcaaacttt acacttcatt cattcctaat taataaaaca tttgtatcct
     3241 taaatcgtaa gcaaatcgaa agttaattct aggaggatgt ttcaatgaaa agatggcaaa
     3301 cactgggcgg tacactgatt ggtgtctcat tagttttagg tgcatgtggt ggtgcatctc
     3361 aacaaagtag tgatcaaggt gatacgaaaa gttctaacgt tgaaggaaca gttaaaggga
     3421 acggttcgtc aacagtagcc ccaatcattg aaaaattgaa tgaggacttt tcttcaagtc
     3481 acgataaagc aacggtagaa aatgtgactt caggaacagg cgacggtttc aaacaattca
     3541 ttgcaggtaa aactgacttc tcaaatgcat cacgtcccat taaagatgaa gaaaaagaac
     3601 aattgaagga taaagggatt gattatacag aatttaaagt agctcgagat ggtttaacga
     3661 ttgcagtcaa caaagataac gactttctta aagagatatc actagaagat ctgaaaaaga
     3721 tttattctgg agaagctaaa aaatggtcag atgttgatag tgattatcct gacaaaccga
     3781 ttaaagcatt ctctccagac caatcccatg gtacatatga cttctttact gaagaagtga
     3841 tggatgacgt ggatattcaa gctgagaaaa atcaaaatac ggatgtcatt gtaaaatctg
     3901 ttcaagataa taaagaaggt atcggtttct tcgcatataa cttctataaa gaaaatgaga
     3961 atagcttaaa agcggttaaa gtaaaaggcg atgacggtaa agcgattggg ccaaatcaaa
     4021 aatcaattca agatggttca tatccattaa gcagaccatt attcatttat gcgaacaata
     4081 aaaaattaaa aagcaatgac gtttttgctg aatttatgaa gtttacatta gagaataaag
     4141 gtaaagcagc tgaagcaaaa ggtgtcgatt atgtagcatt acctgaaaaa gattatgatg
     4201 cgcaacttaa aaaattagaa aagattacgg gtgaaagtaa ataaaatctc acgtgctaac
     4261 tatactgatt aaacaattga attgtaaaca gtcttgttca gggttgagta ttgtcactat
     4321 aagataatgc ttcaaccctt tttagaaaag gagtcagtaa gatgaaatca caaaataata
     4381 ttagagcact cattcaaaaa aagagtcata caggcgcatc tctcagtgct aaaatcatgc
     4441 cgataatttt agctatcatt gctacgatat ccattttgac aacagttggg attgtgatca
     4501 cgttgctcac ggaaacaatc acttttttca cacgtgtgcc gttatcccat tttttacttg
     4561 aaacagattg gaatcctttt agtgccacgc ctcgatacgg catttgggca ttaatcatag
     4621 gtactttaaa aatcacttta atcgcaacaa tttttgcagt acctgttggt ttaggtgccg
     4681 caatttattt gagcgaatac gcatctaaaa aaacgcgtaa aatcattaaa ccgattttgg
     4741 aagttttggc gggtattcca acaattgttt acggtttttt tgcacttacg ttagtgacgc
     4801 ctgtactcag aacgattttt ccaagtatcg gcagttttaa cgccattagt ccaggtttgg
     4861 ttgtaggcgt catgatcatt ccaatgattg caagtatgag tgaagatgcc atgtcttcag
     4921 ttcctcaaaa aattcgtgaa ggtgcacttg gcctcggttc cacgaagcta gaaatggtat
     4981 tcaaagtggt catccctgca gcaacatctg gcattatggc ttctattgta ttagctattt
     5041 cacgagctat tggtgaaacg atgattgtgt cactcgcagc aggttcaagt ccatcatttg
     5101 atttgtcatt ctcacattca attcaaacga tgacagccta cattgttcaa gtttcacaag
     5161 gggatgcaac aaatggctct gacctttatt acagtattta tgcagttggg ttcacattat
     5221 ttatgttcac attagtgatg aactttattt cacaatggat gacgaaacgt ttcagagagg
     5281 agtattaatg atgaatttag tagatcaaaa acatgtcgaa gcgcaactct ctggccgttt
     5341 gactaaaaat aaagtattta aaaccatttt ctttatgtgt acattattag gactcatcgt
     5401 tttagccatt cttattattg atattttaag aaaagggcta ccagtcatga gcactgactt
     5461 ttttacaaac ttttcttcat catcagcaag ttcagctggg gtgaaagggg ctttaatcgg
     5521 aacgttatgg ctcatgatga ccttaattcc gattgcactc gttttaggag taggtagtgc
     5581 catttattta gaagaatatg caaaagacaa tgcatttact aaatttattc gtgttaatat
     5641 ttcaaactta gcttcggttc cttcaatcgt ttatggttta ttgggcgcaa cgatttttgt
     5701 ggcgttacta caattaggga attcggttat agccgctgca ttaacgctcg cattacttat
     5761 tttacctgtc attatcgtcg ctagccaaga agccattcgc tctgtaccgc aatcagtaaa
     5821 agaagcatct tatgggttag gtgcgaataa gtggcaaacg atacaacaag tcgtgttacc
     5881 cgcaacgatt cccggcatta ttactggtgt tattttagcc atttcacggg ctattggaga
     5941 aacagcacca ttagttgcga ttggcattcc aacgattcta ttacgcacgc caaacagtat
     6001 tttagattca tttcaaacct tacctttaca aatatatgat tgggcacgta aaccaggtat
     6061 tgatttccaa gcgttatcat cagctgctat tattgtatta ctcgccattc tacttatttt
     6121 aaatacaatt gcagtcatta ttcggaacaa atattctaac aagtattaat gaaatgaggg
     6181 ttagtcatga ccgaaattca aacattagaa agagaaacta aaatggttca tcaaaaacaa
     6241 caaattcata cacaacttca atcagaacaa aatcatccta tcgtatattc tactcaaaac
     6301 ttagatttat ggtatggaga acaacattct ttaaaaaata ttaacttaga catttacgaa
     6361 aagaatgtca ctgcgattat tgggccgtcc ggttctggta aatcaactta tgtgaaagca
     6421 ctgaatcgca tggtagaact tgtacctttt gtaaaaacgt caggcaaaat cttctatcga
     6481 gaacaaaata ttttcgataa acgttatccg gttgaaaagt tacggacaca agttggtatg
     6541 gtttttcaac agccgaatcc atttccaaaa tccatttatg acaacattac ttacgggccg
     6601 cgcattcacg gcattaaaga taaaaaaata ttagatgaaa ttgttgaaaa atcacttaaa
     6661 ggagcggcga tttgggatga attaaaagac cgtctgaacc aaaatgcata tagcctttct
     6721 ggtggacaac agcagcgtgt atgtattgcg cggtgtttag caattgagcc ggatgtcatt
     6781 ttaatggatg aaccgacatc agcccttgac cctatttcga cgttaaaagt ggaagaattg
     6841 attcaagatt taaagaaaga ttattccatc attattgtca cacacaatat gcaacaagcg
     6901 gcacgtgtat ctgacaaaac ggcctttttc ttaaatggtt acgtgaatga atacgatgat
     6961 acggataaga ttttttcaaa cccttctgat aagcaaacag aagattatat ttcaggacgt
     7021 tttggttaat atgacagtca ttagaaaacg ttatgaagac caactcaatg atttattaaa
     7081 agatttacgt gctttaggct tgcacacgta cagtatgctt caaaaatcca taaaagtctt
     7141 atctgatgaa gagattacac atgcacgaca aattgtgaaa agcgatagaa aaatcaatca
     7201 aatggaatat gatattaacg aaaaagttgt gatgctgatt actcgccaac aaccgattgc
     7261 gaaagattta agaatgatga ttgcaacact taaaatcgca tctgaatttg aacgtatagg
     7321 agataatgct gcaaatatcg ctaaaattag aacacgtgca caaattactg accactatat
     7381 tatgacacgg cttgaaacaa tgggtacctt ggcgttgttg atgttgcaag atttatatga
     7441 tgcgactaaa aacgatgatt tagatcttgt gaaagaaatt atagaacgag atattgacat
     7501 tgatgattta tataagcaaa ttattaatac gagttactta atcgataatg atccatttgt
     7561 tgcgggtcag gcgcatcttg ttgcacgata tttagaacgc attggtgatc acgttgtcaa
     7621 tattgccgaa catttatatt attttattac cggagatcgt tatgaatctt atatgaatta
     7681 acgcttccca attttcattt aaaatggtat gataataagg tcgtatttta atgatagatg
     7741 aggagggtta atatgcgcgt aaacgttact ttagcatgta cagactgtgg agatcgtaac
     7801 tacatcacta ctaaaaacaa acgtactaat cctgaacgta ttgaaatgaa aaaattctgt
     7861 gcacgtgaaa acaaacaaac attacaccgc gaaacaaaat aattgtttca atcttgggct
     7921 aggacattac gttctagcca ttttttatac tcttatttca aaacactgtg cgtaaattcg
     7981 agacgatctt tccatgacac aacgcccaat gcacgatata ataggttgag atgtgaggga
     8041 gtgaaaatga aatgactaag aaggcattgc gacaagcgac attacgaaaa atgaaaatgc
     8101 ttcaaactga acaaaagaaa gcagcagatc gttggttatt cgaacaactc attcagcatc
     8161 ctaaatatca acaggccaag caactcggcc tagtattgtc aatgtcacat gaagttgcga
     8221 ctgatgccat tattcggcat gcaatcaacg aaggcaaaac cgtttatgtg cctacaacag
     8281 attatgaaaa aaaagtaatg gtgtttcaac agttcacaac atttgatcag ttagcaacag
     8341 acgacaaggg gattcgctat attcaagatg atagtccggt gcaaaacgac ttagatttag
     8401 tcatagtgcc tggcgttgta ttcaatcaag acggttatcg tattggttat ggtggcggtt
     8461 attttgatcg ctatctatca caatatgagc ctaccaattt aagtctcatt tatgatatac
     8521 aactcaatga aatagtggac attgaacctc atgactatcc tgtgtcagaa cttattattg
     8581 caaagacata aaaagactgg aggtagcata tgtttgaaga aaaacattta tggcaaacga
     8641 gttttctttg gatgcgttat ttaaactatg actgtgttca ttacgaaaaa gataaaaatg
     8701 aagtttggct tgcgcataaa aaaaggcaac atgttgttat ttttaagcaa gggacattca
     8761 ctacgcaaga acttgatttc gataaagatc gtattgtaga acatcaaaaa cagattgcca
     8821 agtttttagg atatgatatt aaacgctatg atgtttatgt gttaacagat aaatctttta
     8881 acacagtgaa ctttaacgta catgaaccac ttcaagtgca attccatagt attcataatg
     8941 tcaaagcact tcgcaatacc acaacgcatc ccatcatcaa acgaaaatta ggtcaaaaag
     9001 attcaaaatc attaaaagag taccaaaagc gtgtccttaa ccaaaacatc gttgaaaaag
     9061 caatgtatcg ttttacaccg attacatatg cagttgttgc aatcaatgtg ttaatttggt
     9121 tgattgttac gtggtttaca ccacatcata ccgattatga aattataaat ttaggtgcat
     9181 tggctcattt taatgtggtc catggggaat ggtaccgact cattacatca atgtttttac
     9241 atattgaatt tcaacattta ttattaaaca tgttgtcact ctttatcttc ggcaaacttg
     9301 tggaagcatt tatcggtcct ctgaaaatgt tagggacgta tatattatca ggtattatcg
     9361 gcaacctgat ttcacttgct ttaatcacaa cgagtttatc attaggtgca agtggtgcga
     9421 ttttcggttt aatgggtgct ttaattgcgc tcatgattat tagtcgtcgc tttgatcaaa
     9481 aagtgatttt gcaaatggta atcgctgttg tggtcatggc gagcttaaca cttctgattc
     9541 aaaacgtgaa tgtcgttgcg catttagggg ggctacttgg cggtgtactc gtcgtttatt
     9601 caggttattt tttcaaccaa aaccgtcttt atttttatat tttactcggt atttcaatcg
     9661 tgatactaac actgatttgt attaaaatct ttatgacatc tgatacaaat atttataatc
     9721 aaattattca acgtgaaatg catgatgagc aatataccga agcgaaagat atgattaaac
     9781 aaacgtatca aaatggctat gcagatgatg tgacttatta cttaacaggt attattattg
     9841 ctacacagga ttctaaagct gaagcaatgg ctgaatggga gcggggtctg aaatatttcc
     9901 ccaactctcc aacgttaaat tttcatatgg ccattgcgaa tcgctcatta ggagatgata
     9961 aacaagccaa atcttatatc cagaaagcca ttaaagcaag cccaaacaat caagaatatc
    10021 agaatttgaa aaaagaactg gatgattaat atgcaaacgc aattgaatac gttttatgat
    10081 gtactccaac tattaaaaaa atttggcttt attatttatt tcgataacaa aggtgatatg
    10141 ctagaaatga ttgaacaaga aattcaaaca ttatatcgcc atgaattaat cactagagac
    10201 gaatttgtcc aatctaaatt attaattaat caaagaagga tgaataaaga atgaacaaac
    10261 aattaatttt agctgcagat attggtggca cgacatgtaa attaggtatt tttgataaat
    10321 ctttaacaca attatctaaa tggtctatag agacggatat ctcagatcca acaggtgaag
    10381 tattacttaa acaaatttat gatgcgtttg tgcatgaaat ggaacgcaac cactatgata
    10441 tgaatgaagt agtgggtatg ggtattggtg taccaggccc tgttaaattt gaatctggtg
    10501 ttgtaaatgg tgctgttaac ttgaattggc cacaacccgt taacgtctca gaaataatgc
    10561 aacaatttgt gtcattcccg gtgtatgttg ataatgatgc aaatgtggcc gctcttggtg
    10621 aaaaacataa tggtgccggt aaagatgcgg atgatgtcgt tgcaattacg ctagggactg
    10681 gtttaggtgg cggtattatc gctaatggtg aaattgttca cggtcataac ggctcaggtg
    10741 ctgaacttgg acatttccgt gtcgaccacg atcaacgttt caaatgtaat tgtggtaaat
    10801 caggctgtat tgaaacagta gcttctgcga caggtgtcat gaatttagtt tatttctact
    10861 atccgaagct cactttcaag tcttcaattt taccgctcat taaagaacac aaggtcacag
    10921 ctaaagcagt attcgatgca gctaaagcag gtgaccaatt ctgcattttc attacagaac
    10981 gtgtcgcaca atacgtcgca tatcttgcaa gcattatcag tgtcacaact aaccctaaat
    11041 acattatttt aggtggcggt atgtccgatg caggcgatat tttaattgag aatatcaaaa
    11101 cagaatatta ccatcttgca ttcacgcctt cacaacaagg cactgaaatt gtacgtgctg
    11161 agttaggtaa tgacgcaggt attgtggggg ctgcaggact cattaagaca tatatcattg
    11221 aaaaggagcg tatttaaatg gcgattgttg atgtagtagt catccctgtt ggcacagaag
    11281 gaccaagtgt cagccaatat attgcagaaa ttcaaacgaa actagaggaa tttaagcaag
    11341 aaggtaaaat cgactatcaa ctcacaccaa tgaatacatt aattgaagga gagctagccg
    11401 atttatttga agtcattcaa gctattcatg agttaccgtt caataaaggg ctcgatcgtg
    11461 tatgtacaaa cattcgtata gacgaccgtc gtgataaaca acgtaaaatg aacgataaac
    11521 tagattctgt caaaaaacat ttgaaataat gagggtgtca catgaatatt tctaatctta
    11581 ctttaggatt tgttagcaca aacacttact ttgtggaaaa tgatacagag atgattttga
    11641 ttgatccagc tggtgaaatt gataaaattg ataataaaat taaacagtct gggaaacaac
    11701 tgattgctat tttgttaaca catgctcatt ttgatcatat cgctgcatta gatgatgtgc
    11761 tgacacgata tgatgtacct gtttatatgc atgcggaaga attttcgttt ttaacggatc
    11821 cacaaaaaaa tggttctgca aaatttaaag attatggcct tcctattatt acgagtcaag
    11881 cagaaccaca cgcacttgat gaaggaacac agcaaattgg tcaatttaac attcaaactt
    11941 tgcatacacc aggacattca ccaggcagtt tgacttatgt gtttgatgaa tttgcagtag
    12001 tgggcgacac gttatttaat aatgggattg gacgtacaga tttatatcaa ggcaactatg
    12061 aaacattagt cgactctatt aaagataaat tatttagttt agacgagcaa ttaccgttat
    12121 atccaggtca tgggccttct acaacagttg aagatgaata tatgaatccg tttttagacg
    12181 gtcaaagtta aatcaaagag caggagaaaa tgtctatgaa aacttttctt ctgctctttt
    12241 tagatgtgta atgcagtcat actaaacgag cacaaaaatt taatgatttt ttaatagagt
    12301 aacaagtaat ttcctcgcct cttacgtgta tatatgcaag aggtgatttt tatgcaacta
    12361 ctattagatc atgtaataca atttgcactt caaaatgagg catcagacat tcattttatc
    12421 ccatcacaat cacaagtcga agtgaaactc agagtgaaag atcaacttgt attatatgac
    12481 acattaaatc tagaaacgta tcaaaaattg ttaactttgt tgaaatacca agctggatta
    12541 gatatttcga cacgccacaa agcgcaaagt gggcgctata tttatgaaca taaagcgtta
    12601 tattatttaa gagtgtccac gttaccttta aacttaggta ctgaaagttg tgttattcgt
    12661 attacacccc aatattttca aaatgcgaaa gctcatagtg tattagacat caaatctaat
    12721 atggagaaaa agcaaggttt aattctgttt agcgggccta caggtgcagg aaagagcacg
    12781 ttaatgtatc aaatggtcgt ctatgctaaa caaaagttaa acctgaatat tatcacaata
    12841 gaagacccgg tcgaacagtt ggacggtgaa atgtaaatgg cttaatagcg gcgtttgttg
    12901 actatatctt gaaaatcacg gaataattcg gggcaaaaaa agggcagatt aaaaagaaaa
    12961 gtgttcaagt tcagtcgtaa ttctatctct cattgtttta gttacatgtg tatatatcct
    13021 taatgttgta cgttcatcca catgtcctac acgctccatt atcgctttga gtggtaactc
    13081 catttctgac aatgtagaaa tatgggtatg tctaaaagta tgtgttgtta gatttctatt
    13141 ttgattttca aacacttttt ccttaactgt tttaagatgc cgtaaaatag gattcaagtg
    13201 tgtaggatta ccccttgtgt ttgtgaaaat aaaacctctg tttatatagc cagtctccca
    13261 attttcgaac tgcctgttac gtagttgcaa gcgcctaatg atagttaata ctctatcatt
    13321 tacagttatt tttctatttg ctccctcagt ttttactgtt gttttagttc cgtaatcaat
    13381 accattaatc tttttaaaat atattgatcc atttatatct ataagtttat ttttaaaatc
    13441 tacatcttca tttttaagtg ctaaaacttc accaatgcgc atacctgtaa gtgcttgcac
    13501 ttcacaaatg tttttcacta aattcagtgt gatttttact ttagg
//
LOCUS       DANHPA010000071        13381 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.071, whole genome shotgun sequence.
ACCESSION   DANHPA010000071 DANHPA010000000
VERSION     DANHPA010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 13381)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13381)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13381
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.071"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(293..1048)
                     /gene="nfsA"
                     /locus_tag="PTC28_001659"
     CDS             complement(293..1048)
                     /gene="nfsA"
                     /locus_tag="PTC28_001659"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011276836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-insensitive NADPH nitroreductase"
                     /protein_id="HDK5716941.1"
                     /translation="MSEYVYDLAKRHHSVRKFKQTPIDREIIKKLIEAGQMASTSSFL
                     QTTSFIGVESIEKKEALREVSGQPYVVENGYLLVYVIDYHRHQLVNEKSKADMAASFE
                     SAEGLLVGTVDAALAAQNIALTAEDMGYGIVYLGSLRNDVQRVREILNLPEHVFPLFG
                     MAIGEPADDENGSPKPRLPLSHVFHVDTYNQDDAQLSEQIEVYDQTVSQYYQERTQGK
                     RDETWSEQIAGFMSSKQRLEMNDWLQMSGFNKK"
     gene            1601..2170
                     /gene="ahpC"
                     /locus_tag="PTC28_001660"
     CDS             1601..2170
                     /gene="ahpC"
                     /locus_tag="PTC28_001660"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002445177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HDK5716942.1"
                     /translation="MSLIGKQIEEFSAQAYNAKTDEFIEVTHEDLKGNWNVVVFYPAD
                     FSFVCPTELEDVQNHYEKLQELGTNVFSVSTDTHFVHKAWHDHSDAISKLQYTMIGDP
                     SQAITRQFDVLDETSGLAQRGTFIIDPDGVVQAAEINADGIGRDASTLVHKIKAAQYV
                     RQNPGEVCPAKWEEGSETLTPGLDLVGKI"
     gene            2185..3708
                     /gene="ahpF"
                     /locus_tag="PTC28_001661"
     CDS             2185..3708
                     /gene="ahpF"
                     /locus_tag="PTC28_001661"
                     /EC_number="1.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit F"
                     /protein_id="HDK5716943.1"
                     /translation="MLNQELKQQLSQLLDLMEGDVVLKVSTGDDDHSQKMNDLVNEVS
                     DMSSRITVEKAELKRTPSFSINRPNEDTGITFAGVPLGHEFNSFVLALLQVSGRAPKE
                     EQSVIDQIKSIDEPLHFETFISLTCQKCPDVVQALNLMSVINPNITHTMIDGAVFKKE
                     AEDIMAVPAIFLNGEQFGNGRMTVTDILSELGQGPDASEFENKETFDVLVVGGGPASA
                     SSAIYAARKGLKTGIVADRIGGQVNDTADIENLIGVKKTTGPSLATSLEEHIKDYNVD
                     IMTGVRAEGLEKTDDIVHLTLDNGAVLKTRSLIIATGARWKKIGVPGEDTFANKGVAY
                     CPHCDGPLFEGKDVAVIGGGNSGVEAAIDLAGICKSVTVLEYGESLKADSVLQERLNS
                     LPNTTVITHAATQEIKGDDRVSGIAYTCNETNQEKHVDLNGVFVQIGLSPNTEWLGDT
                     VQRNRMGEIEVDRLGNTNIPGVFAAGDCTDQRYKQIIISMGSGATAALSAFDYLIRN"
     gene            complement(3909..4850)
                     /locus_tag="PTC28_001662"
     CDS             complement(3909..4850)
                     /locus_tag="PTC28_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1002 domain-containing protein"
                     /protein_id="HDK5716944.1"
                     /translation="MYKKLFISGVVTSMLMVGVAQAANEFKPKEEIFIQGADLNNNQL
                     VETKEKLGVGNNVTTYKVTNTDVIEYTGTEYDFIHSSALIKPKRFTSGVDVEIETPEN
                     ITRITREQYMNAAITSGIQDATIKIASVDQVTGEGALTGIYKAYATQGHRLNAQDIQN
                     ANQEMNHLARISENHQNKDGYSDEALNEAVAEMKAQIAEAKASHQQLNSTTINQIVNQ
                     TLTERGLYQILSDHEIAVIQNIMVNVAESNVVNQDPDAFKKQATELKEMIQSQAGDKL
                     KKLKDLDNEETRNFLQKLWDAIVSIFTKIWNWLISFL"
     gene            complement(4968..5957)
                     /gene="bioB"
                     /locus_tag="PTC28_001663"
     CDS             complement(4968..5957)
                     /gene="bioB"
                     /locus_tag="PTC28_001663"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HDK5716945.1"
                     /translation="MKIAKQILEGRALTPDEALDLLVNPSYDTMNLVHEAYQLRKHYY
                     GHKVKLNMILNAKSGICPEDCGYCGQSREMKQKQRYALISEDEITEGARVAAENEIGT
                     YCIVMSGRGPSDKEIDHITSSVERIKAAHPQLKVCACLGLTNETQAEKLKAAGVDRYN
                     HNLNTSENYHHEVVSTHTYEDRVNTIEMMKRNNISPCSGVICGMGESNQDIVDMAFAL
                     KEIDADSIPVNFLHPIKGTKFGEMDQLTPTRCLRILALFRLINPTKEIRIAGGREVNL
                     RSLQATALMVANSIFVGDYLITGGQPNQLDYDMIQDMGYDIDYGTSHESELFV"
     gene            6163..6540
                     /locus_tag="PTC28_001664"
     CDS             6163..6540
                     /locus_tag="PTC28_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HDK5716946.1"
                     /translation="MDTLDEFLQTIDKPEHREKLATVIQTILDRYPELTLEIKWNQPM
                     LLYKENSTFILGFSKAKPHFAVAPEKHTLDTFAKEIEKTGYQMTKMFMKIKWTDEVNY
                     TLLYDIIDFNIHDKKDSRFFWRQ"
     gene            6857..7882
                     /locus_tag="PTC28_001665"
     CDS             6857..7882
                     /locus_tag="PTC28_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HDK5716947.1"
                     /translation="MIEFKNVNKIFKQGRHSVHALKDISFSIQAGDVFGVIGYSGAGK
                     STLVRLINQLEQQTSGDVYVDGHHLNTYAPAQLRAVKKDIGMIFQQFNLLDSKTVFKN
                     VAMPLILRKVPMNEIKSRVEEMLHFVGLSGKANNFPNELSGGQKQRVAIARALVTRPK
                     ILLCDEATSALDPATTDSILQLLKKTNETLGVTIIVITHEMSVIQTICNRVAIMENGV
                     VIELDTVKQVFSHPKTTTAQRFVSTVINTSPSQKVMDNLQIDERHQIYRLFIESTQIT
                     QTLINDLIQKTAVNVNIVHATMADIQEETVGYLWLLIKGDAAQQQQVTSYFDHQQIQY
                     EKGVPTC"
     gene            7876..8535
                     /locus_tag="PTC28_001666"
     CDS             7876..8535
                     /locus_tag="PTC28_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5716948.1"
                     /translation="MLGSSIDSAQLLEALYQTLYMVTISLIFGALIGVPLGIVLVATR
                     QNGIWPNAWIHHILNPVINILRSVPFIILLIAIIPFTKLIVGTSIGTTAAIVPLTVYV
                     APYIARLVENSLLEVDEGIIEAAHAMGATPIQIIRYFLLPEALGSLILSLTTAIIGLI
                     GATAMAGAVGGGGIGDMALVYGYQRFDTLVIIITVVVLVIIVQCIQSIGNALAKKVRR
                     H"
     gene            8551..9390
                     /gene="gmpC"
                     /locus_tag="PTC28_001667"
     CDS             8551..9390
                     /gene="gmpC"
                     /locus_tag="PTC28_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016425688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter
                     glycylmethionine-binding lipoprotein"
                     /protein_id="HDK5716949.1"
                     /translation="MKKLITFLVLAVFVLSACGNNKSEKVTLGVASNDTKAWEKVKEL
                     AKKEDIDLEIKQFSDYNVPNTALNDGDIDMNAFQHFAFLEAFKKANKGTEITPIRTTV
                     LAPLGIYSEKIKDIKDVKDGAKVVIPNDVSNQARALKLLEKAGLLELNKDFGLSSSIK
                     DIKSNPKNLDIKAVDAQQTARALSDVDISVINNGVATKAGLDAKKDPIYLEASDSDAV
                     KPYINIIAVNSKDKDNKVYKRIAELYHSEEAKAALKEDTKDGELIIDLKQDEIKAIED
                     SLK"
     gene            complement(9548..10543)
                     /gene="add"
                     /locus_tag="PTC28_001668"
     CDS             complement(9548..10543)
                     /gene="add"
                     /locus_tag="PTC28_001668"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HDK5716950.1"
                     /translation="MNAELKGIPKLELHCHLDGSVSLEYLEKQSQQQGIPIQMDKVTV
                     DQHCQSLAEYLQSFDEILKVMQTRISLIDAVVDVAEQAVHDGVKYIEIRFAPAFHQGQ
                     GLEIDEILTAVCKGASLAEQTFGIKVRMLVCGMKHHSDEMNRAIFDSLRDDETLEAYI
                     VGVDLAGDEAASPTTEHEALIQYAQQQGLNITLHAGECGCAKNVYDAVRFGAQRIGHG
                     VAALQDDDVLATVKAKDVLLEFCPKSNLQTKAIESLDSLDLQRLLKENIAFLINTDNR
                     TVTQTNLLDEYALLLEHKLLNWEDIVRINFKAIDYTFANSSTKQWLKQQFEVEAH"
     gene            10938..12929
                     /locus_tag="PTC28_001669"
     CDS             10938..12929
                     /locus_tag="PTC28_001669"
                     /EC_number="1.11.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019469893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HDK5716951.1"
                     /translation="MDNKKLEQLKKDQKNNDGKAMTTNNGVKVSEDENTLTVGERGPS
                     LLEDFHFREKIMHFDHERIPERIVHARGFGAHGEFQVYKDLSAYTSADFLTHPEKTTP
                     VFVRFSTVQGSKGSPDTVRDVRGFATKFYTDEGIFDLVGNDIPVFFIQDAIKFPDLIH
                     AVKPEPHNEMPQGGSAHDTFWDFFAQNPESTHTAFWAMSDRGIPKNFRQMEGFGVHTF
                     RLVNREGQSYFVKFHWKPLHGLESLVWDEAQILSGKDIDFHRKDLYESIEKGDYPEWE
                     LGLQIIRPEQEFDFDFDILDPTKIWPEDQVPVEIVGKMTLNRNVSNVFDETEQAAFHP
                     GHIVPGIDFSNDPLLQGRLFSYTDTQISRLGGPNFNQIPINRPVNEVHNNQRDAMHQM
                     NVHQGQTAYHKNALNNNDPHTTPREEGGFEHYQEKVEGHKIRKRSSSFEDYYSQAKLY
                     LNSLTPAEYGHMVAGFSFEIGMCKSVMVKQNAVNQLNKVDRQLAEAVAANVGVSVPEE
                     NEEVQSTTKDSQLTMEKFDIPLPGHSVAVLVSGEISEETLKSYAKVFAENKLNYAFVG
                     KQPRAIDEDFGITETYDTAHPTLFDSAIVLSDGSDLLPEAEEFAEMTYKHKKPLVVNE
                     KAANQLGRSKIKLNAPGVFTSDEPNTIVKAFDRVRYWDR"
     gene            complement(13143..>13381)
                     /locus_tag="PTC28_001670"
     CDS             complement(13143..>13381)
                     /locus_tag="PTC28_001670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HDK5716952.1"
                     /translation="SGHASDKEYLNRLQKFHYQQRLITFLLAMQKLFMSMPEYCRDIW
                     NSTIEDIQVRANENSSIKLARIGVLDNDMSYLKI"
BASE COUNT         4205 a         2681 c         2387 g         4108 t
ORIGIN      
        1 gctggattat tttcatatga tacttttttt acttgcgcaa acctgttcct tttacttttt
       61 tggggggata agattgccaa aaaggtgaga ctcccgaggg atcagctgaa ccggaaaatc
      121 caccaacttt tctgcaagtg taacagtata atcaaagcgt tggttagttg aaggttcagc
      181 ccctaagaac gcgagtccaa gacggcaatc atatgcaaac agcatgttcg aataatgaaa
      241 aggcaagttc agcaaactta gctctgtcaa aataatatta gccctttcac ccctatttct
      301 tattaaatcc tgacatttgc aaccaatcat tcatttctaa tcgttgcttg ctactcataa
      361 agccagcaat ttgttcagac cacgtttcat cacgtttacc ttgtgtacgt tcttgataat
      421 attgagaaac cgtttgatca taaacttcaa tttgttcaga caattgagcg tcatcttgat
      481 tgtacgtatc cacatgaaag acatgcgata atggaaggcg cggtttaggt gaaccatttt
      541 cgtcatctgc cggctctcca atggccatac cgaataatgg gaagacgtgt tcaggtaaat
      601 ttaaaatttc gcgtacccgt tgcacatcgt tacgtaatga accgagatat acaatgccgt
      661 aacccatatc ttcagccgtt aatgcaatat tttgcgccgc taatgccgcg tcaactgtac
      721 cgactaataa cccttcagcc gattcaaagc tcgctgccat gtctgctttc gatttttcat
      781 taaccaactg gtggcgatgg taatcaatca cataaacgag caagtaccca ttttcaacga
      841 cataaggctg acctgagact tctctaagtg cctctttctt ttcaatagat tctaccccaa
      901 taaatgatgt cgtttgtaag aaacttgacg tcgatgccat ttgtcctgct tcgattaact
      961 ttttgattat ttctcgatca attggtgttt gcttaaattt tcgaactgaa tggtgacgtt
     1021 tcgccaaatc atacacatat tctgacataa aaacactcct aacatccttt tctctatcgt
     1081 aacacttgcc ctactaaaac gcatgattcg tgcatgcttc ctagctatca tactcgtact
     1141 ttattaaatt agcgaaaatc acatctgtta tgacaacatc aacaaagtgc tttctatatt
     1201 taccctttaa ttgagaatga aagcatataa atgatattca aatcttttat caattaactt
     1261 atttccattt ttatttccaa tacatcgtct gctttattaa ctttactaca atgagaaaat
     1321 aatgcgtatc aatcaccaaa cgtgagcgaa ttgtgatcaa aaagtggctt ttttactgta
     1381 tttatgcttt attgcaccta taacatcaaa accgctatta atgatgaaag cgttttactt
     1441 caaagtggat aaaaatcttt tgtatttatt tgacgtaatg attgttccat gtcataatac
     1501 tacttgagat tagaattatt attaataagg aattatcaca aagtaaaact tggttctaat
     1561 ccaaataata atgattcata taaataggag gattttgatt atgtcattaa tcggtaaaca
     1621 aattgaggaa ttttcagcac aagcatacaa tgcaaaaaca gatgaattta ttgaagttac
     1681 acacgaagat ttaaaaggta actggaatgt tgtcgtattc taccctgcag atttctcatt
     1741 cgtatgtcca actgaattag aagatgtaca aaatcattac gaaaaattac aagagttagg
     1801 tacaaacgta ttctctgttt ctacagatac tcactttgta cataaagcat ggcacgatca
     1861 ttcagatgcc atcagcaaat tacaatatac aatgattggt gatccttctc aagcgattac
     1921 acgtcaattc gatgtattag atgaaacgtc aggtcttgca caacgtggta ctttcattat
     1981 tgacccagac ggtgttgttc aagcagcaga aatcaatgca gacggtatcg gccgtgacgc
     2041 aagcacactc gtacacaaaa ttaaagcagc acaatatgtt cgtcaaaatc caggtgaagt
     2101 ttgcccagcg aaatgggaag aaggtagcga aactttaact ccaggattag atttagtagg
     2161 taaaatttaa ggaggctata ctgaatgtta aatcaagaat taaagcaaca actttcacaa
     2221 cttcttgatt tgatggaagg tgacgttgtt ctgaaagtga gcactggcga tgacgatcat
     2281 tctcaaaaaa tgaacgatct cgttaatgaa gtttcagaca tgtcatctcg aattacagta
     2341 gaaaaagctg aattaaagcg tacgcctagc tttagtatca acagaccaaa cgaggacact
     2401 ggcattacat ttgctggtgt ccctcttggt catgagttca attcttttgt ccttgcactc
     2461 ttacaagtga gtggtcgtgc accaaaagaa gagcaatctg taattgatca aatcaagtct
     2521 attgatgaac cccttcactt tgaaacattc attagcttaa catgtcaaaa atgtcctgat
     2581 gtcgttcaag cattaaactt aatgagtgtc atcaatccga atataacaca tacaatgatt
     2641 gatggtgccg ttttcaaaaa agaagcagaa gacattatgg cggtacctgc aattttctta
     2701 aatggtgaac aattcggtaa tggccgtatg acagtgacag acattcttag tgaattaggt
     2761 caaggtcctg acgcttctga atttgaaaat aaagaaacat ttgacgtcct cgtagtcggc
     2821 ggcggtcctg caagtgcaag ctctgccatc tatgctgcgc gtaaaggttt aaaaacaggt
     2881 atcgtagcag acagaattgg tggtcaagtt aatgacacag ctgatattga aaacttaatt
     2941 ggcgtgaaga aaacgacagg tccatcactt gcgacaagtc ttgaagaaca cattaaagac
     3001 tacaatgtag atattatgac cggcgtacgt gcagaaggat tagaaaaaac agatgatatc
     3061 gttcatttga ctttagataa tggcgcagtg cttaaaacgc gctcactcat tatcgcaaca
     3121 ggtgcacgtt ggaagaaaat cggtgtaccg ggtgaagaca cattcgcaaa caaaggtgtc
     3181 gcatactgcc cgcattgtga cggacctcta tttgaaggta aagacgtcgc tgttatcggt
     3241 ggcggtaact ctggtgttga agccgcgatt gacttagcag gtatttgtaa aagtgtgaca
     3301 gtccttgaat atggtgagtc attaaaagca gactctgtat tacaagagcg tttaaattca
     3361 ttaccaaata caacagtcat cacacatgca gcaacacaag aaatcaaagg tgacgaccgc
     3421 gtgagtggta ttgcttacac ttgtaacgaa acaaatcaag aaaaacatgt tgatttaaat
     3481 ggtgtcttcg ttcaaatcgg tctttctcct aatactgaat ggttaggcga tactgttcaa
     3541 cgtaaccgca tgggtgaaat tgaagtcgac cgtttaggaa acacgaacat tcctggtgtc
     3601 tttgcggcag gtgactgtac agaccaacgc tataaacaaa tcattatttc tatggggtca
     3661 ggcgcaacag cagcattatc tgcattcgac tacttgattc gtaactaaat aggattcata
     3721 tcattaatcg gactggtgag aaagggttat cttttcatca gtccgatttt ctattttatg
     3781 cacgtaaagg caacacagct ttttcatcca tcgaagtaag caagcgagag ccttttgagt
     3841 gcaatcataa aaggacaaac accttaaaat ggtaaagcgt ggttctacat tctgaaatca
     3901 acgttatcct acaaaaatga aatcaaccag ttccaaattt tagtaaaaat gctgacaatg
     3961 gcatcccaca atttttgcaa gaaattacgc gtttcctcat tatctaaatc cttcagcttc
     4021 ttcagtttgt cgccggcttg gctttgaatc atttctttta actcagtcgc ctgtttttta
     4081 aacgcatccg gatcttggtt gactacattg gattccgcga cgttcaccat gatattttga
     4141 atgaccgcaa tttcgtgatc acttaaaatc tgatacagtc cgcgctctgt taacgtttgg
     4201 ttgacaattt gattgattgt tgtactgttc agttgttgat gcgacgcttt tgcttcagcg
     4261 atttgagctt tcatttctgc aactgcttca ttcaacgctt catcagaata gccatcttta
     4321 ttttgatgat tttcactaat tcgtgctaaa tgattcattt cttggttcgc attttgaata
     4381 tcttgcgcat ttaaacgatg accttgtgtg gcataggctt tataaatgcc tgtcaacgca
     4441 ccttcgccag tcacttgatc gacagaagca attttaatcg tcgcatcttg aatacctgat
     4501 gtaatcgctg cattcatata ctgttctcgt gtaatacgtg taatattttc aggggtttca
     4561 atttctacat cgacaccact cgtaaagcgt ttcggtttaa tcaaagcact agaatggata
     4621 aagtcgtatt ctgtccctgt atattcaatg acatccgtat ttgtcacttt atacgtcgtc
     4681 acattgttgc cgactcccaa cttctctttc gtctcaacaa gttggttgtt attcaaatcg
     4741 gcaccttgga taaatatttc ttcttttggc ttaaattcat ttgcggcttg agcaacgcct
     4801 accattaaca tcgatgtgac cacgccactg atgaatagct ttttatacat tttcgtcact
     4861 tcctcctagt gctacgctat tttctctatt ttaccatgaa tgttcaacaa tactatcatt
     4921 cctcggacct aagcgtaaaa gtaccatgcg cgctaagaaa gatgtggcta aacgaacaat
     4981 tctgattcat gagaagtgcc ataatcaatg tcgtatccca tatcttgaat catgtcatag
     5041 tctaattgat tcggctgtcc acctgtaatt aaataatcgc ctacaaaaat tgaattcgcg
     5101 accattaacg ctgtcgcttg tagtgaacgt aaattaactt ctcttccccc tgcaatacga
     5161 atttcttttg tcggattgat taagcgaaaa agcgccaaaa tgcgtaaaca acgggtcggt
     5221 gtcagttgat ccatctcacc aaatttcgta cctttaatcg gatgtaaaaa gttcactgga
     5281 atactgtccg catcgatttc tttcaatgca aaagccatgt ccacaatgtc ttgatttgac
     5341 tcacccatac cacaaatgac tcccgagcat ggtgaaatat tgtttcgctt catcatctca
     5401 atagtattca cacggtcttc gtatgtatgt gttgagacca cttcatgatg ataattttca
     5461 ctcgtattca aattgtgatt ataacgatcg acccctgctg cttttaattt ctctgcttgc
     5521 gtctcattcg tcaaacctag gcatgcacat actttcaact gtggatgtgc cgctttgata
     5581 cgttcaaccg acgacgtaat atggtcaatt tccttatcac tcggaccgcg accgctcatc
     5641 acaatacaat acgttccaat ttcattctca gctgcgacgc gtgcaccttc tgtaatttca
     5701 tcctctgaga ttaacgcgta acgttgcttt tgcttcattt cacgtgattg accacaatag
     5761 ccacaatctt caggacaaat accacttttc gcatttaaaa tcatatttaa cttcacttta
     5821 tgtccgtaat aatgtttgcg tagttggtac gcttcatgaa caagattcat cgtgtcatag
     5881 gacggattta ccaacaaatc taatgcttca tctggagtca atgcacgacc ttctaatatt
     5941 tgtttcgcta ttttcatagt cattcctcct catataaaag tcagtatatc acaattgtaa
     6001 ccatttttat aataaagttt acaatctatg tagcggttca tgttcactca aagtagggta
     6061 tattgaagtt gtcacattaa attaaaatat cgcttataat aaagttagaa gcatcagatt
     6121 taagacagac cgcagtctaa aaacagatat ggaggcaaca aaatggatac attagatgaa
     6181 tttttgcaaa ccatcgacaa accagagcat cgtgagaaac tagcaacagt gatacaaacc
     6241 atactcgatc gttatcctga acttactttg gaaatcaaat ggaatcaacc aatgttattg
     6301 tacaaagaaa atagcacttt tattttagga ttcagtaaag cgaaacccca ctttgctgtc
     6361 gcaccagaga aacatacatt agatactttt gcgaaagaga tcgaaaaaac gggttatcaa
     6421 atgactaaaa tgtttatgaa gatcaagtgg acagatgaag tcaattatac gttgctatat
     6481 gatatcattg attttaatat tcatgataaa aaagactcac gcttcttctg gagacagtag
     6541 tttctttgcc gcttaccata aaggtgactc ggcttctcaa aaatactcaa tgttgaggag
     6601 tcagacagca ccttcgccct accaccatgc cctttaattt tgttatgcgc gcccttgccc
     6661 catcctttcc atttctcact caaaccctta aaaaaacatc cattttccat atatacatat
     6721 gctgcaatac gcctttaata acaaatgatt gagatttttc tgaaaatacc caaaattata
     6781 ttgacttgaa tataaagttc ttctacaata cataacatat cgcttagctg tgaagtcgga
     6841 attctaggag gcctgtatga ttgagtttaa aaatgtgaat aaaatattta agcaagggag
     6901 acattcggtt cacgccctta aagacatttc tttctccatt caagctggtg atgtttttgg
     6961 tgtcattggt tatagtggtg cgggcaaaag tacactcgtt cgtctgatca atcaattaga
     7021 acaacaaact tctggtgacg tttatgtcga tggccatcat ttaaatacat atgctcctgc
     7081 acagttaaga gctgtcaaaa aagatatcgg gatgattttc caacaattca atctattgga
     7141 ttctaaaact gtctttaaaa atgtcgccat gcctctcata ttacgtaaag tacccatgaa
     7201 tgaaattaag tctcgcgtcg aagaaatgct tcattttgta ggattatctg gtaaagcgaa
     7261 caactttcct aatgaactgt ctggcgggca aaaacaacgt gtggcaattg cacgcgcact
     7321 cgtgacacgt cctaaaattt tgctctgtga cgaagcaacc agtgcactcg atccagcgac
     7381 gacagattcg attcttcaat tattaaaaaa gacgaacgaa actttgggtg tcacgattat
     7441 cgtcattaca catgaaatga gtgtgattca aaccatttgt aaccgtgtcg ccattatgga
     7501 aaatggtgtc gtcattgagt tggatacggt gaaacaagtg ttcagtcatc ctaaaactac
     7561 aactgctcaa cgtttcgtat ccactgtcat taatacctca ccttctcaaa aagtgatgga
     7621 caaccttcaa attgatgaac gacaccaaat ctatcgccta tttatcgaat cgactcaaat
     7681 tacacaaaca ctcattaacg acttgattca aaaaacggcc gtaaatgtga atatcgtaca
     7741 tgcaacgatg gctgacattc aagaggagac agtcggctat ttatggttac ttatcaaggg
     7801 agacgcggcg caacaacaac aggtcacgtc ttatttcgat catcaacaaa tccaatatga
     7861 gaaaggggtg ccgacatgct aggttcatct attgatagtg cacaattact agaagcattg
     7921 tatcaaacat tatacatggt gaccatttca ctcatttttg gcgctttaat tggcgttcca
     7981 cttggcattg tattagtggc gacccgtcaa aatggtatat ggccaaacgc ttggattcat
     8041 cacattttaa acccagtgat taacattttg cgctctgtac cattcattat tttacttatc
     8101 gcaatcattc catttactaa attgattgta gggacatcta ttggcacaac ggcagctatt
     8161 gtaccattga ctgtttatgt agccccttat attgctagac ttgttgaaaa ctcactttta
     8221 gaggtagacg agggcattat agaagccgca catgcgatgg gtgccacacc gatacagatc
     8281 attcgttact ttctattacc tgaagcactc ggttcactta ttttatcgct cactacggca
     8341 attatcgggc tcatcggtgc aactgcaatg gctggtgctg tcggtggtgg cggcattggg
     8401 gatatggcac ttgtttatgg ttaccaacgt ttcgatacac ttgtgattat aattactgtt
     8461 gtcgttttag tgattatcgt gcaatgtatt caatctattg ggaatgcact cgctaaaaaa
     8521 gtacgacgac attaactgga ggacatattt atgaaaaaac tgattacctt tttagtatta
     8581 gccgtattcg tattaagcgc ttgtggcaat aacaaatcag aaaaagtcac acttggcgtt
     8641 gcttcaaatg acacaaaagc ttgggaaaaa gtaaaagaac tcgctaaaaa agaagatatt
     8701 gacttagaaa tcaagcaatt ttcggattat aacgttccta acacagcact caatgatggc
     8761 gatatcgata tgaacgcttt ccaacatttc gcatttttag aagcgtttaa aaaagcaaac
     8821 aagggcactg aaattacacc aattcgtaca actgtattag cacctttagg catttactca
     8881 gaaaaaatca aagacattaa agatgtgaaa gatggcgcca aagtggtcat tccaaacgac
     8941 gtgtctaacc aagcacgtgc attaaaatta cttgaaaaag cagggcttct cgaattaaac
     9001 aaagatttcg gtttatcaag ttctattaaa gatattaaaa gcaaccctaa aaacttagat
     9061 attaaagcag tcgatgccca acaaacagca agagcattgt ctgatgttga catttcagtg
     9121 attaacaatg gtgtcgcaac aaaagcaggc ttagacgcga aaaaagatcc gatttattta
     9181 gaggcttctg actctgatgc agttaaacct tatatcaaca tcatcgcggt caactcgaaa
     9241 gataaagaca ataaagtgta caaacgtatt gctgaactgt accattctga agaagcaaaa
     9301 gcagcattga aagaagatac aaaagatggt gagttaatta tcgatttaaa acaagacgaa
     9361 attaaagcca ttgaagatag tttgaaatag cttatgttaa accgagtctg agacaaaagt
     9421 gcttcagact cggttgttta attattttat attgtgttgt actcattaaa acattctata
     9481 caaatttcag cattcagaac aaattgtaat tttctttgct ctatccataa aattctccgc
     9541 taatctacta atgtgcttct acttcaaatt gttgctttaa ccattgttta gttgaactat
     9601 tagcaaaagt gtaatcaatc gccttaaaat taatgcgtac aatatcttcc cagtttaaca
     9661 atttgtgctc taacaacagc gcatattcat ctaataaatt cgtttgtgtt acggtacgat
     9721 tatctgtatt gattaaaaag gcgatgtttt cttttaatag acgttgtagg tctaagctat
     9781 ctaatgattc gatagctttc gtttgtaagt tacttttcgg gcaaaattcg agtaagacgt
     9841 ctttggcttt cacagttgcc agtacatcat catcttgtag agccgctaca ccatgaccaa
     9901 tacgttgtgc accaaatcgt actgcatcat acacattttt agcacaacca cattctccag
     9961 catgtaacgt aatgttcaat ccttgttgtt gcgcatattg aatcaatgct tcatgttccg
    10021 tggtcggaga tgccgcttca tcaccagcta aatccacacc tacaatatat gcttctaaag
    10081 tttcatcatc tcgaagactg tcgaaaatcg ctcggttcat ttcgtccgaa tgatgtttca
    10141 tcccacatac tagcattctc actttaatgc caaaagtttg ttcagccaaa gacgcacctt
    10201 tgcacacagc tgttaaaatt tcgtcaattt ccaatccttg tccttgatga aatgcgggtg
    10261 caaatcgaat ttcaatatat tttacaccat catgtactgc ttgttctgca acatcaacga
    10321 cagcgtcaat caaacttata cgtgtctgca tcacttttaa aatttcgtca aatgactgta
    10381 gatattccgc taaactttga caatgttgat ccactgtcac tttgtccatc tgaataggta
    10441 taccttgctg ttggctttgc ttttcaaggt attccaagct aaccgagcca tccaaatgac
    10501 aatgcaattc aagcttgggt atccctttta attccgcatt cataatatcc tcttttcaat
    10561 atctttttaa tttctaattt tactgtgatt atattgattg tcaatacatt ttttaaaatg
    10621 tcatgattgt cttattcatc cactattact gacgtgaatt tcaatgtcta atgtcagtgt
    10681 tttctaaaca ttcctccaac atttcccata agatgtgttc ataagcatca atctctttaa
    10741 tatgattttt gttcaacctt gaaatcattg taactaccta taacatgtga tggcctttac
    10801 cgaacgtaac aacactctca ttcaatatat ttattaatga gtatattaat aatattttag
    10861 tgcaaaatgt ttctgttttt ttcgaaaagg taataagtat attgttacag actacaatta
    10921 ctaaaggagc gttggaaatg gataataaaa agctagaaca attgaaaaaa gaccaaaaaa
    10981 acaatgatgg taaagcaatg acgacgaata atggtgtcaa agtgagtgag gatgaaaata
    11041 ccttaactgt cggcgaacgt ggtccaagct tgctcgaaga tttccatttt agagaaaaaa
    11101 tcatgcactt tgaccatgag cgtatccctg aaagaattgt ccatgcgcgg ggatttggtg
    11161 ctcatggtga attccaagtt tataaagatt tatcagccta cacgtctgca gactttttaa
    11221 ctcatccaga aaaaacaacc cctgtatttg taagattttc gactgtacaa ggttctaaag
    11281 ggtcaccaga tacagtgaga gatgtacgtg gttttgcgac aaaattctat actgatgagg
    11341 gaattttcga cctcgtaggt aatgacattc cagtattctt cattcaagat gcgattaagt
    11401 tccctgattt aattcatgcg gttaaacctg agccacataa tgaaatgcca caaggtggaa
    11461 gtgcccacga tactttttgg gatttctttg cgcaaaatcc tgaatcaaca catacagcat
    11521 tttgggcgat gagtgaccgc ggtattccga aaaactttag acaaatggaa ggattcggtg
    11581 ttcatacctt ccgcctcgtt aaccgcgaag gtcagtctta ctttgtgaaa tttcattgga
    11641 agccattaca cggtttagaa tcattggttt gggatgaagc acaaatttta tctggtaaag
    11701 atatcgactt ccaccgtaaa gatttatatg aatctatcga aaaaggtgac tatccggaat
    11761 gggagttagg acttcaaatt attcgtccag aacaagaatt cgactttgat tttgatattt
    11821 tagacccaac aaaaatttgg ccagaagatc aagtcccagt cgaaattgta ggtaaaatga
    11881 cgctcaatcg caatgtgtct aacgtgtttg acgaaacaga acaagcagcg ttccacccgg
    11941 gtcatattgt tcctggcatt gacttctcaa atgacccttt attacaaggt cgcttatttt
    12001 catatacaga cacgcaaatt tcaagattgg gcggacctaa ttttaaccaa atcccaatca
    12061 accgtcctgt caatgaagta cacaacaacc aacgtgacgc catgcatcaa atgaatgtgc
    12121 atcaagggca aacagcttac cataaaaatg cattaaacaa taacgaccct cacacaacac
    12181 cgagagagga aggcgggttt gaacattatc aagaaaaagt agaaggtcat aaaattagaa
    12241 aacgcagctc aagttttgaa gattattata gccaagcgaa attatattta aacagcttaa
    12301 cacccgctga atatggtcat atggtagcag gtttctcatt tgaaattggc atgtgcaagt
    12361 ctgtgatggt caaacaaaac gccgttaatc aattaaataa agtggatcgt caattagctg
    12421 aagcagttgc ggcaaatgtt ggcgtttctg tcccagaaga gaatgaagaa gtacaatcta
    12481 caacgaaaga cagtcaactc acaatggaaa aattcgatat tccattacca ggacattccg
    12541 tagctgtatt agtaagtggg gagattagcg aagagacact aaaatcttat gcgaaagtat
    12601 ttgcagagaa caaactgaat tatgcattcg ttggtaaaca accgcgtgcc attgacgaag
    12661 atttcggtat tactgaaaca tacgacaccg cacaccctac actattcgac agtgcaattg
    12721 tattatcaga cggctcagac ctattgccag aagcagaaga atttgcggaa atgacgtata
    12781 aacataaaaa accattagtg gtcaatgaaa aagccgcaaa tcaactcggt cgttcaaaaa
    12841 tcaaactcaa cgcgcccggt gttttcacat cagatgaacc caatacgatt gtaaaagcat
    12901 ttgatagagt gagatattgg gaccgctaaa atcatacaga aatcgacccc gtaccctaca
    12961 aatgataagg gacggggttt tatgattact tgcctacatt ttctgacttt taccaatagt
    13021 tatcttttat tttttatgtt attttaaaca ctcataattt atggatatag aacagattca
    13081 ttttttgcgt ttattgcaaa ttcatccatt tccttcttcc acatcaatag aattcaaact
    13141 ctttagattt tcaagtaact catatcatta tctagcacgc ctattctcgc tagctttata
    13201 ctgctatttt catttgctct cacttgaata tcttctattg tactattcca tatatcacgg
    13261 caatattcag gcatactcat aaataacttt tgcatagcta acaaaaatgt aatcaatctt
    13321 tgttgataat gaaatttttg aagcctattt aaatattctt tatcacttgc gtgtccagaa
    13381 c
//
LOCUS       DANHPA010000072        13370 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.072, whole genome shotgun sequence.
ACCESSION   DANHPA010000072 DANHPA010000000
VERSION     DANHPA010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 13370)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13370)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13370
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.072"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(66..1460)
                     /locus_tag="PTC28_001671"
     CDS             complement(66..1460)
                     /locus_tag="PTC28_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teicoplanin resistance protein VanZ"
                     /protein_id="HDK5716953.1"
                     /translation="MGQCAVCHHEKLPHQSVCPNCQNQILYSKTPSPQSPKQRDAAQS
                     SSSNNNKRPPSLKKVIPIAIVSFIIILLIILFLLLRNFNSPEAQAKILINAVNNEDNA
                     KVSNLLSSKENKVGRQEASTYIKFVKQEVGMKLFEKEVYNTVDGLNHETAVASYIKTR
                     EGQDVLRISKNGRRYLIFDNLSFLAPTKQAIVKPKEKATFEFDSDGAQKKVVAEAGQS
                     VSLGQFIPGSYAIDTVKTTDRGTYEGQLKFDFVNSKNETIPVTEDFKEAQVKVSLKNV
                     SDLKEVKVVINDEKIAQNKNDTYGPFPVNQDIKVYAEGEAYDHTFKTNTEVIKKDDVQ
                     SENKITVSFDKDEIEKYRQSKEKDTLNKIKDFFKKYTASLNEAYESHDFDLVSKYLKE
                     NTTNYEAMRSNVKGQNQYKFKNPVVIDVSRNADYYAVTVEKEDAQGRTIQSHYLLDGD
                     ENANHLKIVNYQNY"
     gene            complement(1567..2031)
                     /locus_tag="PTC28_001672"
     CDS             complement(1567..2031)
                     /locus_tag="PTC28_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDK5716954.1"
                     /translation="MTHSNLMNQHVTFMGEFMTNVNALTAGLLKDLRSRYGISNEQSS
                     VLLMLSNDKSLTLTEITLRQGVNKAAVSRRIKKLVDLGLVKWVNMAYEYDKRLKYVAL
                     TEAGIDYVRASRNLIANLANEMLSDIPLEKIEQTRDMLELIDERIQGQLNQL"
     gene            2172..3125
                     /locus_tag="PTC28_001673"
     CDS             2172..3125
                     /locus_tag="PTC28_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HDK5716955.1"
                     /translation="MNLLQILLLISYIIILTLIKIKPHLFLRIHSFTAVLYIHMLFIT
                     ISYITHADRLIWLMITLVIGLILLALTLYRHIQTYWHIIGRVITYHLAIVALIIGSLL
                     VIPLIPAVLTIPFQLLVQLAIVFLTAWQTYLFMTFTFLHHLPPVTRANIIVLGAGIYT
                     EAVTPMLKARLDRAIALSRQLEKVHIIVSGGQGPDEPISEALAMQRYLIQQGIAPKQI
                     TMEDQSTNTRQNIYYSKHYLALHQQPHTIIVTSSFHILRALRLAERQQLHAFGYGAPT
                     PHHWVSRELIRDYSGLLFQYPRVWALFTIVQVGICILNIFS"
     gene            3256..3519
                     /locus_tag="PTC28_001674"
     CDS             3256..3519
                     /locus_tag="PTC28_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbgT family transporter"
                     /protein_id="HDK5716956.1"
                     /translation="MLFFSLCIVLAILTEVVSQLDTAVKHPGTDKTIAARIILSHDGF
                     VVFLNGVLLTFMINLCTIKNREWETKMSQSLPIIYEKIVSEQN"
     gene            complement(3562..4251)
                     /locus_tag="PTC28_001675"
     CDS             complement(3562..4251)
                     /locus_tag="PTC28_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5716957.1"
                     /translation="MSLVVKDLVKTFGKGDAATKVLKGINFEVQPGEFVILNGMSGSG
                     KSTLLTIIGGLLSPTEGKIQLDGEDLGGLSQKALTDKRLKDIGFIFQASHLVPYLKVH
                     EQLELVGKEAGMDRRTAQQRAKMLLNEIGLSHRENVYPHMLSGGEKQRVAIMRAWMNQ
                     PKLLLADEPTASLDAKRATEVVEMIKQQVRQEGAIGIMVTHDQRLFDYADRIIYLNDG
                     ELMETATAMTV"
     gene            complement(4248..5312)
                     /locus_tag="PTC28_001676"
     CDS             complement(4248..5312)
                     /locus_tag="PTC28_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HDK5716958.1"
                     /translation="MKLALNELKFYKFKYLLITFIVILLASMVLFITGLAQGLARENI
                     ALIDQFKSERFVIQKDVDQQLEKSNIDLKTQQDIEENVKSAPLKLAMATMKHQDNKTD
                     MLFATMPKEARPALKAGHLPEKANEVVLNQKLAGEGVQIGDQVNIEDKDVTLKVVGFF
                     DDAMYAHTNIAMTTDEGLKDIAGQHVATSLYFLNDVTAKQLKNIEGISGIEIVNKQDL
                     TDAIPSYQAEQAPLNMMIVSLFVITAIVLTAFFYVMTIQKTSEIGILKAIGVKTSHLL
                     WSLLFQILFVTMLGVIIALLLITGLKATLPVTMPFFINSGMMLLVVVVFIIVAIVGAL
                     LSLVRVFKIDPIEAIGGGQV"
     gene            5647..6324
                     /locus_tag="PTC28_001677"
     CDS             5647..6324
                     /locus_tag="PTC28_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDK5716959.1"
                     /translation="MSVTCLIVDDDPEILNYVATHLQHKGYQAVTVASGEAALEYLEK
                     HTIDIAIVDVMMDGMDGFELCETLKYDYEYPVIMLTARDALSDKERAFLAGTDDYVTK
                     PFEVAELIFRIQAVLRRYQIATETLLTLGNLTIDQTQLEVKVETKGMILPHKEFELLS
                     LLVAYPKQVFPREQLIEKIWGIDYEGDERTVDVHIKRLRARLKKLGANVHIETVRGIG
                     YKVTQDA"
     gene            6317..7708
                     /locus_tag="PTC28_001678"
     CDS             6317..7708
                     /locus_tag="PTC28_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDK5716960.1"
                     /translation="MLKSLYSRFALYTFTVMLISSLLSFEIANIYYHFQLKEKNDAKI
                     MATLKRAEAYKDVQTSQNLDRYLALLGDLNYQVVAYDKQGHATYYGEPFRKQNLTISD
                     IQRVQSGKDYHGIGNRPFNPVITGFFDNETRNTVGTHFTTPNGNVAVFIRPDIGHAFG
                     EFRIFLLVLLVLLVLFSIALVTWSTYALVKPVKQLKYATERLMAGDFATPIAVTRRDE
                     LGVLQQHFDTMRLELKQLDDMRQHFVQNVSHEIKTPLTHIHHLLTQLQQEHTTPQQAR
                     YIERIYDETHRLSQLVRQLLLLSELDNDTHLQFDDTFLANACILDILKHENYAIDQKN
                     QVLLYDLEAVTIRGNSRLIAQAFENVIRNAIKYTEAFGTIEIDLTAENDQMILKVRDD
                     GPGMNDAVKQRIFERFYKSSSHTDSNGLGLAISKSIIERHGGRIEVESKIDHGTTFTI
                     FLPRIDASQPAQS"
     gene            complement(8060..9565)
                     /gene="mqo"
                     /locus_tag="PTC28_001679"
     CDS             complement(8060..9565)
                     /gene="mqo"
                     /locus_tag="PTC28_001679"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase (quinone)"
                     /protein_id="HDK5716961.1"
                     /translation="MKNLHNKTDVVLIGGGIMSATLGTLLKELEPEWDINVFERLDKC
                     AQESSNVWNNAGTGHSALCELNYTSEKEDGSVDITKAIKINEQYQVSKQFWSYLVKNG
                     QLKQPEGFIRTVPHMSFVTGEKNVNFLKARVKALRENVLFQGMDITDNEETLKKWVPL
                     MMEGRQQNGEPIAATRDESGTDVNFGALTHKMLSNLEAKGGSLYYEHEVLDLKQHRDG
                     MWTVKIKDLKENRVFTVVSKFVFIGAGGASLPLLQKTGLPESKRIGGFPVSGMFLVCK
                     KPEITHQHKAKVYGKAEVGAPPMSVPHLDTRYIDGERALLFGPFAGFSPKFLKRGSYF
                     DLIKSVKPNNVATMLAAGAKEMGLTKYLIQQVLLSNKERMNDLRKFVPTAKDEDWQVV
                     VAGQRVQVIKDTDDKGKGTLQFGTEVITSQDGTLAALLGASPGASTAVAVMLDILQRA
                     FKDKFNQWEPQVKEMVPSFGVRLTDDIALFKQLNHEISENLKLDESGALLS"
     gene            9992..11167
                     /locus_tag="PTC28_001680"
     CDS             9992..11167
                     /locus_tag="PTC28_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HDK5716962.1"
                     /translation="MKSITFLMHNIFAVGGTVKTITNLANQLVHQGHQVTIISIFKSK
                     QQPYFELDSRVTVKSLVHYQLGLRNLIPLAANRIRKFTPLLKPKYLTQYEPGFRQYSS
                     YIEKKMIRAIQNDTSDIFVGTRASHNLLIARFAKGHQLTIGMEHMNLDAHRQELKEEL
                     LTYYPHLNAITTLTEADKQRYTQYLDAPIFVVPNMIDEKRHHIMKKNQIIAAGRFEYE
                     KGFDLLIQAVYEIQEDLRDFGYTVSIFGDGSEKEALQQQINFLRLQDLVFLRPTTQHL
                     STYIAESKITCIPSRNEGFGMTILEAMNQGSIVVSFDGNTGPKSLIQHSRNGFLVPHL
                     QASALAMQLLEIVEYGHSKYLNPIIQSGYQTVEQYQPESIYNQFKTAMDHVIATQSS"
     gene            complement(11635..13239)
                     /locus_tag="PTC28_001681"
     CDS             complement(11635..13239)
                     /locus_tag="PTC28_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HDK5716963.1"
                     /translation="MLVEHFDPFHNLAISALVASIPIILFLLCLTVFKMKGIYAAITT
                     LVVTLVIALVVFKLPVGIASGGILEGFYQGILPIGFIVMMAVWLYKVTVATGQFAIVQ
                     DSITTISEDQRIQLLLIGFAFNAFLEGVAGFGVPIAICAVLLIQLGFKPLQAAMLCLV
                     GNGAAGAFGAIGLPVSVIDTLALKGDVSALDVAQATNLSLPILSVIVPFLLVFIIDGF
                     KGIKETLPAIIVTVVPFVVLQVFFNQFFGPELVDILPPLASMGALALFSKKFQPKNIF
                     RLNAGEEKMEVKHHSFREVVFAWSPFIILTILVLIWSSKAFKGLFLEDGALSFMNVKF
                     GIPGTMNDISGHPIMLTFNILNQTGTALLIAGIITVLISSKVNFKRAGALFVEAFKEL
                     WLPILTICFILAIAKVTTYGGLTSAMGEGISKTGAAFPFLSPILGWIGVFMTGSVTNN
                     NALFAPIQASVAPQVGTSGALLVGANTAGGAIAKLISPQSIAIATAAVKQVGRESELL
                     KMTLKYSVGLLIFWCIWTFILSLILG"
BASE COUNT         4113 a         2779 c         2230 g         4248 t
ORIGIN      
        1 aaaaaatgaa gttccactcc aacaacggac tagaacttca ttaggatgtt attcactttt
       61 atactttagt aattttgata gttcacaatt tttaagtggt tggcattttc atccccatct
      121 aataaataat gggattgaat tgtacggcct tgtgcgtctt ctttttcaac tgtcactgcg
      181 tagtaatcgg cgttgcgcga aacatctatg actacaggat ttttaaattt atactgattt
      241 tgacctttca cattcgaacg catcgcttca taatttgttg tattttcctt taaatattta
      301 gaaactaaat caaaatcatg gctttcatat gcttcattta acgacgccgt atactttttg
      361 aaaaagtcct tgatcttatt caatgtatct ttttctttag attggcgata tttttcaatc
      421 tcatctttat caaacgacac agtgattttg ttttcagatt ggacatcatc ttttttaatc
      481 acttctgtat ttgttttaaa tgtatgatcg taagcttcac cttcagcata gactttaatg
      541 tcctgattga ctggaaacgg cccataagta tcatttttat tttgagctat tttttcgtca
      601 ttaatcacca ctttaacctc ttttaaatca ctcacatttt taagtgacac ttttacttgg
      661 gcttctttaa agtcttcggt cactggaatg gtttcatttt tactattcac aaaatcaaac
      721 ttcaattggc cttcatatgt accgcggtcc gttgttttta cagtatcaat cgcgtaactt
      781 cctggtatga attgacctag cgatacggat tgtcctgctt cagcgaccac tttcttttgc
      841 gcgccatctg aatcaaactc aaacgtcgcc ttttctttcg gcttcacaat cgcctgtttc
      901 gtcggtgcta agaaacttaa attatcaaag attaaataac gccgcccatt tttactaatt
      961 ctcaacacat cttgaccttc acgtgtttta atataagagg ctacagcggt ttcatggtta
     1021 agcccgtcca cagtgttgta tacttctttt tcgaacagtt tcatgcccac ttcttgtttt
     1081 acaaatttaa tgtaagttga tgcttcttgt cgacctactt tattttcttt tgaacttaaa
     1141 aggttggata cttttgcatt atcttcgtta ttcaccgcat taatcaagat tttagcttga
     1201 gcttcaggag aattaaagtt tctgagcagc aaaaataaaa taatgagtaa aataataata
     1261 aaacttacaa tagcaatagg gatgactttt tttaatgacg gtggtctttt attgttattg
     1321 gaagatgatg actgtgctgc atctcgttgt ttaggtgact gtggactagg ggttttagaa
     1381 tacaatattt gattttgaca atttggacag acgctttgat gtggtaactt ttcatggtga
     1441 cataccgcgc attgacccat acgtacacct cctattctat tcattgagct cattcgtcat
     1501 atttttctat cataaaggtt aactataaaa actgcatcag acgtgagtag tagcgcacat
     1561 gatgcactac agttgattca attgaccttg tatccgttca tcaatcaatt caagcatgtc
     1621 tcgtgtttgt tcaatttttt ctaatgggat atctgacaac atttcgtttg ctaaatttgc
     1681 aattaaattt cttgaagcgc ggacataatc gatacccgct tcagtcagag caacatattt
     1741 caatcgttta tcatattcat atgccatatt tacccatttg actaaaccta aatctactaa
     1801 cttttttatt cttctactga ctgccgcttt attcacacct tgacgtaatg taatctctgt
     1861 taatgtcagt gacttgtcat tagaaagcat taataacaca ctcgattgtt catttgaaat
     1921 gccgtatcga gatcttaaat cttttaataa tcctgctgtg agtgcattca cattcgtcat
     1981 aaactcaccc ataaacgtca catgttgatt cattaaattt gaatgggtca tttttcttca
     2041 ccgccttcat tacaaacaac tatctttacc atcgtaccaa caattatttt ataagggaac
     2101 ctcatttttt gacatttttt gtaaagaatt tagtatcatt accgtaaatg ataaaataaa
     2161 ggacttaaaa aatgaattta cttcaaattt tgctattaat aagctacatt ataatcttaa
     2221 cattgataaa gataaagcca catctttttt tacgcatcca ttcctttacg gcggttctat
     2281 acattcatat gcttttcatc acgatcagct acatcacgca tgccgatcgc ctcatatggt
     2341 taatgatcac tttagtcatt gggttgattt tacttgcgct aacgctatat cggcacattc
     2401 aaacatattg gcacatcatc ggtcgtgtca tcacttatca cttagcgatt gtcgcgctga
     2461 ttattggaag tttattagtc attcctttaa taccagccgt tttgacgatt ccttttcaat
     2521 tgttagttca attagccatc gtctttctca cagcttggca aacttatttg ttcatgacct
     2581 ttacattttt acaccacctg cctcccgtga cacgtgccaa cattatcgtt ctcggtgcag
     2641 gcatctatac agaagctgta acaccgatgt taaaagcaag gttagatcgc gccatcgcat
     2701 tgagtcgcca attagaaaag gttcacatta tcgtcagtgg tggacaaggc ccagatgaac
     2761 cgatatctga agcactcgcg atgcaacggt atttaataca acaagggata gcaccgaagc
     2821 aaattactat ggaagaccag tcgaccaata cgcgccaaaa tatttactat tccaaacatt
     2881 acttagcgtt acatcaacaa ccacatacca tcatagtgac gagttcattt cacattttac
     2941 gtgcattacg actcgctgaa cgccaacaac tacatgcgtt cggttatggt gccccaacgc
     3001 cacatcattg ggtcagtcgt gaactgatac gtgattacag cggcttactt tttcaatatc
     3061 cacgagtttg ggcgctcttt actatcgttc aagtcggtat ttgcatttta aatatatttt
     3121 cttaaatttc agataagtaa gcgcataatt cagatagggt gtgatgtgat gaagaataaa
     3181 agcgaaaaac aacccgtaat ttcattattt ttaaatcaag tcgaaaagtt aagcactcgt
     3241 tgacctgacc cgataatgct cttcttttcg ttatgtattg tgcttgccat tctgactgag
     3301 gtggtgtcac aattggatac cgctgtgaaa catccaggta ccgacaaaac gattgcagcg
     3361 cgcattattt taagtcatga tggctttgtg gtgtttttga atggtgtctt acttaccttt
     3421 atgattaacc tatgcacaat aaaaaatagg gagtgggaaa ctaaaatgtc ccaatccctt
     3481 cctataattt atgaaaagat agtatcagag caaaattgat atctcagttt ctcctactca
     3541 aatatgctca atacctccct atcaaactgt catagcagtc gctgtttcca tcaattcacc
     3601 atcattaagg taaatgatac gatctgcata atcaaacaag cgttgatcat gtgttaccat
     3661 gataccgatt gcaccttctt gacgtacttg ttgcttaatc atttcaacca cttctgtcgc
     3721 acgtttagca tctagactcg cagtaggttc atcagcgagt aacaatttcg gctgattcat
     3781 ccatgcacgc ataatggcaa cacgctgttt ttcaccacca gataacatat gtggataaac
     3841 attttctcta tggctcaatc cgatttcatt taataacatt tttgcacgct gttgtgctgt
     3901 tcgacggtcc atccccgctt ctttacccac gagttccaat tgttcatgca cttttaaata
     3961 aggaactaaa tgagaagctt ggaaaataaa accaatgtct ttcaaacgtt tgtcggttaa
     4021 tgctttttga gacaaaccac ccaaatcctc accgtctaat tggattttgc cttcagtagg
     4081 agataacagt ccgccgataa tcgtcaacag tgtagattta ccagaacctg acatcccatt
     4141 taaaataaca aattcacctg gttgcacctc aaagttaatg ccttttaaca cttttgtggc
     4201 agcatcacct ttaccgaatg ttttcactaa atctttgacg actaaactca tacttgtccc
     4261 cctccaatcg cttcaatagg atcaatttta aagacacgca ctaatgaaag taatgcgccg
     4321 acgatagcta caataatgaa aacaacaacg acgagtaaca tcatgccact attaataaag
     4381 aatggcattg tgacaggtaa cgtcgctttt aatcctgtaa tgagtaataa tgcgatgatg
     4441 acccctaaca tcgtcacgaa taaaatttgg aataataaac tccataataa atgtgacgtt
     4501 ttaacgccaa tcgcttttaa aatcccaatt tctgacgttt tttgaatggt cataacgtag
     4561 aaaaatgctg tcagtactat tgctgtaatc acaaataaac ttacaatcat catattcagt
     4621 ggtgcttgct cagcttggta gctcggaatc gcatccgtca aatcttgttt gttgacgatt
     4681 tcgataccag aaatgccctc aatattttta agttgttttg ctgtgacatc atttaaaaag
     4741 taaagtgacg ttgcgacatg ttgaccagca atatctttga gtccttcatc cgttgtcata
     4801 gcaatatttg tatgtgcata catcgcatca tcaaagaaac cgacgacctt taaagtgacg
     4861 tctttatcct cgatattgac ttggtccccg atttggacac cttcccctgc taatttctga
     4921 ttcaaaacga cttcatttgc tttttctggt aggtgccctg cttttaatgc cggacgcgct
     4981 tcttttggca tcgtcgcaaa aagcatatcc gttttgttat cttgatgttt catcgtcgcc
     5041 attgctaatt ttaatggcgc tgatttaaca ttttcttcaa tgtcttgttg cgttttcaaa
     5101 tcgatatttg atttttcaag ttgttgatcg acatcctttt gaatgacaaa gcgttctgat
     5161 ttgaactggt cgatcagtgc gatattttct cttgctaaac cttgtgctaa ccccgtaata
     5221 aaaagcacca tacttgcaag aagaatgacg ataaatgtaa ttaataaata cttaaactta
     5281 taaaatttga gttcgtttaa tgcaagtttc atactcatat ctccctttca atttcatctt
     5341 ggatatacta tatcgcccat ttatgaactg aatatgaaca agatacattt ttgtgataca
     5401 ctttaaaatc gttatcaaca actgaaaaat agaagtggga catataactt atcagccgca
     5461 tcactcatgg atttacgatt tatttattat tagagaatgg acatcatatt ttgcgacatg
     5521 gctcacactt ttcatttcca attgaaactt tgaataaaaa catttatgat agcttcaaca
     5581 gcttcacaac gttatatact tatataccgt aaaggctgaa attgtacctc aaggaggacg
     5641 gtcaatgtgt cagtcacatg tttaattgtt gatgatgatc cggaaatttt gaattatgtc
     5701 gcaacacatt tgcagcataa aggctatcaa gctgtcactg tcgcaagtgg tgaagcggct
     5761 cttgaatacc ttgaaaagca tacaattgat atcgctatcg tggacgtcat gatggatggg
     5821 atggacggtt tcgaactgtg cgaaacgtta aagtatgact atgaatatcc cgtcattatg
     5881 ctgactgctc gggatgctct gagcgataaa gagcgcgctt ttttagcggg aacggatgat
     5941 tatgttacca aaccatttga agtcgctgaa ctcatcttcc gtattcaggc cgtgctcaga
     6001 cgttatcaaa ttgcgactga aacgcttttg acactcggta acttgacgat tgaccaaaca
     6061 cagctcgaag taaaagtgga gacgaaaggt atgattttac cgcataaaga attcgaattg
     6121 ttaagtttgc tcgtcgctta tccgaagcaa gtctttccgc gtgaacaatt aatagaaaaa
     6181 atttggggta tcgattatga aggagatgaa cgcaccgtgg acgtccatat taaacgttta
     6241 agagcacgtc taaaaaaact cggggccaat gtccatattg aaacagtacg cggcatcggt
     6301 tataaggtga cacaagatgc ttaaatcatt gtactctcgt ttcgcactgt ataccttcac
     6361 tgtgatgctc attagttcgt tactcagctt tgagattgct aatatttact accattttca
     6421 attaaaagag aaaaatgacg ccaaaatcat ggctacttta aagcgtgccg aagcgtataa
     6481 agatgtacaa actagccaaa acttagaccg ttatttagcg ttattaggag atttgaatta
     6541 tcaagtcgtc gcctatgata aacaaggtca tgcaacatat tatggtgaac cgtttcggaa
     6601 acaaaattta accatatccg atattcaacg ggtgcagtca ggaaaagatt atcatggtat
     6661 cggaaacaga cctttcaatc cagtgattac aggctttttt gataatgaaa cacgtaatac
     6721 agtcggtaca catttcacaa ctcccaatgg caacgtcgca gtttttataa gacctgacat
     6781 tggccatgct tttggtgaat ttcgtatctt tttactcgtg ctactggttt tacttgtcct
     6841 attctccatt gcactcgtca catggtccac atacgcatta gtgaagccag tcaaacagtt
     6901 aaaatatgcc actgaacggt taatggctgg cgatttcgca acacctattg ccgtcacacg
     6961 acgcgacgaa ctaggtgtcc tgcaacaaca tttcgacacg atgcgactcg aattaaaaca
     7021 actcgatgat atgagacaac actttgttca aaacgtctcg cacgaaatta aaacaccttt
     7081 aacacatatt catcatttat tgacgcaatt gcaacaagaa catacgacac cccagcaagc
     7141 acgctatatt gaacgcattt atgatgaaac acaccgcttg agccaactcg tgcgtcaact
     7201 gttgttattg tcagaattag ataatgatac acatttacaa tttgatgata cttttttagc
     7261 taacgcttgt attttagaca ttttaaaaca tgaaaattat gccatcgacc agaaaaatca
     7321 agtgcttctc tatgatttag aagcagtcac cattcgaggc aactcgcgtt taatcgctca
     7381 agctttcgaa aatgtgattc gcaatgctat taagtataca gaggcgttcg gtaccattga
     7441 aatcgatctt actgctgaaa acgatcaaat gattttaaaa gtacgagatg acggccctgg
     7501 catgaatgat gcagtaaaac aacggatttt tgaacgcttt tataaatctt ctagccatac
     7561 agatagcaat gggctcggac tcgcgatttc caaatctatt attgaacgtc atggtggccg
     7621 tatcgaagta gagagtaaaa tcgatcatgg gacgacgttt actattttcc ttccacgtat
     7681 tgatgcatct caacctgctc agtcataatc ggtgtggcaa aaagcatcta agaaagtgta
     7741 gaatggttca gcataaatac tttatacatc acaaaacaca agatgtattt gcgttttgtg
     7801 atgtataaga ataagtaacg attgtcatct tcacctgctt tgacagtgcc gctctcacag
     7861 attgcaaaac cgtacaagac tcctcatcaa gctgcagtcg aaagtccacc aacgcttgat
     7921 gtaactattt catcaagcgt tggctagttg agacggtagt gccttggaaa acgaagcatg
     7981 attaagcaat ttgttgatta ttttattatc gcaaaaaagc agtgaagcca tatcgcctca
     8041 ctgctttgtt atctacaaat taacttaata acgcacccga ttcatccaac ttcaagtttt
     8101 ccgaaatctc atgattcaat tgcttaaaca acgcaatatc atccgtcaaa cggacaccaa
     8161 acgacggtac catctctttc acttgtggtt cccattggtt aaacttgtct ttgaacgcac
     8221 gttgtaaaat atctaacatg actgcaactg ctgtagatgc ccctggtgaa gcacctaaca
     8281 atgccgctaa tgtaccatct tgagacgtaa tgacttcagt cccaaattgt aatgttcctt
     8341 tgcctttatc atctgtgtct ttaatcactt gaacacgttg ccctgcgaca accacttgcc
     8401 aatcctcatc tttcgctgtt ggcacaaatt ttcttaaatc attcattctt tctttattag
     8461 ataacaatac ttgttgaatt aaatatttcg taagacccat ttctttagca cccgctgcta
     8521 acatcgttgc aacattattc ggtttcacag acttaattaa atcaaaatag gatcctcttt
     8581 ttaagaactt tggtgaaaaa cctgcaaacg gtccaaataa taaagcacgt tctccgtcaa
     8641 tataacgcgt gtccaaatgt ggtacagaca tcggtggcgc acctacttca gctttaccat
     8701 atactttcgc cttatgttga tgcgtaattt ctggtttttt acatactaaa aacataccac
     8761 tgactgggaa gccaccgata cgcttcgact cgggtaaccc tgttttttga agtaacggta
     8821 aacttgcacc gcccgcacca ataaatacaa atttagaaac gactgtaaag acacgatttt
     8881 cttttaagtc tttaatttta acagtccaca tgccatcacg atgttgcttt aaatcgagta
     8941 cttcatgttc gtaatataat gaaccgcctt tagcttctag attgcttaac attttatgcg
     9001 tcaatgctcc aaagttcaca tctgttcctg attcatcacg tgtcgcagca atcggttcac
     9061 cgttttgttg tcgaccttcc atcattaaag gcacccattt tttcaacgtt tcttcgttat
     9121 ctgtaatatc catgccttgg aataatacat tttcccgcaa tgctttcaca cgtgctttta
     9181 agaagttcac gtttttctcc cctgtaacga aactcatatg tggtaccgtg cgaatgaaac
     9241 cctctggttg tttaagctga ccatttttta caaggtatga ccaaaattgt ttcgaaactt
     9301 gatactgttc attaatttta atggcttttg taatgtcgac tgagccatct tctttttcac
     9361 ttgtatagtt caactcacat agtgcagaat gtcctgtgcc cgcattattc cacacgttag
     9421 aactttcttg tgcacattta tctaaacgtt cgaaaacatt aatatcccat tcaggctcta
     9481 actcttttaa taatgttcct aatgttgcac tcatgattcc gccaccaata agtacaacat
     9541 ctgtcttgtt atgtaagttt ttcataacaa tacagacccc ctttttcgtt ttaaatcatt
     9601 cacagcatcc tatgttgtca aatccatctg ttacattcat aaagtataaa aatatttcga
     9661 ctattccaat tgattatacc tgatatgaac tgttatcctt tgcctcagcc ttacatttca
     9721 tagcgataaa aaaatcatgc gtatgtcatg aaaatgttat ccgataacac aataggccaa
     9781 taatttaatt atatacctta atcatgtaag aaaaaagcga ttccgtctaa tttgtgaaat
     9841 tttcattaaa tgcatttgaa agaaattttg tacctatttt catttcaaac agctacatga
     9901 aatgaattac atattacatt cacaattcat taacactcca catttcagca gtgctataat
     9961 gaagaaaaag taactaatcg agggatgcgt catgaagtct atcacgtttt taatgcacaa
    10021 tatttttgct gttggcggta cagttaagac gattaccaac cttgccaatc aattggttca
    10081 ccaaggacat caagtcacga ttatttcaat tttcaaatcg aagcaacaac cgtatttcga
    10141 acttgattcc cgcgtcacag ttaagtcatt agttcattat caacttggct tacgaaatct
    10201 catcccactc gcagcaaatc gcattcgtaa gtttacacca ttgttaaaac ccaaatattt
    10261 aacacaatac gagcccggtt ttcgtcaata ttcgagttat attgaaaaaa agatgattcg
    10321 cgccatccaa aatgacacgt cagatatttt tgtcggtacg cgtgccagcc acaatcttct
    10381 cattgcacga tttgcaaaag gccatcaatt aactatcggg atggagcata tgaacttgga
    10441 tgcacatcgc caagagttga aagaagagtt attgacttat tatccacatc tcaatgcaat
    10501 aacgacttta actgaagccg ataaacagcg ctatacacaa tatttagatg caccgatttt
    10561 tgtcgttcca aatatgattg atgaaaagcg ccatcatatt atgaagaaaa accaaatcat
    10621 cgcagcaggt cgttttgaat atgaaaaagg atttgatctc cttattcaag ctgtttatga
    10681 aatccaagaa gatttgcgtg actttggtta tactgtatca atttttggag atggtagtga
    10741 gaaagaggca ttacaacaac agattaactt tttacgatta caagaccttg tctttttacg
    10801 accaacgaca caacatctca gcacgtatat tgcagaaagt aagattacat gtatcccctc
    10861 acgtaatgaa ggtttcggca tgacgatttt agaggcgatg aaccaaggca gtattgtcgt
    10921 aagttttgat gggaataccg gtccgaaatc actgattcaa catagccgta acggtttctt
    10981 agtgccgcat cttcaagcgt cagcactcgc catgcagctc ttagaaattg tggaatatgg
    11041 acattcaaaa tatttaaatc ctatcattca aagtggctat caaacagtgg aacagtatca
    11101 acctgaatcc atttataatc agtttaaaac agccatggat catgtaattg caacacaatc
    11161 atcatgactg attgaaaatg aggcttggag aacttaatga tctctcagcc tcatttttat
    11221 atgtattaag cgtagaatta tttgccatta cctcgtgaat catacgtaat caatgacgca
    11281 tgaggacaaa ttcactgcgc attgcatccc tcaagcattt ccccataccg ccacaaaaat
    11341 taagtatttg attttagaaa agagcggctt attatgtttt tccctcttcc aatgagatgt
    11401 acttaaccta gattgtaagc accatgcaag actcctgagg catcagctga aacgaaaaat
    11461 ccaattcggc ttccatcaca tgtacactta aatcaagccg aattttgttg gagtttcagc
    11521 gcttcagaaa gcgtagcacg gttcaagcaa ggcaagaatt tttcatctat ctaaaaaagc
    11581 acgcaaaaag gactgacata gccaacaaaa tcagccatat cagtccttca atcattaacc
    11641 taaaattaac gataaaataa acgtccaaat acaccagaat atcaataaac cgacactata
    11701 ttttaaagtc atcttcaaca actctgactc tctacctact tgttttacgg ctgcagtcgc
    11761 aatcgcaata gattgtggag aaatcaattt cgcaatcgca ccccctgcag tgttagcgcc
    11821 aacaagtaag gcaccacttg taccaacttg aggcgcaact gacgcttgaa ttggtgcgaa
    11881 taatgcgttg ttgttcgtaa ctgaacctgt cataaacacg ccaatccagc cgagaattgg
    11941 tgataagaat gggaaggcag ctccagtttt tgaaatacct tcacccatcg cgcttgttaa
    12001 accaccatat gttgtgactt tcgcaatggc taagatgaaa caaattgtta aaatcggtaa
    12061 ccataattct ttaaacgctt ctacaaacaa tgcaccggca cgtttgaagt tgacttttga
    12121 cgaaattaaa accgtaataa taccggcaat caataacgct gtacctgttt gatttaaaat
    12181 gttgaatgtt aacataatcg gatgacccga aatatcattc attgttcctg gaataccaaa
    12241 tttaacattc ataaatgata atgcgccatc ttccaaaaag aggcctttaa atgcttttga
    12301 gctccaaatt aatacaagaa ttgttaaaat aatgaatgga ctccatgcaa atacgacttc
    12361 tctgaaagaa tgatgtttga cttccatctt ttcttcgcca gcatttaaac ggaaaatatt
    12421 tttcggttgg aattttttag agaataatgc taatgcaccc attgaagcaa gtggtggaag
    12481 gatatccact aattcaggac cgaaaaattg gttaaagaag acttgtaata caacaaatgg
    12541 cacgactgtt acaataatcg ctggtaatgt ttctttaatc cctttaaatc cgtcgataat
    12601 aaagactaat aagaaaggta caatgacact taaaataggt aaacttaagt ttgtcgcttg
    12661 agcaacgtct aatgctgata cgtcaccttt taatgctaat gtatcgataa cagaaactgg
    12721 taaaccaata gcaccaaatg cacctgctgc accgttacct actaaacaaa gcattgcagc
    12781 ttgtaatggt ttaaatccaa gttgaatcag taataccgca cagattgcga ttggtacacc
    12841 gaatccagct acaccttcta aaaatgcgtt gaacgcaaaa ccaattaata acaattgaat
    12901 acgttggtct tcagaaattg tcgtaatact atcttgtaca atagcaaact gacctgtcgc
    12961 cactgtcact ttgtataacc atacggccat cataacgata aagccaattg gtaaaatacc
    13021 ttgatagaaa ccttctaaaa taccaccaga agcaatgcct actggtaatt taaatacaac
    13081 taatgcaatc acaagtgtga cgacgagtgt tgtaattgct gcataaatcc ctttcatttt
    13141 aaacactgtt aaacataaca agaataaaat gattggaata cttgcaacca atgcagaaat
    13201 tgcaagattg tgaaatggat caaaatgctc tactaacatc tcttttcatc taccttcaat
    13261 atttattttt tatgcgtcaa tctccatgag ggggcatgtg attgatttca cataaaatat
    13321 accacgtcaa tacaattaat tcaatagtgc ttgtgaataa tttcccaatg
//
LOCUS       DANHPA010000073        13190 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.073, whole genome shotgun sequence.
ACCESSION   DANHPA010000073 DANHPA010000000
VERSION     DANHPA010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 13190)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13190)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13190
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.073"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(76..1254)
                     /locus_tag="PTC28_001682"
     CDS             complement(76..1254)
                     /locus_tag="PTC28_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NarK/NasA family nitrate transporter"
                     /protein_id="HDK5716964.1"
                     /translation="MNQSKGGVQLALQTLSLVAGFMAWSIIAPLIPFISQDIKISSGQ
                     LSIILAIPVILGSVLRVPFGYLTNIVGAKWVFFTSFIVLLVPIFLLSQAGSPGALMFA
                     GFFLGVGGAIFSVGVTSLPKYFSKDKVGLANGIYGMGNLGTAVSSFLAPPIAGVIGWQ
                     NTVRSYLIVMAVFAIIMFFLGDNKEPKVKVPLVEQTRILMKNYKLYYLSLWYFITFGS
                     FVAFGLFLPNFLVQNFGIDKVDAGIRTGVFIALATCLRPLGGILGDKFNAVTMLKIFF
                     SIMIAGAFILGVSSQISLFTIGCLTVSVCAGIGNGLVFKLVPHYFTKEAGVANGIVSM
                     MGGLGGFFPPLVISAVTSITGTSHFAFILLCVFGLIALVTMFNLSKREKAAANKATVS
                     "
     gene            complement(2659..3309)
                     /gene="nreC"
                     /locus_tag="PTC28_001683"
     CDS             complement(2659..3309)
                     /gene="nreC"
                     /locus_tag="PTC28_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002464689.1"
                     /note="Involved in the regulation of the the nitrate
                     reductase operon narGHJI; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate respiration regulation response
                     regulator NreC"
                     /protein_id="HDK5716965.1"
                     /translation="MRIVIADDHAVVRTGFSMILNFQEDMEVVGTAADGVEAYQKVME
                     HAPDVLIMDLSMPPGESGLIATSKILDSFPNTKILILTMYDDEEYLFHVLRSGASGYI
                     LKNAPDEQLLLAIRTVYQGETYIDPKMTTSLVKEFVHSSNDGEYSNDPFKVLSKRELE
                     ILPLIAKGYGNKDIAEKLFVSVKTVEAHKTRIMDKLNLKSKPELVEYALKKKLLDF"
     gene            complement(3328..4362)
                     /locus_tag="PTC28_001684"
     CDS             complement(3328..4362)
                     /locus_tag="PTC28_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDK5716966.1"
                     /translation="MPQQQTELLNFLQAYYHQTSEMIIFIDAQGQVIDMNEAAKRVIS
                     SDNDMSGISTTICGRCEGYTNEHALRTCQNCFLQSSEIGDTTFQVFMKTTNNKIEPFT
                     ATYQTIDEERQIKAFTLQNVTAQLQRQEKLYQRNMIQKTIAAQENERKRISRELHDGV
                     VQELININVEMRLLKYQNDMDVLLSNAKNIEGLMTKLIDDLRNLSSELRPSTLDDLGL
                     DAAFKTYFKQIENNYGLAINYHFDIDSERFDAEIETVVYRIVQEAVFNAMKYADIDDV
                     DVIIRKDDHYLYAEVSDQGRGFEPSDSPKGTGLGLYGMYERAELVNGKLNIETQKGKG
                     TIVSLEVPIS"
     gene            complement(4362..4823)
                     /gene="nreA"
                     /locus_tag="PTC28_001685"
     CDS             complement(4362..4823)
                     /gene="nreA"
                     /locus_tag="PTC28_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate respiration regulation accessory nitrate
                     sensor NreA"
                     /protein_id="HDK5716967.1"
                     /translation="MNQIDFSQHDYQDEIDRLRHEYQFDFAGIALPSEDHVGMKIKWR
                     YVSGNLNERYRRIVLRNGHGIAGNVMKTGKPMIIPDTTDDAIQNTLFDYPILMSEQLT
                     ALIAIPLWHNHRVKGVLLLGQRNQKPLPHLAKDISSIKSVGSLTSEDKVMQ"
     gene            complement(4839..5516)
                     /gene="narI"
                     /locus_tag="PTC28_001686"
     CDS             complement(4839..5516)
                     /gene="narI"
                     /locus_tag="PTC28_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="respiratory nitrate reductase subunit gamma"
                     /protein_id="HDK5716968.1"
                     /translation="MFNQFLWVIFPYLCLAVFVIGHIARYRYDQFSWTAKSSEFIEKK
                     QLKWGSLLFHLGVIPVFFGHVVGLLIPAHWLEAVGVNNHIYHIGAVYIGSIFGIITLI
                     GMFLLTARRITKQNVRRLSSASDIFVNFLLLLIVFVGCYATLVTNATTPEFDYRQTIS
                     IWFRALFTLSPDANLMTEVPLAFQLHVLLGFTIMACWPFTRLVHVWSVPVTYASRSYI
                     IYRKHKI"
     gene            complement(5509..6084)
                     /locus_tag="PTC28_001687"
     CDS             complement(5509..6084)
                     /locus_tag="PTC28_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD family protein"
                     /protein_id="HDK5716969.1"
                     /translation="MINLHMLDTYKDTFGYMSQQLSFPEKLTFHPKTFEEVFDETHPA
                     YPHVVAYREAMYEKSLSEIQAFYTDTFDFNEKATLYMTYNQLDTQKERGQMLAKLKVL
                     YEMFGLEMPASELSDYLPLMLEFLYAARFDGDTRAQENVQLVIMIIEDGTYAMMKHLE
                     SEHNPYAHLIRGLRETFKHCIVQDKEVTHHV"
     gene            complement(6077..7633)
                     /gene="narH"
                     /locus_tag="PTC28_001688"
     CDS             complement(6077..7633)
                     /gene="narH"
                     /locus_tag="PTC28_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009384084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit beta"
                     /protein_id="HDK5716970.1"
                     /translation="MKIKAQVAMVLNLDKCIGCHTCSVTCKSTWTNRPGAEYMWFNNV
                     ETKPGIGYPKRWEDQETYKGGWVLNKKGKLELKSGTRLNKIALGKIFYNPDMPVIQDY
                     YEPWTYNYEHLTKAKPSQHTPVAKAHSVMTGQRMDLDWGPNWEDDLAGGHITGPQDPN
                     IQKIEEEIKFNFDQTFMMYLPRLCEHCLNPSCVASCPSGAMYKRDEDGIVLVDQEACR
                     GWRYCMTGCPYKKVYFNWKTNKAEKCTFCFPRVEAGIPTVCSETCTGRMRYLGVLLYD
                     ADRVQEAASAENEQDLYEKQLDLFLNPFDEAVIEQAEKDGISQEWIEAAQNSPIYKLA
                     IEYKLAFPLHPEYRTMPMVWYCPPLSPIMNYFEGQNAGNNPDAIFPAIEEMRLPIQYL
                     AELFTAGDTVAVKGSLQRMAMMRSYMRAQNTGREFDMSRLARVGLTERQAKDMYRLLA
                     IAKHEDRFVIPTSHKEQYMDTYTAQGSQGYGGEHFGANCDGCGVPVGTGGKTGQEMYN
                     ERFYGGIFRD"
     gene            complement(7623..11294)
                     /locus_tag="PTC28_001689"
     CDS             complement(7623..11294)
                     /locus_tag="PTC28_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit alpha"
                     /protein_id="HDK5716971.1"
                     /translation="MAKFGMQFFKPTEKFNGNWSVLEHKSREWEKMYRERWSHDKVVR
                     TTHGVNCTGSCSWKVFVKNGVITWENQQIDYPSCGPDMPEFEPRGCPRGASFSWYEYS
                     PLRIKYPYVRGKLWDLWTAALEEHQDPIKAWASIVEDEEKAKIYKSARGKGGHVRTNW
                     KDVSQLISAQLIYTIKKDGPDRIAGFTPIPAMSMISYAAGARFISLLGGEMLSFYDWY
                     ADLPPASPQIWGEQTDVPESSDWYNSSYIMMWGSNVPLTRTPDAHFMTEVRYKGAKVV
                     SVAPDYAENVKFADNWLAPNPGTDAAIAQAMTHVILQKFYEDEPSEMFINYAKQYSDM
                     PFILCLDQDDNGFKAGRFLRSSDLGQTSENSEWKPMIIDRLTDSLQVPNGTMGQRWEE
                     GKQWNLKLENEAGEKIDPAMTVIDGDYELITIQFPYFDNDGNGVFKRVIPARRVTLPN
                     GESTYVTTVYDLMASQYGVKRFNHELEAKGFDDATSFYTPAWQEKITGVKASMVTQVA
                     NEFAQNAIDTGGRSMIIMGAGINHWFNSDTIYRAILNLVILCGCQGVNGGGWAHYVGQ
                     EKCRPIEGWSTIAFAKDWQGPPRLQNGTSWFYFATDQWKYEESGVDRLASPLAENIKL
                     QHPADYNVLAARNGWLPSYPQFDRNSLLWGEEARDAGEFTNEAILKRAVDDVKSRRTR
                     FAVENPDLRKNHPKSLFVWRSNLISSSAKGQEYFMKHLLGTKSALMAEPNETDKPSEI
                     EWGEDTVGKLDLLVSLDFRMTATPLYSDIVLPAATWYEKHDISSTDMHPFIHPFNPAI
                     DPLWESRSDWDIFKTLSRTFSEMARVHLTGTYKDVVTAPLAHDSKQEISLAYGEVKDW
                     TKGEVEAVPGHTMPAFAVVDRTYTDVYDKFISVGPLLENGKVGAHGVSFSVKDQYDEL
                     RGMVGTWEDDTVKNNKPRIDTARKVADVILNVSSATNGRVSQKSYEDLEAQTGMSLKD
                     ISSERASEKISFLNITSQPREVIPTAVFPGSNKQGRRYSPFTTNIERLVPFRTLTGRQ
                     SFYIDHEVFQQFGEALPVYKPTLPPMVFGTKDKPVKGGVDALVLRYLTPHGKWNIHST
                     YQDNQHMLTLFRGGPTVWISNEDAAAHDIHDNDWLEVYNRNGVVTARAVVSHRMPRGT
                     MFMYHAQDKHIETPGSDISGTRGGSHNAPTRIHLKPTQLMGGYAQISYSFNYYGPIGN
                     QRDVYVAVRKMKEVDWLED"
     gene            12181..12561
                     /locus_tag="PTC28_001690"
     CDS             12181..12561
                     /locus_tag="PTC28_001690"
                     /inference="COORDINATES: protein motif:HMM:NF013483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HDK5716972.1"
                     /translation="MCQVLGVSRSGYYDWKNRKPSARIVKREGLKKQIYQIYIKKRYG
                     SPKITQILRRHGHTVTQRTVSRLMKELGIRSITKKKYKATTHSKHHLPIYPNLLNQQF
                     KVSQPGSVWVADITYLYTKEGGSI"
     gene            12570..13010
                     /locus_tag="PTC28_001691"
     CDS             12570..13010
                     /locus_tag="PTC28_001691"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HDK5716973.1"
                     /translation="MDLFSLRIIGWANAPRMTKELVMSALNKAYTIQEPKEELIHHSD
                     QGSQYASIEYQNLLREKGIQSNMSRKGNCYDNACIASFHSIIKKKLIYHQNYKIREEA
                     MFSIVAYLLTFYNSKRVHSTLNDMSPIEFEKKYATKPPSSECTF"
BASE COUNT         3986 a         2890 c         2340 g         3974 t
ORIGIN      
        1 aggactgaga aacatgacgt ctctcggtcc tctttttatt cataacaatg ctctactctg
       61 aatcacttgt cagtattatg acacagtcgc tttatttgcg gctgcttttt cacgtttaga
      121 taagttaaac atcgttacaa gtgcaattaa tccgaataca cataacaaga tgaatgcgaa
      181 atgactcgta cctgtgatag atgtcacagc tgaaatgaca agcggtggga agaatccgcc
      241 aagccccccc atcatagaaa caataccgtt tgcgacaccc gcttcttttg tgaaataatg
      301 tggcactaat ttaaacacaa gtccgttacc aataccggca caaacactca ctgttaaaca
      361 gccgattgta aacaatgaaa tttgactcga aacacctaag ataaaagcac ccgcaatcat
      421 aatagagaag aagattttca acatcgtcac cgcgttaaat ttatccccta aaataccgcc
      481 aagaggtctc aaacacgtcg ctaacgcgat aaacacacct gtacgaattc ctgcatcaac
      541 tttatcaata ccgaaatttt gtacgaggaa gttcggtaaa aataggccaa atgcgacaaa
      601 tgagccgaac gtaataaaat accataagct taaataatac agtttatagt ttttcattaa
      661 aatacgcgtt tgttctacaa gtggtacttt cactttaggt tctttattgt ctcctaaaaa
      721 gaacatgatg attgcaaaga ctgccatgac aattaaataa ctacgtacag tgttttgcca
      781 tccgatgaca cctgcaatcg gtggcgctaa aaatgaagat accgctgtcc ccaagttccc
      841 cataccataa ataccgtttg cgagaccgac tttatcttta gaaaaatatt tcggaagtga
      901 tgtaacacct actgagaaaa tcgcgccccc gaccccaagg aagaatcctg caaacattaa
      961 cgcgccagga gagccagctt gactgagtaa aaatatcggt acgagcaaca caataaagct
     1021 cgtaaaaaac acccatttcg cgcctacaat atttgttaaa taaccaaatg gtacacgcag
     1081 aacagatcct agaataacgg gaatggccaa aataatagag agttgaccgc ttgaaatttt
     1141 aatatcttgt gaaataaatg gaattaatgg tgcaatgata ctccacgcca taaaccctgc
     1201 aacaaggctg agtgtttgga gcgcaagttg tacgccacct ttcgattgat tcatttctca
     1261 ttcacctttc tttactagat gcatcaactt gaacgttagc ttcagttcaa ataagatgcg
     1321 cgattagatt tcacctctag tttaacgata ttgtgaaatt tataacataa ggagttaccc
     1381 tattattaca tagcgtatcc cctaacaatc gaaagtgata gtgtccgctt acacatttga
     1441 catgtgctct attccattta tataaccaat atacttctct aatgtattaa acttttgaac
     1501 aaattagatt tttgtattga tgcgttctga tccatcatcg ctcattaata tcctattatt
     1561 tgtatcatcg ttggtcgtaa taccttgttt attttgaaga tcaaatagtt ctgctaacaa
     1621 ccgtgcacca cgttcttttg tagtttcaat tttgaaagac cattgatacg cttcaagtgg
     1681 cttaaatcat ttatctttac ctacaatgtc taaataaaag acatcaaact tctcacagat
     1741 tcgatttatt aaccctgtcg taattgaact cgtcccattt gcataacagc ttaatctatt
     1801 acaagaaata tcaatcctaa ttacaagtaa aatttcaact tcaattaaaa agagcaagtg
     1861 catggagatg tctgaattcc caataccttg ctcgatagtc tataaaaatt catttgagag
     1921 taagcgtcta gttcactccc cctacattct cactacctcc ctctcattaa aaaagaaaag
     1981 ttgcgagaag cagtagataa aagtgtatca acaacccgct caaaattaaa agttgaggat
     2041 gacacaaaat atcgtgtaac atcctcaact cgaaatgttt ataaatatca attgcacacc
     2101 taggcgagac tcctgaggga tcagctggcc cggaaaatcc atcaacgctt ccactacaaa
     2161 tataacagta aaatgaaagc gttgattagt tgtagggaca gcccctagga acgcgagccc
     2221 aaggtagcaa tcatgcaaca tacgcctgta acagaaaatg ttttaacaca tgccctttca
     2281 cgtcatcttc tcatctcaat aaaaatgata agttatttga agtatgtgcg taagaatatc
     2341 ttgttagttt tttaaatgac atctttcaaa ataaaagttg aggatgacac aaaatatcgt
     2401 gtaacatcct caactcgaaa tgtttataaa tatcaattgc acacctgggc gagactcctg
     2461 agggatcagc tggcccggaa aatccatcaa cgcttccatt acaaatataa cagttaaatg
     2521 aaagcgttga ttagttgtag gggcagcccc taggaacgcg agcccaaggt agcaatcatg
     2581 caacatacac ctataacaga aaatgtttta actcccgcta cgttccctca attttaaaat
     2641 gagcaacatg ttaaaccact aaaaatccaa caacttcttc ttcaacgcat actccactaa
     2701 ctccggcttc gacttcaaat tcaacttatc cataatacgc gttttatgtg cctcaaccgt
     2761 cttcaccgac acaaacaatt tctcagcaat atccttattc ccataacctt tcgcaatcaa
     2821 tggtaaaatc tccaattccc gcttcgacaa tactttaaac ggatcattcg aatactcacc
     2881 gtcatttgat gaatgcacaa actctttcac taaagaagtc gtcattttcg gatcaatata
     2941 cgtctcgcct tggtaaacag tccgaatcgc taacaataat tgttcatccg gcgcattttt
     3001 caaaatatag ccactcgcgc cacttcttaa tacgtgaaat aaatattctt catcatcata
     3061 catcgtgagt atgagaattt ttgtatttgg gaaactatct aaaattttac tcgtcgcaat
     3121 taaacccgat tctcctggtg gcatacttaa atccataatc aatacatctg gtgcgtgctc
     3181 catcactttt tgatacgctt caacaccatc tgcagcggta cccaccactt ccatatcttc
     3241 ttgaaagttt aaaatcatcg aaaaacccgt acgtacaaca gcgtgatcat ctgctatcac
     3301 gattctcatg ctacattccc ctcactttta gctgattggt acttcgagtg acacaatcgt
     3361 accctttcct ttttgcgttt caatattgag ttttccattc accagttctg cacgttcata
     3421 catgccataa agccctaaac cggttccttt aggcgaatca ctcggttcaa atcctctccc
     3481 ttgatctgaa acttccgcat aaaggtagtg atcatctttg cgaataatga catcaacatc
     3541 atcaatatcc gcatacttca tcgcattgaa aaccgcttct tgcacgatac gatagacgac
     3601 agtttcaatt tccgcatcaa agcgctccga gtcaatatca aaatgataat tgatcgctag
     3661 gccgtagtta ttttctatct gtttaaaata tgttttaaat gcggcatcta gtcctaaatc
     3721 atctaatgta gacggacgta attctgatga taaattgcgc aggtcatcaa tcaattttgt
     3781 catcaagcct tcaatatttt tggcattaga taggaggaca tccatatcgt tttgatattt
     3841 taataagcgc atttccacat tgatgttgat cagttcttga acgaccccat catgcaattc
     3901 acgcgaaatc cgtttacgtt cgttctcttg tgctgcaatc gttttttgga tcatattacg
     3961 ttgatatagc ttttcttgtc gctgcagttg tgctgtgaca ttttgaaggg taaaggcttt
     4021 aatttgtcgt tcttcatcga tcgtttgata ggtcgctgta aatggctcaa ttttattatt
     4081 ggtcgttttc ataaagactt gaaatgtcgt atcaccaatt tcagaagact gcaaaaaaca
     4141 attttgacat gtgcgtaagg cgtgttcgtt cgtataccct tcacatctgc cacatatcgt
     4201 cgtcgaaatc ccactcatat cattatccga tgaaatgacg cgttttgccg cttcattcat
     4261 atcaatgact tgaccttgtg catcgataaa aataatcatt tctgatgttt gatgatagta
     4321 tgcttgtaaa aaatttaata attcggtctg ttgttgtggc attattgcat caccttatct
     4381 tcactcgtca aactaccaac actcttaatg gaggaaatgt ctttcgctag atgtggcaat
     4441 ggcttttgat tacgctgtcc gagcaaaagg acacctttca cacgatggtt gtgccacagt
     4501 ggaatcgcaa tcaaagccgt caattgctca ctcatcaata taggataatc aaacaatgta
     4561 ttttgaattg catcatctgt tgtatccgga atgatcatcg gcttgcctgt tttcatcaca
     4621 ttccctgcaa taccatgtcc attacgtaac acaatgcgac gatatcgttc attcaagttg
     4681 cctgacacgt aacgccattt gattttcatc cccacatgat cttctgatgg caaagcaata
     4741 ccggcaaagt caaactggta ttcatgacgt aatctatcta tttcatcttg ataatcatgt
     4801 tgcgaaaaat caatctggtt cacggtcatc accttccatt aaattttatg tttgcgataa
     4861 ataatataac tacgacttgc ataagtcacc ggcacactcc acacgtgaac gagacgcgta
     4921 aacggccagc aagccataat cgtaaagcct aaaagaacgt gcaattggaa tgcaagcggc
     4981 acctctgtca tcaaattagc atctggactg agcgtaaaca atgctctaaa ccaaatcgaa
     5041 atcgtttgac ggtaatcaaa ctctggcgtt gtcgcattcg tcactaaagt cgcataacag
     5101 ccgacaaata cgataagtaa taataaaaag ttaacgaaaa tatctgacgc cgaacttaaa
     5161 cgacgaacat tttgtttcgt aatacgacgc gctgttaaca aaaacatacc aattaacgtt
     5221 attataccaa aaatgcttcc aatatacact gcaccgatat gatagatatg gttattcaca
     5281 ccaactgctt ccaaccaatg tgcagggata agtaacccaa cgacatgtcc gaaaaacaca
     5341 ggaataacgc caagatgaaa caacaaactg ccccacttta attgcttctt ctcaataaat
     5401 tcactcgatt ttgcagtcca tgaaaattgg tcataacgat aacgtgcgat gtgcccaata
     5461 acaaaaactg caagacagag gtacggaaaa atcacccata aaaattgatt aaacatgatg
     5521 tgtcacctct ttatcttgaa cgatacaatg cttgaacgtt tcacgaagac cacgaattaa
     5581 atgtgcatat ggattgtgct cactttccaa atgtttcatc atcgcgtacg tcccatcttc
     5641 aataatcatg atcacgagtt gtacattttc ttgcgcacgt gtatcaccat caaagcgtgc
     5701 cgcatataag aattccaaca tgagcggcaa gtaatccgac aactctgaag ctggcatttc
     5761 aagcccaaac atttcataaa gaacttttaa cttcgccaac atttgaccgc gttctttttg
     5821 tgtatccagt tgattgtatg tcatatacaa agtggctttt tcattaaaat caaacgtgtc
     5881 tgtgtaaaaa gcttgtattt ccgacaaact cttttcatac attgcttctc gatacgccac
     5941 gacatgcggg taagctggat gtgtctcatc aaacacttct tcaaatgttt tagggtggaa
     6001 ggtcaatttt tcaggaaagc tcaactgctg actcatataa ccgaatgtat ctttatacgt
     6061 atccaacatg tgtagattaa tcacggaaaa tccctccata gaaacgctcg ttatacattt
     6121 cttgacccgt ttttccacct gttccgactg gtacaccgca accgtcacag ttcgcaccaa
     6181 agtgttctcc cccataacct tgactgcctt gtgctgtgta cgtatccata tattgctctt
     6241 tatgcgaagt tggaatgaca aaacgatctt catgtttagc aatagcaagt aaacgataca
     6301 tatccttcgc ttgtcgctcc gttaaaccta cacgcgctaa acgggacata tcaaattctc
     6361 gtcctgtatt ttgtgcacgc atgtaacttc tcatcatcgc catacgctga agtgagccct
     6421 tcaccgctac cgtgtctcca gctgtaaaga gttctgctaa atattgaatt ggtaaacgca
     6481 tctcttcaat tgctgggaat atcgcatctg ggttgttacc tgcattttgt ccttcaaagt
     6541 agttcataat cggacttaat ggtggacagt accataccat tggcatcgta cgatattctg
     6601 gatgcaatgg gaatgccaat ttatactcaa ttgctaattt ataaattggt gaattttgtg
     6661 ccgcttcaat ccattcttga gaaatgccgt ctttttctgc ttgttcaatg actgcttcat
     6721 caaatggatt taaaaacaag tcgagctgct tttcatacaa gtcttgttcg ttttcagctg
     6781 atgccgcttc ttgcacgcgg tccgcatcat acagcaacac acctaaataa cgcatacggc
     6841 ctgtacatgt ctctgaacat actgtcggaa tccctgcttc aacacgtggg aaacagaatg
     6901 tacatttttc cgctttgttc gttttccagt tgaagtatac ttttttgtac ggacaacctg
     6961 tcatacagta acgccaacca cgacatgctt cttggtctac aaggacgatg ccatcttcgt
     7021 cacgtttgta cattgcacca gacggacatg atgccacaca gcttgggttt aaacagtgtt
     7081 cacatagacg cggtaaatac atcataaatg tttggtcaaa gttgaatttg atttcttctt
     7141 caattttttg aatgttaggg tcttgcgggc cagtaatatg accgccggct aagtcgtctt
     7201 cccagtttgg accccaatcc aaatccatac gttgccctgt catcacggaa tgtgctttgg
     7261 ctacaggtgt atgttggctt ggtttcgctt ttgtcagatg ttcgtagttg tatgtccaag
     7321 gctcataata atcttgaatg actggcatat ccggattgta gaagatttta cctaatgcaa
     7381 ttttgtttaa acgtgtccct gatttcagct ctaatttccc ttttttgttt aagacccatc
     7441 cgcctttata tgtttcttgg tcttcccaac gttttgggta accaataccc ggtttcgttt
     7501 cgacgttatt gaaccacata tattcagcgc ctggtcgatt ggtccaagta cttttacatg
     7561 tcacactaca agtatgacag ccgatacatt tatctaaatt caataccatt gcgacttgtg
     7621 ctttaatctt caagccaatc cacctctttc atctttctta cagcgacata cacatcacgc
     7681 tgattcccaa ttggtccata gtaattaaat gaataactga tttgtgcata accgcccatt
     7741 aactgtgtcg gttttaaatg aattcgagtc ggcgcattat gagagccacc acgtgtacct
     7801 gaaatgtctg atccaggtgt ttcgatatgt ttatcttgcg cgtgatacat aaacattgtt
     7861 cctcgtggca tacggtgtga cacgacagca cgtgcagtta cgacaccatt tcggttgtaa
     7921 acttctaacc aatcattgtc gtggatatca tgtgctgctg catcttcatt cgaaatccaa
     7981 acagtgggtc caccacggaa taatgtcaac atatgttggt tatcttgata tgtggagtga
     8041 atattccatt ttccgtgtgg tgttaaatag cgtaatacaa gtgcatccac gccacctttc
     8101 actggtttat cttttgtacc gaagaccatt ggtggtaatg tcggtttata gactggcagt
     8161 gcttcaccaa attgttggaa cacttcatgg tcgatgtaga aactttgacg tcccgttaac
     8221 gttctaaatg gtacaagtcg ttcaatattc gttgtaaatg gtgaatagcg acggccttgt
     8281 ttgtttgaac ctgggaacac cgctgtcggt atgacttcac gcggttgtga tgtaatgttc
     8341 aagaacgata ttttttccga tgcacgttca gatgaaatgt ctttcaatga cattcctgtt
     8401 tgtgcttcca aatcttcata tgacttttga gatacacgac catttgtagc agaagacacg
     8461 ttcaaaataa catccgctac tttacgtgct gtatcgatac gcggtttatt atttttcact
     8521 gtatcgtctt cccaagtacc gaccataccg cgcaattcat catattggtc tttgacagag
     8581 aagctgacac catgcgcgcc gactttaccg ttttcaagta gtgggccaac tgagatgaac
     8641 ttgtcataca catctgtata cgtccgatca acgactgcaa atgctggcat tgtatgacct
     8701 ggtacagctt ccacttcacc tttagtccag tctttcactt caccataagc gagtgaaatt
     8761 tcttgtttag aatcgtgtgc aagtggtgca gtgaccacgt ctttataagt gcctgttaaa
     8821 tggacacgtg ccatctctga gaatgtacgg ctcaacgttt tgaaaatatc ccagtctgag
     8881 cgtgattccc ataatggatc aatcgctggg ttgaaaggat gaatgaatgg atgcatgtct
     8941 gttgatgaaa tgtcatgttt ttcataccac gttgctgccg gtaatacgat atctgaataa
     9001 agtggtgtcg ctgtcatacg gaaatctaat gacacgagta agtcgagttt tccgactgta
     9061 tcttcccccc actcaatttc tgatggcttg tctgtttcat tcggctcagc cataagtgcc
     9121 gatttggtgc cgagtaaatg cttcataaaa tactcttgac ctttagcaga acttgaaatt
     9181 aaatttgaac gccatacgaa aagtgacttc ggatgatttt tacgtaaatc tggattttca
     9241 accgcaaaac gtgtacggcg tgatttcaca tcgtcaaccg cacgtttcaa aatggcttca
     9301 ttcgtaaact cacccgcatc acgcgcttct tcaccccaca ataaactgtt gcggtcaaat
     9361 tgtggataag atggcaacca accattacgt gccgctaaaa cgttgtagtc tgctgggtgt
     9421 tgcagtttaa tattttccgc taatggtgac gctaatcggt caacacctga ctcttcgtat
     9481 ttccattgat ctgtcgcaaa atagaaccaa cttgttccgt tttgtaaacg tggtggacct
     9541 tgccaatctt tcgcgaaggc aatcgtactc caaccttcaa tcggacgaca tttttcttgc
     9601 ccaacatagt gcgcccaacc gccaccattc acaccttggc aaccacataa aatgactaag
     9661 tttaaaatgg cgcgatagat tgtatctgag ttgaaccagt gattgatacc cgcacccata
     9721 ataatcattg agcgaccgcc tgtatcaatc gcattttgtg caaattcgtt cgctacttgc
     9781 gtcaccatgc tcgctttcac gcctgtaatc ttttcttgcc acgctggtgt gtaaaacgac
     9841 gtcgcatcat caaaaccctt tgcttctaac tcatgattga aacgtttcac accgtattga
     9901 ctcgccatca agtcgtatac agttgtcaca tatgttgatt caccatttgg caatgtcaca
     9961 cgacgtgcag gaatgacacg tttgaagaca ccattgccat cattatcaaa gtaaggaaac
    10021 tgtatcgtaa tcaattcata gtcaccgtca atgactgtca tcgctggatc aatcttctcg
    10081 cccgcttcat tttctaactt caaattccac tgtttgcctt cttcccaacg ttgccccatt
    10141 gttccatttg gcacttgtag tgaatctgtt aaacggtcga taatcatcgg cttccattca
    10201 ctgttttcag atgtttgtcc taaatcactt gaacgtaaga agcgacctgc tttaaaacca
    10261 ttgtcatctt gatcgagaca taggataaat ggcatatctg agtattgttt cgcataattg
    10321 atgaacattt ctgacggctc atcttcataa aacttttgta aaatgacatg tgtcatcgct
    10381 tgtgcaatcg ccgcatccgt tcctggattt ggtgctaacc aattgtccgc aaacttcaca
    10441 ttttcagcgt aatccggcgc aacagacacc acttttgccc ctttataacg cacttctgtc
    10501 ataaagtgtg catccggcgt acgtgtaagt ggtacgttag agccccacat cataatataa
    10561 gatgaattgt accaatcact tgattccggt acgtctgttt gttcacccca aatttgtggc
    10621 gacgctggtg gtaaatccgc ataccaatca tagaaactca acatttcccc accgagtaac
    10681 gaaataaaac gcgcacccgc cgcataactg atcatcgaca tcgctggaat tggcgtgaaa
    10741 ccagcaatac ggtctggacc atctttttta atcgtgtaaa tgagctgtgc tgaaatgagt
    10801 tgagacacat ctttccaatt cgtgcggaca tgtccccctt taccacgagc tgacttataa
    10861 atttttgctt tttcttcatc ttctacaatg gatgcccatg ctttaatcgg atcttgatgt
    10921 tcctctaaag ctgccgtcca taaatcccaa agcttgcctc tcacataagg atatttaata
    10981 cgtaacgggc tatattcata ccaagaaaac gacgccccac gcggacagcc acgcggttca
    11041 aactccggca tatccggccc acaactcgga tagtcgattt gttgattttc ccaagtaatt
    11101 acaccgtttt tcacaaacac cttccacgag catgaccccg tacagttgac gccatgtgtc
    11161 gtacgaacga ctttgtcatg actccatcgt tcacgataca tcttttccca ttcacggctt
    11221 ttatgttcta atactgacca attgccatta aatttttcag tcggtttaaa aaattgcatt
    11281 ccaaatttag ccatagatat cctccttttt cgcatagcac gccctatcac tctgattgta
    11341 catttattca caaaacgaag atattaggga attgcctaat tcactagtgg gaatccctag
    11401 tgttcgttgt aaattaaaat gaaaaatagg gaaatgataa cgtaggaggt tatgaatcaa
    11461 aatatatttc ggatttttct gtcaattatg aaatttaatc tttataatta gtctatgaca
    11521 taaaaaaagg ggctaaaatt atgaataaag taaaagaatt accaattgaa gtcttggaaa
    11581 atttagaatc atgtgcatgt ggacaaaaaa taggaagtgg taacggaaat taaaaagggc
    11641 agttgttcct ttttaatttt accttatttg gagggatttt atgtttatag ctgaagattt
    11701 attatttatc accgttgata aaaagtattt aatttatagc ggctcatatc ataaagggtt
    11761 atgatgctag actaagaaac ggacacggta aattgataag aatttaatgt ataataaaag
    11821 aaatcaattt ataggagtgt aagtgatggc gagaagaaaa tacaatcata gctttaaagt
    11881 ggaagcaatt caatgagtag aatcagggag acgtgccaca gaagtttcta gaggtttaga
    11941 tattcctatt caaacgttaa caagatggct gagtatatat cgtaaagaca gtgaaaaagg
    12001 ctttgtcggt agcggtaaac gtacgacaaa gaatcaaaca gaagctgatt taaagaagcg
    12061 attaagagat ttagaagaag agaataaaac cttaaaaaag gctatgtaca tctttgccaa
    12121 agaccagaag tcatatacaa gtttatctat gaacaccgac atgaatttcg tgtcgtaaag
    12181 atgtgccaag ttctaggtgt ttcgagaagt ggttattatg attggaaaaa tcgtaagcca
    12241 agtgcacgca tagtgaagcg tgaaggtttg aagaagcaga tttatcaaat ctatattaaa
    12301 aaacgatacg gaagtcccaa aattacacaa atactaagac gtcacggaca tactgtaact
    12361 caaagaactg tcagtagatt gatgaaggag ctcggtataa ggtctatcac aaaaaagaaa
    12421 tacaaggcaa cgacccattc aaagcatcat cttcctatat accccaattt attgaaccag
    12481 cagtttaaag tatcgcaacc tggcagtgtt tgggtggctg acatcacgta tctatacacg
    12541 aaagaaggcg gctctattta gcaactgtta tggatttgtt ttctcttaga attattggtt
    12601 gggcgaatgc acctcgtatg acaaaagaac ttgtgatgtc agctttaaac aaagcgtata
    12661 caattcaaga acctaaagag gagttaatcc atcactcaga tcaaggaagt caatatgcct
    12721 caatagaata tcaaaattta ctacgtgaaa aagggattca gagcaacatg agtcgtaaag
    12781 gaaactgtta cgacaacgca tgtatagcat cttttcatag tattatcaaa aagaaattga
    12841 tatatcatca gaactataaa atcagggaag aagcaatgtt tagcattgtg gcgtatctcc
    12901 ttacttttta taattctaaa cgagtgcatt caacgttaaa tgatatgagc cccattgaat
    12961 ttgagaagaa atacgcaaca aaaccaccta gctcagaatg tactttttga tttttaaaag
    13021 tacattctga gctaggcaag caagcgaagc gcggtagaat tctctttttt ctgtgtccgt
    13081 attcttgaca tagatccaaa aatgcttcac tgataatatt aatgtaatta tattttaaat
    13141 taatatatct atatttcttt cactaaactt atacctagta actccatgga
//
LOCUS       DANHPA010000074        12936 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.074, whole genome shotgun sequence.
ACCESSION   DANHPA010000074 DANHPA010000000
VERSION     DANHPA010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 12936)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12936)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12936
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.074"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            266..1429
                     /locus_tag="PTC28_001692"
                     /pseudo
     CDS             266..1429
                     /locus_tag="PTC28_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000842036.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="triacylglycerol lipase"
     gene            2357..4444
                     /locus_tag="PTC28_001693"
     CDS             2357..4444
                     /locus_tag="PTC28_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612947.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HDK5716974.1"
                     /translation="MKDQKQLFSIRKFNSGASSVVIASLFFIGLSHAPALADTESTAH
                     SSEQKSTVQATNQEAPATKDATQAKSTAETNHAQEDTPASPQAKEASTPTSEKTTKDT
                     SVMSSTKTPSAQQSTETKDLHTDKMQDDTASETDQASSKSVAEAPKETADLKETSEQS
                     PSTAETVIDSDAQVDNDAQKDVLNTVQTSENSAQQTEETLSKNEPTHSQKAHLPSDEN
                     RVPTTIDLSADETHQRQELTEQSDNNTKTFNARVAPRAVTTKSVDKNTLVNTKAPKPT
                     KDDMKTLTTANVATTQPQNQQRQAEQVKSQADKKAKQGFYKNNDPIILVHGFNGFTDN
                     INPSVLSHYWGGEKLNIRQDLEENGYNTYEASISAFGSNYDRAVELYYYIKGGTVDYG
                     AAHAAKYGHSRYGKTYEGVYKDWKPGQKVHLVGHSMGGQTIRQLEALLRNGNPEEIAY
                     QKEHGGDISPLFTGNNDNMVSSITTLGTPHNGTHASDQLGNEPIVRQIVFDVAQVLAK
                     NKARVDFGLNQWGLQRKEGESLDDYFNRVANNDQLWRTEDNGFYDLTREGASKLNKKT
                     SLNPNIVYKTYTGEATHPSLSGKQKADYNLFFPFTLTANIIGKAAEKEWRENDGLVSV
                     VSSQHPYNQAWIDATDEVKKGVWQVMPVQHGWDHVDFVGQDTNDTAHSQDELKAFWHK
                     LAEDLVKSEDQTA"
     gene            complement(5287..6462)
                     /locus_tag="PTC28_001694"
     CDS             complement(5287..6462)
                     /locus_tag="PTC28_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5716975.1"
                     /translation="MAYIANILHVSLRSIMKNKRRNIFTMIGIIIGIAAVITIMSLGN
                     GFKKTADEQFSDAGASKDSALVSFLPNNFDTVKEPPFTTEDIEVARQVEGVQDASIKE
                     DDTFGLTAEARTVKKKADVAVVKSETVTEPDEGEGFSKEDNALKQRVATVSSEVAETL
                     FKGDAVGQTLYIDDIGFEVVGVKEKAQVPNAVQIPTKTVEADLPNLKSDYPQLMLKVG
                     EDADKKEIATKVADQLNQRGSAVAQGSYEYADTEALMKSIGKIFDSITYFVAAVAGIS
                     LFIAGIGVMNVMYISVAERTEEIAIRRAFGAKARDIEFQFLIESVVLCLIGGIIGLVI
                     GILIAKLVDVVTPEYIQSAVSLGSIILAVGVSTLIGIVFGWIPARAAAKKELIDIIK"
     gene            complement(6446..7141)
                     /locus_tag="PTC28_001695"
     CDS             complement(6446..7141)
                     /locus_tag="PTC28_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5716976.1"
                     /translation="MIELKGINRHFKNGNETNHILKDIELRIEQGEFVAIMGPSGSGK
                     STLINILGFIDRGYEGDYLFNGENYQKTSDNELAAIRNRTVGFVFQNFKLIQNNTILE
                     NVSVPLLYAGMRPAERNRRVLDILHRVGLYDKENLVPNKLSGGQQQRVAIARAIVNRP
                     RFIIADEPTGALDSKTSEDIMALFMELNQEQGTTMIVVTHDPKVAAQADRVIHILDGR
                     VQREEVLSHGVHR"
     gene            complement(7138..8181)
                     /locus_tag="PTC28_001696"
                     /pseudo
     CDS             complement(7138..8181)
                     /locus_tag="PTC28_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729651.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
     gene            complement(8289..8930)
                     /locus_tag="PTC28_001697"
     CDS             complement(8289..8930)
                     /locus_tag="PTC28_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716977.1"
                     /translation="MVKTNLPLFQHFEDLRNHPTWKVKAILMMVVTLIHAFLLKIDTD
                     NTTLLEGFGYSKEDIEEFHQIHWFADTMSSLMGVLISFLFTFVVFMMFSKLLHSDVSA
                     QTILSASFSHSLIVTSVALVFVCIQLIFHLPFPTYNITSLNIFLPGNMYLAAFDVQTI
                     FKGYVTFIVYYATSRLSLRAALTLGLLTIALTILLALGSAALEDTILSLAGEL"
     gene            9108..9710
                     /locus_tag="PTC28_001698"
     CDS             9108..9710
                     /locus_tag="PTC28_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5716978.1"
                     /translation="MVFSKPLYIEAFNSDRTQPHLWKKVLLLIFFIIIQTALTTLSVD
                     YIKLLTEQGLTEAQAQQSAPVAIVFGIIAAVITSLVVVGITYLITLLIYKIFKKVLMK
                     RAIFGAVLRYYNTILAVMSIILIIQLLFQLDITTVKIDSLNIFAPGNTLLGAFSLTNL
                     LSGWLFGVMLHSNGHLPAKWSWLLGIAVFILSVVFTAIVA"
     gene            complement(9769..10221)
                     /locus_tag="PTC28_001699"
     CDS             complement(9769..10221)
                     /locus_tag="PTC28_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1648 domain-containing protein"
                     /protein_id="HDK5716979.1"
                     /translation="MKQINRCIPILWLVSIVTLALFYTQLPAQVGTHLNFNGDVDGWG
                     AKSQLWIIPVIFLVIWFFLSLLLLYTPVWERTIQGATVEKSRSQRRDVLHTLVIVQLT
                     VWVLYMVYLIGTINGKEGIPFWLMWLAYLAIGLTLVTRIVHVFKRNQA"
     gene            complement(10208..11071)
                     /locus_tag="PTC28_001700"
     CDS             complement(10208..11071)
                     /locus_tag="PTC28_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructosamine kinase family protein"
                     /protein_id="HDK5716980.1"
                     /translation="MNEKWYHTLPLDDIQSIEPVSGGDVNQAFRINTNESPYFLLIQP
                     GREASFFDAEVAGLEAFEAAGVTAPKVIDQGQVDQDAYLLLSYLDEGQSGSQKALGKL
                     VAQLHQTHEREGRFGFHLPYEGGDIQFDNTWADDWQTLFLKQRMDPLAEVIRQRQLWS
                     DSDDALFEKVYGLMADTLAQHESLPSLLHGDLWAGNYMFLTDGRPALFDPAPLYGDRE
                     FDLGATKVFGGFSPAFYEAYDTAYPLAEGATLRIRFYELYLLLVHLVKFGTMYLGSVR
                     TTMEEIVDEAN"
     gene            11184..11846
                     /locus_tag="PTC28_001701"
     CDS             11184..11846
                     /locus_tag="PTC28_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDK5716981.1"
                     /translation="MEDKRQMLLDTFNYRFATKRFDASRKIDDADFDTILETGRLSPS
                     SLGLEPWKFLVIQDPEMREALKSISWGAQGQLDTASHFVLILARKNVRPENEYFQKLL
                     RDVKQLDTDMIEQMSEKTSAFQNDNLHLYESERALWDWASKQTYIVLGNMMTSAAFLG
                     IDSCPIEGFQYDEVSRILTEKGYFDDAEYAPSVMVAFGYREEDPKRAKTRRSKEEVID
                     WV"
BASE COUNT         4169 a         2784 c         2211 g         3772 t
ORIGIN      
        1 taaacgcggt gtctcatcag tcgttatcgc atctttgttt ttcacaacct tatccatcac
       61 acccgcttta gccaattcag aaacgatgca tccttcttct aaaaaagcac aagaaacagc
      121 gcgatcttca gtaaataata catcatatga cacattacgc tccaaaacaa caagcaatgt
      181 acaaacgttc aattctgaaa ataaaacgcc atcccaggta caaaatcaaa acatcaccac
      241 tcaacaagtc aaaacacaag acggtcaaaa agccaaacaa aacttttaca aaaacagaga
      301 cccgattgtt ttagtccatg ggtttaatgg atttacagat aatttactcc catcggttta
      361 tccacattat tggggtggag aaaaactgaa tattaggcaa gatttagaag aaaatggcta
      421 caacacatat gaagccagtg tgagtgcatt tggtagtaac catgaccgcg ccgttgaact
      481 ttattactat atcaaaggtg gtactgtcga ttatggtgca gctcatgcag cgaaatatgg
      541 acactcccgt tatggcaaaa catatgaagg tatcgacaaa gattggaaac ctggtaaaaa
      601 aattcactta gtcggccata gtatgggtgg acagaccatc cgccaacttg aagaatattt
      661 gcgtaatgga gacccagaag aaattgctta tcaaaaaaag catggaggta aaatatctcc
      721 agtcttcaaa ggcggtcacg atggtatgat ttcatcgatt acaacattag gtacaccgca
      781 taacggttca catgcctcag acaaactcgg taacgaagca attgtacgtc aaatcgtatt
      841 tgatgccgca caatatcttg ctaaaaataa agggcgcgta gactttggat taaaacaatg
      901 gggtcttgag cgtaaagaag gagaatcact cgatgcttat tttgagcgca ttttgaataa
      961 cgatcagtta tggcgtacag aggatcaagg tttctatgac ctcacactag aaggttcagc
     1021 aaaattgaac aaaaagacat cattgaaccc caatattgtt tacaaaacgt acacaggtga
     1081 agcgacacat ccaacacttt caggcaaaca aaaagcggac tacgacatgt tcttcttatt
     1141 aacattgaca gccaatgtta tcggtaaaac tgctgaaaaa gattggcgcg tcaatgatgg
     1201 tgtcgtctct gttgtttctt ctcaacatcc atacaaccaa gcctgggtgg aggcaacaga
     1261 tgaaatacaa aaaggtgttt ggcaagtcat gcctgtacaa gaaggttggg accatttaga
     1321 ctttatcggc ctagatacga atgatacgtc acgatcacaa gatgaattaa aaaatttttg
     1381 gcatagtatt gctgaagatc tcgttaagtc agaagaaaca acaaaataag gaggtggtgt
     1441 agatggcagg aacaccttta gaacttttac tttcaatttt taaattatta agaaatattt
     1501 tcaaatttta atgtaattga tgcaatattt tgttaaactt gccctcccta cgattttcgg
     1561 tttttgattg ccatcatggc ttccctttcc taggagctgg cccttcaact caattcggct
     1621 tgattgaagc atacatgaga tgggagccga attggatttt gggagcagta caggaatcac
     1681 atgtgtaaca aagatttcgt cgtactgccc cgcaaggctg actagacttc tcaaaagcat
     1741 gcgcattgag aagtcagaca gctactgcgt taaatggtag ccacttttaa agttaaatga
     1801 cgttgtttag cctttagctg atccctcagg agtctcagcc ttctgggcaa tcttatatcg
     1861 aattcagaga actgagggca agtttttgaa acctagcaaa acaatagcat caatttttta
     1921 cctcattcac tctagttttc caactgcttt aaaatcaatt aacccatcaa aaacctatgc
     1981 atggattgag gctgggggag catatcatca tatcccagcc ctctcttttt gttatgctca
     2041 aaaaatttta gacttcatat tgaacgtcaa aattaacgcc acattcctct tcaaattcat
     2101 gtctcagagc atttaaagta ataaaataaa aaatcaaatt ttgaattaat cgttttgaca
     2161 tttttttaaa attactgtat ccttacacca aattaatgaa aaccttttca aattatattt
     2221 tcggtttttc aatataaagg ggggaaaact aatgtctgct attttagcta aaatattcgg
     2281 tttcttacca cgtttactga ttaacatttt tgtctaaacc ctattcattt aatttaataa
     2341 acaaagaggt ggaaaaatga aagatcaaaa acaacttttt agtattcgta aatttaacag
     2401 cggtgcctca tcagtcgtta tcgcatcttt atttttcata ggtttatctc acgcacctgc
     2461 tttagccgat actgaatcaa cggcccattc atcagaacaa aagtctactg tacaagcgac
     2521 caatcaagaa gcgcctgcga ccaaagacgc tacacaagca aaatcgactg ctgaaacaaa
     2581 tcacgcacaa gaagatacac ccgcttctcc tcaagctaaa gaagcatcga caccaacatc
     2641 cgagaaaaca acaaaagata catccgtcat gtcatctaca aaaacacctt ctgctcaaca
     2701 atcaaccgaa acaaaagatt tacatactga caaaatgcaa gatgacacgg cctctgaaac
     2761 agatcaagca tcatccaaat cagtagcaga agcacctaaa gaaacagctg atttgaaaga
     2821 aacttcggaa caatcaccat cgacagcaga aacagttatt gattccgacg cacaagtgga
     2881 taatgacgca caaaaagacg tgctaaatac agttcaaact agtgaaaaca gcgcacagca
     2941 aacagaagaa actttatcta aaaatgaacc cactcactca cagaaggcac atttaccatc
     3001 tgatgaaaat cgtgtaccta caacaattga tttatctgct gacgaaacac atcaacgcca
     3061 agaattgaca gaacagtctg ataataatac aaaaacgttc aatgcacgcg ttgcacctcg
     3121 agcagtgaca acgaaaagcg tggacaaaaa tacgctcgtg aatacaaaag cgccaaaacc
     3181 tacaaaagat gatatgaaaa cactaacgac agccaatgta gcgacgacac aaccacaaaa
     3241 tcaacaacgt caagctgaac aagtgaagtc acaagcagat aaaaaagcga aacaaggctt
     3301 ctataaaaac aacgacccta tcattttagt gcacggtttt aatggcttta cagacaatat
     3361 aaacccttct gtcttatctc actattgggg tggagaaaaa ctgaatatta gacaagactt
     3421 agaagagaac ggttacaaca catatgaagc aagtattagt gcattcggta gtaactacga
     3481 ccgtgcagta gaactttatt actacattaa gggaggtact gtggattacg gtgcagcaca
     3541 cgccgcaaaa tacggtcatt cacgttacgg taaaacatat gaaggtgttt acaaagattg
     3601 gaagccaggt caaaaagttc accttgtcgg tcacagcatg ggtggacaaa cgattcgcca
     3661 attagaagcg ttgttacgca atggaaatcc tgaagaaatt gcctaccaaa aggaacacgg
     3721 tggcgatatt tctccactgt tcactggtaa taacgacaac atggtatcct ctattacaac
     3781 actcggcaca ccacataatg gaacacacgc atcagatcaa ctcggtaatg agccgattgt
     3841 acgtcaaatc gttttcgatg tcgcacaagt tcttgctaaa aataaagcac gcgtggactt
     3901 tggcttaaat caatggggtc tacagcgtaa agaaggcgag tcattggatg attactttaa
     3961 tcgcgttgca aataatgacc aattgtggcg taccgaagat aacggattct atgatctaac
     4021 acgtgaaggc gcatcaaaat tgaacaaaaa gacttcactc aatccaaata tcgtctataa
     4081 aacgtacaca ggtgaagcca cacatccgtc actttcaggt aaacaaaaag ctgattacaa
     4141 cctgtttttc ccattcacac tcacagccaa tatcatcggt aaagctgctg aaaaagaatg
     4201 gcgtgaaaat gatggtctcg tgtcagtcgt ttcatcacaa catccgtaca accaagcatg
     4261 gatcgatgct acagatgaag tgaaaaaagg ggtatggcaa gtgatgcctg tacaacatgg
     4321 ttgggaccac gtcgactttg tgggtcaaga tacgaatgat accgcacatt cacaagacga
     4381 acttaaagcc ttctggcaca aactcgcgga agacttagtc aaatcagagg atcaaacagc
     4441 ataaggaggt taggacaatg gcaggaacac caatagaact attattatcc atttttaacg
     4501 tcattaaaac gattttcaaa ttttaatcct atttaatata cacggcatcc ggacacaaga
     4561 aattttgatg ctattgatac attactttgt ttaacttgcc ttccgtatga tttgtggctt
     4621 gtgattgccc tcatggtttc gcattcttag ggactgctcc ttcaagagtc ttagccttct
     4681 gagcaatctt agacctaata cagcgaaaca gaggacaagt ttctgaaatg atgaccacca
     4741 atagcatcaa ttttttatgt tcaatgcctc cctttatttt aatactgttt tataattatt
     4801 aatgaatcat aaatttatga atggattgaa atctaaaatt ttctatgtct ccctctttca
     4861 ttgtttaaat cacttcaaaa atgtagcgca atacaaaacc actcttacta cttcacaccc
     4921 acttcctaca cgacgataat gatgaaattc atacattcac ctgttaacag tcagaaaacc
     4981 aaaataaaga ttgctagaac ctttcttctc tcacaaattc aatagccttt attcgtttgc
     5041 gagctaggcg agactcctga ggcatccagt cgaagcggaa aatcaaccaa cgcttccacc
     5101 tctgctagtg tcaaatcaag cattggttag ttgaagcgag gcgcctagga acgcgaagcc
     5161 caaaacaaca atctataaag gttaaatgat taaactgaga aaaaaggttc agcaatctat
     5221 aagatgctca cctatatttt taaaatgaat gtttttgaaa cacttcaaca tcatcaaaat
     5281 gcgggtttac ttaataatat caatcaactc tttcttcgct gcggcccgtg caggaatcca
     5341 cccaaacaca atcccaatca aagttgacac accgactgct aaaataatcg aacctaaact
     5401 cacagcgctt tgaatatatt caggtgtcac cacatcgacc aatttcgcaa tcaaaatacc
     5461 gatgactaaa ccgataatcc caccgattaa acaaagcacg acactttcga ttaaaaactg
     5521 aaactcaatg tctcttgctt ttgcaccgaa tgcacgtcga atggcaatct cttcagtacg
     5581 ttctgccacc gaaatataca tcacgttcat cacaccgata cctgcaataa agagtgaaat
     5641 ccccgccacc gctgcgacaa agtacgtaat agagtcaaag attttaccga tactcttcat
     5701 caacgcttca gtatctgcat attcgtaact tccttgcgca acagctgaac ctcgttgatt
     5761 caattgatcc gcaacttttg tcgctatttc ttttttatcc gcatcttcac caacttttaa
     5821 catcaattgt ggatagtcag atttcaagtt aggtaaatcc gcttcaactg tttttgtcgg
     5881 aatttggaca gcattcggaa cctgtgcctt ttcttttaca ccgacaactt caaaaccgat
     5941 atcgtcaata tacagtgttt gaccgactgc atcgccttta aataacgttt ccgccacttc
     6001 cgaagacacc gttgcaacac gttgtttcaa tgcattatct tccttactaa aaccctcccc
     6061 ttcgtctggt tccgtgacag tttcactttt aacgacggcc acatccgctt tctttttcac
     6121 ggtacgcgct tcagccgtta agccgaatgt atcatcttct ttaatgctcg catcttgaac
     6181 cccttcgact tgacgtgcaa cctcaatatc ttcagtcgta aaaggcggtt ctttcactgt
     6241 atcaaaatta tttggtaaaa agctgaccaa agcactgtct ttcgacgcac ctgcatcact
     6301 gaactgttcg tcggctgtct ttttaaaacc atttcctaat gacataatcg taattacggc
     6361 cgcaatccca ataataatcc cgatcattgt aaaaatatta cggcgtttat ttttcataat
     6421 cgaacgtaat gaaacgtgga gaatattagc gatgtacgcc atgcgacagc acctcttctc
     6481 tttgaactcg gccatccaaa atgtgaatga cacgatccgc ttgtgcagcg acttttggat
     6541 catgcgtcac gacaatcatc gttgtgcctt gctcttgatt caactccata aacaacgcca
     6601 taatatcttc agacgttttc gaatcgagtg ccccagttgg ctcatcggca ataataaatc
     6661 gaggacggtt cacaatcgct ctagcaatcg ccacacgctg ttgttgtccg cctgataatt
     6721 tgttgggcac taagttttct ttatcataca atccgacacg atgtaaaatg tccaacacac
     6781 gtcgattgcg ttcagctggt cgcattccgg catacaataa cggcacactg acattttcta
     6841 aaatcgtgtt gttttgtatg agtttaaaat tttgaaatac aaaccctact gtccggttac
     6901 gaatcgctgc caattcatta tctgacgttt tttggtaatt ctcaccatta aacaaatagt
     6961 ccccttcata accgcgatcg ataaaaccta aaatattgat aagtgtactc ttacctgatc
     7021 ctgaagggcc cataattgcg acaaattcac cttgttcaat ccgcaactcg atatctttta
     7081 aaatgtgatt ggtttcgttc ccatttttaa aatgacgatt gatccccttc agttcaatca
     7141 tttggccacc tcaactttct caccatcttt aattttagcg tcaggatggt tgatgatacg
     7201 atcgcctttt ttaacacctt ttttcacgat taattcacca ttcttttcgt catacgtaat
     7261 tttcgtacga tgtgccacac cagattgatc tacaatataa acatgatgat ctttcgttag
     7321 cacagatttg ggaattttga gtgtttctaa cggaatcatt gcctctatgg aatagccgtt
     7381 acgcgcatca aaatctagtt caccaatagt cattttatat ttcgatgttt ctttgtcgct
     7441 ttcacctgtt ggatgcgatt gtacaggatt attcgttgtt aatgaatcag tgccttcacc
     7501 cacaacgggc gcactaccag cagcttctca tttagcatct tgttgatagc tcgtcggaag
     7561 ttgtgaaatg tgcgtgattt tccctttacc ttctttaccg gtacttgtta ctttaatatt
     7621 gaccgtatcg ccgactttaa tcttctctaa atcaaattcc gaaatcgttg actgaatttc
     7681 taactcattc gcaattaatt tcaaaattgg ttcaccttca ccgacttgac tgttatcgac
     7741 gaaagatact gttccattaa atgtcgcatt tacactgtta ttcacttgac cgtcatagcg
     7801 attcaattgt ttccaagctt ggttaatcgc ttgttgatcc ccactttgtt gcgcgtccgt
     7861 caattgtttg actaactttt ggcgttgcgt tgggtcaata tcataattca ataatggcgt
     7921 gccttgagtg actgtctgtc catctttcac ttgaacattt aaaaaagtcc ccagttgtgc
     7981 attatttaaa tatgttttaa tcgtctccgg agagatcttc cccgtcacac gcagcggttt
     8041 ttcagttttt acagtatatg tatcgtaagc agcttcattt ttttggcctc cgacatcacc
     8101 aaatgttttc accaaaaatg ctattcctgt aagtaagata acgcctatca gtgatgacac
     8161 aatcaaagtt tttttcttca aaataaaaat cctccttaat ggcataagat actttggttg
     8221 tattataaca ttaagaagga taaattctct ttaaaaaaac aataaattta tatatatata
     8281 gcagaccgtt acaattctcc ggctaaactg agtatcgtgt cttctagagc cgctgaacct
     8341 aacgccagta atatcgtcaa tgcaatggtt aacaagccta gagtcaaagc agcacgtaaa
     8401 gacaaacgac ttgtcgcata ataaacgata aatgtcacat aacctttgaa tatcgtttgt
     8461 acatcaaaag cagctaggta catattccct ggtagaaaaa tattcaagct tgtaatgtta
     8521 tatgtaggaa atggtaaatg aaagatcagt tgaatacata caaatactag agcaaccgac
     8581 gtcacaataa gcgaatgact gaatgaggca gataatatcg tttgggccga aacatcggag
     8641 tgcaacagtt tagaaaacat cataaataca acaaatgtaa acaaaaaact aatcaatacc
     8701 cccatcaaac tactcatcgt atcagcgaac caatgaattt gatggaactc ttcaatatct
     8761 tcttttgaat aaccaaaacc ttctaataac gttgtattat ccgtatcaat tttcaacaaa
     8821 aacgcatgaa tgagtgtcac aaccatcatc aaaattgctt tcactttcca tgtcgggtgg
     8881 ttgcgcaagt cttcaaaatg ttggaataga ggtagatttg tcttgaccaa ctttgtttgc
     8941 ctcctcaaaa agattatctt aatattatca cattgttaga ggctttttta tatttcaagt
     9001 aaaaattcta aaatatgaca aaagcttata caaatatcgt gattcaagta taaaattata
     9061 ttatttaatg ctatactatt tttaatactt ttatgggagg caggtctatg gtattttcaa
     9121 aaccgctata tatagaagct tttaacagcg ataggacaca acctcattta tggaagaaag
     9181 ttttactatt gatatttttc atcattatac aaactgcact tactacgctt tctgtcgatt
     9241 acataaagct acttactgaa caagggttaa ctgaagctca agcgcaacaa tcagcacctg
     9301 ttgctatcgt ttttggcatc attgctgccg ttatcactag tctcgtcgtt gtgggcatta
     9361 cttatttgat cacactactc atttataaga ttttcaagaa agtacttatg aaaagagcga
     9421 tattcggtgc agtcttacgt tactataaca ctattttagc cgtgatgagc atcatcctca
     9481 tcattcaact gttattccaa ctcgatatca caacagttaa aattgattcg ctaaatattt
     9541 tcgcaccagg taacacgctt ttaggtgcgt tcagcttaac gaatttgttg tcaggttggt
     9601 tattcggtgt catgcttcat tcaaatggtc atttacctgc taagtggtct tggctattag
     9661 gcatcgcagt gttcatccta agtgtcgtat ttaccgcaat cgttgcataa agcatacata
     9721 aaaaagagag aggctggtaa cttaaactca gcctctttct tatcgttgtt atgcttgatt
     9781 tcgtttaaag acatggacga tacgagtgac caatgtcaat ccgatggcga gatacgcaag
     9841 ccacatgagc caaaacggta tcccttcttt accatttatc gtaccaatca gatacaccat
     9901 gtaaagcacc cacactgtca actgtacgat aactaaagtg tgcaatacat ctcgacgttg
     9961 tgaccgactt ttttcaacgg ttgccccttg aatagtgcgt tcccatactg gcgtatagag
    10021 tagcaacaaa gatagaaaaa accagataac caaaaatatc accggtataa tccacaattg
    10081 acttttcgca ccccatccgt ctacatcacc attgaagttc aaatgtgtcc ccacttgcgc
    10141 agggagttgc gtataaaata gcgctaatgt gacgatcgaa accaaccaca aaattggaat
    10201 acagcgatta atttgcttca tctacaattt cctccatcgt ggttctgaca ctacctagat
    10261 acatcgtgcc aaacttcact aaatggacga gcaataaata caactcataa aatcgaatgc
    10321 gtaacgtcgc cccttcagcg agtggatagg ctgtatcata agcttcataa aatgctggac
    10381 taaatccacc aaaaactttc gttgctccta agtcaaattc gcggtcgccg tataaaggtg
    10441 caggatcaaa cagcgcggga cggccatcag ttaaaaacat ataattgcct gcccataaat
    10501 ctccgtgtaa caaagacggt aggctctcat gttgggctaa cgtgtctgcc attaagccgt
    10561 ataccttttc aaataacgca tcatccgaat cagaccacaa ttgacgctga cgaatcacct
    10621 cagcaagcgg gtccatccgt tgttttaaaa ataatgtttg ccaatcgtct gcccacgtat
    10681 tatcgaattg aatatcccca ccttcataag gcaaatgaaa tccaaatcga ccttctcgtt
    10741 catgtgtttg atgcaattgt gcaaccaatt ttccgagcgc tttttgactg ccactttgtc
    10801 cttcgtctaa atagctcagt aatagataag catcttgatc aacctgtcct tgatcaatca
    10861 ctttcggcgc cgtcacaccc gctgcttcaa acgcttcgag acccgcgact tctgcatcga
    10921 aaaatgacgc ttcacgacct ggttgaatca gcaaaaagta aggactttca tttgtattga
    10981 tgcgaaaagc ttgattgaca tcaccaccac tgaccggttc aatcgactgg atatcgtcga
    11041 gtggtaaggt gtgataccat ttttcattca tgacattcaa ccccttttct cttttgaaat
    11101 tgaatccaaa caaactattt taacgtcgat ttaaagtcat ctatactata attgtatgat
    11161 actacttaaa ggagttgcaa caaatggaag ataaacgcca aatgttacta gatacattta
    11221 attatcgctt tgctacaaaa cgttttgatg caagtcgtaa aattgacgac gctgatttcg
    11281 atacaatttt agaaacagga cgtctgtcac cgagttcact tgggcttgaa ccttggaaat
    11341 ttttagttat tcaagatcct gaaatgcgtg aagcactcaa atcgattagt tggggcgctc
    11401 aaggacaatt agacacagcg agtcattttg tattaatttt agctcgtaaa aatgtacgtc
    11461 cagaaaatga atatttccaa aaattattac gcgatgtgaa gcaattggat acggatatga
    11521 ttgaacaaat gagcgagaaa acatccgcat tccaaaacga caatttacat ctttacgaaa
    11581 gcgaacgtgc attatgggac tgggcaagca aacaaaccta tattgtactt ggaaacatga
    11641 tgacatctgc agcattttta ggcatcgatt catgtccaat tgaagggttc caatacgatg
    11701 aagtatcacg tattttaact gaaaaaggct atttcgatga tgcagagtac gcaccatcag
    11761 ttatggtagc atttggttat cgcgaggaag atccaaaacg tgccaaaaca cgccgtagca
    11821 aggaagaagt tattgattgg gtttaatcgc catcagtcaa acatgaagga tgactgacat
    11881 caagattaat aggctgtata aatacgaatc tttagcttaa tatctgttta taaggaagcc
    11941 aacataataa acactaatcc cctcactgcc gctatagtga ggggattctt tttgtcatca
    12001 acttctcctc acactctttt atcattaaaa gctgctcccc catcttcttt caaactttga
    12061 ttgataacca aaaccaaaat gatgttgaca acagtatatc atttgaatcc aacctctata
    12121 attctgaata ttatgataaa atataactaa ttgtcacata catcgatgac attttctccg
    12181 gttcaccgat tgcgactgtt ttaaccatga tgactgtatt aacattattc tattcattca
    12241 tcatgaaact gttgaagaaa aaaacagctt caaattaata gtgcgtatct atttagtaag
    12301 gaaatatttt ttagctgact attcattatc tcacccaacc gatgacacta ctccagaatc
    12361 taaacttcaa aatcccacat aaattaactc ttcaagctgc gctaaagtcg ttaactcctt
    12421 attgtaatgt tgatatgttg taagtggagg ataaacataa tacgtatcga ttaccactag
    12481 aattttttta cactcgtatt cactgtttta ttgtactatt acggtcaaga gaaaccgtca
    12541 taacatctta ggttttcttt tccaccgttt aaatatgaac agtctgaatc ttcatttttt
    12601 cggcttaatc atgatttaat gatattgacg aggactttat aaattctctt ccaaacgtgc
    12661 attctcgctt aatttagtat aaagcaaccc ttttctattc atcggtgaca attttcgtcg
    12721 ccggattcca cttaagaatg cacatcctta actgtcataa caatcactga tactaaggtc
    12781 taaggggcct tcaatatcac attgttgtcc tagacgattg caaactaata aaaaagggat
    12841 gcaaattaat ctacgctctt ttttcaatat tatattttac ttttttaaat taaatcttct
    12901 gaattcaatt taccttcaaa gataaattgc cgttaa
//
LOCUS       DANHPA010000075        12701 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.075, whole genome shotgun sequence.
ACCESSION   DANHPA010000075 DANHPA010000000
VERSION     DANHPA010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 12701)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12701)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12701
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.075"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(758..1696)
                     /locus_tag="PTC28_001702"
     CDS             complement(758..1696)
                     /locus_tag="PTC28_001702"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HIII"
                     /protein_id="HDK5716982.1"
                     /translation="MTNIVKKLNANEIEQLLKHLHPDTQDLPTGMRARAKYEGVTISI
                     YNSQKVMFQGKNAEALWRKLIDHSERKSPAKSKSKKKPVTSTQYIRYNAHSCIGSDEA
                     GSGDYFGPLTVCACYVSAQHIPILKELGVDDSKRLTDKKIVALAEQLVTFLPHSLLVL
                     DNPKYNERKQLGWSQVKMKAVLHNECIKNVLKKVDATEVDYIVIDQFAKQEVYEHYAL
                     GAIPERQKTQFETKGESKSLAIAAASIISRYAFVKHMDQLSKRYRMEILKGASHKVDV
                     TAAKVIEKYGLEVLDGMSKSHFSNRNKALALVNSKR"
     gene            1839..2105
                     /gene="zapA"
                     /locus_tag="PTC28_001703"
     CDS             1839..2105
                     /gene="zapA"
                     /locus_tag="PTC28_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HDK5716983.1"
                     /translation="MGEFKNRINVTINDQNYTILGEDDPERIRYVADLVDGKIRELGR
                     RNAGLDSVRKAVLTAVNVMHELVLLEEENALLREEIQRLKHRGH"
     gene            2107..2628
                     /locus_tag="PTC28_001704"
     CDS             2107..2628
                     /locus_tag="PTC28_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HDK5716984.1"
                     /translation="MYLLFIIIVLLLFAMTGFHRGWNVSALHLGSTFFSLWVAAQFYQ
                     PLSHYFRLFIPYPRTVAYDTQFAMDIAQPEVRFNYVIVFLLLVMIVKTMLYFVIGSFN
                     GVFALQRLGWSSRIIGACLACCSGIIFIHFTCYVTALYPNEMMQYALAQSQVAQWFIN
                     GIPFLSEFTLNLK"
     gene            2701..4410
                     /gene="polX"
                     /locus_tag="PTC28_001705"
     CDS             2701..4410
                     /gene="polX"
                     /locus_tag="PTC28_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase/3'-5' exonuclease PolX"
                     /protein_id="HDK5716985.1"
                     /translation="MTKKDVIRLLEEIATYMELKGENAFKVSAYRKAVQSLEADERTM
                     DQIDDVTELKNIGKGVGEVINTFLETGDSPTLNALKKEVPSGLIPLLKIKGLGSKRIA
                     RLYQELNITDKDSFQKAAQNHEISALDGFGKKTEEKYLEAIRELGAKKDAYPIDTMKG
                     LNTLITKHLQSIEAIERFEVAGSFRRKKEMSKDLDYIISTNDPLEVQQQLLAIPEKVE
                     EVAVGKTKVSLELAFDDETIGVDFRLIEPAAFYHTLQHFTGSKEHNIRIRQIAKQTNE
                     KVSEYGIERPDGSLLQFDSEAAIYEHFGVKWMAPSMREDGTEFDKDLSEIVTLDDING
                     DIHMHTTASDGAFSLREMVEANIEKGYQFMCITDHSQSLRVANGLSVDRLLKQNEEIK
                     KLNQAYPEIDIYSGTEMDILPDGRLDYDDEVLAQLDYVIAAIHQSFNQSEEEIMKRLE
                     AACRNPYVRHIAHPTGRIIGRRDGYAPNMTKLIELCRETGTVLEINANPKRLDLSAEV
                     LRQNPGLKVTINTDAHHVDHLNFMNYGIATAQKGFVKKEDVVNAMSRQAFKQFITQPK
                     SVE"
     gene            4426..6774
                     /locus_tag="PTC28_001706"
     CDS             4426..6774
                     /locus_tag="PTC28_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HDK5716986.1"
                     /translation="MKQKTLEILEFNKVKSLIEQEVISDLAIEKVKQLAPSSDYETVV
                     HQMDEVDEISRIYNQYRLPSMSGLSRVQPYIKRSQIGGTLNVQELNAIKTLIQVQNQF
                     KTFYNQLVEDEETVNYEILDGQMQQLPVLTHLYQSIHQKCDTQDLFDSASMELQSIRS
                     RIAKTNQRVRAQLDRMVKSTSNQKKLSDAIVTVRNERNVIPVRAEYRQDFNGIVHDQS
                     ASGQTLYIEPSAVVELNNQISRLRSEEATEVQRILAELTAEVAEEAEACLISEQVMGH
                     LDFLIGKARYAAKIKGTKPTFSEERQVYLPKAFHPLLDRDTVVANTIEFESSIQTVII
                     TGPNTGGKTVTLKTLGLIILMAQSGLLIPTLDGSQLSVFDNVFCDIGDEQSIEQSLST
                     FSSHMKTIVNILEEANDKSLILFDELGAGTDPSEGAALAMSILDHVHGMGALVMATTH
                     YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKRLGLGLKIINH
                     AKSMIGQDEQEINEMIASLEKNAKRVDDQRIELDRLVREASQIHNDLSRAYEQYQNME
                     SRLIEEAKDKANQRVKAAMEEADDILKSLRDMRDQKGAEVKEHELIDQRKRLENQYEA
                     KSIKQNVQKQKWDEIKAGDEVKVLSYGQKGEVLEVLSDEEAVVQMGIIKMKLPLSDLE
                     KKEKAKEQPKKVVTRTNRSTVKMELDLRGYRYDEAMVALDQYLDQAVLSNYEDVYIIH
                     GKGTGALQKGVQQHLKRHKSVATYRGGMPSEGGFGVTVATLK"
     gene            6853..7167
                     /gene="trxA"
                     /locus_tag="PTC28_001707"
     CDS             6853..7167
                     /gene="trxA"
                     /locus_tag="PTC28_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HDK5716987.1"
                     /translation="MAIIEVKDSNFDEQIQSGVKLVDFWATWCGPCKMIAPVLEDLAV
                     DYEGKADILKLDVDQNQATAAKFEVMSIPTLIVFKDGQPVDKVVGFQPKENLAQVLDK
                     HV"
     gene            7434..9221
                     /gene="uvrC"
                     /locus_tag="PTC28_001708"
     CDS             7434..9221
                     /gene="uvrC"
                     /locus_tag="PTC28_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HDK5716988.1"
                     /translation="MEETQSRIKQKLGVLPMEPGCYLMKDRQNQVIYVGKAKKLRNRV
                     RSYFTGAHDTKTTRLVREIVDFEYIVTSSETESLLLELNLIKKYQPRYNILLKDDKSY
                     PFIKITKERHPKLIVTRTVRKGSGKYFGPYPNAYSAHETKKLLDRIYPFRKCDKMPDR
                     LCLYYHIGQCLGPCVYPVQQEEYGRMTKEITDFLNGEDKTILKNLEEKMIKASENLEF
                     EQAKEYRDLIQHVNNLTKKQKIMSVDQTVRDVFGYHVDKGWMCIQVFFIRQGNLIERE
                     ATMFPLQQTPEEEFYTFIGQFYQLNQHFLPKEVHIPKQLDVEMVHTVVDTNIVTPQRG
                     QKKQLVDMANKNARISLENKFELIARDESRTVKAIEQLADAMGIQIPIRIEAFDNSNI
                     QGVDPVSAMVSFVDGKPDKKGYRKYKIKSVEGPDDYKSMQEAVRRRYTRVLNEGLPLP
                     DLIIVDGGKGHMSSVADVLENELGLDIPIAGLAKNDKHQTSELLYGETAQVVPLKKNS
                     QAFYLLQRIQDEVHRFAITFHRQTRQKTGLRSILDQVEGIGPKRKTKLLRTFGSIKKM
                     REASVETLQEAGLPKKTAEVLFKALQEEG"
     gene            9386..9997
                     /locus_tag="PTC28_001709"
     CDS             9386..9997
                     /locus_tag="PTC28_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b558 subunit"
                     /protein_id="HDK5716989.1"
                     /translation="MAHSKNQFYLRRLHSLLGVIPLGGFLLVHLLVNHQATQGVEAFN
                     KAASMMESLPFLYALEIIMIYIPILYHAVYGVHIAFTASHNIGHHSYMRNWMFLFQRI
                     SGILTFIFVMIHMWQTRIQKFFGQEVNYDMVHDIVSNPIWLVFYIICIIAVAFHFSNG
                     LWSFLVTWGILQSPKSQKVFTWVSLVIFLVISYIGVSAILAFV"
     gene            10030..11796
                     /gene="sdhA"
                     /locus_tag="PTC28_001710"
     CDS             10030..11796
                     /gene="sdhA"
                     /locus_tag="PTC28_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019835741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HDK5716990.1"
                     /translation="MAEKKIIVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRSHSVC
                     AQGGINGAVNTKGEGDSPWVHFDDTVYGGDFLADQPPVKAMTEAAPQIIHLLDRMGVM
                     FNRTAEGLIDFRRFGGTLHHRTAFAGATTGQQLLYALDEQVRSYEVDGLVTKYEGWEF
                     LGIVKDDENAARGIVAQNITTSEIQSFGSDAVIMATGGPGIIFGKTTNSMINTGSAAS
                     IVYQQGVKYGNGEFIQIHPTAIPGDDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKY
                     PDYGNLVPRDIATREIFDVCVNQKLGINGENMVYLDLSHKDPHELDVKLGGIIEIYEK
                     FTGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTNIDGLFAAGECDFSQHGGNRLGANSL
                     LSAIYGGTVAGPNAVKYVENIEKSYVDMDDSMYQKRVDEEQARFDKLLNMKGSENAYK
                     LHRELGEIMTANVTVVRHNDKLLETDKKIVELMKRYQDIDMEDTSQWSNQAVFFTRQL
                     WNMLVLARVITIGAYNRNESRGAHYKPEFPERNDDEWLKHTLAEYKGPDAPPAFTYKP
                     VDVSLIPPRKRDYTSKSKGGKK"
     gene            11796..12611
                     /gene="sdhB"
                     /locus_tag="PTC28_001711"
     CDS             11796..12611
                     /gene="sdhB"
                     /locus_tag="PTC28_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HDK5716991.1"
                     /translation="MAETQEKQQTSQQVQNSTSNKTIKLIIKRQKDQNSSPYEESFEI
                     PYRENMNVIAALMEIRRNPINTKGEKTTPVTWDMNCLEEVCGACSMVINGKARQSCSA
                     IIDQLEQPIRLEPMTTFPVIRDLQVDRTRMFDNLKRMKAWVPIDGTYDLGPGPRMPEK
                     KRQTAYELSKCMTCGVCLEVCPNVTKTNSFVGAQAISQVRLFNLHPTGAMTKDERLDA
                     LMDQGGLQACGNSQNCVQACPKGIPLTTSIAAMNRETSFHMFKSFFGSDHEVE"
BASE COUNT         4216 a         2160 c         2719 g         3606 t
ORIGIN      
        1 tatatatgga aacacacttt gaagtaaaat ataaacgtcc aaacgagcaa agaaagtata
       61 aattttgata cgcaaaaagc agaaatgaat aaaattgaaa aatcgtctat caaaacgtaa
      121 aagtgaatca atgatcatag tattcgaaag caaaccagat acacagtgaa tcaaagaggt
      181 aagtattaaa gtcatcaaca tgtcgcaaaa acagaaaagc accgacaaat ataaacatga
      241 ctcaaaaatc aagaaggtgt agaaggcatg gatcatatac aataaaagag agggtatctg
      301 caatagaaaa agtagtgtag gttgagaaaa atagtaaccg aaagaaaacc agatgcacac
      361 tgaatcaaag gggtaaggat tagagttatc cacatgtcga aaaaacagaa aagtaccaaa
      421 gattgcaaga atcgcgcaag actcctgagg ggacgcgtgc atactgctag cagtcacttc
      481 tttactttaa aagtggctac cgtttaacgt agtagctgtc tgacttctca atgcgcatgc
      541 ttttgagaag tctagtcagc cttgcggggg cagtacaacg aaatcttagt tacacatgag
      601 atttctgtac tgctcccaaa atccaattcg gcctcgaaca agtatctatt ttaattaagc
      661 cgaattgagt tgaagggcca gcccctagga aagcgcagcg cgattcaaac agtctaaggt
      721 tgcaacgcct actgtcaaca agtgttcata accacaatta acgctttgaa ttcaccagtg
      781 ccaacgcttt atttcgatta ctaaaatgac ttttactcat tccatcaagc acctcaagcc
      841 catacttctc aatcaccttt gccgcagtca catccacctt atgactcgcc cctttcaaaa
      901 tttccatacg gtaacgcttc gacaactgat ccatatgttt cacaaatgca taccgtgaaa
      961 tgatactcgc cgccgcaatc gccaaagatt tcgactcacc cttcgtctca aattgcgttt
     1021 tctgacgttc tggaatcgca cctagcgcat aatgttcata aacctcttgt ttcgcaaact
     1081 gatcaataac aatataatcc acttcagttg catccacttt tttcaataca tttttaatac
     1141 attcattatg taaaacagcc ttcattttaa cttgtgacca gcctagttgt ttgcgttcat
     1201 tatatttcgg gttatccaat acgagtaaag aatgaggtaa aaatgtaacg agttgctcag
     1261 ctaaggcaac aattttttta tcagttaaac gtttggaatc atctacacct aattctttca
     1321 atataggaat atgctgtgca gaaacgtaac acgcacatac tgttaatggt ccgaaataat
     1381 caccgctacc tgcctcatca ctgccgatac aactatgtgc attgtaacga atatactgtg
     1441 tcgatgtgac gggtttcttt ttcgatttcg acttcgcagg ggacttcctt tcagagtgat
     1501 caatcagttt acgccataac gcttctgcat ttttaccttg aaacatgact ttttgtgaat
     1561 tgtaaatact gatcgtgacc ccttcatatt tcgcccgtgc gcgcatgcca gtagggagat
     1621 cttgcgtgtc gggatgaagg tgctttaaaa gttgttcaat ttcgtttgca tttaactttt
     1681 taacaatatt tgtcatccaa taccctctct tctattttta ctttaaaatg gtaacataga
     1741 atcgataaga cgggaacaat gaatgataca caaataagcc taactcgtgt ataatgtacc
     1801 atgatcaaac aaaaagataa taaggctagg tgagtgaaat gggtgagttt aaaaaccgaa
     1861 tcaatgtaac gattaatgat caaaactata cgattttagg ggaagatgac cctgaacgca
     1921 ttcgttatgt cgctgactta gtcgatggta aaattcgaga gttgggacgt agaaacgcag
     1981 gactggattc tgtgcgcaaa gctgtactaa ctgcggtcaa tgtgatgcat gaactcgtgt
     2041 tattagaaga agagaatgca ctgttacgag aagaaattca acgtttaaaa catagaggac
     2101 actaatgtgt atctactatt tattatcatt gtcttactgc tttttgcaat gacaggattt
     2161 catagaggtt ggaatgtcag tgcgttgcat ttgggaagta catttttttc tttgtgggtt
     2221 gcagctcaat tttatcaacc actcagtcat tattttaggt tgtttattcc ttatccacga
     2281 actgtcgcat acgataccca atttgctatg gatattgcgc aaccagaagt gcgattcaat
     2341 tatgtcatcg tattcctgtt gctcgtgatg attgtaaaaa cgatgctgta ttttgtgatt
     2401 ggcagcttta atggtgtgtt tgcattgcaa cgcctcggat ggtccagtag aattataggc
     2461 gcatgtctcg cttgttgttc gggcatcatt tttatccatt ttacttgtta tgtcacagca
     2521 ttgtatccga atgagatgat gcaatatgca cttgcacaat cacaagtggc tcaatggttt
     2581 attaacggca ttccattttt atcagaattt acattgaatt tgaaataaaa cagacgaatg
     2641 agtctgagac ggatatgtgt tgtcacatgg tttcaccctc ttttttaatg aggtgatgag
     2701 atgactaaga aagatgttat tcgtttatta gaagaaatcg cgacttatat ggagttaaag
     2761 ggagaaaatg cgttcaaagt ctctgcatat cgtaaagctg tccaaagttt agaagcagat
     2821 gaacgcacaa tggatcaaat tgatgatgta acagaattaa aaaatattgg taaaggtgta
     2881 ggcgaagtca ttaacacatt tttagaaaca ggtgactcac ctacactgaa tgctttaaaa
     2941 aaagaagtgc caagtggatt aattccatta ttgaaaatta aagggctcgg cagtaaacgg
     3001 attgcacgac tctatcaaga actcaatatt acggataaag attcatttca aaaagcggct
     3061 caaaaccatg aaataagtgc attagacggc tttggtaaga agactgaaga aaaatattta
     3121 gaagccattc gtgagttagg tgcgaaaaaa gatgcgtacc caatcgacac gatgaaagga
     3181 ttaaacacgc tgattacaaa acatctacag tcgatagaag cgattgaacg ttttgaagtg
     3241 gcaggcagtt ttcgtcgtaa gaaagaaatg agtaaagatt tagactatat tattagtaca
     3301 aatgatccgc ttgaagttca acaacaattg ttagcgatac ctgaaaaagt ggaagaggtt
     3361 gctgtaggaa aaacgaaagt atctctggaa ctggcttttg atgatgaaac gattggtgtg
     3421 gactttcgcc taattgaacc tgctgcattc tatcatacat tgcaacattt tacaggttct
     3481 aaagagcata atattcgaat acgtcaaatt gcgaaacaaa cgaacgaaaa agtaagtgaa
     3541 tacggcatcg aacgaccgga tggctctttg ttacaattcg atagtgaagc ggcgatttat
     3601 gaacattttg gtgtgaaatg gatggcgcca agtatgcgcg aagatggtac agaatttgat
     3661 aaagatttat cagaaattgt cacactcgat gatattaatg gggatattca tatgcatacg
     3721 actgcgagtg atggtgcgtt ttcattaaga gaaatggtag aagcaaatat cgaaaaaggc
     3781 taccaattca tgtgtattac agaccattca caaagcttac gtgtggcgaa tggtttgtct
     3841 gtggaccgtt tattgaaaca aaatgaagag attaaaaaat taaaccaagc gtacccagaa
     3901 attgatattt attcaggtac ggaaatggat attttgcctg atggtcgatt agattacgat
     3961 gatgaagtgc tcgctcaact cgattatgtc attgcggcga ttcatcaaag tttcaatcaa
     4021 tcggaagaag agattatgaa gcgattagaa gccgcatgtc gcaatcctta tgtacgtcat
     4081 attgcgcatc cgactggtcg aattattggg cgtcgtgatg gttatgcgcc gaatatgacg
     4141 aagttgattg agctctgtcg cgaaacaggg accgtgcttg aaattaatgc gaacccgaaa
     4201 cgtttagatt taagtgcgga agtgttacga caaaatccag gtttgaaagt aacgattaat
     4261 acagatgcgc accatgtcga ccatctcaac tttatgaatt atggtatcgc tacagcacaa
     4321 aaaggcttcg tcaaaaaaga ggatgtggtg aatgcgatgt ctcgacaagc atttaaacaa
     4381 tttattacgc aacccaaatc tgttgaatag aaattgaggg attggatgaa acaaaaaacg
     4441 ttagaaatat tggaatttaa taaagtgaag tcattgattg agcaagaggt catcagtgat
     4501 ttagcgattg aaaaagtaaa acaattagcg ccatcgtctg attatgagac ggtcgtccat
     4561 caaatggatg aagtggatga aatttcacga atctataatc aatatcgttt gccaagtatg
     4621 agcggtttgt cacgcgtgca accgtatatt aagcgttcgc aaattggtgg gacattgaat
     4681 gtgcaagaac tgaatgcgat taaaacgtta attcaagttc aaaaccagtt taaaacattt
     4741 tataaccaac ttgttgaaga tgaagaaacg gtcaattatg agattttaga tgggcagatg
     4801 cagcaattac ctgtattaac gcatttatac caatcgattc atcaaaaatg tgatacgcaa
     4861 gacttattcg attctgcaag tatggagtta cagtcgattc ggagtcggat tgctaaaacg
     4921 aatcaacgtg ttcgtgcaca attagatcgt atggtgaagt cgacaagtaa tcagaaaaag
     4981 ttatccgatg ccattgtgac agtgagaaat gagcgcaatg taattcctgt acgtgcagaa
     5041 tatcgccaag attttaacgg gattgtgcat gatcaatctg cttcaggtca aacactttat
     5101 atcgaacctt ctgcagtcgt cgagttgaac aatcaaatta gtcgtttacg cagtgaggaa
     5161 gcaacggaag ttcaacgcat acttgctgag ttaacggccg aagtagcaga agaagcagaa
     5221 gcatgtttga tttctgaaca agtgatgggg catttagatt ttctgattgg gaaagcgcgt
     5281 tatgctgcta aaattaaagg gacaaagccg acattttcag aagagcgcca agtgtattta
     5341 ccgaaagcat ttcacccgtt gttggaccga gacacagttg tcgcgaatac gattgaattt
     5401 gagtcttcta ttcaaactgt tattattacc ggtccgaata caggtggtaa aacagtcaca
     5461 ttaaaaacat taggcttaat tattctaatg gcacagtctg gtttgttaat tccaacacta
     5521 gatggcagtc agttgagcgt gtttgacaac gtcttttgtg acattggcga tgaacagtcg
     5581 attgaacaat cattgtctac attttcgtct catatgaaaa cgattgtaaa tattttagaa
     5641 gaagccaatg ataagagctt gattttattt gatgagcttg gtgctgggac tgatccaagt
     5701 gaaggtgcgg cccttgcgat gagcatttta gatcacgtgc atggtatggg cgcgcttgtt
     5761 atggccacga cgcactatcc tgaattgaaa gcatacagtt acaatcgtga aggggtcatg
     5821 aatgcaagtg tggaatttga tgtggatacg ttaagcccga cttacaagct tttaatgggt
     5881 gtgccaggac gttcaaatgc gtttgatatt tcgaaacgtt taggcctcgg cttgaaaatc
     5941 attaatcatg cgaaatccat gatcggtcaa gatgaacaag aaattaatga aatgattgcg
     6001 tcactcgaaa aaaatgcgaa acgtgtggat gatcagcgta ttgaacttga tcgactggtc
     6061 cgtgaagctt cacaaattca taacgactta tcacgtgcat atgaacaata tcaaaacatg
     6121 gaatcccgtt taattgaaga agcaaaagat aaggcgaatc agcgtgtcaa agcagcgatg
     6181 gaagaagcgg atgatatttt gaaatcatta cgtgatatgc gcgatcaaaa aggtgcagaa
     6241 gtgaaagaac acgagctcat tgatcaacgt aaacgcctag aaaatcaata tgaagcgaaa
     6301 tccattaaac aaaatgtgca aaagcaaaaa tgggatgaaa ttaaagcagg cgacgaagtc
     6361 aaggtgcttt cttacggtca aaaaggagaa gtgcttgaag tattgagtga tgaagaagcg
     6421 gtcgttcaaa tgggcattat taaaatgaaa ttaccattaa gtgaccttga gaaaaaagaa
     6481 aaggctaaag agcaaccgaa aaaagtggtc acacgtacga atcgttctac tgtaaaaatg
     6541 gaactggatt taagaggcta tcgttatgat gaagcgatgg tggcacttga tcagtatctc
     6601 gatcaagctg tgctcagtaa ttatgaagat gtttacatta ttcatggtaa agggacggga
     6661 gcattacaaa aaggcgtgca acaacatttg aaacgtcata aaagtgtggc tacgtacaga
     6721 ggcggcatgc caagtgaagg tggatttggt gttacagtcg caacattgaa ataattgagc
     6781 aatgataatg aaatcatgca tacaatttgt tataatttta acatcaaacg atatttaagg
     6841 aggaaacttc ctatggcaat aatagaagtg aaagattcca attttgacga acaaattcaa
     6901 tcaggtgtta agttagtaga cttttgggca acttggtgtg gcccatgtaa aatgattgca
     6961 cctgtattag aagacttagc agttgactac gaaggtaaag ctgacatttt aaaattagat
     7021 gttgaccaaa accaagcaac agcagcaaaa tttgaagtaa tgagtattcc aacattaatc
     7081 gtatttaaag acggtcaacc cgtggacaaa gttgttggat tccaaccaaa agaaaactta
     7141 gcacaagtat tagataaaca cgtataatct catattcact tttataaaaa taaatgaatt
     7201 taaatagtta gagtatcaaa ttacagttat tttattaaat ggaaagcgca gtcggtgata
     7261 agtgactccg cgtgcttgtt aaatatgaag tgaatcaccg ttgcgggagt gaaacagtca
     7321 ttgaagtatt gcgatgatgt tcgtttcact ccttttcgtt gtttataatg atgatggtgt
     7381 tatttgaaaa tgagcttgtt taaggtagga gatgtaaaga aggtgaatga tgcatggagg
     7441 agacccaaag tcgaattaaa caaaagttag gtgtgttacc aatggagccg ggctgctatt
     7501 taatgaaaga ccggcaaaac caagtcatct atgttggcaa agcgaaaaag ctacgcaatc
     7561 gtgtgcgttc ttattttaca ggcgcacatg atacaaagac gacacgttta gttcgagaga
     7621 ttgttgattt tgaatatatc gtcacttcaa gtgaaacgga atcattgttg cttgagctga
     7681 atttaattaa aaaatatcaa ccgcgctata atattttact taaagatgac aaaagttatc
     7741 cgtttataaa aatcacgaaa gaacgtcatc caaaattgat tgtgacgcga acagtgcgta
     7801 aaggaagcgg aaaatatttt ggtccttatc cgaatgccta ctctgcacat gaaacgaaaa
     7861 agttattaga tcggatttat ccatttcgaa aatgtgataa aatgccggac cgtttatgct
     7921 tgtattatca tattgggcaa tgtttaggac catgtgttta tcccgttcag caagaagaat
     7981 atggacgcat gacgaaagaa attactgatt ttttgaatgg tgaagacaaa acgattttaa
     8041 aaaatttaga agaaaaaatg attaaggcga gtgaaaatct agagtttgaa caagcgaaag
     8101 agtatcgcga tttaattcaa cacgtgaata atttgacgaa aaaacaaaaa attatgtctg
     8161 tcgatcaaac ggtgcgagat gtatttggtt atcacgtcga taaaggttgg atgtgtattc
     8221 aagtattctt tattcgacaa gggaatttga ttgaacgtga agcaacaatg tttccgttac
     8281 aacaaacgcc tgaagaagag ttttatactt ttatcggaca attttatcag ctaaatcaac
     8341 attttctacc taaagaagtg catattccga aacagctaga tgtagaaatg gtgcatactg
     8401 ttgtggatac aaacatcgtc acaccgcaac gtggacagaa aaagcaattg gtcgatatgg
     8461 ccaataaaaa tgcacgtata tcattagaga ataaatttga actgattgcg cgtgatgaat
     8521 cccgtacggt aaaagcaatt gaacaacttg ctgatgcgat gggaatacag ataccgattc
     8581 gtattgaagc cttcgataac tccaatatcc aaggtgtgga tccggtttca gcaatggtta
     8641 gctttgtgga cgggaaacca gataaaaaag ggtatcgtaa atataagatt aaatctgttg
     8701 aaggaccaga tgattataaa tcaatgcaag aagccgtacg tcgccggtac acacgtgtgt
     8761 tgaatgaagg gttaccgttg ccagacttaa tcatcgttga cggtgggaaa ggtcatatgt
     8821 cgagtgtggc agatgtcctt gaaaatgaac ttggtctaga cattccaatt gcaggacttg
     8881 caaaaaatga taaacaccaa acttcagaat tgttatatgg agaaactgcg caagtcgtcc
     8941 cattaaagaa aaatagtcaa gcgttctatt tattacaacg cattcaagat gaagtgcacc
     9001 gattcgcgat tacttttcat cgtcaaacac gacaaaagac gggattgcgt tcgattttgg
     9061 atcaagttga aggcatcggg ccaaagcgga aaacaaaatt attgcgtaca tttggttcaa
     9121 taaaaaaaat gcgcgaagca tctgtagaga cactacaaga agcgggattg ccgaaaaaaa
     9181 cggcggaggt cctttttaaa gcattacaag aggaaggcta gataaatttg gtatgagaat
     9241 cattctcata cccaaatttg tcacaattaa tgttacaata atagagagtt gatttctttt
     9301 ttttatatga tatgcaaacg ttttctcgat agtcaattac aaaaagaaat caaaaaatta
     9361 atagtatcgc agggggggac ttcctttggc acattcaaag aaccaattct accttagacg
     9421 tttacattct ttacttggtg tcattccgtt aggtggcttt ttactcgttc acttattggt
     9481 taaccatcaa gcaactcaag gggtggaagc atttaataag gcggcaagca tgatggagtc
     9541 gctaccattt ttatatgctt tagagattat catgatttat attccaattt tgtatcatgc
     9601 agtctatggc gtacatatcg cgtttacagc gagccacaac atcgggcatc attcgtatat
     9661 gcgaaattgg atgttcttgt ttcaacgtat ttcgggcatt ttaacgttta ttttcgtaat
     9721 gattcacatg tggcaaacac gtattcaaaa gttttttggt caagaagtga actacgatat
     9781 ggtacatgat atcgtatcga atccgatttg gttagtgttc tacatcatat gtatcattgc
     9841 ggtcgcattc catttctcta atggtttatg gtcattttta gtaacttggg gcattttgca
     9901 atcaccaaaa tcacaaaagg tattcacttg ggtatccctt gtcatcttcc ttgtgatttc
     9961 ttatatcggt gtaagtgcaa ttttagcttt cgtataaacg tttaatcatt tcaggggagt
    10021 gacaattcta tggcagagaa gaaaattatt gttgtcggag gcggtcttgc cggtttaatg
    10081 tcaacaatta aagcagcgga gcaaggggca catgttgatt tgttctcaat tgttccagta
    10141 aaacgctctc actcagtatg tgcacagggc ggtattaacg gagcggtaaa tacaaaaggt
    10201 gaaggtgact ctccgtgggt tcattttgat gacactgttt acggtgggga cttcttagcg
    10261 gatcaaccgc ctgttaaagc aatgactgaa gcagcaccac aaatcatcca tttattagac
    10321 cgcatgggtg tcatgtttaa ccggacagct gaaggactta tcgatttccg tcgtttcggt
    10381 ggaacattac atcacagaac tgcattcgct ggtgcgacaa caggtcaaca attattatat
    10441 gcattagatg aacaagtgcg tagttatgaa gtggatggac ttgtgacgaa atatgaagga
    10501 tgggaatttt taggtatcgt taaagatgat gaaaatgcgg cgcgtggtat tgttgcgcaa
    10561 aacatcacaa cttctgaaat tcaatctttc ggttctgatg cagtgattat ggcaactggt
    10621 ggtccaggta ttatttttgg taaaacgaca aactctatga tcaatacagg atcagctgcg
    10681 tctatcgtat atcaacaagg ggtaaaatat ggtaacggtg agtttatcca aattcaccca
    10741 acagcaattc ctggtgacga taaattacgt ttaatgagtg aatcagcacg tggtgaaggt
    10801 ggccgtattt ggacgtataa agacggtaag ccttggtatt tcttagaaga gaagtatcct
    10861 gattatggta acctcgttcc tcgtgatatt gcgacacgag aaattttcga tgtttgtgtg
    10921 aatcaaaagc tcggtattaa cggtgaaaac atggtatacc ttgacttatc acacaaagat
    10981 ccacatgaat tagatgtaaa attagggggt atcatcgaaa tttacgaaaa attcacaggt
    11041 gacgatccac gtaaagtacc aatgaaaatc ttcccagcag tacactactc aatgggtggt
    11101 ctttatgtag attatgatca aatgacgaac attgatggtt tatttgcggc aggggaatgt
    11161 gatttctcac aacatggggg taaccgttta ggtgccaact cattattatc agctatttat
    11221 ggtggtactg ttgcaggacc taatgctgtg aaatatgtag aaaacattga aaaatcttac
    11281 gttgacatgg atgatagcat gtatcaaaaa cgtgtggatg aagaacaagc acgttttgac
    11341 aagttgttaa acatgaaagg ttctgaaaat gcatataaat tgcatcgtga acttggtgaa
    11401 attatgactg cgaatgtgac ggttgttcgt cataatgaca aattgttaga aactgacaag
    11461 aaaattgttg aattgatgaa acgttaccaa gatattgata tggaagatac atcgcaatgg
    11521 agtaaccaag ctgtattctt cacacgtcaa ttgtggaaca tgcttgtgtt ggcgcgcgta
    11581 atcacaatcg gtgcttataa tcgtaatgaa tctcgtggtg cgcactataa gccggaattc
    11641 ccagaaagaa atgacgatga gtggttaaaa cacacattag ctgaatataa agggccagat
    11701 gcaccaccag catttacgta caaacctgtt gatgtcagct taatcccacc tcgtaaacgt
    11761 gactacacaa gtaagtcaaa agggggtaaa aaataatggc agaaacacaa gagaaacaac
    11821 aaacatcaca acaagttcaa aatagcactt caaataaaac aattaagtta attattaaac
    11881 gacaaaagga tcaaaattca tcaccatatg aagaatcttt tgaaattcct tatcgtgaaa
    11941 atatgaatgt catcgcagca ttaatggaaa ttcgtcgtaa cccaatcaat acaaaaggtg
    12001 aaaaaacaac accggtaaca tgggatatga actgtttaga agaggtctgt ggtgcatgtt
    12061 caatggtcat taatggtaaa gcccgtcaat catgttcagc gattatcgat caattagaac
    12121 aaccgattcg tcttgaaccg atgacgacat tcccagtcat tcgcgactta caagtagatc
    12181 gtacgcgtat gtttgacaac ttgaaacgta tgaaagcatg ggtgccgatt gatggtacgt
    12241 atgacttagg tcctggtcca cgtatgccag aaaaaaaacg tcaaacagct tacgaattat
    12301 caaaatgtat gacatgtggg gtatgtttag aagtatgtcc aaacgtcaca aaaaccaata
    12361 gtttcgtcgg tgctcaagcc atttctcaag tgcgtttgtt taacttacat ccgactggtg
    12421 caatgacaaa agacgaacgt ttagatgcgt taatggatca aggtggttta caagcttgtg
    12481 gtaactcaca aaattgtgtg caagcttgtc cgaaaggtat tccgttgaca acttctattg
    12541 cagcgatgaa ccgtgaaaca tcattccata tgttcaaatc attctttggt tctgatcatg
    12601 aagtagaata agtatattaa aatggcgcat gttcttaata gagcatgcgt tatttttatg
    12661 aaaaaagtca atttcgtatg caagtgtgta aaagaagagt c
//
LOCUS       DANHPA010000076        12517 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.076, whole genome shotgun sequence.
ACCESSION   DANHPA010000076 DANHPA010000000
VERSION     DANHPA010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 12517)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12517)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12517
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.076"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(75..1877)
                     /gene="glmS"
                     /locus_tag="PTC28_001712"
     CDS             complement(75..1877)
                     /gene="glmS"
                     /locus_tag="PTC28_001712"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HDK5716992.1"
                     /translation="MCGIVGYIGYQNSKEILLKGLEKLEYRGYDSAGIATRNDNEVTV
                     TKAKGRIAELRREADNEIDGQTGIGHTRWATHGIPNYENSHPHQSTSERFTLVHNGVI
                     ENYEELKEEYIPNVTLVSDTDTEVIVQLVEHFSETGLSTEEAFTKVVSLLHGSYALGL
                     LDREDSETIYVAKNKSPLLVGIGEKFNVIASDALAMIQVTSEYKELKDQEIVLVKRDD
                     VIIKNLDGEVVERESYIAEIDASDAEKGIYEHYMLKEIHEQPAVMRRIIQEYQDDQGE
                     LKIDPEIVKDVKEADRIYIIAAGTSYHAGLVGKEYIEKWAGIPTEVHVSSEFVYNMPL
                     LSEKPLFIYISQSGETADSRAVLVETTKLGHKSLTITNVAGSTLSREADHTLLLHAGP
                     EIAVASTKAYTAQIAVLSILSQVVATERGRKADIDLLRELAKVTTAIETIVDDAPKME
                     QIATDFLETTRNAFFIGRTIDYNVSLEGALKLKEISYIQAEGFAGGELKHGTIALIEE
                     GTPIVALATQEGVNLSIRGNVKEVVARGAHPCIIAMEGLEKPGDTYVIPHVHELLTSL
                     VSVVTLQLISYYAALHRGLDVDKPRNLAKSVTVE"
     gene            2811..4376
                     /locus_tag="PTC28_001713"
     CDS             2811..4376
                     /locus_tag="PTC28_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICB"
                     /protein_id="HDK5716993.1"
                     /translation="MANQEKAEQKPMKEQIQRRIQAFGSFLSSMIMPNIGAFIAWGLI
                     TALFIPDGWLPNEELAKMVDPMIKFLIPLLISFSGGRLVHDLRGGIVGATATMGIIAA
                     FPDTPMLIGAMIMGPLVGWLMKKVDQFIQPRTPNGLEMLFNNFSAGFLAFFMTILGFK
                     ILGPIVEGLMKILGAGVDFLVSHHLLPLVSIIIEPAKVVFLNNAINHGVLTPLASEQV
                     SQAGRSILYTLESNPGPGLGILLAYMIFGKGTEKATSYGAAFIHFIGGIHEIYFPYVL
                     ARPLLIFAAMAGGMTGVATFSLFNFGLTGPASPGSILAYFAVTPKGSYWVMLLSIFLS
                     TLVTFIVASAILKFSRDAKTSLADATAKMEATKGKKSRVRDTFIQEDEAATTTTGESS
                     SATTDNALLVEEDPEVLLDKYDTENVEAHDYSHIDHIIFACDAGMGSSAMGASMLRKK
                     FQKAGIDNVEVTNTAINQLPGESQLVITQKTLTDRAIKQVPNAIHLSVDNFLNSPRYE
                     ELIKNIKEKENKK"
     gene            4407..6437
                     /locus_tag="PTC28_001714"
     CDS             4407..6437
                     /locus_tag="PTC28_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HDK5716994.1"
                     /translation="MYIKRRERDILEILLKNQGLPISRYDIAQQLGVSSRTVHRELND
                     LDATLAPFEITIQRPKNQGLLLVGAHDDISRLQQELGQDTVIDLSTEEQKVIILYALI
                     QSNEPVKQVGLASEIGASLQQLSKVLDELEQDLNQFKIKLIRKRGVGISILGSEMHKR
                     ELLSQLMMERLDSTSVYSVIENHFVFQSLNHNRLPMVDMKEIFQVERLLMDDLDHLPY
                     ALTESSYLALIVHIVLSIERMRHEQYVSINVDTMAEVQTTDEYHIACKISARLGQHYG
                     IKFNPAEVAFITIHLRGSKRKNDKEDQQLSQNVPQVAALIDMVATETRLKFNNINELQ
                     EGLLLHLTPALNRIHAKIETYNPMTIRIQSAYPSLFQAVQHAVNDLWPHLHFPDHEIA
                     FLVLHFGGAIQKRKHASSVLVVCSSGVGTSRILANRLEETFPMIDRTTQMSVSDLKSH
                     DLTQYDAIISTVELDLEQPYLTVSPLLPEHEIAKTSAFLHQQLPQMAVDHLGLNNPDT
                     SPTVTATIDATKVNRKIDAMRESLQLLDAFEVFHTDLTDWSYDIAQHLYHKKITHDLI
                     AVQQLLKERHDKQSFVLSPFRVAIPHFISAHVEIPYIGVWHLATPYDFDEGLTVDTLF
                     CVFLPEDTHLQPLVSEIYSQLSLALDEHNDALTDAEHIEQWIKQSIITLSQQ"
     gene            6455..6889
                     /locus_tag="PTC28_001715"
     CDS             6455..6889
                     /locus_tag="PTC28_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDK5716995.1"
                     /translation="MENLLRDENILLNQSISTQEEAIEKAGQLLVDSGVVKAGYVQAM
                     KDREQIVSTFMGNALAIPHGTDEAKNEVIASGLSLLQIPEGLLWNGEEVKVVIGIAGK
                     DGEHLDLLSQIAMTFSEEENIHKIVNAASPQAIRQVFEEADA"
     gene            6889..7995
                     /locus_tag="PTC28_001716"
     CDS             6889..7995
                     /locus_tag="PTC28_001716"
                     /EC_number="1.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HDK5716996.1"
                     /translation="MKALHFGAGNIGRGFIGFILADNQFDVTFADVNTDIVNTLKAEQ
                     AYEVTLADETQTKTTIQNVNAIHSAEEPEALKNAILEADLITTAVGVNILPIIAKSLA
                     PILKTRTTPVNIVACENAINATDALKAAILDEVDTLDANIHFSNAAVDRIVPMQRNVN
                     ILDVTVEPFYEWVIEQDTWHGQQLDGVKYVDALTPYIERKLLTVNTGHAYLAYAGQYF
                     GHQTILEAVKDVKIVKALELTLTETSRYITNTFDFSVEEQAAYRQKIIDRYHNKYLSD
                     DIQRVGRGVLRKLGPQDRIMKPLKALYAANEPHDALTQLAAYALVYKDAQDPEAVQKE
                     ERIQAVGVETFLQEHAELDDQLAHAIANKYQKLS"
     gene            complement(8120..9475)
                     /locus_tag="PTC28_001717"
     CDS             complement(8120..9475)
                     /locus_tag="PTC28_001717"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HDK5716997.1"
                     /translation="MGKYFGTDGVRGVANKELTPELAFRLGRYGGYVLAHNEDKKHPR
                     VLVGKDTRVSGDMLEHALIAGLVSIGAEVMRLGVISTPGVAYLTREMGAELGVMISAS
                     HNPVADNGIKFFGSDGFKLSDAQENEIEALLDQENPDLPRPTGKDIVHTSDYFEGAQK
                     YLSYLKSTIEVNLEGLKIALDGAHGSTAALAPFLFGDLEADTVTIGCNPDGYNINDET
                     GSTHPQALAQKVVDNECDFGLAFDGDGDRLIAVDEKGQIVDGDQIMFVIGQEMAKNQE
                     LNDNMIVSTVMSNLGFYKALEAEGIQSDKTKVGDRYVVEEMRRGHYNLGGEQSGHIVM
                     MDYNTTGDGLLTGVHLAAVVKRSGKKLSELAGQMKKYPQSLVNVRVTDKYGVEDNQDV
                     KAVMDEVEAEMNGEGRILVRPSGTEPLVRVMVEAKTDEDAHGFAERIAKVVEEKMGLD
                     A"
     gene            complement(9503..10435)
                     /locus_tag="PTC28_001718"
     CDS             complement(9503..10435)
                     /locus_tag="PTC28_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbbR-like domain-containing protein"
                     /protein_id="HDK5716998.1"
                     /translation="MLESKWGLRFTAFILALLLFLSVNHVLGDSFNTDSVSNDGNKTI
                     KNAPVEVINNDKSLYISGAPDTVDVELNGPQSKVLRAQKTEDFKVVLDASNIQLGEYS
                     LDFQVRGLDKDINYRVYPKDVTVSVEKKETRTYHIEPNVSPYVIDPNFKITDTSVSPD
                     TVKITGGKAQLDRIAFVKASFRNENNISEKTTGEANISVFDKNMNKLDVQVDHPTVDL
                     TAEVEPYSKKVKLDVSTKGTPADGINISSIDLESDAIEIFGNRHDLEKINEISGEIDV
                     KGVSSDTEREVKLDLPKNVTKTSPEKLKAKINVE"
     gene            complement(10436..11242)
                     /locus_tag="PTC28_001719"
     CDS             complement(10436..11242)
                     /locus_tag="PTC28_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002475624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00159 family protein"
                     /protein_id="HDK5716999.1"
                     /translation="MQISHLFENLSTLEVITGILDLLIVWYVIYLLITVFKGTKAIQL
                     LKGILFILVGKAISEYLQLTTTSRLFDLVLQWGFLAIIVIFQPEIRRALEQLGRGSLF
                     KRYATTSTVEVPKLVDSVSKAVQYMAKRRIGALIVFEKETGLQDYIETGIPMHSDISQ
                     ELLTNVFIPNTPLHDGAMIIQGDKIATAASYLPLSDSPKIAKSLGTRHRAAVGISEVS
                     DAFTVVVSEETGSVSVTFDGKLRKDISPEVFEELLTEHWFGSHFGKKGVN"
     gene            complement(11474..12379)
                     /gene="rocF"
                     /locus_tag="PTC28_001720"
     CDS             complement(11474..12379)
                     /gene="rocF"
                     /locus_tag="PTC28_001720"
                     /EC_number="3.5.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginase"
                     /protein_id="HDK5717000.1"
                     /translation="MNKIIELIGAPTTFGQKKLGVNLGPDAIRYAGVLPRLKRIGHEV
                     IDTGNVDVPPVDIEKFMSQQEGLQNYEEILAFSKSLKEKVSDSIRQQHFPVILGGDHS
                     LAIGSISGVAEHYDHLGVIWYDAHGDLNVPEESPSGNMHGMPLRILAGEGDEKLVQLG
                     GFAPKVKPENIVLIGMRDLDFGEREYIKKHQIRTYTMADIDERGIRSVIEESIAYLKD
                     KTDGVHLSLDVDALDPNETPGTGTKVSGGLTYRESHYALELLNQSGMITSMDIVEVNP
                     LLDVENHTAEQAVALLGSFFGETLL"
BASE COUNT         3769 a         2637 c         2172 g         3939 t
ORIGIN      
        1 ggccaggaat tgagtttgtt cctagcccct taaaaatcta tcaatatcgc ttacaaatta
       61 attgcacgca atcactattc cactgttact gattttgcta agttacgtgg cttatctacg
      121 tctaggccac ggtgtaatgc ggcatagtat gaaatcaatt gtaatgtcac aactgatacg
      181 agtgatgtta ataactcgtg aacgtgagga atcacatacg tgtcgcctgg tttttcaagg
      241 ccttccattg cgatgataca tggatgtgca ccacgcgcaa caacctcttt cacgttacca
      301 cgaattgaaa ggttcacgcc ttcttgtgtg gctaatgcta cgattggtgt cccttcttca
      361 attaatgcaa tcgtaccgtg ttttaattct ccgcctgcaa aaccttcagc ttgaatgtat
      421 gaaatctctt tcaatttcaa tgcaccttct aagctgacgt tgtagtcaat tgtacgtcca
      481 ataaagaatg cattgcgtgt tgtttctaaa aagtctgtcg caatttgttc cattttcggt
      541 gcatcgtcta caatagtttc gattgcagtt gtgactttgg ctaattcacg taataagtcg
      601 atgtctgctt tacgaccacg ttctgttgct acgacttgag aaaggataga taataccgca
      661 atttgtgctg tatacgcttt agttgacgct accgcaatct caggacctgc atgtaacaat
      721 aatgtgtgat ccgcttcacg tgacaatgtt gaacctgcaa catttgtaat tgtaagtgac
      781 ttgtgaccga gttttgttgt ttctactaat acggcacggc tgtccgcagt ttcacctgat
      841 tgagaaatgt agataaacaa tggtttttca gataataatg gcatgttgta tacaaattct
      901 gatgacacat gtacctctgt cggaatacct gcccattttt caatgtattc tttaccaact
      961 aaacctgcgt gataacttgt acctgctgca atgatgtaaa tgcggtcagc ttcttttaca
     1021 tctttcacaa tttcagggtc gattttcaac tcaccttggt cgtcttgata ttcttgaata
     1081 atacggcgca ttacggcagg ttgttcgtga atttctttta acatatagtg ttcgtaaatg
     1141 cctttttcag catccgaagc gtcgatttca gcaatatagc tttcacgttc aacaacttca
     1201 ccatctaagt ttttaatgat gacatcatca cgtttaacaa gtacgatttc ttggtctttc
     1261 aattctttat actcgcttgt cacttgaatc atcgctaatg catctgaagc gataacgttg
     1321 aatttttcac cgataccgac taataatggt gatttgtttt tagcgacata gattgtttcg
     1381 ctatcttcgc ggtctaataa acctaatgca tatgaaccgt gtaataaact caccactttt
     1441 gtaaatgctt cttcagttga taaaccagtt tctgaaaaat gctcaactaa ttgtacaata
     1501 acttcagtat ctgtatctga tacaagtgtc acattaggaa tatattcttc ttttaattct
     1561 tcatagtttt caatcacacc attgtgtact agtgtaaaac gttcacttgt tgactgatgt
     1621 ggatgtgaat tttcatagtt aggaatacca tgggtcgccc aacgtgtatg accgatacct
     1681 gtttgaccgt caatctcgtt gtctgcttca cggcgtaatt cagcaatacg ccctttcgct
     1741 tttgtaacag tcacttcatt gtcattgcgt gttgcaatcc ccgctgagtc ataaccacga
     1801 tactctaact tttctaaacc ttttaataaa atctcttttg aattttgata tccaatataa
     1861 ccaacaattc cgcacataaa taaattcctc cacattgaaa taacggtgcc attgtacatg
     1921 ttttcacata ttggtacatg ctgttttcat gcctcaataa tgaaaattgc attagcatcg
     1981 ttctctaatt attattttgc tattggcgat cttactaact ttgtccaaca agttaccctg
     2041 ttgatttgat taataagcta acgaatgagc cacatccggg atagcatccg ccgatcatat
     2101 tcgatcacta tcctcctcgt ccacaactac aacctataca tctgctacac actctgcttt
     2161 agtatgtagg tcaacaatct atagtgtgta cttgcgctgg cgctttgtaa taccgactac
     2221 ctctaccctc ctccatcaga atataaccta ttgtacaatg agtgaaactt tctttgcaaa
     2281 taaaagtaca atatttccga aaattattgt taaatgtttg agtctgatat actgtgcttt
     2341 tttacttaat tatatatttt tgatattcaa tgctgttaca ttaaaatcat taatcattat
     2401 ttgcgcacaa tggtcaatgc aattccctca tctatctttt aaaatcgctt tcactttaag
     2461 ttatgcatta gtttgtcctc attaacacca tttgtcattt ttctctctca atagtccttt
     2521 ctaaaaagta acatcgagac atcatttgtc attttacacg ccatttcacg tctcatctta
     2581 aacacagcac gaagccgctt catttctttt tactattgtc gcaaaatttt tggttattgt
     2641 tttctaaacc atttcttcat cgccatcgcg ttccttctat aatttatatc actaaatgta
     2701 ttttgtcatt ttcaacgtga caagttggca ttttctattt attgtaaacg actaaataac
     2761 actttaagat gtacacacaa accaattttt taataagggg tgtcaaatag atggcaaatc
     2821 aagaaaaagc agaacaaaag ccgatgaaag aacagattca acgtcgcatt caagcattcg
     2881 gctcattttt aagtagtatg atcatgccga atatcggtgc gttcattgct tggggtttga
     2941 ttactgcatt attcattcct gatggctggc ttccaaatga ggaacttgcc aaaatggtcg
     3001 acccgatgat caagttttta attccattac tcatctcatt tagtgggggt cgtcttgtcc
     3061 atgatttacg tggtgggatt gttggtgcga ctgcaacaat gggtatcatc gctgcattcc
     3121 cagatacacc tatgttaatc ggtgcgatga ttatgggtcc attagtcggt tggctgatga
     3181 aaaaagtgga tcagtttata caaccacgca caccaaacgg cttagaaatg ctattcaata
     3241 acttttcagc aggtttcctt gcattcttca tgactattct cggttttaaa attttaggac
     3301 ctattgttga aggtttaatg aaaattctcg gtgcaggtgt agatttccta gtttcacacc
     3361 acttacttcc acttgtaagt atcattattg aacctgcaaa agttgtcttt ttaaacaatg
     3421 cgattaatca tggtgtgctt acaccgctcg catcagaaca agtgagccaa gcaggtcgtt
     3481 cgattcttta cacattagag tctaaccctg gacctggttt aggtatttta cttgcttata
     3541 tgatttttgg taaaggcact gaaaaagcaa catcatacgg ggcagcattc atccacttta
     3601 tcggtggtat tcatgaaatt tacttccctt acgttcttgc acgtccgttg ttaatctttg
     3661 cagcaatggc gggtggtatg acaggtgttg caacttttag cttatttaac tttggcttaa
     3721 caggtccagc gtcaccaggt tcaatccttg cttactttgc ggtgacacct aaaggcagtt
     3781 actgggtaat gttactcagc attttcttat caacattagt gacattcatc gtcgcatctg
     3841 ccattttgaa attttctaga gatgctaaaa caagtcttgc tgatgcaaca gcgaaaatgg
     3901 aagcgacaaa aggtaaaaaa tctcgtgttc gcgacacatt cattcaagaa gatgaagcag
     3961 ctacaactac aactggtgaa tcgtcatctg caacaactga caacgcatta cttgtagaag
     4021 aagatccaga agtattgtta gacaaatatg acactgaaaa tgttgaagca catgattata
     4081 gccatatcga ccacattatt ttcgcttgtg atgctggtat gggttcgagt gcaatgggtg
     4141 caagtatgtt acgtaaaaaa ttccaaaaag ctggtatcga caatgtagag gtgacaaata
     4201 cagcaatcaa ccaacttcct ggtgagtcgc aacttgtcat tactcaaaaa acattaacag
     4261 accgtgcgat taaacaagta cctaatgcga ttcatctttc tgtagataat ttcttaaact
     4321 caccacgcta tgaagagtta attaaaaaca ttaaagaaaa agagaataaa aaataagaaa
     4381 tcgcgtaatg gggatgtgat tacttcatgt atatcaaacg tcgggagcgt gacatattag
     4441 aaatactcct gaaaaatcaa gggttaccta tttctagata tgatatcgct caacaattag
     4501 gggtgtcttc gcgaacggtg catcgagaac tgaacgatct cgatgcgacc ctcgcacctt
     4561 ttgaaatcac cattcaacgt cctaaaaatc aaggactcct cttggtaggt gctcatgatg
     4621 atattagccg attacaacaa gaactcggtc aagacactgt cattgattta agtacagaag
     4681 aacaaaaagt tattatttta tatgctttaa ttcagtctaa tgaacccgta aaacaagtcg
     4741 gactcgcttc ggaaattggt gcatcactgc aacaactgag caaagtgttg gatgaactcg
     4801 aacaagattt gaatcagttc aaaattaagc tcattcgaaa acgcggtgtc ggaatttcaa
     4861 tcctcggtag cgaaatgcat aaacgtgaac tgttaagcca attgatgatg gaacgcttag
     4921 atagtacaag tgtgtattcc gtcattgaaa accattttgt ctttcaatcg ttaaatcata
     4981 accgactgcc tatggtcgat atgaaagaaa tttttcaagt tgaacgattg cttatggatg
     5041 atttggatca cttgccgtat gcattgacag aatcaagtta tttggcactc attgttcaca
     5101 tcgtattaag tattgagcgt atgcgtcacg aacaatatgt ctctattaac gtcgacacta
     5161 tggcagaagt tcaaacgact gatgaatatc acattgcttg taaaatttca gctcgcctcg
     5221 gacagcatta tggcattaag ttcaacccag ctgaagttgc ctttattacg attcatttac
     5281 gagggtcaaa gcgaaaaaat gataaagagg atcaacaatt atcacaaaat gtaccacaag
     5341 ttgctgcgtt aattgacatg gtcgcaacag agactcgtct gaagtttaac aatatcaatg
     5401 aactgcaaga aggtttgttg ttacatctca cgcctgcttt aaatcggata cacgccaaaa
     5461 tcgaaactta caatccgatg acgatacgca ttcaaagcgc ttatccgtca ctatttcaag
     5521 cggtacaaca tgccgtcaat gatttatggc cacaccttca ttttccagac catgaaattg
     5581 cttttttagt cttacatttt ggtggcgcta tacaaaaacg caaacatgca tcatctgtac
     5641 ttgtcgtatg tagtagtggt gtcggcacaa gtcgtatttt ggccaatcgc ttagaagaaa
     5701 catttcccat gattgaccgt acgacacaaa tgtctgtgag tgatttgaaa tcgcatgacc
     5761 tcacacagta tgacgcgatt atttctactg tagagctaga tttagagcaa ccgtatttaa
     5821 cggtgagccc cctactaccc gaacatgaaa ttgcgaaaac ttctgcattt ttgcaccaac
     5881 aactaccgca aatggcagta gaccatctgg gtttaaataa tccggacaca tcacctactg
     5941 taacggctac gattgatgcg acaaaagtga acagaaaaat tgatgcgatg cgcgaaagtt
     6001 tacaactgtt agatgcattt gaagtattcc atacagatct gacggattgg tcatatgata
     6061 tcgcgcaaca tctttatcac aaaaagatta cgcacgattt aatagctgta caacaacttt
     6121 tgaaagaacg tcatgataag caatcttttg tattatcccc atttcgagtc gcgattccac
     6181 attttataag tgcacacgtc gaaatacctt acatcggcgt atggcactta gcgacaccct
     6241 acgactttga tgaaggactc actgtcgaca cgttattctg tgtcttttta ccggaagata
     6301 cacaccttca acctctcgtc agtgaaatct atagtcagct gtcgcttgct ttagatgagc
     6361 ataatgacgc actgaccgac gcagaacaca ttgaacaatg gattaagcaa agtattatca
     6421 cattgagtca acaataacaa ggagcgattt gattatggaa aacttattaa gagatgaaaa
     6481 tattttatta aaccaatcta tttcaacaca agaagaagca attgaaaaag caggacaact
     6541 acttgtagac agtggtgtcg ttaaagcagg ttatgtacaa gcgatgaaag accgtgaaca
     6601 aattgtatca acatttatgg gtaacgcttt agctattcca cacggcacag atgaagcgaa
     6661 aaatgaagtg atcgcatcag gtttatcatt attacaaatt cctgaaggct tactctggaa
     6721 cggtgaagaa gtgaaagtgg tcattggtat tgctggtaaa gatggcgaac atttagactt
     6781 attatcacaa attgcaatga cattcagtga agaagagaat atacacaaaa ttgttaatgc
     6841 tgcatctcca caagcaattc gtcaagtgtt cgaggaggcg gatgcataat gaaagcactt
     6901 cattttggag cgggtaatat cggtcgtggt tttattggct ttatccttgc agacaaccag
     6961 tttgacgtga catttgcgga tgttaataca gatatcgtca atacccttaa agcagaacaa
     7021 gcttatgaag tgacactcgc tgatgagaca caaacgaaga cgacaattca aaacgtcaat
     7081 gccattcatt ctgctgaaga accagaagca cttaaaaatg cgattttaga agcagatttg
     7141 attacaactg cagtaggtgt caacatttta ccaatcatcg caaaatcatt agcaccgatt
     7201 ttaaaaacgc gtacaacacc tgtgaacatc gttgcttgtg aaaatgcgat taatgcgaca
     7261 gatgcattga aagcagcaat tttagatgaa gtagatacat tagatgccaa cattcatttc
     7321 tctaatgctg ccgtagaccg tatcgtccct atgcaacgca atgtcaatat tttagatgta
     7381 acagtagaac cattttacga gtgggtaatc gaacaagaca cttggcacgg tcaacaatta
     7441 gacggtgtga aatatgtaga tgcgctcaca ccttatatcg aacgtaaatt gctgacagtg
     7501 aatacaggtc atgcttacct tgcttatgca ggtcagtatt tcggtcatca aacgatttta
     7561 gaagcggtta aagatgtcaa aattgtaaaa gcattagaac ttacattaac agaaacaagt
     7621 cgttatatta ccaacacatt tgacttttct gtagaagaac aagccgcata tcgtcaaaaa
     7681 atcatcgaca gataccacaa taaatatttg tcagatgaca ttcaacgtgt cggacgcggt
     7741 gttttaagaa aactaggtcc acaagaccgt attatgaaac cattgaaagc actatatgca
     7801 gccaatgaac cacatgatgc gttaacacaa cttgcagctt atgccctcgt gtacaaagat
     7861 gcacaagatc cagaagctgt tcaaaaagaa gaacggattc aagcagtcgg tgttgaaacg
     7921 tttttacaag aacatgctga attagatgac caattagcac atgctattgc gaacaaatat
     7981 caaaaattat cataacatta aaaaaagccg ggaattgcgc atcccagctt ttttatcaat
     8041 tgtttggtct caatttctca aacaaaaacc tccccctctt aacaaggtac acatgacact
     8101 tgttagaggg gcattatttt taagcgtcta agcccatttt ttcttctact acttttgcaa
     8161 tacgttctgc aaagccatgt gcatcttcgt cagttttagc ttctaccatg acacgtacga
     8221 gtggttctgt acctgatggg cgaactaaaa ttcgaccttc accattcatt tccgcttcaa
     8281 cttcatccat tacagctttg acgtcttgat tgtcttctac gccatattta tccgttacac
     8341 gaacattcac aagtgattgc ggatatttct tcatttgacc tgcaagttca ctcaactttt
     8401 tacctgaacg tttcacaact gctgccaaat gtacaccagt taataaaccg tcccctgttg
     8461 tattgtaatc catcataacg atatgacctg attgctcgcc acctaaattg tagtgaccac
     8521 gacgcatttc ttccacaaca tagcggtcac cgactttcgt tttatcagat tgaatacctt
     8581 ccgcttctaa tgctttgtag aaacctaagt tactcatcac tgttgacaca atcatattat
     8641 cgttcaattc ttgatttttc gccatctctt gtccgataac aaacataatt tgatcaccat
     8701 cgacaatttg acctttttca tcgactgcga ttaatcggtc accatcacca tcaaatgcta
     8761 agccaaagtc acattcatta tcgacaactt tttgtgctaa cgcttgtggg tgtgtcgaac
     8821 ctgtctcatc attaatattg taaccatctg gattacagcc aattgtcact gtatctgctt
     8881 caaggtcacc gaataaaaat ggtgctagtg ctgctgttga accgtgtgca ccgtctaatg
     8941 caatttttaa gccttctaaa ttcacttcga tagttgattt taaataactt aaatattttt
     9001 gtgcgccttc gaaataatcc gatgtgtgca caatatcttt acctgtagga cgtggtaaat
     9061 caggattttc ttgatccaat aatgcctcaa tttcattctc ttgcgcatct gacaatttga
     9121 agccatctga accaaagaac ttaataccat tatccgcaac agggttatgt gaagctgaaa
     9181 tcatcacacc taactctgca cccatttctc ttgttaaata agccacacct ggagtagaaa
     9241 tgacacctaa acgcatgact tcagcaccaa tagaaactaa acctgcaatt aatgcatgtt
     9301 ctaacatgtc acctgaaaca cgtgtatctt tacctacaag gacacgtgga tgttttttat
     9361 cttcgttatg tgctaaaaca tatcccccat aacgacctaa cctgaaagcg agctcaggtg
     9421 tgagttcttt gttcgcaacg cctcttacac catctgtccc aaaatattta cccataaatc
     9481 aaatctcctt ttatttcatt catcattcta catttatttt tgcttttaat ttttctggtg
     9541 atgttttcgt cacatttttc ggtaagtcta gctttacttc ccgttctgta tcagatgaaa
     9601 cacctttcac atcaatttca ccactaattt cattgatctt ctctaaatca tgacggtttc
     9661 caaatatttc tatcgcatct gactccagat caatactcga tatattgata ccatctgcag
     9721 gggttccttt tgtcgacacg tctaatttaa cttttttgga ataaggttcc acttctgcag
     9781 ttaaatcaac tgtcggatga tcgacttgca catccagttt attcatgttc ttatcaaaaa
     9841 ctgaaatatt cgcttctccc gtggtctttt ctgaaatatt gttctcatta cggaaacttg
     9901 ctttcacaaa tgcgatgcgg tctaattgtg ccttgccccc tgtgattttt accgtatctg
     9961 gtgacaccga tgtatctgta atcttgaaat tgggatcaat cacatatgga ctcacattcg
    10021 gctcaatatg atatgttctc gtttcctttt tctcaactga gactgtgaca tctttcggat
    10081 aaacacgata gttaatatct ttatctaagc cacgcacttg gaagtctagc gaatattcac
    10141 ctagttgaat gtttgacgca tctaacacaa ctttaaaatc ttctgttttt tgtgcgcgta
    10201 acactttaga ttgcggtcca ttcaactcga catcaaccgt atcaggcgcg ccagagatat
    10261 aaagactttt atcgttgtta atcacttcaa ccggtgcatt tttaatcgtt ttattcccat
    10321 cattggaaac actgtctgta ttaaacgaat caccgagcac gtgattgact gataaaaata
    10381 agagcaatgc taaaataaaa gcagtaaaac gtaagcccca ttttgattct aacatctaat
    10441 tcacaccttt ctttccaaag tgtgagccaa accaatgctc tgttaacagt tcttcaaaca
    10501 cttcaggtga tatatctttt ctcaatttcc catcaaatgt gacagaaact gatcccgtct
    10561 cctcagacac aacgacggta aaggcatcag aaacttctga aattccaact gctgcacgat
    10621 gacgtgtgcc gagacttttc gcgattttcg gactatctga caacggtaaa taactggccg
    10681 ctgttgcaat tttgtcacct tgaataatca tcgcgccatc atgtaatggc gtgttcggaa
    10741 taaagacgtt cgtcaataat tcttgtgaaa tgtcagaatg catcggtata cccgtttcga
    10801 tgtaatcctg taaaccggtt tctttttcaa agacaattaa cgcacctatc cgtcgcttgg
    10861 ccatatactg cacggcttta gagactgaat ccactaattt gggcacttct actgtagacg
    10921 tcgtggcata gcgtttgaac aagctccctc tcccaagttg ttctaacgca cgtctaattt
    10981 caggttggaa aattacaata atggctaaga acccccattg taataccaaa tcaaaaagtc
    11041 tcgaagtcgt tgtcagttgt aagtattcac tgattgcttt ccctacaagt ataaataata
    11101 tcccttttaa taattgaatt gctttcgtcc ctttaaagac tgtaatcagt aaataaatga
    11161 cataccatac aattaataaa tctagaatac ctgtgatgac ctcaagcgtg cttaaatttt
    11221 caaagaggtg tgaaatttgc atagtatctc ctccggtaat ctattcccat gttccttatt
    11281 ataccaatgt tcataagcgt ttgtcatatc agagtaaaaa taaatcactt ttaaatattt
    11341 cattcgatat attcaatcgt tttatgtaaa ataggatgaa ttcaactgaa caacaaatca
    11401 aaaacgagat aaagatgaca tacttgcgcc ttacctcgtt tcaatattta acattcatat
    11461 tttaaatgat actttataac aatgtttcgc caaaaaatga acctaacaga gcaacggctt
    11521 gttctgcagt atgattttct acatctaaaa gtggattcac ttcaacaata tccattgatg
    11581 taatcatgcc ggattgattg agtaattcta atgcataatg actctcacga taggttaagc
    11641 cacctgaaac tttcgtacct gtacccggtg tttcattagg atctaaagca tcgacatcta
    11701 atgataaatg cacaccatca gtcttatctt ttaaatatgc aatactttct tcaatgactg
    11761 aacgaatacc ccgctcatca atatcagcca tcgtatatgt acgaatttga tgtttcttaa
    11821 tatattcacg ttcaccaaaa tctaaatcac gcataccgat tagcacaata ttttctggtt
    11881 tcactttagg tgcaaagcca ccaagttgaa cgagcttttc atccccttca cccgccaaaa
    11941 tacgtaatgg catcccgtgc atattaccgg atggcgattc ttctggtaca ttcagatcac
    12001 catgtgcgtc ataccaaatg acacctaagt gatcataatg ctctgcaaca cccgagatcg
    12061 aaccaatagc taacgaatgg tcacccccta aaataacggg gaaatgttgt tgacgaatac
    12121 tgtccgacac tttttccttt aatgattttg agaaagcgag aatctcttca taattttgta
    12181 aaccctcttg ttgagacatg aatttctcaa tatccacagg aggaacgtca acgttccctg
    12241 tgtcaatgac ctcatgaccg atacgtttta aacgaggtaa caccccagca tatcgaatag
    12301 catctggccc caaattaaca cctagctttt tctgtccaaa tgtagtgggt gcaccgatga
    12361 gttctataat tttattcatt tgttgtctcc ccttttttta atgattcatt taacaatgtc
    12421 tgcatctcaa ttgccccttt aaatcaattg aatatgcata caatttcaga atagttgttt
    12481 agaccgttga attcaagtgc tgtaattatg tagaagt
//
LOCUS       DANHPA010000077        12498 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.077, whole genome shotgun sequence.
ACCESSION   DANHPA010000077 DANHPA010000000
VERSION     DANHPA010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 12498)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12498)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12498
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.077"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            128..850
                     /locus_tag="PTC28_001721"
     CDS             128..850
                     /locus_tag="PTC28_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717001.1"
                     /translation="MKRLAFALFAFLLLLAGCGDKDSKKEEQSSTQNDKTEKTAKQQE
                     KTLENNKKEVADTTNESQQTENKGIDKDTKNNQQETKQKNVQNQSTDKQANVSHSPSH
                     ETKKDLNEASRIALVFFGNDIQHYTITKSEILKGQYEYQGAGMTTTKNVNQLTLIHQR
                     DIPNAPSGMKFYTLDPPKGNFATIIGVNQNKVFVGGTQGALVDYQELLTTGKEMNLQS
                     LYEAYKNDPAYTSILNKIKIVN"
     gene            1216..2025
                     /gene="cntK"
                     /locus_tag="PTC28_001722"
     CDS             1216..2025
                     /gene="cntK"
                     /locus_tag="PTC28_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine racemase CntK"
                     /protein_id="HDK5717002.1"
                     /translation="MEIVHFSKFNPSGNMTVLVDSQHDPSQYRHIAQQLMKSSHVGCE
                     QVGFIVDDEGELPHQLVMSGQEFCGNGTLSFIRYLKDRNLLTTSSFKLKVSGMDTPVH
                     CAIHETPQQFETTLPQPKKILERQYKIDDVLFEGLEIQYDTYQHFVFPITVWSEKLAS
                     SIESFVRAEEWPEHLTAVGLMLYDTLHQRLYPLIYVPQIDSIIWEQSCGSGTGSVGVY
                     EAYQNQLEHLEKEIVQPGGALTAIVDHNDEGYQVAIKGNVSTVATGLAYIE"
     gene            2035..2853
                     /gene="cntL"
                     /locus_tag="PTC28_001723"
     CDS             2035..2853
                     /gene="cntL"
                     /locus_tag="PTC28_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylopine biosynthesis enzyme CntL"
                     /protein_id="HDK5717003.1"
                     /translation="MNKIQQNTHEIEAQLKHYQQQFEHLYHNIQQGERALNDLERLID
                     EYSSYILDEQPKQQYEHWRSQTTEQQHLIKPLADITAKCVKLMESSRARRLIHGEHGT
                     TGYFDNIEHCISEEFGQFEITCEDTVLLVGSGAYPMTLVQIAKETGARVIGIDIDEEA
                     VRYGQQVIRILAPDAPIEIHQATVSELEGIQNVTHVIFSSTVEMKYDILEELYHLTGH
                     DIVVSMRYGDGLKSIFNYPKQETHPQQWTFVDDITRPDQIFDIALYQKKSEGRA"
     gene            2856..4151
                     /gene="cntM"
                     /locus_tag="PTC28_001724"
     CDS             2856..4151
                     /gene="cntM"
                     /locus_tag="PTC28_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylopine biosynthesis dehydrogenase"
                     /protein_id="HDK5717004.1"
                     /translation="MKKSVLIAGTGPVAVQLAVLFKTYTTHHVDMVGRSDVSAKAQQF
                     WQAYQNAQQLEVQVQNDLHMALAGTATLGRLYELYEAVEPHYDVLVLACTADAYSQVI
                     QQLSPAVRQQLKHVVLVSPTFGSHMVVQQQFSAEQPNIEVISFSTYLGDTTVSHPETP
                     HRVLTKGIKKHLYIGTIYEQSDFSQEIIDLLSEVQIPVTQVAHPLMAESRNSSLYVHP
                     ALFMNKHALKAVFEGMTVPFYVYKLFPEGPITMQLIAEMRQMWQEVMAILKHLNIDTL
                     NLLKFMVKENYPLRPETMDDDRIEAFETLSAIEQEYLLYVRYTGILIDPFSEPDENGK
                     YFDFSAVPFKEVFRNEEGVWQIPRMPNEDYYRTQMMRGIAQALNISTPMMDTLIQRYE
                     AQLTAFQKAHPNDRVSTQFQIQSFEEDINSIAKLLNSEG"
     gene            4389..5987
                     /gene="nikA"
                     /locus_tag="PTC28_001725"
     CDS             4389..5987
                     /gene="nikA"
                     /locus_tag="PTC28_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter, nickel/metallophore
                     periplasmic binding protein"
                     /protein_id="HDK5717005.1"
                     /translation="MMKNLKWIAVSIVMLLVLAACGNSKALEQKKEDKNLTYATSKDI
                     GDMNPHVYGGSMSAQGMVYESLVDHTQKGIEPLLAESWDVSEDGKTYTFHLRKGVKFQ
                     DGTPFNADAVKKNFDAIQANQKLHSWIKLSTLIDRTEAKDDHTFVMTLKEPYNATLEE
                     LAMTRPYVFVSPKSFKAEGTKDGLKSYVGTGPYQLKSHDKDEQATFERNEDYWGGKPH
                     LKTIVAKVLPAGETSFLALQKGEVNFAFTDDRGTDNIDNEAMKKLTDNGDFQLKRSQP
                     MNTKMIVANSGKKDSPAQDKAVREALWYSVDQKRIADKILEGTEKPASQLFSKNVPHA
                     NIDLPKRDFDLKKAAALLDEAGWKQNDKGEVREKDGQKLEMTLYYDNHSSSQKQEAEF
                     IQAKAKEIGMALKIVGETSDKVAERRTSGDYDLLFNQTWGLQYDPQSTISGFKADTGY
                     KAAVSGIKEKDQLFDDIDTALKTQDAKEQDQKYKDILTTVHDEAIFIPISHGGMTVVA
                     PKDLEHISFKQSQYELPFEQMDYK"
     gene            6000..6932
                     /locus_tag="PTC28_001726"
     CDS             6000..6932
                     /locus_tag="PTC28_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5717006.1"
                     /translation="MAYSAMKRLLLMIPLLIVISFLTFALTHLSSEDPAVVILHAQEV
                     PDITQSLIEQTRAKYYLDAPFLVQYWEWLQSAVQLQFGHSFVTGEDVGLRLWPAFFNT
                     LKLTLISSVAIIVLSLLFGILTALLRGTWFDRMTRTTAFVLTAIPSYWLAAILIIFLS
                     VKLNALPTSGLTGPESYILPVAVITLGYTGIYFRNVRSAVIQQLDQDYVLYMRAMGVP
                     MSQLLVYVARNAMQVVVSIFCMSIPIILGGSVVIENVFAWPGMGQLSVKAVLEQDFPM
                     IQAYVLIVSVLFILFNTLADVINMWLNPKLREEH"
     gene            6934..7797
                     /locus_tag="PTC28_001727"
     CDS             6934..7797
                     /locus_tag="PTC28_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDK5717007.1"
                     /translation="MIVFQRLLNDNGAKWALAIIAVYILLGVFAPIVTPYDPNTVNID
                     DKFAGMSFAHWLGTDHLGRDILTRLIFAIRPSFLLILFALACSVLIGTLLGFISGYFG
                     RWVDALVMRICDVMLSFPTYVMTLALIGVLGIGLKSIIVALIITRWAWFCRIIRTSVM
                     QYRNSDDVKFARTIGLSHARIIMTHILPRTLADIAIISTSSMVSMILQISGFSFLGLG
                     VKAPTAEWGMMMNEARKVMFSHPELMFAPGIAIIVIVLAVNFLSDALQIAIDPKLSQQ
                     QMKQRIKKGWI"
     gene            7797..8615
                     /locus_tag="PTC28_001728"
     CDS             7797..8615
                     /locus_tag="PTC28_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5717008.1"
                     /translation="MVEQLMRVEDLTLIDGHTNHVLVHHFNLTLHRGEVIAIIGESGS
                     GKSMTCKALLGLNDRNIRMSGEIWFQEEALHNASEADFRKIRGRRIAMIMQQGATAFN
                     PSFTVGAQLTMMLKQHRPMSTQQQKATLQHYFDMLGLRDFERILKSYPHQLSGGMLQR
                     LMIILALALQPDIIIADEPTTALDAITQYEVIEELREVKEKIGCAMIFVSHDLAVVKS
                     IADQVIVMRNGDVVEAGPAHQLFTAPQHAYTQFLIAARDRVTRYYKSLRGDASC"
     gene            8609..9349
                     /locus_tag="PTC28_001729"
     CDS             8609..9349
                     /locus_tag="PTC28_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5717009.1"
                     /translation="MLEVQNVTKSYRSGVKRQKRQIVKQVSFQCSKGQSIAIIGESGS
                     GKSTLARMILGIEKPDTGTVMLDGQPVCQRHTRLGKMSVVFQDYKSSLHPYFNVRQIL
                     NEALSQCDTPVDDKEAHMTALLERVGLSAAFLNKYPQMMSGGEAQRVAIARAVITNPD
                     YIVLDEAISALDMSIQSQILDLLTTLRDKYQLSLIFITHDIQAAVYLCEDLIIFNDGQ
                     IQERLNRHQLKTLQNDYTRELFEKQFMN"
     gene            9361..10551
                     /locus_tag="PTC28_001730"
     CDS             9361..10551
                     /locus_tag="PTC28_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5717010.1"
                     /translation="MKGALAWPFLRLYILALFFFSANAILNVMIPLRGHDLGATNATI
                     GIVMGAYMLTAMLFRPWAGQVIAKVGPIKILRWILIINGFALILYGFTGLEGYFIARV
                     MQGVCTAFFSMSLQIGIIDALPEEDRSQGISLYSLFSYIPGIIGPMIAVGIWQLDNLS
                     YFALTMIIIAITTGVVGFSATLHGHDDADTTPAQQEKMPYGAMTVFLQLFKNPFLLKA
                     GTIMLVASIGFGAVATFIVLYVNKYQVGHASLFLAVQAITVVFARFFLRQYIPSDGRW
                     HVRFMLGVLGLLTVALLFIAIGPYVGGWILYISAVMIGLTQAMMYPTLTSFLSFKLPK
                     VGRNMLLGLFIATADLGVSLGAALMGPIADMVGYANMYLICGILMAFITLMSIERRPQ
                     FIEK"
     gene            complement(10803..11618)
                     /locus_tag="PTC28_001731"
     CDS             complement(10803..11618)
                     /locus_tag="PTC28_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019467708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDK5717011.1"
                     /translation="MTKNQNFIETKEYKRFAEFCDACIKYQYIGICYGQPGVGKTLSS
                     RYYTNWNTIEKQVNHRGWEDLASKTTDDILSVNKIFYTAPAEKQTRLSNDLYSISASI
                     DLGQKLHIVNKYGHDHSKHYSDMFKYIDLIIVDEIDRLKVQHLEQLRAIYDEHNLAMI
                     FIGMPGIEKKLSRYPQLYSRIGFAHEFDNLSKDETHHILEYKWQDLGFDLKLEDFTDY
                     EAITTIIKITKGNFRLIHRLFAQIDRIMDINGLDKISTEVVETARDSLVIGIR"
     gene            complement(11611..>12498)
                     /locus_tag="PTC28_001732"
     CDS             complement(11611..>12498)
                     /locus_tag="PTC28_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000790716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDK5717012.1"
                     /translation="LTIIMDDYSRAIAGYFISFDAPNAQNTALTLHQAIWNKNNTNWP
                     VCGIPEKFYTDHGSDFTSHHMEQVAIDLKINLMFSKVGVPRGRGKIERFFQTVNQTFL
                     EQLPGYINNNDTSSDLIDFQNFEEKLRYFLIEDYNQKEHSAIQSTPINRWNSNHFFPN
                     MPSSLEQLDLLLLEIPKSRKIHSDGIHFQGFRYSNTNLTAYVGEYVLIRYNPNDMAEI
                     RVFYRDEFLCTAISPDLADYSIDIKEIQHARSQRRKHLKQNIASPSTTDLIKEEKSYG
                     YSPQETTKNVKKLKRYRND"
BASE COUNT         3991 a         2140 c         2559 g         3808 t
ORIGIN      
        1 ttgctataaa atatgtatat ttactacata tatttttcta taagtctatg gacctattgt
       61 gtatagaaaa atatttgata tatttataag tagatagtaa aaaatgtgct taaatgaggt
      121 gttgaatatg aaaagattag cttttgcgct ctttgctttt ttacttttat tagctggttg
      181 tggggataaa gattcaaaaa aagaagaaca atcatcgaca caaaatgata agacagaaaa
      241 aacggcaaaa caacaagaaa aaacgttaga gaataataag aaagaagtgg cagacacaac
      301 caatgagtca cagcaaacag aaaataaagg aatcgataaa gatactaaaa acaatcagca
      361 agagacaaaa cagaagaatg tacaaaatca aagcactgat aaacaagcta atgtgagtca
      421 ttcaccttct catgagacaa agaaagattt gaacgaagca tctagaattg cactcgtatt
      481 ttttggcaat gatatccaac actatacaat aacgaagtca gaaattctaa aaggtcaata
      541 tgaatatcaa ggtgctggga tgaccactac aaagaatgtt aatcaattaa cattaatcca
      601 tcaaagagac atacctaacg cgccatcagg tatgaagttt tatactttag atcctccaaa
      661 aggaaatttt gcgacaatta ttggtgtaaa tcaaaacaaa gtatttgtag gtgggacaca
      721 aggtgcgttg gtagattacc aagagttgct cactacaggt aaagaaatga atttacaaag
      781 tttgtacgaa gcatataaaa atgatccagc atatacgagt attctaaata agattaaaat
      841 agtaaattaa tagtatgtat atattaaaac gggctgtgaa aatatccatc acaaaagatg
      901 atttcacagc tcgttttaat gtgtttttac atgttcaaac acagcttctg ttaatgtttc
      961 gcaacgattt taaaaatgta tcttaaatta tgatgattca gcggtctttg tacgatgaca
     1021 tcattacaat ggctgactat taataggaat ttttagaagt agatatttag agatgaaaat
     1081 ggataataaa aagtaaagtt ttgataatga ttatcattgt tgacatttca aaaatttgag
     1141 agtaggatat ttttaaatcg ttatgattac gatttgtaat taatgatatt tattttaaaa
     1201 ggagatggaa taaaattgga aattgttcat ttttcaaaat tcaatccatc tggaaatatg
     1261 actgttttag tggattcaca acatgaccct agccaatata ggcacatcgc ccagcaactt
     1321 atgaaaagtt cacatgtggg ttgtgaacaa gtcgggttta ttgtagatga tgaaggtgag
     1381 ctaccacatc aacttgtgat gagtggccaa gaattttgcg ggaatgggac tttgtcattt
     1441 attcgttatt tgaaggatag aaatttacta acgacgtcct cttttaaatt gaaggtatcc
     1501 ggaatggaca cgcctgttca ttgtgcgata catgaaacac ctcaacaatt tgaaacgacg
     1561 ctcccacaac caaaaaaaat attagaaaga caatataaga ttgatgatgt cttgtttgaa
     1621 gggttggaaa ttcaatatga tacatatcaa cactttgtat tcccaattac agtgtggtca
     1681 gaaaagctag cctcctctat cgaatcattt gttagagccg aagaatggcc agaacatctg
     1741 acggctgttg ggttgatgtt atatgataca ctgcatcagc gcttgtatcc cctcatctat
     1801 gtgccacaga tagatagcat catatgggag caaagttgtg ggtcaggaac gggttcggta
     1861 ggtgtctatg aagcgtatca aaaccagtta gaacatttag aaaaagaaat tgtacaacct
     1921 ggaggtgcgt tgactgccat tgttgatcac aatgatgagg gctatcaagt tgcaatcaaa
     1981 ggaaatgttt caacggttgc cacaggttta gcatacatag aataggagta cgtgatgaat
     2041 aaaatacaac agaacacaca tgaaattgaa gcgcaattaa aacattacca acagcaattc
     2101 gaacaccttt atcataacat tcaacaaggc gaacgtgcac ttaatgattt ggaacgctta
     2161 attgatgaat atagcagtta tatattggat gaacagccca agcaacagta tgagcattgg
     2221 cggagtcaga ctacagaaca gcagcatctt attaaaccac tagcagatat tactgcaaaa
     2281 tgcgttaaat tgatggagtc ctctcgagca cgccgtttga ttcatggtga gcatgggacg
     2341 acaggatatt ttgacaatat tgaacattgc atttcggaag aatttggaca gtttgaaatt
     2401 acatgtgaag atacagtgct attagtagga tcaggtgcgt accctatgac tttagttcaa
     2461 attgcaaaag aaacaggcgc acgtgtcatt ggaattgata ttgatgaaga agcggtgcgc
     2521 tatggacaac aagtcattcg cattttagcc ccagatgcgc caatagaaat acatcaagca
     2581 acagtatccg aactagaagg aattcaaaat gtcacacatg tcatcttcag ctcaacggtc
     2641 gaaatgaaat acgacatttt agaagaactt tatcacctta ccggtcatga cattgtggtg
     2701 tctatgcgtt atggtgatgg cttgaaatct atatttaatt atcctaaaca agagacacat
     2761 ccgcagcagt ggacttttgt agatgacatt acacgtccgg atcaaatctt tgatattgca
     2821 ctctaccaaa aaaaatcaga agggcgtgca taataatgaa aaaatctgtc ttaattgcag
     2881 ggacaggtcc ggtcgccgtg cagcttgcag tgttattcaa gacctataca acacatcatg
     2941 tagatatggt ggggcgaagt gacgtttcag caaaggcaca acagttttgg caagcatacc
     3001 aaaatgcaca gcaacttgaa gtacaagttc aaaatgactt gcatatggcg ttagcaggta
     3061 ctgcaacact tggacgattg tatgagcttt atgaagcagt cgagccacat tatgatgtgc
     3121 tcgtgcttgc atgtactgcc gatgcataca gtcaggttat acaacagttg tctccagctg
     3181 tacgtcaaca actcaaacat gtcgtgcttg tttctcctac gtttggttct catatggtcg
     3241 tccaacagca gtttagtgca gaacagccga atattgaagt gatttcattt tctacatatt
     3301 taggtgatac gactgtatcg catcctgaaa caccacatcg tgtactgaca aaaggaataa
     3361 aaaaacattt gtatatcggt acaatatatg aacaatctga cttttcccag gaaataatag
     3421 atttgttatc tgaagttcaa attccagtga cgcaagttgc ccatccactc atggcagagt
     3481 cgcgaaacag ctcactttat gtgcatccag cgttatttat gaataaacat gctttgaaag
     3541 cagtgtttga aggaatgacc gtaccatttt atgtatacaa attatttcca gaaggtccta
     3601 ttacgatgca gttaatcgct gaaatgcgac aaatgtggca agaagttatg gcgatattga
     3661 aacatttaaa tatcgatacg ttaaatctat tgaaatttat ggtgaaagaa aattaccccc
     3721 ttcgccctga aacgatggat gatgatcgga ttgaagcgtt tgaaacactt tcagccatcg
     3781 agcaagaata tttattatac gtacgttata ccggtatttt aattgatccg ttttcagagc
     3841 cagatgaaaa tggtaagtat tttgattttt cagcagttcc ttttaaagaa gtttttcgaa
     3901 atgaggaagg tgtttggcaa attcctcgca tgccgaacga agactattac cgtacacaaa
     3961 tgatgcgagg tatagcacaa gcattgaaca tctccacgcc aatgatggat acattgattc
     4021 aacgctatga agcacaactg acggcatttc aaaaagcaca tcctaatgat cgtgtatcca
     4081 cgcaatttca aatacagtcg ttcgaggaag atatcaacag tatcgctaaa ttattgaact
     4141 ctgaaggata aagggaatgt gttaagttca ttgattggat gaaactccat tttgagaacc
     4201 agtaaaatga ctgtgaaaca aaattcaact atgaagtgac tggattgata aaagtgttca
     4261 aggtgggtca tcatgagtac ccattgacac tgatatttat acgctaaaga aaatcaagca
     4321 aatttaacaa tgtgtactaa aaatgctagc actactgaaa gaaatgagat aaagagagga
     4381 tatgaatgat gatgaaaaat ttaaagtgga ttgccgtaag tatagtaatg ttacttgtac
     4441 ttgcagcctg tggtaactct aaagcattag agcagaaaaa agaagataaa aatcttacat
     4501 atgccacatc gaaagatatt ggggatatga acccgcatgt atacggtggg tcaatgtcag
     4561 cacaaggtat ggtctatgaa tcattagttg atcatacaca aaaagggatt gaaccgttat
     4621 tagctgaatc ttgggacgta tcggaagatg gaaaaaccta cacatttcac ttaagaaaag
     4681 gtgtaaaatt ccaagatggg acaccgttta atgcagacgc cgtgaaaaag aactttgatg
     4741 ctattcaagc aaatcaaaaa ttacattctt ggattaaatt atcaacatta atcgaccgta
     4801 cagaagcaaa agatgatcat acctttgtga tgactttgaa ggagccatac aacgcaacgt
     4861 tggaagaact agccatgaca cgaccttacg tttttgtctc accaaaatca tttaaagcag
     4921 agggtacaaa agatggtttg aaatcttatg ttggtacagg tccatatcaa ttaaagtcac
     4981 atgataaaga tgagcaagcg acatttgaac gtaatgaaga ttattggggt ggcaaaccac
     5041 atttgaaaac gatagtcgct aaagtattac cagcaggtga aacatcattt ttagcgttac
     5101 aaaaaggtga agtgaacttt gcgtttacgg atgaccgtgg tacagataac atcgacaatg
     5161 aagcaatgaa aaaattaaca gacaatggcg atttccaatt gaagcgcagt caaccgatga
     5221 atacgaaaat gattgttgca aactctggta aaaaagacag ccctgcacaa gataaagcgg
     5281 tgcgtgaagc attgtggtat agcgtcgatc aaaagcgtat tgcggacaaa attttagagg
     5341 gtactgaaaa gcctgcgtca caattattct cgaaaaacgt gccgcatgcg aacattgatt
     5401 taccaaaacg tgattttgat ttgaaaaaag cagcggcgct attagacgaa gcgggatgga
     5461 agcaaaatga caaaggtgaa gtgcgtgaaa aagacggtca aaagcttgag atgacgttat
     5521 attacgacaa ccattcaagc tcgcaaaaac aagaagctga atttattcaa gcgaaagcga
     5581 aagaaattgg tatggcattg aaaattgtag gagaaacatc tgataaagtg gcagagcgcc
     5641 gtacatcagg tgattatgac ttactgttta accaaacatg gggtcttcag tatgatccac
     5701 aaagcacgat ttctggcttt aaagcagata caggttataa agcagccgtt tcaggtatca
     5761 aagaaaaaga ccaactgttt gatgacattg atacagcttt aaaaacacaa gatgcaaaag
     5821 agcaagacca aaagtataaa gacattttaa caacagtaca tgatgaagca atctttattc
     5881 cgatttctca cggaggtatg acagttgtcg ctccgaaaga tttagaacat atttcattta
     5941 aacaatcaca atacgaattg ccatttgaac aaatggatta caaataaggt ggtccatcaa
     6001 tggcatatag tgcgatgaaa cgtttgttac tgatgatacc gttgttgatt gtcattagct
     6061 ttttgacttt tgcattaacg catttatcta gtgaagatcc agccgtcgtc attctacatg
     6121 cacaagaagt accagatatt acgcaaagtt taattgaaca aacacgtgcc aagtactatt
     6181 tagatgcgcc gttcctcgta caatactggg aatggctgca atccgcggta cagctacaat
     6241 ttggacatag tttcgtaact ggcgaagatg tcggtttgag actatggcct gcatttttta
     6301 atacattgaa gttaacattg atttcaagtg tggcgattat tgtgttgtcg ctgttgtttg
     6361 gtattttgac agcattgttg cgtgggacat ggtttgatcg tatgacacgg acgacagctt
     6421 tcgtattaac cgcgattcca tcttattggc tagcggcgat attgattatt tttctatcag
     6481 ttaaattgaa tgcattaccg acgtcgggat taacaggtcc tgaaagctat attttacctg
     6541 ttgcggtgat cacgcttggt tataccggca tttattttag aaatgtcaga agtgcggtca
     6601 ttcagcaact tgatcaagat tatgtgctct atatgcgagc gatgggtgtg ccgatgtcgc
     6661 aactgctcgt ttatgtggca cgtaatgcaa tgcaagtcgt cgtttctatt ttttgtatgt
     6721 cgattcctat tattttaggc ggttctgtcg tcatcgaaaa tgtatttgcg tggccgggta
     6781 tgggtcaact gagtgtcaaa gccgtgttgg aacaagattt tccaatgatt caagcatatg
     6841 ttcttatcgt ttcggtacta tttatcttat ttaatacatt ggcagacgtc attaatatgt
     6901 ggctgaaccc gaaattaagg gaggagcatt aagatgattg ttttccaaag attattaaat
     6961 gataatggcg caaaatgggc gttggcaatc attgctgttt atattttact cggggtattc
     7021 gcgccgattg taacgcctta tgaccccaat acagtgaata tcgatgacaa atttgccggc
     7081 atgtcatttg cacattggct tggtacggac catttaggtc gagatatttt aacacgcttg
     7141 atttttgcga tacgtccgag ctttttgctt atcttgtttg cgttagcgtg ttcggtgttg
     7201 atagggacgc tactcggctt catctcaggc tactttgggc gctgggtgga tgcactcgtg
     7261 atgcgtattt gcgatgtgat gttatcgttt cctacatatg ttatgacgct cgctttgatc
     7321 ggtgtactcg gcattgggtt aaaaagtatt atcgttgcac tgatcattac gcgctgggca
     7381 tggttttgcc gaattatccg cacaagtgtg atgcaatatc gcaattcaga tgatgtgaaa
     7441 tttgcacgta cgattggtct gtcacacgct cggattatta tgacacacat tttgccgcga
     7501 actttagcag atattgcgat catttcaacg agttcgatgg tgtcgatgat cttacaaatt
     7561 tcaggatttt catttttagg actcggcgtt aaagcaccga cagcagaatg ggggatgatg
     7621 atgaatgaag cacgtaaagt gatgttcagt caccctgagt tgatgtttgc gccaggtatt
     7681 gcgattatcg tcattgtgtt agcggtgaac tttttatccg atgcgctcca aattgcgatt
     7741 gatccaaaat tgtcacaaca acaaatgaag caacgcatta agaaagggtg gatataatgg
     7801 tagaacaatt gatgcgtgta gaagatttaa cactcattga tggtcatacg aaccatgtcc
     7861 tcgtccacca ctttaatttg acgttacatc gtggtgaggt cattgcgatt atcggtgaaa
     7921 gtggcagtgg taaatcgatg acgtgtaaag cattactggg attgaacgac cgtaatattc
     7981 gaatgagcgg tgaaatttgg ttccaagaag aggcgcttca taatgcgtct gaagcggact
     8041 ttcgaaaaat cagaggccga cgtattgcaa tgattatgca acaaggtgcg acagcgttta
     8101 acccttcttt tacagttggt gcacagttga cgatgatgtt gaaacagcac cgtcctatgt
     8161 cgacacaaca acagaaggcg acgttacaac attacttcga catgcttggt ttacgagatt
     8221 ttgagcgtat tttaaaatca tatccgcatc aattgtcagg aggcatgttg caacggttaa
     8281 tgattatatt agcactcgca ctccaaccgg acatcattat tgcggatgag ccgactacag
     8341 cactcgatgc cattacacag tatgaagtca ttgaagaatt acgtgaggtc aaagaaaaaa
     8401 tcggttgtgc catgattttt gtctctcatg acttagcagt tgtaaagtcg attgcagatc
     8461 aggttattgt gatgcgtaat ggtgatgtcg ttgaagcagg accagcacat caattattca
     8521 cagcaccgca acatgcgtac actcaatttt tgattgcagc acgagatcgt gtgacacgtt
     8581 attacaaatc attgcgaggt gatgcgtcat gttagaagtt caaaacgtca cgaaatctta
     8641 tcgtagtggt gtgaagaggc aaaaacgaca aatcgtgaaa caagtcagtt ttcaatgcag
     8701 taaaggacaa agtatagcga ttattggaga aagtggtagt ggtaaatcca cattggcgcg
     8761 tatgatatta ggtattgaaa agccagatac aggaactgtg atgttggatg gacaaccggt
     8821 ctgtcaacgt catacccgtc ttgggaaaat gagcgtcgtg tttcaagatt acaagtcttc
     8881 actgcatccc tatttcaatg ttcgtcaaat tttaaacgag gcacttagtc aatgcgatac
     8941 accggttgac gataaagaag cgcatatgac tgctttgctc gaacgtgtcg ggttaagtgc
     9001 agccttttta aataaatatc ctcagatgat gtcaggagga gaagcgcaac gtgtcgctat
     9061 tgcaagagcg gtcattacga atccagacta cattgtgtta gatgaagcga ttagtgcgct
     9121 cgacatgtcg attcagtcgc aaattctaga tttattaacg acactgagag ataaatatca
     9181 gctcagtttg attttcatta cacatgatat tcaagcggcg gtctatttat gtgaagattt
     9241 gatcattttt aatgacggtc aaattcaaga gcgactcaat agacaccagt tgaaaacgct
     9301 tcaaaatgat tatacgcgtg aactttttga aaaacaattt atgaattagg aggctttgat
     9361 atgaaaggtg cactcgcttg gccttttttg agattgtata ttctcgcgct atttttcttt
     9421 agtgcgaatg ctattttaaa tgtcatgatc ccgttacgcg gacatgattt aggtgcaacc
     9481 aatgcgacca ttggtattgt catgggggca tacatgttga ctgccatgct ttttcgtcca
     9541 tgggcagggc aagttatcgc caaagtcggt cccattaaaa tattaagatg gatattaatt
     9601 attaatggtt ttgcactgat cttatatgga tttacaggtt tagaaggtta ctttattgca
     9661 cgtgtgatgc aaggtgtatg tacagccttt ttctctatgt cattacaaat cgggattatc
     9721 gatgcgttac ctgaagagga tcgttcacaa ggtatttcct tatactcact cttttcttac
     9781 ataccaggca ttatcggacc aatgattgca gtggggattt ggcaattgga taacttgagt
     9841 tatttcgcat tgacgatgat cattatcgcg attacgacag gtgtggtcgg tttcagtgcg
     9901 acgcttcatg gacatgatga tgcagacacg actcctgcgc aacaagaaaa gatgccatat
     9961 ggtgcgatga cagtgttctt gcagttattt aaaaatccgt ttttattaaa agctgggacg
    10021 attatgcttg ttgcctcaat tggatttggt gcagtggcaa cgtttatcgt gttgtatgtc
    10081 aataagtatc aagtcggtca cgcgagttta tttttagctg tacaagccat tacggttgta
    10141 tttgcacgtt tctttttacg tcaatacatt ccttcagatg gacgctggca cgttcggttt
    10201 atgttaggtg tcctcggatt attaactgtc gcgctgttat tcattgcaat cggtccttat
    10261 gtcggcggat ggatacttta tatcagtgct gttatgattg gtttgacgca agcgatgatg
    10321 tatccgacat taacttcatt tttaagcttt aaattaccga aagttggacg aaatatgtta
    10381 ctcggtctct ttatcgcaac agctgactta ggtgtttcac tcggggctgc attaatgggg
    10441 cctatagcag atatggttgg ctatgcaaat atgtatctca tttgtggtat tttaatggca
    10501 ttcattacac tgatgagtat tgagagaaga ccgcagttta tagaaaaata acgtagaaaa
    10561 tgaacaggct agggtgcatt tcaaagtttc ctagcctgtt ttcaattgaa aaaataaatt
    10621 ttaaaggtaa agaaatatct taataaaaca gtattagtga caaagccttg agtttcgaaa
    10681 tatattttaa taacagaaaa tatacacaag tggttattgt tactttactt gatatatgag
    10741 aatgatttta cctagtaaat gagaaaagca atgtcctata ttaaagtaca ttgctttttc
    10801 tattaacgaa tacctatgac taaactatct ctagctgttt ctacaacttc tgtactgatt
    10861 ttatctaagc catttatatc cataattcta tctatctgtg caaataaacg atgaatcagc
    10921 ctaaaattcc cttttgtaat tttaataatc gtcgttattg cctcataatc agtaaaatct
    10981 tcgagtttta gatcaaatcc taaatcttgc cacttatatt ctaatatatg atgcgtctcg
    11041 tctttactta gattatcaaa ttcatgtgca aaacctatac gcgaatatag ttgaggataa
    11101 cgagatagtt ttttctctat acctggcata ccaataaata tcattgctaa attatgttca
    11161 tcataaatag ctcttaattg ctctaaatgt tgcactttaa ggcgatcaat ctcatctact
    11221 ataattaaat caatatattt aaacatatca ctataatgtt tactatgatc atgaccatac
    11281 ttatttacga tgtgtaattt ttgacccaaa tcaatacttg cactaatact atatagatca
    11341 ttacttaatc ttgtttgttt ttcagccggt gcagtataaa atatcttatt caccgataat
    11401 atatcatcag tcgttttact agctagatct tcccaccctc tatgattaac ttgcttttca
    11461 atagtattcc aatttgtgta atacctagaa gataaagttt ttccgacacc aggttgacca
    11521 tagcagatcc caatatattg atatttgata caagcatcgc aaaattcagc aaatcgttta
    11581 tactctttcg tttcaatgaa attctgattt ttagtcatta cgatacctct ttaatttttt
    11641 gacgtttttg gtcgtttctt gaggtgagta accataactt ttttcttcct taattaaatc
    11701 agtggtgctt ggactagcaa tgttttgttt taagtgtttt cttctctgac tacgtgcgtg
    11761 ttgtatctct tttatatcaa ttgaataatc agctaaatca ggggatattg ctgtacaaag
    11821 aaattcatct ctataaaaaa cgcgtatttc agccatatca ttgggattgt aacgaattaa
    11881 tacatactca cctacataag cagttaggtt tgtattactg tatctaaagc cttgaaaatg
    11941 aataccatct gaatgaattt ttctagattt aggtatttct aataataata aatcaagttg
    12001 ttctaaactg cttggcatat taggaaaaaa atgattactg ttccaccgat tgataggagt
    12061 gctctggata gcactgtgct ctttttgatt ataatcttca attaaaaagt atcgtaattt
    12121 ttcttcgaaa ttttgaaaat ctattaaatc gctagaagta tcattattgt ttatatatcc
    12181 aggaagttgt tctaagaaag tttggttaac tgtctgaaaa aaccgttcta ttttcccgcg
    12241 accacgaggg acaccaactt ttgaaaacat caagttaatt ttcaaatcaa tagcgacttg
    12301 ttccatgtgg tgcgaggtaa agtcactccc gtgatctgtg tagaattttt cgggtatacc
    12361 acatactggc caattggtat tattcttatt ccatattgct tggtgtagtg ttaatgctgt
    12421 gttttgagca ttaggagcat caaaacttat aaagtagcct gcaattgcac gactatagtc
    12481 atccataata atggttag
//
LOCUS       DANHPA010000078        12247 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.078, whole genome shotgun sequence.
ACCESSION   DANHPA010000078 DANHPA010000000
VERSION     DANHPA010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 12247)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12247)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12247
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.078"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            677..2107
                     /gene="nhaC"
                     /locus_tag="PTC28_001733"
     CDS             677..2107
                     /gene="nhaC"
                     /locus_tag="PTC28_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HDK5717013.1"
                     /translation="MEKKVKFKKDINVWYALLTLTIMISAMLYTVVKLQQPPHLPLLI
                     GTSVAIIITMAHGYRWEEVEEMMYKGIRHALPAVVIIMLVGLIIGAWIGSGVVAAMIY
                     YGLKLISPTYFLAVVVVICGIVSLAIGSSWSTMATVGVASMGIGMSMSLSPGMVAGAV
                     ISGSYFGDKMSPLSDTTNLASGLTNVDLFEHIRHMFYTTIPGLVISLIIFFVMGQMYG
                     SDHLEQQKIDTIMNGIQDAFVISPWLLLIPLIVIIAVAFRVPAIPAIVLGIVLGYFTQ
                     IFVQGDTLVNAVKVLQTGFTIDSGNKTIDELFNRGGLESMFYTISLTLVAMTFGGLLE
                     YSGMLKALISVVLKFAKNTGSLIASVIISCVGTNLSCSEQYISIIVPSRMYVATFIDK
                     GLHPKNLSRALEDGGTLTSVFVPWNTCGVFIFTTLGVSVSQYGAFAILNFIVPIISII
                     YGFTGFKIDKLSPAEKTYYQQQEATN"
     gene            2172..2576
                     /locus_tag="PTC28_001734"
     CDS             2172..2576
                     /locus_tag="PTC28_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF393 domain-containing protein"
                     /protein_id="HDK5717014.1"
                     /translation="MPIVYYDDRCIYCYNYAIWLIRHGLSRSYQFVPLKSPAGEALKK
                     AHPEVLEYNSVVLQEGDHLTFQSTAIAKLIFTLDGYKWLAALLWLVPKPLRNLGYQLF
                     ADNRDKMWKTTWAKANAYEQSFFKQTQVPTKE"
     gene            complement(2806..3516)
                     /gene="deoD"
                     /locus_tag="PTC28_001735"
     CDS             complement(2806..3516)
                     /gene="deoD"
                     /locus_tag="PTC28_001735"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDK5717015.1"
                     /translation="MTQGTPHIQPNGKKIAKTVLMPGDPLRAKFIAENFLENVEQFND
                     VRNMFGYTGTYKGKEISVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGAMQEDIQ
                     LYDIIIGQGASTNSDYVDQFQIPGHFSPLADFDLVVKAKEKADAIGARAHVGNILSSD
                     TFYNANPDFNQKWIEMGILGVEMESAGLYLNATKAGKKALGIFTVSDHLLRDEATTAE
                     ERQNSFTQMMEVALEIAE"
     gene            3732..5033
                     /locus_tag="PTC28_001736"
     CDS             3732..5033
                     /locus_tag="PTC28_001736"
                     /EC_number="2.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine-nucleoside phosphorylase"
                     /protein_id="HDK5717016.1"
                     /translation="MRMVDIIAKKRDGHALTKEEIEFVVNGYTNDDIPDYQMSSLAMA
                     IFFQDMTDEERAYLTMAMVESGDQIDLSNIEGIKVDKHSTGGVGDTTTLVLAPLVAAL
                     DVPVAKMSGRGLGHTGGTIDKLESVEGFHVEISEEAFVKLVNEDKVAVIGQTGNLTPA
                     DKKIYALRDVTATVNSIPLIASSIMSKKIAAGADAIVLDVKTGNGAFMKTVDDAEQLA
                     HAMVKIGNQVGRQTMAIISDMSQPLGRAIGNALELQEAIDTLKGEGPEDLTELVLTLG
                     SQMVVLAQKAKDLDEARGMLQEVIDNGKALEKFKTFLSNQGGDASVVDEPSKLPTAQY
                     QFELPAKRSGVVSEMIANEIGIASMMLGAGRQTKEDVIDLAVGLVLNKKVGDRVEEGE
                     SLLTIYANSEDVEQVKQKLYDNITISDHAEQPQLIHTIITE"
     gene            5045..5398
                     /locus_tag="PTC28_001737"
     CDS             5045..5398
                     /locus_tag="PTC28_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717017.1"
                     /translation="MKQLGRIVLGLAFMAIGVLHFTKERQFRNIVPTYLPLRKTAVLV
                     TGVCEIVIGALLVLRRPSDALKNWINAFLLAVFPANIYMARKKLPLGDKPLSDTARYG
                     RLPMQFVLMYIIKKL"
     gene            complement(5460..5930)
                     /locus_tag="PTC28_001738"
     CDS             complement(5460..5930)
                     /locus_tag="PTC28_001738"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HDK5717018.1"
                     /translation="MPKMNVESFNLDHTKVVAPYIRLAGKMQGLNGDDIYKYDIRFKQ
                     PNKEHMEMPGLHSLEHLMAENIRNHSDKVVDLSPMGCQTGFYVSFINHTDYDDVLNIV
                     EQTLQDVLAADEVPACNEVQCGWAASHSLEGAKEIAQAFLDKRDQWHDVFGTGK"
     regulatory      6226..6331
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            6496..7614
                     /locus_tag="PTC28_001739"
     CDS             6496..7614
                     /locus_tag="PTC28_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002492361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallopeptidase"
                     /protein_id="HDK5717019.1"
                     /translation="MSHQIHGRPELGNEEIFASRLLIENLKEHNFEVERDIAGHSTGF
                     IATYDSEIEGPTISYLAEYDALPGLGHACGHNIIGTSSMLAAIALKQVVDDIGGKVIL
                     FGCPAEEGGENGSAKASYVREGLFDDVDVALMIHPGNETYPTIPTLAVDVLDIKFYGQ
                     SAHASENAEEARNALDAMLSYFNGVAQLRQHIKKTERVHGVILDGGQAANIIPDFTHA
                     RFYTRATTRKDLDVLTSRVHDIARGAAIQTGCEFEFEPIQNGVNEFIKSPLLDQLFEH
                     YATELGEEVSHDDFGYGSTDTGNVSHVVPTIHPHVKIGPRSLVGHTHRFREAAASPMG
                     DDALIKGAKMIALMGAKLIQDQTLLAEIQKEHQHKREK"
     gene            7617..8807
                     /locus_tag="PTC28_001740"
     CDS             7617..8807
                     /locus_tag="PTC28_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HDK5717020.1"
                     /translation="MAHNIQYRSQLTMGEIYDTNIVYSSRPSYVSNPWLAPDEHQSNF
                     LTGRELLIAQLPIIVHEASVTDKLQQLFQLIGRDIPENVITFQDQASYEQTLKQLTEE
                     QSRLIYFQYVHGDNIVDAKHYAMDKQLFKDLNNKSLIPKWTGGQYIPKREIVAFQDFK
                     TAVRQWELPLVIKPGDDLPTAGGYGVMICYNEDDLEKAIARVEQAEAATDTLIIEQCV
                     EAVDNYCVQFAWHPEDGIVYLGSAKQLTNAYGFYNGNINAINVPEQVIQAGYEIMDIA
                     VKEGFIGIAGFDLLVDQQGVVYAIDLNFRQNGSTSMLLLKDALTGSYHKFYSYFANGD
                     NERFFEAVRHFVEQGVLYPLSYYDGDWYQEVHVNSRFGCIWHADSPEQIEAYEKQFIA
                     RAGL"
     gene            8924..9595
                     /locus_tag="PTC28_001741"
     CDS             8924..9595
                     /locus_tag="PTC28_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2750 domain-containing protein"
                     /protein_id="HDK5717021.1"
                     /translation="MSYKNERFYKDILTNEQFFIAVKDKKMIKHRHNDKLLFCFWTRE
                     SLAKAYLDNLNIEYDKIKTMDIDRFATYELDEMFDEEDEALVNVTNDAEGHEIKIVEA
                     TNDLMTDLDNIRIREFVQDVAKTDTVYGLSQKGDRQFMIVYDENDNFDQSHFMPVWSL
                     RKRAEKVAEEDFETFELIDVEGEVFADWLDELRDDNRYVAIDVKPGVVGTIVSAQKLA
                     NELTF"
     gene            complement(10005..10802)
                     /gene="coaW"
                     /locus_tag="PTC28_001742"
     CDS             complement(10005..10802)
                     /gene="coaW"
                     /locus_tag="PTC28_001742"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011302660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II pantothenate kinase"
                     /protein_id="HDK5717022.1"
                     /translation="MRIGIDAGGTLIKVVIEQDGERTFKTYPTTSLETVANWLNQQAC
                     EDIHMTGGNAKVLSELLDCEPQLFIEFDAAAKGVQILLEEQNIHIQQYIFTNVGTGTS
                     LHFSDNEGQKRVGGIGTGGGMIQGLGYLLTGITDYQKLTEMAQQGDREIIDLKVKHIY
                     KNDTPPISGELTAANFGHVLLNMDKTFTNADKIASVIGVVGESVTTVAIHVAREHQVE
                     DVVYIGSSFQDNPLLQKVVTDYTILRGFKPHYLQNGAFSGALGSLYL"
BASE COUNT         3931 a         2108 c         2512 g         3696 t
ORIGIN      
        1 tcagagtcat acaaaggtga ctttcatcgt actgcctatt ctaaaacgtt gtaataatag
       61 gtaatgcttc ccagcattaa aaaacaccct cactactcta aaaaacagcg agggtatagg
      121 tgtataaagt gcctacgcgt cttcattaac cctactatag tattgtaatg ttaatgtgtc
      181 gcaaaactat cccaaaatat tattatatgc ctttttggat ttagcgtttt atgcgaatca
      241 cgtgataaac tatccaaaag atgagcaccc aaataaatcc aaaactttta taactacctg
      301 gtaagtaaaa tacagtaagt aaaatcaaag gtacaaaaat aaataagagt ccaaaatata
      361 tcttccaatc tattttgtgt tgacgtgcca ataaatcctc acctcctttg aatagttgtt
      421 tcaattgtat caaagctctc ttaagtgtcc aatgagtaaa aaataaacgt atcattatgc
      481 cttggtgatt agttattaca tctccaacaa cgtttctaac acatttaaaa tgaaaccgct
      541 ttctaaatgg atagaaaaat gtgtataatg atttttaagg aaaagcgaaa aataatattg
      601 aagaatccta gtgcttatcg tagtatattt atacatatta atgaataaat ataatttcga
      661 ggggagaggg attcaaatgg aaaagaaagt caaatttaaa aaagatatca atgtgtggta
      721 cgccttgtta acacttacga ttatgattag tgcgatgcta tacacagtcg ttaagctcca
      781 acagccaccc catctacctt tactgattgg aacatctgtt gcgattatta ttacaatggc
      841 gcacggttat cgttgggaag aagttgaaga aatgatgtat aaagggattc gtcatgcttt
      901 gccagctgtc gtcattatta tgctcgtcgg tttgattatc ggggcatgga ttggcagtgg
      961 tgtcgttgcg gcaatgattt actacggttt aaaattgatt tcccctacat atttcttagc
     1021 tgtggtcgtg gtcatttgtg gtatcgtatc gttagctatt ggtagtagtt ggtctacgat
     1081 ggcgacggtc ggtgtggcat caatgggtat tggtatgagt atgagtttgt caccaggtat
     1141 ggttgcaggt gctgtgatat cgggttcata ttttggtgat aaaatgagcc cactttcaga
     1201 tacgacgaac cttgcttcag ggttaacgaa tgtcgattta tttgaacata ttcgtcatat
     1261 gttttatacg acaattccag gtttggttat ttcattgatt attttctttg tgatgggaca
     1321 aatgtatggc agtgatcact tagaacaaca aaaaattgat acgattatga acggaattca
     1381 agatgcattt gtcatttcac catggttgtt gttaataccc cttattgtca tcattgctgt
     1441 tgctttcaga gtgccagcca ttccagcaat tgttttaggg attgtgttag gatactttac
     1501 gcaaattttt gtacaaggtg atacactcgt taacgcggta aaagtgttac agacaggctt
     1561 tacaatcgat tcaggtaata aaacgattga cgaactgttt aatcgtgggg gcctcgaatc
     1621 aatgttctat acgatttcac tgacattggt tgcgatgacg ttcggtggct tactggaata
     1681 ttctggcatg ttaaaagcgc tgatttctgt cgtattaaag tttgcgaaaa atacaggttc
     1741 attgattgca tctgtcatca tttcatgtgt agggacaaac ttatcttgtt ctgaacaata
     1801 tatttctatt atcgtgccgt ctcggatgta tgtcgcaaca tttattgata aaggactcca
     1861 ccctaaaaat ttgtcgcgtg ctttagaaga tggcggaacg ttgacatctg tatttgtccc
     1921 ttggaatacg tgtggtgtgt ttatctttac tacattaggt gtgtctgtca gtcaatatgg
     1981 cgcatttgcg atattgaatt ttattgtgcc aattatttcg attatttacg gctttacagg
     2041 ttttaaaatt gataaattat caccagctga aaaaacgtat tatcaacaac aagaagcaac
     2101 aaattaagca aacactgcaa aatgataaat ataatgaaaa atgggtataa taactagaaa
     2161 gaggtgatga tatgccaatc gtttattacg atgatcgttg tatttattgt tataattatg
     2221 ccatttggtt aatacgtcac ggactttcta gaagttatca gtttgtgccg ttaaaaagtc
     2281 cagcagggga ggcgttgaaa aaagcgcacc ctgaagtgtt ggaatataat agtgtggttc
     2341 tccaagaagg ggaccatctc acatttcaat ctacagcgat tgcgaaattg atttttacgt
     2401 tagatggtta taaatggtta gctgcattac tgtggctcgt tccaaaaccg ttgcgtaatt
     2461 taggatatca attgtttgcg gataaccgtg ataaaatgtg gaaaacgact tgggccaaag
     2521 ccaatgccta tgagcagtcc ttttttaaac aaacccaagt tcctacaaaa gaataactca
     2581 acgtgcaaaa accccgataa cggctgtaat ggttatcggg gctattttca tttctgttta
     2641 tgttggcatt agataacaaa agtaatggtt gcgtaattag ctcgaaagga aagcccctca
     2701 tagcaattgt gcaactttca aaagggttat ccatgagaaa tctttgccat taaatgaata
     2761 cgcactaaaa caatgaaaat tttagttcca tgccttgttt catcattatt cagcgatttc
     2821 taatgcgact tccatcattt gtgtaaatga attttgacgt tcttctgctg ttgttgcttc
     2881 atcgcgaagt aaatggtcac tcactgtgaa aatacccaat gcttttttgc ctgctttagt
     2941 cgcatttaaa tataaacctg cagattccat ttcaacacct aaaatgccca tttcaatcca
     3001 tttttggttg aagtctgggt tcgcattgta gaatgtgtct gacgataaaa tgttacctac
     3061 gtgggcacgc gcaccaattg catctgcttt ttctttcgct ttcacgacta aatcaaagtc
     3121 agcgagtggt gagaagtgac ctggaatttg gaattgatca acgtaatcag agtttgtgga
     3181 tgccccttgg ccgataataa tatcgtaaag ttgaatatct tcttgcattg cgccacaaga
     3241 accgatacga ataatcgtgt ctacatcaaa gaaattgtat agctcgtatg aataaatacc
     3301 gatacttgga atccccatac ctgatcccat aacagagatt tctttgcctt tatatgtacc
     3361 tgtatagcca aacatgttac gtacgtcgtt aaactgctca acgttttcta aaaagttttc
     3421 agcaataaac tttgcacgta atggatcacc tggcattaag acagtttttg caattttttt
     3481 accattaggt tgaatgtgtg gtgtgccttg agtcatctaa aacatctcct taattcgtta
     3541 ttatcacttt aaagataaca gatgtatcgt taaatgtcga cgaagttttg aagggacaca
     3601 tgaatgaaag ttgatgaatt gacaaataat gaggaattct ttcgtttcac caatcgcaga
     3661 cattcgtata taataaaagc gtatacaaca atatggtaac tataaaatga tatagaaaag
     3721 agggaatagc catgagaatg gtggatatta ttgctaaaaa aagggatggg catgctttaa
     3781 cgaaagaaga aattgaattt gttgtcaatg gttatacaaa tgatgacatt cctgattatc
     3841 aaatgtctag tttagcaatg gcaatttttt tccaagatat gactgatgaa gaacgtgcat
     3901 acttaacaat ggcaatggtg gaatcaggtg accaaatcga cctttctaac attgaaggga
     3961 ttaaagtcga caagcactca actggtggtg taggtgacac aacgacactt gttcttgcgc
     4021 cattagttgc agcattagat gtccctgttg cgaaaatgag tggtcgtggt ttaggccata
     4081 ctggtggaac gatagataaa ttagaatcag tagaaggctt ccatgttgaa atttcagaag
     4141 aagcgttcgt gaagctagtg aatgaagata aagtggcggt tatcggtcaa acaggtaatt
     4201 taacgcctgc agacaaaaag atttatgcgc ttcgtgatgt cactgcgaca gtaaactcta
     4261 ttccattaat tgcgtcatcg attatgagta aaaaaattgc tgccggcgct gatgcaatcg
     4321 tattagacgt taaaacaggt aacggcgcat ttatgaaaac agttgatgat gctgagcaat
     4381 tggcacatgc aatggttaaa attggtaacc aagttggacg tcaaacgatg gcgattattt
     4441 ctgatatgag tcagccactc ggtcgtgcga ttggtaatgc gcttgaatta caagaagcga
     4501 tcgatacatt gaaaggtgaa ggtcctgaag atttaacaga acttgtatta actttaggtt
     4561 ctcaaatggt cgtacttgct caaaaagcga aagatttaga tgaagcacgt ggtatgttac
     4621 aagaagtgat tgataacggt aaggcgcttg aaaaattcaa aacgttttta agcaaccaag
     4681 gtggagacgc atctgttgtc gatgagccat caaaattacc tacagcacaa tatcaattcg
     4741 aattaccagc aaaacgaagc ggtgttgttt cagaaatgat tgccaatgaa atcggtattg
     4801 cttccatgat gttaggtgca ggtcgtcaaa caaaagaaga tgtcattgac ttagcagtag
     4861 gtcttgtatt gaataaaaaa gtcggtgatc gtgttgaaga aggcgaatca ttattgacaa
     4921 tttatgcgaa tagtgaagat gtagaacaag tcaaacaaaa attgtatgat aacattacga
     4981 tttcagacca cgcagaacag ccacagctta ttcatacaat cattactgaa taaagggtga
     5041 taggatgaaa caattaggtc gcattgtatt aggtctcgca tttatggcta ttggtgtctt
     5101 gcatttcacg aaagagcgcc aatttagaaa tattgtgcca acgtatttac ctttacgtaa
     5161 gacagctgta cttgtgacag gagtgtgcga aattgtgatt ggtgcgttat tagtgttgcg
     5221 acgcccgtca gacgcattga aaaattggat taatgcattt ttacttgccg tttttccagc
     5281 caacatttac atggcacgta aaaaattgcc gttaggtgac aaaccattat cagatactgc
     5341 gagatatgga cgtctcccaa tgcaatttgt actcatgtat atcattaaga aattataatg
     5401 aaaaataaac cgaggaacca cacattgaaa gtcgtgtcgt tgctcggttt tttgaatgtt
     5461 tatttacctg taccaaagac atcatgccat tggtcgcgtt tatctaaaaa ggcttgtgcg
     5521 atttcttttg cgccttctaa tgaatgtgaa gcagcccaac cgcattgtac ttcattgcac
     5581 gcagggactt catcagcggc taaaacatct tgtaacgttt gttcgacaat gtttaataca
     5641 tcatcataat cggtatggtt aatgaaagag acgtagaacc ctgtttgaca acccattgga
     5701 cttaaatcga caaccttgtc tgaatggtta cgaatgtttt cagccattaa atgttctaaa
     5761 gaatggagcc caggcatttc catatgttct ttgttcggtt gtttgaaacg aatatcatat
     5821 ttgtaaatgt catctccatt gagcccttgc attttacccg caagacgaat atatggtgca
     5881 accactttcg tatgatctaa gttaaaactt tcaacgttca tttttggcat tggtatgacc
     5941 tccttcatgt ttaaatccat tttaacatat tccaattaag atgaaagggg ggacaaagtg
     6001 tttaaatgcc gatataatag ggaaaggagc tttaaaccta ttattacgag tggtttaata
     6061 gggattattg tttaaaaaaa attttttgta agatagcata aaggcgtctc gaaatgaaaa
     6121 tgtattgcaa aaagggtaaa atatagtatg aaaattttga agagtgttaa aaatgacatg
     6181 acaaagtacg gaaagttcgt taaaataatt acaaaattga atcaatattt atcaagagtg
     6241 gtggagggaa ttggcccgat gaaacccagc aacctcatct aacggcgata aaggtgcgaa
     6301 ttccaacagt gtaaatgctg aaagataaat gaaggcaaag atgttatcac atatatacat
     6361 cagtcacact tatcaatatt tgtgttggat gtaaatgggg ataacatttt ttgtttaagg
     6421 aggagtaaca cggtgacaac agtagagcaa cgtattttag attatatcga tcaacataga
     6481 tgggcttata tagatatgag tcatcaaatt cacggacgtc cagaactcgg taacgaagaa
     6541 atttttgcat cgcgtttgct gattgaaaat ttaaaggaac acaattttga agttgagcgt
     6601 gacattgctg ggcattctac aggttttatt gccacatatg actcagaaat tgaggggccg
     6661 accattagtt atctcgctga atatgatgca ttgccaggtt tagggcatgc ttgtggtcat
     6721 aatattatcg gtacatcaag tatgttagca gcgattgcat taaaacaagt agtagatgac
     6781 attggaggta aagttatact gttcggttgt ccggcagaag aaggtggcga aaatgggagt
     6841 gcgaaggcat catacgtacg agaagggctc tttgatgacg tcgatgttgc cttaatgatt
     6901 catccgggta atgaaacgta tccgaccatt ccaacacttg ctgtagacgt tctagatatt
     6961 aagttttatg gtcaaagtgc gcacgcttca gaaaatgctg aagaagcacg caacgcttta
     7021 gatgcgatgt tgagctattt taatggggtc gcacaactcc gtcaacatat taaaaagact
     7081 gaacgtgtgc atggcgtcat tttagatggc ggtcaagcag cgaacattat tcctgacttt
     7141 acacatgcgc gcttttatac acgtgcaaca acaagaaaag acttggatgt tctcacttca
     7201 agagtgcatg atattgcccg tggtgcggca atacaaacag gatgtgaatt tgaatttgaa
     7261 ccgattcaaa acggtgtgaa tgaattcatt aaatcaccat tgttagatca attatttgaa
     7321 cattacgcaa cggaactcgg tgaagaagtc agtcatgatg attttggtta cggctcgact
     7381 gatacgggga atgtcagtca tgtcgtgcca acgatacatc cacacgtcaa aattgggcca
     7441 agaagtttag tcggtcatac ccaccgtttt cgtgaagcgg ccgcaagtcc aatgggggat
     7501 gatgcactca ttaaaggcgc gaaaatgatc gcattaatgg gggctaaatt aatacaagat
     7561 caaacgttat tagcagaaat acaaaaggag catcaacata aaagggagaa atgacaatgg
     7621 cacacaatat tcaatatcga agtcaattaa caatgggaga aatttatgat acgaacatcg
     7681 tttactcgtc aagaccctca tatgtttcga atccctggct cgcaccagat gagcatcaat
     7741 ccaacttttt aacagggcgt gaattgctga ttgcacaatt gccaatcatc gttcatgaag
     7801 cgagtgtcac cgacaaatta caacagttat tccaactcat agggcgagac attccagaaa
     7861 atgtcattac gtttcaagac caagcaagtt atgaacagac attaaaacaa ctgacagaag
     7921 agcaatcacg tttaatttat ttccaatatg tccatggaga taatattgtt gacgcgaagc
     7981 actatgcgat ggacaaacag ttatttaaag acttaaataa taaatcatta attccgaaat
     8041 ggacaggtgg ccaatatata cctaagcgtg aaattgtcgc atttcaagac ttcaaaacag
     8101 cagtccgaca atgggagttg ccactcgtca ttaaaccagg agatgacttg ccgactgcag
     8161 ggggctatgg cgtcatgatt tgttataacg aagatgattt ggagaaagct atcgcacgtg
     8221 tcgaacaagc agaagcagcg acagacacgt taattatcga acaatgtgtc gaagctgtcg
     8281 acaactattg tgtccagttt gcatggcacc ccgaagacgg catcgtgtac ttaggttcag
     8341 ccaaacaatt gacgaatgca tatggttttt ataacggcaa catcaatgca atcaatgtgc
     8401 cagaacaagt cattcaagca ggctacgaaa ttatggacat cgcagtaaag gaagggttta
     8461 ttggcatcgc gggctttgat ttgctcgtcg atcaacaggg tgttgtctac gcaattgatt
     8521 tgaattttag acaaaacggc tcgacaagta tgttgttgct caaagatgca cttacagggt
     8581 catatcacaa attttatagt tattttgcga acggtgacaa cgagcgattt ttcgaggccg
     8641 tacgtcattt cgtggaacaa ggcgtccttt atccgctctc gtattatgat ggggattggt
     8701 atcaagaagt gcacgtcaat tcgagatttg gatgtatttg gcatgccgac agtccagaac
     8761 aaattgaagc atatgaaaaa caatttatag cccgagcagg cttataaaac acgatccact
     8821 gaggtatgtt atagttgaaa gagaacatat catcgaaatt tgacgaatag cgatgtctgg
     8881 tttatatttg tcattgattt tgattggaaa aaggagcaga gtcatgtcat acaagaatga
     8941 gcgtttttat aaagatatac ttacaaacga acaatttttt attgctgtca aagataaaaa
     9001 aatgattaag caccgtcata atgacaaatt gttattttgc ttttggacac gtgaatcttt
     9061 agccaaagcg tatttagata atttgaatat tgaatacgac aaaattaaaa caatggatat
     9121 tgaccgtttt gcgacttatg aattggacga aatgtttgat gaagaagacg aagcattggt
     9181 aaacgtgaca aatgatgcag aaggtcacga aattaaaatt gtagaagcta caaatgattt
     9241 gatgactgat ctagacaata ttcgtattcg cgagtttgta caagatgtgg cgaaaacaga
     9301 taccgtttat ggtttaagtc aaaaaggcga ccgtcaattt atgattgttt atgatgaaaa
     9361 cgacaacttt gatcagtcgc attttatgcc agtttggagc ttgcgtaaac gtgctgaaaa
     9421 agtagcggaa gaagattttg aaacatttga attaattgat gtagaaggcg aagtatttgc
     9481 ggattggtta gatgaattgc gtgatgacaa tcgctatgtc gccattgatg tgaaaccagg
     9541 cgtagtgggc accatcgtct cagcacaaaa actcgccaat gaattaacgt tttaaataga
     9601 atgaggcgta ttacattggg aaacagctga tttcgggagt agtcactcaa aagatgtaaa
     9661 ttcaaggtaa tatggtaagc tgtttgatga tgagaggttg agatgatgtg atctcagcct
     9721 ttttatttca gatgaggaat gtaatgaaag aaagcataaa taaaagggga attacatctc
     9781 tttataatga cttttgaaac gttgaataga atggcaattg aggtggatta cataaaaaat
     9841 ggattatctt catattaaaa gattgcctca ttcctacgat taaagcatat gaaaaagcta
     9901 ggaacgtatc cattgcgcct agctttttaa ctgtttgata gagatgaacg atataatgca
     9961 aaatctaata aagcgtcatc tctatacaaa gatttaaaat gattttataa atatagcgac
    10021 cctaatgcac ctgaaaaagc accattttgt aaataatgcg gcttaaatcc tcttaaaatc
    10081 gtataatctg tcacaacctt ttgaagcaat ggattatctt ggaatgacga cccaatatac
    10141 actacatctt ccacttgatg ttctctcgct acatgaatcg ctacagtcgt cacactttca
    10201 ccgacaaccc cgatgacaga agcgattttg tcagcatttg taaatgtttt gtccatatta
    10261 agcaacacat ggccgaagtt tgctgctgtc aattctccag aaataggagg tgtgtcattt
    10321 ttataaatat gtttcacctt taaatcaata atttcacgat caccttgttg cgccatctct
    10381 gtcaactttt ggtaatccgt aatacccgtt aataaataac cgaggccctg aatcatgccg
    10441 ccacctgtac caatgccgcc gacacgtttt tgcccctcat tgtcagaaaa atgaagtgat
    10501 gtcccagtac cgacattcgt gaaaatatat tgctgaatat gaatattttg ttcttctagt
    10561 aaaatctgta cgccctttgc agctgcatcg aattcaatga aaagttgtgg ttcgcaatcg
    10621 agtaattcgc ttaaaacttt cgcattgccc cctgtcatat gaatatcttc gcacgcttgt
    10681 tgattcaacc agtttgctac agtttctagt gatgttgtgg gataagtttt aaaagtacgc
    10741 tcaccgtctt gttcaatcac aactttgatt aacgtcccac ctgcatcgat acctattcgc
    10801 atatctgtca cctcaaaata attgtttatc accaatatat actatatgat aatgacgaaa
    10861 ttacaagact aaatttgata acaaatgaag gtgtatgatg taattaagtc catatatcat
    10921 ccgtgatgtg gaagaagtag cacaatttta tcaaaagaca tttggtcggg cgctgaaatg
    10981 tttaaacgag catgagggaa agctgcttca tgcagagtta gaaattacag cgcaacatta
    11041 cgttgatctt caaattatgg aaaaccgatt gaccgtcaag gcgaccattt aattttaact
    11101 tttgaccaat tagaggaaca acagcggatt gatgaggcgt taagtgaagc gggggacccc
    11161 atatgccgct ccaaaaaaca ttctttggtg ctatacatgg tcaagtcatc gatcgctacg
    11221 gcatcaactg ggtcatgaac tattttgaat aaagataaaa agggatagaa tataaaaatg
    11281 tttggtacta tagatacaat ctgtttgttg aacttgcctt tcctatgatt tgtgattttt
    11341 gattgccttc aaagcttcgc tttccgatgt gttggtcctt caactcatta gaacttaatt
    11401 aaactgttac atttgccgag gcattagtgg attttgggag cagagtagaa atctcatgtg
    11461 caacaaagat ttcgtcttac tgtccccgca aggctgactc gacttcttaa aagcgcatgc
    11521 attgagaagt cagacagcta ctgcgataaa cagtaaccat tattaaagta aagaagtcac
    11581 tctaaggcgt atgcacacat tccctcagga ggctcaactt tcaaggcaat ctacatcaca
    11641 tacagtcact tagggcaagt ttctaaaatg aagacaccca atagcgtcca tgtttttacg
    11701 tccaagtcct cctcattttt cgacagttta atcatcatta atggatatca gcccataaag
    11761 aaaaaacata ctaagattag ctgtgaagaa atctatcgtc ataaatttct tcacagctat
    11821 tttttatagt tgtagagaga agtagatcgc gcagtctcgt ggatctttga atccgtaaaa
    11881 aaactgatca gctttactcc ctttttgaaa ttcgattgaa gtatgttggg ttctagaaac
    11941 cgtgtatagg aaaatgaaat gaaaaaggct aagtaaagtt aaagatttct caattcaata
    12001 aagaaaggta tgatttttat caactgttta ggtattgata taggtaagtc agaaagtgtg
    12061 gtcgcacatt ataaggatga agttttggtt aaagaaatgg tcattcaaaa taatcaaaat
    12121 ggctatcgtt atcttaaaaa ttacatcaag catcttgatt ctctatttat cctctttgaa
    12181 tcaacaggta tttattcaag aggcatgaaa cgcttttgtg aaattcacaa aatagattac
    12241 ttagaaa
//
LOCUS       DANHPA010000079        12008 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.079, whole genome shotgun sequence.
ACCESSION   DANHPA010000079 DANHPA010000000
VERSION     DANHPA010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 12008)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12008)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12008
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.079"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..377
                     /locus_tag="PTC28_001743"
     CDS             <1..377
                     /locus_tag="PTC28_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HDK5717023.1"
                     /translation="TAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFAL
                     PNAEVMIHQPLGGAQGQATEIEIAAKHILRTRERLNKILSERTGQPIEKIEKDTDRDN
                     FLTAQEAKEYGLIDEVMEPEKA"
     gene            474..971
                     /locus_tag="PTC28_001744"
     CDS             474..971
                     /locus_tag="PTC28_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDK5717024.1"
                     /translation="MKQHVRRATLNDLEAIMAIYNHAILHTVTVYTYEPTHIEERRQW
                     LAEKQRDGYPVFVYENEGTVLGFATYGPFRNWPAYQYTIEHSIYVSPDARRKGVASQL
                     LTVVIEDATANGYQTIVAGIDDSNEGSLKLHEKMGFNYMGTLKKVGYKFERWLNLVFY
                     QKQLK"
     gene            complement(1575..2477)
                     /locus_tag="PTC28_001745"
     CDS             complement(1575..2477)
                     /locus_tag="PTC28_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000816312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HDK5717025.1"
                     /translation="MKRYLITGGTGMVGRALVEQLTRSNEAIIYILTRSDQTSQQQHV
                     HYINWSKDGWEEEVPHIDIVINLAGATLNKRWTTQHQQIMMTSRIQATRALFDLFKLR
                     EQTPDVLFNASAMGYYPPSKTAVYTESYQTTPHDLLSEIVYQWERQATLFEQLGTRVI
                     CGRFGLILSRDGGALPMMALPYRFFVGGRVGNGRQWYSWIHLADLVRAIQFLIQSPKA
                     SGPYNLSAPVPETQHQFGKVLGSVTHRPHYTWVPALILRLVLGKMSTLILDTQYMVPQ
                     KISDLGFQFDYPTLPLALKDLYSK"
     gene            3288..3956
                     /locus_tag="PTC28_001746"
     CDS             3288..3956
                     /locus_tag="PTC28_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4887 domain-containing protein"
                     /protein_id="HDK5717026.1"
                     /translation="MSAPKPNEQGSRNVKPDKKKRRLFGFLSVIVILLLLGGLVFAIF
                     SFVDQSHRGNERLKEKSIEEQKEKRDAEIKKERERKEREAREKERSIEAAQAEQERSI
                     EAARQAEIEAERQAQLEWQRQQQQQQQQREKEAEARKSKSKTEEEKDDSDNKATEKER
                     TTEEATTEEPKTTQSKPSTEQRSSQETQTGQSQSNERPTAERNTAPQQRSEPSSKARN
                     SDES"
     gene            4587..5624
                     /locus_tag="PTC28_001747"
     CDS             4587..5624
                     /locus_tag="PTC28_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717027.1"
                     /translation="MERMIHVQQKIVPDLIDKMRRRFSILTTIQKYQPVGRRTLSELL
                     NLTERVLRSETDLLKQQELISVKSTGMTLTSQGLDVVSQLNAYFDQYTDYHHLAQSIK
                     STYQLDEVHVIPGDSDKDSNVKVELGRIAGQLLEKQLYDHAIVSVTGGSTMASVSDAM
                     SHLPFQVLFVPARGGLGQNVIFQANTICSRMAQRTGGSYTTLYVPEQVSELTYQNLMN
                     EPSVIQTLDKIRESQFTIHGIGDALKMAKRRQSSPEVIEKLQHHFAVGEAFGYYFDQQ
                     GQIIHRVKTIGIQLEEAQSKAHIFAVAGGESKGLAIKAYLKMATPNTVLITDEAAAKV
                     ITRERFVENKK"
     gene            5687..6694
                     /gene="gap"
                     /locus_tag="PTC28_001748"
     CDS             5687..6694
                     /gene="gap"
                     /locus_tag="PTC28_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HDK5717028.1"
                     /translation="MAVKVAINGFGRIGRLAFRRIQDVENIDVVAVNDLTDDDMLAHL
                     LKYDSTQGRFTEEVEVIDGGFRVNGKEVKSFSEPEPKNLPWGELDIDVVLECTGFFTD
                     KEKAEAHIEAGAKKVLISAPAKGDLKTVVYNVNHEILDGTETVVSGASCTTNSLAPVA
                     KTLQDNFGIVEGLMTTIHAYTGDQNTLDAPHRKGDKRRARAAAENIIPNSTGAAKAIG
                     LVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKEVSVEEVNKVMREATNESFGYIEDE
                     IVSSDVIGMTFGALFDATQTRVMTVGDRQLVKVASWYDNEMSYTAQLVRTLEYLASQS
                     K"
     gene            6826..8016
                     /locus_tag="PTC28_001749"
     CDS             6826..8016
                     /locus_tag="PTC28_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HDK5717029.1"
                     /translation="MAKKDVTNVELKDKVVLVRADFNVPMKDGEITNDNRIVQALPTL
                     KYIIEQGGKVVVFSHLGKVKEESDKEKLSLAPVAKRLSEKLGQDVQFIPETRGEKLES
                     AIQALNSGDVLMFENTRFEDVDGKKESKNDSELGRYWASLGDIFVNDAFGTAHREHAS
                     NVGISTHLETVAGFLMEKEIKFIGGVVENPNKPVVAILGGAKVSDKIGVIENLLNIAD
                     KVLIGGGMAYTFLKAQGKEIGLSLLEADKIDFAKDLLERASDQIVLPVDAKVAKEFSN
                     DAQITTVSIDDIPEDQEAMDIGPETVALFKEQLKGAHTVVWNGPMGVFEFSNFAQGTI
                     GVCEAIAELQDATTIIGGGDSAAAAMQLGFEDDFTHISTGGGASLEYLEGKELPGIKA
                     IANQ"
     gene            8062..8823
                     /locus_tag="PTC28_001750"
     CDS             8062..8823
                     /locus_tag="PTC28_001750"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HDK5717030.1"
                     /translation="MRKPIIAGNWKMNKTVQEAKDFVQTLPALPDTNEVEAVICAPTI
                     QLDALISLTKENVAPGLKIGAQNTYFEESGAFTGETSPVALEALGVSYVVIGHSERRD
                     LFHETDEDINKKAHAVFNHNMTPIICVGESDEERESGKANEIVEAQVEKALKGLSDEQ
                     IKKVVIAYEPIWAIGTGKSSTAKDANEMCAAVRQKIAKLTSDEVAQATRIQYGGSVKP
                     GNIKEYMAETDIDGALVGGASLKVEDYTQLLEGAK"
     gene            8826..10343
                     /locus_tag="PTC28_001751"
     CDS             8826..10343
                     /locus_tag="PTC28_001751"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002956091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HDK5717031.1"
                     /translation="MAKKPTALIILDGFANREEVHGNAVKQAHKPNFDRYYEKYPTTQ
                     IEASGLDVGLPEGQMGNSEVGHMNIGAGRIVYQSLTRINKSIEDGDFFDNDVLNKAMD
                     HALNNHSALHIFGLLSDGGVHSHYKHLFALLELAKRKNLTKVYVHAFLDGRDVDQKSA
                     LKYIDETEEKFNALGVGQFASVSGRYYAMDRDKRWDREQKAYDAIRGFSDVKYASARE
                     GVQANYDNNLTDEFVEPFVVENQNNGVNDGDAVIFYNFRPDRAGQMSEIFTSKAFDGF
                     EVERVNDLFYATFTKYNDQVDSAVVFEKVDLKNTIGEVAQDNGLVQLRIAETEKYPHV
                     TYFMNGGQNEEFEGERRILINSPKVATYDLKPEMSAYEVRDALLKELDKGELDLIILN
                     FANPDMVGHSGMLAPTIKAIEAVDECLGDVVDKILDMDGQAIITADHGNSDEVLTDDD
                     QPMTTHTTNPVPVIVTKEGITLRETGRLGDLAPTLLDLLNIEQPEDMTGESLIQH"
     gene            10471..11775
                     /gene="eno"
                     /locus_tag="PTC28_001752"
     CDS             10471..11775
                     /gene="eno"
                     /locus_tag="PTC28_001752"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017466665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HDK5717032.1"
                     /translation="MPIITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTG
                     EHEAVELRDGDADRYLGKGVEKAVENVNEIIAPELIEGEFSVLEQVSIDKMMIQLDGT
                     ANKGKLGANAILGVSIAVARAAADFLGQPLYKYLGGFNATVLPTPMMNIVNGGSHSDA
                     PIAFQEFMILPVGAESFKEALRWGAEVFHALAKILKKRGLVTAVGDEGGFAPKFEGTE
                     DGVETILEAIKAAGLEPGKDVFLGFDCASSEFYENGVYDYTKFEGENAAKLTAEEQVD
                     YLEQLVNKYPIITIEDGMDENDWEGWKLLTERIGDRVQLVGDDLFVTNTEILSKGIEQ
                     GIGNSILIKVNQIGTLTETFEAIEMAQKAGYTAVVSHRSGETEDTTIADIAVATNAGQ
                     IKTGSLSRTDRIAKYNQLLRIEDDLYETAIYEGLKSFYNLSK"
BASE COUNT         4043 a         2030 c         2544 g         3391 t
ORIGIN      
        1 taacagctgg ttttgcgatt tacgatacaa ttcaacatat taaaccagat gtacaaacaa
       61 tttgtatcgg tatggcagca tctatgggct cattcttatt agctgcaggt gcaaaaggta
      121 aacgtttcgc attaccaaac gcagaagtga tgattcacca accacttggc ggtgcacaag
      181 gtcaagcgac tgaaatcgaa atcgcagcga aacacatttt aagaacacgt gaaagattaa
      241 ataaaatttt gtcagaacgt acaggtcaac ctattgaaaa aattgaaaaa gatacagacc
      301 gtgacaattt cttaactgct caagaagcaa aagaatacgg tttaatcgac gaagtaatgg
      361 agcctgaaaa agcttaataa agtgatgcga taaatgtggg gtgagacaac agtttcatcc
      421 cttttttgct atatcggaag ggtttgaaag tgcgtattaa tggaggattg acgatgaagc
      481 aacatgttag acgagcgaca ctgaatgatt tagaagcaat tatggcaatc tataatcacg
      541 ccattttgca tactgtaaca gtttatacat atgaacccac gcatattgaa gaacgacgtc
      601 aatggctagc agaaaagcaa cgtgacggtt atccggtttt tgtttatgaa aatgaaggga
      661 cagtgctagg ttttgcgact tatggtcctt ttaggaattg gcctgcctat caatatacca
      721 ttgaacattc catctatgtt agccccgatg caagaagaaa aggtgtggcg tctcagttat
      781 taacagtagt gattgaagat gcaacagcga atggttatca aacgattgtg gctggcattg
      841 atgatagcaa tgaaggaagt ttgaaattgc atgaaaaaat gggcttcaac tatatgggaa
      901 cattgaaaaa ggtcggctat aaatttgaac gctggctcaa tctcgtattc tatcaaaagc
      961 agttaaaata agatgaaaat tgtacgggca tgcgacataa aaatttttga tgctattgat
     1021 gcaatatttt tgttaaactt gcccgtccta tgatttgtgg cttttgattg ccctcatggc
     1081 ttcgcgttct aaggactggc ccttcaactc ggcttgattg aaatgaacac tagattgatg
     1141 cagaattgga tattgggagc aatacagaaa gctcatgtgt cacaaagatt tcgtcgtact
     1201 gcccccgcat ggctaactcg acttcttaaa agtatgcgca ttgagaagtc agacagctac
     1261 tgcgttgaac agcggccaca ctcaaaatta aaagacatca ttttgttttc aactgtatcc
     1321 ctcaggcgtc tcagccttct gggcaagctt atatcaaata cagtaaaatt aagggtaaga
     1381 ttatgaaatc aagaaacaat agtatcaatt atcccattca cccttatttt cccactgctt
     1441 tatagccgtt aatgaaatat caatctatga atggattatg gctaaaaatt ttctatgtcc
     1501 cctctatagg ctactaataa gatgactcga atggttgtac aatcaacaac atttcgagtc
     1561 atctatagtg gtttttattt cgaatataaa tcttttaagg ctaacggtaa ggtcggatag
     1621 tcaaattgaa atcctaagtc tgatattttt tgtggtacca tgtattgtgt atcgagtatg
     1681 agcgttgaca ttttgccaag cacaagacgt aatatcaatg caggtaccca agtgtaatgt
     1741 ggtcgatgcg tgacgcttcc taaaactttg ccgaattgat gttgtgtttc gggtactggt
     1801 gctgataaat tatacgggcc agaagctttg ggagactgaa tgagaaattg aatggcacgt
     1861 actaaatctg ctaaatgaat ccatgaatac cattgacggc cattacccac acggccacct
     1921 acaaagaaac gataaggcag tgccatcatt ggaagtgcgc cgccgtcacg agagagaatc
     1981 agtccaaaac gtccgcaaat gacgcgtgtg ccaagttgtt caaacagtgt cgcttgtctt
     2041 tcccactgat acacgatttc tgataataaa tcatgaggtg tcgtttgata tgattcagta
     2101 tacacagccg tttttgatgg tgggtaatac cccatagcac tagcgttaaa taggacatca
     2161 ggtgtttgtt cacgtagttt aaataagtca aatagcgcac gtgtcgcttg aatacgactt
     2221 gtcatcataa tttgttgatg ttgcgttgtc caacgtttgt tcaatgtagc acctgccaaa
     2281 ttaataacta tgtcaatgtg agggacttct tcttcccaac cgtccttgct ccaattaata
     2341 taatgtacat gttgttgttg tgaagtttga tcacttcttg tcaggatata aattatcgct
     2401 tcattagaac gtgtaagttg ttcaactaaa gcacgcccca ccataccagt gccacctgta
     2461 attaaatagc gtttcatagg cttcgctcct ttactttata tgagttcata gtattgtcaa
     2521 taaatggtca tcaattcttc acttacgatg acttgaatct gtttattttt tcacaaagta
     2581 cgttataata gagatacctt cgataattaa tacatctctt aattaaattc agtatacccc
     2641 ttaaatatat acgacgaagg tatttttgac tccctttagt agagatctgg atgatgcagc
     2701 attcagatct ctttatttat gttagggaat caatattgtc ttcgttagtg gcttcaaagt
     2761 gacttataaa aatgactcgt gtaaaaagtt atttattttt acgttgacgg tcattcattt
     2821 tttgattgat gaacttgcca attacacgat aaataatgaa acgaatgagc atattaacaa
     2881 ttcttttcat tttgactctc ctttacattt gtcttagtac atacattcct ttatttttac
     2941 aaattaaact taagaacgtg tcagacttaa ctagaactag aaatacgtat ttaaaaatgg
     3001 tttctgtatg aatgatttca agagatataa acgggtaaat aataagatga atagtacaaa
     3061 gttaaatggt tatatgccat ggctatgtcc gacataatag acagaaagag agggtatcca
     3121 tgtgataatt agatgattgt gtcatttaca ttaattgaaa ttccagtata ctaaaagcta
     3181 actcatttta ttaatttcga taaaatgcgt gcgttaagtt ttgaattcat aatgaaatat
     3241 gattgaataa aatatactgt catcaattta taaagagagg gaatgcaatg tcagcaccaa
     3301 aaccaaatga gcaaggcagc cgcaatgtga aacctgataa aaaaaagaga cgtttatttg
     3361 gctttttaag tgtcatcgtc atactgttat tgctcggggg actcgtcttt gccatttttt
     3421 catttgtcga tcaatcgcat agagggaatg aacgtttaaa agagaagtca attgaagaac
     3481 aaaaggaaaa gcgtgacgca gagatcaaaa aagagagaga gcgaaaagaa cgcgaagcac
     3541 gagaaaaaga acgaagcatt gaagcggctc aagctgaaca agaacggtca attgaagcgg
     3601 cacgccaagc agaaatagaa gccgaacgac aagcgcaact cgaatggcaa cgtcaacaac
     3661 aacagcagca acaacaaaga gaaaaagaag cagaagctcg aaaatcgaag tcgaaaacgg
     3721 aagaagagaa ggacgacagc gataataaag caacggaaaa ggaacgtaca acggaagaag
     3781 caacgacaga agaaccgaaa acgacacaat ccaaaccttc aacagagcag cgttcgtctc
     3841 aagaaacaca gacaggtcaa tcgcagtcaa acgaacgtcc aacagctgaa aggaatactg
     3901 cgccacaaca gcgctcagag ccatcctcaa aagcgcggaa tagtgacgag tcataatata
     3961 tcgtaatcat aggcaaaatg aatagggcaa aaaagggtcg ttgagacatg taagtcatct
     4021 cagcagccct tttttattaa tgatacgtat cgttttagaa tataaggtta agaagcaatg
     4081 ttaagagtat cgataaaata attgagaaaa gacagccagg caagcatccc actggggtac
     4141 aacctattgt gcgcacatat gtccgctgaa atggtcctgt atcgttttgg aatctattat
     4201 cttgacggtg gttaatctca tcaggatgtc gatagcgtgg gtcggatgga tcaatgactt
     4261 cgggttggtc agattgttta gacatagttt cacctctttc tttcaatgta aattatcttg
     4321 tcaatgattg caatgaatgg ggtatcgatg tttagtttta gtggaaaatg tgaataataa
     4381 catcacatca gttatcatgt tgtgtgttga tggtcgttat ttgtccaacg tttataaaaa
     4441 tcgggatgct ttttgacttg catttgttgt gcacaaatag tatgatgaat ttgtaaacat
     4501 gataagtatt tattgtattt gggactaaaa atgtcacggc atggcttgaa tatggccatc
     4561 ttgttactat taaggaggcc tttatcatgg aacgtatgat tcatgttcaa caaaaaattg
     4621 tgcctgactt gatagacaaa atgcgtcgac gtttttctat tctaacaacg attcaaaagt
     4681 atcaaccggt tgggcggcgg actttaagtg agttgcttaa cctcactgag cgtgtgctac
     4741 gttcagagac agatttattg aaacaacaag aattaatatc ggtaaaatcg acaggtatga
     4801 cattgacttc acaaggttta gatgttgtct cacagctgaa tgcatatttc gatcagtata
     4861 cggactatca tcaccttgca caatctatca aatcgacata tcaacttgat gaagttcatg
     4921 tgattcctgg tgatagtgat aaagattcaa acgttaaagt agaattaggt cgcatcgctg
     4981 gacagcttct tgaaaagcaa ttgtatgatc atgctattgt gtcagtaaca ggtggctcta
     5041 ctatggcatc ggtaagtgac gcaatgtcgc atttgccttt ccaagtactc tttgtgccgg
     5101 cacgtggcgg tcttggtcaa aatgtcatct ttcaagcgaa cacaatttgt tctcgtatgg
     5161 ctcaaaggac tggtggcagt tatacaacgt tatatgtgcc tgaacaagtg agtgaattga
     5221 cctatcaaaa tttaatgaac gaaccttcag tgattcaaac gctcgataaa atacgtgaat
     5281 cacagtttac aatacacggt attggtgatg cgctgaaaat ggcgaagaga agacaatcgt
     5341 caccagaagt cattgaaaaa cttcaacatc attttgctgt gggtgaagcg tttggttatt
     5401 attttgatca acaagggcaa attattcaca gagttaaaac gattggtatt caactagaag
     5461 aagcgcaatc aaaagcacat atttttgctg tggctggcgg agaatccaaa gggcttgcga
     5521 ttaaagctta tcttaagatg gcgacaccta atacggtgtt gattacagat gaagctgcgg
     5581 caaaggtaat cacaagggaa agatttgttg aaaataaaaa gtgagtgaat tgtttaagta
     5641 ttgaattgat ccacttttta aatatcattt aaaggaggcc attaacatgg cagtaaaagt
     5701 agcaattaac ggatttggta gaattggtcg tttagcattt agaagaattc aagatgtgga
     5761 aaatatcgac gttgtagcag taaatgattt aacagacgac gatatgcttg cacacttatt
     5821 aaaatatgac tcaacacaag gtcgttttac tgaagaagta gaagtaattg acggtggttt
     5881 ccgtgtaaat ggtaaagaag tgaaatcatt ctctgaacca gaacctaaaa acttaccatg
     5941 gggcgagtta gacatcgacg tggtattaga atgtactggt ttcttcactg ataaagaaaa
     6001 agctgaagca cacatcgaag caggcgcgaa aaaagtatta atttctgcac cagctaaagg
     6061 tgaccttaaa acagttgtat ataacgttaa ccacgaaatt ttagatggta ctgaaacagt
     6121 tgtttctggt gcttcatgta caacaaactc attagcacct gttgccaaaa ctttacaaga
     6181 caactttggt atcgttgaag gtttaatgac aacaattcac gcttacactg gtgaccaaaa
     6241 cacattagac gcacctcaca gaaaaggtga caaacgtcgt gcgcgtgcag ctgctgaaaa
     6301 cattatccct aactcaactg gtgctgcgaa agcaatcggt ttagttattc ctgaaatcga
     6361 tggtaaatta gacggtggtg cacaacgtgt tcctgtagca actggttcat taactgaatt
     6421 aacagttgta ttagaaaaag aagtttcagt tgaagaagtt aacaaagtca tgagagaagc
     6481 aactaacgaa tcattcggtt acattgaaga cgaaatcgta tcttctgacg ttatcggtat
     6541 gacattcggt gcgctattcg atgctacaca aacacgtgta atgactgttg gcgaccgtca
     6601 attagttaaa gttgcatctt ggtacgacaa tgaaatgtca tacactgctc aattagttcg
     6661 tactttagaa tatttagcaa gccaatctaa ataatataga ttaaaatagg tttgtaagta
     6721 cttaaatatg tgcttctaac tattttgtag ctgatagtag gcgggggagc acaaacgctt
     6781 ctccgcttat tttaaaattg agagcgataa cgaggaggat gctttatggc aaaaaaggat
     6841 gtcacaaatg ttgaattaaa ggataaggtt gttcttgtac gtgcggattt caatgttcct
     6901 atgaaagacg gcgaaatcac gaacgacaac cgtatcgttc aagcattgcc aactttaaag
     6961 tacatcattg agcaaggtgg gaaagtagtc gtattctcac acttaggtaa agtgaaagaa
     7021 gaaagtgata aagagaaact ttcattggca cctgttgcaa aacgtttatc agaaaaatta
     7081 ggtcaagatg tccaatttat tcctgaaaca cgtggtgaaa aattagagtc tgcaatccaa
     7141 gcattaaatt caggcgatgt gttgatgttt gaaaatacac gttttgaaga tgttgatggt
     7201 aagaaagaat ctaaaaatga tagtgaatta ggtcgttact gggcatcact tggcgatatt
     7261 tttgttaatg atgcattcgg tacagctcac cgtgaacacg cgtcaaatgt tggtatttca
     7321 acacatctag aaacagttgc tggattttta atggaaaaag aaattaaatt tatcggtggt
     7381 gttgttgaaa atccaaacaa acctgttgtt gccatccttg gtggtgcaaa agtttctgat
     7441 aaaattggtg tcattgaaaa cttattaaat attgctgaca aagtgctgat cggtggcggt
     7501 atggcgtaca cattcttaaa agcgcaaggt aaagaaattg gtctttcatt acttgaagca
     7561 gataaaattg acttcgcgaa agatttatta gaacgtgcaa gtgatcaaat cgtattacca
     7621 gttgatgcaa aagttgcgaa agaattctca aacgatgcac aaattacaac agtttctatc
     7681 gacgacattc ctgaagatca agaagcaatg gatatcggtc ctgagacagt cgcacttttc
     7741 aaagaacaat taaaaggtgc acatacagtg gtatggaatg gtccaatggg tgtgttcgaa
     7801 ttcagtaatt ttgcgcaagg tacaattggt gtgtgtgagg cgattgctga gctgcaagat
     7861 gcgacaacaa ttatcggtgg tggcgattca gcagcagcgg ctatgcaact tggctttgaa
     7921 gatgacttca cgcacatttc tacaggtggc ggcgcgtcat tagaatactt agaaggtaaa
     7981 gaattaccgg gcattaaagc aatcgcaaat caataactct agatatgaga tttgattgaa
     8041 caatagaggg agtgtttaat agtgagaaaa ccaatcatcg caggtaactg gaaaatgaac
     8101 aaaactgtac aagaagcgaa agattttgta caaacgttac cagcattacc agatacaaat
     8161 gaagttgagg cagtgatttg tgcgcctaca attcaacttg atgcactgat ttcattaacg
     8221 aaagaaaatg ttgcgccagg tcttaaaatc ggtgcgcaaa acacttattt tgaagagagt
     8281 ggtgcgttca caggagaaac atctccagtc gcattagaag cattaggtgt gagctacgtt
     8341 gtcatcggtc actctgaacg tcgtgactta ttccacgaaa ctgatgaaga cattaacaaa
     8401 aaagcgcatg cagtgtttaa ccacaacatg acaccaatca tttgtgtcgg tgaatcagat
     8461 gaagaacgtg aaagtggtaa agcaaacgaa atcgttgaag cccaagttga aaaagcgtta
     8521 aaaggtttat cagatgaaca aattaaaaaa gttgttatcg cctatgaacc aatttgggcg
     8581 attggtacag gtaaatcttc aacagcgaaa gatgcgaacg aaatgtgtgc agcggtccgt
     8641 caaaaaatcg cgaagttaac aagtgatgaa gtagcacaag caacacgtat tcaatacggt
     8701 ggtagtgtaa agccaggcaa tattaaagaa tatatggctg aaactgatat tgatggcgca
     8761 ttagttggtg gtgcatcact taaagtagaa gattatactc aattgttaga aggtgcaaaa
     8821 taattatggc aaaaaaacct acagcgctta ttattcttga tgggtttgcg aatcgagaag
     8881 aggtacacgg taatgctgtt aaacaagcgc ataaaccaaa ctttgatcgc tactatgaga
     8941 agtatcctac gactcaaatt gaagcaagtg gtttagatgt gggacttcct gaaggacaaa
     9001 tggggaattc agaagtgggc catatgaaca ttggtgccgg acgtattgtg taccaaagct
     9061 taacacgtat caataagtct attgaagatg gtgacttttt cgataatgac gtcttaaaca
     9121 aagcaatgga ccatgcatta aacaatcata gcgcattaca catcttcggt ttgctttctg
     9181 atggtggcgt acatagtcat tacaaacatt tattcgcgct gttagaatta gcgaaacgta
     9241 aaaacttaac aaaagtttat gtccacgcat ttttagatgg tcgtgacgtt gatcaaaaat
     9301 cagctttaaa atatatcgac gaaacagaag agaaatttaa cgcattaggt gtaggtcaat
     9361 ttgcatctgt atcaggacgt tactatgcaa tggaccgtga taaacgttgg gatcgtgaac
     9421 aaaaagcata cgatgcaatt cgcggattca gtgatgtaaa gtacgcatca gcacgtgaag
     9481 gtgttcaagc aaactacgac aacaatttaa ctgacgaatt tgttgaaccg tttgtagttg
     9541 aaaaccaaaa caatggtgtg aacgatggcg atgctgtgat tttctacaac ttcagaccag
     9601 accgcgcagg ccaaatgtct gaaattttca caagcaaagc attcgacggt tttgaagttg
     9661 agcgcgtaaa tgatttattc tatgcgacat ttacaaaata caatgatcaa gtagattcag
     9721 cagttgtatt tgaaaaagta gacttgaaaa atacaattgg tgaagtggca caagacaatg
     9781 gtttagtcca attacgtatt gctgaaactg aaaaatatcc acacgtgaca tactttatga
     9841 acggtggaca gaatgaagag tttgaaggtg aacgtcgtat tttaatcaat tcacctaaag
     9901 tcgcaacgta tgacttaaag cctgaaatga gtgcttacga agtgcgtgat gcattactta
     9961 aagagttgga taaaggtgag ttagacttga ttattcttaa ctttgccaac cctgacatgg
    10021 tagggcacag tgggatgtta gcgccaacaa ttaaagcaat tgaggcagta gatgaatgtt
    10081 taggtgacgt cgttgataaa attttagaca tggacggaca agctatcatt acagcggacc
    10141 atggtaactc cgatgaagta ttaacagatg acgatcaacc gatgacaaca catactacaa
    10201 acccagtacc tgtcattgta acaaaagaag gcatcacatt acgtgaaaca ggccgacttg
    10261 gcgatttagc accaacgtta cttgatttat taaatatcga acaacctgaa gatatgacgg
    10321 gtgaatcatt aattcaacat taaatcattt gagaaacaca gatgaatcgc tataatagca
    10381 ttaagtagtc aaatataaaa cggaataaag tatgttcaaa ccatattgaa tatatattta
    10441 taaattgatt gaaaaaggag atttaacatt atgccaatta ttactgatgt atacgctcgc
    10501 gaagtattag actcacgtgg taaccctaca gttgaggtag aagtattaac agaaagtggt
    10561 gcgttcggtc gcgcattagt accatcaggt gcatcaactg gtgaacacga agcagtagaa
    10621 ttacgtgacg gcgatgcgga tcgttactta ggtaaaggtg tagaaaaagc agttgaaaac
    10681 gtaaacgaaa ttattgcacc tgaattaatc gaaggcgagt tctcagtatt agaacaagtt
    10741 tcaatcgata aaatgatgat tcaattagat ggtactgcaa acaaaggtaa attaggtgcc
    10801 aatgcgattt taggtgtttc tattgcagtt gcgcgtgcag cagcagactt cttaggtcaa
    10861 cctttataca aatatttagg tggattcaat gcaacagtat taccaacacc tatgatgaac
    10921 attgttaacg gtggttctca ctcagacgca ccaattgcat tccaagagtt catgatttta
    10981 ccagtgggtg ctgagtcatt caaagaagct ttacgttggg gtgctgaagt attccacgca
    11041 ttagctaaaa tcttgaaaaa acgcggttta gttactgcag taggtgatga aggtggattc
    11101 gcgcctaaat tcgaaggtac tgaagatggc gtagaaacaa ttcttgaagc aatcaaagca
    11161 gctggtttag agccaggtaa agacgtattc ttaggttttg actgtgcatc atctgagttc
    11221 tatgaaaacg gtgtatatga ctacactaaa ttcgaaggtg aaaatgcagc gaaacttact
    11281 gctgaagaac aagtagacta cttagagcaa cttgttaaca aatacccaat tattacgatt
    11341 gaagatggta tggatgaaaa cgactgggaa ggttggaagt tattaactga acgtattggt
    11401 gatcgtgttc aattagtagg tgacgactta ttcgtaacaa atactgaaat cttatctaaa
    11461 ggtattgagc aaggtatcgg taactcaatc ttaatcaaag ttaaccaaat cggtacttta
    11521 actgaaacat ttgaagcaat cgaaatggca caaaaagcag gttacactgc ggttgtatca
    11581 caccgttcag gagaaacaga agatacaaca attgctgaca tcgctgttgc aacaaatgct
    11641 ggacaaatca aaacaggttc attatcacgt acagaccgta ttgcgaaata caaccaattg
    11701 ttacgtattg aagatgacct ttacgaaaca gctatatatg aaggcttaaa atcattctac
    11761 aacttaagca aataagtaga tgagattata atgttataat gagaggttag gacatcgcgt
    11821 tctaacctct tttttaacgg atatatcata gttggatacg gctttttgaa tatattttca
    11881 tcttatatga tataaaaaat aataatcata attttgctta taacttcaga gtaatttttg
    11941 attatactat gttattaacg atgactttaa atgatgtact gaagcaacgt tttctaatca
    12001 ctattaaa
//
LOCUS       DANHPA010000080        11678 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.080, whole genome shotgun sequence.
ACCESSION   DANHPA010000080 DANHPA010000000
VERSION     DANHPA010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 11678)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11678)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11678
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.080"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(145..1056)
                     /locus_tag="PTC28_001753"
     CDS             complement(145..1056)
                     /locus_tag="PTC28_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HDK5717033.1"
                     /translation="MSFKENEIIGTIEFLEVKSLEGSTYHLEGPNREKIKLNASEVNE
                     DDDLEIGESYSFFVYPNRSGDLFATQNMPDITVGRYDFVRVLNTDRDGARVDVGLPRE
                     VLIPWEDLPKLKALWPEKGDELLCTLRIDRDRQMFARLASKTTVHQMFTPVAADKIEE
                     LRNQMIQARPYRLLRVGTFLLSEDGYKIFVHESERQEEPRLGQACDVRIIGVNDKGEL
                     NGSFLPLAHERLDDDGEKIFNLLVEYEGELPFWDKSSPEAIKEVFNMSKGAFKRAIGH
                     LYKQRLINIETGKITLTRKGWTRVEEK"
     gene            1257..2867
                     /locus_tag="PTC28_001754"
     CDS             1257..2867
                     /locus_tag="PTC28_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDK5717034.1"
                     /translation="MLQVTDVSLRFGDRKLFEDVNIKFTPGNCYGLIGANGAGKSTFL
                     KILSGEIDSQTGHVSLGKDERLAVLKQDHFAYEDERVLDVVIKGHERLFEVMQEKDAI
                     YMKPDFSDEDGIRAAELEGEFAEMNGWNAESDAATLLSGLGIGTDLHDKTMSELENNQ
                     KVKVLLAQSLFGEPDVLLLDEPTNGLDIQAISWLEDFLINFDNTVIVVSHDRHFLNNV
                     CTHIADLDFGKIKVYVGNYDFWYQSSQLAQKMAQEQNKKKEEKIKELQDFIARFSANA
                     SKSKQATSRKKQLEKIELDDIQPSSRRYPFVKFTPEREIGNDLLFVENLSKTIDGEKV
                     LDSLSFTMNPNDKAVLMGESEIAKTTLLKILAGEMEPDEGSYKWGVTTSQSYFPKDNS
                     AYFEGVDMNLVDWLRQYAPENEQTETFLRGFLGRMLFSGEEVKKKASVLSGGEKVRCM
                     LSKMMLSSANVLLLDEPTNHLDLESITSVNEGLKSFKGSMIFTSHDFEFINTIANRVI
                     DLDVPGGLSKEISYEAYLEEKGILKSKA"
     gene            3508..4494
                     /locus_tag="PTC28_001755"
     CDS             3508..4494
                     /locus_tag="PTC28_001755"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HDK5717035.1"
                     /translation="MTKLAVVGATGLVGTKILETLDRKGIAFDELVLFSSARSAGQEV
                     TFQGQTYIVQELTDEATDGDFDYVLMSAGGGTSAHFAPLFESHGAIIIDNSSQWRMTE
                     DVDLVVPEVNAPTFKRGIIANPNCSTIQSVVPLKPLQEKYGLKRVAYTTYQAVSGSGM
                     KGKKDLEDGPKGVAPQAYPHPIYNNVLPHIDVFLDDGYTKEEQKMIDETRKILNEPTL
                     NVTATCVRVPVQDSHSVHMNVTLDQPATVEAIQALFEQDARVVLVDNPAKNEYPMAIH
                     STGRDEVFVGRIRKDDSLDNTFHIWVTSDNLLKGAALNAVQVLEQVLQLKGA"
     gene            4498..5376
                     /locus_tag="PTC28_001756"
     CDS             4498..5376
                     /locus_tag="PTC28_001756"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011303134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HDK5717036.1"
                     /translation="MSHIFEGTGVALITPFSNGEVDYEAIKRQVHFLIDNHIQSIVVN
                     GTTAENPTLTDEEKDRILTTVIEENAQRVPIIVGTGTNNTQKSIEASLRAKALGADAI
                     MLITPYYLKTSQRGLVAHFEAIANATELPVVLYNVPSRTNSTIEVDTVVRLSENPYIV
                     ALKDATNDFNYLAELQQRLDTDKFALYSGNDDNIVSYYEQGGHGVISVVANVIPNEFQ
                     QIYTNVKDRVARFEPIATLLDAMSVDINPIPIKYLAALEGFGQYEVRLPLVPLNNEEQ
                     QQLKAVYHQFKAGVQT"
     gene            5373..6095
                     /locus_tag="PTC28_001757"
     CDS             5373..6095
                     /locus_tag="PTC28_001757"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HDK5717037.1"
                     /translation="MKILLIGYGAMNQRVARLAEANGHNIVGVIAGRSTAHVPYPIYQ
                     KISEVTEADVAIDFSHPQLLLALLEEDFTLPLVIATTGEKTQITDKLQALSDKMPVFF
                     SANMSYGVHVLTKILEAAVPLLQDFDIELTEAHHNQKVDAPSGTLVKLYDVIESLRQD
                     VTPVYDRSQYDAKRTKNEIGIHTVRGGTIVGEHDVLFAGTDETITLSHRAQSKDIFAN
                     GALGAAEKLIHRQPGYYTFDNL"
     gene            6115..6834
                     /gene="dapD"
                     /locus_tag="PTC28_001758"
     CDS             6115..6834
                     /gene="dapD"
                     /locus_tag="PTC28_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-acetyltransferase"
                     /protein_id="HDK5717038.1"
                     /translation="MVKNFTAEEIIQYISDAKKATPIKVYINGEFSDVQFPDQFKVFG
                     SENSKVIFCEASDWHAFYEENQMLIEDLEIEMDRRNSAIPLKDLINTNARIEPGAFIR
                     EHAVIGDGAVVMMGATINIGAIVGEGTMIDMNATLGGRATTGKNVHVGAGAVLAGVIE
                     PPSASPVVIEDNVLIGANAVILEGVRVGEGAIVAAGAIVTQDVPAGAVVAGTPAKVIK
                     QAHEVEDSKREIVAALRQLDQ"
     gene            7019..8173
                     /locus_tag="PTC28_001759"
     CDS             7019..8173
                     /locus_tag="PTC28_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011303131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDK5717039.1"
                     /translation="MNELEFVTQHRRYLHQHPELSLQEHETTQYLQRFLESLDIPYER
                     PLETGIIGFLKGQSDETIAFRADIDALPIHEQNDVDYRSTVDDRMHACGHDGHTTALM
                     LFAQRCKALYDNDELPHNVLFIFQPAEESGGGANLLIKANAFASYDIKAIYGVHVMPF
                     VEEGSVVIRDNEITASATEFRFFIEGESSHVANKEQGQSAGEALQHIMMQLSQIQQYH
                     LNGLQRNIVHIGHFHAGEAINTVPSNGYLEGTIRTYDMDDLSIIQGQMQKISDSAELL
                     FGVKSEVRFAEGYPPTINDPALKKYVIESLEYNQLNVIENELPYLFGEDFSFYGRIAP
                     AYFVFVGIRNEEKQFVTGLHTPHLNFDERMLIRIADYYERLLMNYNEVEA"
     gene            8170..9249
                     /gene="alr"
                     /locus_tag="PTC28_001760"
     CDS             8170..9249
                     /gene="alr"
                     /locus_tag="PTC28_001760"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000127604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HDK5717040.1"
                     /translation="MTALWQVDSAQFLQNVKQVTQNQSVMAVVKNNAYNYGLDFAVQM
                     FQQAGIDTFSTTSLVEAVRIRELAPEATIFLMNATDEFERLRANDIHMTLPSLTFYRE
                     NKAALAGVKVHLEYENLLHRSGFKTKDELLAVLADHEQNPAPKMEITGLWTHFGYADE
                     FDVDMYEKEREAWLTIVETLVKQRGYHFDLIHAQNSASYYREGQRVFDHHTHARIGIA
                     LYGSRPYASLSPGCITQALTVKANVIQVRNVQQGDHCGYSFAYTVEQPHTRLAVVDVG
                     YGDGILRTRAQHDVSINGKRYPIRALMMSHMFVEVDDTVSAKDSVILYNNSDLRIDDY
                     TFKGVGANSEQLSALNLNSLIKEYV"
     gene            9250..10515
                     /gene="lysA"
                     /locus_tag="PTC28_001761"
     CDS             9250..10515
                     /gene="lysA"
                     /locus_tag="PTC28_001761"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HDK5717041.1"
                     /translation="MTVSYNQNGELTLGGTSLKTLAQSFGTPTIVYDEAQIRQQMRRY
                     HSAFQQNDIGYVLSYASKAFTCLQMVKLAAEEDFELDVVSEGELYTALEAGFDPQRIH
                     FHGNNKTKHEIRYALESGIGYFVVDALDEIDLIEQYATKPVDVLLRVNPGVEAHTHEF
                     IQTGQEKSKFGLSLKHGLALEAVEKIRNTNNIVLKGIHFHIGSQIEETTGMIETAKMV
                     LNWLDEHAITIDLLNLGGGFSAQYVEGDQSFDIEAGITEIVQAIKAECQQLKYPIPTL
                     SIEPGRSIVAEAGVTLYEVGTIKDIPGVNKYVSIDGGMSDHIRTALYDAKYQALLINR
                     NETPDETVTIAGKLCESGDIIIHEAKLPSSVKRGDYLAILATGAYHYSMASNYNQMQK
                     PSVFFVKDGKAREVVKRQSLRQLIINDVK"
     gene            complement(10637..10819)
                     /locus_tag="PTC28_001762"
     CDS             complement(10637..10819)
                     /locus_tag="PTC28_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717042.1"
                     /translation="MKKVDYEKLYQMRSEIHKLLKDRKLLDVEDLPIETFNPAEGFSE
                     LTDEAFEYLTFGVKLE"
     gene            complement(11354..11554)
                     /gene="cspA"
                     /locus_tag="PTC28_001763"
     CDS             complement(11354..11554)
                     /gene="cspA"
                     /locus_tag="PTC28_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock protein CspA"
                     /protein_id="HDK5717043.1"
                     /translation="MKQGTVKWFNAEKGFGFIEVEGENDVFVHFSAINQEGYKSLDEG
                     QSVEFEVVEGDRGPQAANVVKL"
BASE COUNT         3741 a         2011 c         2379 g         3547 t
ORIGIN      
        1 ggatttcaaa aattaagttg atagggatga actaagtgaa ttttagtgta agaatgttgg
       61 aatttatgga gatttggcat ttgtgtgggt atttaagatc aaaaaaagac tcaccacttg
      121 ggcaagtctc tcatgaatga ttaactattt ctcttctaca cgtgtccaac ctttacgtgt
      181 caaagtgatt ttacctgttt caatattgat gaggcgttgt ttgtataaat gaccaattgc
      241 acgtttgaat gcacctttgc tcatattaaa tacttcttta attgcttcag ggctagattt
      301 atcccagaat ggcaactcgc cttcgtattc cacaagtaaa ttaaatattt tttcgccatc
      361 gtcatctaac cgttcatgtg caagtggtaa aaatgaacca tttaactccc ctttatcatt
      421 tacaccgata atacggacgt cacatgcctg ccctaaacgc ggttcttctt gacgttctga
      481 ctcatgtaca aaaattttat agccgtcttc tgataataaa aatgtaccaa cgcgtaataa
      541 acgatatgga cgtgcttgta tcatttgatt acgtagttct tctattttat ctgctgcgac
      601 aggtgtaaac atttggtgca ctgttgtttt tgaagctaaa cgtgcaaaca tttgtctatc
      661 gcggtcaata cgtaatgtac ataatagttc gtcgcctttt tctggccata atgccttcaa
      721 tttaggtaaa tcttcccatg ggattaatac ttcgcgaggc aatccaacat ctacacgtgc
      781 cccatcacga tctgtgttta acacgcgtac aaaatcatac cgtccaacag taatatctgg
      841 catgttttga gtggcaaaca aatcgccaga acggttagga tagacaaaaa agctatacga
      901 ctcccctatt tctaaatcgt catcttcgtt tacttcagat gcatttaatt taattttttc
      961 tcggtttgga ccttctaagt gatatgtaga accttcaagc gacttcactt ctaaaaattc
     1021 tatcgtccca ataatttcat tttctttaaa agacataacg tactcctctt taattgataa
     1081 gttaattcta ttatagcatg ttgatatgtg ttaagcagtg aaataatgaa atctcttgaa
     1141 caacgtctat gtttttagct gaaatgatgg tagaaaatac aacagaaatt agatttataa
     1201 ggcattctca tgatataatg catccattag aataattgaa ttaaaggaga aaatgcatgt
     1261 tacaagttac ggatgtaagt ttacgttttg gtgatcgtaa attatttgaa gatgtgaaca
     1321 ttaagtttac accaggaaat tgttacggtt taattggtgc gaatggtgcc ggaaaatcta
     1381 ctttcttaaa aattttatca ggtgaaattg attcacaaac aggtcacgtg tcactcggta
     1441 aagatgaacg tttagcagtc cttaaacagg atcactttgc gtatgaagat gagcgcgtgc
     1501 tagacgttgt tattaaaggt catgaacgat tgtttgaagt gatgcaagaa aaagacgcta
     1561 tttatatgaa acctgatttc agtgacgaag atggtattcg cgcagcagaa cttgaaggtg
     1621 aatttgctga aatgaatggt tggaacgcgg aatctgacgc tgcaacatta ttatctggtt
     1681 taggcattgg tacagacttg cacgataaaa caatgtcaga gcttgaaaat aaccaaaaag
     1741 tgaaagtgtt actcgctcaa agtttgttcg gtgagcctga tgtactctta ctggatgagc
     1801 cgacaaacgg tttggatatt caagcgatta gttggttaga agacttctta attaactttg
     1861 ataatacagt gatcgttgtt tcccatgacc gacacttttt aaataatgtt tgtacacaca
     1921 ttgctgactt agacttcggt aaaatcaaag tttatgtcgg aaactatgac ttctggtatc
     1981 aatctagtca attagcacaa aaaatggcac aagaacaaaa taagaaaaaa gaagagaaaa
     2041 ttaaagagtt acaagacttt attgcacgtt tctctgccaa tgcctctaag tctaaacaag
     2101 ctacgagccg taaaaaacaa cttgagaaaa ttgaattgga tgatattcaa ccgtcttcac
     2161 gtcgttatcc tttcgtaaaa tttacgccag aacgcgagat tggtaatgat ttattatttg
     2221 ttgaaaatct ttctaaaaca attgacggtg aaaaagtgtt agattcatta tcattcacga
     2281 tgaacccaaa tgacaaagcg gttttaatgg gcgaaagtga aatcgcaaaa acaacactac
     2341 ttaaaatttt agcgggcgag atggaaccgg atgaaggcag ctataaatgg ggtgtgacaa
     2401 catcacaaag ctacttccct aaagataact cagcgtattt tgaaggcgtt gatatgaact
     2461 tagtcgattg gttaagacaa tatgcgccag aaaatgaaca aactgagaca tttttacgtg
     2521 gtttcttagg acgtatgtta ttcagtggtg aagaagtgaa gaaaaaagca agcgttcttt
     2581 ccggtggtga gaaagtacgt tgtatgttaa gtaaaatgat gctttctagt gcgaacgtat
     2641 tgttattaga tgagccaaca aaccatttag atttggaaag tattacatct gtcaatgaag
     2701 gtttgaaatc atttaaaggg tctatgattt tcacatcgca tgactttgag tttattaaca
     2761 ctattgcgaa tcgtgtcatt gatttagatg tgcctggtgg tttatcgaaa gaaatttctt
     2821 acgaggccta cttagaggaa aaaggtattt tgaaatctaa agcataatca ttatttaacg
     2881 ggatgatatg atgtcatctc gtttttttga gtaaatcgga tgcatatgta ggtctccccc
     2941 attgcatata ctgacttaag ataatagtct tttcaaactt aattctacat cacgttactt
     3001 ataaaaaggt cgacaattga acctaaaaga atgctgaaat ttttgatgta ttttaaaatt
     3061 ttcagcattt tctgtttaca catgatgact ttctatgtat aatggtatcc ataataattg
     3121 aatagttatt gatgaggcgc atcgatcata agtagatata ttgaagtcat gtctgcaaac
     3181 attgtatatc gaaagggtga gatgccgaaa cgaacagtat tgcaggtact tgtttgttgg
     3241 attctctggt taagagctaa gaatctgtca ttattgttac aataatggag tgcatcactt
     3301 gtatatagag ttgacaagtt cgcacgccga gcttgttttt tatttatcat ttttgaagcg
     3361 gtctggatat cagtgatatt tgccctcttc aacaagtgct ctagtaatca acatcaagtg
     3421 ccaatctgta ctaccaatag ttcaattatt atctaaattt taagaacatt acaatatttg
     3481 tgaattgaaa aaatggagtg aagtggaatg acaaaattag cagttgtagg tgcaacagga
     3541 ttagtaggaa caaagatttt agaaacactt gatcgtaaag gtattgcttt tgatgaactc
     3601 gtgctttttt cttcagcacg ttcagcaggt caagaagtca cgtttcaagg tcagacgtat
     3661 atcgtgcaag aattgacaga tgaagcgacg gatggtgatt ttgattacgt cttaatgagt
     3721 gcaggtggcg gtacgagtgc tcattttgcc ccactgtttg aatcacacgg tgccatcatt
     3781 attgataatt caagtcaatg gcgcatgacg gaagacgttg accttgtcgt acctgaagtt
     3841 aacgccccta cttttaaaag aggtattatt gctaacccaa actgttcaac gattcaatcg
     3901 gtcgtaccac tgaaaccatt gcaagaaaaa tatgggttaa aacgtgtggc atacacgact
     3961 tatcaagctg tatcggggtc aggtatgaaa ggtaaaaaag acttagaaga cggtccaaaa
     4021 ggtgtggcgc ctcaagctta tccacatccg atttataaca acgtactacc tcatattgat
     4081 gtctttttgg atgatggtta tacaaaagaa gaacaaaaaa tgattgacga aacaagaaag
     4141 attttaaatg agccgacttt aaatgtcaca gcaacttgtg tacgtgtacc ggtacaagat
     4201 agtcatagcg ttcatatgaa tgtgacgtta gaccaaccgg caacagtgga agctatacaa
     4261 gcgctttttg aacaagatgc gcgtgttgtc ctcgtagata acccagccaa aaatgaatat
     4321 ccaatggcga ttcattcaac aggtcgtgat gaagtgtttg tcggacgcat tcgtaaagac
     4381 gattcgttag acaatacatt ccacatttgg gtcacttcag acaatttatt aaaaggtgct
     4441 gcgcttaatg cagtccaagt gttagaacag gtacttcaat tgaaaggagc ataaattatg
     4501 tcacatattt ttgaaggcac aggcgtcgct ttaatcaccc ctttttcgaa cggtgaagtg
     4561 gattatgaag cgatcaaaag acaagttcat tttttaatcg acaatcatat tcaatccatc
     4621 gtggttaacg gcacgacggc tgaaaatcca actttgacag atgaagaaaa ggatcgtatt
     4681 ttaacaacag taatagaaga aaatgcacaa cgtgtcccta ttattgtagg aactgggacg
     4741 aataacacgc aaaaatcaat tgaagcgtca ttacgtgcaa aggcattagg tgcagatgcg
     4801 attatgctca tcacaccgta ttacttaaaa acgagtcagc gtggtttagt tgcccatttt
     4861 gaagccattg cgaatgcgac agaactgcct gtagtccttt ataatgtgcc atcaagaaca
     4921 aactcaacaa tcgaagtgga tacagtcgtt cgtttaagtg agaatccata tatcgttgcg
     4981 ttaaaagacg cgactaatga ttttaattat ttagcagaac ttcaacaacg cttagataca
     5041 gacaagttcg cattgtatag tggcaacgat gataatattg tgtcatatta tgaacaaggt
     5101 ggtcatggtg tcatttcggt cgttgcgaat gtcatcccga atgaattcca acaaatttat
     5161 acaaatgtga aggatcgagt agcgcgcttt gaaccgattg ccacccttct tgatgcgatg
     5221 agtgtcgata ttaatcctat tccaatcaaa tatttggcag cgttagaagg ctttgggcaa
     5281 tatgaggtgc gattgccttt agtaccactg aataacgaag agcaacaaca gttaaaagca
     5341 gtttaccatc aatttaaagc aggtgttcag acatgaaaat tttattaatt ggatatggcg
     5401 caatgaacca acgtgtcgcg cgattagctg aagcgaacgg tcataatatt gtaggcgtca
     5461 ttgcaggtcg ttcaacggcg catgtgccct atccgattta ccaaaaaatc agtgaagtga
     5521 cagaggcaga tgttgcgatt gacttttcac atccacaatt gttactggct ttactagagg
     5581 aagatttcac actccccctt gtcattgcaa caacgggtga aaagacacaa attactgata
     5641 aacttcaagc gttaagtgat aaaatgccag tatttttcag tgctaatatg agttatggtg
     5701 tccatgtact caccaaaata ttagaagcgg cagtcccttt actgcaagac tttgacattg
     5761 aattaacaga agcacatcat aatcaaaaag tggatgcgcc aagtggcacg ctcgttaaac
     5821 tttatgatgt gattgaatcg ttacgacaag atgtcacacc tgtttatgac agaagtcaat
     5881 acgatgcgaa acgtacgaaa aatgaaattg gtattcatac ggtgcgtgga ggtacgattg
     5941 tcggtgaaca cgatgtctta tttgctggaa cagatgaaac gattacactg tctcaccgtg
     6001 cccagtcaaa agatattttt gcgaatggtg cgttaggtgc agcagaaaag ttaattcacc
     6061 gtcaaccagg gtattatact tttgataact tataaaagga gcgtataaaa cgttatggtt
     6121 aaaaatttta cagctgaaga aatcatccaa tatattagtg atgcaaaaaa agctacaccg
     6181 attaaagttt atatcaacgg tgaattcagt gacgtgcaat ttccggacca atttaaagta
     6241 tttggttcag aaaattcaaa agtcattttt tgtgaagcat cagattggca cgcattttat
     6301 gaagaaaatc aaatgctaat tgaagactta gaaatcgaaa tggaccgccg taattcggcc
     6361 attccattaa aagacttaat caatacgaat gcacgaatcg aaccaggcgc atttattcgt
     6421 gaacatgccg tgattggaga cggtgcagtc gtcatgatgg gtgcaacgat taatattggt
     6481 gccattgttg gtgaaggcac aatgattgat atgaatgcga cattaggtgg tcgtgcaact
     6541 acaggtaaaa atgtccacgt cggtgctggt gcagtattag caggtgtaat tgaacctcca
     6601 agtgcctctc ctgttgtcat tgaggataac gtattaattg gagcgaatgc cgttattctt
     6661 gaaggcgtac gtgtcggtga gggtgcgatt gttgctgcgg gtgccattgt gacgcaagat
     6721 gtgccagcag gtgctgttgt tgcggggaca ccggcgaaag tgatcaaaca agcgcatgaa
     6781 gtagaagatt caaaacgtga aattgtcgca gcgttacgtc agttagatca gtaatatata
     6841 tgggcgtcct atcatatctc ttatcgtcgg cgtccaacgt tggcgatgaa acctcaaact
     6901 gattgtattt aataacttat gtattctgtt tgagtatctt ctaccgagga tgaacataat
     6961 gctaaattta tgactcatcc tcttctcttt ttatacataa tgatgggagt gaaagcatat
     7021 gaatgaactt gaatttgtca cgcagcatcg tcgatatctt catcaacatc ccgagctgag
     7081 tcttcaagaa catgaaacaa cacaatattt acaacgtttt ttagagtcat tagatattcc
     7141 ttatgaacgc cctcttgaaa cgggcattat aggtttttta aagggtcaaa gtgatgaaac
     7201 gattgctttt agagcagata tcgatgccct accgatacat gaacaaaatg atgtggacta
     7261 tcgtagtaca gtagatgatc gtatgcatgc ttgtggccat gatggtcata cgacagcgct
     7321 gatgctattt gcacaacgtt gtaaagcatt atatgacaac gatgaattgc cacataatgt
     7381 attatttatt tttcaacctg ctgaagaatc aggtggtggt gcgaatttat tgattaaagc
     7441 gaacgcattt gcatcatatg acattaaagc aatctatggt gttcatgtca tgccttttgt
     7501 cgaagaaggc tctgtagtca ttcgtgataa tgaaattacg gcaagtgcga cagaattccg
     7561 cttttttatt gaaggtgaat cgagtcatgt tgccaacaaa gaacaaggtc aatctgcggg
     7621 agaagcgtta caacacatca tgatgcaatt gtctcaaatt caacagtatc atttgaatgg
     7681 gctgcaacga aatatcgtcc atattggtca ttttcatgca ggagaagcga ttaatacagt
     7741 tccaagcaat ggttacttag aagggacgat tcgcacgtat gatatggatg atttaagcat
     7801 catacaaggg caaatgcaaa aaattagtga cagtgcagaa ttgttattcg gcgtaaagtc
     7861 tgaagtacgc tttgcggaag gttatccacc gacaataaat gatcctgcat taaaaaaata
     7921 tgtcatcgaa agtcttgaat acaatcaact caatgtcatt gaaaatgaac tgccctactt
     7981 atttggtgaa gacttcagct tttatggtcg aatcgcaccg gcgtatttcg tttttgtcgg
     8041 gatacgtaac gaagaaaagc agttcgtgac aggtttacac acaccacatt tgaactttga
     8101 tgaacgcatg ttgattcgta ttgcagatta ttacgaacgc ttgttaatga actataatga
     8161 ggtggaagca tgacagcatt atggcaagtc gattcagccc aatttcttca aaatgtgaaa
     8221 caagtaacgc aaaatcaatc tgttatggcg gttgtgaaaa ataatgcgta caattacggt
     8281 ttggattttg ccgtacaaat gtttcaacaa gcaggtattg acacgttcag tacgacgtcg
     8341 ttagttgaag cggtacgtat ccgagaactt gcgccagaag caacgatatt tttaatgaat
     8401 gcgactgatg aatttgaacg tttgagagcg aatgatatcc atatgacgtt gccttcctta
     8461 acgttttatc gtgaaaataa agcagcttta gcgggtgtga aagtgcatct agaatatgaa
     8521 aatctactcc atcgttctgg ctttaaaaca aaagatgaat tactggccgt tttagctgat
     8581 cacgagcaaa atccggcacc taagatggaa attactggtt tgtggacaca tttcggttat
     8641 gcggatgagt ttgatgtcga catgtatgaa aaagaacgtg aggcatggtt gactattgtg
     8701 gagacactcg tgaaacaacg agggtatcat ttcgacctca ttcatgctca aaacagcgcc
     8761 agttattata gagaaggtca acgtgtattt gatcatcata cgcatgcacg tatcggtatt
     8821 gcgttatatg gttcacgccc gtacgctagc ttgtcacctg gttgcattac acaagcattg
     8881 acagtaaaag caaatgtgat tcaagtgcga aatgtccaac aaggcgatca ctgtggatac
     8941 agttttgctt atactgttga acaaccgcat acacgtttag cggttgtaga tgtcggatat
     9001 ggggatggca ttttaaggac aagagcacaa catgacgttt caatcaatgg caaacgttat
     9061 ccgattcgtg cgctcatgat gagtcatatg tttgttgaag tagatgacac agtatcagca
     9121 aaagatagcg tcattttata taataattca gatttgcgta ttgatgatta cacgttcaaa
     9181 ggtgtcggcg caaactctga acaactcagt gcattaaatt tgaattcgtt aataaaggag
     9241 tatgtttaaa tgacagttag ttataatcaa aatggtgaat tgacattggg aggaacaagt
     9301 ttaaaaacgt tagcacaaag tttcggtacg ccgacaattg tgtatgatga agcgcaaatt
     9361 cgtcaacaaa tgagacgcta tcacagtgct tttcaacaaa acgatatcgg ttatgtgtta
     9421 tcttatgcat caaaagcatt tacttgtctt caaatggtaa aacttgcggc tgaagaagat
     9481 ttcgaattgg acgtcgtatc agagggagaa ctttacacag cattggaggc aggatttgac
     9541 ccccaacgca tccattttca tggcaacaat aagacaaaac atgaaattcg ttatgccctt
     9601 gaaagtggta tcggttattt cgtcgttgat gcgttagatg aaattgacct cattgaacag
     9661 tatgccacaa aacctgtaga tgtactgtta cgtgtgaatc caggtgttga agcgcataca
     9721 catgaattta tccaaacagg acaagagaaa agtaaattcg gtctttcatt aaaacatggt
     9781 cttgctttgg aagcagttga aaaaatccgt aatactaata atatcgtgtt gaaaggtatt
     9841 catttccata tcggttcaca aattgaagaa acaacaggta tgattgaaac ggctaaaatg
     9901 gtgttgaatt ggttggacga acatgcgatt acgatcgatt tacttaactt aggtggtggc
     9961 tttagtgcac aatacgttga gggtgaccaa tcattcgaca ttgaagcagg tattacagag
    10021 attgtacaag cgattaaagc agaatgtcag caattgaaat accctatacc aacattgagt
    10081 atcgagccgg gccgttctat cgttgcagaa gcgggtgtaa cgctatatga agttggtacg
    10141 attaaagata ttcctggtgt caacaagtat gtatctatcg atggcggtat gagcgatcac
    10201 atccgtacag ctttatacga cgcgaaatat caggcgttat taattaatcg taatgaaaca
    10261 cctgatgaaa cagtaaccat agcaggaaaa ctatgtgaat caggtgatat tattatccat
    10321 gaagcaaagt taccgtctag tgtaaaacga ggtgattatt tagcaatatt agcgacaggt
    10381 gcgtatcatt acagtatggc ttcgaattat aaccaaatgc agaaaccaag cgtcttcttt
    10441 gtgaaagatg gtaaagcaag agaagtcgtg aaacgtcaat cgttacgcca attgattatt
    10501 aatgatgtga agtaagtact atttatgata tgaaagccat aaatgattga ttcgttagat
    10561 aaacgctttt gacatactga tttgcgataa agtaattata aaaaaagagc acctcgcctt
    10621 tttatcggtt aggtgcttat tcgagtttaa ctccaaacgt taaatattca aacgcttcat
    10681 ctgttaattc tgaaaaccct tctgctgggt taaatgtttc aatcggcaag tcttcaacat
    10741 ctagtaactt tctatctttt aaaagtttat gtatttctga cctcatttga taaagttttt
    10801 cataatcaac ttttttcaca aactcccccc ttttggatag tcgcttaaaa ttgagtggta
    10861 aatctgctga aaaaatgatc tacagtatta tcagttgttt atttttgttt atcttgcttt
    10921 ctatttctgc ttgctcattc ttttgttctt tttaatgatt tcaagaaacg gtttagttac
    10981 atcttcaggt gacatatact cgtctaatgt agttaaaaaa tctaattgta tcatcctact
    11041 ttatagtaac tctatcctta atataaaaat tcttaaacag tttccaccta cacgagccat
    11101 gctattctag agtttttgaa aatgtttaac atgttactgc aaaatgaaat ctatgtcgtt
    11161 tagttgtgag ttctaaacta tgaaatatca ttgattaagt gaccaaattt gaatgagaaa
    11221 ttgataataa agatgaaata atgaggcgca taataagagg tgtttttata acagaataaa
    11281 aacatttaaa aaaacaaaaa aacagcgaag cgagcttcac tgcttttttc taagtcaata
    11341 ttgcatctat ttattatagt tttacaacgt ttgcagcttg aggaccgcgg tcgccttcaa
    11401 ctacttcaaa ttcaactgat tgaccttcat ctaatgattt gtaaccttct tggttgattg
    11461 cagagaagtg tacgaatacg tcgttttctc cttctacttc gataaaacca aaaccttttt
    11521 cagcgttaaa ccattttact gtaccttgtt tcataatctg tgaaacctcc aagactaaaa
    11581 ttcaatatgc gctattcgca tattacaaaa aatactgatt cattctttat aaattcgata
    11641 aataaaaact gaaaaatatt ctttgcaata tggaataa
//
LOCUS       DANHPA010000081        11406 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.081, whole genome shotgun sequence.
ACCESSION   DANHPA010000081 DANHPA010000000
VERSION     DANHPA010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 11406)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11406)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11406
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.081"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(127..1116)
                     /locus_tag="PTC28_001764"
     CDS             complement(127..1116)
                     /locus_tag="PTC28_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative sulfate exporter family transporter"
                     /protein_id="HDK5717044.1"
                     /translation="MSKVKGLCLTLTIAIIATLFGHFFPIVGSAIFAMVIGMVLNNTL
                     KLPESFKPGIQYSSKKVLHYSIILLGFTLSFQSIGTVGLKSLPILIVTLLVAFVVVTL
                     LVKLFHIDLDTGILIGVGTSICGGSAIAATSPVIKAKDNIIAFSLSTVFLFNLIAVII
                     FPPIGHFFHMSQEAFGFFSGTAINDTSSVVAASALYGSKALEVATIVKLTRTLFIIPI
                     TIGLAFWVAKRQQATNDSGQRQNIWAMIPNFIIWFIVASLVSTIFNFSDGIIAIFKQA
                     ALFFITIALAGVGLSVKFSQFKQAGIRPILLGMMTWAALIVTSLIILAMIGML"
     gene            1350..2996
                     /locus_tag="PTC28_001765"
     CDS             1350..2996
                     /locus_tag="PTC28_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-keto acid decarboxylase family protein"
                     /protein_id="HDK5717045.1"
                     /translation="MMKKRIGQFLIDEIAKQGVDKIFGVPGDFNLTFLDDIEAHETLE
                     WVGNTNELNASYAADGYARLNGLAAMVTTFGVGELSAVNGIAGSYAENVPVIQITGAP
                     TTVVEQAGKYVHHSLGNGKFDDYQKMYAQITETQTVLTVDNALTEIPRIIKVATEEKR
                     PVHVHLPIDIAAKEIEVPDDVAYPATQKAENVSTVVEKLTERLKAAQQVTLIVGHQIN
                     SYGLQKDVQAIAEKLNLPVAQLSLGKGSFNEESAQYMGVYDGYIAEDNIRDYVDGSDL
                     VITLGAKLTDSATAGFSQKFSNDTIVTLNHRDVKVGDYTTTEPSLPEIVEAFKNIDFK
                     YGGDFPQYQWPDVSAAVYNDEPLTQENYFNLMQNFLRKGDVILGEQGTSFFGAYRLAL
                     QEGTTFIGQPLWGSIGYTLPSTLGTLLAAPERRHVLLIGDGSLQLTAQEMSTMVRQNL
                     NPVIFIINNDGYTVEKKIHGENAKYNDIQMWDYKLLPALFGNKDIPTYDVKTSNDLKV
                     AMDQIDQNPDTMHVVEVHMDVLDAPANLNEISKAFAAQNK"
     gene            4087..5490
                     /locus_tag="PTC28_001766"
     CDS             4087..5490
                     /locus_tag="PTC28_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HDK5717046.1"
                     /translation="MNIAYRVLDAPINPETLARHRQHKIVLESATTSQTKGRYSVVAF
                     DAYGEVILTESQLNILAPHQTIQETTAPFEQLKAFVGQYHAQISEPELEVLPFISGFV
                     GYCSFDLVRHAFPVLQQYPAAGTTHDVHFYMIESVYVFDHYKEQIYVIATNLFSKATE
                     HELYERLDEMIAEFNQIELFETTQVPDLPEKVIEPNIDEATFIAQVQQFKGRIQQGDM
                     FQVVPSRIYRYAHHFGEQLHPLTYQLYQKLKRNNPSPYMFYFNMGGPILVGSSPESFV
                     KVKAGKVMTNPIAGTIKRGTTDEEDQQLAETLLSDEKELSEHRMLVDLGRNDILRIAQ
                     PGSLELTKLMTIERYEHVMHIVSEVIGDVDPTLSPIDVIASLLPTGTVSGAPKLRAIQ
                     RIYETQPLKRGVYSGGVGYINCDHTLDLALAIRTMVIDETYVHAEAGCGVVYDSIPEK
                     ELAETQLKAKSLLEVTL"
     gene            5487..6071
                     /locus_tag="PTC28_001767"
     CDS             5487..6071
                     /locus_tag="PTC28_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HDK5717047.1"
                     /translation="MILVIDNYDSFTYNLVDMFRLKEDVVVKYPDDDTLYDLQPDALV
                     ISPGPGHPDDTTRLHEIIEHFKGIPILGICLGAQALYRYYGGRVVVASKVMHGKIDTL
                     QFEKPTLLYKGISEHSDIMRYHSLICEEQSLPKGIHITGRTSDSIQSFEHRVRPHYGI
                     QYHPESFASIAVSGIVENFLTIVKKGVLPHDVTE"
     gene            6055..7059
                     /gene="trpD"
                     /locus_tag="PTC28_001768"
     CDS             6055..7059
                     /gene="trpD"
                     /locus_tag="PTC28_001768"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HDK5717048.1"
                     /translation="MTLLNKMMNFEALNHEEMGAFIATLLSETTPLEDKVALLVAYTM
                     KGETSDELYALCESLIHTMYPEQPQYLGSMCVCGTGGDGSNSFNISTTVSFVAASGGI
                     EVVKHGNKSVTSQSGGMDILQAMGIATTPVQSVVQQLKDTHLAFVSATESYPVMKNMQ
                     PVRVKVGRPTILNLVGPIINPFALDYQSMGVFDPTRMIKIAEVLQRLGRKRAIVIHGA
                     NGMDEATLSGDNQIVEMDQTIGIREYTVNAADYGLRYAPDEALRGGTPEENKEITLNI
                     LNGTDQSVRRDVVLLNAGLAFYTAEIVDTIEAGIAHAVSCIDSGAAFKQYEQAGGVVV
                     "
     gene            7056..7835
                     /gene="trpC"
                     /locus_tag="PTC28_001769"
     CDS             7056..7835
                     /gene="trpC"
                     /locus_tag="PTC28_001769"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HDK5717049.1"
                     /translation="MTILDDIVEYKKQLLAEGYYETLLNNLEEVAVSHKRTVAEQFEN
                     DRTIGVIAEIKSKSPTVLDIPDRNLEEQLRLYTAGGASAISILTDEQYFGGSYERMAA
                     LTKQTDVPVLCKDFMIDERQIDVAKKAGASMILLIVNILTDEALARLHDYATALGLEV
                     LVEVHDRQELARAHRIRPQFVGVNNRDLRSFKTDVSHTGQILTSRHPGIHYISESGIK
                     TVSDIETLVPTRIAGVLIGETLMKANDPQAELQSFKLRKEV"
     gene            7837..8460
                     /locus_tag="PTC28_001770"
     CDS             7837..8460
                     /locus_tag="PTC28_001770"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HDK5717050.1"
                     /translation="MYLKFCGFTQEEDIREAVQHDIQAVGFITYPKSARYVDLAQLQK
                     LTAHVPKTMDRVAVTVNTTMAQLEAIIEQTAINTIQFHGTESIDMIATVKARYPDIQL
                     FKAIPADEKLSDNIERYGNVVDRLLIDTPSSAFGGTGQVFDWRVLDTLSTSNCLVAGG
                     VNSENVRQLIQRHPNIAGIDIASGIEKAKGQKDHDKMAYIVKVLKGE"
     gene            8463..9668
                     /gene="trpB"
                     /locus_tag="PTC28_001771"
     CDS             8463..9668
                     /gene="trpB"
                     /locus_tag="PTC28_001771"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HDK5717051.1"
                     /translation="MKNIQLEADEHGFFGEYGGKYVPETLMPAIEELKKAYDAAKQDP
                     EFQRDYHHYLKHYVGRETPLTYADSYTKALGGAKIYLKREDLNHTGAHKINNAIGQAL
                     LAKRMGKKKLVAETGAGQHGVASATIAALFDMELVVFMGEEDIRRQQLNVFRMELLGA
                     EVVPVTDGQGTLSDAVNKALQYWVAHVDDTHYLLGSALGPDPFPTMVRDFQRVIGDEI
                     KAQLQEKEGRLPNAVVACVGGGSNAIGTFYPFIEDASVKLYGVEAAGEGIDSERHALA
                     INKGKKGVLHGTKMYLIQDDNHQIKLAHSISAGLDYPGVGPEHSYYHDIGRVDYVTAD
                     DKEAMEALVRFTKAEGIIPAIESAHALSYVEKLAPQLDKDDILVVTVSGRGDKDMETI
                     KHYMEEKEA"
     gene            9671..10420
                     /locus_tag="PTC28_001772"
     CDS             9671..10420
                     /locus_tag="PTC28_001772"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HDK5717052.1"
                     /translation="MHAKQFVAYIMGGPEFIAQLKALDEVGADYVEIGTPFSDPVADG
                     PIIMEAGQAAIRAGMTAQKIFDQLKTVNGQLNTRYLLMTYYHTIETYGEAAFMAEAEA
                     AGVEGLIIPDMPFEYIEQLKARYPEQQLKFISLIAMTAAPERRQRIAQSAEGFIYTIT
                     MNQITGQNGNFHPELKQNILDIKQHSDVPVMAGFGIRTPEHVQEIIEVADGVIIGSEI
                     VRRFNEEGIEATKQYLARVREALGKHRSTAQ"
     gene            10540..11250
                     /locus_tag="PTC28_001773"
     CDS             10540..11250
                     /locus_tag="PTC28_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDK5717053.1"
                     /translation="MNKVMIFDLDDTLYDQLSGFEYAYYRHFGDTDIGVGRLYRHFRL
                     YSEELFEATQTGALSVPDMHVVRITRAVADFDIELPEEKARAFQRDYEHAQQHIKLST
                     TIVEMLQYLVQKNVKLGLLTNGESDRQRAKIKALGLDQYIPKSNMFVSAELGLSKPDP
                     AIFETVGKQMDVGASDAYFIGDHFDNDILGAMQVGWKAIWYNRRNRPQTDMTKQPTKT
                     VMTEKALFEAIQNIIESA"
BASE COUNT         3714 a         2064 c         2554 g         3074 t
ORIGIN      
        1 agtgttaaaa aaagatgcat atgtttaaga atggcgtgaa atcaacgttt gttgtttgat
       61 ggagaaaatg aaaaagaagg gaggcccgtc gtgcgaatgc acagtatgtc tccctataga
      121 gtaattttat aacatgccga tcattgctaa aatgatcaaa cttgtcacaa ttaaagcagc
      181 ccaagtcatc attcctaaca agatagggcg aatacctgct tgcttaaatt ggctaaattt
      241 gactgataac ccaacccccg caagtgcaat tgtaatgaaa aacagtgccg cttgtttgaa
      301 aatcgcaatg ataccatcag aaaaattaaa aatggtacta accagtgatg caacaataaa
      361 ccaaataata aagttcggaa tcatcgccca tatattttga cgttggccac tgtcatttgt
      421 tgcttgttga cgtttagcca cccaaaacgc cagaccaatc gtgataggaa taataaaaag
      481 tgtacgtgtt aatttaacaa tggtcgcgac ttcaagtgcc tttgaaccat ataacgcact
      541 tgctgctacg acactagatg tatcgttaat tgctgtccca ctgaaaaaac caaatgcttc
      601 ttgactcata tgaaaaaagt ggcctatcgg agggaaaata atgaccgcaa ttaagttaaa
      661 taaaaacact gtagaaaggc taaaagcgat aatattgtct ttagctttaa tgactgggct
      721 tgttgcggca atagcagagc ccccacaaat agaggtaccg acgccgatta aaattcctgt
      781 atctaaatca atatgaaata acttgactaa caatgtgacc acaacaaagg caacgagtag
      841 cgtcacaatg agtatcggta atgacttgag gcctactgtt ccgattgatt gaaaactcaa
      901 tgtaaaaccg agcaaaatga tgctgtaatg caatactttt ttactgctat attgaatacc
      961 gggtttgaat gattcaggta gttttaacgt attattcaaa accataccga tgaccattgc
     1021 aaaaatcgca ctacctacaa ttggaaaaaa gtgaccaaag agggtagcga taattgcaat
     1081 agtgagcgtt aggcataatc cttttacttt tgacatagtc atcgatcctt tcgtgaaatg
     1141 acatcgcaac atgtgaacat gacgtatatt tttgcgctaa gtttaacaaa gtggcaatcg
     1201 tacaagccat cctcgtttgt tctcaagtat aggcgtatca gaatcgtttt tcaatagtca
     1261 ttgacagtta taggtcaata atgttgactt tattatcgcg ggcgtataaa atgtaaattg
     1321 taatcaataa agagaaaaag gacgggatga tgatgaaaaa acgtattgga caatttttga
     1381 tagatgaaat cgcaaaacaa ggcgttgata aaatttttgg tgttcctggt gatttcaatt
     1441 taactttttt agatgatatt gaagcacatg agacattaga atgggttggt aatacgaatg
     1501 aattgaatgc aagttatgct gcagacggtt atgcacgttt gaacggactt gcagctatgg
     1561 taacaacttt tggtgtcggt gaattaagtg cagtcaacgg cattgcgggt tcatacgcag
     1621 aaaatgtacc cgtgatacaa attacaggcg caccgacgac agtagttgaa caagccggca
     1681 aatatgtgca ccattcttta ggtaacggca aatttgatga ctatcaaaaa atgtatgcac
     1741 aaattactga aacacaaaca gtattaactg tagacaatgc attaacagaa atcccgcgta
     1801 tcattaaagt agcaacagaa gaaaaacgtc cggtacatgt ccacttacca attgacatcg
     1861 cagcaaaaga aatcgaagta ccagatgacg tcgcatatcc tgcaactcaa aaagcagaaa
     1921 acgtttcaac tgtagtagaa aaattaacag aacgattaaa agccgcacaa caagtgacgt
     1981 taattgtcgg acatcaaatc aatagttacg gtttgcaaaa agatgttcaa gcaattgcag
     2041 aaaaattaaa cttacctgta gcacaattgt cactcggtaa aggctcattt aatgaagaaa
     2101 gtgcgcaata tatgggggta tacgacggtt atatcgcaga agacaatatc cgtgattatg
     2161 tcgatggtag cgatttggtc attactttag gcgctaaatt gacagactca gcaacagcag
     2221 gattctcaca aaaattctca aatgatacga ttgtaacttt gaatcatcgc gacgttaaag
     2281 taggcgacta tacaacaact gaaccgtcat tacctgaaat tgtagaagcg ttcaaaaata
     2341 ttgatttcaa atatggaggc gactttccac aatatcaatg gccagatgta tccgcagcag
     2401 tatataacga tgaaccatta acacaagaaa actatttcaa cttaatgcaa aactttttac
     2461 gtaaaggtga cgttatatta ggcgagcaag gaacatcatt ctttggtgca taccgcttag
     2521 cacttcaaga aggcacgaca tttatcggcc aacctttatg gggctcaatt ggttatacgc
     2581 tcccatcaac attaggtaca ttacttgcag caccagaacg tcgtcatgta ttactcattg
     2641 gtgacggctc attacaatta acggcacaag aaatgtctac aatggtacgt caaaacttaa
     2701 atccagtcat ctttattatt aacaatgacg gttatacagt tgagaaaaag attcatggtg
     2761 aaaatgccaa atacaatgac attcaaatgt gggactataa attattacca gcattatttg
     2821 gcaacaaaga catcccaaca tatgacgtca aaacatccaa tgacttaaaa gtagcaatgg
     2881 atcaaatcga tcaaaaccct gatacgatgc atgttgttga agttcacatg gatgtattag
     2941 atgcaccagc gaacctaaac gaaatttcta aagccttcgc tgcacaaaac aaataatctg
     3001 ttgtagaggg caaaatttta tggttgacat gaaattgaaa tgcatgtata gtgttggata
     3061 acttcataaa acgtatggtt gataagtagt ttttacgaat gtagcacgca gaaagctaac
     3121 ggttgatgca agttagcaca aacgtagaga tgaattgggc aatcgcaata tacgaccaat
     3181 tgaattgtaa tcaaaagagc gaacatggta tagaaattca tgttaactaa ggtggcacca
     3241 cggtaacgcg tccttacaga agagacgtct actgtggtgt tttttagttt ttgtcggcta
     3301 tctaaaagta tctcaaagcc attaatgacg tccgtttcgt tgaggtgagg cgcctcgtaa
     3361 agtgagtcaa agtgaagcaa taacttagat tgtgtggagg tgggtttggg acatagaaaa
     3421 tttcaagcct caatccattc ataggttgat ggttcattaa tgactttaga acagtcggaa
     3481 agtgatggag aatgggatag aaaaaattga tgctattggc tttcttgatt tcataaactt
     3541 gccctcagtt tcgctgtatt tcatataaga ttgtccagag ggctgagact cctgagggat
     3601 cagctggtcc ggaaaatcca attcggcatc catctagtgt acacttcaat caagccgaat
     3661 ttagttgaag ggccagcccc taggaaagcg aagccactat ggcaatcaaa agcaaaattc
     3721 gtagggagag ggcaagttca acaaaaatac ttcatcaata gcatgaaaaa ttttaatgtc
     3781 ccatctccaa aaattaaaga aatgccttat aaacggaaca aagtgagtcg tgttcctttc
     3841 aaccgaaaca aacaattgtg aggtaagaaa aagtagtttg aacaatcggt agttccagaa
     3901 aatagacggc tgatgcgagt ctataccgac ctcaagtgaa ttggttctta cttgaagcaa
     3961 ccaactgaat cataacttaa agcgaacagt gacaatactg ttaacaaagg tggtaccgcg
     4021 cgtgagcgtc ctttcggagg acaatcatgc gcttttttta gtgccgaaaa ttgaaggagg
     4081 agccctatga acattgccta tcgcgtttta gatgcaccga tcaatccaga aacattagca
     4141 cgacatcgtc aacataaaat tgtattagaa agtgccacaa catcgcaaac aaaggggcga
     4201 tattctgttg tcgcttttga tgcttatggg gaagtcattt taacagaatc acaattaaat
     4261 attttggccc cgcatcaaac gattcaagaa acgactgcac cgtttgaaca attgaaagct
     4321 tttgtagggc aatatcacgc acagatttct gaaccagagc ttgaggtatt acctttcatt
     4381 tcaggctttg tcggttattg tagttttgat ttagtccgac acgcgtttcc agtgctacaa
     4441 caatatccgg cagcaggtac aacgcatgat gttcattttt atatgattga atcggtatat
     4501 gtatttgacc attataaaga acaaatttac gtgattgcga caaacctctt ttctaaagcg
     4561 acggaacatg aattatatga gcgtctagat gagatgattg cggaattcaa tcaaattgag
     4621 ttgtttgaaa cgacgcaagt acctgattta cctgaaaaag tgattgagcc gaatattgat
     4681 gaggcaacgt ttattgcaca agtacagcaa tttaaaggac gtattcaaca aggtgatatg
     4741 ttccaagtcg tcccatcacg catttatcgt tatgcacatc attttggtga acaattgcat
     4801 ccattgacgt atcagttata tcaaaaattg aaaaggaaca atccaagccc ttatatgttt
     4861 tattttaata tgggtggtcc tattttagtg gggagttctc ctgaaagttt tgtgaaagtc
     4921 aaggcaggca aagtgatgac gaatcctatt gcaggaacca ttaaacgcgg caccactgat
     4981 gaggaagatc aacaattggc agaaaccttg ttaagtgatg aaaaagagtt gagtgaacat
     5041 cggatgctcg ttgacttagg acgtaacgat attttacgta ttgctcaacc aggaagtttg
     5101 gaattgacga aattgatgac gatagaacgt tacgaacatg ttatgcatat tgtcagtgaa
     5161 gttattggtg atgtggaccc aacactttct cctattgatg tcattgcgag tttattaccg
     5221 actggaacgg tatcaggtgc gccgaaatta cgtgcgattc aacgtattta tgaaacgcaa
     5281 cctttaaaac gtggtgttta tagtggtggc gtcggttata ttaattgcga ccatacgtta
     5341 gatttagcac tcgcgattcg tacgatggtc attgatgaga cctatgtgca tgctgaagca
     5401 gggtgtggtg ttgtctatga ttcgattcca gagaaagaat tggcagaaac acaattgaaa
     5461 gctaaaagtt tattggaggt tacgctatga ttttagtcat tgataattat gattcgttta
     5521 cgtataacct cgtcgatatg tttcgcttaa aggaagacgt tgtggtgaag tatccggatg
     5581 acgacacatt gtatgacctt caaccagatg cacttgttat ttcgccaggt ccaggacatc
     5641 ccgatgatac gacgcgactc catgagatta tcgagcattt taaaggtata ccgattttag
     5701 gaatttgtct cggtgcacaa gcattgtatc ggtattatgg aggccgagtc gtcgtcgcgt
     5761 cgaaggtcat gcatggcaaa attgatacgt tacaatttga aaagccgaca ctgttatata
     5821 aagggatttc agaacattct gatattatgc gctatcactc gctcatttgt gaagaacagt
     5881 cgttacctaa aggaatccat attaccggta gaacaagtga cagtattcaa tcgtttgaac
     5941 atcgagtccg accgcattat ggcattcaat atcatccgga atcattcgca agtatcgcgg
     6001 tatcgggcat tgtagaaaac tttttaacaa tcgtaaagaa aggtgtgttg ccacatgacg
     6061 ttactgaata aaatgatgaa ctttgaagca ctcaatcatg aagaaatggg cgcgtttata
     6121 gcgacgttat tatctgaaac gacgccatta gaagataaag tcgcattact tgtcgcttat
     6181 acgatgaaag gtgaaacatc agacgaattg tatgcgttat gtgaaagctt gattcatacg
     6241 atgtaccctg aacaaccgca atatctaggc agtatgtgtg tctgcgggac aggtggcgat
     6301 ggctcgaata gtttcaatat ctccacaacc gtatcatttg tggcggcaag tggtggtatt
     6361 gaagttgtta aacatggtaa taaaagcgtc acatcacagt cagggggcat ggatatttta
     6421 caagcgatgg gcatagcgac gacccctgta caatctgtgg tgcaacagtt aaaagataca
     6481 catttggctt ttgttagtgc gacagaatct taccctgtga tgaaaaatat gcagccggtc
     6541 cgcgtgaaag tgggacgtcc aacgattcta aaccttgtcg gcccgatcat taatccgttt
     6601 gcgttagatt atcagtcaat gggagtgttt gatccgacga gaatgataaa aattgctgaa
     6661 gtgttacagc gattaggccg taaaagagct attgtcattc atggggcgaa tggcatggat
     6721 gaagcgacgt tatcaggtga caatcaaatc gttgaaatgg accaaacgat agggattcgt
     6781 gaatatacag tcaatgcggc agattatgga ttgcgttatg caccagatga agcgcttcga
     6841 ggtgggacgc cagaagaaaa taaggaaata acactaaaca ttttaaatgg aacggatcaa
     6901 tctgtaagga gagacgtcgt gttacttaat gcaggacttg cgttttacac agcggaaatt
     6961 gtcgacacga ttgaagcagg gatcgcccat gcagtgtcat gtattgattc aggcgctgca
     7021 ttcaaacaat atgaacaagc aggaggtgta gtcgtatgac gattttagat gacattgtcg
     7081 aatataaaaa gcagttactc gctgaaggtt actatgaaac gttattgaac aatttagaag
     7141 aagtagctgt gtcacacaaa cggactgtag cggaacaatt tgaaaatgac cgtacaatcg
     7201 gcgtgatcgc ggaaattaag tcaaaaagcc cgaccgtttt agatataccg gaccgtaatt
     7261 tagaggaaca attgcgattg tatacagcag gaggcgcatc agcgatatcg attttaacgg
     7321 atgaacaata ttttgggggc agttatgaac ggatggcagc cttgacaaaa cagacggatg
     7381 tgccggtact ctgtaaagac tttatgattg atgagcgaca aatcgatgtg gcgaaaaaag
     7441 caggggcgtc tatgatttta ctcatcgtca acattttaac agatgaagca ttggcgcgat
     7501 tacatgatta tgcgacagct ctcggattag aagtgcttgt ggaagtccat gaccgacaag
     7561 aactggcacg agcacatcgt attcgaccgc aatttgttgg tgtaaacaac cgtgatttga
     7621 gaagttttaa gactgatgtc agtcataccg gacaaatttt aacttcacga cacccgggta
     7681 tacattacat ttcagaaagt ggcattaaga cggtgtcgga tatcgaaacg cttgtaccaa
     7741 ctaggattgc aggcgtactg atcggtgaaa cattgatgaa agcgaatgat ccacaagcag
     7801 aactccaaag ctttaaattg cgtaaagagg tgtaacatgt atttgaaatt ttgcggattt
     7861 acacaagaag aagacatccg agaagcagtc cagcacgata tacaagcagt cggatttatc
     7921 acgtatccca aaagtgcacg ctacgttgat ttagcgcaac tgcaaaaact aactgcgcac
     7981 gttcctaaaa cgatggatcg cgtggcagtg actgtgaaca caacgatggc acaactagaa
     8041 gccatcatcg aacaaactgc tattaatacg atacagtttc atggtaccga atcaatagac
     8101 atgattgcta cagtgaaggc gcgctatcct gacatacaat tgtttaaagc gattcctgcc
     8161 gatgaaaaat tgtcggacaa catcgagcgt tatggaaatg ttgttgatcg actgttaatt
     8221 gatacaccgt ctagcgcttt tggaggcaca ggacaagtat ttgattggcg tgtgttggat
     8281 acgttgtcga cgtcgaattg tttggtggca ggtggcgtca acagtgagaa tgtacggcag
     8341 ttaatccaac gtcacccgaa tatcgcgggt attgacattg caagtggcat tgaaaaggca
     8401 aaaggccaaa aagatcatga caaaatggca tatattgtaa aagttttgaa aggagaatga
     8461 caatgaaaaa cattcaatta gaagcagatg aacatggatt tttcggagag tacgggggca
     8521 aatacgtacc cgaaacgctc atgccagcta tcgaagaatt gaaaaaggct tatgatgcgg
     8581 cgaaacaaga tcctgaattt caacgtgact atcatcatta tttaaaacat tacgttggac
     8641 gcgaaacgcc gcttacgtat gccgattctt acacgaaagc attaggtggc gcgaaaattt
     8701 atttgaaacg tgaagatttg aatcatacgg gggcacataa aattaataac gcgattggtc
     8761 aagctttact cgcgaaacgc atgggtaaga agaagcttgt cgctgaaact ggcgcaggtc
     8821 aacatggtgt cgcaagtgca acaattgcag cgttattcga tatggaactc gttgtattta
     8881 tgggggaaga agatatccgt cgtcaacaac tcaatgtctt tcggatggag ttactcgggg
     8941 cggaagtcgt acctgtgact gacggacaag ggacgttatc agatgcggtg aataaagcac
     9001 ttcaatattg ggtcgcacat gtcgatgata cacattactt acttggttca gcgctcggac
     9061 cggacccatt tccgacgatg gtgcgcgatt ttcaacgtgt cattggtgat gaaatcaaag
     9121 cacaacttca agaaaaagaa gggcgtttac cgaatgccgt cgtcgcgtgt gtcggtggtg
     9181 gttccaatgc aatcggtacg ttctatccat ttattgaaga tgcatcagtg aagttgtatg
     9241 gcgtggaagc agcaggggaa ggtatcgatt cagaacgaca tgctttagca attaataaag
     9301 gaaaaaaagg tgtactccat ggaacgaaaa tgtatttaat tcaagatgac aaccatcaaa
     9361 ttaaattggc acattctatt tcagcaggcc tcgattatcc gggtgtgggc cctgagcata
     9421 gttattacca tgacataggg cgcgtcgatt atgtcactgc tgacgataaa gaagcgatgg
     9481 aagcactcgt acgtttcaca aaagcagaag ggattattcc agcaattgaa agtgctcatg
     9541 ctttaagtta tgttgaaaag ctcgcaccac aattggataa agatgacatt ctcgtcgtaa
     9601 cagtgtcagg tcgtggtgat aaagatatgg aaacgattaa acattatatg gaagaaaagg
     9661 aggcgtaacg atgcatgcga aacaatttgt agcgtacatt atgggtggtc cagagtttat
     9721 agcacaattg aaagcattag atgaagttgg cgcggattat gttgaaattg gtaccccatt
     9781 ttctgatcct gtcgcggatg gtcccatcat tatggaagca ggacaggcgg cgattcgagc
     9841 agggatgacg gcccagaaaa tttttgatca gctgaaaaca gtgaacggtc agctcaacac
     9901 acgttattta ctgatgacgt attatcatac gattgaaact tatggagaag cggcatttat
     9961 ggctgaagca gaagcggccg gtgtagaagg gctcatcatt ccggatatgc cgtttgaata
    10021 tatcgaacaa ttgaaagccc gttatccaga gcaacagttg aaattcatct cactaatcgc
    10081 gatgactgct gcacctgaac gacgtcaacg catcgctcaa tccgctgaag gatttattta
    10141 tacgatcaca atgaatcaaa ttacaggtca aaacggcaat ttccaccctg aattgaagca
    10201 aaatatttta gatattaaac aacatagtga tgtgccggtg atggccggat ttggtattcg
    10261 tacacctgaa catgttcaag aaatcatcga agtggctgat ggtgtcatta tcggaagtga
    10321 aatcgttcgc cgttttaatg aagaaggcat tgaagcaacg aaacaatatt tagcgagggt
    10381 tcgtgaagca cttggtaagc atcgttcaac tgcacagtaa tttgtcatat cagtgtgaag
    10441 ttcaaacgct attcattcag gcacccccgt tatataataa gtgtcagtat aaaaatgata
    10501 cttgtagggg taagttttaa aataaagagg tgctgaacaa tgaataaagt gatgattttt
    10561 gatttagacg atacgttata tgatcaactt tcaggttttg aatatgctta ttaccgtcat
    10621 tttggtgata ctgatatcgg tgtaggaagg ctttatcgtc attttcgttt atatagtgaa
    10681 gaattattcg aagcgacaca aacaggcgca ttgtcggtgc cggacatgca tgttgtacgc
    10741 atcacacgtg cagtggcgga ctttgatatc gagttgcctg aagagaaagc acgtgccttt
    10801 caacgtgatt acgaacatgc gcaacaacat atcaaattgt caactacgat tgttgaaatg
    10861 ttgcagtatt tagttcaaaa aaacgtcaaa ttaggtttac tgacaaatgg ggagtcagac
    10921 cgtcagcgtg ccaaaataaa agctttagga ctcgatcaat atattccaaa atccaatatg
    10981 tttgtctcag cggaactggg cttatcgaaa ccagatccag ccatatttga aacagtgggc
    11041 aaacagatgg atgtcggtgc gagtgacgca tactttatcg gtgatcattt tgacaacgac
    11101 attttaggtg caatgcaagt cggttggaag gctatctggt acaatcgccg caatcgcccg
    11161 caaactgata tgactaaaca gccgacaaaa acagtgatga cggaaaaagc attgtttgaa
    11221 gcgattcaaa atatcataga aagtgcataa tatgaaagca tgtggaagga ttaacgtttc
    11281 tttcacatgc atttttaaat ttgtaattaa taagtcaatc ttaagtaggc taatatgaaa
    11341 tctagcgagt caatattcat tgccaagtgt ggtgtactaa caaggtaaaa gtagttgtaa
    11401 gcacac
//
LOCUS       DANHPA010000082        10894 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.082, whole genome shotgun sequence.
ACCESSION   DANHPA010000082 DANHPA010000000
VERSION     DANHPA010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 10894)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10894)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10894
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.082"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..89)
                     /locus_tag="PTC28_001774"
     CDS             complement(<1..89)
                     /locus_tag="PTC28_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HDK5717054.1"
                     /translation="MTQKYISTELLIIFTALMIIANLYYIFFE"
     gene            complement(102..491)
                     /locus_tag="PTC28_001775"
     CDS             complement(102..491)
                     /locus_tag="PTC28_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717055.1"
                     /translation="MLQLLKSYFEKFFREVYQQLFHQYLNRLDIKIQNIDCAMAYIER
                     KKCQMRMMIDRRTIELENKYIDLMNEYHLSSAKVIEGGDINSIKSDLNEIEKEYAQLE
                     NYFLKLREDKGLMKKECDFVQSLMYAY"
     gene            complement(589..1350)
                     /gene="map"
                     /locus_tag="PTC28_001776"
     CDS             complement(589..1350)
                     /gene="map"
                     /locus_tag="PTC28_001776"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HDK5717056.1"
                     /translation="MIVKTDEELQALKEIGAICAEVRDTMREATKPGVTTKELDQIAK
                     DMFEQAGAISAPIHDENFPGQTCISVNEEVAHGIPSQRVIREGDLVNIDVSALKNGYY
                     ADTGVSFVVGETSEPMKQKVCDVAEEAFEAAMKKIKPGSKISQIGKAVHAVARKNDLT
                     VIKNLTGHGVGQSLHEAPAHILNYFDPHEKLLLKEGMVLAVEPFISSNATYVTEGKNE
                     WAFETKDKSYVAQIEHTVIVTKDGPVLTTKIDRDE"
     gene            1447..2445
                     /locus_tag="PTC28_001777"
     CDS             1447..2445
                     /locus_tag="PTC28_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HDK5717057.1"
                     /translation="MKDKWYKNLVGARTLKTGLATFLTALFCLSLDLNPIFAILSAVV
                     TIEPTVKASIRKGYKRLPATVIGAFIAVVCTYFLGDDSALTYGLTATLTILLCIRLNL
                     HVGITVATLTALAMIPDIHEDYYFNFFSRLLTAFIGLGTAGLVNFIIMPPKYYDQIDV
                     LIEKSEREIYHLFDTRMKELVIGLFHSKKSDQAVQKLHVLNARIEELLGYQKDELNYH
                     KSRSQSDEWLRLRRLTNRAHENRLMITHLSNIIYLPNDTMMIFTDEEKIAMISISQRM
                     DQIFNCGTFKPEKKAASTLKNSVKGLNEFDDNQVKSHTIYEILLIYRILLLRYKVK"
     gene            complement(3415..4137)
                     /locus_tag="PTC28_001778"
     CDS             complement(3415..4137)
                     /locus_tag="PTC28_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine amidotransferase"
                     /protein_id="HDK5717058.1"
                     /translation="MHELTVYHFMPDKLNLYSDIGNIMALKYRAKKRGIHLNVVDVND
                     TENVDLSKADIFFIGGGSDREQSLATESLRKIKTELKAAIEDGLPGLTVCGGYQFLGE
                     KYITPDGQELEGLHILDFYTESKKERLTGDIVIESDTFGTIVGFENHGGRTYHDYDTL
                     GTVTHGYGNNDTDFKEGIHYKNLLGTYLHGPILPKNHEMTDYLLKAAAERKGIPFEPL
                     HIDNAEEEQAKQVLVDRARKRK"
     gene            complement(4139..5449)
                     /locus_tag="PTC28_001779"
     CDS             complement(4139..5449)
                     /locus_tag="PTC28_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HDK5717059.1"
                     /translation="MRQWTAINMAKLARKASRATGRKGTDLPGQVARKIDQNILRKLA
                     GRVDEVVFVSGTNGKTTTSNLIGHTLKANHIEIIHNNEGANMAAGITSAFIVQLTPQT
                     KIAIIEIDEGSIPRVLNEMTPTKMVFTNFFRDQMDRFGEIDIMVNGIISAIENKGIQL
                     LLNADDPFVTRLKIASDHVTYYGMQAHAYEFEQSTMNESRYCPNCGSLLNYSHIHYNQ
                     LGHYTCHCGFKRETPQYEIASFTVDPFIEMTVNDTTFNMKIAGDFNAYNALAAYTVLR
                     ELGLSDTSIRKGFETYTSDNGRMQYFEKGQKKALINLAKNPAGMNASIAMGEKLDESK
                     VYVLSLNDFAADGRDTSWIYDADFEKLNEQTIEAIIVTGSRAEELQLRLKLAEVTAPI
                     ILEKDIYKATALTMDYNSFTVAIPNYTSLAPMLEQLNRSFKEVD"
     gene            5646..6149
                     /locus_tag="PTC28_001780"
     CDS             5646..6149
                     /locus_tag="PTC28_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin"
                     /protein_id="HDK5717060.1"
                     /translation="MLNEKLLNALNRQMNHEFFAAHAYMAMASYCDYHSYEGFANFYI
                     QQAKEERFHGQKIYDYINDRGEQAVFSQLDAPKVEFNSILETFEDGLKQEQDVTHRFY
                     DLSEIAHEYKDYATISFLNWFLDEQVEEESMFETHIDYLKRIGDDSNALYLYEKELAA
                     RKFEVEV"
     gene            6438..6998
                     /locus_tag="PTC28_001781"
     CDS             6438..6998
                     /locus_tag="PTC28_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HDK5717061.1"
                     /translation="MMENSFVALDFETANYKRTSICSVGMVKVVANEIVETFYTLVNP
                     NDFFAARNIVVHGIQAKDVQHSPNFAYVYPYMMQFIGDLPVVAHNAAFDMSVLHASIQ
                     AENLITPPMTYFCSYQLAKRTVSARRHGLKHMMSHFNLDFHGHHDALNDAKACAMITY
                     RLLKHYPSLNNVLQVYGKQLTDKDML"
     gene            complement(6993..8063)
                     /gene="dinB"
                     /locus_tag="PTC28_001782"
     CDS             complement(6993..8063)
                     /gene="dinB"
                     /locus_tag="PTC28_001782"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011302771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HDK5717062.1"
                     /translation="MKERRIIHIDMDFFFAQVEVRDHPSLRGKPVIVGGKASGRGVVS
                     TASYEARAFGVHSAMPMARAYQLCPNGYYVTPRFEAYREVSQQIMEIFKSYTELVEPL
                     SLDEAYLDITELVRPDLPASKIAEYIRRDIYNQTQLTASAGVSYNKFLAKLASGMNKP
                     NGLTVIDYQNVHDILMQLDIGDFPGIGKASKEKMHAKGIYNGQDLYEKSERELVYLFG
                     KRGHQLYQRVRGYDDREVKAERIRKTVGAERTFSLDTNDDEEILQKIEMLSEKIAQRL
                     EKMNQAGRTVTVKIKTHRFENFSKQQSLITPVQDADEIYRIAYDLYYELKEAEVPIRL
                     VGVTAGGLQDAFFRNMTIYDFL"
     gene            complement(8168..8710)
                     /locus_tag="PTC28_001783"
     CDS             complement(8168..8710)
                     /locus_tag="PTC28_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3267 domain-containing protein"
                     /protein_id="HDK5717063.1"
                     /translation="MYKIDLFQNQQIMKRFLLLQFIVILAFIVLSYKWSMAAISLQEQ
                     HFSTNLFIGIIGFLVTVLCHEGIKTILLKMMSVKTRRYQVKNGVLLTFLPQYYFNRMT
                     FSTVMLMPVALVGMLLFIVFINMPYTSIIFTFAIYMGYSLLSFYLVFLALRDKKAQYI
                     EMTEAGLLVSRKKPAERTAH"
     gene            complement(9100..10277)
                     /locus_tag="PTC28_001784"
                     /pseudo
     CDS             complement(9100..10277)
                     /locus_tag="PTC28_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613470.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(10270..10894)
                     /locus_tag="PTC28_001785"
                     /pseudo
     CDS             complement(10270..10894)
                     /locus_tag="PTC28_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613469.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SPASM domain-containing protein"
BASE COUNT         3404 a         2200 c         1762 g         3528 t
ORIGIN      
        1 ttctcaaaaa agatatagta aaggttcgca ataatcatta gcgcagtaaa aataatgagt
       61 aattcggtcg aaatatattt ttgtgtcata tttccacctt tctagtatgc atacattaaa
      121 gattgaacaa aatcacattc ctttttcatc aaacctttat cttctcttaa cttgaggaag
      181 taattttcca attgcgcata ctctttttca atttcattca aatcactttt aatcgaattg
      241 atgtctccac cctcaatcac tttcgcactt gagagatgat attcattcat taagtcgata
      301 tatttatttt ctaattcaat cgttcttctg tcaatcatca tccgcatttg gcattttttg
      361 cgttcgatat aagccattgc acagtcaata ttttgaattt taatatctaa tcgattcaaa
      421 tattgatgaa acagttgttg ataaacctca cgaaaaaact tttcaaaata actttttaat
      481 agttgtaaca ttttagaatc acctctaacg ttacccctat tataaaatgg ttctataacc
      541 ttgataatag gctacagaac catttccctt taagacttaa gtccgaatct attcatcacg
      601 gtcgattttc gttgtgagta caggaccgtc ttttgtcaca atgacagtat gttcgatttg
      661 agcgacataa cttttatctt tcgtttcaaa tgcccactca tttttacctt cagtgacata
      721 tgtcgcatta gaagaaataa acggctcaac agcaaggacc atcccttctt ttaacaacaa
      781 cttttcatgc ggatcgaaat aatttaaaat gtgcgcaggt gcttcgtgta aagattgacc
      841 gacaccgtga cctgttaagt ttttaatgac agtcaaatcg tttttacgcg ccacagcatg
      901 caccgcctta ccaatttgac tgattttaga acctggctta atttttttca ttgcagcttc
      961 aaaagcttct tctgcaacgt cacatacttt ttgcttcatc ggctcactcg tttcacctac
     1021 aacgaacgaa acgcccgtat ccgcgtaata accatttttc aatgctgaga cgtcaatatt
     1081 caccaagtca ccttcacgaa tgacacgctg acttggaatc ccgtgagcga cttcttcatt
     1141 aacactaata caagtctgtc cagggaaatt ttcatcatga atcggcgcag aaattgcacc
     1201 cgcttgttca aacatatctt tagcgatttg atcaagttct ttcgttgtca cgcctggctt
     1261 agtcgcttca cgcattgtat cacgaacctc agcacaaatc gcacctattt cttttaatgc
     1321 ctgtaattct tcgtctgttt ttactatcat tgttatcccg ttccttctaa aagtttatac
     1381 agtccttatt ataacaaaaa atttttgata tactaataat gaactacgaa acaggagata
     1441 cgaactatga aggataaatg gtataaaaat ttagtcggtg cacggacgct taaaacaggg
     1501 ttagctactt ttcttactgc gcttttttgt ttgtcactcg atctcaaccc tatttttgca
     1561 attttatcag ccgtcgtaac gattgaaccc actgtcaaag cttccattcg aaaaggttac
     1621 aaacgacttc cagccacagt cattggtgca tttattgctg tcgtctgcac ttacttttta
     1681 ggtgatgact cggcactcac ttatggtttg actgcaactt taaccatctt actttgtatt
     1741 cgcttgaact tacatgtcgg gattacagtt gcgacactta ccgcattagc aatgattcca
     1801 gatatacacg aagattatta tttcaacttt ttttcacgct tattaacagc cttcatagga
     1861 ttaggtacag caggactggt gaacttcatc ataatgccac cgaaatatta cgaccaaatc
     1921 gatgtcctta ttgaaaaatc agaacgtgaa atttaccatt tatttgatac gcggatgaaa
     1981 gaactggtca tcggcttatt tcactctaaa aaaagtgatc aagcggtaca aaaattgcat
     2041 gtattgaacg cacggattga agaattactc ggataccaaa aagatgaatt gaattatcat
     2101 aaaagtcgca gtcaatccga tgaatggttg cgtttaagac ggttgacaaa tcgcgcgcat
     2161 gaaaatcgac tgatgattac acatttgtcg aatattattt atttaccaaa tgatacaatg
     2221 atgattttta cggacgaaga aaaaattgcg atgatttcga tatcacagcg gatggatcaa
     2281 atttttaatt gtggcacgtt taagccggag aaaaaagctg catcgacatt gaagaactca
     2341 gtgaaaggtt tgaatgagtt tgacgataac caagttaaaa gtcataccat ttatgagatt
     2401 ttgttaattt atcgtatttt attgttgcgt tataaagtga aatagagtgt ataaaagtga
     2461 gtgcgaacca ttcatacact tcttatataa tgaaccggga atgggacata aaattttgat
     2521 gccattgatg cattttcatc taattgcctc atttatcacc tttttaaatt ctcacaattg
     2581 cccttaatgg actcgcgttc ctaggggact tgcctcaact agccaacgct ttattgagct
     2641 gttaaatatg aatgaagcgt tggcggattt tcggctacgt ctgatccctc aggagtctcg
     2701 tccattttag caatttgaat ttaaatgctg tgaatcaatg aaacgagctg ataagatgaa
     2761 acaatcaaaa atttttatcc ccattcacct taattaattt tatatttcta tattttgctt
     2821 ttcgttcatc gtaggagagg ggctcggaaa ctcaatgtcc tacccctgtt ctttcaattt
     2881 ttaaacactt tattttcaat gagactaaca gcaatgggtc atttaaaaat ctctttacgt
     2941 ttgttcgctc cggtgaaatg agtgaataac aattttggtt tatatgaaaa tctgacctct
     3001 tttgcgttcc ttcccgaaaa ctttaaaaca agttctattc tctactttag cgtaaaaaaa
     3061 tggagcaagg cactgctatc gctcactcca ttttgaaata tgtattttat ataatggaca
     3121 ctaccgcaac acactgctgt ctcaaaaagc ttctaagtgc acactcaaag ttataagaaa
     3181 aaaaacacaa ttcttgatgt attgaatcgc tttattcaca taaacctgcc tgcttctttt
     3241 aacaattaac gtaaaattgc cccaatggac gagactcttg agacttcagc ccctaagaac
     3301 gcgagtccat taagggcaat tacagttaat atgaatgttt aaatttagat aaaggcaggt
     3361 ttatagaata acctcattaa aaatacatca aaaattgtgt ccgagccgct agattcattt
     3421 tctcttacgc gcacgatcca ctaatacttg tttggcttgt tcttcttccg cattatcaat
     3481 atggagtggt tcgaacggaa tgccttttcg ttctgcagcg gctttcaata aatagtccgt
     3541 catctcatgg tttttcggta aaatcggccc atgtaaatac gtccctaaca agtttttata
     3601 atgaatccct tctttaaagt cggtatcatt attaccgtaa ccgtgcgtca cagtgcctaa
     3661 tgtatcataa tcatggtacg tgcgaccgcc atgattttca aaaccgacga tagtgccaaa
     3721 cgtatcactt tcgatcacga tatcacctgt tagacgctct ttttttgatt ctgtataaaa
     3781 gtctaaaatg tgtaagcctt cgagttcttg cccatccggt gtaatatact tttcacccaa
     3841 aaactggtat cccccacaaa ctgtgagacc cggtaagcca tcttctattg ctgctttcaa
     3901 ttccgtttta attttgcgta gtgattccgt agccaaactt tgttcacggt cacttccacc
     3961 accgatgaag aaaatatccg ctttagaaag gtcgacattc tcagtatcat ttacatcaac
     4021 aacgttaaga tgaataccac gctttttggc acgatatttc aacgccataa tgttgccaat
     4081 atcactatat aaattgagtt tgtctggcat aaaatgatag acagtgagtt catgcatatt
     4141 aatcgacctc cttaaatgaa cgattcagtt gttcgagcat tggtgctaat gatgtgtagt
     4201 tcggtatcgc aactgtaaaa ctgttgtagt ccatcgtcag cgccgttgct ttataaatgt
     4261 ctttttctaa aataatcggt gctgtcactt ccgcaagttt taatcgcaat tgcaattctt
     4321 ccgctcgtga acctgttaca atgattgctt ctatcgtttg ttcatttaac ttttcaaagt
     4381 cagcatcata aatccatgac gtatcccgac catcagctgc aaagtcgttc aggctcaaga
     4441 catacacttt tgattcatct aacttttcac ccatagcaat cgatgcgttc atgccagccg
     4501 ggtttttcgc caagttaatc agtgcctttt tctgtccttt ttcgaaatac tgcatacgac
     4561 cattatctga agtatacgtt tcaaaacctt tacgaatcga tgtatcactt aaacctaatt
     4621 ctcttaatac tgtatatgct gcaagtgcat tgtatgcgtt aaagtcacct gcaattttca
     4681 tattaaaggt cgtgtcattg accgtcattt caataaaggg gtccacagta aatgaagcaa
     4741 tctcatattg cggtgtctct cgcttaaagc cacaatgaca tgtgtaatga ccgagttggt
     4801 tataatgaat gtgggaataa ttcagcagtg acccacagtt cggacaataa cgactctcat
     4861 tcatcgtgga ctgttcaaat tcgtacgcat gggcttgcat cccataatat gtgacatgat
     4921 cacttgcgat tttcaaacgt gtcacaaatg gatcgtcagc atttaataat aactgaatgc
     4981 ctttattttc aatggctgaa ataatgccat ttaccataat atcgatttcg ccaaaccggt
     5041 ccatttgatc tctgaaaaag tttgtaaata ccattttagt aggtgtcatt tcatttaaaa
     5101 cacgtggaat agagccttca tcaatttcaa tgatggcgat tttcgtttga ggtgtcaatt
     5161 ggacgatgaa agctgaagtg atcccagcag ccatgttcgc accttcattg ttatgaataa
     5221 tttcgatatg atttgcttta agcgtatgac cgattaaatt cgatgtcgtt gttttaccat
     5281 ttgtaccact aacaaacacg acttcatcca cacggccagc cagtttacgt aaaatatttt
     5341 gatcaatttt gcgcgcaact tggcctggta aatctgttcc tttacgccct gttgcacgac
     5401 ttgcttttct tgcgagcttt gccatattaa ttgctgtcca ttgtctcata ttcaacattc
     5461 tcctccgatt tcctacaata ttatatcatg gtgacacaaa ttaccaaata aaaagataat
     5521 cgctcaacat cgactgacga ccgatgtaca ttttgataaa aaactcttaa tacaacgttc
     5581 ttttgaatat tgttcacaat atagggtaca atgaataaat accaaagatt ttaggggtga
     5641 ttgatatgtt aaatgaaaaa ttattaaatg cattaaatcg tcaaatgaac catgaatttt
     5701 ttgcagcaca tgcttatatg gcgatggctt cttactgtga ttatcattcg tacgagggct
     5761 ttgcgaattt ttacatccaa caggcaaaag aagaacgttt ccatggtcaa aaaatttatg
     5821 attacattaa cgaccgtgga gaacaagccg ttttcagtca acttgacgca ccaaaagttg
     5881 agttcaacag cattcttgaa acatttgaag acggtttaaa acaagagcaa gatgtgacac
     5941 accgttttta tgatttatct gaaattgcac atgaatataa agattatgcg acaatttcat
     6001 ttttaaattg gtttttagat gaacaagtgg aagaagaatc aatgttcgaa acacacatcg
     6061 attatttaaa acgtattggt gatgattcaa atgcgcttta tctttatgaa aaagaattag
     6121 cggcacgtaa atttgaagtt gaagtataaa caatcattat agaccaaatt tactttccgc
     6181 ataaaaggct aggtaaacac ccttgtaacc tagcctttct ttctacagat atagaacatg
     6241 gctttctggc aaaaatcccc tactgaatgc taaactggac aaatttgtac ttaacttgtt
     6301 ctcatttctt gattggtttc aaataccgag aatgaaatct tattcatttt tccacaaacc
     6361 gcttcaacat catcttattt ttatctctcg tccaaatgtg ctaatattta gctattattt
     6421 tgaaaggaag tatggctatg atggaaaata gttttgttgc gctcgatttt gaaactgcca
     6481 attataaacg gacgagcatt tgttcagtcg gtatggtgaa agttgtcgcc aatgagattg
     6541 tagaaacttt ttatacgtta gtaaatccga atgatttttt tgcagcacgt aatattgtag
     6601 ttcacggtat tcaagcaaaa gacgtacaac attcgccaaa ttttgcgtac gtgtatccct
     6661 acatgatgca atttataggc gatcttccag tcgttgcaca taatgccgcc tttgatatgt
     6721 cagtcctgca cgccagcatc caagcagaaa acctcatcac gccaccaatg acttactttt
     6781 gttcatatca actcgcaaaa aggacggtat ctgcacgtcg ccatggctta aaacatatga
     6841 tgtctcattt caatcttgat tttcatggtc atcatgatgc tttaaatgac gcgaaagcct
     6901 gtgcaatgat tacgtatcgt ttgctgaaac actatcctag ccttaacaat gtcctccaag
     6961 tttatggcaa gcaactgact gataaagata tgttataaaa agtcataaat cgtcatgttt
     7021 ctgaaaaagg catcttgcaa accgcctgcc gtcacaccga ctaaacgaat cgggacttcc
     7081 gcttctttca attcataata taaatcatat gcaatgcgat atatttcatc ggcatcttgg
     7141 acaggcgtga ttaaactttg ttgcttggaa aaattttcaa agcgatgtgt tttaattttt
     7201 actgtgaccg tacgtcctgc ctgattcatt ttttcgagac gctgtgcaat tttctcgctt
     7261 aacatttcta ttttttgtaa aatttcttcg tcatcgttcg tatcgagtga aaatgtccgt
     7321 tccgccccta cagttttccg aattctttcc gcttttactt ctctatcatc atagccgcgt
     7381 acacgttgat ataactgatg tcctcgttta ccgaataaat agaccagttc gcgctcagat
     7441 ttttcgtata agtcttgacc attataaatc ccttttgcat gcattttttc ttttgatgct
     7501 ttgccaatac ctggaaagtc accgatatcg agttgcatta atatgtcgtg tacattttgg
     7561 taatcaatta ccgtcagacc atttggcttg ttcatcccac ttgcgagctt tgctaaaaat
     7621 ttattataag atacacctgc gctcgctgtc agttgtgttt gattataaat atcgcggcga
     7681 atatattccg caatttttga agctgggagg tctggacgaa caagttctgt aatatccaga
     7741 taggcttcat caagtgaaag cggctcgacc aattcagtat aacttttaaa tatttccata
     7801 atttgttgtg atacttcacg gtaggcttca aaccgtggtg tgacataata accattcgga
     7861 cacagttgat aagcacgcgc catgggcata gctgaatgaa caccaaaggc acgcgcttca
     7921 taggatgctg tagagacaac accgcgtcca ctcgctttac caccgacaat gactggcttg
     7981 cctcgtaaac tcggatgatc tctcacttcg acttgtgcga agaaaaagtc catatcaata
     8041 tgaatgattc gccgctcttt cacataagcc cctcctttct atctcttcat ttttatccac
     8101 tttttgattg ccctttcaaa aacaaagaac cttcacacgc cagtaaaaac gcggaagatc
     8161 catcctatca atgtgcagtt cgttcagctg gttttttgcg agaaaccaat aaccctgctt
     8221 cagtcatttc aatatattgt gcttttttat ctcttaacgc taaaaagact aagtagaacg
     8281 acaataggct ataacccata taaatcgcaa acgtaaaaat aatcgacgta tagggcatgt
     8341 taataaatac aataaacaac aacatcccaa ctaacgcaac gggcattaac atcacagtag
     8401 aaaatgtcat tcggttgaag taatattgcg gaagaaatgt taataagaca ccgtttttca
     8461 cctggtaacg acgtgtcttc acggacatca ttttgagtaa tatcgtctta atcccttcat
     8521 gacataacac tgtcactaaa aatccaatga ttccgatgaa aaggttggtt gaaaagtgtt
     8581 gctcttgtaa tgaaattgcc gccatcgacc atttgtaact taatacaatg aacgcaagaa
     8641 tgacaataaa ttgaagtaat aaaaaacgtt tcatgatctg ttgattttga aatagatcaa
     8701 ttttatacat gcattcaccc tcttatgatg tatcgttagg cttcatggtc attcttatta
     8761 taccctagct atgcaagcaa attgtaagac ttaagcccta aatttatccc atcgatcaca
     8821 atgttcattt acttccatat tcatgaggtg ttgaagacac atttcagcta atagtttagc
     8881 acttttcatc agattttgaa atatttcaat cttacagagg atatcccctt tttgcttcaa
     8941 ctccaaatat catttatata gtaggaccat tcatagatat tgatttgcat acatttgaca
     9001 tcgttttgct cattgattaa gtgcaaaaaa gacacttata tattataagt gcctcatcat
     9061 gtgattatat gggctgtaga gaaatgcata catgaaatgt cagacgattt gctttctttt
     9121 tttaaatact aacaaacacg ccaataataa acaaatgacg acaatccaaa aactgaagat
     9181 taccccaaaa acatcagtga ttgaactcat cacaaaaaca aaacttgaaa atgcgagtgc
     9241 agagatgacc tcaaatacag aaaaaacatt gaccaaatct gcttcatcca caatttcctg
     9301 taaaaaaaac gcgttctgct atttctttta actgagaaag cacacccata attaatgaga
     9361 atattaaaaa gccgaagcat tcttaaattc aataattaaa actgttacta tagccatgaa
     9421 cattaaagaa aaaaagatgc tttgccattt atattgcagt attttgtctg ataatcgaaa
     9481 aacgatgata gcgcttaaca aaataccaat agaataagtg gtatttgcat atccccaata
     9541 actttcatct ttatgcaagt attcattcac aaacactaga ataaccgatg acacccagat
     9601 cgtattcgcc aatatttcta aaagattcgc ttgtacaaaa aatcgtagtt taggctcaac
     9661 aatgattaag cgccatcccc tcgtcaatgt ttctatattt gtctcagatt ctatcacttt
     9721 tgttttgaca gctggtaaca tcaaaaatag aattgtggat atgacatata aaaataaaat
     9781 gattacagta ctcattatca aacctaaagt ggcatataat aatccaccta atccccaccc
     9841 cactagttct acaccttcac cactcattga aagcgcggca ttggtttttc ctaaatctgt
     9901 tgcatagatt ggcacgatgg caaaagctac aggtgcttca aatccatcaa gtatagaaat
     9961 tgtaacaaca aaaaagtaca aaatcgaaat atcaatcact tcgctataac acattaaccc
    10021 aagaagtaat cctagcgaaa tcgttttaca caattgtgta tatgaaagca cccgatttaa
    10081 taacattttt ttggtaacta aagggactaa aaacttgcaa taaaagaaga taaacctatc
    10141 agaataggca ccattgatgt cgcaatgact gactttgtga tggtgaatac atttgcaatg
    10201 actacaactc taagaaacac atcagctaaa ttactaactg cttgagaaat caataattgt
    10261 ttgattgcct tagtcatttc tgttcagttt ctcccttact tgtggaatta aaatggcctc
    10321 cacaaacttt tcaaattcct ttttttccat ctcatattgt ttaacaaaat caatgtcagc
    10381 agataactta cacccaccag aacaaaaacc gcctatatga caaatctgac aatctttata
    10441 atctaagaag ctttttgttt catgttggta gttcattaaa tcaatatctt ttaagtttcc
    10501 taaaatatat tgagggcgcc ctactgttac agtacatcta aacaaattaa gttcattgtc
    10561 aatatagaaa actctatcat agggagacac gttccagcag taatgatatg tgcctttaat
    10621 ttgagattca ttaaaagaca agttcaattt atcagttaag ttcttgcacg tttgaataaa
    10681 gcctgcatga aggtttgatg gtactggttt aggtattttt cattaattgt agaagtatat
    10741 cagtctcaga aacaatatat tcatcataac cagtatcaaa aagacgatcg tcaacccttc
    10801 cgatattcca atgaaaattc cactttgaaa aatacccttt gtcgaaaaaa tagtgataga
    10861 ttggcaacag ttcacttaaa ttatttctat caaa
//
LOCUS       DANHPA010000083        10826 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.083, whole genome shotgun sequence.
ACCESSION   DANHPA010000083 DANHPA010000000
VERSION     DANHPA010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 10826)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10826)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10826
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.083"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(82..1254)
                     /locus_tag="PTC28_001786"
     CDS             complement(82..1254)
                     /locus_tag="PTC28_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5717064.1"
                     /translation="MKKYPIAIWMLAIGAFAIGMTEFVIMGLLPNVANDLNVSVSQAG
                     QLITGYALGVAIGGPIIVMLTFRLNRKALLMLLMGIFILGNILGGLSPNYTTLMLSRI
                     VTSLAHGSFFGIGSILAASMVASQYRASAMALMFMGLSLSNILGVPFGTLIGQKLGWH
                     MTFLIIAVIGVIALIGIMMFVPMPKEMRTASIKDELRILKEKRLWLTLGMTLFGFSSV
                     FAYFTYISSVLIDVTHIPEQFISSILIVFGVGVTLGNIVGGKLADWNLNKALMSIFII
                     FVLYFGLLYFIQFHPIIMVIGVFLFGFIGFSMSPSLQYKSTLISQEAPTLSSTLNQSA
                     FNIGNALGAFIGGLVVSTLPIASLSLIAPLLTLIGLVFLLWSIAVEQKEQVNTHSN"
     gene            complement(1447..2196)
                     /locus_tag="PTC28_001787"
     CDS             complement(1447..2196)
                     /locus_tag="PTC28_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDK5717065.1"
                     /translation="MLYIFLSLLGIIGGILSGMVGIGGAIIIYPALLIIPPMLGLPSY
                     NAYIASGLTSAQVFFSTLSSSIRARQTPDFSLKLILWMGSSMLIGSALGATIAEVLTE
                     RFVNSVYVVIAILALVLIMIKIKPQTEANLKFSKVVLLLTGLVIGAISGVIGAGGAFI
                     IIPVLLVFFKIPMHTVVANSVVIAFISSIGAFMFKLFQGYIPLGDALFLVVGSMLFAP
                     LGLKIGRQMPEYVQKVLVALLIIVSILNLIF"
     gene            complement(2196..2456)
                     /gene="cstR"
                     /locus_tag="PTC28_001788"
     CDS             complement(2196..2456)
                     /gene="cstR"
                     /locus_tag="PTC28_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016911203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="persulfide-sensing transcriptional repressor
                     CstR"
                     /protein_id="HDK5717066.1"
                     /translation="MEYDKKMINRIKRVQGQLNGVIKMMEEEQHCKDIVTQLSASKGS
                     LQRLISIIISENLVECIKAAEENEENRQQIIDEAVNLLVKSK"
     gene            2596..3672
                     /locus_tag="PTC28_001789"
     CDS             2596..3672
                     /locus_tag="PTC28_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE/DsrF/DrsH-like family protein"
                     /protein_id="HDK5717067.1"
                     /translation="MNFSELEIKSLKKDELERLGELGQLIDVRTDEEYQEGHIRGAKS
                     WPLDQIELFKGDKNQTYYLYCRSGKRSAQASSALAKRGYNVVSLDGGFVAYSEEVEAH
                     RTEDIIINESVPLKEERQKIDLSGLQCPGPILNVSKAMQNMSEGEQIEVNVSDFGFYS
                     DVQSWVKQTGHQLIRLNQDNQGVHAVLQKSNAPANTQSKKGNGTTIVLFSGDLDKAIA
                     AMIIANGAKAAGRDVSVFFTFWGLNALKKTIQQETQVNKKGIAKMFDWMLPKQPEKMP
                     ISKFNMFGLGNFMMRYVMRQKNIDTLPQLINQAIEQDIKLIACTMSMDVMGITKEELR
                     DEVTFGGVGTYIGDTENARHNLFI"
     gene            3691..5040
                     /gene="cstB"
                     /locus_tag="PTC28_001790"
     CDS             3691..5040
                     /gene="cstB"
                     /locus_tag="PTC28_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="persulfide dioxygenase-sulfurtransferase CstB"
                     /protein_id="HDK5717068.1"
                     /translation="MYFKQFYNEHLSQASYLIGCQRTGEAMIIDPVRDLSEYIKTAEK
                     EGLRIDYATETHIHADFASGIRDAAEKLNATIFISGEGNESLGYRNIPEQAKFVKDGD
                     VIQVGYIKIEVLHTPGHTPESISFLLTDEGAGATQPMGLFTGDFIFVGDIGRPDLLEK
                     AVQIEGSTAVGAKQMYQSIARVRKLPDFIQIWPGHGAGSPCGKSLGAIPMTTLGYEKQ
                     NNWAFNQPDEDTFITTLTTNQPEPPKHFAQMKQMNQYGGARYEPYLVSPSYSEDRMMI
                     DLRSAHAFHGGHVVGAINIPYNQNFINQIGWYLDYDASIDLIGDKQVVDRATKTLQLI
                     GYDNVAGYKQPQGSIVTQHVHSKDFIGDEEHVLDVRTDQEWHNGHLPQAVHVPHGQLK
                     DATLPFNKEDEIYVHCQSGVRSSIAVGLLEAKGYYNVINIREGYIAFSDETKNKIVK"
     gene            5172..5732
                     /locus_tag="PTC28_001791"
     CDS             5172..5732
                     /locus_tag="PTC28_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717069.1"
                     /translation="MINIISAIGSIGTFIMALFYFISVSIQLYQMKMSFLPALGFNQI
                     LMTRDGEKLKLRNTSAHQIEDAQWGEDYLKLFNLGAGAAKQIKIEVYLDEENVLQSKY
                     VSILPSKESYLLPINKDVFDELDRTIENNGYESNLQIKIQYQHNVSRKVQTLYLQGHI
                     DSFNRYDESSVYELQFIQPENQNTKA"
     gene            complement(5864..6619)
                     /locus_tag="PTC28_001792"
     CDS             complement(5864..6619)
                     /locus_tag="PTC28_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDK5717070.1"
                     /translation="MLLDRFVNANYDQLNDNDLHIIKTVHDHIDAMKKMKIQDLALVA
                     HTSISSIHRLCRKLGFDGYSELKTYIKLNYQKEALPQDTIALLEHDIQQTMKHLNHID
                     FSSLNQRIDEAPFIYIYGTGTAQQSVAQDVQRQILALHKKSVVLKNELELLHALDMMS
                     PCELLIIISLSGDTTRFEEVIKSIKARELSYISVTTLQDNSLAQHATFNIYVHSTPFR
                     LFNQVDNSSFVTFHLAFDMILRKYSTWKLKQPH"
     gene            6888..8474
                     /locus_tag="PTC28_001793"
     CDS             6888..8474
                     /locus_tag="PTC28_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDK5717071.1"
                     /translation="MNAIKRFGSAMIVPVILFAFFGIVVGLATLFKNENIMGSIAAKG
                     TTWFNIWSVIESGGWTIFTHMELAFVIGLPISLAKKAQGRATLAALMIYLVFNNFINA
                     LLTIWPDVFGVDLSKGVENVTGVKTIAGIPTLDTSIIGAILISAIAIWIHNRFYDQKL
                     PEILGIFQGLTFVVMIGFFLMIPVAIVTAFVWPYVQVGIKSLQGVMLHSGLIGVWLFH
                     FLERILIPTGLHHFIYTPFEFGPTAVDGGLRPYWIHHLNEFSNSTKALKELYPYGFLL
                     QGNIKMFGLLGVALAMVFSTPKANRKKVIALVVPASLTAIFAGITEPLEFTFLFIAPY
                     LFAIHAVLGATMVTLMNAFGVVGLMGGGLIEIAATNWIPLFGNHASVYIAQFIIGFIF
                     TGIYFVTFKYLIEKFDIPIPGRKGDEGAKLFTKKDYQQKQSASKQALVENEYDQKAIY
                     YLEGLGGKDNIVDVTNCATRLRLTVKDPNLVRESDYFTHEQMAHGLVKSGRSIQVIVG
                     MSVPQVRDYFEEKLEKEEEV"
     gene            8475..9800
                     /locus_tag="PTC28_001794"
     CDS             8475..9800
                     /locus_tag="PTC28_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-alpha-glucosidase"
                     /protein_id="HDK5717072.1"
                     /translation="MKKFNITIAGGGSTFTPGIIMMLLDYLDEFPIDTIKLYDNDEAR
                     QKTIADACEIILKERAPEMKLIASVDPEEAFTNVDFVMAHIRVGKYAMRELDEKIPLR
                     HGVVGQETCGPGGIAYGMRSIPGVLELVDFMEKYSPDAWMLNYSNPAAIVAEATRKLR
                     PNSKILNICDMPIGIEELIAKNLGLESRKEFEVNYYGLNHFGWWTDIRDKKGNSLMPE
                     VIRHVSEHGYATDGSSELEKQESWNNTLKKARDVQALDPQTIPNTYLKYYFFPTQEVE
                     HSNPEYTRANEVMDGREKFIFTQCQNIIDKGTAKDTELTVDEHASYIVDLAKAIAYNT
                     KERMLMIVENQGAIINFDPTAMVEVPCIVGSNGPEKLVVGEIPRFQKALMEQQVGVEK
                     LVVEAYEEASYQKLWQAITLSKTVPNAAVAKAILDDLIEANKAYWPELK"
     gene            complement(9891..10751)
                     /locus_tag="PTC28_001795"
     CDS             complement(9891..10751)
                     /locus_tag="PTC28_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDK5717073.1"
                     /translation="MTRIAVIGPGAVGTSIAVALSDEYEVTLVGRRAQTLTFEDYVDQ
                     TTRTLSVNALQEATEPFDLIFIAVKTHQLANVIAKLPELTHDKTTLILAQNGYGMLEQ
                     LKDYRAYQAVVYISGQKKDSHVTHFRDYKLHLQSDAVTEQLAQAFSATKLELVLEPYI
                     QQAIWYKLIVNLGINTVTALGRDTARVLKDERMAELCHQLLIEGEQVARAEGIHFDTD
                     FVTSIMNIYAGYPDEMGTSMYYDTMNQHPLEVEAIQGYIYRRAKAHQLDTPHLETIYT
                     LLAYQNQSRL"
BASE COUNT         3531 a         1836 c         2261 g         3198 t
ORIGIN      
        1 aatcagcagc ataatgaaac atatagagag ggcaacatag tattaaaaaa tttttaaatg
       61 tcacatttta taaattaaac tttaattcga atgtgtattg acctgttctt tttgttcgac
      121 agcaatactc cataataaaa agacgagtcc aattaatgtg agtaatggcg cgattaaact
      181 tagactagcg atggggagtg tgctgacaac aagaccgccg ataaaagcac ctaatgcatt
      241 tccgatatta aaggcggatt gattgagtgt actggaaagt gtcggcgctt cttgggaaat
      301 gagcgtactt ttgtattgaa gtgaagggct catgctaaag ccaataaaac cgaaaagaaa
      361 gacgccgatc accatgatta tcgggtggaa ctgaatgaag tagagcagtc caaagtaaag
      421 cacaaaaata ataaaaatgc tcattaatgc tttgtttaaa ttccaatctg caagcttgcc
      481 acctacaata ttaccgagtg tcacgccaac accgaataca atcagaatag atgaaatgaa
      541 ttgttcagga atgtgggtca catcgatgag tacagatgaa atataagtaa agtaggcgaa
      601 cacactacta aaaccgaaca atgtcatccc gagagttaac cacagtcttt tttcttttaa
      661 aatgcgtaat tcatctttga tagaagcggt acgcatttct tttggcatcg ggacaaacat
      721 cataatgccg atgagtgcaa tgacgccaat gacagcaata attaaaaacg tcatgtgcca
      781 accgagtttt tgtccaatta atgtaccgaa tggtacgccg agaatgttgc tcaggctgag
      841 acccataaac attaatgcca ttgcacttgc acgatattgg cttgcgacca tacttgcagc
      901 taaaatagag ccaatgccga aaaatgagcc atgtgcaagt gatgtgacga tacgactgag
      961 catcaatgtc gtgtaattcg gactgagacc accgagaatg ttaccgagaa taaaaatgcc
     1021 catcagcaac attaacaacg ctttacgatt aagtcggaaa gtgagcatga cgatgatagg
     1081 gcctccaatc gcgacaccta aagcgtaacc agtaatcaat tgtcctgcct ggctcacaga
     1141 cacatttaaa tcattcgcca cgttaggaag taagcccatg atgacgaatt cagtcattcc
     1201 aatcgcaaat gccccaatcg ctaacatcca tattgcaata ggatacttct tcataatgga
     1261 tacctcctga tttatctttt taacagagtt atcgtacata tcttatagtt ataattcaat
     1321 atgtgggtct ttaccagaaa atcaaagtaa gctcttgttc gtatagtttt gttgatattt
     1381 agttacctta tgaactaggt ttgatttgta tggttggaag agctgatttc attaaagtac
     1441 gacggcttag aaaatcaaat tcagtataga gacgatgata aggagagcaa ccaacacttt
     1501 ttggacgtac tcaggcattt ggcgtcctat ttttaagcca agtggcgcaa ataacatact
     1561 tccaacaact aagaataatg catcaccaag cggaatatac ccttgaaaaa gtttaaacat
     1621 aaaggcccct atagaagaaa taaaagcaat cacaacacta tttgccacga cagtatgcat
     1681 cggtattttg aaaaaaacta ataatactgg aataattata aaggcgcctc cagccccaat
     1741 cacaccagaa attgcaccaa tgactaaacc tgtcaatagc agtacaactt tactgaattt
     1801 taagtttgct tctgtttgtg gtttgatttt aatcattatt aagacgagtg ccaatatagc
     1861 aatgacaaca tatacgctat ttacgaatct ctctgttaat acttctgcaa ttgtagctcc
     1921 taacgcacta ccgatgagca tgctacttcc catccaaaga atgagtttaa gagaaaaatc
     1981 cggtgtttga cgcgcacgta ttgaactgct taaagtacta aaaaatactt gcgcagatgt
     2041 aagtcctgaa gcgatataag cattgtaaga agggaggcca agcatagggg gaataatgag
     2101 tagtgcggga taaataataa tcgcaccgcc tatacctacc atacccgaga gaataccacc
     2161 aataataccg aggagcgaga gaaaaatata aagcattatt tacttttcac caataagttc
     2221 acagcttcgt caatgatttg ttgtctattt tcttcgtttt cttctgctgc cttaatacac
     2281 tctactaaat tctcactaat aataatacta atgagacgtt gtaacgaacc tttagaagca
     2341 cttaattgtg tcacaatatc cttgcagtgc tgttcttctt ccatcatttt aatgacgcca
     2401 tttaattgac cttgaactct tttaattcgg ttaatcattt ttttatcgta ttccatacct
     2461 tatgtcctcc taaagtaata tatgaggttt atcatataaa aaagcaagaa atttgtcaaa
     2521 tacccccgta ggtatttgac aagagattca gcatccatta ttatacccct ataggtattt
     2581 ggaggaggtc taatattgaa ttttagtgaa cttgagataa aaagtttaaa gaaagatgaa
     2641 cttgagcgat taggagaact agggcaattg atagatgttc gtacggatga agaatatcaa
     2701 gaaggacaca tccgaggggc aaaatcttgg ccgttggatc aaattgaatt atttaaaggt
     2761 gataaaaatc aaacgtatta tctttattgc agaagtggaa agagaagtgc acaagcgagt
     2821 tctgctttag ctaaaagagg atataatgtt gtttcattag atgggggatt tgtcgcatac
     2881 agtgaagagg tggaggctca tcgtacggaa gatatcatta ttaatgagtc tgtgccttta
     2941 aaagaagaac gtcaaaaaat agatttatca ggtttacaat gcccaggacc tattttaaat
     3001 gtgagtaaag caatgcagaa tatgtcggaa ggtgaacaga tagaagttaa tgtttcagat
     3061 tttggttttt acagtgatgt tcaaagttgg gtgaagcaga cagggcacca gttaatacgc
     3121 ctaaatcaag ataaccaagg tgttcatgca gtattacaaa aaagtaacgc acctgcaaac
     3181 acgcaaagta aaaaaggcaa tggcacgaca atcgtgttgt ttagcggtga tttagataaa
     3241 gctattgcgg caatgattat tgctaatggg gcaaaagcag ctggacgaga tgtctctgtc
     3301 ttttttactt tttggggatt aaatgcattg aaaaaaacta tacaacaaga gactcaagtg
     3361 aacaaaaaag gtatagccaa aatgtttgat tggatgttac cgaagcaacc agaaaagatg
     3421 ccaatttcta aatttaatat gtttggttta ggtaacttta tgatgcgtta tgtcatgaga
     3481 caaaaaaata ttgatacact accacagtta ataaatcaag cgattgaaca agacattaaa
     3541 ttgatcgcat gtacgatgag tatggatgtg atggggatta cgaaagagga gttaagagat
     3601 gaagtcacgt ttggcggtgt aggaacttat attggtgaca ctgaaaacgc acgccacaat
     3661 ttatttatat aatgttaagg agagattgat atgtatttca aacaatttta caatgaacat
     3721 ttgtcacaag cctcttattt aattggatgt caacgtacag gagaggcgat gattatcgat
     3781 ccagtcagag acctgtcaga atatattaaa acggcagaaa aagaagggtt gcgtattgat
     3841 tatgccactg aaacacatat tcatgctgac tttgcttctg gtatacgcga tgcagcggaa
     3901 aaattaaatg cgaccatctt tatttcaggt gaaggaaatg aatctttagg ataccgtaat
     3961 attcctgaac aggcaaagtt cgttaaagat ggcgatgtca ttcaagtggg ttacattaaa
     4021 atcgaggtat tacacacgcc tggacatacc cctgagagca ttagcttttt attgacagat
     4081 gaaggtgcag gtgcaacaca accgatggga ctatttacag gagactttat ttttgttgga
     4141 gacatcggta gacctgattt attagaaaaa gcggtacaaa tcgaagggtc tacagcagtg
     4201 ggtgccaagc aaatgtatca atctatagct cgtgtacgta aattgccaga ctttattcaa
     4261 atctggccag gacatggtgc aggcagtcca tgcggtaaat cgttaggtgc aattcctatg
     4321 acaacattag gttatgaaaa acaaaataac tgggcattta atcaaccaga tgaagataca
     4381 tttattacaa ctttaacaac aaatcaaccc gaacccccta aacattttgc acaaatgaaa
     4441 caaatgaatc aatatggagg tgcacgctat gagccttatc ttgtgagccc ttcttatagt
     4501 gaagaccgaa tgatgattga tttacgtagt gcgcatgcat ttcatggtgg tcatgtggta
     4561 ggtgcgatta atattccgta taatcaaaac tttattaatc aaataggatg gtatctagat
     4621 tatgatgcat cgattgattt aattggtgat aaacaagtgg ttgatcgtgc aacgaaaaca
     4681 ttgcaattga ttggctatga taatgtagca ggctataagc aacctcaagg cagtatcgta
     4741 acacaacatg tgcatagtaa agattttata ggagacgaag aacacgtttt agatgttcga
     4801 acagaccaag agtggcataa tggacattta ccacaagcag tgcatgtgcc acatggtcaa
     4861 ctaaaggatg caactttacc tttcaataaa gaagatgaaa tttatgtcca ttgccaatca
     4921 ggtgtgagaa gttctattgc tgtaggcttg ctagaggcaa aaggttatta caatgtaatc
     4981 aatattcgtg aaggctacat tgctttttcg gatgaaacga aaaataaaat tgtgaagtag
     5041 atagaatcac tacaacatag taggataatg ccctccgtac gcgcttggta atagttaata
     5101 tcctcagttt aaaacggtct ttaacgtgga ataagtttaa aataaaattg acttattaga
     5161 ggtgtatcga gatgattaat atcatttctg cgataggttc gattggtacg tttattatgg
     5221 cattattcta ttttatctct gtatcaatac agttgtacca aatgaaaatg agttttttac
     5281 ccgcactcgg atttaaccaa attttgatga cgcgtgatgg agaaaagtta aaattaagaa
     5341 atacatcagc acatcaaata gaagatgctc aatggggcga ggattatttg aaattattta
     5401 acctgggtgc gggtgcggct aaacaaatca agatagaagt gtacttggat gaagaaaacg
     5461 tgttacagag caagtatgtc agtattttac cgagcaaaga aagttatctt ctaccgatta
     5521 acaaggacgt atttgacgaa ttagatcgta ctattgaaaa taatggctat gaatcgaacc
     5581 tccaaattaa aattcaatat caacataacg tcagtcgaaa agtacaaacg ctctacttac
     5641 aagggcatat tgatagcttc aatcgttacg atgaaagctc tgtctatgaa ttacaattta
     5701 tacaaccaga aaatcaaaac acaaaagcat agtttgatat gtgcaagggt agtgcgtcca
     5761 ctgtggtggc atacccttgt tttttaatgg attcaaacag caccaacatt gttaaatcac
     5821 aaacgacagc gacagcatag atttagctac tgcagtattt aaattaatgt ggttgcttta
     5881 acttccaagt gctatatttt ctcaaaatca tatcaaaggc gagatggaaa gtgacgaaac
     5941 tagagttgtc aacttgattg aacaaacgga aaggtgtgct atgaacatag atgttaaacg
     6001 ttgcatgttg cgctaacgaa ttgtcttgaa gtgtcgtcac actaatatag gaaagttctc
     6061 gtgctttaat agatttgatg acttcttcaa aacgtgtagt atcaccggaa agcgaaataa
     6121 taatgagcaa ttcacatggc gacatcatat cgagcgcatg taaaagttct aattcatttt
     6181 tcaagacgac agattttttg tgcaatgcga gaatttgacg ttgtacatct tgtgcgacgg
     6241 attgttgtgc tgtgcctgtc ccataaatat aaataaaagg cgcttcatca atacgttggt
     6301 taaggctcga aaagtcgatg tgattgagat gcttcatcgt ttgttgaata tcgtgttcaa
     6361 gtaatgcaat agtatcttgt ggtaatgctt ccttttgata gttgagttta atatacgttt
     6421 ttaattcgct atagccatca aaccctaatt tacggcaaag acgatgaatg gacgaaatgg
     6481 aagtgtgtgc gactaaagct aagtcttgaa ttttcatctt cttcatagca tcaatatggt
     6541 catgaacggt tttgataata tgtaaatcat tgtcgttcaa ctggtcatag tttgcattta
     6601 caaatcgatc taatagcacc ttcaacgcct cctgaaaata ttttcatcaa ttgtaaatat
     6661 aacccaatcg tactatgtgc ttccaaaaag tgtcaaatgc attccaaaat gtaagcgctt
     6721 caattatatt gaggctagat gaaatgcatc gtttgtcgac acagttcatc aaatgaaaaa
     6781 gattagaatg attaaaagta attcagagta gtcacgcgtg tttaatcata acagcgcgat
     6841 atcggttcgc acagaaatct tctaatctga tggagggatt tttgctcatg aatgcaatca
     6901 aacgttttgg gagtgcgatg attgttcctg ttattctatt tgcgtttttc ggtattgttg
     6961 ttgggttagc gacactattt aaaaacgaaa atattatggg gagcattgca gcaaaaggaa
     7021 caacgtggtt taacatttgg agtgtgattg agagtggggg ttggaccatc ttcacccaca
     7081 tggagttagc ttttgtgatt ggtttgccta tctcattagc gaaaaaagca caagggcgtg
     7141 caactttagc agcattgatg atttatctcg tatttaacaa tttcatcaat gcattactga
     7201 cgatttggcc ggatgtgttt ggggttgatt taagtaaagg ggtcgaaaat gttacgggtg
     7261 ttaaaacgat tgcaggtatc ccgacattag atacaagtat tatcggtgcc attttgatct
     7321 cagcgattgc gatttggata cataaccgtt tttatgatca aaagttgcct gagatattag
     7381 ggattttcca agggcttaca tttgttgtca tgattggttt ctttttgatg attccagttg
     7441 caattgtcac agcatttgta tggccatacg tccaagtagg gattaaatca ttacaaggtg
     7501 tgatgttaca ttcagggctc atcggtgtat ggttattcca ctttttagag cgtattttaa
     7561 taccaactgg gttacatcat ttcatttata ccccatttga gtttgggcca actgcggtag
     7621 atggtggttt gagaccttat tggattcatc atcttaatga attttctaac tcaacgaaag
     7681 cattaaaaga actctatcca tatggtttct tattacaagg aaatatcaaa atgtttggat
     7741 tgcttggtgt cgctttagca atggtgttct caacgccaaa agcgaataga aagaaagtca
     7801 tcgcattggt tgtaccagct tcattaactg caatatttgc tggcattaca gagccattag
     7861 agttcacatt cttattcatt gcaccatatt tattcgcgat tcatgcagta ttaggcgcaa
     7921 caatggtgac attaatgaat gcgttcggtg tcgttggtct gatgggtggt ggcttgattg
     7981 aaattgctgc gacgaactgg attccattat tcggtaatca tgcgagtgta tatatcgcac
     8041 aattcattat cggctttatt ttcacaggta tttattttgt gactttcaaa tatttaattg
     8101 aaaagtttga tattccaatt ccaggacgta aaggtgatga aggtgctaag ttgtttacga
     8161 aaaaagatta tcaacaaaag caaagtgcat ccaaacaagc attagttgaa aatgaatatg
     8221 accaaaaagc gatttattat ttagaaggtc tcggtggcaa agacaacatt gttgatgtga
     8281 cgaactgtgc aacacgttta cgtttaactg ttaaagatcc aaatttagtg agagaaagtg
     8341 actactttac acatgaacaa atggcccatg gattagtgaa gagtgggcgt agtattcaag
     8401 tgattgttgg catgagtgtg ccacaagtca gggattactt tgaagaaaag ttggaaaaag
     8461 aggaggaagt ataaatgaag aagtttaata ttacaattgc aggtggcgga agtacgttta
     8521 caccggggat tattatgatg ttattggatt atttagacga gtttccaatt gataccatca
     8581 aactttatga taatgatgaa gcccgtcaaa aaacgattgc agacgcatgt gaaatcattt
     8641 tgaaagagcg tgcaccagaa atgaaactga ttgccagtgt ggatccagaa gaagcattta
     8701 cgaatgtaga ttttgtgatg gcacacattc gagtaggtaa atatgcgatg cgtgaattgg
     8761 atgaaaagat tccattacgc catggtgtcg tcggtcaaga aacttgcgga cctggtggta
     8821 ttgcatacgg gatgcgttct attccaggtg tgcttgaatt ggttgacttt atggaaaagt
     8881 attctccaga tgcgtggatg ctcaattact caaaccctgc agccattgta gctgaggcaa
     8941 cacgtaaatt acgtccgaat tctaaaatat tgaacatttg cgatatgccg attggaattg
     9001 aagaactgat tgcgaaaaat ttaggacttg aatctcgtaa agagtttgaa gtgaattatt
     9061 acggtttaaa ccactttgga tggtggacag atattcgcga taaaaaaggt aattctttaa
     9121 tgcctgaagt aattcgtcat gtcagtgagc atggttatgc gacagatggt agttctgaat
     9181 tagaaaagca agagagctgg aacaatacac ttaaaaaagc gcgtgacgtt caagcgttag
     9241 atccgcaaac aatcccgaat acgtatttga aatattactt cttcccaacg caagaagtag
     9301 aacattcgaa tccagaatat acacgtgcga atgaagtcat ggatgggcgt gaaaagttta
     9361 tctttacgca atgtcaaaat atcatcgaca aaggcacagc gaaagacacg gaattaacgg
     9421 ttgatgagca cgcgtcatac attgtagacc ttgcaaaagc aatcgcatac aatacgaaag
     9481 agcgtatgtt gatgatcgtt gaaaaccaag gcgcaattat taactttgat ccaacagcca
     9541 tggtagaagt gccttgtatt gtaggtagca atggtccaga aaagttagtc gttggcgaaa
     9601 ttccacgctt ccaaaaagca ttaatggaac aacaagtcgg tgtggaaaaa cttgttgtag
     9661 aagcatatga agaagcatca tatcaaaaac tatggcaagc gataacttta tcaaaaacag
     9721 taccgaatgc agcagtagca aaagcgattt tagatgattt aattgaagcg aacaaagcgt
     9781 actggccaga gttgaaataa gcataaagaa ggaagtccgg ggagcgtgaa ttttctcaga
     9841 cttccttatt caaattttcc aatccaagta ttgtaactac ttacttttca ctataaccta
     9901 ctttgatttt gataggcgag caaggtgtaa atggtctcca aatgtggtgt gtccaattga
     9961 tgggctttgg cacgtcgata aatgtagcct tgtatcgctt ctacttctaa aggatgttga
    10021 ttcatcgtat cgtaatacat gctcgtcccc atttcatcag gatagcctgc ataaatattc
    10081 atgattgatg tgacgaaatc cgtatcgaaa tgtatccctt ctgcacgtgc cacttgttcg
    10141 ccttctatta acaattggtg gcaaagttca gccatccgtt catctttaag gacacgggca
    10201 gtatcgcgtc cgagtgcagt gacagtatta ataccaagat tgacaattaa tttataccaa
    10261 atcgcttgtt ggatgtaggg ctccaacacg agttctaact ttgttgctga gaatgcttgt
    10321 gcgagttgtt ctgtgacggc atcagattgg agatgtaatt tatagtctct gaagtgcgtc
    10381 acatggctgt cttttttctg accactgata taaacaaccg cttgataggc gcgataatct
    10441 ttcaattgtt caagcatacc atagccattt tgtgcaagaa tgagggtggt tttgtcgtgt
    10501 gtgagttcgg gtagtttggc aatcacattc gccaattgat gtgttttcac ggcgataaaa
    10561 attaaatcaa acggttctgt cgcttcttgg agtgcattca cggaaagtgt acgagttgtc
    10621 tgatctacat aatcttcaaa tgttaaagtt tgagcacgac gtccgaccag tgtgacttcg
    10681 tattcatcgg atagggcgac tgcaatagat gttcctactg cacctggacc aataacagca
    10741 attcgagtca ttggagatca cctttcttct aattaattta agtatttttg ttccacatat
    10801 gaatatgctt taatttatta tgtttt
//
LOCUS       DANHPA010000084        10461 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.084, whole genome shotgun sequence.
ACCESSION   DANHPA010000084 DANHPA010000000
VERSION     DANHPA010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 10461)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10461)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10461
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.084"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            146..874
                     /locus_tag="PTC28_001796"
     CDS             146..874
                     /locus_tag="PTC28_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HDK5717074.1"
                     /translation="MRILAILIYLLVVLIRLNIVNTPYLDENTKSLIFIFMTLLVPTF
                     IIRPLFNKNTKNLIPLDYKELEASVELPQGTKMYTKASLLLKSAYVKGDRSKSSIVLN
                     PELIEKVDIDELRFLIYHEVCHIKNNDITKNQLFRALSYGVLPFLLVFISGFIEFKSM
                     NLFIAYIVLAVIIYLSGMLLYFLRIRRRELKCDSYASIHTSSATGIRALMTLKRLGIL
                     KDTKLVLFASHPNLDKRIQNLKNS"
     gene            complement(1123..1911)
                     /locus_tag="PTC28_001797"
     CDS             complement(1123..1911)
                     /locus_tag="PTC28_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HDK5717075.1"
                     /translation="MTKELRAIVNTCREDSNLSPVSKIEIYSFFDPFDKDSFKLSAVL
                     SKLRIEYHQYIRIRHILNPSLRVLTKCQAQSTSDRDNIALAFKAAELQGRARAHRFMH
                     LIQNEIIPKRDIVTEDMIAKCIINAGLDYDVYLDDLKNGQLRESLKVDLHIAREMEVE
                     QAPSLVFFNEDIQAEGLKVEGLYPYHIYTYIINEMMGSPIEKSLPPKLCEYIQQKQLV
                     TEEELLTIYEWPEKTLQKELKKLMLQQKVRKLNYPDGEFWKSIM"
     gene            complement(1928..2300)
                     /locus_tag="PTC28_001798"
                     /pseudo
     CDS             complement(1928..2300)
                     /locus_tag="PTC28_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167281.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="globin"
     gene            complement(2648..3229)
                     /locus_tag="PTC28_001799"
     CDS             complement(2648..3229)
                     /locus_tag="PTC28_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HDK5717076.1"
                     /translation="MVIEREIEFKQLLDADSYVSIKTQHFKGQTPFKQVNYYIDTVDF
                     QIQSQKMALRIREKADGTFELTLKVPDTVGLLEYNAQFHMQPAENMTLKPSDIDDDIR
                     EVLEQRHVQLDALKILGALTTYRLETQTDEGLLVLDHSLYLGTEDYELEFEVRDFEAG
                     QQAFNNLLAQLKLSPVVPKNKVQRFFEYQRKLQ"
     gene            3360..3707
                     /locus_tag="PTC28_001800"
     CDS             3360..3707
                     /locus_tag="PTC28_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011276223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717077.1"
                     /translation="MRIYVNEVKIQDNRILCYTDQPTEGLTEVGQMLADSDRHAFVYL
                     LDDGSSFSYLLFVEETWSMLHEHRDKEIVINDSLTLTKFSEELDYLLDNIKGNSNYGK
                     AFVSAVEETFELE"
     gene            3724..4362
                     /locus_tag="PTC28_001801"
     CDS             3724..4362
                     /locus_tag="PTC28_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase family protein"
                     /protein_id="HDK5717078.1"
                     /translation="MNQWEIFLAPYQQAIDELKVKLKGLRKQYQVNEHNSPIEFVTGR
                     VKPISSIVDKANKRGIAFDCLREEMYDIAGLRMMCQFVDDIDIVVELLRQRKDFKVIE
                     ERDYISNTKQSGYRSYHVIIDYPIETLDGTKSILAEIQIRTLAMNFWATIEHTLRYKY
                     DGDYPPEIQTRLERAAEAAFLLDEEMSEIKEEIQEAQKYYSKKRASKHDHDD"
     gene            4374..5183
                     /locus_tag="PTC28_001802"
     CDS             4374..5183
                     /locus_tag="PTC28_001802"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD kinase"
                     /protein_id="HDK5717079.1"
                     /translation="MRYVILSKGDPKSEALKHKMMCHMQDFNMIEDAENPEIVISVGG
                     DGTLLQAFHHYSHMLSRCAFVGIHTGHLGFYADWLPHEVEKLVIAINKAEFQVIEYPL
                     LEVIVRYNDEGYETRYLALNEATMKTENGSTLVVDIDIRGQHFERFRGDGLCVSTPSG
                     STAYNKALGGALIHPSLEAIQLTEIASINNRVFRTVGSPLVLPKHHTCHVKPVDHGTI
                     LSTVDHISVKHKNVNAVQYRVANEKVRFARFRPFPFWKRVHDSFISSGESL"
     gene            5180..6034
                     /locus_tag="PTC28_001803"
     CDS             5180..6034
                     /locus_tag="PTC28_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDK5717080.1"
                     /translation="MIFKYHVTESTTLKTFLYEQQFSKKTLSAIKQDGALLVNGTART
                     VRYSLQVGDILEVHLPTELPSSYLEPYDAPLNILYEDTWLLIVAKPSHQNTAPSREHP
                     HESLVEQALAHMQKRGERGIPHIVTRLDRNTMGIVIIAKSRHMHHLMNQCDIEKYYEC
                     ICERVLTAKGEIDQPIARASDSIINRIVSEQGKRARTIYWPLKNFKTYTWCRVKLETG
                     RTHQIRVHFQWLGAPLVGDTLYGQAHHTYQTQLLKCAEVRFVHPLTQERLTIKSEQPH
                     FEQLLTTL"
     gene            6063..7448
                     /gene="mgtE"
                     /locus_tag="PTC28_001804"
     CDS             6063..7448
                     /gene="mgtE"
                     /locus_tag="PTC28_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HDK5717081.1"
                     /translation="MVNDNEQILLDGEEMFNKALLDDFIAKGDIDGFREEFLALHSYE
                     QSEYFEISDDDVRQKMYRFLSPQEVSEFFENLEIDEEDYEALFETMNATYASQVLEQM
                     SYDNAVDILNQLSKKKIASLLMLMNREEAKEIKALLHYDEDTAGGIMTTEYISLTINT
                     PVHEALMRVKDQAPDAETIYVIFVVDEDKKLVGVISLRDLIIAENDAYIEDIMSERVI
                     SANVADDQEDVAQTMRDYDFIAMPVVDYQNHLLGIITIDDIVDVMDEEASEDYSRLAG
                     VSDIDSTDDTIFQTALKRLPWLLILTVLGMITASILGSFEETLEKVALLAAFIPIISG
                     MSGNSGTQSLAVSVRNISTGDIKEKSKIKLALRESGSGFLTGITCAVSLSLIIMLLYG
                     QPYLALIVGTSLTIAMTVGTTIGSVIPLVINRLGIDPAVASGPFITTINDIVSMLIYF
                     GLATTFMSYLT"
     gene            7459..9294
                     /locus_tag="PTC28_001805"
     CDS             7459..9294
                     /locus_tag="PTC28_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation:proton antiporter family
                     protein"
                     /protein_id="HDK5717082.1"
                     /translation="MEFVSLVVVIVAAMITPILIHRLKISFLPVVVAEILMGIIIGNS
                     FLNLVHRDEMLNILSTLGFIFLMFLSGLEIDFSAFKKDKGKEKKDEEQQSPSHFKLAL
                     SVFMLIMILSIILAYAFQWMGLIDDVLLMVIIISTISLGVVVPTLKEMNLMSTTIGQL
                     ILLVAVLADLATMLLLTVYGAIHASGGGTIWLIGILVVFTIVFYFLGGLFKKAPFLEK
                     LMAGTTQIGIRAVFALIILLVALAEGVGAEHILGAFLAGVVVSLLGPTQDLVEKLDSF
                     GYGFFIPIFFIMVGVDLDIPSLISDPKVLLIIPVLIIAFIISKLIPVMLLKKWFDMKT
                     TIASAFLLTSTLSLVIAAAKIAEKLGTISEEISGILILSAVITCVFVPIVFKKLIPIP
                     DEMQRSIKVAMIGKNQLSIPIAQGLRSQLYEISLYYRKDLSDHRVLSDDITMIEITDY
                     HSDILNRLGLYDSDIVVCSTNDDEINRRVALMAKAHGVERVICRLETNDESQELSSQG
                     IELFSNFQSNQILLKGMIETPNMLNLLSNVETSLYEIGMYNYAFDHMQLRHFPFGGDI
                     IFVRIIRNNESIVPHGDTQLQYGDRLIVTGTKEYVDQLKIELEMF"
     gene            9441..10211
                     /gene="fabI"
                     /locus_tag="PTC28_001806"
     CDS             9441..10211
                     /gene="fabI"
                     /locus_tag="PTC28_001806"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HDK5717083.1"
                     /translation="MMNLEGKTFVIMGIANKRSIGFGVAKVLDQLGAKLVFTYRKERS
                     FNELDKLIDQLNQSEKHVYQIDVQSDEEVVNGFEKIGQAVGKIDGVFHSIAFARVEEL
                     RGRFSDTSRDGFLLAQDISAYSLTIVAREARKIMNEAGSIVTSSYIGGEFAVPNYNVM
                     GVAKASLEASVKYLAADLGQDNIRVNSISAGPIRTLSARGVGGFTSILKEIEERAPLR
                     RNVDQEEVGKTAAYLLSDFSSGVTGENIHVDAGYHAIR"
BASE COUNT         3255 a         1775 c         2139 g         3292 t
ORIGIN      
        1 agttgactaa tgaattaacg gagaaccgtt tttttaatag agaatttata gagactgtat
       61 caaaccatta gaacaatgct tgtcattaaa gcatcgatga tagcaacaga cataacgtca
      121 cttttgcttt gaggaggtcg ttggtatgcg gattttggca attttaatat atcttttagt
      181 ggtgctcata aggttgaaca tcgtaaatac gccctatcta gatgagaata caaaaagtct
      241 tattttcata tttatgacgt tgttagtgcc gacgtttatt attaggccgc tttttaacaa
      301 gaatactaaa aacctaatac ctttagacta taaggaactg gaagcgtctg tagaattacc
      361 tcaaggaacg aaaatgtata cgaaagcatc actacttctt aaaagtgcat atgttaaagg
      421 tgaccgttct aaaagtagta ttgtactaaa tcctgaatta attgaaaaag tcgatattga
      481 tgaattaagg tttcttatat atcacgaggt gtgccatatt aaaaataatg acatcactaa
      541 aaaccaatta tttcgtgcat tgagttatgg tgttttacct tttttacttg ttttcatttc
      601 tgggttcata gaatttaaat ctatgaatct ctttatcgct tatattgtat tggcagtcat
      661 catctatttg agtggtatgc tcttatattt tcttcgcatc agacgtagag aattaaagtg
      721 tgacagctat gcaagcatcc atacaagcag tgcaaccggt attcgtgcat tgatgacatt
      781 aaaaagatta gggattttaa aggatacaaa attagttttg tttgcgagcc accccaattt
      841 agataagaga atacaaaatc ttaaaaacag ctgaaatacg aattgaaaat caaaaaaaca
      901 atagctcata aaatgtaaaa acgcctcgga tctgtgtagc aactatcact gcatagattc
      961 gaggctttat taatgttgtc tcgtaggtgg ttccaaagat aattttgaaa tgaatgacat
     1021 acggaaaata taaaagagag ggcgcttaaa ataaaacata gtgctcataa tttttaattg
     1081 acactaaagt aaaaagaggc tccccacaaa cgagacacct ctttacatta tcgacttcca
     1141 gaattcaccg tctggataat tcaattttct tactttctgt tgcaacatta atttctttaa
     1201 ctctttttgc aacgtttttt ccggccattc ataaatagtg agtaactctt cctcagtcac
     1261 cagttgcttt tgttgaatat actcgcataa ttttggtggt aagctttttt ctataggtga
     1321 tcccatcatt tcgttaatga tatacgtata aatatggtac ggataaagcc cttccacttt
     1381 tagcccttca gcttgaatat cctcattaaa aaaaactaaa gaaggggctt gttcgacttc
     1441 catttctcgt gcgatatgga ggtcgacttt caaactctca cgcaattgtc cattttttaa
     1501 atcgtcaagg taaacatcat aatccagccc agcattaata atacattttg caatcatgtc
     1561 ttctgttaca atatcgcgtt tcggtataat ttcattttga atgagatgca taaaacgatg
     1621 cgcacgtgca cgaccttgga gctctgctgc tttaaaggcg agtgcaatat tgtctcgatc
     1681 tgatgtactt tgtgcctgac atttcgtgag tacccgcaat gatgggttta aaatatgacg
     1741 aatacggata tattgatgat attcaattct taactttgac aaaacggccg atagcttaaa
     1801 actgtctttg tcaaatggat caaaaaaaga atagatttcg atcttactga caggtgaaag
     1861 atttgaatct tcacgacaag tatttacaat agctctcaat tctttcgtca tgtaatttca
     1921 cctacaatta attttctata ttgaccatgt gatttgctgt taaatgtaat ctttcgtaca
     1981 aataatcgcc cgcaccatga ggaagttggg cgtgcgtgat ggcagtatgc atattttcaa
     2041 gccaagcctc tttcgctttg tcatcgatag gaaaaggcaa atggcgcatt cttaacatcg
     2101 ggtggccatg ctcttgggta tataagtcag gtccccccta aaaattgcgt taaaaactgt
     2161 ttttgtttac gtgctgtttc tgcaaaatca cctggaaaca aatgattaat acgattatcc
     2221 tgttctacaa ggctatagaa gtgatcaatc agctgataga gcctttcttg tccaatcact
     2281 tcataaggcg tttgtgtcat ttatatcacc gctcatatga cttattatat ataaatcata
     2341 acatgaattt ttacatttca aagcaaaaac acttacatac aagatgtttc gtgtttgtag
     2401 ctgtactgaa taggattttt ggacaaattg aaggtacaag atgacaattt ttaaacgtac
     2461 aaaaattacc acctactttg aactcaacgt cattcaatag attgaaatta agctaagtca
     2521 tattgcttaa catcgtacat cactttatcc tcatcgttca ctttcaaatg ttatttttat
     2581 tattttacag tttatgaaat aagagataaa gaaaaacgca taatttgcta taaagctttt
     2641 aagtttttta ttgaagtttg cgttgatatt cgaaaaaacg ttgcacttta tttttcggga
     2701 caacgggtga taatttcagc tgcgccaata aattgttaaa agcttgttga ccggcttcga
     2761 aatcacgtac ttcaaactca agttcataat cttcagtgcc taagtaaaga ctatggtcaa
     2821 gtacgagtaa cccttcgtct gtctgtgttt ctaatcgata cgtcgttaaa gcacctaaaa
     2881 tttttagtgc atctaattga acgtggcgct gttcaagaac ttcacgtatg tcgtcatcga
     2941 tatcagaagg tttaagtgtc atattttctg ctggttgcat gtggaattgc gcattatatt
     3001 ctaacagacc aactgtgtca gggactttta atgtcagttc aaaagtaccg tcagcctttt
     3061 cacgaatacg caatgccatt ttttgagatt gtatttgaaa atcaaccgta tcgatatagt
     3121 aattgacttg tttaaaaggg gtctgacctt tgaaatgttg tgttttgata gatacataac
     3181 tgtctgcgtc caataattgt ttaaattcta tttcacgttc gattaccaat gaaatcactc
     3241 cttatgccat attatgccga attgaaactt gattgaaaag tatttagaat agggtagagt
     3301 tcaccaatga gagtgcgcgt gaattgtgtt aaaatgttag gtgatgagga ggaaagtata
     3361 tgcgtattta tgtcaacgaa gtaaaaattc aagataaccg tattttatgc tatacggatc
     3421 aacctacaga aggtctaaca gaagttgggc aaatgctcgc cgatagtgac cgtcatgctt
     3481 ttgtttattt attagacgat ggctcttcat tctcatactt attgtttgta gaagaaactt
     3541 ggtcaatgct tcacgaacat cgagataaag agatagtcat taatgattcc ttaacgctca
     3601 caaagttttc tgaggaatta gattacctgc tcgataatat taaaggtaat tcaaactatg
     3661 ggaaagcatt tgtgtctgct gttgaagaaa catttgaact cgaatgaagc ggagtgaggt
     3721 aagatgaacc aatgggaaat ttttctagca ccctatcaac aagctataga tgaattaaaa
     3781 gtgaaattaa aaggtttgcg caaacaatat caagtgaatg aacataattc accgattgaa
     3841 tttgtcacgg gtcgcgtcaa accgatttcg agtattgttg ataaggcgaa taaaaggggt
     3901 attgcattcg attgtctgcg tgaagagatg tatgatattg cgggacttcg aatgatgtgt
     3961 caatttgtgg atgatattga tattgtcgtc gagctattgc gtcaacgaaa agatttcaaa
     4021 gtgattgaag agcgcgacta cattagcaat acgaaacaaa gtggttaccg ttcataccat
     4081 gtgattatcg attatcctat tgaaacatta gatggaacga aatcgatact cgcggaaatt
     4141 caaattcgga cactcgcaat gaacttttgg gcgacgattg aacatacatt gcgttataaa
     4201 tatgatggag actatccacc agaaattcaa acgagactcg aacgtgccgc tgaagccgct
     4261 tttcttttag atgaagaaat gtctgaaatc aaagaagaaa ttcaagaggc acaaaagtac
     4321 tattctaaaa agcgtgccag caagcatgat catgatgatt gaggtgtgta taaatgcgtt
     4381 acgttatttt atctaaggga gatcctaaat cagaagcatt gaagcataaa atgatgtgtc
     4441 acatgcaaga ctttaatatg atagaggatg ctgaaaaccc tgaaattgtt atttctgtcg
     4501 gtggtgatgg cactttactt caagcgttcc accattatag ccatatgttg tcacgttgcg
     4561 catttgtcgg gatacataca gggcatctcg gtttttatgc agattggctc cctcatgaag
     4621 ttgaaaagtt ggtcatcgcg attaataaag ctgagtttca agtgattgaa taccctttgt
     4681 tagaggtgat tgtccgttat aatgatgaag ggtatgaaac acgttatctt gcattaaatg
     4741 aagcaactat gaaaactgaa aatggcagta cgctagtcgt agatattgat attcgtggtc
     4801 aacattttga acgttttaga ggcgacgggt tgtgtgtttc tacgccatca ggttcgacgg
     4861 cctataacaa agcgttaggt ggggcgctca ttcatccgtc attagaagcg attcagttga
     4921 ctgagattgc gtcgattaat aatagagtat tccgtacagt cggatcacca ctcgtattgc
     4981 ctaaacacca tacatgtcat gtcaaaccgg ttgatcacgg tacgattttg tcaactgtcg
     5041 atcatattag cgtcaaacat aaaaatgtga acgctgtcca ataccgcgtc gccaatgaaa
     5101 aagtacgatt tgcacgtttt agacctttcc cattttggaa acgtgtgcat gattcattca
     5161 tttctagtgg tgaatcattg tgatttttaa atatcatgtg acggaatcga caacgttaaa
     5221 aacattttta tatgaacaac aattttcaaa aaagacgttg agcgccatta aacaagatgg
     5281 cgctctcctt gttaatggca cggcacgtac tgtacgctat tctttgcaag tcggtgatat
     5341 attggaagtc catttgccga cagaactacc gagttcgtat cttgaacctt acgatgcgcc
     5401 tttaaatatt ttatatgagg atacgtggtt gttgattgtg gccaagccga gccatcaaaa
     5461 cacagcacct tcacgtgagc atccacatga aagtttggtg gagcaagcac tggctcatat
     5521 gcaaaagcgt ggtgaacgcg ggattccgca tattgtcaca cggctggatc gcaatacgat
     5581 gggcatcgtc attatcgcaa aatcacgtca tatgcatcat ctcatgaatc aatgcgacat
     5641 agagaagtat tatgaatgta tttgtgaacg cgttttgaca gcaaaaggcg agattgatca
     5701 accgattgca agagcgtcag atagtattat taatcgaatt gtctcggaac aggggaaacg
     5761 agcgcgaacc atttattggc cacttaaaaa tttcaagact tatacatggt gccgtgttaa
     5821 acttgaaacg ggtagaacac atcagattcg tgtgcacttt caatggttag gggcgccatt
     5881 agtgggcgat acattatatg gacaggcaca tcatacgtat caaacccaat tattaaaatg
     5941 tgcggaggtc aggtttgtcc atccattgac tcaggaacga ctgacaatca agagtgaaca
     6001 gcctcacttc gaacaattat taaccacttt gtagatttac aggaacgatg gaggtggcaa
     6061 acgtggtgaa cgacaatgaa caaatattgt tagatggcga agaaatgttc aacaaagctt
     6121 tgttagatga tttcatcgcg aaaggggata ttgacggctt tcgtgaagag tttttagcat
     6181 tgcactcata tgaacaaagt gaatatttcg aaataagtga cgatgatgtc cgtcaaaaaa
     6241 tgtatcgatt tttatctcca caagaagttt cggagttctt tgagaattta gagattgatg
     6301 aggaagatta cgaagcatta tttgaaacga tgaatgcgac ttatgcgagt caagtgctcg
     6361 agcagatgtc ttacgataat gcggtcgata ttttaaacca gctttccaaa aagaaaatcg
     6421 cgagtttatt aatgttgatg aaccgcgaag aagcaaaaga aattaaagca ttactccact
     6481 atgacgaaga tacagccggc ggtatcatga cgacggagta tatttcactc acgattaata
     6541 caccagtaca tgaagcgtta atgcgtgtga aagatcaagc gccagacgcc gaaacgattt
     6601 atgtgatttt cgtcgtggat gaagataaaa aactagttgg ggttatctca ttaagggatt
     6661 taattattgc cgaaaatgat gcgtacattg aagatattat gagtgaacgt gtcattagtg
     6721 ccaatgtcgc tgatgaccaa gaagatgttg cgcaaacaat gagagactat gactttatcg
     6781 cgatgccggt tgtagattac caaaatcatc tgttagggat tattacgatt gacgatatcg
     6841 tcgacgttat ggatgaagag gcgagcgaag actactcacg tttagccggg gtatcggata
     6901 tcgattcaac tgatgatacg atatttcaaa ccgctttaaa acgtttgccg tggttactca
     6961 ttttgactgt attaggtatg attacggcat ccattttagg ctcatttgaa gaaacgttag
     7021 aaaaagtggc gctattagct gcatttattc caattattag tgggatgtcc ggaaattcag
     7081 gcacccagtc gcttgccgtg tctgtccgca acatttcaac aggtgatatt aaagaaaaaa
     7141 gtaagattaa acttgcatta cgtgaatcag gcagtggctt tttgacaggg attacatgtg
     7201 cggtaagttt gagtttgatt attatgttgt tgtacggcca gccttacctt gcattgattg
     7261 tagggacaag tctgaccatc gcaatgacag tagggacaac gattggttct gtgattccac
     7321 ttgtgattaa tcgtttaggt attgaccctg ctgttgcgag tggtccgttt attacaacga
     7381 ttaatgatat tgtcagtatg ttgatttatt tcggattagc tacgactttt atgtcatatt
     7441 taacttgagg gggtacccat ggaatttgta tcgctagtcg tcgtcatagt agctgctatg
     7501 attacgccga ttttgattca taggttgaaa atatcgtttt tacctgttgt ggtcgccgaa
     7561 attttaatgg ggatcatcat cggaaattcg tttttaaacc tcgtacatcg tgacgaaatg
     7621 ttaaatattc tgtcgacgtt aggctttatc tttttaatgt ttttaagtgg cttggaaatt
     7681 gacttttcag catttaaaaa ggataaaggt aaagagaaaa aagatgagga acaacaaagt
     7741 ccaagtcatt ttaaactcgc attgagtgtg tttatgctga ttatgatttt gtctattata
     7801 cttgcatacg catttcaatg gatgggctta attgatgatg tgctgttaat ggtgattatc
     7861 atttcaacga tttcattagg tgtagttgtg ccgacattga aagaaatgaa cttaatgagt
     7921 acgacgattg gccaattaat tttgttagtc gcggtattag ccgaccttgc aacgatgctg
     7981 ttactcactg tctatggtgc gatacatgca tcagggggtg gcacgatttg gctgatcggt
     8041 attttagttg tctttacaat tgtgttctat ttcttaggtg gcttattcaa aaaagcacca
     8101 tttttagaaa agttaatggc tggaacgaca caaattggga ttcgggctgt attcgcactt
     8161 attattttac ttgttgcgtt agctgaaggt gtcggtgcgg aacatatttt aggtgccttt
     8221 ttagccggtg tggtcgtgtc attactcgga ccaacgcaag atttagttga aaaactcgac
     8281 tcatttggat atggcttctt catcccgata ttctttatta tggtcggtgt agatttggac
     8341 attccatcgt taattagcga ccctaaagta ttactcatta ttccagtgct catcattgcg
     8401 tttattattt ctaaattaat ccctgtcatg ctgctgaaaa aatggtttga tatgaagaca
     8461 acgattgcgt ctgcgttttt attaacatcg acactatcac tggtcattgc agcggccaaa
     8521 atcgctgaaa aacttggcac gatcagtgaa gaaatctcag gtattttaat tttgagtgcg
     8581 gtcattacat gtgtctttgt gccgattgtc tttaagaaat taattccgat tcctgatgaa
     8641 atgcaacgtt ccattaaagt agctatgatt ggaaaaaacc aattgtcgat tccgattgca
     8701 cagggattgc gttcgcagtt atacgagatt tcattgtact atcgaaagga cttatcagat
     8761 catcgcgtac tgtcagatga tattacgatg attgaaatta cagactacca ttcagatata
     8821 ttgaatcggt taggtttgta tgatagtgac attgtcgtat gttcaactaa cgatgatgaa
     8881 attaatcgtc gtgttgcatt aatggctaaa gcacacggtg tagaacgcgt gatttgccgt
     8941 ctcgaaacga atgacgaatc tcaggaactg agcagccaag gtatcgaatt gttcagtaat
     9001 ttccaaagta accaaatttt attaaaaggg atgattgaga caccaaacat gctgaactta
     9061 ttaagcaacg tcgaaacatc attgtacgaa attgggatgt acaattacgc tttcgaccat
     9121 atgcagctcc gtcatttccc atttggcggc gatattatct ttgtccgtat tattcgaaac
     9181 aatgaatcaa tcgtgcctca cggggataca caactccaat atggtgaccg tttgattgtg
     9241 acaggaacga aagaatacgt cgatcaattg aaaatagaat tagaaatgtt ttaactgaac
     9301 tcagacacag ttttgaaata tggatgttaa ctatttcaag gctgtgtttc tttcttcaaa
     9361 agggaaatac ttttcaaaat ttagtaccag atgttaatat taatataatc atgtcattaa
     9421 acgtaaagga gtaatctaca gtgatgaatc ttgaaggtaa aacttttgta attatgggta
     9481 ttgcaaacaa gcgtagtatt ggtttcggtg tagcaaaagt attagaccaa ttaggcgcaa
     9541 aattagtgtt tacatacaga aaagaaagaa gttttaatga attagataag cttatcgatc
     9601 aacttaatca atctgaaaag catgtatatc aaatcgatgt acaaagtgat gaagaggttg
     9661 tcaatggctt cgaaaaaatt ggtcaagcag ttggcaaaat tgatggtgta ttccattcta
     9721 ttgcatttgc acgtgttgaa gaactaagag gtcgtttctc agatacatca cgtgacggtt
     9781 ttttacttgc gcaagacatc agtgcgtatt cattaacgat tgttgcacgt gaagctcgta
     9841 aaattatgaa tgaagcgggg agtatcgtga catcatcata cattggtggc gaatttgcag
     9901 taccgaacta caatgtgatg ggtgtagcaa aagcaagtct tgaagcatct gtgaaatatt
     9961 tagcagcaga cttaggtcaa gataacattc gtgtgaattc gatttctgca ggacccatcc
    10021 gtacattaag tgcacgaggc gttggaggtt tcacgagcat cttaaaagaa attgaagaac
    10081 gcgcgccatt aagacgtaat gtcgatcaag aagaagtagg taaaacagca gcgtacttat
    10141 taagtgattt ctcttctggc gttacagggg aaaatattca tgttgacgca ggttaccacg
    10201 cgattcgata aaaccagtaa aacacgtaca ccctaagttc gttataaatc gaacttaggg
    10261 tgtacgtgtt ttattccatt ctgaaaatga ttgaattaaa ttggtagcta tatcaatttt
    10321 tttgagcttt ctcaagacaa ctgatactta tacattttaa cctccaagtt tagtgtaatg
    10381 gctttttcct cactatgaaa tagagcaaaa attactgaca atccaaaaaa aattaaactg
    10441 aaataatttt tcaatactat g
//
LOCUS       DANHPA010000085        10436 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.085, whole genome shotgun sequence.
ACCESSION   DANHPA010000085 DANHPA010000000
VERSION     DANHPA010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 10436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10436
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.085"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..771
                     /locus_tag="PTC28_001807"
     CDS             <1..771
                     /locus_tag="PTC28_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDK5717084.1"
                     /translation="LYRSIIALLLFLALLSLIYKKIDLKNINFLTVVSFGLCNFTISY
                     LLLYYGTFYSSAAIVTLIFSMKAIITPVFISVVFRTQVSKRIYFGGILGLLSVFIIIY
                     PDLHKLPSSFYIGVLFALLGTVVTSIGDVLSAYNSQKKTNPVIANVIGMSGAVIFLIV
                     YTYINGDSYSIPTEINFWFGLIYLAVFASFLAWLFYLKLISNIGASESGYMVAMFPAI
                     GGAASVFMGESQLNMNLLIGIVLACIGAYLALRKPNRA"
     gene            complement(1237..1866)
                     /locus_tag="PTC28_001808"
     CDS             complement(1237..1866)
                     /locus_tag="PTC28_001808"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HDK5717085.1"
                     /translation="MALKPDFSKGLLPVILQDADTKQVLMLGYMNEEAFQKTVEEEVA
                     WFYSRSKGRLWKKGESSGHIQKVKDMYLDCDQDTLLLFVEPMGPTCHTGAQSCFGTEG
                     GFKVQQLEETVATRAQEADSGSYTQYLLNEGKEKITKKFGEEAFEVVIAAMKDDRDEL
                     IAESADVLYHLFVLLQAQDVTFAEVEALLGERHEKRNNFKGERQDIEEW"
     gene            complement(1857..2621)
                     /gene="hisF"
                     /locus_tag="PTC28_001809"
     CDS             complement(1857..2621)
                     /gene="hisF"
                     /locus_tag="PTC28_001809"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000592599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDK5717086.1"
                     /translation="MIKKRIIPCLDVKDGRVVKGIQFKGLRDIGDPVDLAMYYNEAGA
                     DELVFLDISKTERGHALTLDIIQQTAEQLFIPLTVGGGIASLDDISDLLKHGADKVSL
                     NSAALNNPELIRQASEKFGRQCICIAIDSQYDPKLDDYFCCTHGGKKRTDKRVYDWVQ
                     EVESLGAGELLVTSMDFDGMKQGFDLKHLNGIAERVNIPIIASGGGGKARHFTELFTQ
                     TPVSAGLAASILHDKETTVHEIKQELENGGVPVRWP"
     gene            complement(2618..3322)
                     /locus_tag="PTC28_001810"
     CDS             complement(2618..3322)
                     /locus_tag="PTC28_001810"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-((5-
                     phosphoribosylamino)methylideneamino)imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HDK5717087.1"
                     /translation="MIKIWPAIDLIEGKSVRLTEGDYSTSEAMTRSAEDSIQFYNQFE
                     SVDRIHIIDLIGAKAQRAIEMDYIQQLIQASDKPIEVGGGIRDEATLRRYFDSGVDYC
                     IVGTQAITNTAWLSEMSQLFPGKIYVSVDAYHTAIKINGWTEDAALDLFDYVAQIETF
                     PLGGVIYTDISKDGKLAGPNFEITAQLAQATSLPVVASGGIRDRQDLERLEASGVTAA
                     IVGKAANQSTFWEGLS"
     gene            complement(3315..3890)
                     /gene="hisH"
                     /locus_tag="PTC28_001811"
     CDS             complement(3315..3890)
                     /gene="hisH"
                     /locus_tag="PTC28_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDK5717088.1"
                     /translation="MIVIVDYGLGNILNVQRAVQHLGYDVVVSRDPAVIERAEQLILP
                     GVGHFKDAMQAIDRYELAPLLKRQQKPIIGICLGMQLLYAFSDEGHVPGLGFFEGHVR
                     AIDTPYTVPHLGWNQLKSDVPSLDKDVYYVHTYQAPMNDDVVAYTDYGTQIPGIVQRG
                     PYIGIQFHPEKSGNYGLDILAQALKGGWQHD"
     gene            complement(3887..4468)
                     /gene="hisB"
                     /locus_tag="PTC28_001812"
     CDS             complement(3887..4468)
                     /gene="hisB"
                     /locus_tag="PTC28_001812"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HDK5717089.1"
                     /translation="MTYQINRETKETKIAIELSEAQETSHIDTGVGFLDHMLTLLSFH
                     SGLYFNIHVDGDTWVDDHHTTEDIGIVLGQLLLQLTRDKKHFERYGQQYLPMDETLAR
                     AVVDISGRPYLNFNASFSKEKVGQFDTELVEEFFRALVINARLTVHIDLLHQGNTHHE
                     IESVFKAFARALKQALRPSQEARIPSSKGVIES"
     gene            complement(4452..5465)
                     /locus_tag="PTC28_001813"
     CDS             complement(4452..5465)
                     /locus_tag="PTC28_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate aminotransferase family
                     protein"
                     /protein_id="HDK5717090.1"
                     /translation="MIRMNKNESPIKPLSTETLTKLIEKCDYHLYPDVAYDRFRKAYA
                     RYYGNTFTREQITCGNGSDELIQKLMLIMPDGPCLTLNPDFFMYQDYARQVNRDIQFV
                     DATPELSFPVEAVLDKIEAVQPSFFILSNPHNPTGHRFDESYLLAVANRMKQLGGYLV
                     IDEAYIDFSTPLDIALEDHILVMRTLSKAYAMAGLRLGVLIGTEKTIQLVRQIEHPYP
                     LSALTMAIGIQLFENQADTEAFIAHQRHLSSRLKAILQQHASPHMTIYPSETNFVLTA
                     GPQAMALGRHVEQHGFLPRFYNDPSEATMAGFVRYSIATEAQLDRFEQVVKEWSERHD
                     ISN"
     gene            complement(5462..6721)
                     /locus_tag="PTC28_001814"
     CDS             complement(5462..6721)
                     /locus_tag="PTC28_001814"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HDK5717091.1"
                     /translation="MIVNSQTFLQQFETTETFNPEIHAQVTAICERVRREGDLALHDY
                     NQQFDGIKVEALEVPQADIAAAYHNIDEDLRHALEHSFRRIRDYQTQIKYENQYATPE
                     LYEVYHPIERVGIYVPGGKASYPSTVLMTATLAKVAGVKNISVVTPPQQNGVAPSVLA
                     ACHIAGVDHVYQVGGAQSIAALAYGTETIPKVDKIVGPGNQYVAYAKKALYGEVGIDQ
                     IAGPSEIALIIDDTCNLEAVVYDVFAQAEHDEMARTFVISTDLALLESLESRIQQTLN
                     GAPRHDILKVSLKDNHYLIHATDFEDSCHVMNTIAPEHASIQTAQPENYLPHIHYVGS
                     LFLGGYAPEAIGDYIAGPSHVLPTQRTARFQHGLSVNDFLTKHTVIHLSEATYEKTYR
                     DAARIAQDEQLYHHQKSLEIRQRGDNA"
     gene            complement(6711..7325)
                     /locus_tag="PTC28_001815"
     CDS             complement(6711..7325)
                     /locus_tag="PTC28_001815"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HDK5717092.1"
                     /translation="MLTIALAKGRLLKSFIAYLESQGQNDLAAQLKSRERQLQIKVSP
                     FHFLFVKGNDVPIYVEQGIADIGITGSDILNEAQYDVNQLLALPFGQCHFSVAAFDET
                     TDYHKVATSFPKTARDYFKATGRDVELIELSGSIELACVIGMVDGIVDIVQTGTTLRS
                     NGLVEKEHITDIQAQLITNRQSFFTQSSEIDAFINMLGVSLIDR"
     gene            complement(7341..8150)
                     /locus_tag="PTC28_001816"
     CDS             complement(7341..8150)
                     /locus_tag="PTC28_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HDK5717093.1"
                     /translation="MGQPFIQNKQYEIDFLKLATANDFEPIETAFIETLVWDELSPDD
                     LKQMKERSVWQADDTLFALRNDFTDQLVRYYQHYQLNHSAVAYTGPIVRHHQVQTQLG
                     LECYRPHIQEMYHAFETFQQFISQHLQDEIQYVVIGHYQLIDLLLEHQAEREQLLTWV
                     EQRNISALKSELGMSHPLVRLLLTPTHQQLELLNTLYPHDHVIIRSLNRWQTYFKSLH
                     IDTIHLDITPQAPRSYYKETFIHAHLQNSGRTLSGGYYNGPLEGFGLGLTL"
     gene            8481..9143
                     /gene="deoC"
                     /locus_tag="PTC28_001817"
     CDS             8481..9143
                     /gene="deoC"
                     /locus_tag="PTC28_001817"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HDK5717094.1"
                     /translation="MNFEKYIDHTLLKPESTRAQIDKIIEEAKAYHFKSICINPTHIA
                     YAAEKLADSDVLVCTVIGFPLGANTTETKVFETEDAIRKGADEIDMVINIGALKDQRY
                     DDVQKDIEAVVKAAEGKTVKVIIETALLTEEEKVKASELTKAAGAHFVKTSTGFSTGG
                     ATPEDVKLMKDTVGESVEVKAAGGVRNLEDFKAMIDAGATRIGASAGVQIMQGLEVDS
                     DY"
     gene            9177..10355
                     /gene="deoB"
                     /locus_tag="PTC28_001818"
     CDS             9177..10355
                     /gene="deoB"
                     /locus_tag="PTC28_001818"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HDK5717095.1"
                     /translation="MTVPFQRVHLIVMDSVGIGEGPDAKDFNDEGSHTLKHTLEGFDQ
                     KLPNLEKLGLGNIAPLPVIDAVDHPLAYYTKLSEASVGKDTMTGHWEIMGLNIMQPFK
                     VYPEGFPEELVQEIEQLSGRKVVANRPASGTQIIDEWGEHQMKTGDLIVYTSADPVLQ
                     IAAHEDVIPLEELYDICEKVRELTKDPKYLIGRIIARPYVGEPGNFTRTSNRHDYALK
                     PFGKTVMNTLKENDYDVIAIGKINDIYDGEGVTEAVRTKSNMDGMDQLMNIVNKDFKG
                     LSFLNLVDFDALYGHRRDKPGYAQAIKEFDNRLPELMDALHEDDLLIITADHGNDPTA
                     PGTDHTREYIPVIMYSPKFKGGQALEGDTTFSSIGATIADNFGVTLPEFGRSYLNELK
                     "
BASE COUNT         2980 a         2057 c         2209 g         3190 t
ORIGIN      
        1 ctttatagat ctattatagc attactacta tttttagctt tactatcttt aatatacaaa
       61 aaaattgatt taaaaaacat aaactttttg actgttgtga gtttcggttt gtgtaacttt
      121 actataagtt atttgctctt gtattatgga acattttata gttctgcagc tatagtaaca
      181 ttaatatttt ctatgaaagc aataataact cctgttttta ttagtgtcgt atttcggaca
      241 caagtatcta aaagaattta ttttggtgga atactagggc tattaagtgt atttataata
      301 atatatcctg atttgcataa gttgccgtct agtttttata taggcgtttt atttgctttg
      361 ttaggtacag ttgtaacttc gataggggat gtcctatcag cttacaatag tcaaaagaag
      421 actaatccgg ttatagctaa tgtaattggc atgtcaggag cggttatctt tttaattgtt
      481 tatacgtata tcaatggcga cagttactca atacccactg aaataaattt ttggtttgga
      541 ttaatatatt tagcagtgtt tgcatcattc ttagcgtggt tattttactt gaaattaata
      601 agtaatatag gggcctctga aagcggatat atggttgcaa tgttccctgc tattggaggt
      661 gcagcaagcg tatttatggg agaatctcag ttgaatatga atttattgat aggtatagtt
      721 cttgcgtgta taggagcata tttggcactt cgtaagccta acagagctta attactatac
      781 tgattttcat atttttggtc gtcgcttata ttaggtggcg actttattat ataagaggtc
      841 tggggaaaag acttatatat tgtagtgaaa aataagatat aaatgtctat tcattaaatc
      901 aaagtaggta ttttttgaaa aggggatgat gcgattgaac gtgagcgaga ctcctgaggg
      961 atagatgata tctgaagtca ttgtttttca ttttgatagt ggtgactgtt taacacagtg
     1021 gctgtctgac ttctcaatga tgatgctttt gagaagacta gttagccttg cgggagcagt
     1081 acagaaatct tatgtgtaac aaagatttct gtactgctcc cgaaaatcca ctactttttt
     1141 ataacatttc aatcaagcag aattgagttg aggtttcagt gactcggaaa gcgcagaatg
     1201 gttcagcaat ctgaatgtta cgacaatgta cgcaacctac cattcttcaa tatcttgacg
     1261 ttcaccttta aaattattac gtttctcatg ccgttccccc aacaacgctt ccacttctgc
     1321 aaatgtcaca tcttgcgctt gaagtaatac gaacaagtga tacaatacat ccgcactttc
     1381 cgcaatcaat tcatcacgat catctttcat cgccgcaatc acgacttcaa atgcttcttc
     1441 accaaacttc ttcgtaattt tctctttacc ttcattgagt aagtactgtg tatacgagcc
     1501 actatctgct tcctgtgcac gtgttgcaac cgtttcttca agttgttgca ctttaaagcc
     1561 accttctgtt ccaaaacaac tctgtgcacc ggtgtggcat gttgggccca tcggttcgac
     1621 aaacagcaat aatgtatctt gatcgcaatc taaatacata tctttaactt tttgaatgtg
     1681 tcctgaagat tcgccttttt tccatagacg acctttggag cgcgaataaa accaagcgac
     1741 ttcttcttct accgtttttt ggaacgcttc ttcattcata taacctaaca tcaacacttg
     1801 ttttgtatcg gcatcttgta aaatgacagg gagtaatcct tttgaaaaat ctggttttaa
     1861 ggccatctga caggcacacc tccattttcg agttcttgtt tgatttcgtg aacagtcgtt
     1921 tctttgtcgt gtaatatact tgccgcaagt cctgctgaga caggggtttg tgtgaaaagt
     1981 tcggtaaagt gacgtgcctt gccaccaccc cccgacgcaa taattggaat attgacgcgt
     2041 tcagcaatcc cattcaaatg tttaaggtca aagccttgtt tcatcccatc aaaatccata
     2101 cttgtgacga gaagctcacc agccccgagt gattcgactt cttggaccca atcatacacc
     2161 cgtttatcag tgcgtttttt accgccgtgt gtgcaacaga aataatcatc taactttgga
     2221 tcatattgac tgtcgatggc gatacaaatg cattgtcgtc caaacttttc gctcgcttga
     2281 cggatgagtt cagggttatt gagtgctgct gaattaagtg atactttgtc ggcaccatgc
     2341 tttaacaaat cagaaatgtc atcgagtgaa gcaataccgc ccccgaccgt taatgggata
     2401 aacagttgct cggcagtttg ttggataatg tctaacgtta aagcatggcc ccgctcagtt
     2461 ttggaaatat ctaaaaagac gagttcatcg gcaccggctt cgttatagta catggctaga
     2521 tcaacggggt caccgatgtc ccttaaacct ttaaattgaa tgccttttac gacgcggcca
     2581 tctttcacat cgaggcaagg aatgattcgt tttttaatca acttaatccc tcccaaaatg
     2641 tgctttgatt tgcagcttta ccgacaattg cagcagtaac acctgaagct tcaagtcttt
     2701 caagatcttg tcgatcacga atgcctcctg atgcgacgac aggtaacgat gtcgcttgtg
     2761 caagttgagc ggtgatttca aagttcggac ctgctaattt accatctttc gaaatatctg
     2821 tgtaaataac gccacctaac gggaatgtct cgatttgagc gacgtagtca aataagtcta
     2881 acgcagcatc ttctgtccaa ccgttaattt tgattgctgt gtgatatgca tcgacggata
     2941 cataaatttt cccaggaaat aactgactca tttcagagag ccatgctgta ttcgtaattg
     3001 cttgtgtgcc gacaatacag taatcgacac ctgaatcaaa atagcgtcgc aacgtagcct
     3061 catcacgaat gccacctccg acttcaattg gtttatcact cgcttgaatg agttgttgaa
     3121 tataatccat ttcaattgcg cgttgtgctt tggcgccgat gaggtcgata atgtgaatgc
     3181 ggtcgacact ttcgaattga ttgtaaaatt gaatactgtc ttctgcgctt ctcgtcatcg
     3241 cctctgaagt gctgtaatct ccctcggtca agcgcacact tttaccttca attaaatcaa
     3301 tggcaggcca aattttaatc atgttgccat cctcctttta atgcttgtgc taagatgtcc
     3361 aagccataat tcccactttt ttcagggtga aattgaatgc cgatatatgg accgcgttgg
     3421 acgataccag gaatttgagt gccgtaatct gtataggcga caacatcgtc attcatcggc
     3481 gcttggtacg tatgcacata atagacgtct ttatctaaac tcgggacgtc gctttttaac
     3541 tgattccaac cgagatgcgg cactgtgtaa ggtgtgtcaa tcgcacgaac atgaccttcg
     3601 aaaaagccga gcccagggac atgaccttca tcgctaaaag catagagcaa ttgcatcccg
     3661 agacagatac caataatggg cttttgttgt cgtttcaata atggtgccag ttcataacgg
     3721 tcaatggctt gcatggcgtc tttaaaatga ccgacccctg gtaaaatgag ctgttcggca
     3781 cgttcaatga ctgcaggatc acgtgagacg acgacatcat agccgagatg ttgtacggca
     3841 cgttggacat ttaaaatatt gcctaatccg taatctacaa tgacaatcat gattcaatca
     3901 cacctttaga cgaagggata cgtgcttctt gtgatgggcg caatgcttgt tttaaggcgc
     3961 gggcgaacgc tttgaatact gattcaatct catggtgtgt attgccttgg tgcagtaaat
     4021 cgatgtgtac cgtgagtcgc gcattgatga ctaacgctct aaaaaattct tcaactaact
     4081 ctgtatcaaa ctgcccgacc ttttctttac tgaatgacgc attaaagttt aaataaggac
     4141 gtccactaat atcgacaaca gcacgggcta atgtttcatc cattggtaaa tattgttggc
     4201 cgtaacgctc gaaatgtttt ttatcgcgcg tcagttgtaa caataattga ccgagtacga
     4261 taccgatatc ttcagttgta tggtgatcat ccacccacgt atcaccatcg acatgaatat
     4321 tgaagtacag gccactgtga aagctgagta gtgtcaacat atgatctaaa aagccgacac
     4381 ctgtatcgat atgacttgtt tcttgcgctt ctgaaagttc aatggcaatt ttagtttctt
     4441 tcgtttcacg gttaatttga tatgtcatga cgttcactcc attctttgac gacttgttca
     4501 aaacggtcta gctgggcttc tgtcgcaatg gaatagcgga caaatcctgc catcgttgct
     4561 tcagatgggt cattgtaaaa acgtgggaga aagccgtgtt gttccacatg gcgtccgagt
     4621 gccattgctt gaggtccagc agttagcaca aagttggtct cactcggata aatcgtcata
     4681 tgtggactgg catgttgttg taatatagct ttcaaccgtg agcttaaatg acgttggtgt
     4741 gcaatgaatg cttcagtgtc tgcttggttt tcgaatagtt gaataccgat tgccattgtg
     4801 agcgcactga gcgggtaagg gtgttcaatt tgtcgaacaa gttgaatcgt tttttctgtg
     4861 ccaattaaca caccgagacg caacccagcc atcgcataag ctttcgacaa tgtgcgcatg
     4921 accaaaatgt gatcttctaa cgcaatatcg agcggtgttg aaaaatcaat atacgcttca
     4981 tcaatgacga gatagcctcc gagttgtttc atgcgattgg caacggccag caaataactt
     5041 tcatcaaaac ggtgaccagt cggattgtgt ggattactta atatgaagaa actcggctgt
     5101 accgcttcaa tcttgtccaa tacggcttca actggaaaag ataactctgg tgtagcatcc
     5161 acaaattgaa tatcgcggtt cacttggcgc gcgtaatctt gatacatgaa aaagtcgggg
     5221 ttgagcgtta aacatggtcc atctggcatg atgagcatta acttttgaat cagttcatca
     5281 gagccattgc cacaagtgat ttgttcgcgt gtgaaagtat taccatagta tcgcgcataa
     5341 gctttacgaa aacgatcata cgccacgtca ggatagaggt gatagtcaca cttttcgatg
     5401 agtttggtta atgtttctgt cgatagtggt ttgatcggac tttcattttt gttcatacga
     5461 atcatgcgtt gtcacctctt tgtctaattt ctaatgattt ttggtggtga tacagttgtt
     5521 catcttgagc gatacgtgct gcatctcgat acgttttttc ataggttgct tctgataagt
     5581 gaatcaccgt atgttttgtt aaaaagtcat tgaccgataa accgtgttga aagcgggctg
     5641 tccgttgtgt aggtagaacg tggcttggtc ccgcaatata gtctccaatc gcttccggcg
     5701 catagccacc taagaatagg ctgccgacat agtgaatatg tggcaaatag ttttcaggct
     5761 gcgcggtttg aattgatgca tgctctggtg caatagtatt catcacgtga caactgtctt
     5821 caaaatcagt cgcgtgaatg agatagtgat tatctttcaa actgactttt aaaatgtcat
     5881 gacgtggtgc accgttaagt gtttgttgga tacggctttc taaactttcg agcaatgcca
     5941 aatctgttga aatgacaaat gtccgcgcca tttcatcatg ttctgcttga gcaaatacat
     6001 catagacaac tgcttctaag ttacatgtat catcaattat caatgcaatt tcactgggtc
     6061 ccgcaatttg atcgataccg acttcgccat acaatgcttt tttcgcatag gcgacatatt
     6121 gattacctgg accgacaatt ttatcgactt tcgggatggt ttctgtacca taagcgagtg
     6181 ctgcaatact ttgtgcaccg ccgacttgat acacatgatc cacaccagca atatgacatg
     6241 ctgcgagtac actcggtgca acaccattct gctgaggcgg cgtgacgaca ctgatgtttt
     6301 tcacaccggc tactttcgcg agtgtggccg tcattaatac agtggaaggg tagctcgctt
     6361 taccgcctgg cacatatata ccgacacgtt caatcgggtg atacacttca taaagttcag
     6421 gtgtcgcgta ttggttttcg tatttgattt gtgtttgata atcgcgaatt cttcggaaac
     6481 tatgctcaag tgcgtgacgt aaatcttcat ctatattgtg gtacgctgct gcaatgtcag
     6541 cttgtggcac ttccaacgcc tccaccttga tgccatcaaa ttgttgatta tagtcatgta
     6601 atgctaggtc tccttcacgt cgcacgcgtt cacaaatggc agtgacttgt gcgtgaattt
     6661 caggattgaa tgtttctgtt gtttcgaatt gttgtaaaaa ggtttggcta ttaacgatca
     6721 atgagcgaca ctcctaacat gttaataaat gcatcaattt ctgatgattg ggtgaaaaag
     6781 ctttgtcgat tcgtaatgag ttgcgcttga atatctgtaa tatgttcttt ttcgactaac
     6841 ccgttcgaac gcaatgtcgt ccctgtttga acaatgtcaa cgatgccgtc gaccatgcca
     6901 atcacacaag caagttcgat agagccggat aattcgatca gttcgacatc acgtcctgtc
     6961 gctttaaaat aatctcttgc tgttttagga aaagaagttg cgactttgtg atagtccgtt
     7021 gtctcgtcaa atgctgcgac tgaaaagtga cattggccaa aaggaagtgc aagcagttga
     7081 ttgacgtcgt attgagcttc attgagaata tcactgcctg taatgccaat atcagcaatg
     7141 ccttgttcga catagatagg gacgtcattg cctttgacga ataaaaaatg gaaaggcgat
     7201 actttaattt gaagctggcg ttctctagac tttaattgtg ctgccaaatc gttttgacct
     7261 tgtgattcta aataggcgat aaaacttttg agcaggcgac ctttagctaa tgcgatcgta
     7321 agcacagtga ttcctcctcg ttataatgtt aaccctaaac cgaaaccctc tagcggcccg
     7381 ttataatagc ctcctgatag cgttcgacca ctgttttgaa ggtgtgcatg aataaacgtc
     7441 tccttatagt atgaacgtgg agcttgcggt gtaatatcca gatgaatcgt gtcgatgtga
     7501 agcgatttga agtatgtttg ccaacgattc aaactgcgaa taatgacgtg atcatgtgga
     7561 tataacgtat ttaaaagttc cagttgctga tgtgtcggtg tgagtaataa tcgtacgagc
     7621 ggatgactca tgccaagctc ggatttgagt gccgaaatat tacgctgttc aacccatgtc
     7681 agtagctgtt cacgttcagc ttgatgctca agcaataaat cgatgagctg gtaatgccca
     7741 atcacgacat attgaatttc atcttgtaag tgttgcgaga taaattgttg gaacgtctca
     7801 aaagcatggt acatttcttg aatatgtggg cgataacatt ccagaccaag ttgtgtttgg
     7861 acttgatggt gtcgcacaat cggccccgta taagccacag cggaatgatt aagttgataa
     7921 tgttgataat agcgcacaag ttgatcggtg aaatcattgc gtaaagcaaa caaagtatca
     7981 tctgcctgcc acacactgcg ctctttcatt tgttttaaat catctggaga cagttcatcc
     8041 cacacgagtg tttcgataaa agcagtctca attggttcga aatcattggc tgttgctaac
     8101 tttaaaaagt caatttcata ttgtttattt tgtatgaaag gttgtcccat tatccaccct
     8161 cgctttcgtt ctctaccaag ttaaagtatt tgaatagaat atgacaatgg tagcacagag
     8221 attttcagat ttcaacacat ttttctgaat attttatttt tagtttcggc tacttgccgt
     8281 catcatcatc agactgtctc aaaattgttc gatttgtaca cggcaatatg ccatgccata
     8341 atggttcaag cacgagcatg cgttgcacat attcattacc aatttatcgc aatcgactca
     8401 aaataaaaaa atcgtatttt gaagcatcta attgtataat tgagagggtc aagaaattat
     8461 atcaataagg agcgttccgt atgaatttcg aaaaatatat tgatcacacg ttgttaaaac
     8521 cagaatcaac acgtgcacaa attgacaaaa ttattgagga agcaaaagca tatcatttca
     8581 aatcgatttg tattaatcca acacacatcg cttatgctgc agaaaaatta gcagattcag
     8641 atgtgctcgt atgtacagtg atcggtttcc cattaggagc gaacacgacg gaaacaaaag
     8701 tatttgaaac agaagatgcg atccgtaaag gcgcagatga gattgacatg gtgatcaaca
     8761 ttggtgcatt aaaagaccaa cgttatgatg acgtgcaaaa agatattgaa gcggtcgtta
     8821 aagctgcaga aggtaaaaca gttaaggtca ttatcgaaac agcactttta actgaagaag
     8881 aaaaagtaaa agcatctgaa ctaactaaag cagcaggtgc ccatttcgtg aaaacatcaa
     8941 caggcttctc tacgggtggt gctacacctg aagacgtgaa gttaatgaaa gatacagtcg
     9001 gcgaatcagt agaagtgaaa gcagctggtg gcgtacgtaa cttagaagac ttcaaagcaa
     9061 tgattgatgc aggtgcaaca cgtatcggtg caagtgccgg cgtacaaatt atgcaaggtt
     9121 tagaagtaga ttcagattat taatcaaaga attcaataaa tgtgggagtg attaagatga
     9181 cagtaccttt tcaacgcgtt catttaattg tgatggattc agttgggatt ggagagggcc
     9241 cagacgctaa agactttaac gatgaaggct cacacacttt aaaacatacg cttgaaggat
     9301 ttgatcaaaa gttaccgaac cttgaaaaat taggcttagg gaatattgcg ccattaccag
     9361 tgattgacgc tgttgatcat cctttagcgt attatacaaa attaagtgaa gcgtcagtcg
     9421 gtaaagacac gatgacaggc cactgggaaa ttatgggctt gaacattatg caaccgttca
     9481 aagtgtatcc agaaggtttt ccagaagagt tagttcaaga aatcgaacaa ctttcaggcc
     9541 gtaaagttgt cgcaaaccgc ccagcatcgg ggacacaaat tattgacgag tggggcgaac
     9601 atcaaatgaa gacaggagac ttaatcgtct atacttctgc tgaccctgtg cttcaaattg
     9661 ctgcacacga agatgtcatt ccgttagaag agttgtatga catttgtgaa aaagtccgtg
     9721 aactgacaaa agatccgaaa tatttaattg gacgtatcat tgcgcgtcca tatgttggcg
     9781 aacccggtaa cttcacacgt acaagcaacc gtcatgatta tgccttgaag ccatttggta
     9841 aaacagtgat gaatacgtta aaagaaaatg actatgatgt cattgcgatt ggtaaaatta
     9901 acgatattta tgatggtgaa ggtgtaactg aagccgtacg tacgaaaagt aatatggatg
     9961 gcatggatca attaatgaat atcgtcaaca aagactttaa aggattaagc tttttaaact
    10021 tagttgactt tgatgcatta tatggccacc gtcgtgataa gccaggctat gcacaagcga
    10081 ttaaagaatt tgataatcgc ttaccagaat tgatggatgc attgcatgaa gacgatttat
    10141 tgattattac agcggaccac gggaatgacc caacagcacc ggggacagat catacacgtg
    10201 agtacattcc agtcatcatg tatagtccga agtttaaagg cggacaagca ttagaaggcg
    10261 atacaacatt tagttcaatc ggtgcaacaa ttgccgataa ctttggcgta acattgcctg
    10321 agtttggacg tagctattta aatgaattga aataattgag agaagtggct gatacctgta
    10381 aataggtgtc ggctgctttt ttattttggg gtcatcacta gtttttgact gtcgaa
//
LOCUS       DANHPA010000086        10258 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.086, whole genome shotgun sequence.
ACCESSION   DANHPA010000086 DANHPA010000000
VERSION     DANHPA010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 10258)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10258)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10258
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.086"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            5..727
                     /locus_tag="PTC28_001819"
     CDS             5..727
                     /locus_tag="PTC28_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HDK5717096.1"
                     /translation="MVTVGISANISYDTGGMFPGYERCYVNQDYIHTIVKHHAIPLVL
                     PIHTSQEMISQQIAHIDGLILTGGDDISPSLYQQDPYEKLGRTLLTRDLFDFKLLEVA
                     KRKGMPILGICRGAQIINVYHGGSLYQDLSYREAHTLRHHQKHIPTETTHTIHIEPNS
                     RLADAFETSQIMVNSFHHQTIQTLAPEFKAIAHATDGVIEAIEATNYPYLIGIQWHPE
                     MFWRESLMDRLFSDFIKICESK"
     gene            733..2118
                     /locus_tag="PTC28_001820"
     CDS             733..2118
                     /locus_tag="PTC28_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HDK5717097.1"
                     /translation="MKKLGFWSIVLLSINSIIGSGIFLTPGSVIRISGIYTPLIYVMA
                     AIFASILALTFASASKYVNKSGAAYSYTMVALGPHIGFYVGITRFIAGSIAWGVMATA
                     VVKTVITIFGGDHTDARLITLGFILLMGILLLINVLGKHLLVWVSNLSTIGKIAALLT
                     VIISGLYLVIQTGDTQFSRISTLVDTSQIDSQAFVMAIIAAFYAFTGFESIATGAQDM
                     KSPEKNLPRAIPLAIFMIAFIYIGVISITMTINPVALIQTKEVVSLVAVFDTPVIHRI
                     ILYGSLISMFGINVAASFSTPRIIEAIAHEGQIPKWFKKRTVYDFPLPAFMLTFLIAI
                     AIPLAFQYNLTSIILLSSISRFIQYLIVPICVILFYYGKTSAPTLNHIRKNFFTDVLL
                     PIFSFVLTLVLLIKFNWKGQFLITNDAVTSFNYLGVASLVLSYVIFPIILYRLTPLSK
                     KESTQIPRKMT"
     gene            complement(2362..4416)
                     /locus_tag="PTC28_001821"
     CDS             complement(2362..4416)
                     /locus_tag="PTC28_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614887.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HDK5717098.1"
                     /translation="MNQYNQKSIYRIRKYTVGVVSVLATMTFLIGGHDAMASEQHTTQ
                     ASSELARTEVTVSNQSLSEDTHTQSLSQKEGQHSHSGDSKNPKTSLFANASSQEQLPT
                     TPEQGVSSDNPNTSHPTHINENTNVPSLVDIQQEKGEKLSDVPNSEKVKTQSGSQIEA
                     PPHSNSRKAGRIAENQDLTSQQSDVALKDQSDVEVSKRVNHRSSEAMRARNVEKAQTD
                     EIDQMTSQNLKPVVKDKTDQGKEQAIAEHKDQTKKGASEEEMTQKETTQEQQSQTRVA
                     NSKEVLEKSSTQAQQKQSTNKYPIVLVHGFLGLVGENAPALYPNYWGGNKFKVIEALR
                     KKGYDIHQASVGAFSSNYARAVDLYYFIKGGRVDYGAAHAAQYGHERFGKIYKGIMPD
                     WRPGKKVHLIGHSMGGQTVRLMEELLRNGSKDEIAYHQKHGGTISPLFKGGLTDMVSS
                     ITTLGTPHNGSQAADQVANKEFVRHIMYALSRVAGSEYSDFDLGLRHWGFKQRPGESY
                     FDYMKRVSESPIWQTKDNAAYDLTLEGSAILNQKTSLNPNITYTTYTAEASHKGASGK
                     EVPNVGVFPLMDLTSRIIGSDARLEWRKNDGVVAVISSLFPLNQPFVKVSSDALATRR
                     GIWQVRPVLKNWDHVDFIGIDIFDLKRTGGELAKFYMSIMDNLLHIEALDMAAHIKKS
                     AS"
     gene            complement(5076..7028)
                     /locus_tag="PTC28_001822"
     CDS             complement(5076..7028)
                     /locus_tag="PTC28_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614888.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HDK5717099.1"
                     /translation="MLRTNYKLRKLKVGLVSTGVALTFVMASGNAEASENEQTEVKGE
                     AQVASVNEKESEAELPVAQQEASIQLDKVQPGDAQLSGYTQPNKAISVKIDNKDIVSV
                     DDGYEEVLSDDTGKFVYDLKGRQIVYNQKVDVEAMTPFNFEDFDESALESEEALEALG
                     QLEDEETATASVTTPRYEGAYTVPEERLTPIQGQQQVFIEPILEGASKIKGHTSVQGK
                     VALAINQEHVHLGDTLEEQAALTGQEWQGRYDGIWRHIDDQGFFEFDLNRLYNKSYPL
                     KSGDLVTLSFKSNDEVGPLFNVNVEPFERVAQAKTKYEQNDSPVVNKLDDTKSDLEVQ
                     PIYGDLTQAAVHGESKVLIPGTSKVEGRTNYAHAWIEMASNLGEYRSFPTLQADATGA
                     FIFDLKAADIQLLNGERLTFRAVDPHTKQQLAETTSEVRPVDMQDEESEVVQTSSTEK
                     SALADEILRSMTIDKSFNPEVTEIPGHVYPKKTEDKGPENTEQASENSEKPSQTTESQ
                     NDAVQDVEKSSVNEEVTPPSTESAQVEKGQNTEGALLPKNVEQHVESIPYQKRKALIG
                     LTKHQGSGHMPPFSLSFNNKEDDVSTKVNEANEHERKQGTVYPEQIEQLPQTGLTEKS
                     PFWALLFVVSGTGLLLFKRSRRQRQS"
     gene            8043..8873
                     /locus_tag="PTC28_001823"
     CDS             8043..8873
                     /locus_tag="PTC28_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HDK5717100.1"
                     /translation="MTDTDKNKSAKHTSQTHQEEKDKKQKNEEKDKDRDKKGKKDDGS
                     NSTSSEKESQSEHQSNHENKQSTSENLIAALFVKHIDGDTSKFNIDGKIKTVRYLLID
                     TPETKHPRLGVQPFGKEASNRTKSLLSSATKIEIEYDVGPKTDKYGRDLAYVFVDGKL
                     VNEILVREGLAKVAYVYPPNTKYLERLQAAEALAKQERLGIWSEQTDTVAQDTASVNT
                     AYTAPQQSAPNQNVAPQQTWFKNCTELNKVYPGGVPLGHPAYQRRLDRNHDGHACEAH
                     "
     gene            9283..10197
                     /locus_tag="PTC28_001824"
     CDS             9283..10197
                     /locus_tag="PTC28_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001239269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDT family transporter"
                     /protein_id="HDK5717101.1"
                     /translation="MKLQKAPLATSGLILGLLGLGNLLKDISLILNAICGILAILIWL
                     HLLYSMFHNFNHVKDQLNNPLVASVFTTFFMSGFLVTTYLNTFFSNVTVINQFIIPLW
                     VVCLIGMLLHMTIFSMKYLKRFTLENVYPSWTVLYIGIAIAGLTAPVSGYYIIGKASV
                     IYGFLATCIVLPIVFKRLKAYPLQRSIKPNTSTICAPFSLVAAAYVLTFPNANSYIII
                     IFLVLSQFFYFYIVLQLPQLLKAPFSPVFSAFTFPLVISATALKNSMSVLAFPEIWEW
                     LLLFEMLLATLIVFRVLLGYMHFFLKQA"
BASE COUNT         2949 a         2068 c         1681 g         3560 t
ORIGIN      
        1 aaaattggtc acagtaggta tatcagctaa catttcatac gatacgggag gaatgtttcc
       61 cggatatgaa cgttgctacg tcaatcaaga ttatattcat accattgtta agcatcatgc
      121 cataccctta gttttaccga ttcacacttc acaagaaatg atttcacaac agattgcaca
      181 tatagatggt ttaatcttaa ctggtggtga tgatattagc ccatctctat accaacaaga
      241 tccttatgag aagcttggca gaacgctttt aacacgtgat ttatttgact ttaagttgct
      301 tgaagttgct aagcgtaaag gtatgccaat tttaggtatt tgtcgtggtg cacaaatcat
      361 taatgtttac catggaggaa gcttatatca agatttatcc tatcgtgaag cacatacgtt
      421 acgccatcat caaaaacaca tccctactga aacgacgcat accatccata tcgaacccaa
      481 ttctcgactc gctgatgcat ttgaaacttc tcagatcatg gttaactcat ttcatcatca
      541 aactattcaa acactcgccc ccgaatttaa ggccattgcc catgcaactg atggggttat
      601 tgaagctatt gaagctacaa actatcctta tttaatcggt attcaatggc accctgaaat
      661 gttttggaga gaaagtttga tggatcgact gttttcagat tttattaaaa tatgtgaaag
      721 taagtgatat gtatgaaaaa attaggcttc tggtctatcg tattattatc tatcaattca
      781 attatcggtt ctggtatctt tttaactccc ggatcagtca ttcgaatatc agggatctat
      841 acgccactga tatatgtcat ggctgctata tttgctagta ttttagcgct cacttttgca
      901 tctgcttcaa aatatgtaaa taaaagtggc gctgcctatt cttatacaat ggtggcttta
      961 ggtcctcata tcggatttta tgtagggatt acgcgtttta ttgctgggag tattgcatgg
     1021 ggagtcatgg cgacagctgt cgttaaaact gtcatcacta tttttggtgg ggatcatacg
     1081 gatgcacgtc ttatcacgtt gggctttatt ttgctaatgg gaattttgtt actcattaat
     1141 gtactcggca aacacctttt agtctgggtc agcaacctct ccacgattgg aaaaatagct
     1201 gctttactta ccgttatcat atcaggtctc tatttagtta ttcaaacagg tgatacccag
     1261 tttagtcgta tcagtacact tgtcgacact tctcaaatcg attcacaagc atttgttatg
     1321 gccatcatag ccgctttcta tgcttttaca ggatttgaaa gtattgctac gggcgcacaa
     1381 gatatgaaat ctccagaaaa aaacttaccc agagccattc cgcttgctat tttcatgatt
     1441 gcattcattt atattggggt tatttccatc actatgacta tcaatccagt ggcgctcatt
     1501 caaaccaaag aagttgtctc attggtggcc gtatttgata cacctgttat ccatcgtatc
     1561 attttgtatg gaagcttaat atccatgttt ggtattaatg tcgctgcttc tttttcaacg
     1621 ccaagaatta ttgaagctat cgcccatgaa ggccaaatcc cgaaatggtt taaaaaacgt
     1681 actgtctatg attttccgct tcctgcattt atgctgacat tcttaatcgc tattgctata
     1741 cctttggctt ttcaatataa cttgacaagt atcattcttt taagttcaat ttctaggttc
     1801 attcaatatt taatcgttcc aatctgtgtt attttatttt actacggcaa aacgagtgca
     1861 cctacactaa atcatattcg taaaaatttc tttacggatg tattgttacc tatattttct
     1921 tttgtattga cactcgtttt acttataaaa ttcaattgga aagggcagtt tcttattaca
     1981 aacgacgctg taacatcttt taactatttg ggtgttgcct cattagtttt gagttacgtc
     2041 attttcccaa taatacttta tcgtttgaca cctctaagta aaaaagagtc gactcaaata
     2101 ccacgtaaga tgacctaaaa tggacgattg aaaaatataa ggagtgggac gaaaaaactt
     2161 cattaattat cgctttaacg taccactcct tctcatgcta tacatcacaa gcgcacgtct
     2221 ctaactgtca ttccgcttca tcaagcagta gtgacttatt cgtcatttaa tcgatgcaga
     2281 tgtttttgtt tactccatta aaacttttaa agtgaacgcg atatgtgacg atattcggtt
     2341 actcaaacct aatacaatgg attaagatgc agattttttt atatgagcgg ccatatctaa
     2401 cgcttcaata tgcaataaat tatccatgat actcatataa aatttcgcta gttctccacc
     2461 tgttcgcttt aaatcgaaaa tatcaatacc aataaaatca acatggtccc aattttttaa
     2521 aacaggtctg acctgccaaa tccctctacg ggtcgctaaa gcatcagatg agaccttaac
     2581 aaaaggttgg tttaatggaa atagtgatga aataactgca acaaccccat catttttacg
     2641 ccactctaac ctagcatcac tgccaataat gcgactcgtt aaatccatta acggaaacac
     2701 gcccacatta ggaacctctt tccccgaagc ccctttatgc gatgcttcag cagtataagt
     2761 cgtgtatgta atattagggt ttaggcttgt tttctgattt aaaattgccg atccttctaa
     2821 tgttaaatca taggccgcgt tatctttcgt ttgccaaatt gggctttcac tcacacgctt
     2881 catataatca aagtaacttt caccaggtct ttgcttaaag ccccaatgcc ttaaacctaa
     2941 gtcaaagtct gaatattcgc tacctgccac ccgactcagt gcgtacatga tatggcgtac
     3001 aaattcttta tttgccactt gatctgcagc ttgtgagcca ttatgagggg tcccgagtgt
     3061 cgttattgat gaaaccatat cagtgagccc tcctttaaaa agtggcgaaa ttgtaccacc
     3121 atgtttttgg tgatacgcaa tttcatcttt gctaccattc cttaaaagtt cttccattaa
     3181 acgaaccgtc tgtcctccca tactatgccc aattaaatga acttttttac ctggtctcca
     3241 gtcaggcata attcctttat aaatcttacc aaagcgttcg tgaccatatt gagctgcatg
     3301 tgctgcacca taatcaacac gaccgccttt gataaaataa tataaatcca ctgcacgtgc
     3361 ataattgcta ctaaatgcac caacacttgc ttggtgtata tcgtagcctt tcttcctcaa
     3421 cgcttcaata actttaaatt tattgcctcc ccaataattc ggatagagtg ctggtgcatt
     3481 ttcacctact aaccctaaaa atccatgtac taacacgata ggatatttat tggtagattg
     3541 cttttgctga gcttgagtgg atgatttttc taacacctct ttagaattcg ctacacgcgt
     3601 ttgggattgc tgttcttgtg ttgtttcctt ttgcgtcatt tcctcttctg aagcgccttt
     3661 tttagtttga tctttgtgtt ctgctatagc ttgctcttta ccttgatcag ttttatcctt
     3721 aacaactggt ttaagattct gtgatgtcat ttgatcgatt tcatctgtct gtgctttttc
     3781 tacatttcga gcccgcatag cttcagaaga tcgatggttc acacgtttgc tcacttcaac
     3841 atctgattgg tcttttaatg ccacatcact ttgctgagat gttaaatcct ggttttctgc
     3901 aatacgcccg gctttacggc tgtttgaatg aggaggtgcc tcaatctgac tacctgattg
     3961 cgtcttcact ttctcgctgt ttggaacatc acttaatttt tcccccttct cttgttgtat
     4021 gtcaactaaa gaagggacat ttgtattttc attgatatga gtgggatgag acgtgttagg
     4081 attatccgat gaaacacctt gctccggtgt agtaggcaat tgctcttgag atgaagcgtt
     4141 agcgaatagc gatgttttag gatttttaga gtcacctgaa tgagaatgtt gtccttcttt
     4201 ttgagataac gactgtgtat gagtgtcttc acttagcgac tgattgctta cagtcacttc
     4261 tgttctcgct aattcactag atgcttgagt agtatgctgc tcacttgcca tagcgtcatg
     4321 cccaccgatt aagaaggtca tcgtcgccaa gactgaaacc acacctacag tatactttct
     4381 gatacgataa atactttttt gattgtattg attcatgata tcacctctaa taagattaac
     4441 tccccttaat taaatccccc ttaaacaact gtaatgataa tatatcacat tagttataaa
     4501 tatatatagt atcataaaat tatatttaaa atttattaat ttacagaata tctgataaag
     4561 ggttaaagat tttagtctat attttaggta ctatgtttta ttgcttccct tagttgtctc
     4621 aatcatcaat tggatttaac tgcccatttt tatagttgtc aaacatgcgc ttatcttaat
     4681 ctttgcatca taggccatta cgttttgatg tgcatgttac cccaattttt aagtagtttt
     4741 taactttaat tctctgtctt tcttcaatat cattacatat tgtacataag cacaatatct
     4801 tctttattgg tttgaaaatt acaatgatag cggttttgtg ttttttatat caaaaataaa
     4861 atgcggtcag tagatgcccc accaaccgca aaagtataca attcataaaa tcaaacaagc
     4921 gaaaacctcg tattgttttc gcttgataat tgttctatag atttttgtta cactatactg
     4981 ttttctgatg atggtgcatg gctactttca cagtagagtc atttaataca atccatatgc
     5041 taacacatcc agtatgataa cattattttc aactattaag attggcgttg tcgtctagaa
     5101 cgtttgaata ataataaacc tgtgcctgat acaacaaata acaatgccca gaatggcgat
     5161 ttttcagtta aacctgtttg aggtaattgt tctatttgct ctggataaac tgtaccctgc
     5221 ttacgttcat gctcgtttgc ttcattaacc tttgttgata cgtcatcttc tttattgtta
     5281 aagcttaaag aaaatggcgg catgtgccct gatccttgat gttttgtcag tcctatcaac
     5341 gctttacgtt tttggtatgg tatactctct acatgttgtt ctacattttt tggaagcaaa
     5401 gccccttctg tattttgccc cttttcaact tgagcagatt ctgttgaagg tggcgtaacc
     5461 tcctcattaa cagaggattt ctctacatct tgtacggcat cattttgaga ttctgtagtc
     5521 tgagatggct tctcagaatt ctctgaggct tgttctgtat tttcaggacc tttatcctct
     5581 gttttcttag gatatacatg acccggtatc tcggtaactt caggattaaa tgatttgtca
     5641 attgtcatag aacgaagaat ttcatccgca agtgctgatt tctcagtgct tgaagtctgc
     5701 acaacctctg actcttcatc ttgcatatct actgggcgta cttctgatgt agtttcagct
     5761 aactgttgtt ttgtatgtgg gtcaacggct ctgaatgtca aacgttctcc gtttaacaat
     5821 tgtatgtctg ccgcttttaa atcaaatata aacgcacctg tcgcatcagc ttgtaatgta
     5881 gggaaactac gatattcccc taaattagat gccatctcta tccatgcatg tgcataattc
     5941 gtacgtcctt caacttttga cgtccccggt atcaacactt tcgactcgcc atgtactgct
     6001 gcttgtgtaa ggtctccata gataggttga acctccaagt cacttttagt atcatccaat
     6061 ttgttgacta ctggactgtc attctgctca tactttgttt tagcttgtgc cacacgttcg
     6121 aaaggctcaa cgttcacatt gaataatggg cctacttcgt cattagattt aaaagataaa
     6181 gtcactaaat cgccagactt caatgggtaa gatttattgt aaagacggtt caagtcaaac
     6241 tcgaaaaacc cttgatcatc aatatggcgc caaatcccgt cataacgacc ttgccactct
     6301 tgaccagtga gtgctgcttg ttcttctaac gtatcaccta ggtgcacatg ttcttgattg
     6361 attgctaacg cgactttacc ttgtacagat gtatgtcctt tgattttact tgccccttct
     6421 aaaataggtt cgatgaatac ttgctgttgg ccttgaatgg gcgtcaagcg ttcttcagga
     6481 actgtatacg caccttcata tctaggcgtc gtcacagaag ctgtcgctgt ttcttcgtct
     6541 tccaattgac ctaacgcctc caatgcctct tcgctctcaa gtgctgattc atcaaaatct
     6601 tcaaaattaa atggcgtcat cgcttcaaca tcaacttttt gattgtaaac aatttgacgc
     6661 cctttcaaat catatacaaa tttacctgta tcatccgata atacctcttc atagccatca
     6721 tctacagaca caatatcttt attgtcgatc tttacagaaa tcgctttgtt tggctgtgta
     6781 tagcctgaaa gctgtgcatc gcctggttgt actttgtcta gttgaataga tgcttcttgt
     6841 tgcgctacag gtaattctgc ttcactctct ttttcattca cagaagcaac ttgcgcctcc
     6901 ccttttactt cagtctgctc gttctccgac gcctctgcat tcccacttgc catcacaaaa
     6961 gtcaacgcca cacctgtcga tactaaacct actttaagct ttcttagttt ataatttgtt
     7021 cttaacattg ttatcctcgc tcttctactt attcattctt tatatacttt aatatattaa
     7081 tgaaataaat gttattaact gattattaac tattaattaa aagtacggca tctaacgttc
     7141 agggatttta gttttttcgc ttgtttattt gtacatatta ataatataga tgcctcctaa
     7201 agtgaacctc acacaccctc ttccaactca ctcattttat acaaataggg ctactcacaa
     7261 aggattggca ttattatggc atcgttatcg cacaatcaca gtttactatt ctgctcatta
     7321 tgatgacaca ttttgttagt aagctttttt atgacgaaca tcatatagga aaacgtatta
     7381 tttataaaca tatcaaaagg tgccgtatct taaatgccaa gttatacaca ttattttcaa
     7441 tatatttctt gtactatact ttattattta tttcatctca tatctatcat tgttgttttc
     7501 attctcaacg tttataaact catatgccca tcatcattaa acctaatcat aatcatctag
     7561 aaattttgac tttaacatgt cagagtctct agatgtcttt ttgtctacag ctataaaaat
     7621 attgtgttaa aataaaccgt ttttatttcc tcccccaata gacatcttga ttgcattgct
     7681 catcacttgt tttagaatat gacgtcaatt cctcagtcat ctcttatatg tattatggtt
     7741 tgatccccaa cgtcttatta actcaatttt tacttttctg acttaaatat atagttttat
     7801 atcaaatttt gtttacataa acttaattca ccttcataat aaaaagaaat cggttaagga
     7861 tgtgagaaaa gatgttatat ctcattttta caatgttgtt attctttgtt tggctctaca
     7921 atgtttttct gtttcttaaa gtgattttca cattaattag gaaacgcccc gtaaagccta
     7981 ccttaaaaaa atatggaatg agtttcatcc ctcttattat tctatttgtt atagttgggg
     8041 gaatgacgga cactgataaa aacaaaagtg caaaacatac gagtcaaacc caccaggaag
     8101 aaaaagataa aaaacaaaag aatgaagaaa aagataaaga tagagacaaa aaaggcaaaa
     8161 aagatgatgg gtcaaattca acatcaagcg aaaaagaatc acaatctgaa catcagtcga
     8221 atcacgaaaa caagcaaagt acgtcagaga acttaattgc cgctctattc gttaaacata
     8281 ttgatggtga tacctcaaaa ttcaatatcg atggcaaaat taaaaccgtg cgttatttat
     8341 tgatagatac gcccgaaaca aaacatccgc gtttaggtgt tcaacctttt ggtaaagaag
     8401 cctccaatcg aacaaaatca ctgttgagta gcgcaacaaa aattgaaatt gaatatgatg
     8461 tcggtcctaa aacagataag tatggtagag acttagccta tgtatttgtt gacggcaaat
     8521 tagtcaatga aatcttagtc agagaaggat tagcaaaagt cgcttatgtt tacccaccta
     8581 acactaagta tttagagcgt ttgcaagcag ctgaagcctt agcaaaacaa gaaagattag
     8641 gcatatggtc tgagcaaact gatactgttg cacaagatac cgcttcagtt aacacagctt
     8701 acacagcgcc tcaacaatcg gcgccaaatc aaaatgttgc acctcagcaa acatggttta
     8761 aaaactgtac tgagcttaat aaagtttatc ctggtggggt cccactcggt catccagcct
     8821 atcaacgtcg cttagataga aatcacgatg ggcatgcttg tgaagcccac taatatttag
     8881 caagtgcgca catatgaatt tccaaaatgt ataaataaca ggctagaagc tgtcccacaa
     8941 cagttattct agcctgcttt ttctggttag tgtcatcgat gtgttgcacg aatgtatatg
     9001 aattgataaa gattgtcgtc ccatcattaa caaatggata tttctcccta ttcctccacg
     9061 ctttcaacag ttgatttcat acctacaaat atgagaaaac attttgatta acatacacat
     9121 ccctcatttt gcaaaatcaa attattcaat taatcaaaaa caatagacca ttgtcaggac
     9181 aacctcatct cgaattacaa aaaaataatt tttcttatta atcgtttctt aatatcatgg
     9241 tataattagt gaagaaaatc acaaaaagaa aggttgtcaa tgatgaaact tcaaaaagcg
     9301 cctttagcaa catcaggatt gattttaggt ttgttgggac tagggaatct cttgaaagac
     9361 atttctctta ttttaaacgc catttgtggc atcttagcta ttttaatttg gcttcacttg
     9421 ttatacagta tgtttcataa ctttaatcat gttaaagatc aattgaataa ccctctggtc
     9481 gcatctgtgt tcaccacatt tttcatgtca ggatttttag tcactactta tttaaatacg
     9541 ttttttagca atgtcactgt catcaatcag ttcattatcc ctttatgggt tgtgtgcctt
     9601 attggaatgc tactacatat gactattttt tcaatgaagt atttaaaacg ttttactctc
     9661 gagaatgttt atccatcatg gactgtcctt tatattggta ttgcaattgc tggattgact
     9721 gcaccagtga gcggctatta tatcattggt aaagctagcg ttatctatgg ttttctagcc
     9781 acttgtattg ttttgcctat tgtatttaag cggttaaaag catatccatt gcaacgatct
     9841 atcaaaccca atacttctac catttgtgca ccgttttctt tagtggcagc ggcctatgtg
     9901 cttacctttc ctaatgcgaa tagttacatc atcattattt ttttagtatt gtctcaattt
     9961 ttttattttt atatcgtttt acagttacca caattattaa aagcaccttt ttcaccagtg
    10021 ttttcagctt ttacatttcc gttagtcatc tcagcaactg ctttaaaaaa cagtatgtca
    10081 gtattggcat ttcctgaaat ctgggaatgg ctgttacttt ttgaaatgtt attagctacc
    10141 ttaattgtgt ttagggtgct tttaggttac atgcatttct ttttaaaaca agcctaaaaa
    10201 tagggcactt gggaaggata tgtttatagt atcaacgtat tcaacgccaa ataaaaag
//
LOCUS       DANHPA010000087        10174 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.087, whole genome shotgun sequence.
ACCESSION   DANHPA010000087 DANHPA010000000
VERSION     DANHPA010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 10174)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10174)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10174
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.087"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            122..1636
                     /locus_tag="PTC28_001825"
     CDS             122..1636
                     /locus_tag="PTC28_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HDK5717102.1"
                     /translation="MSEHDEINIQIIATSDMHSHILNETERSNIYRAGTYINEVRQQH
                     QHVVLVDNGGNLAGSVTAFYYAIIAPYKRHPMIKLMNAMNYDASGMSENEFKYGLDFF
                     NRSVALSRFPWLSANVEYAVTHEPYFSTPYTVKDIDGLKLVVMGVSSEGLMKNENVEM
                     EPEVIVESATYAAQRWIRYIYETIEPDFLIVLYHGGLSKLSHDAKSQFENRAEEIMRQ
                     AGIIDLMITGHQHETIIENDGMTLYVQAGQNAENVIHVNAKFKKRRNSFELLEMQPKI
                     VTLTDYEEDERLLNLTYYDRKAIRNWKNEYIIAHEVDMQFDTFHELLIQPHPYIQLLH
                     QSLNHETEIPLTCVHLPLPNTKGLKGRLKNEDVYNSYPHPDKPIDLTLKGSEIKRLIE
                     ESVSHLELEKGQWTLKDTDPTHFLFWSGFTYTVDMSKPLNARVTDFELREDYCYRVVT
                     TDYIYRHYRHLLSEAVVHQTFPSTMPELLVREIQAEQERQLVPQNMHIVSGLSL"
     gene            complement(1732..4857)
                     /locus_tag="PTC28_001826"
                     /pseudo
     CDS             complement(1732..4857)
                     /locus_tag="PTC28_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728923.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fibrinogen-binding adhesin SdrG C-terminal
                     domain-containing protein"
     gene            4855..5664
                     /locus_tag="PTC28_001827"
                     /pseudo
     CDS             4855..5664
                     /locus_tag="PTC28_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015543625.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="primase C-terminal domain-containing protein"
     gene            6011..6181
                     /locus_tag="PTC28_001828"
     CDS             6011..6181
                     /locus_tag="PTC28_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000713595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717103.1"
                     /translation="MKKFIYRVLENDEVVAIFNEQQYAQDFIAYEKTISDKQFEIEKV
                     DIADWLLQPREF"
     gene            6195..6812
                     /locus_tag="PTC28_001829"
     CDS             6195..6812
                     /locus_tag="PTC28_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002295591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HDK5717104.1"
                     /translation="MAKIGYARVSSKEQNLDRQLQALQGVSKVFSDKLSGQSVERLQL
                     QAMLNYIREGDIVVVTELDRLGRNNKELTELMNQIQIKGATLEVLNLPSMNGIEDENL
                     RRLINNLVIELYKYQAESERKRIKERQAQGIEIAKKKGKFKGRQLKFKENDPRLQHAF
                     DLFLNGCSDKEVEEQTGINRRTFRRYRARYNVTVDQRKNNEKRDS"
     gene            6812..7090
                     /locus_tag="PTC28_001830"
                     /pseudo
     CDS             6812..7090
                     /locus_tag="PTC28_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000108743.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="topoisomerase"
     gene            7327..7563
                     /locus_tag="PTC28_001831"
     CDS             7327..7563
                     /locus_tag="PTC28_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001159903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717105.1"
                     /translation="MQFLEPKNKNAKSVDWEISEQVRVIVKQYAEYAERTESEAVDEF
                     LLNILDDKKFIEWIANKRSNKRIVEKMGIKDRVG"
     gene            7570..9522
                     /locus_tag="PTC28_001832"
     CDS             7570..9522
                     /locus_tag="PTC28_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017431446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insertion element protein"
                     /protein_id="HDK5717106.1"
                     /translation="MTKLKRLATKEDEIVDVKIPISNEELKDRAKQYDLLTPKRFATR
                     YNKMLFLPTSFKWNGSEYPIQYNYCINPFCCNFGKEQHKFKDVKGKPSRYKMTGSSKD
                     KGHKGMYCNDNPIGRGVSQNCTVTPLSNWSVVEEIKRLIEINSIQDVEPDYQFHKEGC
                     SEEESTPFNEPKQFYKRGKSRGKSQRYQCKACKKFTNVLPKREETTTYHQQKNTILPM
                     FAKMVVGRVSVSRTCDILGIGVGTYYHKLEWLYRRCLEFLERYETQPLQTKKFNEMWL
                     NTDKMHYYLNNVRKKGQGSKKYTGFEDLNMQTYIVVSAEVLSRYVFRSDVAYDWNISM
                     DELNEDTRKFKEDHLNTFSRKNDRLDWSYYPQEPSANDSENRNAYLHELGKITNRSIF
                     VDGLNVDAPYTTTAHYWLIKQMVNADEWRMISDDDFSIRNAFYRVFTKELRLSDAHHF
                     ICQVNKTKSRKQCLKEFGQAKAELLDWGDIRGFKTKFLRTLASHYLTELLTSHQFHEE
                     AISKDGERYRKYADNPIKHPLATKDKGFYSVDCRTDLSALEPNEIAKMLLNVNDHSTN
                     SFIQQIRRYISSLERPLTTARGDKKSYIYANFNPKYAQFAITILRTYYNFCRPFKSAD
                     KKVLTPAQRLGITDKQFDWKDIIYFK"
     gene            complement(9594..10091)
                     /gene="dfrG"
                     /locus_tag="PTC28_001833"
     CDS             complement(9594..10091)
                     /gene="dfrG"
                     /locus_tag="PTC28_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000868795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethoprim-resistant dihydrofolate reductase
                     DfrG"
                     /protein_id="HDK5717107.1"
                     /translation="MKVSLIAAMDKNRVIGKENDIPWRIPKDWEYVKNTTKGHPIILG
                     RKNLESIGRALPDRRNIILTRDKGFTFNGCEIVHSIEDVFELCKNEEEIFIFGGEQIY
                     NLFFPYVEKMYITKIHHEFEGDTFFPEVNYEEWNEVFAQKGIKNDKNPYNYYFHVYER
                     KNLLS"
BASE COUNT         3211 a         1668 c         2020 g         3275 t
ORIGIN      
        1 atgcttaatt ttttaaattg aattcatatc cattaatgtc tgtgcaaagg agtaataata
       61 gtgggtggat gtcgagatat ggtagaatac gagatgaata ttgagatttg gggtgaaagc
      121 aatgagtgag catgatgaaa taaatataca aattatagcg acttctgata tgcatagcca
      181 tatactcaat gaaactgaac gttctaatat atatcgagca gggacatata ttaatgaagt
      241 aagacagcaa catcagcatg tcgtattagt ggacaacggt ggtaatttag caggcagtgt
      301 gacagctttt tattacgcca ttattgcacc atacaaaaga catccgatga ttaagttaat
      361 gaatgcgatg aactatgatg cgagtggcat gagcgaaaat gaattcaaat atggtttaga
      421 cttttttaat cgttctgttg cgttatcacg tttcccatgg ctatcggcga atgtagaata
      481 tgctgtcacc catgaaccgt atttttctac gccttataca gtgaaagata ttgatgggtt
      541 aaaattagtc gtgatggggg tttcttcaga agggctaatg aaaaatgaaa atgtagaaat
      601 ggaaccggaa gtgattgtcg aaagtgcgac ctatgcggca caacgttgga ttcgctatat
      661 ttatgaaacg attgaacctg attttcttat tgtgttgtat catgggggtt tgtcgaagtt
      721 gagtcatgat gctaaatcgc aatttgaaaa tcgagcggaa gaaattatga ggcaggctgg
      781 gataattgat ctcatgatta ctgggcatca acacgaaacg attatcgaaa atgatggtat
      841 gacactgtat gttcaagcag gtcaaaatgc tgaaaatgtc attcatgtta atgcgaaatt
      901 taaaaaacga cgtaactctt ttgaattgtt agagatgcag ccaaagattg tcacattgac
      961 ggattatgag gaagatgaac gtttattgaa cttaacgtat tacgatcgaa aagcgatacg
     1021 gaattggaaa aacgaatata ttatcgcgca tgaagtcgat atgcaatttg atacgtttca
     1081 tgagttgtta atccaacccc atccatacat tcaattgtta catcaaagtt tgaaccatga
     1141 aacggaaatc ccattaacat gtgtacatct gcctttaccg aatacgaaag gcttaaaagg
     1201 gcgtttgaaa aatgaagatg tctataattc gtatccgcat cccgacaaac cgattgatct
     1261 tacattaaaa gggagtgaaa ttaaacgttt aattgaagaa agtgtaagtc atcttgaatt
     1321 agaaaaaggg cagtggacgt tgaaagatac agacccgaca cactttttat tctggtcagg
     1381 ttttacatat actgtagata tgtcgaagcc tttaaatgcg cgtgttacgg attttgaatt
     1441 gcgagaagat tattgttacc gcgtggtgac gacggattat atttatcgcc attatcgtca
     1501 tctgttaagt gaagcggtcg tacatcaaac atttccaagc acaatgccag agttgctcgt
     1561 tcgagaaatt caagcagaac aagagagaca actagtaccg caaaatatgc atatcgtaag
     1621 tggactatca ttgtaatcga atatgagatt aaaaaagacc catgtctagc atttcataaa
     1681 gaaatgcgac atgggtcttt gtgtgcatca catttaaatc ataagttgaa cttagtgtga
     1741 ttgtttttta tcgtggcgtt ttttacgtgc aaagagtaat gcgcctaaag cagctaaaat
     1801 accaccgaat aatgtacctt gatgtgattc agtttcacct gtttcaggta aagctttttg
     1861 ttgttgagat ggttttgctt tattgccgtt tgaatgaacc ggttgtgtga ctggagttaa
     1921 gcttggtttt tcaggatttt gaacacctgg cacacttgga ttatttggct gttctggact
     1981 aggattttta ggttgtcctg gctcagaagg ctgttctgga ctaggatttt caggttgacc
     2041 cggttcagaa ggttgttctg gactaggatt ttcaggttga cctggttcag aaggttgctc
     2101 tggactagga ttttcaggtt gacctggttc agaaggttgc tctggactag gattttcagg
     2161 ttgacccggt tcagaaggtt gctctggact agggttttca ggttcagtcg gtggctcagg
     2221 tgtaacttga gtgaaaccac tgtcaattgt taagtcatcg ccatctttaa ctgtaacttt
     2281 tgtagatgta ccgttagagt cattatcagc tgtaccttga cctgtaacag tcggtgtgta
     2341 accttcaggc gtttcaaatt caatcgtata gtcgccttct ttcacgtttt caaataaata
     2401 gttaccgtta gcatcagttg tacgtgtatc tacgacgtta ccatccgcat cttttaaagt
     2461 gactttaacg tcagagatgc ctggttcatt gtcatcttgg ataccgtctt tatttaagtc
     2521 atcccaaact ttgtcgccaa ctttgtgtgt aacaggttct ttgtagaaac cgctatcgat
     2581 tgttaagtca tcgttacctt cgactaaaat aagggaagat gtcccattag agtcagtgct
     2641 gactctgcct tggcctgttt gtgtcggtgt ataaccttca ggcgtttcaa attcaattgt
     2701 atattcgcct tctttaactt tttcgaataa gtaattccct ttatcatcag tcgtacgtgt
     2761 atccacaacg ttaccatccg cgtcttttaa agtgacctta acgttagcga tacctggttc
     2821 attttggtct tggatgccat ctttatttaa gtcttcccaa actttgtcgc cgacgttgtg
     2881 tgttggtgtt tcagtttggt aaaaaccttg gtcgatagtt aagttgttcc catcactaat
     2941 gacagcttgt acatttgtag gaccatcaga gtcaagggcg tcattacctt ggttggatgg
     3001 acttgcagca tagccttccg gtgtttcaaa acccacttga taattaccat tttttaaatt
     3061 atcaaagata tatttaccat tcgtgtttgt ataagttgta tccaaaatgt tgccatcaag
     3121 atcttttaaa gtaaccttta catcagcaat accagtttca ccttgatctt ggataccatt
     3181 tttattcaca tcattccaaa ctttgtcgcc taattgatat gatgcttcat ttccgtcggc
     3241 tgtaccacca gaagagcttt tcacaatatc gttatcccaa gtaatatagt tatattgacc
     3301 atatcggttt tgagtggcca taatagcacg caagtttaaa tcctctttag aatccaaatt
     3361 ttctttgctc gtcactttaa cgatatagcg ttgcccattt aagtttccaa agtaaatatc
     3421 tgccaaatta ttatcacgat aaacaatatt aaattgtttt gtgacatctt catattcact
     3481 gtcattcaca ccgaaactac tattaagtgg ttgaccatca gcaactttta aaatcttgat
     3541 ctgcgttgta tctggtttca cttgcccatt actcttagtt ggatcaactt ggaacccttg
     3601 aactcttaca actgtaccgt ttgccgtttt ttgtaatggg ttgacataaa tgtattgatc
     3661 atattcccca gttttaggat cttctgaagt gatcattgat tttaagttag aatcaccttc
     3721 actgtaatat tgaccgtaat tcactttaat ttgtgtatct aaagattcgc ctgcaatgtc
     3781 gtattttaat ggatatgttt gagaatctgt tgccacttta cgatccataa attgagtcaa
     3841 gttaaacgaa ccggacacat tttctaaatt attaacgaca ttagtgaacg tgtatgtcat
     3901 agtatggttg gcaacatcat attcacctaa agccacaact tcaccttttt gatttgtaat
     3961 tttttctcta aagtcaggtg aatggcgcgt gtcaccaaaa gtattgacag tgtcaggcat
     4021 ttttacagta aagtagtcac cttctttaac agtcccgttt acgttaaagt tactttttaa
     4081 ataaaagttt cctgagttgt ttggctcgat ataagattca gttattttca tatttgatgc
     4141 tgttactttg tcatttacgt ttgtcccacc agctgcaaca gcagtaggtt gacttgcact
     4201 gactgcgcga agttgagttg tacctttaat gtcttttaat tgtgcaggtg cttttttgtt
     4261 tgcgactgtt gtatttgttg gtgcttttgt cgtttcagtt tgattggatg ttgattcagt
     4321 aggttgttcg tttaaagttg tttgagaagc agttgtttca ctatttttta attctgttga
     4381 aggtcgattg tcttctgatg tttctggtga aggtactgtc gatgtaggat cttgttgagg
     4441 tgtatttgaa acttgtgaat cagaagttgt atctgcttta ggttgttcat ttacttgaga
     4501 ttcactgtta gttgtgtttt ctttttctgc ttcttgattt gataggtttg ctgatgagtc
     4561 actttgcaat gcttcatttt ttgcttcttt tgtttgagca atgtcagcgt ctttcgatgt
     4621 tgtttcatct tgtgctgcac tgtctttaaa ttctgatgat gcattatctg gagtttgctc
     4681 aacttgtgtt gcttcttttt cattcacttc ttgattttgc gttggttcgg tatcactttt
     4741 tgattgttct gttgtaggtg ttgaatcatc tgtagaaagt gcattcgctt ttgcttgtgt
     4801 atcatcttgt ttttctgtcg acacttcatt ggtatcgcct tggtcttgta attgggcttt
     4861 actcgttcaa gtctaacggt tttaagcggt acagaaggca aaaaacaagt agatgaaccc
     4921 tggtttaatc tcttattgca cgaaacgaaa ttttcaggag aaaagggttt agtagggcgc
     4981 aatagcgtta tgtttaccct ctctttagcc tactttagtt caggctattc aatcgaaacg
     5041 tgcgaatata atatgtttga gtttaataat cgattagatc aacccttaga agaaaaagaa
     5101 gtaatcaaaa ttgttagaag tgcctattca gaaaactatc aaggggctaa tagggaatac
     5161 attaccattc tttgcaaagc ttgggtatca agtgatttaa ccagtaaaga tttatttgtc
     5221 cgtcaagggt ggtttaaatt caagaaaaaa agaagcgaac gtcaacgtgt tcatttgtca
     5281 gaatggaaag aagatttaat ggcttatatt agcgaaaaaa gcgatgtata caagccttat
     5341 ttagcgacga ccaaaaaaga gattagagaa gtgctaggca ttcctgaacg gacattagat
     5401 aaattgctga aggtactgaa ggcgaatcag gaaattttct ttaagattaa accaggaaga
     5461 aatggtggca ttcaacttgc tagtgttaaa tcattgttgc tatcgatcat taaattaaaa
     5521 aaagaagaac gagaaagcta tataaaggcg ctgacagctt cgtttaattt agaacgtaca
     5581 tttattcaag aaactctaaa caaattggca gaacgcccca aaacggaccc acaactcgat
     5641 ttgtttagct acgatacagg ctgaaaataa aacccgcact atgccattac atttatatct
     5701 atgatacgtg tttgtttttc tttgctgttt agtgaatgat tagcagaaat atacagagta
     5761 agattttaat taattattag ggggagaagg agagagtagc ccgaaaactt ttagttggct
     5821 tggactgaac gaagtgaggg aaaggctact aaaacgtcga ggggcagtga gagcgaagcg
     5881 aacacttgat cttttaagtt gctatcattt ataggtcaat agagtatact tatttgtcct
     5941 aatatggttt tagcagtata attgacttgg tgaataggtc atttaagttg ggcataatag
     6001 gaggagtaaa atgaaaaaat ttatttatcg agttttagaa aatgacgaag tggtggctat
     6061 ttttaatgag caacaatatg cgcaagattt tatcgcttac gaaaagacaa tttctgataa
     6121 gcaatttgaa attgaaaaag tagatatagc tgattggtta ttgcaaccga gagaatttta
     6181 gaggttggtt gaaaatggct aaaattggtt atgcacgtgt cagtagcaaa gaacagaact
     6241 tagatcggca attacaagcg ttacagggcg tttctaaggt cttttcagac aaattaagcg
     6301 gtcaatcggt cgaacgccta caattacaag ctatgcttaa ctatattcgt gaaggggata
     6361 tagttgttgt tactgaatta gatcgattag gacgaaataa taaagaatta acagaattga
     6421 tgaatcaaat tcaaattaag ggggcaaccc tggaagtctt aaatttaccc tcaatgaatg
     6481 gtattgaaga tgaaaattta agacggctga ttaataattt agtgattgaa ttgtataagt
     6541 accaagcgga atctgaacgc aaacgaatta aagaacgcca agcccaagga attgaaattg
     6601 ctaagaaaaa aggaaaattc aaaggtcggc aactgaaatt caaagaaaat gatccacgtt
     6661 tacaacacgc tttcgattta tttttgaatg gttgttccga taaagaagtt gaagaacaaa
     6721 ctggaatcaa tcgccgaacg tttagaaggt atcgagcaag atataacgtg acagtagatc
     6781 aaagaaaaaa caatgaaaag agggatagtt aatgagtacg gttattttag ctgaaaaacc
     6841 aagccaggca ttagcctacg caagtgcttt aaaacaaagc accaaaaaag acggttattt
     6901 tgagatcaaa gacccactat ttacagatga aacgtttatc acctttggtt ttgggcattt
     6961 agtggaatta gcagaaccag gtcattatga cgaaaagtgg caaaattgga aacttgaatc
     7021 attgcctatt tttcctgatc gatacgattt tgaagtggca acagataaaa aaaagcagtt
     7081 taaaattgtt aagtagttca gttttggagt acaaaaagtg aaaatgtaaa cctaaatgag
     7141 tatcaaattg caactgaatt tgatactcgt tttttattgt taaatcaacg tttgttgtta
     7201 atttacacca caaaatgtaa gttaaaatgt atataaaaat gcgaacgtga aataattatt
     7261 gtaggaatgc aaattggtgt gttaaaatgg ttacaattta ctaagcaaaa aggggtgcat
     7321 tttcctatgc aatttcttga gccaaaaaat aagaacgcta agtctgtgga ttgggaaata
     7381 tcagagcaag taagggtgat agttaagcaa tacgctgaat atgcagagcg tactgaaagc
     7441 gaagcagtgg atgaattctt attgaacatt ttagacgata agaagtttat tgaatggatt
     7501 gccaacaagc gaagtaataa gcggattgtt gaaaaaatgg gtatcaaaga tagagtgggt
     7561 tgatagacaa tgaccaagct taaaagatta gccacgaagg aagatgaaat tgtagatgtt
     7621 aaaattccga tttcaaacga agaattaaaa gatagggcta aacaatatga tttattaact
     7681 ccaaaacgat ttgcaacaag gtataacaaa atgttgttct tgccaacgtc ttttaaatgg
     7741 aacggttctg aatatcccat tcaatataat tactgcatca atccgttttg ttgtaatttt
     7801 gggaaagaac agcacaaatt caaagatgta aaagggaaac caagtcgata taaaatgact
     7861 ggtagttcca aagataaagg tcataaaggt atgtactgca atgacaatcc tattggcaga
     7921 ggtgtatcgc aaaactgtac agtaacccct ttatctaatt ggtctgttgt tgaagaaatt
     7981 aaacgcctta tagaaatcaa tagcatccaa gatgttgagc cagattatca atttcataaa
     8041 gaaggctgct cggaagaaga atcaacccca ttcaatgagc cgaagcaatt ttacaaaagg
     8101 gggaaaagta ggggcaaatc tcaacgctat caatgtaagg cgtgtaagaa gttcactaat
     8161 gttctaccaa aaagagaaga aaccactact tatcaccaac aaaagaacac cattcttcca
     8221 atgttcgcta agatggttgt tggaagggtt tcagtcagtc gtacttgtga tattttagga
     8281 attggagttg gaacctacta tcataagctg gagtggctgt ataggcgttg tttggagttt
     8341 ttagaacgat atgagacaca accccttcaa acaaagaaat ttaacgagat gtggcttaat
     8401 acggacaaga tgcactacta cctaaataac gtccgtaaga aaggacaagg ttcaaagaaa
     8461 tatacggggt ttgaagacct taatatgcaa acgtatatag ttgtatctgc tgaggtctta
     8521 tcaagatatg tgttccgttc tgatgttgcc tatgattgga atatttcaat ggatgaatta
     8581 aatgaagata caagaaaatt caaagaagac catctcaata cttttagtcg taaaaatgat
     8641 aggttagatt ggtcttatta tccacaagaa ccatccgcta acgatagcga aaataggaat
     8701 gcttatcttc acgaattagg gaaaattact aataggagta tatttgtcga tggtttaaat
     8761 gttgatgctc cttatactac aactgctcac tattggttaa ttaaacaaat ggttaatgcc
     8821 gacgaatggc gaatgattag tgatgatgac ttctctatta gaaacgcctt ttatagagta
     8881 ttcacgaaag aattaaggtt gagcgatgca catcatttta tttgccaagt taacaagacg
     8941 aaaagcagaa aacaatgctt aaaagaattc ggacaagcaa aagcagaact gctcgattgg
     9001 ggagatatca gaggattcaa aacaaagttt ctacggactt tggcatctca ttatctaact
     9061 gaattactaa caagtcatca attccacgaa gaggctatta gtaaagatgg agaaagatat
     9121 cgcaaatatg ccgataaccc tatcaaacat ccattagcca ctaaggataa aggattttat
     9181 tcagttgatt gtagaacgga tttatctgct ctggaaccaa acgaaatcgc aaagatgcta
     9241 ttaaatgtta atgaccattc gaccaatagc tttattcaac agataagacg ttatatatca
     9301 tctcttgaaa gaccattaac aacagctcgt ggtgataaga agagctatat ttacgctaac
     9361 ttcaatccga agtatgctca atttgcgatt acaattctaa gaacttacta caacttttgt
     9421 cgccctttta aatcagcgga taaaaaggtt ttgacacctg ctcaaagatt agggattaca
     9481 gataaacaat ttgattggaa agatataatt tatttcaaat gacaaaaaga gcttggagta
     9541 atcccaagct cttgtgcttt atctttactg ttcttcttca attaacgcac ccgttaactc
     9601 aataagtttt ttctttcata tacatgaaaa tagtagttat acggattttt atcattcttt
     9661 atcccttttt gggcaaatac ctcattccat tcctcataat tcacttctgg aaaaaaagta
     9721 tctccttcga attcatgatg tatttttgtg atgtacattt tctcaacata agggaaaaac
     9781 aaattataaa tctgttctcc tccgaaaata aaaatttctt cttcgttttt acataactca
     9841 aaaacatctt ctattgaatg aacaatttca caaccattaa aggtaaaccc cttatctctc
     9901 gtcagaataa tatttcttct gtcaggtaag gctcttccga ttgattcaag gttcttccta
     9961 cctaatatta tcggatgtcc ctttgtagta tttttaacat attcccagtc cttgggaatc
    10021 ctccaaggaa tgtcattctc tttgccaatc actctattct tatccatcgc agcaatcaaa
    10081 gaaactttca tttataacac agccttttta actaatttac catctaattt cttatttcta
    10141 tcaaaaaacc ttttctcatt atcctgcccg ttag
//
LOCUS       DANHPA010000088        10121 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.088, whole genome shotgun sequence.
ACCESSION   DANHPA010000088 DANHPA010000000
VERSION     DANHPA010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 10121)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10121)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10121
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.088"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(190..489)
                     /locus_tag="PTC28_001834"
     CDS             complement(190..489)
                     /locus_tag="PTC28_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MazG-like family protein"
                     /protein_id="HDK5717108.1"
                     /translation="MNQLIKQVEQWSIDKNLHNGNPDRQALKFYEEAGEVAAALTREN
                     IEALKDGIGDAVVTLIILAQQHDFTLHECLQTAYDEIKDRKGKTINGSFIKESDL"
     gene            complement(473..718)
                     /locus_tag="PTC28_001835"
     CDS             complement(473..718)
                     /locus_tag="PTC28_001835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717109.1"
                     /translation="MRRFKEFKDYDNCDLSAEEQLEEFVKIHPDAKVVGYTNGLFWNV
                     NNKERAYILVEYEEDEQDDTMHNFKKSEEEQQNESIN"
     gene            complement(720..917)
                     /locus_tag="PTC28_001836"
     CDS             complement(720..917)
                     /locus_tag="PTC28_001836"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717110.1"
                     /translation="MIYVILYSKELFTGVFNTHADDVYYTDKNKVFKRLEDEGYRFEH
                     DDTFLRDNHTIAEIIGLEEAF"
     gene            complement(932..1102)
                     /locus_tag="PTC28_001837"
     CDS             complement(932..1102)
                     /locus_tag="PTC28_001837"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717111.1"
                     /translation="MNFVMETKKEVIAEIIEQLVEDTGETDAYELIKFCRDYGDEDVS
                     VIKDGDEYIIGT"
     gene            complement(1354..1617)
                     /locus_tag="PTC28_001838"
     CDS             complement(1354..1617)
                     /locus_tag="PTC28_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002497590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3310 domain-containing protein"
                     /protein_id="HDK5717112.1"
                     /translation="MDVNNGEATTDFVNHPQHYTYGDVEVIDYIEQVIQDYPPAIAFS
                     IGNAIKYISRANRKAGKEDLEKARWYLKRAYDKWEEAANEYKR"
     gene            complement(1629..2126)
                     /locus_tag="PTC28_001839"
     CDS             complement(1629..2126)
                     /locus_tag="PTC28_001839"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717113.1"
                     /translation="MIKNKTLTWKIVTERISDGWDADLAHKLSVNFKGPGDDIKYHFK
                     RGTEIIKVPYTKLKGLEEKGLTVFIIAQKLRRGATIEEALCVDDATLPKPKNYDGKLI
                     RELQEASSKAAYIRYKKEKQLHRKPWLKTVQQQHKRGNYCKYLFNRSSFVKVKKDLYG
                     RDQIV"
     gene            complement(2142..4094)
                     /locus_tag="PTC28_001840"
     CDS             complement(2142..4094)
                     /locus_tag="PTC28_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HDK5717114.1"
                     /translation="MNIDIETYSSNDILKCGVYKYVEAKDFEILIIAYSIDGGSVSAI
                     DMTMLDDTEFHASYETFKIALFDPNVKKHAFNANFERTCLAKHFDADMPPEEWSCTMV
                     NATRLGLPSSLEKVGNALNLQNQKDRAGKNLIRYFSVPCKPTKVNGGRTRNLPQHDPV
                     KWQQFIDYCIRDVEVEMSIATKTKDFPVTEEEQKYWNLDQRINDRGIKLSKELMLGAN
                     ELDKMSKEDLLKQAIQITRLENPNSTSQLLKWLNEEQGLDIPNLQKKTVQEYLKRATG
                     KAKQMLEVRLQISKTSVKKYNKMHDMMCVDERVRGLFQFYGASTGRWAGRGVQLQNLT
                     KHYMSAVELDIARDFIKAQRFDDLSLLLATPPQDLLSQLVRTTFVAKDGYELAVSDFS
                     AIEARVIAWYAKEQWRLDVFNTHGKIYEASAAQMFGVPIESITKGDPLRQKGKVSELA
                     LGYQGGPGALKAMGALDMGINESELQGLVDSWRKANPNIVNFWKACQDAAINTVRSRK
                     THYTHGLRFYIKKGLLMIEIPSGRSLAYPKARISENDWGAPVVEYMGLDINRKWAKLK
                     TYGGKLVENIVQATARDLLAVSMLRLDKAGFNIVGHVHDEVIIEIPQNSNGLAKIEKI
                     MSNPVKWAEGLNLNSDGFTSPFYMKD"
     gene            complement(4157..4708)
                     /locus_tag="PTC28_001841"
     CDS             complement(4157..4708)
                     /locus_tag="PTC28_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2815 family protein"
                     /protein_id="HDK5717115.1"
                     /translation="MKAKLIGTKVITGKVRASYAHIFEPHRMQEGQDAKYSVSLIIPK
                     TDTSTIQAIKKAIEEAKEAGKAKFGGKIPANLKTPLRDGDVEREDDPNYQGAYFINAS
                     SKNAPGIVDQNKIRLTESSTVVSGDYIRASINMYAFNTSGNKGIAAGLNNIQLIEKGE
                     PLGGASSAEDDFDEIDTDDDDLL"
     gene            complement(4729..5895)
                     /locus_tag="PTC28_001842"
     CDS             complement(4729..5895)
                     /locus_tag="PTC28_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2800 domain-containing protein"
                     /protein_id="HDK5717116.1"
                     /translation="MKLDHTNRAHAKLSASGAKQWLNCPPSIKASEGIVDRTSIFAEE
                     GTFAHELSELYFSRKYGGLTEIEFNKAFSNYKHNEYYSEELREYVEQYVDMVEERVNE
                     AKARDKDVITMFETRLDLGKYVPESFGTGDVIVYAAGVLEIIDLKFGKGVEVSAIDNP
                     QLRLYGLGAYELLSILEDVHTVKMTIVQPRLDNFSTEEMNAEKLVAWGTDYVKPRAEL
                     AYKGEGEFKAGEHCMFCKIKHSCRARAEFMQDVPDTPAHLLSDDEIAELLYKVPFIKK
                     WAEEVESYALEQMLEHGKSYDGWKLVEGRSRRVMTDTQAIQDRLIKEGHKVENITETK
                     LLSITNLEKLIGKKAFNGLVGDYIDKPPGKVTLAKETDKRKAIIQSAEDEFDKI"
     gene            complement(5892..6227)
                     /locus_tag="PTC28_001843"
     CDS             complement(5892..6227)
                     /locus_tag="PTC28_001843"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717117.1"
                     /translation="MAILEAILEELKLLNQNLSVANMEPSTTKESNIKKSVDEGPAVP
                     KEADKPTQEFTRDYVMSLGKKFVMTVADEEKDALKSKLTELGADKLSLLAPEHFPEIV
                     EYLKARIGS"
     gene            complement(6302..6616)
                     /locus_tag="PTC28_001844"
     CDS             complement(6302..6616)
                     /locus_tag="PTC28_001844"
                     /inference="COORDINATES: protein motif:HMM:NF022121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2482 family protein"
                     /protein_id="HDK5717118.1"
                     /translation="MDFKNMNEEQIIEVVTSKSKELYDLIVKVDEETDFNISLITGIA
                     LDKGVVQNIFNQIVVGKPSSIVNMLVTADNFKKIVESTIAIKSLRDYVEIMSKITKKT
                     DN"
     gene            complement(6618..6794)
                     /locus_tag="PTC28_001845"
     CDS             complement(6618..6794)
                     /locus_tag="PTC28_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717119.1"
                     /translation="MKSLIAWFVTAAAAFISTLLLALSGVYFTTLFVLVILIEIAAYN
                     LTKYFLKNIESEEI"
     gene            complement(6796..7119)
                     /locus_tag="PTC28_001846"
     CDS             complement(6796..7119)
                     /locus_tag="PTC28_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF771 domain-containing protein"
                     /protein_id="HDK5717120.1"
                     /translation="MVQTLQVTVPIPDGFVLIEKDKVRELEDLANDPVWDLKDLKQKL
                     KMSSDDTIKTKFLYNPKFEKQLKKLGIAHYPDESFNRWRFNARKMSRFIDENFSEIIK
                     SKGGD"
     gene            complement(7342..8118)
                     /locus_tag="PTC28_001847"
     CDS             complement(7342..8118)
                     /locus_tag="PTC28_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage regulatory protein/antirepressor Ant"
                     /protein_id="HDK5717121.1"
                     /translation="MQVLQEIKIENNSELGAVVSSRVVANELGRQHKHVLEGIDEVAR
                     NSTADISALFIPNQYKAKNGKKNREYLLTKDGFTLYMFNIQGHNEFKMAYINKFNEME
                     NALQNRLPGTYKEALTQLLETVERNEKLELENNMQKQKIAEYEPKASYLDTILNNKSL
                     VTVGQIAKDYGMSAQALNKLLHDLKVQYKQSGQWLLYSNLHDKGYTHSSTTEIEHKDG
                     STSVRMNTKWTQKGRLFIYELLKNKGILPSIEKSNVVTNR"
     gene            complement(8174..8341)
                     /locus_tag="PTC28_001848"
     CDS             complement(8174..8341)
                     /locus_tag="PTC28_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717122.1"
                     /translation="MEEKKIDLRSLTKDEFEGIRIPVLFLKIQLFFVENDISEEDCKV
                     LARMLNAYYEG"
     gene            complement(8378..8821)
                     /locus_tag="PTC28_001849"
     CDS             complement(8378..8821)
                     /locus_tag="PTC28_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000435352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717123.1"
                     /translation="MEQITLTKEELKEIIAKEVRETIRGKKPIGSGSIFNEVRIEHDD
                     FERINKQYEFAKYLSVGRMERLNHPIPIKRYKSGFELVHRKVFVQEVHDHIRKLTLSA
                     FGVTLNSDLSKSEYEEAAELYEKIKSFYLHLYKKRLSKLTIEDFE"
     gene            complement(8867..9079)
                     /locus_tag="PTC28_001850"
     CDS             complement(8867..9079)
                     /locus_tag="PTC28_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDK5717124.1"
                     /translation="MTTSVADKPYLKIKSLIALKGTNQKEVAKAIGMSRSLLSIKINR
                     INGRDFTTSEAKKLADHLNVKVDDFF"
     gene            9231..9953
                     /locus_tag="PTC28_001851"
     CDS             9231..9953
                     /locus_tag="PTC28_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000511086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDK5717125.1"
                     /translation="MGIGEGLKNLRKNKNMTMEQLATDLNNKYPDLMKLTKGKISKWE
                     NEKEEPRLSTAKVLAEYFNVKINDLYSEASTTYKDENSITSIYDKLTPPRQKRVLDFA
                     NEQLNEQNNKVLHINSNNIVSEEVAVYGYASAGTGETLIDGVEFTTQYNGHIPNHDFA
                     LQVNGDSMEPMFEDKEIIFIDKTKQINSGQIGIFVIDGEAYLKKVFINEEGIRLVSLN
                     SKYPDLFFDKNHDIKVAGKVIL"
     gene            9965..>10121
                     /locus_tag="PTC28_001852"
     CDS             9965..>10121
                     /locus_tag="PTC28_001852"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717126.1"
                     /translation="MEKKFGVAAILDEYTIIINAGKSDDVSEGDSLSILSDSTIEIKD
                     PFTDEVLY"
BASE COUNT         2896 a         2115 c         1487 g         3623 t
ORIGIN      
        1 tatagcttca gaaaatagtg aatttattat tatttatcca attaagggcg tcacaaaaaa
       61 aagaacttta atctatatta ggaatattaa aaacttagaa gcaattgaac gcggagagaa
      121 gacttaattc tccccgactc tctcttacgc gatacttcct cttttacacg ttcgtaaaca
      181 tctttattat tacaagtctg attctttgat gaatgatcca ttaatcgtct taccttttct
      241 atccttaatt tcgtcataag cagtttgcaa acattcatgc aacgtaaaat catgttgttg
      301 cgctaagata atcaaagtaa cgactgcatc acctattcca tctttcagcg cttctatatt
      361 ttcgcgagtg agagcagcag ctacctctcc tgcttcctca taaaacttca acgcttgtct
      421 atccggatta ccattgtgta aatttttatc aatactccat tgttcaactt gtttaattaa
      481 ttgattcatt ttgttgctcc tcttctgatt ttttgaaatt atgcatagtg tcatcttgtt
      541 catcctcctc atactccact aaaatataag cacgttcttt attatttaca ttccaaaaca
      601 aaccgtttgt gtaacctaca acttttgcat ctggatggat tttaacgaat tcctcaagtt
      661 gttcctccgc tgataaatcg caattatcat agtctttgaa ttctttaaat cttcgcattt
      721 caaaatgcct cctctaagcc aataatctca gcgattgtat gattatcacg taaaaaagtg
      781 tcgtcatgct caaatctata gccctcatct tccaatcgct taaatacctt atttttatct
      841 gtgtaataca catcatctgc atgcgtatta aatacaccag taaataactc ttttgaatat
      901 aaaatcacat aaatcattta cttttcctcc actaagtccc aataatgtat tcgtctccgt
      961 ctttaattac tgaaacatct tcatcgccat aatcacggca aaatttgata agttcataag
     1021 cgtctgtttc gcctgtatct tcgacaagct gttcgataat ttctgcaatt acttcttttt
     1081 tagtctccat aacaaaattc atgaggtacc tcctgtattc ttaaaataaa gtctttaggg
     1141 tcttcatttt ttcgagtagt tctgttatac aaatccctta tgcaatattt acaatcttta
     1201 ataagaatgc tatagccgta tacaaacctt tcaacaacat cagcattatc aaatagcaac
     1261 aatatttctt ctatattgaa gtcacatctc tctaacaaaa tcgtgccgtt ttctttcgtt
     1321 ttacatgttc catctgaatt caagtaagtt ttatcaacgc ttatattcat tcgccgcttc
     1381 ttcccatttg tcataagctc gtttcaaata ccatctcgcc ttttccaagt cttctttacc
     1441 ggccttacga tttgctctac tgatatactt gattgcattt ccgattgaga atgcaatcgc
     1501 gggtggataa tcttgaataa cttgttcgat ataatcaatt acttcaacat ctccataagt
     1561 gtaatgttgt ggatgattca caaaatctgt cgttgcttca ccattattta catccatgtt
     1621 tatcactcct aaacgatttg atcgcgtcca tataaatcct ttttcacttt cacaaagctc
     1681 gacctattaa ataaatactt acaataattt ccgcgcttat gctgttgctg cactgtcttt
     1741 aaccatggtt ttcgatgtag ttgcttttct tttttgtatc taatgtaggc cgcttttgaa
     1801 ctagcctctt gtaactcacg aattagctta ccatcgtaat ttttaggctt cgggagcgtc
     1861 gcatcatcaa cacataatgc ctcttcaatt gttgcacctc ttcttaactt ttgagcgata
     1921 ataaatacag ttaagccttt ttcttctaag cctttaagtt ttgtataagg gacttttata
     1981 atctctgtgc ctcttttaaa atggtatttt atatcatcgc ctggcccttt aaagttaacg
     2041 ctcaatttat gtgcaaggtc cgcatcccac ccgtcgctaa tgcgttcagt cacgattttc
     2101 catgttaatg ttttattctt aatcaatgat gtcacctaca attaatcttt catataaaat
     2161 ggcgatgtaa agccgtcgct gtttagattt aagccctcag cccatttaac cggattactc
     2221 ataatttttt cgatttttgc taatccgtta ctattttgag gtatctcaat aatcacctca
     2281 tcatgcacat gtccaacaat attaaatccg gccttatcaa gccttaacat cgagacagcc
     2341 aacaaatctc tagcagtagc ttgcacaatg ttttcaacca gtttaccgcc atacgttttt
     2401 aatttggccc attttctatt tatgtctaat cccatatact caacaactgg agcgccccaa
     2461 tcgttctcac ttatcctagc tttagggtat gcaagcgagc ggccgcttgg tatttctatc
     2521 attaagagac ctttttttat atagaagcga agcccatgcg tataatgcgt ttttctagaa
     2581 cgcactgtat tgattgcagc gtcttgacaa gccttccaaa aattgacaat attaggattt
     2641 gcttttctcc agctatccac taagccttgt aattcggatt cattaatccc catgtctaaa
     2701 gcacccatcg cttttaacgc tcctggtcca ccttgataac ctaaagcaag ttctgagact
     2761 ttgccttttt gcctgagagg gtcacctttt gtaatcgatt cgataggtac accaaacatt
     2821 tgtgcagctg acgcctcata tatcttgccg tgagtgttaa acacgtccaa ccgccattgt
     2881 tcctttgcat accatgcaat gacacgtgcc tcaatggctg aaaagtcgct cactgctaac
     2941 tcatagccat ctttagccac aaaagttgta cgcaccaact gactcaataa atcttgtggt
     3001 ggcgtagcta ataacaaact tagatcgtca aaacgttgtg ccttgataaa atcacgcgca
     3061 atgtctaact ccacggcact catgtaatgc tttgttaaat tttgcagttg tacgcctcta
     3121 cctgcccaac gtcctgtact agcaccataa aactgaaaca aaccacgcac acgttcatct
     3181 acacacatca tatcgtgcat cttgttatac tttttaacac ttgtttttga tatttgaaga
     3241 cgaacttcga gcatttgttt agcctttcca gtagcccttt ttaaatactc ttgtactgtt
     3301 ttcttttgta agtttggtat gtcgagtccc tgttcttcat tcaaccattt aagcaattgg
     3361 cttgtgctgt tagggttttc taatcttgta atttgaatcg cttgttttaa caaatcttct
     3421 ttactcatct tatctaattc atttgcaccg agcatcaact cttttgacaa cttgatgcct
     3481 ctgtcattaa tacgttgatc tagattccaa tatttttgct cttcttcagt aacaggaaag
     3541 tctttagtct tcgtggcaat agacatttct acctcaacat ctcttatgca gtaatcaata
     3601 aactgctgcc acttcacagg gtcatgttgt ggtaggtttc ttgttcgtcc tccgttaact
     3661 ttagtgggct tacacggtac tgaaaaatat ctgatgaggt ttttacctgc cctatctttt
     3721 tgattctgca aattcagcgc attccctact ttttcaagcg aagagggtaa accaagacga
     3781 gtagcattga ccatcgtgca agaccattcc tcaggaggca tgtcagcatc aaaatgttta
     3841 gctaaacatg tacgttcaaa gtttgcatta aatgcgtgtt ttttaacgtt tgggtcaaac
     3901 aacgcaattt taaaggtttc atatgaagca tgaaactcag tatcatctag catcgtcata
     3961 tcaatagcac tcactgaacc accatctatc gaataagcaa taattagtat ttcaaaatct
     4021 ttcgcttcaa catacttata aacgccacat tttaagatgt cattactgct gtatgtttct
     4081 atatcaatat tcatgtactt caagactgta tcacctcagt tcaagtaaaa agtaaggggc
     4141 ttaacagccc cacgtactac aataaatcgt catcatccgt atcaatttca tcgaagtcat
     4201 cttcagcgct actcgctccg cctaatggtt cacctttttc aatcaattga atattgttaa
     4261 gacctgcagc aatcccctta tttccacttg tattaaatgc gtacatattg attgacgctc
     4321 taatgtaatc accactgaca accgtacttg attcggttaa tcgaatcttg ttttggtcga
     4381 ctattccagg tgcattttta ctagaagcat tgataaagta cgcaccttga taattagggt
     4441 catcctcacg ttcaacatca ccgtcacgta aaggcgtctt taaattagca ggtatcttgc
     4501 ctccaaattt cgctttgccc gcttctttag cttcttcaat agccttttta atcgcttgga
     4561 ttgtacttgt atcagtttta ggaatgatta agctcactga atatttagca tcttgccctt
     4621 cctgcatgcg atgaggttca aaaatgtgag cgtaagaggc acgtactttc ccagtaataa
     4681 cttttgttcc aattaatttt gctttcataa atgattacca tcctttaatt aaattttgtc
     4741 gaactcgtct tcagcagact gtataattgc ttttcgttta tccgtttctt ttgctaatgt
     4801 cactttgcct ggtggcttat caatgtaatc gcctaccaat ccgttaaatg cttttttacc
     4861 tatcaatttt tcaagatttg taatacttaa aagctttgtt tctgttatgt tttcaacttt
     4921 atgcccttct ttaatcaacc tgtcttgtat agcttgagta tctgtcatga cacgtcttga
     4981 acgcccttct actagtttcc aaccatcgta agactttcca tgctcgagca tttgttcaag
     5041 tgcataactc tcgacttctt ccgcccactt tttgatgaaa ggcactttat aaagcagttc
     5101 agcgatttca tcatcactta ataaatgtgc aggtgtatca ggaacgtctt gcataaactc
     5161 agcacgcgca cgacaagaat gtttaatttt acaaaacata caatgctcac ccgccttgaa
     5221 ctcaccttca cctttataag caagttctgc tcttggctta acatagtccg taccccatgc
     5281 aaccaatttt tctgcattca tctcttctgt agaaaagtta tcaagtcgag gctgaacaat
     5341 tgtcatttta acggtgtgca cgtcctccaa aatgctgagt agctcataag cgcctaatcc
     5401 ataaagtctc aattgagggt tatcgatagc ggaaacctca acacccttac caaatttaag
     5461 gtctatgatt tcaagcacac cagccgcata cacaattaca tcaccagtcc caaacgattc
     5521 agggacgtac ttgcctaaat caagtctcgt ttcaaacatt gtgattacat ctttatctcg
     5581 agcttttgct tcatttacac gttcttcaac catatcaaca tattgctcga cgtattcacg
     5641 taattcttcg ctgtaatact cgttatgctt ataatttgaa aaagctttat taaactcaat
     5701 ttctgtcaat cctccatatt tacgactgaa atacaactca cttaattcat gtgcaaaagt
     5761 gccttcctca gcaaatatgg acgttctatc gacaatacct tcactcgctt taatgctagg
     5821 cggacagtta agccactgct tagcaccgct cgcgctcaat ttggcatgcg ctcgattcgt
     5881 atgatctaac ttcatgagcc tattctcgct ttcaagtatt cgacgatttc agggaaatgc
     5941 tctggcgcga gtagcgataa tttatcagcc cctagctcag taagcttact ttttaaagcg
     6001 tctttctctt catctgcaac agtcatcaca aactttttac ctaatgacat tacataatcg
     6061 cgtgtaaatt cttgagtcgg tttatccgct tctttaggta ctgcaggacc ctcatcaaca
     6121 ctctttttga tattagattc tttagtagtt gacggttcca tgtttgccac acttaaattt
     6181 tgatttaaga gttttaactc ttccaaaatc gcttctaaaa ttgccatgtt gcctcactcc
     6241 ttaatttttt gatacactta atgtagaatt ttttattatt tcgactgatt cctagtggca
     6301 gctagttatc agtctttttc gttattttcg acataatttc gacataatca cgtaaacttt
     6361 ttattgcaat cgtagactct acaatttttt taaagttatc cgcagtaact aacatgttaa
     6421 ctatcgatga aggcttacct acgacaatct gattaaaaat gttctgtaca actcccttat
     6481 caagcgctat tccagtaatt agagatatat taaaatccgt ttcttcatct acttttacga
     6541 ttaaatcgta taactcttta gattttgacg ttaccacttc aataatttgt tcttcattca
     6601 tgtttttaaa atccatttta aatttcctca ctttcgatat ttttcaaaaa atacttagtt
     6661 aagttatatg ctgcaatctc tatcaaaatc actaacacaa acaatgtcgt aaaatacaca
     6721 ccactgagcg ctaaaagcaa cgttgatata aatgcagcag ctgctgtcac aaaccacgca
     6781 attaaacttt tcatgttaat cacctccttt tgatttgatg atttccgaaa agttttcatc
     6841 tataaatcga ctcatctttc tagcattaaa acgccaacga ttgaaacttt catcaggata
     6901 atgtgcgatt cctaactttt ttaattgctt ttcaaattta ggattatata aaaatttggt
     6961 ttttatagtg tcatcagaag acatctttaa tttctgtttt aaatctttta aatcccaaac
     7021 aggatcatta gctaaatctt ctaactctct gaccttgtct ttttcgatga gcacaaagcc
     7081 atctggaatt ggtacagtga cttgtaaggt ttgcaccatg ttagccacct cctttattgc
     7141 ttattatttg aattaactgc tattgaaata attgatagag taattgccaa aatacttgcg
     7201 attaaagaaa acatgtttat cctcctttcg caatcaatat aatccttgtg cggtctaaca
     7261 ctaaatgttg aatcgtctta aaaaacgtcg taaactcgag ttagacacat ttttatggct
     7321 gaaattgaca tttttaacgt cttatctgtt agttacgaca ttactttttt caatacttgg
     7381 taggatacct ttgtttttta gtaactcata aataaacaaa cgacctttct gcgtccactt
     7441 agtattcata cgtacagatg tacttccgtc tttatgctca atctctgttg ttgatgaatg
     7501 agtgtatcct ttgtcatgca aatttgaata aagtaaccat tgacccgact gtttgtactg
     7561 tacttttaaa tcatgtaata acttgttaag tgcctgtgcc gacattccat aatctttagc
     7621 gatttgccct actgtcacta aacttttgtt attcaagatt gtgtctagat atgacgcttt
     7681 aggttcgtat tctgcaatct tttgcttttg catgttgttt tctagttcta gcttttcatt
     7741 gcgttcaact gtttctaata attgagtaag tgcttcttta taagttccag gcaatctgtt
     7801 ttgaagtgcg ttttccattt cattgaattt gttaatgtaa gccattttga actcgttgtg
     7861 accttgaatg ttgaacatgt aaagagtaaa gccatctttt gttagtaggt attctctgtt
     7921 tttctttccg tttttagctt tatattgatt tggaataaat agagccgaaa tatcggccgt
     7981 actatttcta gcaacctcat caattccttc taatacatgt ttgtgttgtc tacctaattc
     8041 attcgctaca actcgactag aaactactgc tcctaattct gaattgtttt cgattttgat
     8101 ttcttgtaat acttgcattt ttaatatgct ccttcctttt aaacggtctt aaaatcagaa
     8161 atgatttaag aatttaacct tcgtaataag cgttgagcat gcgagctagt accttgcagt
     8221 cctcttcgct tatatcgttt tcaacgaaaa aaagttgaat ttttaaaaat aatactggaa
     8281 tacgaatacc ttcaaattca tctttagtta gcgacctcaa atctatcttt ttctcttcca
     8341 tagtagtccc tcctttaagt tgcgactttt tctttttcta ttcgaaatct tcaatagtca
     8401 gctttgacaa acgctttttg taaagatgta aataaaaact ttttattttt tcgtatagtt
     8461 ccgctgcttc ttcgtattca cttttactta aatcagaatt aagagttacg ccgaatgctg
     8521 ataatgtaag ttttcttatg tggtcatgaa cttcttgaac aaatacctta cgatgtacca
     8581 attcaaatcc acttttgtat ctttttattg gaataggatg attcaacctt tccattcttc
     8641 ctactgataa atactttgcg aattcgtact gtttgttaat tctttcaaag tcatcgtgtt
     8701 cgattctcac ttcattaaaa atagaacccg aaccaattgg tttcttacct cttatagtct
     8761 ctctaacttc tttcgctata atttctttta attcctcttt agttaatgtg atttgttcca
     8821 tagctgcctc cttattttta tagttgtcac tttcgaaact taaaatttaa aaaaaatcat
     8881 caactttaac atttaaatgg tctgctaatt ttttagcttc tgaagttgta aaatctctac
     8941 cattaattcg atttatcttt atactcaata aacttctact cattccaatc gccttagcaa
     9001 cttctttctg gttagtgcct ttaagtgcaa tcaagctttt tatttttaag tatggtttat
     9061 ctgctacgct cgttgtcatt taaccccctc ctttttgttt cgtttgtgac aacttaattt
     9121 aagaatacat tataaaagtt tcgatgtcaa caacttttac agaatttttt ccttgcgttt
     9181 cgttttcgaa actcttataa tgaacttatc ttatataagg aggtcttcat atgggcattg
     9241 gtgaaggttt aaagaattta agaaaaaata aaaatatgac tatggaacaa ttagcgactg
     9301 accttaataa taaatatcct gacctaatga aactgacgaa aggtaagatt tcaaaatggg
     9361 aaaatgaaaa ggaagaacct cgattatcaa cagccaaagt tttagctgag tacttcaacg
     9421 taaagattaa tgatttgtat agtgaagcaa gtactacata taaagatgaa aactcaatca
     9481 cttccatata cgacaaactc acacctcccc gtcaaaaacg tgtactggac tttgctaatg
     9541 aacaattaaa tgaacaaaat aacaaagttt tacatatcaa ttcgaacaac atcgtatcag
     9601 aagaagttgc cgtttatggt tacgcttcag ctggtacagg cgaaacgtta attgacggtg
     9661 tagagttcac gacgcagtac aacggacaca tacctaacca cgactttgca ttgcaagtta
     9721 acggtgattc aatggaacct atgtttgaag ataaagagat tatctttatc gataaaacaa
     9781 agcaaatcaa cagtggtcaa attggtatat ttgtcattga tggtgaggct tatttaaaaa
     9841 aggtgtttat caatgaagaa ggtatacgtt tggtatcttt gaattcaaaa tatcctgatc
     9901 tattctttga taagaatcac gatattaaag tagcaggaaa agttattttg taggaggatt
     9961 gtttatggaa aagaaatttg gggttgctgc catattagat gaatacacaa taattataaa
    10021 tgccggaaaa tcagatgatg ttagtgaagg agattcactt tctatactct ccgatagcac
    10081 tattgaaata aaagatccct tcaccgatga agtattgtat g
//
LOCUS       DANHPA010000089        10070 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.089, whole genome shotgun sequence.
ACCESSION   DANHPA010000089 DANHPA010000000
VERSION     DANHPA010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 10070)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10070)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10070
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.089"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(235..654)
                     /locus_tag="PTC28_001853"
     CDS             complement(235..654)
                     /locus_tag="PTC28_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002503427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ohr family peroxiredoxin"
                     /protein_id="HDK5717127.1"
                     /translation="MGIIYQTTATNTGGRKGHVQTDDNKLEFRLAPPDNAKEDETNPE
                     QLFATGYASCFNGAFDLILKRNGFRKAEPVVDLTVKLMDDPNSESPMLGVDIQAKVKN
                     MSQEDAEKCLEEAHAFCPYSKATNGNIEFSMNVTVED"
     gene            803..1807
                     /locus_tag="PTC28_001854"
     CDS             803..1807
                     /locus_tag="PTC28_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HDK5717128.1"
                     /translation="MTKILVFDVREDELPALEQWKAAHQDDVEVELIEAQLDASHLVK
                     LADVDGISISQTTQFDSQFYKVLAKNGIFHIAQRSAGYDQFDLEAANLENIKISNVPS
                     YSPQSIAEFAVTRTLELVRHTAQIDRNMAQNDFTWNLNLQGRTVESLKIGVLGTGRIG
                     SRAAKIFKGFGSEVLAYDIAPDKALNDVVTYVDSLETLISQVDVLTLHIPGSKENHYL
                     INEDVLKQAKPGLLLINAARGSVVDTTALIRSLEAGHVAGVAIDTYENEGAYFRHDWG
                     GRELEDETLKALLNHEKVLLSPHVAFYTDEAVKNLVDIPLDDVLSFIRTRQAENIVNP
                     "
     gene            1828..2553
                     /gene="aroD"
                     /locus_tag="PTC28_001855"
     CDS             1828..2553
                     /gene="aroD"
                     /locus_tag="PTC28_001855"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HDK5717129.1"
                     /translation="MKTQIVASLMPLSPTLTPEELHDIERYANDFDILELRIDGIPNC
                     EIAVVEKMVQQIVALPVTFELLVTYRTSQQGGKGVLSTDGYLQLLRQLASLDKIDFID
                     IEWEPDQDVRRQVVEAIHQGGKVSIASYHNFEMTPTIEVLKKTYYHMSKLGANHLKVA
                     VMPKTRQDVLTLLQALSEANEALQQWVTGISMGQLGLISRTAQNTFGGALSYGALSDS
                     IAPGQLHVQTLAQVLPLYSLFES"
     gene            2608..3153
                     /locus_tag="PTC28_001856"
     CDS             2608..3153
                     /locus_tag="PTC28_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HDK5717130.1"
                     /translation="MELQEAIKSRRSIKKFERDMYIDESALKKAIYEAADAPNHGMRE
                     PWRVVYVPKHKLGEMSREVSRYAFPRDHEKQQSHYDAVTNLGGFLAIVMKCDARQREE
                     NENYLAVGAFAQNLLLLLYEKGIGTCWKTPEYIFKPKVRAAFGVGPDEKLIGFLYLTD
                     LKEEDKFRKVPRKNKAMITEF"
     gene            complement(3283..3603)
                     /locus_tag="PTC28_001857"
     CDS             complement(3283..3603)
                     /locus_tag="PTC28_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDK5717131.1"
                     /translation="MQSITTMDAFNQVIQSNEPVIIKFEAGWCPDCRAMDMWIDPIVE
                     KYNQYEWYAVNRDELEDAATQYEVMGIPSLLIFQNGEKLHHLHSANAKSPEQVESYLA
                     ESLG"
     gene            3887..4243
                     /locus_tag="PTC28_001858"
     CDS             3887..4243
                     /locus_tag="PTC28_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002479305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase family protein"
                     /protein_id="HDK5717132.1"
                     /translation="MIKFYQYPNCTTCKKAAKFLSDNGVSFEPIDITQHTPTKEEFRQ
                     IIQKSDLEIKKFFNTHGAKYKELNLKDRLGEMSDEEKLELLASDGMLVKRPLAVSGDT
                     VTVGFKEADYRDIWVS"
     gene            4317..4697
                     /gene="gcvH"
                     /locus_tag="PTC28_001859"
     CDS             4317..4697
                     /gene="gcvH"
                     /locus_tag="PTC28_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HDK5717133.1"
                     /translation="MAVPSGLKYSKEHEWVKVEGNTAIIGITDFAQSELGDIVFVELP
                     EVEDELTEGETFGSVESVKTVSELYSPVSGKVVAVNENLEDAPEAVNESPYEEAWMVK
                     VELKDESELDALLDAAGYEKMIGE"
     gene            4776..5171
                     /locus_tag="PTC28_001860"
     CDS             4776..5171
                     /locus_tag="PTC28_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HDK5717134.1"
                     /translation="MTIIHKVIVVEGKSDKKRVQEVLLEPVEIICTHGTMGIEKLDNM
                     IEYLYDKQVYILVDADAEGRRIRKWFTTYLSESTDIFIDTKYSEVARCPRDYLSNVLQ
                     HFDFKVKQDFYVKGKYSYHECFKAIEQYI"
     gene            5137..5454
                     /locus_tag="PTC28_001861"
     CDS             5137..5454
                     /locus_tag="PTC28_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDK5717135.1"
                     /translation="MSVSKQLNNISKHFDQSVHLIFGYTPMCGTCKIAERMLDISNEI
                     TQLPIVKLDLNYHPEWSQEKEIQSVPILIIMRYDQEVERLYAFHSVPYLLEKLKKVID
                     DSE"
     regulatory      5492..5601
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            5697..6725
                     /locus_tag="PTC28_001862"
     CDS             5697..6725
                     /locus_tag="PTC28_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HDK5717136.1"
                     /translation="MITLKNIVKKYESKTKSVTAVDGVNLEIEKGKIYGIIGFSGAGK
                     STLVRLFNHLEKPTSGEVIIGGDNIGQLSPDELRRKRQKVSMIFQHFNLLWSRTVLEN
                     IIFPLEIAGMPKNEAKRRAQELISRVGLQGREHAYPSELSGGQKQRVGIARALANDPE
                     VLLCDEATSALDPQTTDEILDLLLQLKTEKNLTIIMITHEMHVIRRICDEVAVMENGR
                     VIEEGKVSHIFEHPQHQVTRRFVQEDLKPSDDSEDLAKTFKLDKDEVLAKLIFSGENA
                     THPVVSHLTQKHGISVNILEGNIKHSKTGTLGYLLLHIEQFSSINFDQIQAELRAQNV
                     EIEVVSHG"
     gene            6718..7413
                     /locus_tag="PTC28_001863"
     CDS             6718..7413
                     /locus_tag="PTC28_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5717137.1"
                     /translation="MGKSFSEILQEMITMPNVRWPDVWEATYETLYMTVISTAFSFVL
                     GLILGVILFLTSKSETKIGRVFYNIVSFVVNLFRAIPFIILILLLIPFTSLVLGTISG
                     PTGALPALIIGASPFYGRLVEIALKEIDKGVIEAARSMGATTWNIVLKVLIPESLPAL
                     ISGITVTAIALVGSTAVAGVIGAGGLGNLAYLTGFTRNQNDVILVSTILILILVFLIQ
                     FLGDWITNRIDKR"
     gene            7433..8254
                     /locus_tag="PTC28_001864"
     CDS             7433..8254
                     /locus_tag="PTC28_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDK5717138.1"
                     /translation="MKRILSIIVILALAIGLAACGNKSAEKKDDKKIVVGASPAPHAE
                     ILEQAKPLLKDKGYDLEIKTINDYTTPNKLLDAGELDANFFQHTPYLDTEKKEKGYKI
                     ESAGDVHIEPMAVYSHKYKRLKDLPNGAEIFVSNNPAEQGRFLKFFVDAGLIKIKDGV
                     KIQNATFDDIVENKKDIKFNSKQAAEFLPKTFQNDEGDAVIINSNFAIEQKLNPQKDS
                     IAVEKGEDNPYANLIAVKEGHKDDEKIKALMEVLHSKDIKDFIKKKYDGAVLPAE"
     gene            8383..9201
                     /locus_tag="PTC28_001865"
     CDS             8383..9201
                     /locus_tag="PTC28_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDK5717139.1"
                     /translation="MKKLSVLFMAIAAFVVVLAACGKGNNESDNKKIVVAATPTPHGQ
                     VAKKAGEIMKKKGYEVEIREVNDYKIPNKLLDKGDVDANLFQHVPYLKAEQKSHGYQI
                     EEVGKVLTTPMAVYSKKHKSLKDLPDGAKIYISNNPAEEGRFLSFFVKAGLIKIKDGV
                     KIEDAKLDDIVENKKHLEFDNQQGAEFLPKTYNNGEGDAVIMNSNYAIDNGLKPLKDS
                     IAVEDESSPFANILAVQKGHKNDEKYQEFLKALQSDEVRDYINKEFDGAVIPAK"
BASE COUNT         3438 a         1560 c         2082 g         2990 t
ORIGIN      
        1 acaagacaag ttaaagatat gatagcagtg agtgaacaaa attcgttatc atatcaataa
       61 tggtggcaca tgtgaatgat gtggttcagc attttcctaa tgaaaagagc aatcccacta
      121 tgaaagtagc attgctcttg gagattgctg aaggggtctc gattgatgag tctccaatga
      181 ttcggaaatt gagatttcac ctagtaaact ttattaatat tttaagaaaa tgacttaatc
      241 ttcaactgtc acattcatgc tgaactcgat attaccattt gttgcttttg aatatggaca
      301 gaatgcatgt gcttcctcta agcatttttc ggcatcttct tgtgacatgt ttttaacttt
      361 tgcttgaatg tctacaccta acattgggct ttctgaatta gggtcatcca ttaatttcac
      421 tgttaaatct acgactggtt cagctttacg gaaaccatta cgttttaaaa ttaaatcaaa
      481 tgcaccattg aagcatgacg cataacctgt cgcaaataat tgctcaggat ttgtttcgtc
      541 ctccttcgcg ttatctggtg gtgctaatct aaattctaat ttattgtcat ctgtttggac
      601 gtgcccttta cgtccgccag tatttgttgc agttgtttga taaataatac ccatcatgaa
      661 tacctccttg tttttaatgc ttcattctat tatttacccg atgaaatagt tttttaatca
      721 tcacaccttt tcaagataaa aagaataggc tatagttatt ttattcagaa ttaactgaca
      781 tttgtagtgg gaggaatgaa cgatgacaaa aattttagtg tttgatgtaa gggaagacga
      841 gttaccagcg ttagaacaat ggaaagcagc gcatcaagat gatgttgagg tggaattgat
      901 tgaagcacaa ttggatgcgt cacatttggt aaaattagcg gacgtggatg gtatttcaat
      961 ttcgcaaacg acgcaatttg atagccaatt ttataaagtg ttagcaaaaa atgggatttt
     1021 tcatattgcg caacgttcgg ccggctacga tcaatttgat ttagaggccg caaatcttga
     1081 aaatattaaa attagtaatg tacctagtta ttcgccgcaa tcgattgctg aattcgctgt
     1141 gacacgtacg ttagagttag tgcgacatac ggcacaaatc gaccgtaata tggctcaaaa
     1201 tgatttcacg tggaatctaa atttacaagg tcgtacagtg gaatccttga aaattggtgt
     1261 gttaggcaca gggcgtattg gaagtcgtgc agctaaaata tttaaaggat tcggttcaga
     1321 agttttggcc tatgatattg caccggataa agcactaaac gatgttgtga catatgtaga
     1381 cagtctcgaa acactcattt cacaagtcga tgtattaaca cttcatattc ctggttctaa
     1441 agaaaatcat tatttgatta atgaagatgt tttaaaacag gcgaaacctg gattgttact
     1501 cattaatgcc gcacgtggca gtgtagtgga cacgacagcg ttaatccgca gtttagaagc
     1561 aggtcatgtc gcaggagtag ccattgatac gtatgaaaat gaaggggcat acttcagaca
     1621 tgattggggc ggccgcgaat tagaggatga gactttaaag gcgttattga atcatgaaaa
     1681 agtattgctc tcaccacatg tcgcatttta tactgatgag gctgtgaaaa acttagtcga
     1741 cattccatta gatgatgttt tatcatttat tcgtactcga caagcagaaa atattgttaa
     1801 tccataaaga gaaaaggtga aacagaattg aaaacacaaa ttgttgcgag cttaatgcct
     1861 ttaagcccta cattgacgcc tgaggaattg catgatatag aacgttacgc gaatgatttc
     1921 gatattcttg agttgcgcat tgacgggatt cctaattgtg aaatagcggt ggttgaaaaa
     1981 atggttcaac aaattgtcgc gcttcccgtt acatttgagt tgctagtgac gtatcgaacg
     2041 tctcaacaag gaggtaaggg cgtattatca acagatgggt atttacagtt attgcgtcag
     2101 ttagcctcgt tagacaaaat tgactttatt gatattgaat gggaacctga tcaagatgta
     2161 cgtcgtcaag tggttgaagc gattcatcaa ggtggaaaag tgtcgattgc gtcttatcat
     2221 aattttgaaa tgactcctac gatagaggtg cttaagaaga cgtattatca tatgtcgaaa
     2281 ctaggagcga atcatttaaa ggttgcagtg atgcccaaga cacgacaaga tgtattaaca
     2341 ttgttacaag cattgagtga ggcaaacgaa gcgttacaac aatgggtgac agggatttcg
     2401 atggggcaac tcggactgat ttctagaacg gcacaaaaca cgttcggtgg tgcgttgtct
     2461 tatggtgcat tgtctgacag tatcgcacca ggacagcttc atgtacaaac gttagcacaa
     2521 gtattgccgc tatacagttt atttgaaagt taaaatactg tcgtttataa ttgataatga
     2581 ttatcaataa ttgaggggta gataggaatg gaacttcaag aagcgattaa atcaagaaga
     2641 agtataaaga agttcgaaag agatatgtat atcgatgagt cagctttaaa aaaagcaatt
     2701 tatgaagcgg cagatgcacc taatcatggt atgcgagagc cttggcgtgt cgtgtatgta
     2761 ccaaaacata aactgggcga gatgagtcgt gaagtgtcac gttatgcttt tccaagagat
     2821 cacgaaaagc aacaaagtca ttatgatgcg gtaacgaact tgggtggctt tcttgcgatt
     2881 gtgatgaaat gtgacgcaag acaacgagaa gagaatgaaa actatcttgc agtcggtgct
     2941 tttgcgcaaa acctgcttct attactgtat gaaaaaggta tcgggacatg ttggaaaaca
     3001 ccagaatata tttttaagcc taaagtgcgt gcggcgtttg gtgtaggtcc agatgaaaag
     3061 ttgatcggtt ttctgtattt aacagattta aaagaggaag acaaatttcg taaagtaccg
     3121 cgtaaaaaca aagcgatgat tacagagttt taaaggggac tgtattgttt tacattgttg
     3181 aggctgcatc ttcaatcaat gtgaaggatt tgcatattaa aataggaaga ggctagggca
     3241 caattgaaag tactcctagc ctctttctac gatatttgaa aactagccta aactttcagc
     3301 caaatagctt tcgacttgtt caggtgactt agcattggca gaatgtaagt ggtgcagctt
     3361 ttcgccattt tggaagatta aaagactcgg aatacccatc acttcatatt gcgttgctgc
     3421 gtcttctaat tcatcacggt taactgcata ccattcgtat tggttatatt tttcaacgat
     3481 tgggtcaatc cacatatcca tcgccctaca gtcaggacac caaccggctt cgaatttaat
     3541 gatgacaggt tcgttacttt gaatcacttg attgaatgca tccatagttg taatactttg
     3601 catgttagac ctctcctttt aactgataag taacgatatt ataacgaatt ttataagaga
     3661 agtcacccgt acaaattggt gaacagattt tgggacgtac agcgcacact ccaaaaatcg
     3721 ttctgaagtt aactcaaaaa gtaatcgtag tgacggtaat caatttattg ctatttattt
     3781 gttatagcgc aaaagttgta tatgttgaag tttgcatgct aaaaatacaa gcattttaaa
     3841 taataatttg ttatatttaa attaatttga acgaggaggt ttaatgatga ttaaatttta
     3901 tcaatatcca aactgtacaa cttgtaaaaa agcggccaag tttttatcag ataatggcgt
     3961 gagctttgaa cctattgata ttacacaaca tacaccgaca aaagaagagt ttcgtcaaat
     4021 cattcaaaaa tcagatttag aaataaaaaa attcttcaac acgcacggtg caaaatataa
     4081 ggaattgaat ttaaaagacc gattaggtga gatgagtgat gaagaaaaat tagaattact
     4141 cgcatctgat ggtatgttag tgaaaaggcc acttgcggtt tctggtgata cggtcacagt
     4201 tggttttaaa gaagccgact atcgtgacat ttgggtgtca taaaatagtt gattgaaccg
     4261 ttgcaatgtg tcatgattaa cttgtaaccg taatcattaa ataggagggg attcaagtgg
     4321 cagtgccaag tggattaaaa tattcaaaag aacatgaatg ggtaaaagtt gaaggaaata
     4381 ctgcaatcat tggtattact gactttgcac aaagcgaact tggggatatc gttttcgttg
     4441 agcttccaga agtagaagac gaattaacag aaggcgaaac ttttggtagt gtagaatctg
     4501 ttaaaacagt atctgagtta tattctccag tatctggtaa agtcgttgca gtgaatgaaa
     4561 acttagaaga tgcaccagaa gcagttaacg aatcaccata cgaggaagct tggatggtta
     4621 aagttgaatt aaaagacgaa agtgaactag acgcattatt agatgcagct ggttacgaaa
     4681 aaatgattgg cgaataatat caaaatgaga actcctgggt aatttaatta tcaaggagtt
     4741 ttttatactc aaatattttt tagaaggtga agaccatgac gataattcat aaggttattg
     4801 ttgttgaagg gaaatctgat aaaaaacgtg ttcaagaagt gttgttagag cctgtcgaaa
     4861 ttatttgtac tcatggcacg atgggaatcg aaaagttaga caatatgatt gaatatttgt
     4921 atgataaaca agtctacatt ttagtcgatg cagatgcaga aggtcgtcgc attcgcaaat
     4981 ggtttacgac atatttgagt gaaagtactg atattttcat agatacaaaa tatagtgaag
     5041 ttgctcgttg tccacgcgat tacctctcaa atgtattgca gcattttgac tttaaggtga
     5101 agcaagactt ttatgtaaaa gggaagtatt catatcatga gtgtttcaaa gcaattgaac
     5161 aatatatcta aacattttga tcaaagtgta catctgattt ttggttacac accgatgtgt
     5221 ggcacatgta aaatagcaga acgcatgttg gatatctcga atgaaatcac ccagttgccg
     5281 attgtaaagt tagacctgaa ttatcaccct gagtggagcc aagaaaaaga aattcaatcg
     5341 gtccctattt taatcatcat gcgctacgat caagaagtag agaggctcta tgcattccat
     5401 tctgtgccgt acttgctaga aaaattaaaa aaagtcattg acgacagtga atgacgatga
     5461 taatataata atcaatcgaa tagtcagaaa actcttatcc agagtggcgg agggatgtgc
     5521 cctatgaagc ccggcaaccg tctatattat agaaatggtg ccaattcaca taaagcaacg
     5581 atttgctttt gaagatgaga gaaaagcgtt tatattgatg ctttctcttt tttctttaaa
     5641 agggaaagca ttttttattc caaatttttt aaagtagcaa cacagggagg aacagtatga
     5701 tcacacttaa aaatatagtg aaaaagtacg aaagcaagac gaaatctgtt actgctgttg
     5761 atggtgtcaa tcttgaaatt gaaaaaggta agatttacgg cattattgga ttttcgggtg
     5821 caggtaaaag tactttagtc cgtttattta atcatttaga aaaaccaacc tcaggggaag
     5881 tgattattgg tggtgacaat atcggacaat taagtccaga tgaattacga cgaaagcgtc
     5941 aaaaggtaag tatgattttc caacatttca atttattgtg gtcaagaact gtactagaga
     6001 acattatttt tccacttgaa attgctggca tgccgaaaaa tgaagcgaaa agacgtgcac
     6061 aagaattaat ttcacgtgtg ggcttacaag gtagggaaca tgcctatcca tcagaattgt
     6121 caggaggcca aaagcaacgt gtcggtatcg cgcgcgcatt ggctaatgat ccagaagtat
     6181 tgttatgtga tgaggcaaca agtgcattgg atcctcaaac gaccgatgaa attttagatt
     6241 tattattaca gctcaaaact gagaaaaatt taacaattat aatgattaca catgaaatgc
     6301 atgtcattcg tcgtatttgt gatgaagtgg cagttatgga aaatggccgt gtaattgaag
     6361 agggaaaagt gtcacacatt ttcgagcacc cacaacatca agtgacacgc cgattcgttc
     6421 aagaggattt gaaaccgagt gatgatagcg aggatttagc aaaaactttt aaattagata
     6481 aagatgaagt cttggctaaa ctgatttttt ctggtgaaaa cgcaacacac ccagttgtat
     6541 cacatttaac ccaaaaacac ggcatttcag tgaatatttt agagggtaat atcaagcatt
     6601 ctaaaacggg tacattaggt tatctattgt tacacattga acaattttcg agtatcaact
     6661 ttgatcaaat tcaagcagag ttaagggcgc aaaacgttga gatagaggtg gttagccatg
     6721 ggtaaaagtt ttagcgaaat cttgcaagaa atgattacaa tgccaaatgt acgttggccg
     6781 gatgtatggg aagcgacgta cgaaacattg tatatgaccg ttatttcaac agcgttttca
     6841 tttgttttag gtttaatctt aggtgtgatt ttatttttaa catccaagag tgaaacgaaa
     6901 atcggacgcg tcttttacaa cattgtatcg ttcgtggtga atttattcag ggcgataccg
     6961 ttcattattt taattttgct cttaattcca tttacaagtt tggtgcttgg tacgattagt
     7021 ggtccaacag gggcattacc tgcattgatc atcggtgctt caccattcta tggccgttta
     7081 gtggaaattg cattaaaaga aattgataaa ggtgttatcg aagcagcacg ttcaatgggg
     7141 gcaacaactt ggaatatcgt acttaaagtg ctgattcctg aatcattacc cgcgcttatt
     7201 tcaggtatta ctgtaacagc aattgcatta gtcggttcaa cagcggtagc cggagtgatt
     7261 ggtgctggag gattaggtaa ccttgcttac cttacagggt tcacgcgtaa ccaaaatgat
     7321 gtcatcttag tatcaactat tttaatttta attttagtat ttttaattca atttcttgga
     7381 gattggatta caaatagaat tgataaacgt taatgattaa ggagaatgtg gaatgaaaag
     7441 gattttatca attattgtta ttttagcttt agccattgga cttgctgcat gtggaaataa
     7501 gtcagcagaa aaaaaggatg acaaaaaaat cgttgttggt gcttcaccag cgccacatgc
     7561 tgaaatacta gaacaagcga aaccattatt aaaagacaaa ggttatgact tagaaattaa
     7621 aacaattaac gattacacaa cgccaaacaa attactagat gctggagaat tagatgcaaa
     7681 ctttttccaa catacacctt atttagatac tgagaaaaaa gaaaaaggtt ataaaattga
     7741 atcagcaggt gacgttcaca tcgaaccaat ggctgtatat tctcacaagt ataagcgttt
     7801 aaaagatttg ccaaacggtg ctgaaatttt cgtttctaac aatccagcag aacaaggacg
     7861 tttcttaaaa ttctttgttg atgcaggttt aattaaaatt aaagacggtg ttaaaattca
     7921 aaatgcaaca tttgacgaca ttgtagaaaa taaaaaagac atcaagttta atagtaaaca
     7981 agctgcagaa tttttaccaa aaacgttcca aaatgatgaa ggcgatgcgg taatcatcaa
     8041 ctctaacttt gcaatcgaac aaaaattaaa ccctcaaaaa gattcaattg ctgttgaaaa
     8101 aggtgaagac aatccttatg caaacttaat cgctgttaaa gagggccata aagacgatga
     8161 aaaaatcaaa gctttaatgg aagtgttaca ttctaaagac attaaagatt tcattaagaa
     8221 aaagtatgat ggtgctgtat tgccagcaga gtaaggtgag atgcacaaat atttaatatg
     8281 aaataaaaaa acaacatgtg gtgtgatggg gaaagtcatt caaatgggct aaactttcac
     8341 accctaatca tttaaaatag gtcagatggg agaggaatgt atatgaaaaa attatctgta
     8401 ttattcatgg caattgctgc attcgtagtt gttttagcag cctgtggtaa aggaaataat
     8461 gaaagtgata ataaaaaaat cgttgttgca gcaacaccga caccccatgg acaagtcgct
     8521 aaaaaagctg gagaaatcat gaagaaaaag ggctatgaag ttgaaattcg cgaagtcaat
     8581 gattataaaa ttccgaacaa gttattggat aaaggcgatg tagatgccaa cctttttcaa
     8641 cacgtacctt atctaaaagc tgaacaaaag tcacacggtt accaaattga agaagtaggt
     8701 aaagtgttaa caacaccaat ggctgtatac agtaaaaagc ataaaagctt aaaagactta
     8761 ccagacggtg ctaaaatcta tatttcaaac aatccagctg aagaggggcg tttcttatca
     8821 ttctttgtga aagcaggcct aatcaaaatt aaagatgggg ttaaaatcga agacgcaaaa
     8881 ttagatgata ttgtagaaaa caaaaagcat ttagagtttg ataaccaaca aggcgcagaa
     8941 tttttaccaa aaacttataa taatggtgaa ggtgatgcgg tgattatgaa ctcaaactat
     9001 gcaatcgata atggattgaa gccgttgaaa gattcgattg cagtagaaga tgaatcatcg
     9061 ccgtttgcca atattttagc tgttcaaaaa ggacacaaaa acgatgagaa gtatcaagag
     9121 ttcttaaaag cattacagtc agatgaagtg cgcgattata ttaacaaaga gtttgatggt
     9181 gctgtcattc ctgcgaagta atattttggt tcgcatatta tatacaatga gttggagaaa
     9241 taggatgact atttaaaacg ggtgacactt ccaggatcag ctgaagtctc aacgcgattt
     9301 gtcaatatat cgttattatt ttttatagaa ggcagatggg cttttcgggg gcagtacaga
     9361 aatcttatat gacacaaaga tttcgtcgta ctgcccccta aagactggct agaatgctca
     9421 aatgtgaaag cattgagaag tccagacagc tactgcgtta aagaggagcc actgataaat
     9481 taaaagggtt taatcttaat ccatattgta acgctcgtga gtctcgttcg tttactgata
     9541 gatttatcgt atcaaacgat aaattcatta taagtgattt caaaagtaaa actacaaaaa
     9601 attagtcaag atcaattcaa aatagcttaa taagtgataa atggtgggta ttgttatgaa
     9661 ctttcaaagt tttagattga tgaatgtaga attaaatacg gttaatctag aaaaagatga
     9721 aaatgataaa acaagtttaa gattgaatgc ggggtactac agaaattaat gattgggatg
     9781 aatttttaac ggttaatggt actgttatac tatttcctta tattagaaca ctaatttcat
     9841 cactaacaag ctttgatgac tcaacagcac acgtatgacg acctgctata aatgttaaat
     9901 ctatgtttga ataaaataaa aaaacgccac attcttaatg atggtttttc ctcaataaaa
     9961 atgatgatgg aataaaggat ttaaaaaaat taatattgca gaagaaactg atatgacttt
    10021 ttaaaattaa aaataaactt ccaaaaagaa ctattccgtt tttcttccta
//
LOCUS       DANHPA010000090         9816 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.090, whole genome shotgun sequence.
ACCESSION   DANHPA010000090 DANHPA010000000
VERSION     DANHPA010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 9816)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9816)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9816
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.090"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..267
                     /locus_tag="PTC28_001866"
     CDS             <1..267
                     /locus_tag="PTC28_001866"
                     /inference="COORDINATES: protein motif:HMM:NF022121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2482 family protein"
                     /protein_id="HDK5717140.1"
                     /translation="IIEVVTSKSKELYDLIVKVDEETDFNISLITGIALDKGLVQNIF
                     NQVVVGKPSSIVNMLVTADNFKKIVASTIAIKSLRDYVENNEKD"
     gene            354..611
                     /locus_tag="PTC28_001867"
     CDS             354..611
                     /locus_tag="PTC28_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1108 family protein"
                     /protein_id="HDK5717141.1"
                     /translation="MYFKNDREHTSILEIDGFKFRKIVIKEDSRVTIEVLDTEMNTVS
                     FMPVYDSSEIENAEEVILADVYKFIENQSDELDKIVAHFIK"
     gene            627..2573
                     /locus_tag="PTC28_001868"
     CDS             627..2573
                     /locus_tag="PTC28_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDK5717142.1"
                     /translation="MHLRLNKLTIENFAGIKEQSFEFNGHNSKIYGANGTGKTTTATA
                     LQWLLFDKGLDGSTKSFNPVPLNANNQEQYELVPTVEAEFTIGDHTLLLRKESRPKYT
                     TNQKTNRKEYSRSRTKRQYINEEPVKISDYKSRIKYVIDEDVFKLITNPAAFNNLDWK
                     KRREILFEIADPINNEDIINSNHELKGLSDLLNDHDIETKKKIVSDKIKQINKEIQDI
                     PTRINQESKGLQEVEPLNDSELKQIESEIEVLKQQRIEVRNGSKSIELKNKLIDKEAE
                     LSRLKSNHNFEIDNKIHTLTNEFNAEQSTVLNYTSKIRVHNQEIEHEEKRRKALLSDY
                     KMIETNFKELQDKQFEYIATNFCETCGQELPAEQIESVKQKALEKFNQEKAYDLEVLA
                     KRKDETLAEGKKIKPIIEKIQSEIDKYQKYVEDASKKSEKIKVEIDEFKEKQTNVTET
                     EAYRAIVSEIEAIKQEQQNIQESIAATVLMIDEQINDLYAKKSKFDERLIIIESNKHS
                     EQRIKELRTKEDNLLDEKEEYAYQLYQLNLFTTTKINMLTDNINEKFDMAEFKLFNQL
                     VNGELEETCITLVDGVEYSGGLNNAARINVGLDIINTLCKHYNVTAPIFIDNAESVTN
                     VINTDAQQIQLIVSEDNRELVMKC"
     gene            2567..2767
                     /locus_tag="PTC28_001869"
     CDS             2567..2767
                     /locus_tag="PTC28_001869"
                     /inference="COORDINATES: protein motif:HMM:NF024252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDK5717143.1"
                     /translation="MLKNKIALNIRAYRKMCKLTQSELASRLKTSRQHISEIECCKRG
                     LSIKMLEKIAKKLHVEPYQLLK"
     gene            2781..3695
                     /locus_tag="PTC28_001870"
     CDS             2781..3695
                     /locus_tag="PTC28_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000180600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecT"
                     /protein_id="HDK5717144.1"
                     /translation="MSNELMQRVEAQLLEEKNVSDNVLNKVRVLEAQGNLELPADYSP
                     SNAMKQAWLQISQDNKLMACNDASKANALLDMVTQGLNPAKSQCYFIPYGNKMQLQRS
                     YHGNIMMLKRDAGATDVVAQVIYDGDTFKQELDSVGRIKSIKHEQDFFNINKDKIVGA
                     YCTIVFSDNRDNYIEIMTIDQIKQAWMQSSMIKDEAALNRSKTHNNFKEEMAKKTVIN
                     RAAKRYINSSTDEGLLQFAKESEQRQRKEVLDAEVAENANKELLDFDENEIEDAQFEE
                     VKSVDGYKDVTEVETSPANESESEEDPF"
     gene            3704..4402
                     /locus_tag="PTC28_001871"
     CDS             3704..4402
                     /locus_tag="PTC28_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009498085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDK5717145.1"
                     /translation="MATGSSGNCYRLNDGSTTLLVEAGIKFQSVQKHLKFKTRDIAGC
                     LITHEHGDHAKYIKQFMDAGIECYATLGTLKALNVTSHRLNVIKSRKVFRVGSWQILP
                     FEIEHDVAEPVGFLMKSDNGSKVLYVTDTKYLKYKFNGITHMLLEVNFIYEQMQQNVE
                     DGVIHQALANRIMDSHFSLEYATQFLKANDLSELQEIHLIHLSSNNSNARFIKEQIQA
                     VSGVTVYVGGYKDD"
     gene            4395..4856
                     /gene="ssb"
                     /locus_tag="PTC28_001872"
     CDS             4395..4856
                     /gene="ssb"
                     /locus_tag="PTC28_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000609607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDK5717146.1"
                     /translation="MINRVVLVGRLTKNPELRHTQSGTSVCSFTLAVNRTFTNAQGER
                     EADFINCIALKKTAENIINYLSKGSLAGVDGRLKSRSYENKEGQRVYVTEVICDSVQF
                     LESKSTNSNQSQGGIASGQYQPKANHVAATSQNPFVNMNDSIDISDDDLPF"
     gene            4871..5278
                     /locus_tag="PTC28_001873"
     CDS             4871..5278
                     /locus_tag="PTC28_001873"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717147.1"
                     /translation="MRLNNVKLSELGQGALQELFESELEKVIENINDINTDPTKKRKI
                     TMTIDIKSDEYREIIFADAKVKSNLVSMDSTGIKLFNIVDENGERVVNELRSGAKGQA
                     FIDDDGSIKNDDGSDIDEKSKTKKTSKVHQIYR"
     gene            5294..6013
                     /locus_tag="PTC28_001874"
     CDS             5294..6013
                     /locus_tag="PTC28_001874"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717148.1"
                     /translation="MIKEALAYLKNEFKKTEFYEVGKETYANENLQKIEEPVRREVVV
                     YSLSGLVDYIKDNFDNDERLLVSVLNQQKIVVETQLNNNKKREIVIMSLAYTPTICLD
                     QFMSLEAFNIQLQSIFVKNDDVKNLLRILGNLRSSNIRNAGDNGVSQIVETKRGVTMA
                     QEEVVPNPVRLKPFRTFTEIEQPESLFVFRLRESGNEIQAGLFEADGGAWKNVARLSI
                     KDYLIENLKEQIENNSILIIG"
     gene            6065..6829
                     /locus_tag="PTC28_001875"
     CDS             6065..6829
                     /locus_tag="PTC28_001875"
                     /inference="COORDINATES: protein motif:HMM:TIGR01446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaD domain protein"
                     /protein_id="HDK5717149.1"
                     /translation="MAGWISLHRSIEEHWTFKEKRKFSKFEAWIDILLMVNHKDKKIA
                     LGNELIVVKRGQKITSIRQLCERWHWSNNKVKNFLKMLEDDGMLNVKSDAKKTLLTVV
                     KYDVYQSQNLEMRRESDANASQMHHESDAKATRMHTNNNDNNVNKENKENKDNKRQSV
                     FSFYQENGFGVLRPYIADQISGWLDDFENDGEEIVIAAMQEAIKNNVLTWNYVNGILK
                     HWTKDKVKSIEDIQTLINQHRKQKDEFDNSQYRDLF"
     gene            6844..7626
                     /locus_tag="PTC28_001876"
     CDS             6844..7626
                     /locus_tag="PTC28_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019236202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDK5717150.1"
                     /translation="MKSIQQLAAKIKSKSKIVEQKLNVKCEKCGQSYDYVKFDNGQIV
                     KNGCDCEMKALARKQTANYHKKINRIKVNKVFSKSIINDDLKDATFDNYEPTNKDLDK
                     AKQLCMRYANNFDIDNKQSLMLYGSFGTGKSHLSMSIVKVVKAKGYSVLYMNVPQLIT
                     TYKSTFNNSEMTERDLDKIIAKVDLLVLDDYGTTLSNFGVSKMFEVMESRTGKHNIIT
                     TNNPAKELTTNKDYSKLFSRIMKNTTIVKMNGEDYRLRGVRF"
     gene            7790..7996
                     /locus_tag="PTC28_001877"
     CDS             7790..7996
                     /locus_tag="PTC28_001877"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717151.1"
                     /translation="MSPEVPLYNSEGNKIGSYVKLGNLKVRVYGLYTAYGFDQFILTT
                     NEFEKIKTRFGLSIKTQTDIFEFL"
     gene            8146..8397
                     /locus_tag="PTC28_001878"
     CDS             8146..8397
                     /locus_tag="PTC28_001878"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717152.1"
                     /translation="MYVKHYEYVVYRGEEIICAGTKDEVITKLNTTKNTLDRIASSTT
                     EKEEAELYKKNPHHQRLIAVKIETSEIEKELGLQKVKWA"
     gene            8430..8624
                     /locus_tag="PTC28_001879"
     CDS             8430..8624
                     /locus_tag="PTC28_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001126830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717153.1"
                     /translation="MKQFFGSKRYLYQNGRKVAHIHIVNGIYHFHGHFKTKFSRLKLE
                     FKCKQDFNDYLEKHELRFKE"
     gene            8630..8833
                     /locus_tag="PTC28_001880"
     CDS             8630..8833
                     /locus_tag="PTC28_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002439178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717154.1"
                     /translation="MELSNSDRQRYRIKTSGKSPTEINKVLRKRGVRGFVVNVDPEEV
                     TMLVEKKDKRHNKECMRYMNLSF"
     gene            9086..9376
                     /locus_tag="PTC28_001881"
     CDS             9086..9376
                     /locus_tag="PTC28_001881"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717155.1"
                     /translation="MNNLIDIVQTMEHKIEQIKAERDSLINDLTNLRKQRDNYKSRAE
                     TLDNLKEYLSEARTLNIKCLEKMSEGYFKGKVAGRIQMIDELITVIRILEGE"
     gene            9377..9697
                     /locus_tag="PTC28_001882"
     CDS             9377..9697
                     /locus_tag="PTC28_001882"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717156.1"
                     /translation="MAKKHKVAVYELKDSQGEYIAKDMDIGITTNLSDAYAVWNIDGS
                     EPNLKNIKELAKAKESDWDNFYKVNYGPNAINNYKSYTWLQHCNLIIVEIDEETFNSI
                     KGEN"
     gene            9699..>9816
                     /locus_tag="PTC28_001883"
     CDS             9699..>9816
                     /locus_tag="PTC28_001883"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide pyrophosphohydrolase"
                     /protein_id="HDK5717157.1"
                     /translation="MEQLINNIEQWSTERGLHEGSPIRQFDKLVEEFGELVKG"
BASE COUNT         3886 a         1378 c         1922 g         2630 t
ORIGIN      
        1 attattgaag tggtaacgtc gaaatctaaa gagttatacg atttaatcgt aaaagtagac
       61 gaagaaacag attttaatat atctctaatt actggaatag cgcttgataa gggacttgta
      121 cagaacattt tcaatcaggt tgtcgtaggt aagccttcat cgatagttaa catgttagtt
      181 actgcggata actttaaaaa aattgtagcg tctacgattg ctataaaaag tttacgtgat
      241 tatgtcgaaa ataacgaaaa agactgataa ctagctgcaa ctaggaatca gtctaggttg
      301 aaaaatttgg aataaatttc aacctaatta taacaaatta ggaggaagta tcaatgtatt
      361 ttaaaaatga tagagaacat acatcaattc ttgaaattga tggtttcaaa ttcagaaaaa
      421 ttgtaataaa agaagatagc cgtgtgacga tagaggtttt agacacagaa atgaacacag
      481 tatcgtttat gccagtttat gattcatccg aaattgaaaa tgcagaagaa gtaattttag
      541 cagacgttta taaattcatt gaaaatcaat cagatgaact tgataaaatc gtggcacatt
      601 ttattaagta acaggagtgg agagaaatgc atctaagatt aaacaaactc acaattgaaa
      661 attttgcggg aataaaagag caatcatttg aatttaatgg ccataattcc aaaatttatg
      721 gtgcgaacgg tacaggtaag acaacaaccg caactgcatt acaatggcta ctatttgata
      781 aagggctaga tggttctact aagtcattta atccagttcc attaaatgcg aataatcaag
      841 agcaatacga attggttcca acagtagaag cggaattcac tattggtgat catacgttgc
      901 ttttaagaaa agaaagtcgt cctaaataca cgacaaatca aaagacaaat cgaaaagagt
      961 acagtcgttc acgcactaaa aggcagtaca tcaatgagga acctgtaaaa atatcagact
     1021 acaaatcacg tattaaatat gtgattgatg aagatgtgtt caaactcatc acaaatcctg
     1081 cagcatttaa taatttagat tggaaaaagc gacgtgaaat attattcgaa attgctgatc
     1141 caattaataa cgaggacatt atcaattcga atcatgaatt aaagggatta tctgatttgt
     1201 tgaatgacca tgacatcgaa actaaaaaga aaatagtttc agataaaatc aaacaaatca
     1261 ataaagaaat tcaggatata ccaacccgta tcaatcaaga atcaaaagga ttgcaagaag
     1321 tagaaccact taatgattct gaactaaaac agattgaaag tgaaatagaa gtgctaaagc
     1381 aacaaagaat tgaagttaga aacggcagta aatctattga gttaaaaaat aagttgatag
     1441 acaaagaagc ggaactatca agattgaaat caaatcataa ctttgagatt gataacaaga
     1501 ttcacacgct cacaaatgaa tttaatgctg aacaaagtac agtgttgaat tacacttcta
     1561 aaattcgtgt gcataatcag gaaattgagc atgaagaaaa gagacgtaaa gctttactgt
     1621 ctgattacaa aatgattgaa acgaatttca aagagctaca ggataaacaa tttgaatata
     1681 ttgcaacaaa tttttgtgaa acttgtggcc aggaattgcc tgcagaacaa attgaatcag
     1741 taaaacaaaa agcacttgaa aaattcaatc aagaaaaagc atatgatctg gaagtcctag
     1801 caaaacgaaa ggacgaaacg ttggcagaag ggaaaaagat taagccaatc attgaaaaaa
     1861 tacaatctga aattgataag tatcaaaaat atgttgaaga tgcatctaaa aaatccgaaa
     1921 aaatcaaagt ggaaattgat gaattcaaag aaaaacaaac aaatgtgaca gaaacagaag
     1981 cgtatagagc tattgtttca gaaattgaag caattaagca agaacaacaa aatattcaag
     2041 agtcaatcgc agctacagta ttaatgattg atgaacagat taatgatctt tatgctaaaa
     2101 aatctaaatt tgatgagcgt ttaataatta ttgaatctaa taagcattca gaacaacgca
     2161 ttaaagagct tcgcacaaaa gaagataatt tgctggatga aaaagaagaa tacgcttacc
     2221 aactttatca gttgaactta ttcacaacaa ccaaaataaa catgcttacg gataatatta
     2281 acgaaaaatt tgatatggcc gaatttaagc ttttcaatca gttagtgaac ggtgaactgg
     2341 aagaaacctg tatcacttta gttgacggtg ttgaatatag tggaggatta aataatgctg
     2401 cgcgaataaa tgttgggtta gacattatta acactttatg taaacactac aacgtcacag
     2461 cgccgatttt tatcgacaat gctgaatcgg taacaaacgt tatcaacaca gacgcgcaac
     2521 aaatacagtt gattgtgtct gaggataaca gggagttggt gatgaaatgt taaaaaataa
     2581 aatcgctcta aacattagag cgtatagaaa aatgtgtaag ttgacgcaaa gcgaattagc
     2641 aagtcgttta aaaacgtcaa ggcaacacat tagtgaaatc gaatgctgta aacgcgggtt
     2701 atctattaag atgctcgaaa aaatagcaaa gaaattacat gtagaaccat atcaattatt
     2761 gaaataatgg aagaattaaa atgtcaaatg aattaatgca aagagtagag gctcaattat
     2821 tagaagaaaa aaacgtgagt gacaacgttc tgaacaaagt tagagtttta gaggctcaag
     2881 ggaatttaga acttcctgct gactattctc ctagcaatgc tatgaaacaa gcttggttac
     2941 aaataagcca agacaacaag ttgatggctt gtaatgacgc aagtaaagca aatgcactat
     3001 tagacatggt gacacagggt cttaatcctg ctaaaagtca atgttacttc attccttatg
     3061 ggaacaaaat gcaactgcaa cgttcatatc atggaaatat catgatgctt aaacgtgacg
     3121 caggcgctac ggatgttgtt gctcaagtaa tttatgacgg cgatacattt aaacaagaat
     3181 tagacagtgt gggacgtatt aaatcaataa agcacgagca agatttcttt aatatcaata
     3241 aggataaaat tgttggagct tactgcacaa tcgtgttcag tgacaatcgc gacaactata
     3301 ttgaaatcat gactattgat caaattaagc aagcatggat gcaatcatcg atgattaaag
     3361 atgaagcagc tttaaatcgt tctaaaactc ataacaattt caaagaagaa atggctaaaa
     3421 aaactgttat taatcgagca gctaaacgtt atatcaattc ttcaacggat gaaggtttat
     3481 tgcaatttgc gaaagaatca gagcaacgtc agcgtaaaga agtgctagat gcagaagtag
     3541 cagaaaatgc gaataaagag ttgttagatt tcgatgaaaa tgaaattgaa gatgctcaat
     3601 ttgaagaagt aaagtcagta gatggttata aagatgtaac ggaagttgaa acaagtcctg
     3661 caaatgaatc tgaaagtgaa gaagacccat tttaattgat gttatcgcaa cagggtcgag
     3721 tggtaactgc tatcgtctta atgatggtag cacgaccttg ttagttgaag ctggcataaa
     3781 gtttcagtca gtacaaaagc atctcaaatt caaaacaaga gacattgcag gctgtctcat
     3841 tacacatgag catggagatc atgcaaagta tatcaaacaa tttatggacg caggcataga
     3901 atgttatgcc acgcttggca ctttaaaagc gttaaatgta actagccata ggttaaatgt
     3961 aatcaagtca agaaaggtat ttagagtggg gtcgtggcaa atactgcctt tcgaaatcga
     4021 acatgatgta gctgaacctg ttggatttct aatgaaaagc gacaatggtt ctaaggtttt
     4081 atatgtcaca gatacaaaat acttaaaata taaattcaac ggaattactc acatgttact
     4141 tgaagtgaat tttatttacg agcagatgca gcaaaacgtt gaagacggtg taattcatca
     4201 agcgctagca aatcgtatta tggactcgca tttcagttta gaatatgcga ctcagttttt
     4261 aaaagcgaat gatctatctg aattacaaga aattcactta atacatttaa gcagcaataa
     4321 ttcgaatgct cgattcatca aagaacaaat acaagcagtg agtggcgtca ctgtttacgt
     4381 tgggggatat aaagatgatt aatagagttg tacttgtagg tcgattaact aaaaatcctg
     4441 aattaagaca tacacaaagc ggtacaagtg tttgtagttt cacgcttgct gtaaatcgta
     4501 catttacgaa tgcgcaaggg gagcgtgaag cggatttcat taactgtatt gctttaaaaa
     4561 aaacagcaga gaacattatt aactatttgt caaaaggaag tttagcaggc gttgatggtc
     4621 gtttaaaatc acgcagttac gaaaacaaag agggacaacg cgtatatgtc actgaggtga
     4681 tatgtgacag tgttcagttt cttgaaagca aatctactaa tagcaatcaa tcacaaggcg
     4741 gtatagcatc cggacaatat caaccaaaag caaatcatgt cgctgctaca agtcaaaatc
     4801 catttgttaa tatgaatgat tcaattgata ttagtgacga cgatttacca ttctaaagga
     4861 ggcacatttg atgagattaa ataacgttaa attatcagaa cttggacaag gggctttgca
     4921 agaattattt gaaagtgaat tagaaaaggt catagaaaac attaatgaca tcaatacaga
     4981 cccaacaaaa aagcgaaaaa tcacaatgac aattgatatt aaaagtgatg aatatagaga
     5041 aattatcttt gcagacgcca aagttaaatc aaatttagta agtatggatt caactggaat
     5101 caaacttttt aatattgtgg acgaaaacgg tgaacgtgtt gttaacgagt tgcgatctgg
     5161 agcaaaaggg caagctttta ttgatgatga tggcagcata aaaaatgacg atggtagtga
     5221 tattgatgag aaatcaaaga cgaaaaaaac aagtaaagta catcaaattt acagataata
     5281 ggaggatttg aaaatgatta aagaggcatt agcttatttg aaaaatgaat tcaaaaagac
     5341 agaattttat gaggttggta aagaaactta tgccaatgaa aatttacaaa aaatagagga
     5401 accagtccgc agagaagttg tcgtttattc actatccgga ttagttgatt atattaaaga
     5461 caattttgac aatgacgaac gattacttgt ttcggtttta aatcaacaaa aaattgttgt
     5521 cgaaactcaa ttaaacaaca acaaaaagcg tgaaatcgtc attatgtcac tggcttatac
     5581 accaacaatt tgcttagacc agtttatgtc attagaagct ttcaatattc aattacaatc
     5641 aatattcgtt aaaaatgacg atgttaaaaa cttattacgt attttaggta atttaaggtc
     5701 ttctaatatt cgaaatgctg gagataatgg cgtttctcaa attgtagaaa caaaacgtgg
     5761 tgtgactatg gctcaggaag aagttgtacc taatccagtc agacttaagc ctttcagaac
     5821 ttttacagaa attgaacagc ctgaatcgct atttgttttt agactgagag aatctggaaa
     5881 tgaaattcaa gcaggtttat ttgaagcaga tggtggagca tggaaaaacg tggccagatt
     5941 gagtattaaa gactatttaa tagagaactt aaaagagcaa atcgaaaata atagcattct
     6001 aatcatcggc tagtgcaggg ggataattcc ccctttctaa tgcaccagat ggtgaggtga
     6061 gaggatggct ggttggatta gtttgcacag atcgattgag gagcattgga cattcaaaga
     6121 gaaaagaaag ttttctaaat tcgaagcatg gatagacatt ttacttatgg tcaatcataa
     6181 agataaaaaa attgcgttag gtaacgaatt aattgttgtt aaaagaggtc aaaaaatcac
     6241 aagtatacga cagttgtgcg agcgatggca ctggtcgaat aacaaagtaa aaaacttttt
     6301 aaaaatgttg gaggacgacg gaatgttgaa cgtaaaaagc gacgcaaaaa agacgcttct
     6361 aaccgttgtc aaatatgacg tttaccaaag tcaaaattta gaaatgcgac gcgaaagcga
     6421 cgccaatgca tcgcaaatgc atcacgaaag cgacgccaaa gcgacgcgaa tgcatacaaa
     6481 caataatgat aataatgtaa ataaggaaaa taaggaaaat aaagacaata aaagacagtc
     6541 tgttttttcg ttttatcaag aaaatggttt tggggtttta agaccttata ttgcagatca
     6601 gatatcaggt tggttagatg actttgaaaa cgacggcgaa gaaattgtta tagcagcaat
     6661 gcaagaagca attaaaaata atgtcttaac ctggaattat gtgaatggga tattgaaaca
     6721 ttggaccaaa gataaagtta aatcaattga ggatatccaa acacttataa atcaacatag
     6781 aaaacaaaaa gatgagtttg ataactctca gtaccgtgat ttgttttaga aaggagaaat
     6841 aaaatgaagt cgattcaaca gctggcagca aaaataaaaa gcaaaagtaa gattgtcgaa
     6901 caaaaattaa atgttaaatg cgaaaagtgt ggccaatctt atgactacgt aaaattcgat
     6961 aatggccaga ttgtcaaaaa tggttgtgat tgtgaaatga aagctctagc tagaaagcaa
     7021 acagcaaact accacaaaaa aatcaatcgc attaaagtaa acaaagtatt tagtaagtcc
     7081 atcattaacg atgatttaaa agacgcaact tttgataatt acgaacctac aaataaagac
     7141 ttagacaaag ctaaacagtt gtgcatgaga tacgctaata actttgatat tgataacaaa
     7201 caatccctca tgctatatgg ctcatttggt actggtaaat cacacttatc aatgtcaatt
     7261 gtaaaagttg taaaggccaa aggttatagc gtactttaca tgaatgtacc acaactgata
     7321 acaacgtata aaagcacatt taataattca gaaatgacag aacgcgatct ggataaaatt
     7381 atcgcaaagg ttgatttatt ggtactcgat gattatggta cgacattgag caattttggt
     7441 gtcagtaaaa tgtttgaggt tatggaaagc cgaacaggta aacacaatat cattactaca
     7501 aacaatccgg ccaaggaatt gacaacaaac aaagactact caaaattgtt tagtcgaatc
     7561 atgaaaaata cgacgatagt caaaatgaat ggagaagatt atagactgcg aggtgttaga
     7621 ttttgataac taaggaaaac atcagacaaa ttcttgaatg cagcgaaata tacgctcaga
     7681 cgttgattaa ttgggcacag ggcgacgaaa agaaattggt agacctaatt aatacaaaat
     7741 taaaagaacg cagtgtacgg cctgctatga cgattttaga ggtggtctaa tgagtccaga
     7801 agtacctttg tataattctg aaggtaataa gattggctcc tacgttaaat taggcaattt
     7861 aaaagttaga gtctatggac tgtatacggc ttacggattt gaccagttta ttttaacgac
     7921 aaatgaattc gaaaaaatca aaacgagatt tggtttaagt attaaaaccc aaacagacat
     7981 tttcgaattt ttataaggag cagagatgaa aaagatgggc atacaaattt ttatggttaa
     8041 tgatgtttta attcataaaa tcagaacatt caaaaaatga ggagaaaaag ctatgacatt
     8101 aattctcatc ctagagatta aacaagaaga atagagggat tgtatatgta tgttaaacat
     8161 tatgaatatg ttgtgtatag aggcgaagaa atcatttgtg caggcacaaa agatgaggtc
     8221 attacaaaac taaatacaac aaaaaataca ttagatagaa tagcaagctc aacaacagaa
     8281 aaagaagaag cagagctata taaaaagaat ccacatcatc aaagattaat tgcagtaaaa
     8341 attgaaacat cagaaattga aaaggaatta ggtttgcaga aagtgaagtg ggcataaagt
     8401 tgatagacaa ggctcaagta aaagcgtaca tgaaacaatt tttcggaagc aagcgctatt
     8461 tgtatcaaaa tggccgaaaa gtagcacata tccatatagt gaatggtatt tatcattttc
     8521 acggacattt taaaactaaa ttttctagat taaaattaga gttcaaatgc aaacaagact
     8581 tcaatgacta tcttgagaaa catgaattac gttttaagga gtgatagcga tggagttaag
     8641 caattcagat agacaacgct atcgaattaa aacaagtggt aagtcaccaa cagaaataaa
     8701 caaagtactg cgtaaacgtg gtgtgcgtgg gtttgtagtg aacgttgatc ccgaagaagt
     8761 aacgatgtta gtagaaaaga aggacaaaag gcacaataag gagtgtatga gatatatgaa
     8821 tctgagtttt taatgagtcc atttttacta gaacatggtc cattgtataa cggcgaacaa
     8881 tattttttca gtacaagtta caactatttg ctaagtatag taaggcattg tgattcttat
     8941 ggagttcagg acggtctata cgaaatggca aaggtttcac ttgatagaga tgaaataatt
     9001 ggtgatgtat taggatggct aactgtcgag gatgtattaa aacatgtaga aaatgccaac
     9061 cttaaaaagt tgaggtgaaa taaacatgaa taacttaata gacatagttc aaacaatgga
     9121 gcataaaatc gaacaaatta aagcagaacg cgattcactt ataaacgacc tgactaactt
     9181 gcgtaaacag cgtgataatt acaaaagcag agctgaaacg ttagacaact taaaagagta
     9241 cttgtctgaa gcacgtactc ttaacatcaa atgcttagaa aaaatgtctg aaggctattt
     9301 taaaggaaaa gtagcaggac gtattcaaat gattgatgaa ttaattacgg taattagaat
     9361 attggagggc gagtgaatgg ctaaaaaaca taaagtagca gtttatgaat tgaaagatag
     9421 ccaaggtgaa tacattgcta aagatatgga catcggaatc accacaaatt tatcagacgc
     9481 atatgctgta tggaatatag atggctcaga gcctaacctt aaaaatatta aagaattagc
     9541 gaaagctaaa gaatcggatt gggataattt ctataaagtt aattacggtc ctaatgcaat
     9601 aaataattat aaatcataca catggttgca gcattgcaat ttgataatcg ttgaaataga
     9661 tgaggaaact tttaatagta tcaaggggga aaattaaaat ggaacaatta attaataaca
     9721 tcgaacaatg gagtacagaa agaggattac atgaaggtag tcctattagg cagtttgaca
     9781 aattggttga agagtttggt gaacttgtca aagggc
//
LOCUS       DANHPA010000091         9511 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.091, whole genome shotgun sequence.
ACCESSION   DANHPA010000091 DANHPA010000000
VERSION     DANHPA010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 9511)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9511)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9511
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.091"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            11..604
                     /locus_tag="PTC28_001884"
     CDS             11..604
                     /locus_tag="PTC28_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylmercury lyase"
                     /protein_id="HDK5717158.1"
                     /translation="MNFTQGLTEAENDLRLEMIHYICDNPETPLKVKPEYQTLINKNV
                     VVAENGELISIYPISLKATNKKVYTNQNTSPVFAMCAIDAIGVHYTIHSNITIESEDE
                     LMHTPIHFEMKDGHIINRNEHDIFVLYKDVLKKENCNVDCCPYIHFFTSEQNALEYLK
                     QVQYTGPYQILNLDEANETAKALFRYQPVECGRCCQS"
     gene            complement(716..3121)
                     /locus_tag="PTC28_001885"
     CDS             complement(716..3121)
                     /locus_tag="PTC28_001885"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HDK5717159.1"
                     /translation="MLISKEWLETYVDLDVSIEALAERITRTGIEVDDIQDFTKEIKN
                     LVVGYVEEIAQHPDADKLNICQVNIGEETPVQIVCGAPNVGAGQTVIVAKVGGRLPGG
                     IKIKRAKLRGQVSEGMICSLQEIGLPSNVVPKKFEDGIYQFATAIEPGTDALKALYLD
                     DQMMEFDLTPNRSDALSMIGTAYEAAALYDKQVRKPETTVTAQPKAAHETLTVKVEDT
                     TQVPYYSARVVENVQIAPSPEWMQARLMKAGIRPINNVVDISNYVMLEYGQPLHMFDK
                     DHIGSNDIVVRLAHENEKMTTLDDQERELLSSDIVITNGQQPIALGGVMGGDFSEVTP
                     ETKNVIVEGAIFNPVAIRHTSRRLNLRSESSSRFEKGIATEFLDEAVDRACFLLETLA
                     QGQVLDGRVTDGDLGALVTDITITADKVNRTVGFDLTEADIVRVFEQLGFNTEITNND
                     IHVKVPSRRRDITIEADLIEEIARIYGYDNIPSTLPVFEDVTSGALTDRQRKTRVVKR
                     TLEGAGLSQAITYSLVDRERATAFTTTTHQTVELLMPMSEAHSTLRQSLIPHLIDATQ
                     YNVARKNQDIALYEIGNVFFGQEGQTLPEQVEYLSGIMTGEYVSNPWQGKKEVVDFYL
                     VKGIVERIADQLALRFEYETTQIDGLHPGRTAAVTLNGEAIGFIGELHPTVAKTYDLG
                     RTYVFELNYEKIMQQSVGYINYQPIPKFPGVTRDIALVVASEVRAASLVHTIHQNGGA
                     ILKDARVFDVYEGEHMEAGKKSVAIRLTYLDENNTLTEEQVTKVHEAILAVLEAQGAT
                     LRG"
     gene            complement(3108..4178)
                     /gene="pheS"
                     /locus_tag="PTC28_001886"
     CDS             complement(3108..4178)
                     /gene="pheS"
                     /locus_tag="PTC28_001886"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HDK5717160.1"
                     /translation="MVQNEAMIQIKNEAMTDIEQAQDEKALQDVKVKYLGKKGQVTGL
                     MKQMKDLPKEDRPAYGQRVNEVRQAIEGAVAERQTLLAEAQLNQQLAEESIDVTLPGR
                     TVATGAQHPLTRTVEEIEDLFLGLGYEIVTGFEVEQDYYNFEALNLPKSHPARDMQDS
                     FYITEEVLLRTHTSPVQARTMEQRNGQGPVKIICPGKVYRRDSDDATHSHQFTQIEGL
                     VVDENIKMSDLKGTLELLAKSLFGADREIRLRPSYFPFTEPSVEVDVSCFKCKGKGCN
                     VCKHTGWIEILGAGMVHPNVLEMAGFDSKKYSGFAFGMGPDRIAMLKYGIEDIRHFYT
                     NDIRFLNQFKAVEDRGEQHVNI"
     gene            complement(4587..5333)
                     /locus_tag="PTC28_001887"
     CDS             complement(4587..5333)
                     /locus_tag="PTC28_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HDK5717161.1"
                     /translation="MEAITSIQNPKIKNYNKLKKKKERDKQGLAILEGFHLIEEAVES
                     QIKVTQLFMIEPSRVPTELIEAAEEVYEITQKVAETLSGTVTPQGIFAIIEKPQVDVT
                     AAKQVLILDRIQDPGNLGTMIRTADAAGLDLIVMTKGTADVYQDKVLRASQGSVFHIP
                     IQYVDDMSAWMSSFKGPIYGTALQDATTYHQVASQQDTFALILGNEGEGVAMDLLAHT
                     TQNLIIPIYGQAESLNVAVAAGVLMFYLKG"
     gene            complement(5447..5620)
                     /gene="rpmF"
                     /locus_tag="PTC28_001888"
     CDS             complement(5447..5620)
                     /gene="rpmF"
                     /locus_tag="PTC28_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019469283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HDK5717162.1"
                     /translation="MAVPKRRTSKTRKNKRRTHFKLAVPGMQECPNCGELKLSHRVCP
                     NCGSYKGEEVVSK"
     gene            complement(5677..6216)
                     /locus_tag="PTC28_001889"
     CDS             complement(5677..6216)
                     /locus_tag="PTC28_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HDK5717163.1"
                     /translation="MKWSITQLRKYQGQPFKFNQTVTFNHLIQNLDLLDLSPIDIEGE
                     LIVKSNEVVATMHLTGQYKMACARTLVPVDVPLDATTTEVFDLDGLYEDEDDEHYHLV
                     TNGMIDLREIAEEIVMLEKPMRVVADDSDQMLTGGQGWEVIDKDNLDNDPSQDESHVN
                     VDPRLQKLQQLYDDSNHAR"
     gene            6343..7479
                     /locus_tag="PTC28_001890"
     CDS             6343..7479
                     /locus_tag="PTC28_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HDK5717164.1"
                     /translation="MKSVAMITEYHPFHHGHLYHAQQSKKLSQSDVAIAIMSGQFMMR
                     GLPAMYNKFKRAQMATVGVDLVVEMPLVGSLSSSDIFAQTGVKVADYLQTDVLSFGSE
                     SGDLSQLEHAAQQLIQLEQTSAFQTAIKSGKSYARIAAETLQSDLLSTPNNILAIAYL
                     KQLHLQRSSMQPMTVTRAHAQHHDSEMHHTSIASGTAIREGIMSGDRTWQKMVPEQNI
                     PLMTIPFHDQQRLFDLIKFAILQHTPETLKQIYTMSEGFENRLYRAALSATDYTTFMH
                     ALKTKRYTYTHIQRILMNVLLHFQYADVTEDVHAVRVLAMTPQGQRYLKYLKVHFPER
                     RIVTSIHRETAKLFPNEVKATNIYNVLTGDTMTDFNTPVYIRKH"
     gene            complement(7813..8304)
                     /gene="coaD"
                     /locus_tag="PTC28_001891"
     CDS             complement(7813..8304)
                     /gene="coaD"
                     /locus_tag="PTC28_001891"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HDK5717165.1"
                     /translation="MVNTKAVIPGSFDPITKGHIDIVERSADRFDELHVCVLRNSSKK
                     GTFTVEERLELIEKSVAHLPNVYVHSFSGLLVDFCDEIGATTIIRGLRAVSDFEYELR
                     ITSMNKKLNDKVETLYMMSSTNYSFISSSMVKEVAQYDADISEFVPKHVEEALLKKFK
                     LDQ"
     gene            complement(8297..8848)
                     /gene="rsmD"
                     /locus_tag="PTC28_001892"
     CDS             complement(8297..8848)
                     /gene="rsmD"
                     /locus_tag="PTC28_001892"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HDK5717166.1"
                     /translation="MRVIAGKHKSKSLETLEGRNTRPTMDKVKEGIFNSLHTVEGLGL
                     DLFAGSGSLGIEALSRGMDKVIFVDQNIRAVKVIQHNLKKLDLTHQAEVYKNNADRAL
                     KALNKREIQFDLIFLDPPYEKGLIDEALKSIHQFDLLKQNGIIMCEYSHRESIDTSLF
                     EEVKRYHYGLTDTCVLKKGESHG"
     gene            8911..9300
                     /locus_tag="PTC28_001893"
     CDS             8911..9300
                     /locus_tag="PTC28_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002457429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717167.1"
                     /translation="MQQSFIVLGHGLTDLYEFKTLIEYNHERIDRIVFFHTPKSTHQL
                     TSVAIIMQPTEGRKFQAMYIMLDALRYPYPESNRKYELIQSYAAPYHIEMVGVDVHAP
                     DDYPELDLYFNYLKSVLRLQHWIPALE"
     gene            complement(9303..>9511)
                     /locus_tag="PTC28_001894"
     CDS             complement(9303..>9511)
                     /locus_tag="PTC28_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020444660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YlbG family protein"
                     /protein_id="HDK5717168.1"
                     /translation="KNMKHERHIRKYGHIVYTNSQQKYVSMYVNQKDIDDVVTRLMKL
                     KYVIRVVGSPYKDLKQEYPKEANE"
BASE COUNT         2758 a         2065 c         1608 g         3080 t
ORIGIN      
        1 agggattgac ttgaatttta cccagggttt aactgaagca gagaatgact taagacttga
       61 gatgattcac tatatttgcg acaacccaga aacacctctt aaagtaaagc ctgaatatca
      121 aacactcatc aacaaaaatg ttgtggttgc cgaaaatggt gaattgattt ctatttatcc
      181 gatttcactt aaagcaacga ataaaaaagt atacacaaat caaaatacgt cgccagtatt
      241 tgcaatgtgt gcgattgatg cgataggtgt gcattatacg attcattcga atatcacgat
      301 tgagagtgaa gacgagttga tgcacacacc catccacttt gaaatgaaag acggacatat
      361 catcaatcga aatgaacacg acatttttgt tttatacaaa gatgtgctaa aaaaagaaaa
      421 ttgcaatgtt gactgttgtc cttatattca cttttttaca agcgagcaaa atgccctaga
      481 atatcttaaa caagttcaat atacgggacc ttatcaaata ttaaatttag atgaagcgaa
      541 tgaaacagca aaggcattat ttcgatatca gccagtggaa tgtggtcgct gttgtcaatc
      601 atgacatgta cagttaaggt tatcatttga aatacatcaa ttttcgatat aacgagacaa
      661 ctcaaaaaac accaagtaac ttcaatcgtt acttggtgtt ccctgttatc gttttttatc
      721 cacgtaatgt tgcaccttgt gcttctaaca ctgcaagaat cgcttcatga acttttgtca
      781 cttgttcttc tgttaatgta ttattttcat ctaagtaagt taaacgaatg gctactgatt
      841 ttttgcctgc ttccatatgt tcaccttcat aaacatcaaa tacacgggca tcttttaaaa
      901 ttgcaccacc attttgatga atcgtatgaa caaggcttgc ggcacgtact tctgacgcta
      961 caacaagtgc aatgtcacgt gtcacgcccg gaaatttcgg aatcggttga tagttaatat
     1021 aaccgactga ctgttgcatg attttttcgt aattgagttc aaaaacatac gtacggccta
     1081 aatcatatgt tttcgctaca gttggatgta attccccgat aaaaccaatc gcttcaccat
     1141 ttaacgtcac tgctgcagta cgacctgggt gaagaccatc gatttgggtt gtttcatatt
     1201 caaaacgtaa tgcgagttgg tcagcaatac gttcgacaat acctttcaca agataaaaat
     1261 caaccacttc ttttttacct tgccatggat tagatacata ttcacctgtc ataatcccac
     1321 ttaaatattc cacttgttct ggtaatgttt ggccttcttg accgaaaaag acatttccta
     1381 tttcataaag tgcaatatct tgatttttac gcgcaacgtt atattgcgtt gcgtcaatta
     1441 aatgtggaat taagctttga cgtaatgttg aatgggcctc actcatcggc atcaacagtt
     1501 caaccgtttg atgcgttgtt gttgtaaatg cggttgcacg ttcacgatcc actaatgaat
     1561 acgtaatcgc ttgtgataga cccgcacctt ctaatgtacg tttcacgaca cgtgttttac
     1621 gttgacggtc agtcagtgca ccacttgtta catcttcaaa tactggtaac gtcgatggaa
     1681 tgttatcgta accgtaaata cgtgcgattt cttcaattag atccgcttca atcgtaatat
     1741 cgcgacgacg cgatgggact tttacatgaa tgtcgttatt cgtaatttca gtgttaaagc
     1801 caagttgttc aaatacacgc acgatatccg cttctgtcaa atcaaagccg actgtacgat
     1861 ttactttatc tgctgtaatc gtaatatctg tgactaatgc acctaaatca ccgtctgtca
     1921 cacggccgtc taacacttga ccttgtgcca atgtttcaag taagaaacat gcacgatcaa
     1981 cagcttcatc taaaaattca gtcgcaatgc ctttttcgaa acgacttgat gattcgctac
     2041 gtaagtttaa acgacgtgat gtatgacgaa tcgcaactgg gttgaaaatc gccccttcaa
     2101 cgataacatt tttagtttct ggtgttactt cagagaaatc gccacccatc acaccaccaa
     2161 gtgcaatcgg ttgttgacca ttagtaatga cgatatcgct tgataataat tcgcgttctt
     2221 gatcatctaa agttgtcatt ttttcatttt catgagcgag tcgaacgaca atatcgtttg
     2281 acccaatgtg atctttgtca aacatgtgca atggttgacc gtattctaac atgacatagt
     2341 ttgaaatatc gacaacgtta ttaattggac gaatgcctgc cttcattaaa cgcgcttgca
     2401 tccattcggg tgacggtgcg atttggacat tttcaacgac gcgtgcactg tagtatggaa
     2461 cttgtgtcgt atcttcaact ttgaccgtca atgtttcatg cgctgctttc ggctgtgctg
     2521 tcactgttgt ttctggtttg cgaacttgct tatcgtacaa ggcagctgcc tcgtaagctg
     2581 ttccaatcat acttaatgca tcagaacggt tcggtgttaa atcaaattcc atcatttgat
     2641 catctaaata taacgctttt aatgcatctg tgcctggttc aatagcagtc gcaaattgat
     2701 aaatgccatc ttcaaacttt ttcggtacaa cattgcttgg cagaccgatt tcttgaagcg
     2761 aacaaatcat accttcagat acttggccac gtaatttagc acgtttaatt ttaataccgc
     2821 ctggtaaacg accgcctact tttgcgacga tgactgtttg acctgcacct acgttcggcg
     2881 caccacaaac aatttgtaca ggggtctctt caccgatatt cacttggcaa atgttaagtt
     2941 tatctgcatc tggatgttgt gcaatttctt caacataacc gaccactaaa tttttaatct
     3001 ctttcgtaaa gtcttgaata tcatcaactt caattcctgt acgcgtaata cgttccgcca
     3061 acgcctcaat tgaaacatct aaatcaacat atgtttctaa ccattcttta gatattaaca
     3121 tgttgttcac ctctatcttc tactgcttta aattgattta agaaacggat atcgttcgta
     3181 tagaaatgac ggatatcttc aataccatac ttcaacatcg cgatacgatc aggccccatt
     3241 ccaaacgcaa aacctgaata ttttttcgaa tcaaagcctg ccatttcaag tacgttcgga
     3301 tgtaccatac ctgctcctaa aatttcaatc cagccagtat gtttacacac gttacagcct
     3361 ttacccttac atttaaaaca tgacacgtca acttccacag acggttcagt aaatgggaaa
     3421 taacttggac gtaaacgaat ttcacgatct gcaccaaaca gtgatttcgc taataattcg
     3481 agtgttcctt ttaaatcact cattttaatg ttttcgtcga ccacgagccc ttcgatttgt
     3541 gtaaattgat gactatgtgt cgcgtcgtca gagtcacgtc gatatacttt acccgggcaa
     3601 atgattttca ctgggccttg accattacgt tgctccattg tacgcgcttg tacgggtgac
     3661 gtatgagtac gtaacaatac ttcttcagta atgtaaaaac tgtcctgcat atcgcgcgct
     3721 ggatgtgatt tcggtaagtt gagtgcttcg aagttgtagt aatcttgttc cacttcaaat
     3781 cctgtcacaa tttcataacc taaacctaaa aataagtctt caatttcttc aactgtacgt
     3841 gttaaaggat gttgtgctcc cgttgcgact gtacgccctg gtaatgtcac atcgatcgac
     3901 tcttctgcta attgttgatt taattgtgct tcagcaagta gcgtttgacg ttcagcaacc
     3961 gccccttcaa tcgcttgacg cacttcattg actctttggc catatgcagg tctgtcttct
     4021 ttcggcaagt ctttcatttg tttcatcaga cctgtcactt gacctttttt acctaaatat
     4081 ttgaccttaa catcttgtaa cgctttttca tcttgtgctt gttcaatatc agtcattgct
     4141 tcatttttga tttgaatcat tgcttcattc tgcaccattg tcattcctcc tttaattctt
     4201 taacgccatt catactgaaa cctctttatc gcacttcatt tttgtcaatt gtcggatatg
     4261 tcttttgccc tcaatcacag cgcacacaaa taaaaaagac tccgcccgca ctattgggac
     4321 gaaatctctt ccgtggtacc acccagtttt atgtatccaa gacacataca ctctgaattc
     4381 atattgataa cggattttac ttccgactta aatctcttta agtagctaaa aaggtgaaaa
     4441 aaactatgta gattgagtcc aactcacagt ttatgccaga cctccctgaa caatcccgat
     4501 aatagtttac gtctttttat cagcagtttg ttgaattgtt aatacgtcta ttatatacat
     4561 gcgttcatca agggtcaacc caaagtctaa ccctttaaat aaaacattaa aacccctgca
     4621 gcgacggcaa catttaaact ctcagcttgt ccataaattg gaataatcaa gttttgtgtc
     4681 gtatgcgcta ataaatccat cgcgacacct tccccttcat tgccgaggat gagtgcaaat
     4741 gtatcttgtt ggctagcgac ttgatgatac gtcgttgcat cttggagcgc agtcccatat
     4801 attggtcctt taaacgatga catccaagct gacatgtcat ctacatattg aattggaatg
     4861 tgaaagacgc taccttgact agcacgtaat actttatctt ggtagacatc agcagttcct
     4921 ttcgtcatca ctattaagtc taaccctgct gcatcagccg tacgaatcat cgtgccgagg
     4981 ttacctgggt cttgaatacg atctaaaatt aacacttgtt ttgctgcagt gacatcaact
     5041 tgcggctttt caatgattgc aaatatccct tgaggtgtga cagttcctga taatgtttca
     5101 gcgacttttt gcgtaatttc gtatacttcc tctgccgctt cgatgagttc tgtcggcaca
     5161 cggctcggct caatcataaa caattgcgtc accttaattt gactttcgac cgcttcttca
     5221 attaaatgaa atccttctag aattgcaagc ccttgcttat cgcgttcttt tttctttttt
     5281 aatttattat aatttttaat tttaggattt tgtatcgatg taatagcttc cattttgggt
     5341 tcatctcatt tcatcttatg ttcatgtact gctcaaaaaa taggactgga acagtgattg
     5401 ttccagtcct attttacatt aatatccagt tactgtaaaa agtctattat ttagaaacga
     5461 cttcttcacc tttgtatgaa ccacagtttg gacatacacg gtgagataat tttaattcac
     5521 cacagtttgg gcattcttgc atgcctggta ctgctaattt aaaatgtgta cggcgtttgt
     5581 tttttcttgt tttagaagtt cttctttttg gtactgccat ggttagttca tcctcccttt
     5641 tattcgattc atttgacgca tcgtagttca aaaaacttag cgtgcatgat tactatcatc
     5701 gtataattgt tgtaatttct gaagccttgg atcgacattc acatgtgatt catcttgaga
     5761 tgggtcgtta tccaaattat ctttgtcaat aacttcccaa ccttgaccac cagtaagcat
     5821 ttgatcgctg tcatccgcaa cgacacgcat tggtttctca agcataacaa tctcttcggc
     5881 aatttcacga agatcaatca taccattagt gacaagatga taatgttcat cgtcctcatc
     5941 ctcatacaaa ccatctaaat caaacacttc cgttgttgtt gcatccaacg gcacatctac
     6001 aggcactaac gtacgcgcgc acgccatctt atactgccca gttaaatgca ttgtcgcaac
     6061 aacctcattc gatttaacaa tcaactcacc ctcgatatca atcggtgaca agtctaatag
     6121 atccaagttt tgaatcagat ggttaaacgt tacggtctga ttaaatttaa aaggttgtcc
     6181 ttggtatttt ctcaattgtg ttattgacca cttcatatgg cttcacctct aacaagcaca
     6241 aaatttattt taactattga tagttaagtt gtcaagattt tttcttaaca tcttaagttc
     6301 tgatacaata ttcataatga gacacgaaag gacagaatgc aaatgaaaag tgtcgcaatg
     6361 attacagagt atcacccttt tcatcacggc catctctatc atgcgcaaca aagtaaaaaa
     6421 ctttctcaaa gtgacgttgc aattgccatc atgagtggcc aatttatgat gcgtgggttg
     6481 cccgcgatgt acaacaaatt taaacgtgca caaatggcta cagtaggtgt tgatttagta
     6541 gtcgaaatgc cattagtcgg ctcactatca tcgagtgaca ttttcgctca aaccggtgtt
     6601 aaagtagcag actatttaca aactgatgtg ttaagtttcg gaagtgaaag cggtgaccta
     6661 tcacaattag aacacgccgc gcaacaactc attcaactcg agcaaacatc cgcttttcaa
     6721 acagcaatca aatcagggaa aagttatgcc agaatcgcag cggaaacatt gcaaagcgac
     6781 ctattaagta caccgaataa cattttggct atcgcctact tgaagcaatt gcacttacaa
     6841 cgcagtagca tgcaaccgat gaccgtaacg cgtgcacacg cccaacacca cgattccgaa
     6901 atgcatcaca cctccatcgc gagtggtaca gcgattcgcg aaggcatcat gagtggcgat
     6961 cggacatggc aaaaaatggt acctgaacaa aacatacctt taatgaccat cccatttcac
     7021 gatcaacagc gtttattcga tttgattaaa tttgcgattt tgcaacatac acctgaaaca
     7081 ttaaagcaaa tttatacgat gagtgaaggt tttgaaaatc gtttataccg tgcagcgttg
     7141 tcagcaacag attacacaac ttttatgcac gcattaaaaa cgaagcgtta tacttatacc
     7201 catattcaac gtattttaat gaatgtgttg ttgcattttc aatatgctga tgttaccgaa
     7261 gacgtccatg ccgtgagagt attggcgatg acgcctcaag ggcaacgcta cttgaaatat
     7321 ttaaaagtac attttccaga acgccgcatc gtcacatcga ttcatcgtga gacggcaaag
     7381 ctatttccaa acgaagtgaa agcaacaaat atttataacg ttttgacggg cgatactatg
     7441 accgacttta atacacctgt gtatattcgc aagcattaaa tcattaaaat atcatgctgc
     7501 cttaaatatg ttttattttc ggcatcaact tcaactattt taattcggac tgtcaacgca
     7561 ttgtattcta aaatcttaag aaaagggcta gaggcaaaaa atatttttta cctagccctt
     7621 cctaatatat atcaatcgta ttagcataat caaaatccaa acttattttg gcacaataca
     7681 tttgatagtg atgacaattt gaccttttac cgaataagat cttaatgatg tctcaccatc
     7741 tttttaatgc ttaattaacc gtatacttct attgttttct caaaagcaat atctgggtca
     7801 ttcgtttcca ttttactgat caagcttaaa ctttttcaac aacgcctctt ctacatgttt
     7861 cggcacaaat tcagaaatat ccgcatcata ctgtgcgact tccttcacca tactcgaact
     7921 aatgaaggaa tagtttgtcg aactcatcat atataaggtt tctactttgt cattcaactt
     7981 tttattcatt gaagtaattc tcaactcata ttcaaagtca ctgaccgcac gcaatccacg
     8041 aatgatcgtt gttgcaccaa tttcgtcaca aaaatctact aataagccac tgaaggaatg
     8101 cacatacaca ttcggtaaat gcgcgacgga cttttcaatt aactccaagc gttcctccac
     8161 tgtaaacgtc ccttttttac tactgtttcg taatacacag acgtgcaatt catcaaaacg
     8221 gtcggcactt ctttcaacga tatcgatatg tccttttgta atagggtcaa aacttccagg
     8281 aataacagct ttcgtattaa ccatgacttt ctcctttttt caaaacacaa gtgtcagtta
     8341 aaccatagtg atagcgtttg acttcttcaa aaagtgaagt atcaatggat tcacgatggc
     8401 tatactcaca catgatgata ccattttgct ttaataaatc aaattgatga atacttttca
     8461 gcgcttcatc aattaatcct ttttcgtatg gtggatcaag aaaaattaaa tcgaactgaa
     8521 tttctcgttt attcaacgct tttaacgcac ggtctgcatt atttttatat acttcagctt
     8581 gatgtgttaa gtctaacttt tttaaattgt gttgaattac tttaacagca cggatgtttt
     8641 gatcgacgaa aatgactttg tccatccctc gagaaagtgc ttcaatgcct aaactgccac
     8701 ttccagcaaa caaatcaagc cccagccctt caactgtatg taaactatta aaaatacctt
     8761 ccttcacttt gtccatcgtc ggtctcgtat tgcgcccttc caatgtttcg agtgatttac
     8821 ttttatgttt tcctgcgatg acacgcatgt ttttacactt ccaatccgat ttcattttta
     8881 atatactttg ttttaagagg aggaacccaa atgcaacaat cttttatcgt tttaggacac
     8941 ggattgacgg atctgtacga atttaaaacg ctcattgaat ataatcatga acgtatcgat
     9001 cgcatcgtct ttttccatac accaaagtcc acacatcaat tgacatctgt ggcgatcatt
     9061 atgcagccta ctgaagggcg taagtttcaa gccatgtata tcatgttaga tgccttgcgt
     9121 tatccttatc ccgaaagcaa tcgtaaatat gagctcattc aatcatatgc agcaccctac
     9181 catatcgaaa tggtcggtgt agatgtccat gcacccgatg actatcctga gcttgattta
     9241 tactttaact atttaaaaag tgtattacgc ttgcaacatt ggattcccgc actggaataa
     9301 ggttattcat ttgcttcttt tggatattct tgtttcaaat ctttataagg tgagccgacc
     9361 acgcgaatga catatttcag tttcatcagg cgcgtcacca catcgtcaat atccttttga
     9421 ttcacataca tcgatacgta tttttgttgt gaattcgtat agacaatgtg accatatttt
     9481 cgaatatgac gttcatgctt catgttttta a
//
LOCUS       DANHPA010000092         9340 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.092, whole genome shotgun sequence.
ACCESSION   DANHPA010000092 DANHPA010000000
VERSION     DANHPA010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 9340)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9340)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9340
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.092"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..569
                     /locus_tag="PTC28_001895"
     CDS             <1..569
                     /locus_tag="PTC28_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717169.1"
                     /translation="YMINVLFPNDKQKYETYLKAIKSTNQFMSHKVLLVLYHAVEERQ
                     LLNITTEEGFMIRLLPIKVIHFKEDWYLVYRGMDLQEQYLQIKRIHQVEIDDQAPQTL
                     SNKMEVTLEMDVTVWSHIKDLYKVNKIISKKDNLYTVIFNIAFIEAFELCLLHSPHIR
                     IIGPPRLYKKFVTHINQLCQVYLFQEIQ"
     gene            653..1879
                     /gene="pgaC"
                     /locus_tag="PTC28_001896"
     CDS             653..1879
                     /gene="pgaC"
                     /locus_tag="PTC28_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly-beta-1,6 N-acetyl-D-glucosamine synthase"
                     /protein_id="HDK5717170.1"
                     /translation="MDILLILLLYPLFMSIYWIVGTLFYALFYEIRLKKAPNKNIGED
                     GISFLIPCFNEADTIADTIKSIGALEFPNKEIIVINDGSSDNSAEILYRLQNTLDFIF
                     VDLPENNGKANALNQGLKYATYDYVMGIDADTMIDNDGPYFMLEHFKKNPKLAAVTGN
                     PRIRNKRALLGKIQAIEYASMVGSIKRAQSIMGKINTISGVFTLFRKSAIEAVGRWDI
                     DMITEDIAISWKFHLHGYHIKYEPRALCWMLVPETVSGLWKQRIRWAQGGQEVLIRDG
                     LKGLKSMNPALYMLVFEQFFSLIWVYWIVISLLLAFLNSNFLDIYYLQYHFSIIILSA
                     LILTFINIVQFTVSLIIDSRYEKQNMFTLFYLSWYPTIYWVLNALVAMLAFPKALLRK
                     KGEFATWSSPDRGKKD"
     gene            1846..2172
                     /gene="icaD"
                     /locus_tag="PTC28_001897"
     CDS             1846..2172
                     /gene="icaD"
                     /locus_tag="PTC28_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular adhesion protein D"
                     /protein_id="HDK5717171.1"
                     /translation="MVKSRQRKKRLKHSILNLIREVIIFCFSISLWLYCLIAFILIIG
                     SLLRISAHSVLLIRTVLNIEPDSMNQIFVKMAIFIVIITMIFTTSICVHLYRNKKEGI
                     NDGKFL"
     gene            2156..3022
                     /gene="icaB"
                     /locus_tag="PTC28_001898"
     CDS             2156..3022
                     /gene="icaB"
                     /locus_tag="PTC28_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intercellular adhesin biosynthesis
                     polysaccharide N-deacetylase"
                     /protein_id="HDK5717172.1"
                     /translation="MVNFFKLFIAIGCVVYTMAMALFPTNQAEAETHKLKDDGDKTAL
                     ALNYHRIRNDDFLDLFLFIFSNSKEISTYSVSKAEFERQIKWLKAHDAHFLTHEELIR
                     YKREGHFPKRSVWINFDDMDESIYKNAFPILKKYQVPATGFVITGEVGAQNFHNLNLS
                     TIDELEEMERSGLWTFQSHTHDLHSLEKTKSKMLTVSSKVLKYDLQTSNDYLDQHFNR
                     KETAIAYPYGQVSDEAVEIIKDSGISYGYTLEEKAMSVDDKNYYIPRILVSQDAFNEL
                     VKKWGAFNHDAS"
     gene            3009..4067
                     /gene="icaC"
                     /locus_tag="PTC28_001899"
     CDS             3009..4067
                     /gene="icaC"
                     /locus_tag="PTC28_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide intercellular adhesin
                     biosynthesis/export protein IcaC"
                     /protein_id="HDK5717173.1"
                     /translation="MTRRKTKLELVYFRAFTCMLIILTHIFTEFMRHLDTSNLAELKL
                     IYYLQHIVIFGTPSFIILSQLLTTLNYETINVNYIWSRVKYILLPYFIVGAFYCFSES
                     RITATSFTHQLFENLLLGRWHGYFIIVIMQFVLLSYVIFKVSPKIFDSKILLALSFII
                     QFSFLHQFDTNPAFAEKFMSIYPLSENTCMLGWIFFFFFGAYIGRRYNAVINFLRQYV
                     FIIITLAILSFGVFVIFQQHDYGWVTSFNENLMLYHTLMFLLLLSLCLHFKQMMLGTI
                     NLISAFSFFIYLFHPIILSTLYEYFLNFADLTFVFIAISLLYTLGICIGIGLFLREFR
                     IFRFAIGKQPYNLNIQLS"
     gene            complement(4064..5098)
                     /locus_tag="PTC28_001900"
     CDS             complement(4064..5098)
                     /locus_tag="PTC28_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 20 glycosylhydrolase"
                     /protein_id="HDK5717174.1"
                     /translation="MKWGFSIGLSLMLIFTTFQSEAVAPKFQKGVNIDIARKDYSLET
                     IKEIVDTIAKYDGDYLQLHFADDQHHAVDLPGMSPTKRDTLSYEEIKTLIKYSNKRDV
                     MVVPDIDFPSHAGALLQQLKKQDKARYKTVVSDFSTNTVDYFDNQEAVKWSSEYLKDV
                     MSLFEQPKFKGEQRIVIGGDEVPGAMDHQKAFVHFMNKLAETAKNKGYQPQIWNDSLT
                     KQGVQQLDAHVSVLYWNQHEATHRQQAHVEDLAKANISVFNYNASTLYFLPSSQHSKQ
                     TIQQQQQFIERYYADNRFNYFNDAHHVVAQPNIQGSALSFWGEHAETLSQQEILQQLQ
                     PLIKTYLTQN"
     gene            complement(5366..6058)
                     /locus_tag="PTC28_001901"
     CDS             complement(5366..6058)
                     /locus_tag="PTC28_001901"
                     /EC_number="6.2.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxyhexanoate--CoA ligase"
                     /protein_id="HDK5717175.1"
                     /translation="MYSVKMRANQGGVHISGAETICEAQKIPAVLQTFFDKGFQHENG
                     DVDFLNLKIEKVTEPLHTLEALPIIEDTTHTLEALCEMHGITKEALDKGMGYIFDDTQ
                     YRGAIIVSAETGERLDQTGEKGVRVTHFCFEDYARIPLVSSRIQDALTIATCITAFAQ
                     VKGELCVSDDLHYTTGYFASAHRGYYRLHHMKPTGTRFGGRVIFVDDALSIDSYTSFL
                     QQQPKQVIRHEQ"
     gene            complement(6061..7182)
                     /locus_tag="PTC28_001902"
     CDS             complement(6061..7182)
                     /locus_tag="PTC28_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase
                     family protein"
                     /protein_id="HDK5717176.1"
                     /translation="MDFQRKLDAIQAKGQLRQLREVEAVDGKWLTVQGRRFLNFTSND
                     YLGLGQMTHADGMSEKGQKHLASSRLVSGNSALYTKIERLLSTHFHFEDALVTTSGYD
                     ANLAVMQAFQDEAVVVFSDEANHASIIDGIRLSRLKKVIYPHNDVVALEKALLQYPET
                     LTKVIVTDSVFSTDGAFAKLDALVQLKAKIPNIWLVVDDAHAFGLRLHTHYSNIDILT
                     TSLSKGVGAHGGAILCSALFKQVLINVARPVIYSNALPQLQLAQLYENLKIMLAQPEK
                     AHVLHQLSDTFNQLYERDFGVPYEGHSRTPIKWISFDDDHEIECVYQALLAQGIWVSY
                     FIYPTVTRPILRVSLSLFHDAHDLEYLFEQLLLARCKGV"
     gene            complement(7185..8537)
                     /gene="bioA"
                     /locus_tag="PTC28_001903"
     CDS             complement(7185..8537)
                     /gene="bioA"
                     /locus_tag="PTC28_001903"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HDK5717177.1"
                     /translation="MKHETLVQKDRDYVWHPFTQMGMYNQQDPIIIEKGKGSYLYDTR
                     GRKYLDGYASLWVNVHGHQNRQLNRAIQRQLNQIAHSTLLGSSNVPSILLAEQLVTMT
                     PERLQKVFYSDTGSAAVEIAIKMAYQYWKNLDAERYAKKNKFLTLHQAYHGDTIGSVS
                     VGGIDTFHRIFKDLIFENIQVPCPSFYHSDYPSEAAMVDDILKQIEAILQARADEIVG
                     FVIEPLIQGATGLYVHPEGFLKAVEQLCRKYNILLIVDEVAVGFGRTGKMFACEHEDV
                     QPDLMCLGKAMTGGYVPLAATLTSQAVYDAFLSDAHAKQTFFHGHTYTGNQVVCAVAL
                     ENIRLFQTRHLIHHIEKTSTTLRKSLETLSAHPHVGNIRGRGLMYAVELVENCSDKTP
                     LDIAQVEAMIAKCKQEGLMIRNLENIITFVPVLSMSNREIKKMVRIFKKALHHVLKER
                     "
     gene            complement(8527..9204)
                     /gene="bioD"
                     /locus_tag="PTC28_001904"
     CDS             complement(8527..9204)
                     /gene="bioD"
                     /locus_tag="PTC28_001904"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HDK5717178.1"
                     /translation="MKLFITSTNTDVGKTYVTTHLYHYLTRKGLKVHIIKPFQTEVLP
                     DGKYPDLESYQKMCGLSYADTSFYMFAAPVSPHLAFKLEPHQQLDRMAIKAWVQTWHA
                     QCDVLLIEGAGGIRVPLYEDETTFYMTADFIRDVADGVISVLPSQLGAISDALVHHHY
                     LTTMQLPKGLYVMNRYTDTPIEQDNHKTIEKITGRHVEVFPEAGTDRDFSETLFDQIK
                     GVITYET"
BASE COUNT         2798 a         1841 c         1634 g         3067 t
ORIGIN      
        1 aatatatgat taatgtattg tttccgaatg ataagcaaaa atatgaaact tatcttaaag
       61 ccattaaaag tacgaaccag tttatgtcac ataaagtttt actcgtgtta tatcatgcgg
      121 ttgaggagcg acaattgctt aatattacaa cagaagaagg attcatgata cgcttacttc
      181 ctattaaggt cattcatttt aaagaagact ggtatctcgt atatcgggga atggatttac
      241 aagaacaata cttacaaatc aaacgaattc accaagtaga aatcgatgat caagcaccac
      301 aaaccttatc caataaaatg gaagtaacgc ttgaaatgga tgtaactgta tggtcacata
      361 ttaaagattt atataaagtg aataaaatta tttctaaaaa agacaatctt tatacagtca
      421 tctttaatat tgcatttatc gaagcattcg aattatgtct cctacacagt cctcatatta
      481 gaattattgg tccacctcgc ttatacaaaa aatttgttac tcatataaat caactttgcc
      541 aagtttattt atttcaagaa atacaatagt ttagtttgat tcatattatc tacctaaaca
      601 atatataaca acgctcctcc cttcactctt atgatttagg aggttaattg ttatggatat
      661 tttactgatt ctgctgttat atcctttatt tatgtctatt tattggatag tcggcacact
      721 gttttatgct cttttttatg aaataagact aaaaaaggcg ccgaataaaa atattgggga
      781 ggacggtatt tcatttttaa ttccatgttt taacgaagct gatacgatag ctgatacgat
      841 taaaagtatt ggagcgttag aatttccaaa taaagaaatc atcgtgatta atgatgggag
      901 ttctgacaac tcggcagaaa tactttatcg acttcaaaat acattagatt ttatttttgt
      961 tgatttgcca gaaaataatg gaaaagcaaa tgcattaaat caaggactaa aatatgcaac
     1021 atatgattat gtaatgggga ttgatgccga tacgatgatt gataatgacg gaccgtattt
     1081 tatgctggaa catttcaaaa agaatccaaa actcgctgca gttacaggta atccgcgtat
     1141 tcgcaataaa cgcgcattgt taggaaaaat acaggctatt gaatatgcca gtatggtcgg
     1201 aagtattaaa agggcccagt ctattatggg gaaaatcaac actatttctg gtgtgtttac
     1261 attatttcgt aaaagcgcaa ttgaggctgt agggcgttgg gatattgata tgattactga
     1321 agatatcgca atttcgtgga agttccattt acacggctac cacattaaat acgagccacg
     1381 tgctctttgt tggatgcttg tccccgaaac agtttcaggt ttatggaaac aacgaatacg
     1441 gtgggcacaa ggtgggcaag aggtgctcat tcgcgatggt ttaaaaggac tgaaatcgat
     1501 gaaccccgct ttatatatgc ttgtattcga gcaatttttc tcgctcattt gggtgtattg
     1561 gattgtcatt tctttattgt tggcattttt gaattctaat tttctagata tttattatct
     1621 tcaatatcac ttttcaatca ttattttatc ggcacttatt ttaacgttta tcaatattgt
     1681 gcagtttacg gtgtctttaa tcatcgattc acgttatgaa aaacaaaata tgtttacact
     1741 attttattta agctggtacc ccactatcta ttgggttctc aatgcacttg tagcgatgtt
     1801 agcatttccg aaagcattgc tcagaaagaa aggtgaattt gcaacatggt caagtccaga
     1861 cagaggaaaa aaagattgaa acatagcata ttaaatttaa ttcgagaagt cattatcttt
     1921 tgcttctcta tttcattgtg gctttattgc ttgattgcat ttattttaat tatcggttca
     1981 ttattacgta ttagcgcaca ttcggtgtta ttaatacgaa cggtgctcaa tattgaacca
     2041 gactcaatga atcagatttt tgtaaaaatg gcgattttta tagtgattat cacaatgatt
     2101 tttactacaa gtatatgcgt tcatctatat cgcaataaga aagaaggcat taacgatggt
     2161 aaatttcttt aaacttttca tagccatagg gtgtgtcgtc tatacaatgg ctatggcact
     2221 tttcccaacg aatcaggcag aagcagaaac gcacaaactt aaagatgacg gcgataaaac
     2281 cgcactggcc ttaaattacc atagaatcag aaatgatgat tttttagatt tatttttatt
     2341 cattttttct aacagtaaag aaatttcaac ttatagtgtg agtaaagccg agtttgaacg
     2401 acaaatcaaa tggctcaaag cacatgatgc acacttttta acgcatgaag agttgattcg
     2461 ctataaacga gaaggccact ttccgaaacg aagcgtctgg attaattttg acgacatgga
     2521 cgagtctata tacaaaaatg catttcctat cttaaagaaa tatcaagttc ctgcgacagg
     2581 atttgtgatt actggcgaag ttggggctca aaactttcat aatttgaatt tatctactat
     2641 agacgaactc gaagaaatgg aacgctcagg cttatggacc tttcaatcac atacacatga
     2701 tttgcattca ttagaaaaaa cgaaatctaa aatgttaaca gtgagttcta aagtactgaa
     2761 atatgacttg caaacaagca atgattatct cgatcaacat ttcaatcgta aagaaacagc
     2821 cattgcctat ccttatgggc aagtgagcga tgaagcggta gaaataatta aagatagtgg
     2881 tatctcatat ggttatacgt tggaagaaaa agcaatgtct gtcgatgata aaaactacta
     2941 tattccacgt attttagtga gccaggacgc ttttaatgaa ttagtgaaaa aatggggtgc
     3001 tttcaatcat gacgcgtcgt aaaacaaagc tagaactcgt ctattttcga gcattcacct
     3061 gcatgcttat cattctgacg cacattttca ctgaatttat gcgtcatctt gatacgagta
     3121 atcttgctga actgaaactg atttattatt tgcaacacat tgtcattttc ggtacaccaa
     3181 gttttattat cttgtcccaa ttgttgacaa cattaaatta cgaaactatc aatgtaaatt
     3241 atatatggtc acgtgtgaaa tacattttgc tgccttactt tatcgtaggt gcattttatt
     3301 gttttagtga gagcagaatt accgcaacat catttacaca tcaactgttc gaaaatttat
     3361 tgcttggacg ttggcacggt tactttatta tcgtcataat gcagttcgtc ttactaagct
     3421 atgtcatttt taaagtatcc ccaaaaatat ttgatagtaa aattttgctc gctctttcct
     3481 ttatcattca gtttagtttt ttacatcaat ttgatacgaa tcctgcattt gccgaaaaat
     3541 ttatgtcgat ttatccatta agcgaaaaca catgtatgct cggctggatt ttctttttct
     3601 ttttcggggc ttatattggt aggaggtata atgcagttat caatttttta cgtcaatacg
     3661 tctttattat tatcacttta gcgattttat catttggcgt gtttgttata tttcaacagc
     3721 atgattatgg atgggtgaca agctttaatg aaaatttgat gttataccat acactgatgt
     3781 tcttgttgtt gctaagtctc tgtcttcatt tcaaacaaat gatgttaggt acaatcaact
     3841 tgattagtgc attttcattt ttcatttact tgttccatcc catcattttg agcacactgt
     3901 atgaatactt tttgaacttt gcagatttaa catttgtttt tatcgcgatt tcacttctct
     3961 atacacttgg tatttgtata ggtatcgggt tatttttacg agagtttcgc atttttcgat
     4021 tcgcaattgg caaacagccc tataatttaa atattcaact gtcttaattt tgggttaaat
     4081 acgttttgat gagtggttga agttgttgga gtatttcttg ttgtgacaac gtctccgcat
     4141 gctcacccca aaatgacaat gcagaacctt gaatattcgg ttgggcgacg acatgatgtg
     4201 catcattaaa ataattaaat cgattgtcag cataataacg ttcaataaat tgttgttgct
     4261 gttgaatcgt ttgtttagaa tgttgagacg atggtaaaaa atataaagtt gatgcattgt
     4321 agttaaacac agagatattt gcttttgcca aatcctctac atgtgcttgc tgacgatgtg
     4381 tggcttcgtg ttgattccaa tataagacag aaacatgtgc atctaactgc tgaacacctt
     4441 gctttgtaag gctatcattc caaatttggg gttggtagcc tttatttttt gctgtttcag
     4501 ctaatttatt catgaaatgt acgaatgctt tttgatggtc catcgctcca ggcacctcat
     4561 ctcctccaat aacaattcgt tgttctcctt taaattttgg ctgttcaaac aacgacatca
     4621 cgtcttttaa atattcgctg ctccatttga ctgcttcttg attatcaaaa tagtctacag
     4681 tgttcgtact aaaatcggac acgaccgttt tatatcgagc tttatcttgt tttttcaact
     4741 gttgtagcaa cgcacccgca tgtgacggga aatcaatatc gggcactacc ataacgtcac
     4801 gcttattgct atatttgatg agcgttttaa tttcctcata tgacaatgta tcccgcttcg
     4861 ttggtgacat acctggtaaa tcaaccgcat ggtgttgatc gtcagcaaag tgcaactgta
     4921 aatagtcccc atcatatttt gctatcgtat caacaatctc tttaattgtc tccagcgaat
     4981 aatctttacg tgcaatatca atattcaccc ctttttgaaa tttaggtgcg actgcttcac
     5041 tttgaaacgt tgtgaagatg agcattaaac ttaaccctat tgaaaacccc cacttcattt
     5101 ttacaacctc ctttatgcat gttttcccgg gaaatgttaa gatggcagaa atatcgtgtc
     5161 tcgacgtcta cttttttatc tctttattac gtttacgcaa ttgaagtaaa gacaatatat
     5221 gtcacttttc aaatcaacac atccacccat aatacgcaat ccattccggt tatttttccc
     5281 ctctttatcg aaatcaaacc acgcatattt ttatataaaa acaagggtca cctccctttt
     5341 tcaaaagaaa agtgaccact ttttgctatt gttcatggcg aatgacttgt ttcggttgct
     5401 gttgtaaaaa tgaagtataa gaatcaatag ataaggcatc atcaacaaaa ataacgcgac
     5461 cgccaaaacg tgtacctgta ggcttcatat gatgtaatcg ataataaccg cggtgtgcag
     5521 aggcaaaata gcctgtcgtg taatgtaaat catccgatac acacaattcc cctttcactt
     5581 gtgcgaatgc tgtaatacac gtcgctatcg tcaaagcatc ttgaatacgt gaactaacaa
     5641 gcggtatacg cgcataatct tcaaagcaaa aatgggtcac ccgaacacct ttttctcctg
     5701 tttgatctaa acgctctccc gtttcagcag agacgatgat tgccccccta tattgcgtgt
     5761 catcaaaaat atatcccatt cctttgtcaa gcgcctcttt cgtaatccca tgcatttcac
     5821 acaacgcctc taatgtatgc gttgtatctt caataatcgg taaagcctca agtgtgtgca
     5881 atggttccgt aaccttttca atttttaaat tcaaaaaatc gacatcacca ttttcatgtt
     5941 gaaatccttt gtcaaaaaat gtttgtaaga ctgccggaat cttttgtgct tcacaaattg
     6001 tttcagcgcc actgatatga acgcccccct gattcgctct cattttaaca ctgtacatca
     6061 ttacaccccc ttgcaacgtg caagcaataa ttgctcaaac aaatattcca aatcatgggc
     6121 atcgtgaaat aatgaaagtg acacgcgcaa tattggccgg gtaacagtcg gatatataaa
     6181 atagctcacc catattcctt gtgccaacaa cgcttgatag acacattcga tctcatgatc
     6241 atcatcaaaa gaaatccact taatcggcgt ccttgagtgg ccttcgtatg gcacgccaaa
     6301 gtcacgttca tataactgat tgaatgtatc acttaattga tgcaatacgt gtgccttttc
     6361 aggttgtgcc aacattattt tcaaattttc gtatagctga gctaactgaa gttgtggtaa
     6421 tgcattagaa taaatgactg gtcgtgcgac attaatgagc acttgtttaa aaagtgctga
     6481 acataaaatc gcgccaccat gcgcacctac acctttggat aaactggtcg ttaaaatatc
     6541 aatatttgaa taatgtgtat gcaagcgaag accaaaagcg tgtgcatcat ctacaacgag
     6601 ccatatattc ggtatttttg cttttaactg aacaagtgcg tcgagtttcg cgaaagcacc
     6661 atcagtagaa aagacgctgt ctgtcacgat aactttggtc aacgtttcag gatattgaag
     6721 taatgctttt tccaacgcta cgacatcatt gtgcggataa ataactttct taagcctact
     6781 caatcgtatc ccatcaatga tactcgcatg attggcctca tcagaaaaca ccaccaccgc
     6841 ttcatcttga aaagcttgca ttaccgctaa gttagcatca taaccactcg tcgtgaccaa
     6901 tgcatcttca aaatgaaagt gtgtgcttag caaccgttca atcttcgtat atagtgctga
     6961 gttaccactc actaatcgtg aacttgcgag atgcttttgt cccttttctg acatcccatc
     7021 agcgtgtgtc atttgtccta aacctaaata gtcattcgag gtaaaattca aaaaacgacg
     7081 cccttgcacc gttaaccact taccatcgac cgcttccact tcacgcaatt gacgtaattg
     7141 acccttagct tggatagcat ctaatttgcg ctgaaaatcc atcactaacg ctcctttaaa
     7201 acatgatgta atgccttttt aaatatgcga accatctttt taatttcacg attggacata
     7261 cttaggacag gcacaaaggt gataatattt tctaaatttc taatcatcag tccttcttgc
     7321 ttacatttcg caatcatcgc ttccacttgt gcaatatcaa gaggtgtctt gtctgaacaa
     7381 ttttctacaa gctccacagc gtacattaac cctctcccac gtatattacc tacatgcgga
     7441 tgcgcactca atgtctctaa agatttacgt aaagtagtcg acgtcttttc aatatgatgg
     7501 atgagatgac gtgtttgaaa caggcgaata ttttcaagcg caacagcaca aacgacttga
     7561 ttgcccgtat atgtatggcc gtggaaaaag gtctgtttcg catgtgcatc acttaaaaag
     7621 gcatcgtaaa ccgcttggga cgttaatgtt gcggctaatg ggacataacc acctgtcatg
     7681 gctttgccta aacacatcaa gtcaggttgg acgtcttcat gctcacaggc gaacattttg
     7741 ccagttcgac caaatccgac cgcaacttca tccactatga gtaaaatatt gtactttcta
     7801 cacagttgtt cgactgcttt caaaaatccc tctggatgta cataaagtcc tgttgcgcct
     7861 tgaatcagcg gctcgatcac aaagcctaca atttcgtctg cacgcgcttg taaaatagcc
     7921 tcaatttgtt ttaatatgtc gtccaccatt gctgcttcag atgggtagtc actatggtaa
     7981 aaagacgggc atggcacttg aatgttctcg aaaatcaagt ctttgaaaat gcggtgaaac
     8041 gtatcaatcc caccaacact gaccgagcca attgtgtcgc catgatacgc ttgatgcagc
     8101 gtcaaaaact tatttttctt ggcatatctt tccgcgtcca aatttttcca atattgatag
     8161 gccatcttaa tcgcaatttc cactgctgca cttcctgtat cagaataaaa cactttttgt
     8221 aagcgttcag gcgtcatcgt caccaattgt tcagcaagta aaatggacgg cacgttagat
     8281 gaaccgagta acgttgaatg cgcaatctga ttcagttgac gctgtatcgc acggttgagc
     8341 tgtcgatttt ggtgaccatg gacatttacc cataacgacg cgtaaccatc tagatacttg
     8401 cgacctctcg tatcatacaa atagcttcct ttcccttttt caatgatgat aggatcttgt
     8461 tgattgtaca tgcccatttg tgtaaaagga tgccatacat aatcacggtc cttctgtact
     8521 aaagtttcat gtttcatatg ttatcactcc tttaatttga tcgaacaacg tttcagaaaa
     8581 atctctatcc gtacctgctt ctggaaatac ttcgacatga cgtcccgtta ttttttcaat
     8641 cgttttatgg ttatcctgct caatgggtgt atcggtgtat cgattcatta catataatcc
     8701 tttagggagt tgcatcgtcg tcaaataatg atgatgaacg agcgcatcac tgatcgcccc
     8761 taactgtgaa ggcaaaacgc tgatgacacc atccgcgacg tcacgaatga aatctgctgt
     8821 catataaaat gtcgtttcat cttcatataa tggtacccta atgcctcctg cgccctctat
     8881 gagcaacaca tcacattgcg catgccaagt ctgaacccat gccttaattg ccatacgatc
     8941 tagttgttga tgtggttcta acttgaatgc caaatgcggt gatactggtg ctgcaaacat
     9001 ataaaaagac gtatcagcat acgacagacc acacattttt tgataacttt ctaaatcagg
     9061 gtacttgcca tcaggtaaca cttccgtttg aaatggctta ataatatgca cctttaaccc
     9121 tttgcgtgtc aggtaatgat acagatgggt tgtcacgtat gtttttccga catccgtatt
     9181 cgtacttgtt ataaacaatt tcatcgctat cacctcattc ttgtcgttgt atactgttca
     9241 tatgttactg ctttcaaacc tcattgtaaa catattttat atttaagttt acatttaaaa
     9301 tttgtggcca tatttactac agatactatg atgtgtcgca
//
LOCUS       DANHPA010000093         9318 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.093, whole genome shotgun sequence.
ACCESSION   DANHPA010000093 DANHPA010000000
VERSION     DANHPA010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 9318)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9318)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9318
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.093"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            24..3473
                     /locus_tag="PTC28_001905"
     CDS             24..3473
                     /locus_tag="PTC28_001905"
                     /EC_number="6.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate carboxylase"
                     /protein_id="HDK5717179.1"
                     /translation="MKRIHKLLVANRGEIAIRIFRAATELNIKTVAIYSKEDMGSLHR
                     YKADESYLVGENLGPAESYLNIEQIIKVAKEANVDAIHPGYGFLSENMQFAQRCAEEG
                     IVFIGPHVEHLDMFGDKVKARATAIKADLPVIPGTDGPVAGFEEAQTFAEKAGFPLMI
                     KATSGGGGKGMRIVREPSELQEAFTRAKSEAEKSFGNSEVYIEKFIDQPKHIEVQVMG
                     DEAGNIIHLYERDCSVQRRHQKVVEVAPSVSLPDNLREQICEAAVDLMRQIQYVNAGT
                     VEFLVSGNEFYFIEVNPRVQVEHTITEMITGVDIVKTQILIADGQLLHDDAIAMPQQS
                     DIRTLGYAIQCRITTEDPTQDFMPDTGRIVAYRSSGGFGVRLDAGDAFQGAEISPYYD
                     SLLVKVSTHAISYKEAREKMARSLQEMRIRGVKTNIPFLRNVIQHAKFASGDYTTKFL
                     EEAPELFTIKTSRDRGTKTLEYIGNVTINGFPSVEKRPKPHFEKPHIPTTDTKAIASL
                     SGTKQLLDAKGPDAVTAWVKAQEDVLLTDTTFRDAHQSLLATRVRTHDLLKIAPETAQ
                     VMKDNFSLELWGGATFDVAYNFLKENPWERLEKLRKAIPNVLFQMLLRASNAVGYRNY
                     PDNVIQKFIAESADAGIDVFRIFDSLNWLEQMKVANEAVQKAGKISEGTICYTGDILN
                     PERSNIYTLDYYVKLAKELEREGFHMLAIKDMAGLLKPRAAYELIGELKAAVDLPIHL
                     HTHDTSGNGILTYKEAIEAGVDVIDTAVAAMSGLTSQPSSNSLYYAMSGFERNIRMDI
                     EGHETLSHYWDAVRPYYSDFESDMKSPHTEIYQHEMPGGQYSNLRQQAKSLGLGERFS
                     EVKDMYRRVNFLFGDIVKVTPSSKVVGDMALYMVQNELDETSVIEQGHKLDFPESVVS
                     FFRGDIGQPVNGFNETLQRVILKGQQPLTARPGEYLAPIDFEALREELQEKQQAQVTE
                     QDLISYALYPKVYEQYMQTYEMFGNVSKLDTPTFFFGMRNNEKIQIEIDKGKILIVEL
                     KTITEPDENGVRTVFFDMNGQARRIQVKDENIQTSHLAKMKADKSNPNHIGAQMPGTI
                     IEVNVAEGDQVEAGQSLIISEAMKMETTVQAPFKGTISKIYVAANDSVETQDLLIEIE
                     PEV"
     gene            complement(3611..4525)
                     /locus_tag="PTC28_001906"
     CDS             complement(3611..4525)
                     /locus_tag="PTC28_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme A synthase"
                     /protein_id="HDK5717180.1"
                     /translation="MFKKRNLKWLAVVTTLIMTWVQLGGALVTKTGSEDGCGSDWPLC
                     HGALLPQNLPIETIIELSHRAVSGLSVIFVTWLVITSWKNIGHIKEVKPLGVISIGFL
                     LVQALIGAAAVMWQQNDYVLALHFGISLISFSSVFVLTLIIFDMDKKYEANKVHIRKP
                     LQRYTWLMTIVVYLTIYTGALVRHTDSSLAYGAWPLPFNDIVPHDVHDWVQLTHRLMA
                     MVAFFIIMFTYIHAVKHYPTMRTIHYGYTVSFILIILQVLTGALSIVTNVNLIIALLH
                     ALFITLLFGMISYFILLILRTNRGDQQA"
     gene            4737..5648
                     /locus_tag="PTC28_001907"
     CDS             4737..5648
                     /locus_tag="PTC28_001907"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX farnesyltransferase"
                     /protein_id="HDK5717181.1"
                     /translation="MSKSEVVSQTSGRITYKELKQIIKLGLVQGNLIPSFAGAWLAIV
                     MTHHAFLAAIPQIIVMIIGSTLVMGGACALNNFYDQDIDQLMPSKQNRPTVNNRISDR
                     HLLLLSFGMMVVGEILLFMLNMQAGVIGLVGIVGYVSFYSIWSKRHTTWNTVIGSVPG
                     AVPPLIGWVAIEGHLSLMAWALFLVVFCWQPIHFYALAIKRKDEYATARIPMLPSVKG
                     FSRTRVGMFLWLIALLPLPFLMQDLGVVFVVLATLLNVGWIALGLTSFKSSANETKWA
                     TKMFIYSLNYLVLFFALVVVISLIQLI"
     gene            5676..6137
                     /locus_tag="PTC28_001908"
     CDS             5676..6137
                     /locus_tag="PTC28_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002457433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF420 domain-containing protein"
                     /protein_id="HDK5717182.1"
                     /translation="MNVPILPTLSTTCIVISAILVAIGWRLIWKRQIERHKKTMLWAA
                     IFAVVFFTIYASRTIFIGNTAFGGPDSVKVYYTIFLVFHITLATVGAILGLIQIFTGL
                     KDRYSVHRKIGPVASVIWFFTAITGVAVYILLYVLYPGGETTSLIKATFGL"
     gene            6782..7852
                     /locus_tag="PTC28_001909"
     CDS             6782..7852
                     /locus_tag="PTC28_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP-like extracellular protein"
                     /protein_id="HDK5717183.1"
                     /translation="MRRKLIKVLAVLLLVGFLVYLFYSPQLEFDVLENPNRANHQQPE
                     KPKNVNQNEGQNPPLESGVGTYIGKSLNQITSQFGTPDRIYSFQQGYRKYIYKGDKRY
                     IIFAVKDDKVKSVYVTGKNTEKLTGPIKINEQASDLFDKFSINTEPQFKVNGQTYHYE
                     LSDKDVKTQALIQFDDTFAQVFIDQQKNKVLGLRYLDKEALADMNPYAQNNEETTSQE
                     TEASEEEGARPADQNVNERLTLYELTNEMRQLNERQPLKVNDTLENVATVDLFNYGNQ
                     KNTEFTEENLINLMKQTPLNYQSVSQNVGYNFNDVPTLVHSWINSDVHRSRMLNAKYV
                     EMGGEVQYQYYMLIFLEKGENA"
     gene            7854..8294
                     /locus_tag="PTC28_001910"
     CDS             7854..8294
                     /locus_tag="PTC28_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF family regulator"
                     /protein_id="HDK5717184.1"
                     /translation="MYDEPLMKVLDQTDDLADQIRQSDLFITYQKAKQALVEDREAQR
                     LYGQFLKSKINYDEVQRFGRYHPDYQEVMLTTRRLKREYEMHDTVVAFKQSETALQQL
                     LDEIVTMIATSVSEHVKIDAGTPLFEALTTGGGCATGATCQCRV"
     gene            complement(8359..9291)
                     /locus_tag="PTC28_001911"
     CDS             complement(8359..9291)
                     /locus_tag="PTC28_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HDK5717185.1"
                     /translation="MTRKSQILKGMLFGAVSMVTGALLIQKTTKTPTLRTIPSFFSGQ
                     APYLFSHRGGMGERPESTALAFDYSVQMQLTGFETDIRISKDEQVIVFHDAEVDRTTN
                     GSGPVSAHTLDALKALDAGYHFKDINGDRPYQNHPDAKILTMGELLSRYPEQLVNIDI
                     KDHPDSYEGQIAAQRLYDVIVQHEAKSRVLVTSFYREQIERFHKISQGTVAIGASQAE
                     VTEGILKLYSGLKHFYHGKAQTFQMPTHFHGIPLVQPKLIQWLNNTNRMPGYYDVNSV
                     DLMHHLVSLGVHTIVTDRPSLGRQFLTAYRQQQP"
BASE COUNT         3025 a         1619 c         1939 g         2735 t
ORIGIN      
        1 ccactattaa ggaggttcac ttcatgaagc gtatacataa attattagtc gctaaccgcg
       61 gtgaaattgc tattcgaatt tttcgagccg caacagaatt gaatattaaa acggtagcta
      121 tttattctaa ggaagatatg gggtcattac accgatataa agcggacgag tcttatttag
      181 tcggtgaaaa cttaggtcca gcagaaagtt atttgaatat tgaacagatc attaaagttg
      241 ctaaagaggc gaatgttgat gccatccacc ctggttatgg gtttttgagt gaaaatatgc
      301 agtttgctca acgctgtgct gaagagggaa ttgtttttat cggtccacat gtcgaacatt
      361 tagatatgtt tggggataaa gtgaaagcac gtgccactgc aattaaagct gatttgcctg
      421 tgattccagg tacagatggc cctgtggcag gatttgaaga ggcacaaacg tttgcggaaa
      481 aagccggctt tccgttgatg attaaagcaa caagtggcgg tggcggtaaa gggatgcgta
      541 tcgtcagaga accatctgaa ttacaagagg cgttcactcg tgctaaatct gaagcagaaa
      601 agtcatttgg caatagtgaa gtgtatattg aaaaatttat tgatcaacca aaacatattg
      661 aagtacaagt gatgggtgac gaagcgggca acatcattca cctttatgaa agagactgct
      721 cggttcaacg ccgtcatcaa aaagtggttg aagtagcccc atcagtcagc ttaccagata
      781 atttgcgcga acaaatttgt gaagcggctg tcgatttaat gcgccaaatt caatacgtga
      841 atgcaggaac ggttgaattt ttagtttctg gcaacgaatt ttactttatt gaagtgaatc
      901 cacgtgtaca agttgaacat accattacgg aaatgattac gggtgtcgac attgttaaaa
      961 cacaaatttt gattgcagat ggccagttat tacatgacga cgcgattgca atgccgcaac
     1021 aaagtgatat tcgcacgtta ggttacgcaa ttcaatgccg tattacgact gaagatccaa
     1081 cgcaagattt catgccggat acagggcgta tcgtggccta ccgatcgagt ggagggttcg
     1141 gtgtccgttt agatgctggc gatgcattcc aaggggcaga aatttcaccg tattacgatt
     1201 cactactcgt taaagtgtct acgcatgcaa tcagttataa agaagcaaga gaaaaaatgg
     1261 cacgctctct tcaagaaatg cgtattcgtg gtgtgaaaac gaatattcca tttttacgta
     1321 atgtgattca acatgccaag tttgcttcgg gtgattacac gacgaaattt ttagaagagg
     1381 caccagagtt attcacaatt aaaacgtcac gtgatagagg tacaaaaacg ttagaatata
     1441 tcgggaatgt aacaattaac ggctttccaa gtgttgaaaa aagaccgaag cctcatttcg
     1501 agaaacctca tattccgacg acagatacga aggcgattgc ttcattaagt ggtacgaaac
     1561 aattacttga tgcaaaaggg cctgatgccg taacagcatg ggtgaaagca caagaagacg
     1621 tattgctcac tgatacgaca ttccgtgatg cacatcaatc tttgctcgca acacgtgtga
     1681 gaacgcatga tttactcaaa attgccccag aaactgcaca agtgatgaaa gataacttct
     1741 cacttgaatt atggggtggc gcgacgtttg atgtcgccta taatttcttg aaagaaaatc
     1801 catgggaacg tctcgaaaaa ttaagaaaag ccattccgaa tgtgttattc caaatgttat
     1861 tacgtgcttc taatgcagtc ggttatcgca attaccctga caatgtcatt caaaagttta
     1921 ttgcggaaag tgccgatgca gggatcgacg tctttagaat atttgactca ttgaactggt
     1981 tagaacaaat gaaagtcgct aacgaagcag tccaaaaagc cggtaaaatt tctgaaggaa
     2041 cgatttgtta tacaggtgat attttaaatc ctgaacgttc taatatttat acgttggact
     2101 actatgtaaa actcgcgaaa gagctagagc gtgaaggttt ccatatgtta gcgattaaag
     2161 atatggcagg attattgaaa ccaagagccg cctatgagtt aatcggtgaa ttgaaagcag
     2221 ctgttgacct gccgattcac cttcatacac acgatacgag cggtaacgga atcctcactt
     2281 ataaagaagc aatcgaagcg ggcgttgacg tcattgatac ggcagttgcg gcaatgtcag
     2341 gtttaacaag tcaaccaagt agtaattcat tgtattatgc catgagtggt tttgaacgta
     2401 atattcgtat ggatattgaa ggccatgaaa cactttcgca ttattgggat gcagtacgtc
     2461 cgtattatag tgattttgaa agtgatatga agtcgccaca tacagaaatt tatcaacatg
     2521 aaatgccagg gggccaatat tctaacttac gacaacaagc gaaaagttta ggactcggtg
     2581 aacgtttcag tgaagtgaaa gacatgtacc gacgtgtcaa cttcctcttc ggtgatattg
     2641 tgaaagtgac accatcatca aaagtagtcg gcgatatggc gctctacatg gtacaaaatg
     2701 aattggatga aacgtctgta atcgagcaag gccataagtt agatttccct gaatctgtgg
     2761 tctctttctt tagaggcgat attggtcagc cagtgaatgg atttaacgag acattgcaac
     2821 gggtcatttt aaaaggccaa caaccattaa ctgcacgtcc cggtgaatat ttagcaccga
     2881 ttgatttcga agctttacgc gaagaattac aagaaaagca acaagctcaa gtgacggaac
     2941 aagacttaat cagctatgca ttgtatccaa aagtgtacga acaatatatg caaacttatg
     3001 aaatgtttgg caatgtttca aagttagata caccaacatt cttcttcggt atgcgtaaca
     3061 acgagaaaat tcaaatcgaa attgataaag gtaaaatttt aatcgttgag ttgaaaacca
     3121 ttacagaacc tgatgaaaat ggtgtgcgta ctgtattctt tgatatgaat ggtcaagcgc
     3181 gtcgtattca agtgaaagac gaaaatattc aaacgtccca tttagcgaaa atgaaggcag
     3241 ataagagcaa tccaaaccat atcggtgcac aaatgccggg tacgattatt gaagtaaatg
     3301 tcgctgaagg agatcaagtt gaagcggggc aatcactcat tattagtgaa gcaatgaaga
     3361 tggaaacaac agtacaagcg ccgtttaaag gaacgatttc aaaaatttat gtggctgcaa
     3421 acgatagcgt cgaaacccaa gatttactca ttgaaattga accagaagta tagaggtaaa
     3481 tttggaagat taacgataaa accgacattt attattttat ccaggatatg gaaacccgaa
     3541 taacaaagca atcaaaaaga catcaaacaa cgatttttgc tgtttgatgt cttttaaaac
     3601 ttgtatcatt ttaagcttgt tgatctccac gattcgtacg taggattaac aagatgaaat
     3661 agctaatcat accgaacagt aacgtgataa ataacgcatg aagtaaagcg atgattaaat
     3721 tcacgttagt cacgatagag agtgcccctg ttaaaacttg taaaataatt aaaataaagc
     3781 tcactgtata accgtagtga atcgttctca ttgttggata atgtttgact gcatggatat
     3841 acgtgaacat aatgatgaaa aacgctacca tcgccatcag tctgtgtgtc agttgaaccc
     3901 agtcatgtac atcatgaggc acaatatcgt taaatggtaa tggccatgca ccgtatgcaa
     3961 gacttgaatc tgtatgtctg acaagtgcgc cagtataaat cgttaaatat acaacaatgg
     4021 tcatcaacca cgtatagcgc tgcaatggct tacggatatg gactttattg gcttcatatt
     4081 ttttgtccat gtcgaaaatg attaatgtca acacgaaaac ggacgagaag ctaataaggg
     4141 aaatgccgaa atgaagtgcc aatacataat cattttgttg ccacatgacg gcagcagcgc
     4201 cgattaaagc ttgaacgagt aaaaagccaa tgctaatcac acctaaaggc tttacttctt
     4261 taatatgccc tatgtttttc caagatgtaa tcacaagcca tgtcacaaaa attacagata
     4321 atccagatac agctctgtga ctcaattcaa taattgtttc tatcggtagg ttttgtggta
     4381 ataatgcgcc atgacatagc ggccaatctg aaccacaacc atcttcagaa cctgtttttg
     4441 ttacgagtgc accaccaagc tgaacccaag tcataatcaa cgtcgttacg acagcaagcc
     4501 actttaggtt tcgcttttta aacaatctca aacacctcat tatgtatcaa agttaaataa
     4561 tcgctattca tcaataccac ccacattata acaaaaactg aactaaaaaa tgtgaattta
     4621 tcatgacgtt ttttgaatgt cgttaaagtg tcacaaattt ttcttattta aactagtcat
     4681 tcgcgacact ttcatatatc ataaatgtat atgttatttt aagggggagg gaactgatgt
     4741 ccaaatcaga ggttgtatca caaacttccg gtcgtattac ttataaagag ctgaaacaaa
     4801 tcattaagtt aggtcttgtt caaggcaact taattccatc atttgcgggc gcatggttgg
     4861 ctatcgtcat gacacatcat gcatttttag ctgctattcc acaaattatt gtgatgatta
     4921 taggttctac gttagtaatg ggcggagcat gtgcattgaa caatttctat gaccaagata
     4981 ttgatcaatt aatgccaagt aaacaaaatc gaccaactgt taacaatcgt atttcagatc
     5041 gtcatttatt gttattaagc tttggtatga tggtcgttgg tgaaatatta ttgttcatgt
     5101 tgaatatgca agcaggtgtt atcggactcg ttggtatcgt tggttatgtc tcattttatt
     5161 ccatttggtc aaagcgacat acgacatgga atactgtgat aggcagtgtg cctggagcgg
     5221 taccaccatt aatcggttgg gttgcaattg aaggtcactt aagtttgatg gcctgggcat
     5281 tatttttagt tgtgttttgt tggcagccca ttcattttta cgcgttagca attaaacgta
     5341 aagatgaata tgcaactgca cgtattccaa tgttaccatc tgttaaaggt ttttcgcgca
     5401 cacgtgtcgg catgttttta tggttgatcg cattattacc acttccattt ttaatgcaag
     5461 atttaggtgt ggtcttcgtc gttttagcca cgttactgaa cgtcggatgg attgcattag
     5521 ggcttacaag ttttaaatcg tcagcgaatg aaacaaaatg ggcaacaaaa atgtttattt
     5581 actcattaaa ctatcttgtt ctattttttg cacttgttgt cgtgatttct ttaatacaat
     5641 taatttagaa gatctacgag tgaggaatga ataaaatgaa tgtacctatt ttacctacat
     5701 taagtacaac ttgtattgta attagtgcca ttttagtcgc tatcggttgg cgcctcatct
     5761 ggaagcgtca aattgaacgt cataaaaaaa cgatgctgtg ggctgctatt ttcgcagttg
     5821 tcttttttac aatttatgcg agtcgtacta tctttattgg taatacagca tttggaggac
     5881 cagattcagt aaaagtttat tacacgattt tcttggtttt ccacattaca ctagcaacag
     5941 tgggggcaat acttggttta atccaaattt ttacaggttt aaaagatcgt tacagcgttc
     6001 accgtaaaat cggacctgtc gcatcagtga tttggttttt tacagcgatt acaggtgtag
     6061 cggtatatat tttactttat gtgctttatc ctggtggcga aacgacgtcg cttattaaag
     6121 caacatttgg tttataataa aaaagcaaca gatgggaaat cattctgttg cttttttatt
     6181 tgcacattga agtcaatcat ttgatgaatc attgatatga atagagccaa tttaaaagta
     6241 agtgttttct attttaattt cgctcaatat cgttaaaaac aaaaaagagg taaaacacag
     6301 ccgcatgttt tactttaaac agtttccata accatacaat taattgtaaa tcaaaaggct
     6361 tttaaaaacc tggaaaaatc atagtgaata aataagggat tgtttataaa gtcagtcatc
     6421 aagctatttt gagattctaa ttaaatgtgt agaatttata gagcgtatga ggtatatagt
     6481 gctgacattt agagctcaac tgtcattgta cttcaattga agcatatgac aaggtgatga
     6541 agtttgatat gcgtgtatga caaaatttcg acgtctattt tgttaatagt agaaagtctt
     6601 tttcaacagt gatacgataa agtgaaatca gtgtattggt tattttttaa ctttgcccat
     6661 tcacaaagtg gttgaatgtt ttataatgaa aagtgagttt taaagtcgga taagtcaata
     6721 tgaacgattt tatctatatt aattgaaata aaacgataat gaaaatgagg ggggggaacg
     6781 tatgcgaaga aaattgatta aagtattagc ggtgttgtta ttagtcggct ttttagtcta
     6841 tttattttat tcccctcaac ttgaatttga tgtactagaa aacccaaatc gcgccaatca
     6901 tcaacaacca gaaaagccta aaaatgtgaa ccaaaatgag gggcagaatc cgccattgga
     6961 aagtggtgtc ggaacgtata tcggcaaatc acttaatcaa atcacatcac aatttgggac
     7021 accggatcgc atttattctt ttcagcaagg ctatcgtaaa tacatttata aaggtgacaa
     7081 acggtatatt atttttgcgg ttaaagatga caaagtgaag tctgtttatg tgacgggcaa
     7141 aaatacggaa aaattaacag ggcctattaa aattaatgaa caagcgtccg atttgtttga
     7201 taaattttca atcaatacag agcctcaatt taaagtgaat ggacaaacgt atcattacga
     7261 actatcggat aaagacgtta aaacacaagc tttaatccag tttgatgata catttgcgca
     7321 agtgtttata gatcaacaaa aaaataaagt actcggatta cgctatttag ataaagaagc
     7381 tttggcagat atgaatccgt atgcacaaaa taatgaagaa acgacgtctc aagaaacaga
     7441 agcatcagaa gaagaaggag cgcgtcctgc agatcaaaat gtgaatgagc gactcacgtt
     7501 atacgaatta acgaatgaaa tgcgtcaact gaatgaacgt caacctttaa aagtgaatga
     7561 tacgcttgaa aatgtcgcaa cggttgattt gtttaattat ggtaatcaaa aaaatacgga
     7621 atttacagaa gagaatttga ttaatttgat gaaacaaaca ccacttaact atcaatctgt
     7681 ttctcagaat gtagggtata actttaatga tgtccctacg ttggtacaca gttggattaa
     7741 ttcagatgtt caccgttcac gtatgctcaa tgcaaagtat gttgaaatgg gtggagaagt
     7801 ccagtaccaa tactatatgt taatctttct agagaaaggg gagaacgcgt aacatgtacg
     7861 atgaaccgtt gatgaaagta cttgatcaaa ccgatgactt agccgatcaa attcgccaat
     7921 ctgatttgtt tattacttat caaaaagcaa aacaagcttt agtggaagat cgagaagcac
     7981 aacgattata tggtcagttt ttgaaaagta agattaatta tgatgaagtg caacgatttg
     8041 gacgttatca ccctgattat caagaagtga tgctaacgac gagacgactg aagcgggaat
     8101 atgaaatgca tgatactgtt gtcgcattta agcaaagtga aacggcactt caacaattat
     8161 tggatgagat tgttacgatg attgcgacaa gcgtatcaga gcatgtcaaa atcgatgcgg
     8221 gaacgccgtt gtttgaagcg ttaacgacag gtgggggatg tgctacaggt gcgacgtgtc
     8281 aatgccgagt ttaagtaaat gaaaattgaa tatatcataa aagtggttag gaaatattat
     8341 cctaaccact tcactgtatt aaggctgttg ttggcgatag gcagtgagaa actgacgacc
     8401 gagtgatggg cgatctgtca cgatagtatg cacacctagc gacacaagat ggtgcattaa
     8461 atcgacacta ttaacgtcat aatagcccgg cattcgattc gtgttgttca accattgaat
     8521 cagcttcggt tgaacgagcg gaataccatg gaagtgtgtt ggcatttgga atgtttgcgc
     8581 ttttccgtga taaaagtgtt tcaaccctga ataaagtttt aaaatgccct ctgtcacttc
     8641 agcttggctt gccccaattg ctacagttcc ttggctaatt ttatggaaac gttcaatttg
     8701 ttcgcgataa aaacttgtga cgagcacccg tgatttagct tcatgttgta caatgacatc
     8761 gtataagcgt tgagcagcaa tttgtccttc atagctatct ggatgatctt taatatcaat
     8821 attcacaagt tgttcagggt aacgcgacaa aagctcaccc attgttaaaa tttttgcatc
     8881 tgggtgattt tggtaaggac ggtcgccgtt aatatcttta aaatggtaac ccgcatctaa
     8941 cgctttcaat gcatcaagtg tatgtgcgct aacgggccca gaaccatttg ttgtacgatc
     9001 cacttcagca tcgtgaaaga caatcacttg ttcgtcttta gaaatacgaa tatctgtttc
     9061 gaaaccagtc aattgcatct gcacagaata atcaaatgcc agtgcagttg actcaggacg
     9121 ttcacccata ccaccacgat gactgaatag gtaaggcgct tggccactga aaaatgacgg
     9181 tatcgttcga agtgtaggtg tttttgtagt cttttgaatt aatagggcac cagtcaccat
     9241 ggaaacagca ccgaatagca ttccttttaa aatttgcgat ttgcgtgtca tagtctaata
     9301 cctcctatag aataaagt
//
LOCUS       DANHPA010000094         9304 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.094, whole genome shotgun sequence.
ACCESSION   DANHPA010000094 DANHPA010000000
VERSION     DANHPA010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 9304)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9304)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9304
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.094"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(205..903)
                     /gene="mecA"
                     /locus_tag="PTC28_001912"
     CDS             complement(205..903)
                     /gene="mecA"
                     /locus_tag="PTC28_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adaptor protein MecA"
                     /protein_id="HDK5717186.1"
                     /translation="MRIERIDDMTVKLFITYTDIEARGFKREDLWTNRKRGEEFFWSV
                     MEEVNEEEDFVVEGPLWIQVHAFEKGVEVTISKSKNDDLMQMSEEDSAFDEFDSQLNE
                     LLSQSLKDEETDNHKDSEQSYRKRPSKNRTTTRTAIFKFEDLEDVIAYAHRNDQRLTE
                     FEDLLYMLDDTYYYVVHFDETVAETHIHDYYGQILEFTAPSDKTEFYLNDYGKIVMSH
                     NVVEQVKRYFPEAE"
     gene            complement(1294..1689)
                     /gene="spxA"
                     /locus_tag="PTC28_001913"
     CDS             complement(1294..1689)
                     /gene="spxA"
                     /locus_tag="PTC28_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator Spx"
                     /protein_id="HDK5717187.1"
                     /translation="MVTLFTSPSCTSCRKAKAWLQEHDIPYTERNIFSEHLTLDEIKQ
                     ILKMTEDGTDEIISTRSKTYQKLNVDIDALPLQDLYAIIQDNPGILRRPIILDDKRLQ
                     VGYNEDEIRRFLPRKVRTFQLQEAQRMVD"
     gene            2001..2990
                     /gene="trpS"
                     /locus_tag="PTC28_001914"
     CDS             2001..2990
                     /gene="trpS"
                     /locus_tag="PTC28_001914"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011276231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HDK5717188.1"
                     /translation="MQTLFSGIQPSGIPTIGNYIGALKQFVDIQDEYDCYFCIVDQHA
                     ITVPQDRLKLRKQIRQLAAIYLATGLNPEKITLFIQSEVPAHAQAGWMLTTISSIGEL
                     ERMTQFKDKSQKQSEGIPAGLLTYPPLMAADIVLYNTDIVPVGEDQKQHIELTRNLVD
                     RFNSRYNDVLTKPEIKMPEVGGRVMSLQDPTKKMSKSDDNPKNFISLLDEPKVAAKKI
                     KSAVTDSDGIIKFDKENKPGITNLLTIYSSLTGESIASLEDRYANEGYGKFKADLAEV
                     VENFLTDFQEKFNSFYESEELDKILDEGRDKAHRASFKTLKKMEKAMGLGRKR"
     gene            complement(3603..5267)
                     /locus_tag="PTC28_001915"
     CDS             complement(3603..5267)
                     /locus_tag="PTC28_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HDK5717189.1"
                     /translation="MKKQHRFKLLITSILSVLILAACGNNGGIYSDEGQVFRKVIAQD
                     MSSLDTAKVTDSVSFDKFNQVYEGLYTLDGHDNAQPGVAKGQPKISDDGKTWTIELRK
                     NAKWSNGDPVTAHDFVFAWRRVLDPDTASEYAYIMYDLKNAEQINTGKKKPSELGVKA
                     LDDYTLQFELEKPIPYYKEMLAFGTFLPQNEKVVKKFGDRYGTTAEKAVYNGPFKVKQ
                     WAVEDKILLVKNDKYWDKDVVKLDKINYKVLKDGQAGASLYDTESVDDTIISSEQVDK
                     YKGTPALQKRLLAATFYLKLNQDAVPALKNKDMRLALAKAVDKQAYVDAVLNNGSAPS
                     DGFTSKETAKAPDGKDYAEQIKSPLKYNPDEARANYEKAKKALGQSEFTFKMNTDDTP
                     ANKISAEFIKAQIEKNLPGVTIKIQQLPFKQRIAREQSGKYEISISGWGPDYPDAMTF
                     LNIMTTGNSSNNTGWSNKEYDQKIKDANGPLLSDVKKRNQTLVEAEELLLAEAPIAPI
                     YQKGEAHLTNPQVKNLQYHNIGGDTSLKYAYIDKSIDRETGKKKEK"
     gene            complement(5290..6231)
                     /locus_tag="PTC28_001916"
     CDS             complement(5290..6231)
                     /locus_tag="PTC28_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDK5717190.1"
                     /translation="MNEKEVLVEVKNLKQYFNQGKRNEVRAIEDISFKIFKGETFGLV
                     GESGSGKSTTGKAIIKLNDVTDGQVLYEGVNIQEIKKRKDLLKFNKKIQMIFQDPYAS
                     LNPRLKVMDIVAEGIDIHGLAKDSKDRKKRVYDLLETVGLRKSHANRYPHEFSGGQRQ
                     RIGIARALAVEPEFIIADEPISALDVSIQAQVVNLMQKLQRERNITFLFIAHDLSMVK
                     YISDRIAVMHLGRIVELGPADEIYHNPIHPYTKSLLSAVPQPDPDSERTRTRVAYEED
                     QTKNDQRRLVACAKDHYVFATDEELKQYQTEHQSVGV"
     gene            complement(6224..7303)
                     /locus_tag="PTC28_001917"
     CDS             complement(6224..7303)
                     /locus_tag="PTC28_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5717191.1"
                     /translation="MSERVLEINDLHVSFDIEAGEVQAVRGVDLYLDKGETLAIVGES
                     GSGKSVTTKAITKLFQGQTGRIKNGSIIFNGEDLTQKSEKELMKLRGKEISMIFQDPM
                     TSLNPTMKIGKQVMEPIVRHIGLSKAEAKKRAIELLKLVGLKHVEERFNAYPHQFSGG
                     QRQRIVIALALACEPKILIADEPTTALDVTMQAQILDLMKELQQKIDTSIIFITHDLG
                     VVANVADRVAVMYGGQMIETGDVNEIFYDPKHPYTWGLLSSMPDLGMADDTALMAIPG
                     SPPDLTRPPKGDAFAARSEYALAIDFKEAPPWFKVSPTHFVRSWLLDERAPEVEPPEM
                     VKRKQRPMPNNFAKPERVERVSFNE"
     gene            complement(7318..8379)
                     /locus_tag="PTC28_001918"
     CDS             complement(7318..8379)
                     /locus_tag="PTC28_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5717192.1"
                     /translation="MSNQERHLPQDDHSGATVAQTSGIMHEDFIRTGTPDRGEQEFQR
                     EGRTFWQDAWAQLKRNKLAVVGMIGLVIIILFALIGPLLNDHDFAEQDVQRRNLPAKI
                     AVLDKVPFLPFDGQGVEGNAYEKAHVTENFWFGTDQLGRDLWTRTWQGTQVSLFIGLV
                     AALLDIFIGVIYGAISGYFGGRVDDVMQRIIEIISSIPTLIVVILFVLIFEPSIWTII
                     LAMTITGWIGMSRVVRGEFLKLKNQEFVLASRTLGSSNLKLIFKHILPNTLGAIIVTS
                     MFTVPNAIFFEAFLSFIGIGVPAPRTSLGSLVNEGRAMLLIHPHELFIPAVVLSLLIL
                     FFYLFSDGLRDAFDPKMRK"
     gene            complement(8379..>9304)
                     /locus_tag="PTC28_001919"
     CDS             complement(8379..>9304)
                     /locus_tag="PTC28_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5717193.1"
                     /translation="LRYTLKRLLYMVISLFIIVTITFFLMKLMPGSPFNDEKLSEQQK
                     TILNEKYGLNDPLPVQYGNYMKNVVKGDFGNSFQYDNQPVWDLIKPRLVPSFQMGLFA
                     MVIGVILGVILGVIAATRQNTWVDYLATFISVIAISVPSFVLAVLLQYVFAVRLQWFP
                     VAGWEGLSTAILPSLALSAVVLATVARYIRAEMIEVLSSDYILLARAKGNSTARVLFG
                     HALRNALIPVVTILVPMLASILTGTLTIENIFGVPGLGDQFVRSITTNDFSVIMAITL
                     LFSTLFIASIFIVDVLYGLIDPRIRLQGGKK"
BASE COUNT         2764 a         1935 c         1549 g         3056 t
ORIGIN      
        1 ataattaaat atcatttggt accacgtcat taatcgtgaa ctaaggcaaa gcaagataat
       61 ttctgacttc attcttatgt cattgtagag aaactgcccc accgctctct tctaatatgt
      121 ataaaaagca ttgcgaaaga acacattaaa aaagaccaag cgctaatgac acttgatctc
      181 ttttggattt atttgatatt caatttattc tgcttcaggg aaataacgct tcacttgttc
      241 taccacgtta tgactcatca caattttacc ataatcattc aaataaaatt ctgttttatc
      301 acttggtgca gtaaactcta aaatttgtcc ataatagtca tgaatgtgcg tttctgcaac
      361 agtctcgtca aaatgaacaa cataataata cgtgtcatct agcatataaa gcaagtcttc
      421 aaattctgtg agacgttgat catttcgatg tgcataagca atcacatctt ctaaatcttc
      481 aaacttaaag atggcagtac gtgtcgttgt acggtttttg ctaggacgtt tacgatatga
      541 ctgttctgaa tctttatggt tatctgtttc ttcatctttc aacgactgcg acaacaattc
      601 attaagttga ctatcaaatt catcaaaagc gctatcttct tcagacattt gcattaaatc
      661 atcattttta gattttgaaa tggttacttc gacacctttt tcgaaggcat gtacttgaat
      721 ccataatggc ccttcaacta caaaatcctc ttcttcgttg acttcttcca ttactgacca
      781 gaaaaattct tctccgcgtt tacgattcgt ccaaagatct tcacgtttga atccacgtgc
      841 ttctatatct gtatacgtaa taaaaagttt tactgtcatg tcatcaattc gttctattct
      901 catatcatct cactccttac agtcgatgaa tagtaatcct attgtattaa acaacttcca
      961 aaaactcaat ctatttgtct gtctcataca atctttcacg aatgtcctat attaagtata
     1021 acacaatcta tttgtctgtc tcatacaatc tttcacgaat gtcctatatt aagtataaca
     1081 caatctattt gtcgcaccac ttttgtagct ttctctaggc tatgtctatt ttatgcctag
     1141 actgcacagt gacgatattg atggagcaag tcgttttaat tataagtagg atggggtgat
     1201 tgttacatgg ataaaaacag aaaaaggact ggaacgtcaa tagttctagt cctttgctat
     1261 ataactcacc attacaatgg gaagtcaata tgcttaatct accatacgtt gcgcttcttg
     1321 taattggaac gtacgtactt tacgtggtaa gaaacgacga atttcatctt cgttatagcc
     1381 cacttgtaat cgtttatcat ctaaaataat aggtcgacgt aaaataccag gattatcttg
     1441 aataatcgca tataaatctt gaagaggcaa tgcgtcgatg tccacgttta atttttggta
     1501 agttttagaa cgtgttgaga taatttcgtc cgttccatct tcagtcattt ttaaaatttg
     1561 tttaatttca tctaaagtta aatgttcaga aaaaatattt cgctccgtat acggaatgtc
     1621 atgttcttgt aaccatgctt tcgctttacg gcaagatgtg caacttggtg aagtaaataa
     1681 tgttaccata catctcactc tcctaattta atgaaaatga attcattgta atttaacgtt
     1741 tcaagattga ctgctcaaag tgtgttaaaa caattctaat ctttacgttt tcacttctaa
     1801 cgctatgatt ctattataca ccttaaacat taaaattaaa tgagaaaaat gcaaaataat
     1861 ccaatgattt caataatcag actttagtag tagtttcgtc aatctaatca ttacgttcat
     1921 catatcataa cttacaaacg atgaaaatac tgttacaata agagtatcga ttaaacacga
     1981 aagaaagtag gctatccatt atgcaaacgt tattttcagg aattcaaccg agtggtatcc
     2041 ccacaatcgg aaattacatc ggtgcattaa agcagttcgt cgatattcaa gatgagtacg
     2101 attgttattt ttgtatcgtg gaccaacatg cgattacagt acctcaagat cgtttaaagc
     2161 ttagaaaaca aattcgtcag ctggcagcga tttatcttgc gacagggctg aacccagaaa
     2221 aaatcacttt atttatccaa tcagaagtgc cagcgcatgc tcaagcagga tggatgttaa
     2281 caacaatctc ttctatcggt gagcttgagc gtatgacaca atttaaagac aaatctcaaa
     2341 aacaaagtga aggcattcca gctggattac tcacttaccc cccattaatg gcagcggata
     2401 tcgtcttgta taacactgac atcgtacctg ttggtgaaga tcaaaaacaa catatcgaat
     2461 tgacacgtaa tttagtagac cgcttcaaca gtcgctataa tgacgtttta acaaagccag
     2521 agattaaaat gccagaagtc ggcggtcgtg tgatgagttt acaagaccct actaagaaaa
     2581 tgagcaaaag tgatgacaat cctaaaaact tcatttcttt attagatgag cctaaagttg
     2641 ctgcgaaaaa gattaaaagt gccgtgacag attcggatgg gattatcaaa ttcgataaag
     2701 agaacaagcc aggcattacg aatttattga cgatttattc tagcttaacg ggtgaatcta
     2761 ttgcgtcatt ggaagaccgt tatgcaaatg aaggttacgg taagttcaaa gcagatttag
     2821 cagaagtggt tgaaaacttc ttgacggatt tccaagagaa gttcaatagt ttttatgaat
     2881 cagaggaatt agataagatt ttagatgaag gccgcgacaa agcacatcgc gcatcattta
     2941 aaacattgaa aaaaatggag aaagcaatgg ggttaggacg taagcgataa agtgcatctc
     3001 ttgaatccat attagtattc ccctctttct taaaaagtaa agttgcaagt ctatagatta
     3061 cttcctaggt ctcgcgttcc caagggactt gccttaacta aatttgggag cagtacagaa
     3121 atcgcatgtg tcgcaaagat ttcgtcgtac tgcccccgca aggctgacta gacttctcaa
     3181 aagtatatgc attgagaagt cagacagcta ctgcgttaaa cagtagccac tatcaaagtt
     3241 aaatgacgtt attttgtttt caacttcatc cctcgggagc ctcgacctag tcgctatcag
     3301 acttacaact gctttaattt caacatctct ttttatttca cattcctatt cctttgttac
     3361 tctgcttatt atcataatgc cttcactttt ttctatcttt aacaattcat ttgatgtgca
     3421 gataactttt ttaatttatc tcaagtttat tgctttatcc tatgattcat actcgtttat
     3481 tctcaaagtt ttgttcctct gtttttataa ttctgaccat ttgcaactta ttcccacaaa
     3541 aaagcgtgtt actgcatagg ataaacctaa acaataacac actttttaac tcattctttc
     3601 aattactttt ctttcttctt acctgtttct ctgtcaatac tcttatcgat ataagcgtat
     3661 tttaacgaag tatctccacc aatattatga tattgtaagt ttttcacttg tgggttcgtt
     3721 aaatgtgctt cacctttttg ataaattggt gcgataggtg cttcagctaa taaaagttcc
     3781 tcagcctcca ctaaagtttg gttacgcttt tttacgtcac ttaacaacgg tccattcgcg
     3841 tctttaattt tttgatcata ttctttatta ctccaacctg tgttgtttga tgaattacct
     3901 gtagtcataa tgttgaggaa agtcatcgca tctggataat ctggccccca acctgagata
     3961 gaaatttcat attttccact ttgttcacga gctatgcgtt gtttaaatgg caactgttga
     4021 attttgattg tcacacccgg taaatttttc tcaatttgcg ctttaataaa ctctgctgag
     4081 attttgtttg ctggtgtatc atctgtattc attttaaacg tgaattcact ttgacctaaa
     4141 gctttcttcg ctttttcata gttggctctt gcttcatctg gattgtactt taatggtgac
     4201 ttgatttgtt ctgcataatc tttaccatca ggagcttttg ccgtttcttt tgatgtaaac
     4261 ccatcgctcg gtgcagaacc attgtttaac actgcatcaa catacgcttg tttatcaacc
     4321 gcttttgcca atgccagacg catatcttta tttttcaatg caggcacagc atcttgattt
     4381 aatttcaaat agaatgtcgc cgcaagtaaa cgtttttgta atgctggtgt tcctttatat
     4441 ttatccactt gttctgatga aattatcgta tcatcgacgg attctgtatc ataaagtgac
     4501 gcacctgctt gaccgtcttt taacacttta tagttaattt tgtcaagttt gacaacatct
     4561 ttatcccaat atttgtcgtt tttaactaat aaaattttat cttctacggc ccattgtttc
     4621 actttaaatg gtccattata cacggctttt tcagcagttg taccgtaacg atcgccgaat
     4681 tttttcacga ctttttcatt ttgtggtaaa aacgtaccga acgctaacat ttctttataa
     4741 tatggaatcg gtttttccaa ttcaaattgt aaagtgtaat cgtctagagc cttcacacca
     4801 agttctgaag gtttcttttt acccgtattg atttgttcag catttttcaa atcatacata
     4861 atatatgcat attctgaagc tgtatctggg tctaatacac gacgccatgc gaagacgaaa
     4921 tcgtgtgccg ttacaggatc accgttcgac catttcgcat ttttacggag ttcgattgtc
     4981 catgttttgc catcatcaga aattttcggt tggcctttcg caacacccgg ctgtgcatta
     5041 tcgtgaccat ccaatgtata taaaccttca tatacttggt taaatttgtc aaaactaaca
     5101 gaatcggtca ctttggctgt atcgagtgag gacatatctt gcgcaatcac tttacgaaat
     5161 acttgtcctt catcactata aatcccaccg ttgttaccac aagctgctaa tataagtact
     5221 gataaaatag atgtaatcaa taatttaaat ctatgctgct ttttcaattg tgattccccc
     5281 ttcccgtctt tatacaccga ctgattggtg ttccgtttga tattgtttca attcctcatc
     5341 tgtcgcaaac acataatgat ctttcgcaca cgccactaat cgacgttgat catttttcgt
     5401 ttgatcctct tcgtaagcga cacgtgttct tgtacgctca ctgtctggat caggttgtgg
     5461 gacggcagac aataaagact tcgtataagg gtgaatcgga ttatgataga tttcatcagc
     5521 aggtccgagt tctacaattc gtccaagatg catcacggct attctgtccg agatgtactt
     5581 caccattgat aaatcatgtg caataaacaa aaatgtgata ttgcgttcac gttgtaattt
     5641 ttgcattaag ttgacgactt gtgcttgaat cgatacgtct aatgctgaaa ttggttcgtc
     5701 tgcaataatg aattctggtt ccaccgctaa tgcacgggca atcccgatac gttgacgttg
     5761 acctcctgag aattcgtgcg gataacgatt ggcatgactt tttcttaatc ctacagtttc
     5821 caacaaatca tagacacgct ttttacgatc tttactgtct ttcgctaaac cgtgaatatc
     5881 aattccttcc gcaacaatat ccataacttt taaacgtgga ttcagtgatg cgtatggatc
     5941 ttggaaaatc atttgaatct ttttgttaaa cttcaataaa tctttacgtt ttttaatttc
     6001 ttgaatgtta accccttcgt aaagcacctg tccatctgtc acatcgttca acttgatgat
     6061 tgctttacct gttgtcgatt taccagaacc tgattcgcct acaagtccga aagtttcccc
     6121 tttaaaaatt ttaaaagaaa tatcttcaat cgcacgaact tcattgcgtt tgccttgatt
     6181 gaaatattgc ttcaaatttt tcacttcaac taatacttct ttttcattca ttaaacgaca
     6241 ccctttctac gcgttctggt ttggcaaagt tgttcggcat tggacgctgc ttacgcttta
     6301 ccatttctgg cggttcaact tcaggtgcac gctcatctaa caaccatgaa cgaacaaaat
     6361 gtgttggcga cactttaaac catggcggtg cctctttgaa atcaattgcc aacgcatact
     6421 cactacgcgc cgcaaaggca tctcctttag gtggacgtgt taagtctggt ggtgatcccg
     6481 gaatcgccat taacgccgta tcatctgcca ttcctaaatc tggcatagat gaaagcaagc
     6541 cccatgtgta agggtgtttt ggatcataga aaatttcatt gacatcccca gtttcaatca
     6601 tttgcccacc gtacatcact gcaacgcgat ctgccacgtt cgccacgaca cctaaatcat
     6661 gtgtaataaa aataatagac gtatcaattt tttgttgaag ttctttcatc aagtctaaaa
     6721 tttgtgcttg catcgtaaca tcaagtgccg ttgttggttc atcggcaatt aagattttcg
     6781 gttcacatgc caatgccagc gcaatcacga tacgttgacg ttgaccacct gaaaattgat
     6841 gtggatatgc attaaaacgc tcttccacat gctttaagcc aaccaatttt aataactcta
     6901 tggcacgttt tttcgcttca gctttactta atccaatatg acgcacaatc ggttccatca
     6961 cttgtttccc aattttcatc gttgggttga gtgacgtcat cggatcttgg aaaatcatcg
     7021 aaatttcttt accacgtaat ttcatgagtt ccttttccga tttttgtgtt aaatcttctc
     7081 cgttaaaaat aatactaccg tttttaatgc gacctgtttg tccttggaat aatttcgtta
     7141 tcgctttcgt tgtaacagat ttccctgaac ctgactctcc aacgatggcc aacgtttcac
     7201 ctttatccaa gtacaaatca acgcctctca ccgcttgcac ttcccctgct tcaatatcaa
     7261 aggagacatg caagtcattg atttctaata cacgttcaga cattgtacat tcctccttta
     7321 cttacgcatc ttagggtcaa atgcatcgcg tagcccatca ctaaagagat agaaaaatag
     7381 aattaataaa ctcagtacca ccgctggaat gaatagctca tgcggatgga ttaatagcat
     7441 tgcacgtcct tcatttacaa gtgaacccaa tgacgttctt ggtgcaggta ccccgattcc
     7501 aataaaactt aaaaatgctt caaagaaaat tgcgttcggt acagtaaaca tcgaagttac
     7561 aataattgca cctagcgtat tcggtaaaat atgtttaaaa ataagtttta aattcgatga
     7621 gcctaatgta cgagatgcta aaacgaactc ttgatttttt aattttaaga attctccacg
     7681 tacaacacgg ctcatcccaa tccaacctgt gatggtcatc gctaaaataa ttgtccaaat
     7741 cgatggttca aaaattaaaa cgaataaaat cacgacaatt aacgttggaa ttgaagaaat
     7801 aatttcgatg atacgttgca tgacatcgtc aacacgacct ccaaaatagc cagaaatcgc
     7861 accgtaaatg acaccaataa agatatctaa taacgcggcc acaagaccga tgaagagtga
     7921 tacttgtgtc ccttgccatg tacgcgtcca taaatcacgt ccgagttggt ctgtaccaaa
     7981 ccagaagttt tctgtcacgt gtgctttttc ataggcatta ccttcgacac cttgtccatc
     8041 aaacggtaga aatggtactt tatctaatac tgcaattttc gcaggtaagt ttcgacgttg
     8101 tacatcttgt tctgcaaaat catggtcgtt gagtaatggt ccaatcaaag caaataaaat
     8161 gataatcaca agacctatca tcccaacgac agcaagttta tttcgcttca attgtgccca
     8221 agcatcttgc caaaatgtgc gaccttcacg ttggaattct tgttctcctc tatccggtgt
     8281 ccctgtacga ataaaatctt cgtgcataat tccagaggtt tgcgcaactg tcgcgcctga
     8341 atgatcatct tgtggtaaat gacgttcttg atttgacatt attttttacc tccttgcaag
     8401 cgaattcgtg ggtcaattaa gccataaagg acgtccacaa tgaaaattga agcaatgaac
     8461 aatgtactga acaacaatgt aatcgccata atcactgaga agtcattcgt cgtaattgaa
     8521 cgcacaaact ggtcaccaag tcctggtaca ccgaagatat tttcaatcgt taatgtccca
     8581 gttaaaatac tcgctaacat cggtacaagg attgtgacaa ctggaatcag tgcatttcgt
     8641 agcgcgtgcc caaataatac tcttgccgtc gaattccctt ttgctcgagc aagtaatata
     8701 taatcagaac tcaacacttc aatcatttcc gctcgaatat atcgtgctac tgttgccaaa
     8761 acaacagctg ataatgcgag agatggtagg attgctgtag ataacccttc ccacccagct
     8821 accgggaacc attgtaaacg taccgcaaac acgtattgta ataatacggc taatacgaat
     8881 gacggtaccg aaatggcaat aaccgatata aaggtggcga gataatctac ccatgtgttt
     8941 tgtcgggtcg ctgcaatcac cccgagtatc actcctaaaa tgacaccaat caccatcgca
     9001 aataagccca tttgaaacga cggtactaat ctcggtttaa taagatccca aacaggttgg
     9061 ttatcatatt ggaatgaatt tccaaaatct ccttttacaa catttttcat atagttgcca
     9121 tactgaacag gcagtggatc atttaatcca tatttctcat tcaaaattgt tttttgttgt
     9181 tcacttaact tttcatcgtt aaatggcgaa cctggcatta atttcatcaa gaaaaatgta
     9241 atggtaacaa tgatgaatag agaaataacc atatacagta aacgctttaa cgtatatcta
     9301 agca
//
LOCUS       DANHPA010000095         9165 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.095, whole genome shotgun sequence.
ACCESSION   DANHPA010000095 DANHPA010000000
VERSION     DANHPA010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 9165)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9165)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9165
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.095"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(140..415)
                     /locus_tag="PTC28_001920"
     CDS             complement(140..415)
                     /locus_tag="PTC28_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717194.1"
                     /translation="MQNYNATIKGENGKKAQKQLKTYNSEVEKHMKNQVSNDKFRSKC
                     STAISVSGLLHTGATTAAMTALGVSGPVGWGVGFGMAALYTAGSTLC"
     gene            complement(467..700)
                     /locus_tag="PTC28_001921"
                     /pseudo
     CDS             complement(467..700)
                     /locus_tag="PTC28_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613524.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(798..1445)
                     /locus_tag="PTC28_001922"
     CDS             complement(798..1445)
                     /locus_tag="PTC28_001922"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717195.1"
                     /translation="MLYYASTDNLWYGDDTNDIAVGVEACYFSDKERSRKSFDNACKI
                     AVFICKEYGINPRNQMPGHYQIQADKIVPKSVLEACGYSKDMSVVDKYVLKYLDGVAK
                     ESKPKESKPAPKPTSKATQKIPVKKQPKTAKRIKPWSEKAHYSGKIKYNASLRERSGD
                     SFNNYSFGHEKGILGKGETVYIFEEIQDEQGNIWCRMYTPANKSWVHKHTIAVSK"
     gene            complement(1449..2213)
                     /locus_tag="PTC28_001923"
     CDS             complement(1449..2213)
                     /locus_tag="PTC28_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HDK5717196.1"
                     /translation="MPIGYETKASEALRWAKRQRGIMHDGDGIWPGQCADWIIIFGKK
                     YFDWHFEGHAKDIISQKNRRKAPKGRKFIRNKETFVVQPLDICVWVKGKCGHVALGVE
                     GNLDLFKSLDQNWATHGNGSPVEEVIHNYDDLEFWGVIRLPFIDDLDIEKDSYVKTTK
                     GNGKMVKKYIGDWNGVPTYTEFLKIGTRRTGQRLDSGHPKFLVFHDTGNRNSTAQQNV
                     NYYNNTYNQPWATTVSAHVFVDDKECINCVPLDEKA"
     gene            complement(2261..2451)
                     /locus_tag="PTC28_001924"
                     /pseudo
     CDS             complement(2261..2451)
                     /locus_tag="PTC28_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613521.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2491..2889)
                     /locus_tag="PTC28_001925"
     CDS             complement(2491..2889)
                     /locus_tag="PTC28_001925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717197.1"
                     /translation="MAKVILGNRKITVQPSRFDIIINRSLGRVLGNHTYSSLTINDVS
                     YDIESMVVSDTSITVLLSNDQYNLSGVVTAKVVFFRDDSKTEWRVVVDVLPSLVRSAT
                     AEYDSNLLPTQSYVKRRGLNGTIVNRREVE"
     gene            complement(2901..3431)
                     /locus_tag="PTC28_001926"
     CDS             complement(2901..3431)
                     /locus_tag="PTC28_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717198.1"
                     /translation="MLEALRGRDGRSLEVIGADLDKEGNIIIKFSDNSYVTIPRGQRG
                     EGGEASAKGEAGQSITILSQRVEDGNILVKFSDETTLTIPKGQDGRDGVNGTNGLSAY
                     ELAKNSGFTGTIEEWLKLLKGEDDAKGERGEQGIQGKAGRDGQKGDIINLWAGTNDEY
                     DALSSISSTTLYLITY"
     gene            complement(3486..3833)
                     /locus_tag="PTC28_001927"
     CDS             complement(3486..3833)
                     /locus_tag="PTC28_001927"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717199.1"
                     /translation="MQTIVLNVLNLGDGNRIKQGDKSVMRYQLIDENDELSIVGKVEV
                     VYLYKSSKIIYKKETTVENIDDKDVVIVKIDDILPRGTYMLEIVVDDKYVFPSDESEK
                     IEVTKSILGRTFE"
     gene            complement(3920..4201)
                     /locus_tag="PTC28_001928"
     CDS             complement(3920..4201)
                     /locus_tag="PTC28_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HDK5717200.1"
                     /translation="MNKFKTNFGVRTRNPHFWAQMVASIFMPILVYYGVTAKQIASWG
                     TLFKLVTDAVSNPYVFATIGVSAYNVYADNTTPGFGDSVRALSYKKPKA"
     gene            complement(4668..4928)
                     /locus_tag="PTC28_001929"
     CDS             complement(4668..4928)
                     /locus_tag="PTC28_001929"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717201.1"
                     /translation="MIRGLIEKVEDVALRAIIAYIETQIDSHDQRIAKLEDNTKLSDE
                     QLSKVIAQIESDSETWKLIKKTFITTIVGGISGYILIRLGMK"
     gene            complement(4995..5255)
                     /locus_tag="PTC28_001930"
     CDS             complement(4995..5255)
                     /locus_tag="PTC28_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717202.1"
                     /translation="MAKEIQGKSTSYILVQVDSESNEKALMRDSYSGTYYATEELAFA
                     KSIKSVASAKKVESALEILHEDEDGESSITFKVMQVDVERKR"
     gene            complement(5275..5685)
                     /locus_tag="PTC28_001931"
     CDS             complement(5275..5685)
                     /locus_tag="PTC28_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1617 family protein"
                     /protein_id="HDK5717203.1"
                     /translation="MKLTLKNVEINKVSTFMYKLELKAKQSRSRTKFMRLLDEKQEEY
                     KEGNDELLSMYAVKDEAGQPKIVDNQYEFENGNLEKYIDERAELDNEEVIINLEDYPK
                     VFETLFKVLDELDIQLKEEDAVTYDRLCEVFRVE"
     gene            complement(5707..6192)
                     /locus_tag="PTC28_001932"
     CDS             complement(5707..6192)
                     /locus_tag="PTC28_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717204.1"
                     /translation="MFTNTEGTTSPAVVLGANRSGSVDPKRGDFAGIVAHSYANPYSS
                     TGIYSDKVYFDSHGGEPNTGGWTLENYRKSGKMRAFFGNNSVEYSYELGQANAQFYSV
                     WTQGLNDKFKLVTYRSGNAGLTSWNGRYGIVISNHSVELLYNNAVYDVGNILQDSTWK
                     V"
     gene            complement(6314..6559)
                     /locus_tag="PTC28_001933"
     CDS             complement(6314..6559)
                     /locus_tag="PTC28_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717205.1"
                     /translation="MSEIRRGSISAKFAAELRKEVANDFGGGQTDSLDYYFEKFMRHQ
                     VTKDLSKHTIKYYNERYSIYRKWRVDNDEDLTLDVIN"
     gene            complement(6906..6979)
                     /locus_tag="PTC28_001934"
     tRNA            complement(6906..6979)
                     /locus_tag="PTC28_001934"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6945..6947),aa:Gly,seq:tcc)
     gene            complement(7013..7087)
                     /locus_tag="PTC28_001935"
     tRNA            complement(7013..7087)
                     /locus_tag="PTC28_001935"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7052..7054),aa:Gly,seq:tcc)
     gene            complement(7102..7176)
                     /locus_tag="PTC28_001936"
     tRNA            complement(7102..7176)
                     /locus_tag="PTC28_001936"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7142..7144),aa:Cys,seq:gca)
     gene            complement(7185..7256)
                     /locus_tag="PTC28_001937"
     tRNA            complement(7185..7256)
                     /locus_tag="PTC28_001937"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7222..7224),aa:Gln,seq:ttg)
     gene            complement(7273..7345)
                     /locus_tag="PTC28_001938"
     tRNA            complement(7273..7345)
                     /locus_tag="PTC28_001938"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7310..7312),aa:His,seq:gtg)
     gene            complement(7348..7421)
                     /locus_tag="PTC28_001939"
     tRNA            complement(7348..7421)
                     /locus_tag="PTC28_001939"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7387..7389),aa:Trp,seq:cca)
     gene            complement(7429..7512)
                     /locus_tag="PTC28_001940"
     tRNA            complement(7429..7512)
                     /locus_tag="PTC28_001940"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7476..7478),aa:Tyr,seq:gta)
     gene            complement(7519..7594)
                     /locus_tag="PTC28_001941"
     tRNA            complement(7519..7594)
                     /locus_tag="PTC28_001941"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7559..7561),aa:Thr,seq:tgt)
     gene            complement(7603..7675)
                     /locus_tag="PTC28_001942"
     tRNA            complement(7603..7675)
                     /locus_tag="PTC28_001942"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7640..7642),aa:Phe,seq:gaa)
     gene            complement(7686..7762)
                     /locus_tag="PTC28_001943"
     tRNA            complement(7686..7762)
                     /locus_tag="PTC28_001943"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7726..7728),aa:Asp,seq:gtc)
     gene            complement(7777..7850)
                     /locus_tag="PTC28_001944"
     tRNA            complement(7777..7850)
                     /locus_tag="PTC28_001944"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7814..7816),aa:Met,seq:cat)
     gene            complement(7868..7960)
                     /locus_tag="PTC28_001945"
     tRNA            complement(7868..7960)
                     /locus_tag="PTC28_001945"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7922..7924),aa:Ser,seq:tga)
     gene            complement(7969..8042)
                     /locus_tag="PTC28_001946"
     tRNA            complement(7969..8042)
                     /locus_tag="PTC28_001946"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8006..8008),aa:Ile,seq:cat)
     gene            complement(8068..8141)
                     /locus_tag="PTC28_001947"
     tRNA            complement(8068..8141)
                     /locus_tag="PTC28_001947"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8105..8107),aa:Met,seq:cat)
     gene            complement(8172..8247)
                     /locus_tag="PTC28_001948"
     tRNA            complement(8172..8247)
                     /locus_tag="PTC28_001948"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8212..8214),aa:Ala,seq:tgc)
     gene            complement(8270..8343)
                     /locus_tag="PTC28_001949"
     tRNA            complement(8270..8343)
                     /locus_tag="PTC28_001949"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8307..8309),aa:Pro,seq:tgg)
     gene            complement(8357..8430)
                     /locus_tag="PTC28_001950"
     tRNA            complement(8357..8430)
                     /locus_tag="PTC28_001950"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8394..8396),aa:Arg,seq:acg)
     gene            complement(8448..8536)
                     /locus_tag="PTC28_001951"
     tRNA            complement(8448..8536)
                     /locus_tag="PTC28_001951"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8500..8502),aa:Leu,seq:taa)
     gene            complement(8543..8617)
                     /locus_tag="PTC28_001952"
     tRNA            complement(8543..8617)
                     /locus_tag="PTC28_001952"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8583..8585),aa:Gly,seq:gcc)
     gene            complement(8621..8702)
                     /locus_tag="PTC28_001953"
     tRNA            complement(8621..8702)
                     /locus_tag="PTC28_001953"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8666..8668),aa:Leu,seq:tag)
     gene            complement(8707..8779)
                     /locus_tag="PTC28_001954"
     tRNA            complement(8707..8779)
                     /locus_tag="PTC28_001954"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8744..8746),aa:Lys,seq:ttt)
     gene            complement(8784..8859)
                     /locus_tag="PTC28_001955"
     tRNA            complement(8784..8859)
                     /locus_tag="PTC28_001955"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8824..8826),aa:Thr,seq:tgt)
     gene            complement(8883..8958)
                     /locus_tag="PTC28_001956"
     tRNA            complement(8883..8958)
                     /locus_tag="PTC28_001956"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8923..8925),aa:Val,seq:tac)
     gene            complement(8971..9085)
                     /gene="rrf"
                     /locus_tag="PTC28_001957"
     rRNA            complement(8971..9085)
                     /gene="rrf"
                     /locus_tag="PTC28_001957"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT         2544 a         2186 c         1498 g         2937 t
ORIGIN      
        1 aatattaaat atatcaacac tctatttgta aacatatctg ttattgatat tgagaaaatt
       61 aataatatag taaaatatat tatagtgaaa taatactgtt caattgtatt tttcatttct
      121 aatcacctca tggtctttat caacaaagtg tgctaccagc agtgtataac gctgccattc
      181 cgaaacctac gccccaacca actggaccac taacacctag agcggtcatt gctgctgtag
      241 tcgccccagt gtgtagtaaa cctgatacac tgattgcagt tgagcattta gatctgaatt
      301 tatcattact cacctgattt ttcatatgtt tttcaacttc tgaattataa gtttttagtt
      361 gtttttgtgc ttttttacca ttttcgcctt ttattgtggc attatagttt tgcacataag
      421 tctgaacgtc tttaacactc actcctaaat ttgatgaatt caaatctttt tttaatttac
      481 cctcatctga tataactaaa tcgccatctt tacttttagc taaattagag taaataatat
      541 ttgccatttc ttcatttacc tgctcgtctc ctgcttgcgc ttgtgtagtc ttgttttcac
      601 ttgatgcgtt tacgacgctg tctcctacac ccaacggact tagaactaaa cctccagata
      661 aaactgctac acctaaaaac ttcagattct tacttttcat aaataattcc tcctaagtat
      721 taaatgtttg cgttttcaat gtaacatata tgtaatataa ttgtaagcac tttagaatac
      781 aaaaaaatta atttacacta tttagaaact gctatcgtat gcttatgaac ccaactttta
      841 tttgccggcg tatacatacg acaccagata tttccttgct catcttgaat ttcttcgaag
      901 atataaaccg tttctccctt ccctaaaatt cccttctcat gtccgaatga atagttattg
      961 aagctatctc cggaacgctc acgtaatgat gcattgtatt taatcttacc gctatagtgt
     1021 gctttttcag accacggttt aattctttta gccgttttag gttgtttctt gactggaatc
     1081 ttctgcgtag cttttgacgt aggtttaggt gctggtttcg attctttagg tttagactct
     1141 ttcgctacac catcgagata tttcagtaca tacttatcta ctaccgacat atctttcgaa
     1201 tatccacacg cttccaatac gctctttgga acaatcttat cagcttgtat ttgataatga
     1261 cccggcattt ggttgcgtgg attaattccg tattctttgc agataaacac tgcaatttta
     1321 cacgcattat cgaacgactt tcttgaacgc tctttatcgc taaagtaaca cgcctctaca
     1381 cctactgcaa tatcgttagt gtcatcgcca taccataagt tatccgtaga agcatagtac
     1441 aacacatgtc atgctttttc gtctaacggt acgcaattga tacactcttt gtcatctaca
     1501 aacacatgcg ctgacacagt cgtagcccac ggttgattat acgtattgtt gtagtaattt
     1561 acattttgtt gcgctgtact atttctatta cctgtatcgt gaaaaactaa gaacttcgga
     1621 tgaccactat ctaatcgttg tcccgtacgt ctagttccga ttttcaaaaa ctctgtatac
     1681 gttggtactc cgttccaatc tccaatatat ttcttcacca ttttaccatt cccctttgtt
     1741 gtttttacgt atgaatcttt ttcgatatct aggtcgtcaa taaacggaag cctaattacg
     1801 ccccagaatt ctaaatcatc gtagttatga attacttctt cgactggact accgttccca
     1861 tgtgtcgccc aattctgatc tagcgactta aacaaatcta aattaccttc gactccaaga
     1921 gccacatgtc cgcacttacc tttgacccaa acgcatatat ctaacggctg tactacgaag
     1981 gtttctttat tacgaataaa cttccttcct ttgggcgctt tccttctatt cttttgactg
     2041 ataatatcct tcgcatgtcc ttcgaaatgc caatcgaaat actttttacc gaatataatt
     2101 atccagtcag cgcattgtcc cggccatatt ccgtcgccat catgcattat gcctctttgt
     2161 cgtttagccc accgcaatgc ttcactagct tttgtttcgt aacctatcgg cataaatcgt
     2221 tctccttact acagattttc tgcaaaataa aaaaccggca ttacaccgac tcaaaatggt
     2281 ttatatacgg ttgattctca ccaatcgttt tcctgcgtat attgctacaa tatctgtttc
     2341 gccgtagaac acttctttcg taatcaataa attcatatcg tcttgcactt taccggattt
     2401 cttcgtaccg ataactaata aatcattgag cggatatttt tcagtttcca ctcgttcgtt
     2461 tcgtgttata cctgtaggta cttcgtcctt ttattctact tctctacggt taactattgt
     2521 gccatttaat cctcgcctct taacgtatga ttgcgtagga agtagattgc tgtcgtattc
     2581 tgcggttgca ctgcgtacta atgaaggtaa aacatctaca acgacgcgcc attcagtttt
     2641 actatcgtct ctaaaaaata ctaccttcgc agttactacg cctgataagt tgtattgatc
     2701 attcgataac aacacagtaa ttgacgtatc acttacaacc atactttcga tatcgtagct
     2761 gacatcgtta attgttagcg atgagtacgt atgattaccc aatactctac ctaagctacg
     2821 gttgattatg atatcaaaac gactaggttg tacagttatc ttacgattac ctaaaattac
     2881 tttcgccata tatcgtcacc tcaatacgta attaggtaca acgtagtgct gctaatagaa
     2941 gacaacgcat catactcgtc atttgtacct gcccataaat taataatatc gcctttttgt
     3001 ccgtcacgac ccgccttacc ttgaatacct tgttcgccac gttcgccttt agcatcatct
     3061 tcgcctttta gcaatttcaa ccattcttcg atagttccag tgaacccact gttcttcgca
     3121 agctcatacg cacttagacc atttgttccg ttcacaccat ctctaccgtc ttgccctttc
     3181 ggaatagtta gcgtagtctc atccgagaac ttaaccaata tatttccgtc ttctacacgt
     3241 tgacttaaga tagttatcga ctgacctgcc tcgcctttcg cgcttgcttc tccaccttct
     3301 ccacgctgtc ctctcggtat agttacgtac gaattatcgc taaatttaat gattatatta
     3361 ccttctttat ctaagtccgc accaataact tctaatgaac gtccatcacg cccacgtaac
     3421 gcttcgagca aacccttctc tatttcgaac ttgattagct catcatatac agatttattc
     3481 actacttatt cgaatgtacg ccctaaaatc gatttagtaa cctcaatctt ttcgctttca
     3541 tccgacggga atacatactt atcatctacg actatttcta acatataagt accgcgagga
     3601 agtatatcgt ctatttttac gattactacg tccttgtcat cgatattttc taccgttgtt
     3661 tcttttttat aaataatttt cgaactttta tacaaataaa ctacctctac ttttcctacg
     3721 atagatagtt cgtcattttc atcaatcaat tgatatctca tcacagattt atcgccttgc
     3781 ttgatcctgt ttccgtctcc taaattcaag acgtttaata cgattgtctg caaatagtcc
     3841 acctcttcct cgataattca atgcaaaata cgaataaaat acaaataaaa aagacgccca
     3901 tttgagcgac taatttatct tatgctttcg gtttcttata gcttaatgct cgcacactat
     3961 ctccgaatcc tggtgtcgta ttatctgcgt atacattgta tgctgatacg ccaattgttg
     4021 caaatacgta tggattactt acagcgtctg taactaattt aaacaacgtt ccccatgacg
     4081 caatttgctt cgcagtaaca ccgtagtaca ccaaaattgg cataaaaata gacgcaacca
     4141 tttgcgccca aaagtgtgga tttctcgttc taacaccgaa gtttgtttta aatttattca
     4201 tttgtatttt ccctttgttc gttttatttt cacttctgtt cgtctaattc tgctacaatt
     4261 tgattcttta ttttcgcaac ttttctacgt tcatcttcat ctataatacg catcaaatta
     4321 cggaatatta aagccaacac aagcaccatt atccctaacc caaattcgga tagttgagca
     4381 gaaagctact cgtcactata ccgaaataaa agaatccgat agtattaacc gccaatttta
     4441 gtatcggtct cttcgtaaaa aatccgatta gataaaatat tgctacgctt aaagatatat
     4501 gcaaaagcga tgattgacta ccgagaaggt taacgtaacc tttgtaaaca tcgttgtcaa
     4561 tcttactaaa taacgatggc tctaacgcaa gtgtaaatgt tacatacaat gcgtaaaaga
     4621 atatgacgat ttctatcgcc gccggtttcc taatcattct taacctccta cttcattcca
     4681 agacggatta aaatgtaacc acttataccg ccaacaatcg tagtaataaa cgtcttctta
     4741 atcaatttcc aagtttcaga atctgattct atctgcgcta ttactttcga caattgttca
     4801 tctgacaact tcgtattatc ttccaacttc gcaatgcgtt gatcatgcga atctatttgt
     4861 gtttcgatat aagcgatgat ggcacgtaac gctacgtctt ctactttttc tatcaatcca
     4921 cgtatcacgt ttctctaccg ccttttattt tcttgttgtt atttgcgcat tttcactgct
     4981 ttataactac tcttctaccg ctttctttca acatctactt gcataacttt aaacgttatt
     5041 gagctttctc cgtcttcatc ttcgtgaagt atttctaacg ccgattctac cttcttcgct
     5101 gatgccacac tcttaatcga tttagcaaat gctagttcct ccgtagcgta atacgtccca
     5161 gaataagagt cacgcatcaa cgctttctca ttactttcac tatccacttg aactagaata
     5221 tagcttgtcg acttaccttg aatctctttt gccataaatt accacccctt atatttattc
     5281 aacgcggaat acttcgcaca atctatcgta agtaacagcg tcctcttctt tcaattgaat
     5341 atctaactca tctaaaactt taaatagagt ttcgaacact ttcgggtaat cttcgagatt
     5401 gataataact tcttcgttat ctaattccgc acgctcatcg atatattttt ctaagttacc
     5461 attttcgaat tcatattgat tgtctacaat cttaggctgc cctgcctcgt ctttaactgc
     5521 gtacatactt aacaattcat cgttaccttc tttatattcc tcctgctttt cgtctagcaa
     5581 tcgcataaat ttcgttcttg acctactttg tttcgctttt agttctaact tatacataaa
     5641 cgtactaact ttatttattt cgacattttt taatgttaac ttcactaatc ttcctcctta
     5701 ttcatattaa actttccaag tactatcttg aagtatattt cctacatcat agacagcgtt
     5761 gttatataac agctccacac tatgatttga tatcactata ccgtaacgac cattccaact
     5821 agtaagacct gcattcccac ttctatatgt cacgagttta aacttatcat tcaaaccttg
     5881 cgtccaaact gaatagaact gcgcattagc ttgccctaat tcataactat attcgacaga
     5941 gttattaccg aaaaaggctc gcattttacc acttttacga taattttcaa gcgtccaacc
     6001 acctgtatta ggctcacctc catgactatc gaaataaact ttatctgaat atattcctgt
     6061 agaactatac ggatttgcat aagagtgcgc tactattccc gcaaaatctc cacgtttagg
     6121 atcgactgaa ccacttctat tagctcccaa cactactgcc ggacttgtag ttccttctgt
     6181 attcgtaaac attaaaaaac ctaccccatc tttattttta tatttaagta tattcgagga
     6241 tgtgtggaag tcgatatgtg aactcccgta aaaatcgagt gagttaccgt ttaaattcta
     6301 tttaacagca ccattagttg attacatcta acgttaaatc ttcatcgtta tctaccctcc
     6361 atttacgata gatagaataa cgctcattat aatatttaat cgtatgtttc gataaatctt
     6421 tagtcacctg atgtcgcata aacttttcga aataataatc gagtgaatca gtttgacctc
     6481 cgccaaaatc attcgccact tccttacgta actctgcggc aaacttggcc gaaatggaac
     6541 ctcgtctaat ttccgacata aaaaatacgc ctacttttct tagagacgtt ttcgttgttc
     6601 ttcgaaatat agtaccttta cgagaatccc actacgagaa tcccgcgaaa ggctttcgaa
     6661 atatgtgcga ttgtaatcac aacacagtcg aaattttagg caataaaaaa tccgtctaaa
     6721 tccacatcct acgtgtgatt caacggtttg ccttcgtaaa aatttatgaa tatgtatgcg
     6781 tataatatac gaaaataaat ttcatgagat atcgtgaaac ctaccattta cttttgagtc
     6841 ccgcgcgtct gccaattccg ccaaaccggc ataatacaaa aaaatccaat atgtcattgg
     6901 aaaaatggag cggaagatag gacttgcacc tatacctctt tccgggaagg aaagtgttct
     6961 agaattgaac tactcccgca tcatgagtga ttaacttgaa tttaaaatga tttggagcgg
     7021 aagataggac ttacacctat acctctttcc gggaaggaaa gtgttctaaa aattgaacta
     7081 ctcccgcatg tttcatatca atggaggcgg caaccggatt tgaaccggtg aatagaggtt
     7141 ttgcagacct cggccttacc acttggctat gccgccaaaa gtaactgggc tagctggatt
     7201 cgaaccagcg agtgacggag tcaaagtccg ttgccttacc gcttggctat agcccattaa
     7261 ttttaaataa agggcggttg atgggaatcg aacccacgaa tgtcggaacc acaatccgat
     7321 gcgttaacca cttcgccaca accgccatgg caggggcagt aggaatcgaa cccacatcaa
     7381 aggttttgga gacctctatt ctaccgttga actatgcccc tattgatatg gtggaggggg
     7441 gcagattcga actgccgaac ccgaaggagc ggatttacag tccgccgcgt ttagccactt
     7501 cgctacccct ccaagacatg gtgccggcca gaggacttga acccccaacc tactgattac
     7561 aagtcagttg ctctaccaat tgagctaggc cggcaaaaaa agtggttcag gacggaatcg
     7621 aaccgccgac acaaggattt tcagtccttt gctctaccga ctgagctact gaaccatttt
     7681 aataatggcg gtcccgacgg gaatcgaacc cgcgatctcc tgcgtgacag gcaggcgtgt
     7741 taaaccgctc cactacggga ccacttataa ataatattgc gggaggcgga tttgaaccac
     7801 cgaccttcgg gttatgagcc cgacgagcta ccgaactgct ccatcccgcg gtaataaaaa
     7861 ataataatgg cggaggaaga gggattcgaa cccccgcgag ccgttaagcc cctgtcggtt
     7921 ttcaagaccg atcccttcag ccagacttgg gtattcctcc gaattatatg gaccttgcag
     7981 gactcgaacc tgcgaccgaa cggttatgag ccgttagctc taaccaactg agctaaaggt
     8041 cctaataata ttttcaacta aaattagtgg cggcggaggg gatcgaaccc ccgacctcac
     8101 gggtatgaac cgtacgctct agccagctga gctacgccgc cttatgtagt tgtattagta
     8161 ttaaatttaa atggtggaga ctagcgggat cgaaccgctg acctcctgcg tgcaaagcag
     8221 gcgctctccc agctgagcta agcccccata taaataattt taaaagctat cgggaagaca
     8281 ggatttgaac ctgcgacccc ttggtcccaa accaagtgct ctaccaagct gagctacttc
     8341 ccgtaaggta atgtagcgcg cccgatagga gtcgaaccca taaccttttg atccgtagtc
     8401 aaacgctcta tccaattgag ctacgggcgc atatgaaaca gaaacaatgg tgccgaggac
     8461 cggaatcgaa ccggtacggt gatctctcac cgcaggattt taagtcctgt gcgtctgcca
     8521 gttccgccac cccggcaaat attggagcag aagacgggat tcgaacccgc gaccccaacc
     8581 ttggcaaggt tgtattctac cgctgaacta cttctgcata tgcgggtgaa gggagtcgaa
     8641 cccccacgcc gtaaggcgct agatcctaag tctagtgcgt ctgccaattc cgccacaccc
     8701 gcaaagtgag ccatagagga ttcgaacctc tgaccctctg attaaaagtc agatgctcta
     8761 ccaactgagc taatggctca tcatggtgcc ggccagagga cttgaacccc caacctactg
     8821 attacaagtc agttgctcta ccaattgagc taggccggct actcatattt attttttaaa
     8881 aatggtggag aatgacggga tcgaaccgcc gaccctctgc ttgtaaggca gatgctctcc
     8941 cagctgagct aattctccaa ttatgtaata acctggcacc gtcctactct cgcggaacgt
     9001 aagtccgact accatcggcg ctaaagagct taacttctgt gttcggcatg ggaacaggtg
     9061 tgacctcttt gccattggca ccagattaag tttttgaatg tcatacattc aaaactagat
     9121 agtaagtata tttatcacaa gcattacctt atgaacaatt atatt
//
LOCUS       DANHPA010000096         9109 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.096, whole genome shotgun sequence.
ACCESSION   DANHPA010000096 DANHPA010000000
VERSION     DANHPA010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 9109)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9109)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9109
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.096"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..1239
                     /locus_tag="PTC28_001958"
     CDS             <1..1239
                     /locus_tag="PTC28_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717206.1"
                     /translation="PLIQQFKSGKQPSTNIDNLWDFIMAFFNEIIRVMSRYIGDIPLA
                     SGIVILLFGILMILIGRTLTNTTRFDYDISILFLLVGIIFFVLTLIFMSQVYGWIAFI
                     FIIPFLVHIGYITYKDELNPLHRKEHYLWIIFSYGLCYILTQIALYARIEAKDVASID
                     VLSINTFFVVLWLIGQMAVWNFLFLRRALPVSEEEITGEANAYSRSKKYQFTNTSKNH
                     FKDFQDRTAEFTHGISRRTRRSIDLEKLRQKRETLGKKWFSWAKLEEDDIPTFLKIRP
                     KWLNRNYVMIACGVILLFFILLEFNNRNALFMSGDWQLSQTQYVYEWVSLLLLLIVAI
                     VFIFTTVVRMLRGKYYYLQLFMISILFFKLLTEYIVILFHGLLLSIFITPILVLMLVP
                     AIVAFVLQLRQPVDTQVKKH"
     gene            1375..2544
                     /locus_tag="PTC28_001959"
     CDS             1375..2544
                     /locus_tag="PTC28_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002495586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HDK5717207.1"
                     /translation="MKTAILNKGKEEKYFNQYPLVEEEDLFQHDQLEEGDVFHLLTST
                     NVYIATCYVGHQHKGLGWILTYQKDKVIDQAFFEQLFEQALEVRQYYYQIEGTNAFRL
                     FNGEGDGVGGLTIDNYDGHLLIQWYSEGIYRFRPQIVSAIKKIYNYTSIYEKTRFKHQ
                     SIEGGFVTGTAPEFPIVVEENFTFYNVHLDDGPMTGIFLDQKEVRKKIRDYYAKGRQL
                     LNLFSYTGAFSVIAATADSQTTSVDLANRSRQLTEENFGLNGIDPKSQHIYVMDTFDY
                     YKYALRHGLTYDTIVIDPPSFARNKKKTFSVTKDYDKLIEGALSILNPGGSLVLSTNH
                     SAYSLKGFKNMVKQTIENQGFTYEMNEVMGLPKDFKTHPHYKPSKYLKVIFITIK"
     gene            2605..3135
                     /locus_tag="PTC28_001960"
     CDS             2605..3135
                     /locus_tag="PTC28_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF697 domain-containing protein"
                     /protein_id="HDK5717208.1"
                     /translation="MNFKQKISETLGNKVLDIETINRKDALPASVQEIRARRERAEVL
                     VRKKALLSSGATVVPIPGFDFGMDMKLMRDVIEDVNKIYGLDHQQVNQMSDDMKNRIL
                     MAAGIQGSQLIGKKVSSGLLKVFIRDVAKRTAAKQTRWFPIVGQAVSASISYYFMVKV
                     GKDHIQKCENVVKSLL"
     gene            3299..3565
                     /locus_tag="PTC28_001961"
     CDS             3299..3565
                     /locus_tag="PTC28_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein HPr"
                     /protein_id="HDK5717209.1"
                     /translation="MEQQSYVIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNL
                     KSIMGVMSLGVGKDAEITIYADGSDEKSAIDAITEVLSKEGLTK"
     gene            3565..5286
                     /gene="ptsP"
                     /locus_tag="PTC28_001962"
     CDS             3565..5286
                     /gene="ptsP"
                     /locus_tag="PTC28_001962"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HDK5717210.1"
                     /translation="MSNIIKGIAASDGVAIAKAYLLVEPDLSFSNEKTDQPEAEVQKF
                     NEALNNSKIELTKIRNHAEEQLGADKAAIFDAHLLVLDDPELIQPIEEKIKNESASAP
                     QALTEVTQNFITIFESMDNEYMKERAADIRDVAKRVLAHILGVELPNPSIIDESVIIV
                     AHDLTPSDTAQLNKQYVQGFVTNIGGRTSHSAIMSRSLEIPAVVGTKSISESVQQGDM
                     VIVDGLTGDVIVNPSDDEIKAYQHKRESFFADREALKQLRDEPSKTLDGHEVELAANI
                     GTPNDLEGVHNNGAEGIGLYRTEFLYMGRDNMPTEDEQFEAYKKVLESMEGKRVVVRT
                     LDIGGDKELPYLNLPEEMNPFLGYRAIRLCLDQPEIFRPQLRALLRASAYGKLNIMFP
                     MVATIQEFRDAKALLLEEKENLKQEGVEVSDDIELGIMVEIPATAALADVFAKEVDFF
                     SIGTNDLIQYTMAADRMSERVSYLYQPYNPSILRLIKQVIDASHQEGKWTGMCGEMAG
                     DETAIPLLIGLGLDEFSMSATSILKARRQIKDLSRTEMVQLADRALNCATVDEVVDLV
                     KAKTTKA"
     gene            complement(5463..5696)
                     /locus_tag="PTC28_001963"
     CDS             complement(5463..5696)
                     /locus_tag="PTC28_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrdH-redoxin"
                     /protein_id="HDK5717211.1"
                     /translation="MSEVIIYTQNECPPCSFVKQYLEQHNVPFEERNIVNSTYRNEMI
                     ERDAFSTPFILIDGEPMYQVDLDLMNKKLGIQS"
     gene            5899..7242
                     /locus_tag="PTC28_001964"
     CDS             5899..7242
                     /locus_tag="PTC28_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HDK5717212.1"
                     /translation="MDAVDISRFLTGMTLAVHIIFATIGVGMPLFFAMAEFIGIKKKS
                     AQYIALAQRWAKGYTITVAVGVVTGTIIGLQLSLLWPTFMRIGGHVIALPLFMETFAF
                     FFEAIFLSIYLYTWNRFKNQWIHFFISIPVIIGGSFSAFFITSVNSFMNTPAGMTIEN
                     GRMVNVDPIAAMFNASFFVRSFHVIATALMTMAFILASIAAFKLLKNKIEKDRRYHQA
                     ALKMTMIAGLIFSMLSMLAGDLSAKFLHQEQPEKLAAYEWHFNTESQADLVLFGVLDE
                     STQEVKGALHIPGALSFLSDSSFDTEVKGLNEFPKDELPPLIVHYFFDLMVFFGIFCF
                     VISFAYVMALWIKRFNPHHKLLLYATLLGGPAAMLAIEFGWFLTELGRQPWIVRGFLK
                     VQDAATDASGLVFVTILFAILYFVLLFSATYVLVRMFKNKPAYQHIESLSQRGDA"
     gene            7242..8261
                     /locus_tag="PTC28_001965"
     CDS             7242..8261
                     /locus_tag="PTC28_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002442138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HDK5717213.1"
                     /translation="MVYEVIGITVLWIFLFGYIIVASIDFGAGFFSLHAKLFGQSHEI
                     NDLIQRYLNPVWEVTNVFFVFFFVGIVGFFPDTAYYYGTVLLIPGSIALILLSIRGAF
                     YAFENYGQDSKLSWLMLYAVSGLLIPASLSTALTISEGGYIIESSSGNVDLNWTELLL
                     SPFGWAVVLLAIVSVLYISSGFLTFYAHRAKDTSAYQLMRKWFLMWGAPMIMMSLFVF
                     LSLRIQNEAHFMSAVFDYGWLFIISFIAFAIAGVLTLLKKAHGIAFIFVIIQMGTAFF
                     GYGLSKLPYILYPYVHIDDAVTNDSMALVLTIAFIGGLLLLLPSLFFILKLFVFDKDY
                     VRGKK"
     gene            8410..9069
                     /locus_tag="PTC28_001966"
     CDS             8410..9069
                     /locus_tag="PTC28_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003222311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HDK5717214.1"
                     /translation="MDKEYVVIGLGRFGGSIVRELNALDMDVMAIDKDENRVDEYSDI
                     ATHAVVADTTDEAVMKSLGIRNFDHVIVAIGENIQASTLTTLILKELGVKKVTAKAQN
                     DYHAKILNKIGADTVVHPERDMGRRIAHNVASATVLDYLELSDEHSIVEIKASETMAG
                     QTLIDLDIRAKFGINIIAIKRGKEIIVAPDPDMGLEFDDILIMIGHDNDLTRFEKKMA
                     H"
BASE COUNT         2877 a         1479 c         1909 g         2844 t
ORIGIN      
        1 ccactcattc aacagtttaa gtcaggcaaa caaccgagca caaacatcga caatttgtgg
       61 gattttatta tggcattctt taatgaaatc attcgagtca tgagtcgata tattggtgac
      121 attccacttg cgagcggcat tgttatttta ttgtttggaa ttttaatgat tttaattggt
      181 cggacattaa cgaatacaac acgatttgat tatgacattt caatattatt tttactcgtc
      241 ggcattattt tcttcgtatt aacattaatt ttcatgtctc aagtttatgg ttggattgcg
      301 tttattttta ttattccatt tcttgtacat attggttata tcacatacaa agacgaacta
      361 aatccattgc accgtaaaga acattattta tggattatat tcagttatgg gctttgttac
      421 atccttacac aaatagcgct ctatgcccgt attgaagcga aagatgttgc atcgattgac
      481 gttctgagta ttaatacatt tttcgtagtt ttatggttga taggacaaat ggcagtatgg
      541 aattttctct ttttacgtcg tgcattacca gtgtctgaag aagaaatcac tggtgaagcg
      601 aatgcgtatt caagaagtaa aaagtatcaa tttacgaata cttctaaaaa ccatttcaaa
      661 gactttcaag atcgtacggc tgaattcaca catggtattt cacgtcgcac acgccgtagt
      721 attgatttag agaagttacg tcaaaagcga gaaacactag gaaaaaaatg gttttcatgg
      781 gctaaactag aggaagatga cattccgacg tttcttaaaa taagacctaa atggttgaac
      841 cgcaattatg tcatgattgc ttgtggcgtg attctgttat tctttatatt actagagttc
      901 aataaccgta atgcgctatt tatgtcaggg gactggcagt tatctcaaac gcaatacgtt
      961 tatgaatggg tgagcttgct gttattactc atcgtggcga ttgtttttat ttttacaact
     1021 gtagtgagaa tgttaagagg taagtattat tatttacaac ttttcatgat cagtatttta
     1081 ttcttcaaat tgttaacgga atacattgtc attttgttcc acggactatt attatctatt
     1141 ttcattacac cgattcttgt attaatgtta gtaccagcaa ttgtcgcgtt cgtcttacaa
     1201 ttgagacaac ccgtggatac acaagttaaa aaacattaat aatgcttgac ttgatgaggg
     1261 ctagggagac catttcctag tcctttttat aatggcgtgt ttgggtgaaa gatatcattg
     1321 tgaaatcatc cgtgttaaaa tcagaataat gataagaaaa gaaaggctga taaaatgaag
     1381 acagctattt taaataaagg taaggaagaa aaatatttca atcagtaccc acttgtggag
     1441 gaagaggatt tatttcagca tgatcaatta gaagaagggg atgtctttca tctcttgact
     1501 tcaacaaacg tctatatcgc gacttgttat gtagggcatc agcataaagg attaggttgg
     1561 atattaacgt atcaaaaaga taaagtgatt gatcaagcat tttttgagca actgttcgaa
     1621 caagcgctcg aagtccgtca gtattactat caaattgaag gcaccaatgc atttcgtcta
     1681 tttaatggtg aaggcgatgg cgtgggtggt ctcacgattg acaactatga tggccactta
     1741 ttaattcaat ggtactcaga agggatttat cgttttcgtc cacaaattgt gagcgcgatt
     1801 aaaaagattt ataattatac gtctatatat gaaaaaacgc gttttaaaca tcaatctatt
     1861 gaaggcggtt ttgtaacggg gacagcaccg gagtttccga ttgtcgttga agaaaatttc
     1921 acgttttaca atgtacatct tgatgacggt ccgatgacgg ggatattctt agaccaaaaa
     1981 gaagtgcgta aaaagattag agactattat gctaaaggac gccaattact caatttattc
     2041 agttatacag gggcattttc ggttatcgct gcaacagctg acagtcaaac aacgagcgtg
     2101 gacttggcta atcgctcacg tcagttgact gaagagaact ttggtttgaa tggtattgat
     2161 cctaaatcac aacatattta cgtgatggat acgttcgatt actacaaata cgcactacgc
     2221 catggtttga cttacgatac gattgtcatc gatccaccga gttttgcgcg caataaaaag
     2281 aaaacatttt ctgtgacaaa agactatgac aagttaattg aaggggcact tagtattttg
     2341 aacccaggtg gcagtctcgt attgagcacg aatcatagtg cttattcgct aaagggattt
     2401 aaaaatatgg tcaaacaaac gattgaaaat caagggttca cgtatgaaat gaatgaagtc
     2461 atgggcttgc caaaagattt taaaacacat ccacactata aaccgtcgaa gtatctgaaa
     2521 gttattttta ttacaatcaa gtagtaaaaa ttgttaaaag gggtatagat gtgaagaatt
     2581 ttcataatga ggtgagtatg gaagatgaat tttaaacaaa aaatttctga aacattaggt
     2641 aataaagtac tagatattga aacgattaat cgaaaagacg cgctaccggc atcagtacaa
     2701 gagatacgtg caagacgcga acgtgcagaa gtgcttgtga gaaaaaaggc gttgttatct
     2761 tcaggtgcaa ccgttgtgcc cataccggga tttgattttg ggatggacat gaaattgatg
     2821 cgcgatgtca ttgaagatgt gaataaaatt tatggcttag atcatcaaca agtgaaccaa
     2881 atgagtgatg acatgaaaaa tcgtatctta atggcagcgg gtattcaagg cagtcaatta
     2941 attggtaaaa aagtgtcgag cggtttgttg aaagttttta tacgtgatgt agctaagcga
     3001 actgctgcga aacaaacacg ctggttccca attgtcggac aagctgtgtc agcatctatt
     3061 agttattatt ttatggttaa agtcggcaaa gaccatattc aaaaatgcga aaatgtagta
     3121 aaatcattat tgtagcttgt aaaaaaaatc acaaagcatt atgaatgccg ttaaaaaaga
     3181 gatggcgggg catttacgaa ttgaatttaa ctatagaatt tggtaatgta atgctatgta
     3241 gcgaagttaa atataattta tgctagtaaa tctagaagta gaaggagtaa gatgacagat
     3301 ggaacaacaa tcatatgtaa ttattgacga aacaggtatt cacgcacgtc ctgcaacaat
     3361 gcttgttcaa acagcttcaa aattcgattc agatattcaa ttagagtata acggtaaaaa
     3421 agttaactta aagtctatca tgggtgttat gagcttaggt gtgggtaaag acgcagaaat
     3481 tacaatttat gctgatggta gcgatgaaaa aagcgcaatc gacgcaatca ctgaagtatt
     3541 atctaaagaa ggattaacaa aataatgtca aatattatta agggaattgc agcttctgat
     3601 ggtgttgcta ttgccaaggc gtatctgctc gtagaacccg atttaagttt tagtaacgaa
     3661 aagacggacc aaccggaagc ggaagtccaa aaatttaatg aggcgctgaa taactctaaa
     3721 attgaattaa cgaaaattcg taatcatgca gaggaacaat taggtgcgga taaagcggct
     3781 atctttgacg cacatttact cgttttagat gatcctgagt taattcaacc aattgaagag
     3841 aaaattaaaa atgaaagcgc aagtgcacca caagcattaa ctgaagtgac acaaaacttc
     3901 attactattt tcgaatcaat ggataacgaa tatatgaagg aacgtgctgc ggatatccgc
     3961 gacgtagcta aacgtgtttt agcgcacatt ttaggggtgg aattaccaaa tccgagtatc
     4021 attgatgaaa gcgtcatcat tgtggctcac gacttgacgc catcagatac tgcacagtta
     4081 aacaaacaat atgttcaagg attcgttacc aacattggtg gtcgtacttc acattcagca
     4141 attatgagcc gttcattaga gattcctgct gttgtaggta caaaatcaat ttctgaatct
     4201 gtacaacaag gggacatggt tatcgtcgac ggtttaacag gggatgtgat tgttaatcct
     4261 tcagacgatg aaatcaaagc gtatcaacac aagcgtgaat cgttctttgc agatcgtgaa
     4321 gcgttgaaac aattacgtga tgaaccatca aaaacattgg atggacacga agtagaactt
     4381 gcagcgaaca ttggtacacc gaatgattta gaaggtgtgc acaacaatgg cgcagaaggt
     4441 atcggtttat accgtactga gttcctttac atgggtcgcg acaacatgcc gactgaagat
     4501 gagcaatttg aagcatacaa aaaagtgctc gaatcaatgg aaggtaaacg cgttgtcgta
     4561 cgtacattag atatcggtgg cgacaaagag ctaccatatt taaacttacc tgaagaaatg
     4621 aatccattct taggataccg tgcgattcgt ttatgtttag atcaaccaga aattttccgt
     4681 ccacaattac gtgcactatt aagagcttca gcatacggaa aattgaatat tatgttccca
     4741 atggtggcaa caattcaaga gttccgtgat gcgaaagcgt tacttcttga agaaaaggaa
     4801 aacttgaaac aagaaggcgt agaagtgagc gacgatatcg aattaggtat catggttgaa
     4861 atcccagcaa cagccgcact tgcagatgta tttgcgaaag aagtggattt cttcagtatc
     4921 ggtacaaacg atttaattca atatacaatg gctgcagacc gtatgtcaga acgtgtttct
     4981 tatctttacc aaccatataa cccttcaatc ttacgtttaa ttaaacaagt gattgacgct
     5041 tctcatcaag agggcaaatg gacaggtatg tgtggtgaaa tggctggcga tgaaacagca
     5101 attccattat taattggttt aggattagat gagttctcaa tgagtgcaac ttctatctta
     5161 aaagcgcgtc gtcaaattaa agatttaagc cgaactgaaa tggtgcaatt agcagaccgt
     5221 gcattaaatt gcgcaactgt tgatgaagtt gttgacctag taaaagcgaa aacaacaaaa
     5281 gcttaattga atcaaataaa aagagattga gtcattgcgg ctcagtctct tttttgggtg
     5341 tgtctcatac ttgctataca tattctcaag aaatatgtat aggatgaaag actaaactta
     5401 aaaagactgg gagatgcata ctcccagtct ttagctaaaa cgaaaatatt caaataatgt
     5461 gtttatgatt gaataccgag ctttttgttc attaaatcta aatcgacttg atacatcggc
     5521 tcgccatcaa ttaaaatgaa cggtgttgaa aaagcgtcgc gttcgatcat ttcgtttcga
     5581 tacgttgaat tgacaatgtt tcgttcttca aatgggacat tatgctgttc aagatattgt
     5641 ttgacaaatg aacatggcgg acattcattt tgtgtgtaaa taatcacttc tgacatagag
     5701 acgcctactt tcatatcaat tgttgttaca tcttaatcga cacttcaata aaatgcaact
     5761 gaaacgactg tataaaaatg acaaatttta gtcatgtcat taaattgtca atgtcttaat
     5821 gaacaaaaaa atatatatgt gacctgtata ttgtttataa tgaatagaca ttttcatcat
     5881 agttaaggag gtcgtgaaat ggatgcagtg gatattagcc ggtttttaac aggtatgaca
     5941 cttgcagtcc acattatttt tgcaacgatt ggtgtaggta tgccactttt ctttgcgatg
     6001 gcagaattta tcggcattaa aaagaaaagt gctcaatata tagcattagc gcaacgttgg
     6061 gctaaaggat atacgattac cgtggcagta ggcgtagtaa cagggacaat tataggttta
     6121 cagttatcat tactatggcc gacatttatg cgaataggtg ggcacgtcat tgctttgcca
     6181 ttatttatgg aaacatttgc gtttttcttt gaggcgattt tcttaagtat ttatttatac
     6241 acttggaatc gtttcaaaaa tcaatggata cactttttca ttagtatccc agtgattatc
     6301 ggtggtagtt tttctgcgtt ctttattacg tcggtcaatt cgttcatgaa tacgccggca
     6361 ggtatgacaa tagaaaatgg tcgcatggtt aatgtggatc caattgcagc gatgttcaac
     6421 gcatcatttt ttgttcgatc tttccatgtg attgcgacag cgcttatgac aatggcgttc
     6481 attttagcaa gtattgcagc gtttaagtta ctgaaaaaca aaattgaaaa ggatcgtcgt
     6541 tatcatcaag cagcactgaa gatgacgatg attgcaggat tgattttttc aatgttatcg
     6601 atgttagcag gggacttatc agcgaagttt ttacatcaag aacagcctga gaaacttgca
     6661 gcatatgaat ggcattttaa tacagaatct caagcggatc tcgtgttatt tggcgtgctt
     6721 gatgaatcaa cgcaagaagt gaaaggcgct ctccatattc caggtgcgtt aagcttttta
     6781 tcagattcaa gttttgatac agaagtcaaa ggactcaatg aatttccaaa agatgaatta
     6841 cccccactca ttgtccatta tttctttgat ttaatggtgt tctttggaat tttctgtttc
     6901 gtcatttcat tcgcttatgt catggcattg tggattaaaa gattcaaccc acatcataaa
     6961 ctattactct atgcaacgtt gttaggtggt ccagcagcca tgttagcgat tgagttcggt
     7021 tggttcttaa ctgagcttgg acgccaacca tggattgtga gaggcttctt aaaagtgcaa
     7081 gatgccgcga cagacgcaag tgggctcgtg tttgtgacga ttttatttgc gatactttac
     7141 ttcgtgctgt tattctcagc cacatacgtg cttgtaagaa tgtttaaaaa taaaccggcc
     7201 tatcagcaca ttgaaagttt aagtcaacga ggtgatgcat gatggtttat gaagtgatag
     7261 ggataacagt actctggatt ttcttatttg gttatatcat cgttgcttcg attgatttcg
     7321 gcgcaggatt tttctcatta cacgcaaaat tatttggaca atcgcatgaa attaatgatt
     7381 taattcaacg ttacttgaac ccggtatggg aagttaccaa tgtatttttt gtctttttct
     7441 ttgtaggcat tgttggattt ttcccagata cagcttatta ttatggcaca gttttactta
     7501 ttccaggttc gatcgcactt attttacttt caattcgagg agccttttat gccttcgaaa
     7561 attacggtca agatagtaaa ttgtcttggc ttatgttata tgcggtatca ggattattga
     7621 ttccggcttc attatcaacg gcattaacca tttctgaagg tggttatatc attgagtcgt
     7681 cttctggcaa cgttgatttg aattggacag aattactatt aagtccattc ggttgggcgg
     7741 tcgtcctatt agccattgtg tctgtgctat acatttcatc aggattttta acattttatg
     7801 cgcaccgtgc caaagacaca tccgcatatc aattgatgcg taaatggttt ttaatgtggg
     7861 gtgcaccgat gatcatgatg tcgttgtttg tgtttttatc attaagaata caaaatgaag
     7921 cacactttat gtcagcagtg tttgattatg gctggttatt tatcatcagt ttcatcgctt
     7981 ttgccattgc tggcgtattg acgctcttga aaaaagcaca cggtatcgca tttatttttg
     8041 tcatcattca aatgggcaca gcctttttcg gatatgggtt aagcaagctg ccatacattt
     8101 tatatccata cgtgcacatt gacgatgcgg tgaccaatga tagtatggcg ttagtgttaa
     8161 caatcgcctt tatcggtggt ttactattat tgttaccatc actctttttc atattgaaat
     8221 tgttcgtgtt tgataaagat tacgtccgtg gtaaaaagta agcgggacca gtaaaacggt
     8281 gcatcataaa tcattttgta gtaatatgat aatagtattg aatacatgtg tggcttaaag
     8341 tgaaggatta tcaacatctg agcactttga gcccgcattt ttaatttaac ttaattcagg
     8401 aggccaaaaa tggataaaga gtatgtagtc attggtctag gtcgcttcgg tggcagtatt
     8461 gtaagagaat tgaacgcgtt agatatggac gtcatggcga tagataaaga tgaaaatcgt
     8521 gtcgatgaat acagtgatat tgcgacacat gccgttgtgg ctgatacgac tgacgaagcc
     8581 gttatgaaaa gtttagggat tcgaaatttt gatcatgtca ttgtggcaat cggagaaaat
     8641 attcaggcaa gtacgttaac aacattgatt cttaaagaac tcggtgttaa aaaagtaacg
     8701 gctaaagcac aaaacgatta tcacgccaag attttaaaca aaattggtgc cgatacagtc
     8761 gtgcatcctg aaagagacat gggtcgtcgt atcgcgcata atgtggctag tgcaacagtg
     8821 ctcgattatt tagagctttc tgatgaacac tccattgtag aaattaaagc gagcgaaacg
     8881 atggcaggac aaacccttat tgacttagat attcgtgcga agtttgggat taatattatt
     8941 gcgattaaaa gagggaagga aatcattgtg gcacccgatc cagatatggg attagaattt
     9001 gatgatattt taattatgat tggtcatgat aatgatttaa cacgatttga gaagaaaatg
     9061 gcgcattaat cattgagaag tggaatggtg gagactgttc cgctttttt
//
LOCUS       DANHPA010000097         9089 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.097, whole genome shotgun sequence.
ACCESSION   DANHPA010000097 DANHPA010000000
VERSION     DANHPA010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 9089)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9089)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9089
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.097"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            158..1225
                     /locus_tag="PTC28_001967"
     CDS             158..1225
                     /locus_tag="PTC28_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717215.1"
                     /translation="MKKYSEAIKIAFAYVGVVVGAGFSTGQEVLQFFSQFGIYSYIGV
                     VISGLILTFIGRQVAKIGTAFDAENHESTLEYLFGKKLGLVIDYVLILSLYAVTITMI
                     AGAGSTFNESFGVPTWLGALIMCIIVYITLLMDFNKIVRALGVVTPVLIVLVVLIAAA
                     SLFQGSIPFSKINSVVEKPNLGIAIWNGFNYGGLAFAVGFSTLVAIGGDASKRLVSGL
                     GGLIGGVVYLVLLGLINFALHSEYTEIKDAAIPTLVLAGKISPILTFVLSIVMLAVMY
                     NTILGLSYSFAARFTSPYTKRYYLMISIIVPLAYALSFVGFEGLIAVVYPMMGVIGLF
                     IVVAVVVKYFYRKSQDKKFIA"
     gene            1268..2293
                     /locus_tag="PTC28_001968"
     CDS             1268..2293
                     /locus_tag="PTC28_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDK5717216.1"
                     /translation="MTNRRKRWILITIIILIVIAGLIAGYFFGSHASKEAENKVSIQN
                     KNVSAFENITYMEGLPNSQLDILMPKHVNADDKLPVIFWAHGGGFIAGDKQYKNPLLA
                     QIVERGYVVVNVNYALAPEYQYPTPLIQMNNAVRFIKAHEQELPINLDEVIIGGDSAG
                     AQINSQFTAIQTNAQLRADMRFEQQFKPEQLKAAIFFGGFYDMQTVRSTEFPRIDLFM
                     RSYTGVKHWETRFKNIAEMSTKNQITSDFPATYLSVGDADPFMSQNVSFADALEKKGV
                     VVERFFFDGSHQLKHQYQFHLQKPESKENIQQVLSFLSRNTANTQVNTEVKDDIHTEI
                     NLNPYEM"
     gene            complement(2558..3079)
                     /locus_tag="PTC28_001969"
     CDS             complement(2558..3079)
                     /locus_tag="PTC28_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDK5717217.1"
                     /translation="MTITIREVSINDVEALTTLMQQVFEESEYMLYDPGEYMPSLENA
                     ISHIETVITSPHLTILVAENEHQLVGYLTVTTQKLRRVEHEVEISMAVLRQFQGLGIG
                     FDLIQHCKNWCREHGITRIALTVVTENKTAIHLYKRAGFKVEGEMRHTLKIQGLYYNE
                     LMMAYLLNDETTV"
     gene            3240..4160
                     /locus_tag="PTC28_001970"
     CDS             3240..4160
                     /locus_tag="PTC28_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HDK5717218.1"
                     /translation="MKPHVLLAGGTGYIGKSLIKELRDTTTLHTISQYPKSQSHADTT
                     VIKGDIYHYADVLRAMEGMDIAVYFLDPTKHSAKLTRALAKDLNLIAADNFGRAAAKQ
                     QVKEIIYVRGSQFDEETVKQLGAYGVPIRTTEHVVKRPHISVEFQTSKYNDIRIAHHI
                     PRPQTWNLAQWIQQLRIWLTITPGTRVTVEQEGQQFKVYRKNSQQLWMQLELEMIDKD
                     LYRLVMTKGRLARLNQGKCMQIEFRYIRQFDFVIAHVFNFIPSALWPIAYFVQVPLIQ
                     MMLRGFDTKCRIRHFQYRKQNGEDLRYTKD"
     gene            4166..4846
                     /locus_tag="PTC28_001971"
     CDS             4166..4846
                     /locus_tag="PTC28_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDK5717219.1"
                     /translation="MDILLVEDDQTLCQQITEALASWNFNVIKVRDFDAVLQTYLEHE
                     PHMILMDITLPKFDGFYWTRQIRQHSSVPIIFISSRDSPMDQVMSMEIGADDYVQKPF
                     HMPVLIAKLQAIFRRVYQYNQQERRTMIWQEAVVDWSKGTVTKQDHVTYLSKTEMLIL
                     EVLLQHKNEIVAREDLMTALWDDEAFVSDNTLTVNVNRLRKKLAAMGMPSVIETKVGK
                     GYIAHDNV"
     gene            4833..5855
                     /locus_tag="PTC28_001972"
     CDS             4833..5855
                     /locus_tag="PTC28_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDK5717220.1"
                     /translation="MTTSRWFLYFLRERIAWILMFVVFDIIMLCFGFLDDDIPYRNLW
                     YVIGIKWIISVFFLIRIFLKETRFYMHLETFEEIEVFQKNQLAETPFEKVTLHYLETK
                     MMQLQQSIGEQQHRIDLNEQSMTEFIHDIKTPVTALKLLIEKEEHHVRKQQLMYEWSR
                     VDYMLDQHLFLARLHHQAHDMYFEKVTLRELVIDEIRQTRHIAMHKRIGFNVDISENT
                     TVYTDKRWMRMVIRQIISNAIKYSTQADIDVYQSIENGNVKLHIRDYGAGIAQHDMPR
                     IFQRGFAAQNGPHVQTSSGMGLYLVETVREALGFDIDVTSQVGEGTTVTIQFSKQNDY
                     IARMSK"
     gene            5961..6722
                     /locus_tag="PTC28_001973"
     CDS             5961..6722
                     /locus_tag="PTC28_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5717221.1"
                     /translation="MSILKVSHVSKIYGNKKQSYEALKDIHFTVEKGGFVAIMGPSGS
                     GKTTLLNVISSIDNVTRGTIEINGQDITRMSNKQLSYFRKKDVGFIFQDYNVLHTLTV
                     RENIMLPLSITKLSRQEAEMRYQEVTEALGITEIGSKYPDEISGGQKQRTAAARALIS
                     KPAIVFADEPTGALDSKSAQDLLKRLETINQQMKTTIVMVTHDPVAASYANRVIMLKD
                     GQIHTELFQGDQPVSQFYQEIIHNQSVLGGVKHAF"
     gene            6712..8610
                     /locus_tag="PTC28_001974"
     CDS             6712..8610
                     /locus_tag="PTC28_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5717222.1"
                     /translation="MRFSAIVLKNFKQNLRHYGIYLFSLMLSIALYFSFVTLKYTDSI
                     ANGENAKLLNSSAGIGEKFLFVIIIIFLMYANRLFIKRRTKSFALFQLIGLSRKDLMR
                     MMMLEQAIIFIGTTVIGLLLGLFGSRLLLLIVKKTAQIPLDIKILFEPAALIVTMILV
                     VISFILIMVQSFIFIKRRSIIQLMYDVQQSEATQANMTKAEMTFGILGIAMIGLGYYL
                     STIMLKNIELTLISAFLILFLTVVGAYFFFRSSVSLIFKSLKRSKRGYVNVTDVVFTA
                     SIMHRMKKNAFSLTVIGIISAITITLLSFATISKANIENNVNGLAPHEFTYINEGEAQ
                     KLEAYLNAKNIPYNKVVQHVIEVPIVHSDKALHKDVNSLPIISDAEVDKMDVNPGEIT
                     LVNYFKVSETFIGLDEGVTIDLGRKEKHAPLEITETSPYNVLSYRAALGRSVGIIDHK
                     TFEMLKATQIKDKDNPPITQVGFDLKSAKDVVKVESANEQFNQMLPQSRTSLEKEQLA
                     FSGMFLFVSGFLGVAFLIAAGCIIYIKQMDENEDEMANYQILRKMGYTHQDMFKGLAL
                     KIAFNFGLPLIIGLGHAFFAARAFNTLMNGVDFAPVIFAMTVYAVIYLIFAVLAYYHS
                     RRVIKFSI"
BASE COUNT         2860 a         1486 c         1889 g         2854 t
ORIGIN      
        1 agggtataaa aaatagcgta taaatgaatt tgatgacatc gtgaacgctg ttgtatcaag
       61 ggatacagac gtttttaaaa ctggatggaa tttgaaatta atgaatgaat atgttttaat
      121 gtttaacgtg ttttgctaac gaggaggtca aaacagtatg aaaaaatata gtgaagctat
      181 aaagatagct tttgcctatg taggggtagt ggtcggtgcc ggcttctcta caggccaaga
      241 agtactgcaa ttttttagtc agttcggtat ttattcctat ataggtgtgg tgatttcggg
      301 gttaatcttg acgtttatcg gtcgtcaagt tgcgaaaatc ggaacagcgt ttgacgcaga
      361 aaaccatgaa tcaacactag agtatttatt tggtaaaaaa cttggacttg tgattgatta
      421 cgttttaatt ttatcattgt atgctgtaac gattacgatg attgcaggtg caggttcaac
      481 atttaatgaa agtttcggcg tgccgacatg gcttggtgca ttgatcatgt gtattatcgt
      541 ttatattacg ttattaatgg acttcaataa gattgtgcgt gcattaggtg ttgtgacacc
      601 ggtactgatt gtgttagtag tactgattgc cgcagcatca ttattccaag gatctattcc
      661 attttcaaaa attaacagtg tagtagaaaa gccgaattta ggtatcgcga tttggaatgg
      721 ttttaactat ggtggtttag ctttcgcagt tggttttagt acgcttgtag ctatcggtgg
      781 tgacgcatct aaacgattag tttcaggttt aggcggctta atcggtggtg tggtttatct
      841 tgtgctatta ggcttaatca actttgcgct tcattctgaa tatacagaga ttaaagatgc
      901 agcgattcct acattagttt tagctgggaa aatttcacct attttaacat ttgtactttc
      961 tatcgtgatg ttagcggtca tgtataatac aattttaggt ttatcttatt cattcgctgc
     1021 acgttttacg tcaccttata cgaagcgtta ttatttaatg atttctatta tcgtcccatt
     1081 agcttatgca ttgagtttcg taggctttga aggtttaatc gctgtcgttt atccaatgat
     1141 gggggttatc ggtctattta tcgttgttgc agtagtcgtg aagtacttct atagaaaatc
     1201 acaagataag aaattcattg cttaattaat aggatatgtt acaatttttc cgaaaggaaa
     1261 gattggaatg acaaatcgta gaaaaagatg gattttgatt accatcatta ttcttattgt
     1321 tatagccggt ctcatagccg gctatttttt tggttctcat gcatcaaaag aggctgagaa
     1381 taaagtttcg attcaaaaca aaaatgtttc agcttttgaa aatattacat atatggaagg
     1441 acttccaaac agtcaactag atattttaat gccgaaacat gtgaatgctg atgacaaatt
     1501 gccagtcatt ttttgggcgc acggcggtgg ctttattgca ggggataagc aatataaaaa
     1561 ccctttattg gcgcaaattg tagagcgcgg ttatgttgtg gtgaatgtca attatgcgtt
     1621 ggcaccggaa tatcaatatc cgacacccct cattcaaatg aacaatgcag ttcgttttat
     1681 taaggcgcac gagcaagagt taccgattaa tttagatgaa gtgattatcg gtggggattc
     1741 tgcgggcgca caaattaaca gtcagtttac agcgattcaa acgaatgcac aattgcgtgc
     1801 tgatatgaga tttgaacagc aatttaagcc agaacaattg aaagcagcta ttttctttgg
     1861 tggtttttac gatatgcaaa ccgtacgttc gactgaattt ccaagaattg atttatttat
     1921 gagaagttat acaggcgtga aacattggga aacacgattt aaaaatattg ctgaaatgtc
     1981 aacgaaaaat caaattacgt ctgatttccc agctacttat ttgtcagtgg gcgatgcgga
     2041 tccatttatg agccaaaatg tttcttttgc tgatgcacta gaaaagaaag gggtcgttgt
     2101 agaacgcttt ttctttgacg gttcacatca attaaaacat caatatcaat ttcatttaca
     2161 gaagccagag tctaaagaga atattcaaca agtattgagc tttttaagtc gaaacacggc
     2221 gaatacacaa gtgaataccg aagtgaaaga tgatattcat acagaaatta atttaaatcc
     2281 gtatgagatg tagttcaata aatggcttgc ggctgtgctc aattgattca gtagtatcca
     2341 tatacatcaa atgcagagaa agaggttggg atcaaattaa cacccagcct ctttctctgc
     2401 atatgtataa aggcaagggg gtgggatatt aagcttccca gcctgttgcc tatgttttgt
     2461 tggatatgaa atgatcttaa ttcatcaaaa atcttaaatg gattaacaat gaatttagtg
     2521 attcgctatt ggaaatggta cactaaacat atcaacgtca cacagttgtc tcatcattta
     2581 ataaataagc catcataagc tcattataat acagaccttg aatttttaaa gtgtgacgca
     2641 tttcaccttc aactttaaat ccagcccgtt tgtagaggtg aatggctgtt ttattttcag
     2701 tgacaacagt taatgcaatt ctagtgatgc cgtgttcccg acaccagttt ttacaatgtt
     2761 gaattaaatc aaacccgata cctaagcctt ggaattgacg taataccgcc atagaaattt
     2821 ctacttcgtg ttcaacgcga cggagctttt gagttgtgac cgtcaaataa ccgactaatt
     2881 gatgttcatt ttctgcgacg aggatggtga gatggggcga agtaatgaca gtttcgatat
     2941 gtgaaatcgc gttttctaat gaaggcatat attcacccgg atcataaagc atgtattctg
     3001 attcttcaaa aacttgttgc atcagtgtag tcaatgcttc cacatcattg atactgactt
     3061 ctcttattgt aatcgtcata cctacacctc cgttcagtac ataatcatag gacacgttgt
     3121 tggaattgtc ataagcttat tgtatcttaa tttaataaat ataggaaatt tctaacatga
     3181 tgaattgagt tttggaaaac ggattataga ttgataataa agtgggaaag gagcttttta
     3241 tgaaaccgca tgtgttgtta gctggaggca ccggctatat cggcaaaagc ttaatcaaag
     3301 aattgcgtga tacgacgaca ctacatacta tttcacaata tcctaaaagt cagtcacacg
     3361 ctgatactac agtgattaaa ggtgatattt atcattatgc tgatgtgtta cgtgcaatgg
     3421 aaggaatgga tattgcggtc tactttttag atccgacgaa gcattcagcc aaattgaccc
     3481 gtgccttagc gaaagattta aatttaatcg cagcagataa ttttgggcgt gcagcagcaa
     3541 agcagcaagt gaaagaaatt atttatgtgc gcgggagtca atttgatgag gagaccgtga
     3601 aacaactcgg ggcttatggt gtccctatta gaacgactga gcatgttgtt aaacggccgc
     3661 atatttctgt tgaatttcaa acatcaaaat acaatgatat tcgtattgca caccatatcc
     3721 cgagaccaca aacatggaat ttagcgcaat ggatacaaca attgcgtata tggcttacga
     3781 taacaccggg cacgagggtt acggttgaac aagaaggcca acaattcaaa gtgtatcgca
     3841 aaaatagtca acagttatgg atgcaattag aacttgaaat gatagataaa gatttatatc
     3901 gattggtaat gacaaaagga cgattagcac gattaaatca aggcaagtgc atgcaaattg
     3961 agtttcgtta cattcgtcaa tttgattttg tgattgcaca tgtttttaat tttattccaa
     4021 gcgcactctg gccgatcgca tatttcgttc aagtgccgtt gattcaaatg atgttgcgtg
     4081 gttttgatac gaaatgtcgc attcgtcatt ttcaatatcg taaacaaaat ggagaggact
     4141 tacgttatac aaaggactga tgaaaatgga tatactcctt gtagaagatg atcaaacttt
     4201 atgtcaacaa attactgaag cattagccag ttggaatttt aatgtgatta aagtccgcga
     4261 ttttgatgcc gtgctccaaa cttatctcga acatgaaccg catatgattt taatggatat
     4321 tacgttgccg aaatttgatg gtttttattg gacacgccaa attcgtcaac attcaagtgt
     4381 gcctatcatt ttcatttcgt ctcgtgatag tccaatggat caagtgatga gcatggaaat
     4441 tggtgccgat gattatgttc aaaagccgtt tcatatgccc gtactcattg cgaaacttca
     4501 agcgattttt cgacgtgtgt atcaatacaa tcaacaagaa cgtcgaacaa tgatttggca
     4561 agaggctgtc gtcgattggt ctaaaggaac ggtgaccaag caagatcatg tgacgtattt
     4621 atccaaaact gaaatgctga ttttagaagt gctgctacaa cataaaaatg agattgtggc
     4681 gagagaagac ttaatgacag cgctctggga tgacgaagcg tttgtgagtg ataatacatt
     4741 aacggtcaat gtaaatcgtt tacgtaaaaa gttggcagcg atggggatgc cgtcagtcat
     4801 cgaaacaaaa gttggaaagg gatatattgc acatgacaac gtctagatgg tttttatatt
     4861 tcttgagaga gcgtatcgcc tggattttaa tgtttgtcgt ttttgatatc attatgttgt
     4921 gttttgggtt tttagatgat gacattcctt atcgcaattt gtggtatgtc atcgggatca
     4981 agtggattat cagcgtgttc tttttgattc gtatattttt aaaagaaaca cggttttata
     5041 tgcatttaga gacttttgaa gagattgaag tcttccaaaa aaaccaactt gcagaaacgc
     5101 cttttgaaaa agtaacactg cattatttag aaacaaagat gatgcagcta cagcaatcga
     5161 taggcgaaca gcaacaccgc attgacctca atgaacagag tatgacggaa tttattcacg
     5221 atattaaaac acctgtgacg gcgctcaagt tattgattga aaaagaagaa catcatgtga
     5281 gaaaacagca gctcatgtat gaatggtcgc gcgttgacta tatgttggac caacacttat
     5341 ttttagcacg tcttcatcat caagcacatg acatgtattt tgaaaaagtg acattgcgtg
     5401 aacttgtcat tgatgaaata cgacagaccc gtcatatcgc gatgcacaaa aggattggct
     5461 ttaacgtaga tatttctgaa aatacgacgg tgtacacgga taagcgatgg atgcgtatgg
     5521 tcattcgtca aattatttca aatgcgatta agtattctac gcaagcggat attgacgtgt
     5581 atcaatcgat tgaaaacggc aatgtaaagt tacatattcg tgattacggc gcagggattg
     5641 cacaacacga tatgccgcgt atttttcagc gtggtttcgc agcgcaaaat ggcccgcatg
     5701 tacaaacctc ttctggcatg gggctttatt tagtggaaac agtccgtgaa gcactcggat
     5761 ttgatatcga tgtcacgtct caagttggtg aaggtacgac ggtcacgata cagttttcaa
     5821 aacaaaacga ttacatcgca cgcatgtcga agtgacaaaa ctgtcacatg agacatgcgt
     5881 tttgtcacgt gattcgcacg cttttatggt tgttgttcgc taaaataaaa gtatcaattc
     5941 atcgtaaagg agtgttcaac gtgtctattt taaaagtgag tcacgtgagt aaaatatatg
     6001 gcaataaaaa gcaatcatat gaagcattaa aggatatcca tttcacagtg gaaaaagggg
     6061 gatttgtggc gattatgggg ccttcaggat cggggaagac aactttgtta aacgtcatta
     6121 gttctatcga taatgtgaca agagggacaa ttgaaattaa cggccaagat attacgagaa
     6181 tgtctaataa acaattatct tactttagaa aaaaagatgt cggattcatt ttccaagatt
     6241 acaatgtgtt gcatacttta acagttcgag aaaatattat gttgccgctc tcgattacga
     6301 aactcagtcg tcaagaagcg gaaatgcgtt atcaagaagt gacagaggcg ttagggatta
     6361 ctgaaatcgg aagcaaatat cctgacgaga tttcgggagg acaaaaacaa cgtaccgcag
     6421 cagcccgtgc attaataagt aaacccgcga ttgtatttgc agacgaacca actggtgcac
     6481 tcgactctaa aagcgcacaa gacttattga aacgtttaga aacgattaac caacaaatga
     6541 aaacgacaat tgtcatggta acacatgatc cagttgcggc aagttatgcg aatcgtgtca
     6601 ttatgttaaa agatggtcaa attcatacgg agttattcca aggcgatcaa cctgtttcac
     6661 aattttatca agaaatcatt cacaaccaga gcgtattggg cggtgtgaaa catgcgtttt
     6721 agtgcgattg tcctcaaaaa ttttaaacaa aacttaagac attatgggat ttacttgttt
     6781 tctttaatgc tcagtatcgc actttatttt agttttgtaa ctttaaaata taccgatagc
     6841 attgcaaatg gagaaaacgc gaaactgtta aattcaagtg caggaatcgg tgaaaagttt
     6901 ttatttgtga ttattatcat ttttttaatg tatgcaaatc gtctatttat taaacgccgg
     6961 acgaaaagtt ttgcgctgtt tcaactcatc ggtttatcac gtaaagattt aatgcgcatg
     7021 atgatgttag aacaagcgat tatctttatc ggaacaacag tcatcggatt gcttctagga
     7081 ttgtttggtt cgcgtttgtt gctgctgatt gttaaaaaaa cagctcaaat tccgctagat
     7141 attaaaattt tatttgaacc tgcagcgctc atagtgacga tgattttggt ggtcatttca
     7201 ttcatcttaa ttatggtgca aagtttcata ttcattaagc gtcgttcgat tattcaactg
     7261 atgtatgatg tgcagcaaag tgaagcgaca caagcgaata tgaccaaggc agaaatgact
     7321 tttggaattc ttggcattgc gatgatcgga ttaggatatt acttatcgac aatcatgctc
     7381 aaaaatattg aacttacctt aatttctgcg tttttaatac tctttttaac tgttgtaggg
     7441 gcgtacttct ttttcagaag ttccgtgtcg ttaattttta aatcgttaaa aagaagcaaa
     7501 cgcggttacg tcaatgtgac agacgttgtg tttactgcgt cgattatgca ccgaatgaaa
     7561 aagaacgctt tctcattaac agtaattggg attatttcag caattacgat tacattatta
     7621 tcttttgcga cgattagtaa agcaaacatt gaaaataatg taaatggctt agcacctcat
     7681 gaatttacgt atattaatga aggagaggct caaaagcttg aagcgtattt aaatgcgaaa
     7741 aatattccat ataataaagt cgtacaacat gtcatcgaag tgccaattgt ccattcggat
     7801 aaagcattgc ataaagatgt taacagctta ccaattatta gtgatgcaga agttgacaaa
     7861 atggatgtaa atccaggtga aatcacatta gtcaattact ttaaagtatc agaaactttt
     7921 attggattag atgaaggtgt aacaatcgat ttaggacgta aagaaaagca tgcgccatta
     7981 gaaattacag aaacgtctcc atacaatgtg ttatcgtatc gtgcagcttt gggacgatct
     8041 gtaggaatta tcgatcataa aacatttgag atgctcaaag caacgcagat taaagataaa
     8101 gacaatccac cgattacgca agtgggattt gatttaaaaa gtgcgaaaga tgttgtaaaa
     8161 gttgaaagtg cgaatgagca attcaatcaa atgttaccac agtctcgtac atcattagaa
     8221 aaagaacaat tggcattttc aggtatgttc ttgtttgtga gtggcttctt aggtgttgcc
     8281 tttttaatcg cagcaggatg tatcatttac attaaacaaa tggatgaaaa tgaagatgaa
     8341 atggcaaact atcaaatttt acgtaaaatg ggttacacac accaagacat gtttaaagga
     8401 ttagcattga aaatcgcttt taactttgga ttaccattaa tcattggttt aggacatgcc
     8461 ttttttgcag cacgagcctt taatacattg atgaatggtg tggactttgc gcctgttatt
     8521 tttgcgatga cagtttatgc ggtcatttat ttgatatttg cagtgctcgc ttattatcat
     8581 tcgagacgtg tgattaagtt ttcgatatag caatgcgggg gaggaagatg atgttcaggt
     8641 tgagccagat gcatcttttt atcccgtcac cctaggtttt actattgcaa cgtaccctcg
     8701 ttaaactgag atttaacggg gttttttgtt gtgatacgtt tcgttttctt cattcataag
     8761 tttgtcctca ttcattcgct gtctttgatt ttcaattgct aaaaatgggc gaaacttcta
     8821 acgaatcaga tgtagctaaa ttaagtggag gcaagtccat agaaacgcga acctatgcta
     8881 ctaagtgtga atttaaaatt tccgaatcac atcacctcaa tgataagttt ttattatcac
     8941 gttaaagcgt gtggtgatgt aaaaatgagt cagtaaaaag cttaaaacaa ttttctgaga
     9001 ttttaattat tttacaaaag cgacatattc aaggcgcttt gtatcgaaaa gttacaaaat
     9061 acgctacaaa taatgctttc atctcaccg
//
LOCUS       DANHPA010000098         9087 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.098, whole genome shotgun sequence.
ACCESSION   DANHPA010000098 DANHPA010000000
VERSION     DANHPA010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 9087)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9087)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9087
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.098"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..120
                     /locus_tag="PTC28_001975"
     CDS             <1..120
                     /locus_tag="PTC28_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001059082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HDK5717223.1"
                     /translation="VHFSAIVGDGYKSLEEGQNVDFDIVEGERGAQAANVVKM"
     gene            complement(181..447)
                     /locus_tag="PTC28_001976"
     CDS             complement(181..447)
                     /locus_tag="PTC28_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HDK5717224.1"
                     /translation="MPNYSYTCRNCGTFTIRQNISEQHETVPCPSCHQIAKREFLPFQ
                     TYKMDHRVKQRIEKGQQPRLVKREALPKKPPRAPQVTRPWMAGH"
     gene            complement(447..1637)
                     /locus_tag="PTC28_001977"
     CDS             complement(447..1637)
                     /locus_tag="PTC28_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HDK5717225.1"
                     /translation="MSKKLFSIDLNKKMDEQAHPGHNRWHPDIPAAFSVEPGETFRME
                     CLDWTDGQISNNDDPSDIKYVNLNRVHVLSGPVYVNGVEPGDLLVVDILDVGAFPEHE
                     WGFNGIFDKTNGGSFLVDHYPNAQKSIWDFHGIFASSRHVPGVEFVGVIHPGLIGVAP
                     SQDMLVEWNRRERALVDTDPNHVPPLANLPTEDAVVLGTLKGKNFDRVAKEGARTVPP
                     RENGGNCDIKNLSKGSRIYFPVYVEGAKLSVGDLHFSQGDGEITFCGGIEMPGWIDLR
                     VNVIKEGMEKYQIKKNPAFNPSPVLPNYSDYIVFEGISVNEFSGKQTYLDANTAYRNA
                     CLNAIEFLKTRGFTGEQAYMLLGSAPVQGTVAGIVDVPNACCTIAIPREIFKPGVIPE
                     KDAF"
     gene            complement(1821..2081)
                     /locus_tag="PTC28_001978"
     CDS             complement(1821..2081)
                     /locus_tag="PTC28_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1871 family protein"
                     /protein_id="HDK5717226.1"
                     /translation="MANNDLNIRLYQYLADWNPMQFDDPTMGDAEVYEMMDAVHQIGE
                     AEAVAQAFQQIYQFSFDETLSYDVCLVKATEAVNMQTECNIS"
     gene            complement(2103..2696)
                     /locus_tag="PTC28_001979"
     CDS             complement(2103..2696)
                     /locus_tag="PTC28_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDK5717227.1"
                     /translation="MTNYPQLTKEIQENEIKVIMHTNKGDMTLKLFPEIAPKTVQNFV
                     ELSKKGYYDGITFHRVINDFMIQGGDPTGTGMGGESIYGGPFEDEFSMNAFNLYGALS
                     MANAGPGTNGSQFFIVQMKEVPAQMVDQLVDGGWPKEIAEAYKEKGGTPWLDQKHTVF
                     GQLIEGEDTLEDIASVKVGAQDKPMYDVVIESIDIEE"
     gene            2770..3150
                     /locus_tag="PTC28_001980"
     CDS             2770..3150
                     /locus_tag="PTC28_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase"
                     /protein_id="HDK5717228.1"
                     /translation="MLYRFAHKTGVYAVEVVEENGDQVLVKVLQVIKHPKQGDLHNPN
                     EVEGVFFHERKALSLYEKRFTSPSRLKPFEGDIEEYTVTLQRAITTLEHQLQEMDTPF
                     AHASLNCLAQLKEDYARQYKTNFS"
     gene            3277..5694
                     /locus_tag="PTC28_001981"
     CDS             3277..5694
                     /locus_tag="PTC28_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit A"
                     /protein_id="HDK5717229.1"
                     /translation="MSWLHMAVLLPLIFAILIPILYRYYKRIHLGWFVLPIPVVLFAY
                     FLSYIKPTMSGQFTEQSAAWMPQIGMNFDVYVDGLGLLFSLLITGIGSLVVLYSISYL
                     SQSEQLGHFYCYLLMFMSAMLGVVLSDNLLVLYFFWELTSFSSFLLISFWRHKDKSLY
                     GAMKSMMITVFGGLSLLGGFILLYLASGTWRIRDIIDNVDQIQTSPIFLLAMIFVIIG
                     AMTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLIARLTPIFAVSQGWIWAV
                     TAFGLVTLFWGSLNATKQQDLKGILAFSTVSQLGMIMSMLGIGAVSYHFQGDESQLYL
                     AAYSAAIFHLINHATFKGALFMITGAVDHATGTRDTRKLGGLMTIMPISFTLSIITSL
                     SMAGVPPFNGFLSKEAFIESMIEVTHASVFSLNTVGLLIPIVAIVGSIFTFVYSFKFI
                     VEIFLGDHKPDVLPNKAHEASILMNISPAILAGLVILIGLFPSIVSAPLVEPAVKSIA
                     NTNEVSASFHLWHGFTPALIATLVIYVVGAVLILTAKRWVPILRGIPNALTLNHWYNQ
                     TGRYTPYYATQITRTYMTGFNRNNLVIIFFMMIVLTFVTLIFVPFTVDFMKVSPIRLY
                     EFVSVITITIAAIMIIFARSRLFSIIMLSAVGYSMAIFFIFFNAPDLALTQFVVETIS
                     TALFLLCFYHLPNMSRYNESVRYRVVNMIISIGVGAVVIVLGLIAYGNRHFESISEFY
                     KAHVYDLAEGKNMVNVILVDFRGTDTLFESSVLGIAGMGIYTLIKLRAKHKNGYERVE
                     KVEQTEK"
     gene            5657..6103
                     /locus_tag="PTC28_001982"
     CDS             5657..6103
                     /locus_tag="PTC28_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)/H(+) antiporter subunit B"
                     /protein_id="HDK5717230.1"
                     /translation="MKGLRKLNRQKNDLIAQYSSLIIFFLIMMFGFSLFLAGHYTPGG
                     GFIGGLLVSSALVIIAVAFDVKTLRKVFPWDFKKLIAVGLTFCVGAPMLSWTYGKNFF
                     THTSVDIPLPLLQPMHVHTAVIFDTGVLFVVIGTVLTIILTIGENE"
     gene            6103..6450
                     /gene="mnhC1"
                     /locus_tag="PTC28_001983"
     CDS             6103..6450
                     /gene="mnhC1"
                     /locus_tag="PTC28_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002441784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter Mnh1 subunit C"
                     /protein_id="HDK5717231.1"
                     /translation="MEIVLIVVCGLLTSISVYLILSKSLIRIIIGTTLLSHAANLFIL
                     TMGGLKNGNVPIYEKGVSDYVDPIPQALILTAIVISFAVTAFFLVLAFRSYKELGTDN
                     VERMKGVPQEDDE"
     gene            6440..7939
                     /locus_tag="PTC28_001984"
     CDS             6440..7939
                     /locus_tag="PTC28_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000573077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit D"
                     /protein_id="HDK5717232.1"
                     /translation="MMNENLIIMVLVVPIMTAILLIVSGLRPFIKRYIALTGTLVTLA
                     FSIWNLVNVWQSGHPIVLRLGSWEAPYSIVFVLDLFSALLVTTSIIITLLIILFSYQS
                     IGLHRETYYYYFTVMMMLTGINGAFITGDIFNLFVFFEVFLMSSYSLMVIGGTKIQLQ
                     ESVKYLLVNVVSSAFFVMAVGILYSIVGTLNLADISLKLNTLSEDHPGLLSVAFILFI
                     FVFATKAGVFPMYVWLPGAYYAPPFAIIAFFGALLTKVGVYAIARVMSLFFHDTLTFS
                     HYTILALALLTIIFGSVGAVGFRDTKRIILYNIMIAIGVILVGVGLMNESGMVGAIYY
                     TLHDMLIKAALFFLIGIMFKITKTTDLRKFGGLIHHYPLLGWTFFIAALSLAGIPPLS
                     GFYGKLYIVQAAFEEGFYATGIIVLLSSLVVLYSVINIFLRGFFGKSYGYVYNPRLHH
                     RGLLAVSVLAVVISVVFGLTAGQLYPIVAEAAKSFYQPDTYIHSVLGVQ"
     gene            7941..8420
                     /locus_tag="PTC28_001985"
     CDS             7941..8420
                     /locus_tag="PTC28_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit E"
                     /protein_id="HDK5717233.1"
                     /translation="MAIQIVINLFLAIFWLFVSDSYTMNAFVLGYLFALLLVFLMRKL
                     LPGRFYVITLYKVIKLVFVFLLELIKANIDVLRIILQPRIKNESAFFVYETDLEHPWQ
                     VALLSNLITLTPGTVVIGVNDDMKRLYIHCLNFSTKEEEVAGIKGSLEKAVREVGES"
     gene            8420..8713
                     /locus_tag="PTC28_001986"
     CDS             8420..8713
                     /locus_tag="PTC28_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)/H(+) antiporter subunit F1"
                     /protein_id="HDK5717234.1"
                     /translation="MNYDIFIIIALVIVVLSILAMLVRVILGPTLPDRVVALDAIGIQ
                     LMAVIGLFSIILGTHYMIVAILLIGILAFLGTAVFAKFMDKGQVIEHDRNDHD"
     gene            8691..9047
                     /locus_tag="PTC28_001987"
     CDS             8691..9047
                     /locus_tag="PTC28_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000590451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit G1"
                     /protein_id="HDK5717235.1"
                     /translation="MTETITISIGLILVIVGALFSALAAIGMIRLDDVYSRAHAAGKA
                     STLGAMLLLTGTFIYFIGKEGYVNFQLIIGIVFVFITGPLASHLVLKAAYNLKTPASK
                     RLKLDEIKEDMKGTKL"
BASE COUNT         2471 a         1794 c         1752 g         3070 t
ORIGIN      
        1 gtacatttct cagcaatcgt tggagatggc tacaaatctt tagaagaagg tcaaaatgtt
       61 gactttgata tcgttgaagg cgaacgtggt gcacaagcag caaacgttgt taaaatgtaa
      121 tctaaatcat ttaatataga agagacgagg cgtgatgccc cgtctctttt ttacgttctt
      181 ttaatgacct gccatccatg gtcgtgtcac ttgtggtgct cgcggtggct ttttaggcaa
      241 ggcttctctt ttaacaagac gtggctgctg gcctttttcg atacgttgtt taacacgatg
      301 atccattttg tacgtttgaa atgggagaaa ttcacgttta gcgatttgat gacacgatgg
      361 acacggtaca gtttcatgtt gctctgaaat gttttgccga attgtaaatg taccacagtt
      421 cctacacgta taagagtaat ttggcattag aacgcatcct tctctggtat tacgcctggt
      481 ttaaagattt ctcgtggtat ggcgattgta caacatgcgt tcggaacgtc aacaatgcct
      541 gcaacagtcc cttgcacagg tgctgatccg agtaacatgt aggcttgctc accagtaaag
      601 ccccgtgttt ttaaaaattc gattgcattt aaacatgcat tgcgataggc tgtattagca
      661 tctaaatagg tttgcttccc cgaaaattca ttgaccgaaa tgccttcaaa cacaatatag
      721 tctgagtagt ttggcaatac tggacttggg ttaaacgctg gatttttctt aatttgatac
      781 ttttccatgc cttccttaat cacgttcact ctcaaatcaa tccatccagg catttcgata
      841 ccgccacaaa aagtaatttc accgtctcct tgtgaaaaat gtaagtcacc tactgataat
      901 tttgcacctt caacatatac tggaaaataa attcgcgaac ctttggataa gtttttaata
      961 tcacaattcc caccattttc gcgtggaggt acggtacgcg caccttcttt agcgacacga
     1021 tcaaagttct ttccttttaa agtgccaagt acgaccgcat cttcagtcgg taagttcgcg
     1081 agcggtggca catgattcgg atcagtatct acaagtgcgc gttctcttct attccactct
     1141 actaacatgt cctgagacgg tgcaacacca attaaacccg gatgaataac acctacaaac
     1201 tcaacaccgg gtacgtgtcg acttgatgca aaaataccat gaaagtccca aatcgatttc
     1261 tgtgcattcg gataatgatc gactaaaaaa cttcccccat ttgtcttgtc aaaaataccg
     1321 ttaaagcccc attcatgttc tggaaaggca ccgacatcta aaatatcaac gactaataaa
     1381 tcgccgggtt cgacaccatt cacatacact ggaccactta acacatgaac acgattgaga
     1441 ttcacatatt taatgtcact cggatcatca ttgtttgaaa tttgcccgtc tgtccagtcc
     1501 aaacattcca tacgaaacgt ttctcctggc tcgactgaaa atgctgctgg aatatctgga
     1561 tgccaacgat tgtgtcctgg atgtgcttgt tcgtccattt tcttatttaa atcaatacta
     1621 aataactttt tcgacatgac aattccccct attgtttgga tatgacagaa tcttccatca
     1681 cttaagattc ttttacccac aaaacgaaaa agtacactat ttttacaatt aaattccaat
     1741 aaaatagact gtagcacttg atagactaaa agaaaaagcc gataaaaatc actctcgatc
     1801 tttaccgact tcactattca ttaagaaata ttgcattccg tttgcatgtt gaccgcttct
     1861 gtcgctttca ccaaacaaac atcatacgat aacgtttcgt caaaggaaaa ttgataaatc
     1921 tgttgaaacg cttgtgcaac ggcttctgcc tcgcctattt gatgtactgc atccatcatt
     1981 tcgtaaactt ctgcgtctcc cattgttggg tcatcaaatt gcataggatt ccaatccgct
     2041 aaatattgat acaatcgaat attcaaatca ttatttgcca cgtgatgacc tccattcatt
     2101 gattattctt caatgtcaat cgattcaatg acaacatcgt acattggttt gtcttgtgca
     2161 ccgactttaa cacttgcgat atcttctaaa gtatcttcac cttcaatcaa ttgaccgaat
     2221 actgtgtgtt tttgatctaa ccaaggtgta ccgccctttt ctttgtatgc ttcagcgatt
     2281 tcttttggcc agccgccatc aacaagttgg tctaccattt gtgcaggcac ttctttcatt
     2341 tgaacgatga aaaattgtga accattcgta cctggacctg cattggccat tgataacgca
     2401 ccgtataagt taaacgcgtt cattgaaaat tcatcttcaa atgggccacc gtaaatactt
     2461 tcgccaccca taccagtacc agtcgggtcg ccaccttgaa tcataaagtc attgatgaca
     2521 cggtggaacg tgatcccatc gtagtaacct tttttagaaa gctcaacaaa gttttgaact
     2581 gttttaggtg caatctcagg gaataacttt aatgtcatgt cccctttatt cgtatgcatg
     2641 atgactttaa tttcattttc ttgaatttct ttcgttaatt gtggatagtt agtcattttt
     2701 taatactcca ttcgtgataa actgttgtat ataactattt taacatattt gagagaggat
     2761 ggtattgaca tgctttatcg atttgcacat aaaactggtg tctatgctgt agaggtcgta
     2821 gaagaaaacg gggatcaggt attagtcaaa gtgctacaag tgattaaaca cccgaaacaa
     2881 ggcgacctcc acaatccaaa tgaagttgaa ggagtctttt tccatgaacg aaaagcgtta
     2941 agtctctatg aaaaaagatt tacgtctcca agtcgcttaa aaccttttga aggtgacatt
     3001 gaagagtata cagtgactct gcaacgtgcg attactacac tcgaacatca attacaagaa
     3061 atggataccc cttttgcgca tgcatcctta aattgtttgg cgcaacttaa agaagattat
     3121 gcacgccaat ataaaacaaa tttttcataa tattgacgtg tttcttctta tttaaaagtg
     3181 attgaaatct agacgcatct atgtatagcc atgtttttca gacgtttcac aatcatgtat
     3241 aatagattta tcgtagtttt taaaggaggg caatttatga gttggttaca tatggcggta
     3301 ctgttgccgt taatattcgc aatactcatt ccgatattgt atcgctacta caaacgcatc
     3361 catctcggtt ggtttgtttt accgataccg gtcgtattgt ttgcttattt tttatcttat
     3421 attaaaccaa caatgtccgg gcaatttaca gaacagtctg ctgcttggat gccacaaatt
     3481 gggatgaact ttgacgttta tgtcgatggt ctaggcttac tttttagttt actgattact
     3541 ggcattggga gtcttgttgt actatattca attagttatt taagccaatc agagcaactc
     3601 ggccattttt attgttactt gttaatgttt atgagtgcga tgctcggcgt cgtcctctct
     3661 gataatttac tcgtccttta tttcttctgg gagttaacat cattttcaag tttcttattg
     3721 atttcttttt ggcgacacaa agacaagtca ctgtatggtg cgatgaagtc gatgatgatt
     3781 accgtttttg gtggtttatc actactcggt ggtttcattt tactttacct cgcttcaggc
     3841 acatggcgta ttcgtgacat tatcgataac gttgatcaga ttcaaacgtc accgattttt
     3901 ctactcgcca tgatttttgt gattattggt gcaatgacaa aatctgcaca atttccattt
     3961 tacatttggt tacccgatgc gatggaagca ccgacaccag tcagtgcata tcttcattct
     4021 gcaacaatgg ttaaagcagg tatctatctt attgcccgtt taacaccgat ttttgcagtg
     4081 tcacaaggat ggatttgggc tgtaaccgca tttggtctcg tgacactttt ctggggatcg
     4141 cttaatgcga cgaaacaaca agatcttaaa gggattttag cattttcaac tgtctctcaa
     4201 ctcgggatga ttatgtcgat gctcggtatt ggtgcagtga gctatcattt ccaaggcgat
     4261 gaaagtcaat tatacctagc cgcatacagt gcagcgattt tccatcttat caaccacgca
     4321 acatttaaag gggcactgtt tatgattaca ggtgccgtgg accatgcgac gggaacgcgt
     4381 gatactcgta aactcggtgg cttaatgacg atcatgccga tttcattcac tttatctatc
     4441 attacgtcat taagtatggc gggggtgccc ccatttaacg gtttcttatc taaggaagcc
     4501 tttatcgaat ctatgataga agtaacacac gcctctgttt ttagtttaaa cacagtcggc
     4561 ttgttaatcc ctatcgtcgc gattgtcgga agtattttca catttgtata ttcgtttaaa
     4621 tttattgtgg aaattttctt aggtgatcac aaacctgatg tacttccgaa caaagcacat
     4681 gaagcttcaa tactgatgaa tatttcacca gcgattttag ccggtttagt cattttgatt
     4741 ggattattcc ctagtattgt ctctgcaccg ctcgttgaac ctgcagtcaa atccattgcg
     4801 aacaccaatg aagtgagtgc gtcattccat ttatggcacg gcttcacacc agcacttatc
     4861 gcaactttag tcatttatgt tgtcggtgct gtactcatat tgacggccaa acgttgggta
     4921 ccaatactaa gaggtattcc aaacgcattg accttaaatc attggtataa ccaaacagga
     4981 cgttacacgc cgtactacgc gacacaaatt acgcgtactt atatgacagg tttcaatcgc
     5041 aacaatttag tcattatctt tttcatgatg attgtcctta cttttgtgac actgattttc
     5101 gtacctttca cagttgactt tatgaaggtt tcgcctatca gactttatga atttgtatca
     5161 gtgattacga ttacgattgc ggcgattatg attatttttg cacgttcacg attgttcagc
     5221 attatcatgt taagtgctgt cggatactct atggcgattt tctttatttt ctttaatgcg
     5281 cctgaccttg ccttaactca attcgtcgta gaaacgattt caacggcatt gttcttactt
     5341 tgtttctatc acttgcctaa tatgagtcgt tacaacgaat ctgtacgcta tcgtgtcgtt
     5401 aatatgatca tttctattgg ggtcggtgca gtggtgattg tgttaggttt aatcgcatac
     5461 ggcaaccgcc acttcgaatc tattagtgaa ttctacaaag cacatgtgta tgacttagct
     5521 gaaggtaaaa acatggtgaa cgtgatactt gtcgacttcc gtggtaccga tacattgttc
     5581 gaatcatctg tactcggtat tgcaggtatg ggcatttaca cattaattaa attacgtgcg
     5641 aaacataaaa acggttatga aagggttgag aaagttgaac agacagaaaa atgatttaat
     5701 tgcgcagtat tcatcattaa ttatcttttt cttaattatg atgttcggct tctcactttt
     5761 cttagctgga cattatacac cagggggcgg ctttatcggt ggtttactcg tctcaagtgc
     5821 gctcgtcata attgcagtgg catttgacgt taaaacattg cgtaaagttt tcccgtggga
     5881 tttcaaaaag ttaattgctg taggcttaac gttttgtgtc ggtgcaccta tgcttagttg
     5941 gacatatggt aaaaacttct tcacacatac gtctgtggat attccgttgc cattgttaca
     6001 accgatgcat gtgcatacag ctgtgatttt cgataccggc gtcctttttg tcgttatcgg
     6061 cacagtgctt acaattattc taacgattgg agagaatgag taatggaaat tgttttaatc
     6121 gtcgtttgcg gcttgttaac ttccatcagt gtgtacctca ttctttctaa aagtttgatc
     6181 agaattatta tcggtacaac attattatca cacgctgcaa acttatttat tttaacaatg
     6241 ggtggactta aaaacgggaa cgtccctatt tatgaaaaag gcgtttctga ttatgtagat
     6301 ccgatcccac aagcattaat tttaacagcg attgttattt catttgcggt tactgccttt
     6361 ttcttagtac tcgctttcag aagttataaa gaattaggaa cagacaacgt agaaagaatg
     6421 aaaggagtgc cacaagaaga tgatgaatga aaacttaatc attatggtgt tagttgtccc
     6481 aattatgaca gcgattctgt taattgtcag tggactccga ccttttatta aacgttacat
     6541 cgcattaact ggaacgcttg tcacgttagc attttcgata tggaatttag tgaacgtatg
     6601 gcaaagcggt catccgattg ttttaagatt ggggtcatgg gaggcaccct atagtatcgt
     6661 tttcgtactc gatttattta gtgcccttct cgtgacaact agcattatta ttacgttact
     6721 gattatttta ttttcgtacc agtcgattgg gttacatcgt gaaacatatt attactattt
     6781 cacagtcatg atgatgctca cagggattaa cggtgcattt attacaggcg atatctttaa
     6841 cttattcgtc tttttcgaag tatttttaat gtcatcttat agcttaatgg tgattggtgg
     6901 cactaaaatt caacttcaag aaagtgttaa atacttgtta gtgaacgtcg tctcttctgc
     6961 ctttttcgtc atggcggtcg gcattttata ctctatcgtc ggtacattga acttagcgga
     7021 cattagtcta aaattaaata ccctttctga agatcatcca ggtttactca gtgtcgcatt
     7081 tattttattc atctttgtat ttgcgacaaa agctggggtc ttcccaatgt atgtctggtt
     7141 accaggggct tactatgcgc caccatttgc cattattgcg tttttcggtg ccctacttac
     7201 aaaagtcggc gtttatgcga ttgcacgtgt catgagttta ttcttccatg atacattgac
     7261 tttctcacac tacacgattt tagcactcgc attgttaacc attatttttg gttcagtcgg
     7321 tgcagtcggt ttccgtgata cgaagcgtat tattttatac aacattatga ttgcaattgg
     7381 cgtcatttta gttggtgtgg gcttaatgaa cgaatcaggt atggtcggtg ctatttacta
     7441 cacccttcac gatatgttaa ttaaagccgc gctatttttc ctgattggga ttatgtttaa
     7501 aattacgaaa acaacggact tacgtaaatt tggtggtctg attcatcatt atccattatt
     7561 aggttggaca tttttcattg cggcattaag tttagctggg attccgccat taagtggttt
     7621 ttatggcaaa ctttacatcg tgcaagctgc atttgaagaa ggattctatg cgacaggtat
     7681 aatcgtactg ctttcaagcc tagttgtact ttattcagtt atcaacatct ttttacgtgg
     7741 tttctttggt aaaagttacg gctatgtgta caacccacgc ttacatcacc gcggtttatt
     7801 agccgtgagt gttttagcag tcgttatttc ggtggtcttt ggtctgacag caggacaact
     7861 gtatccaatc gttgcagaag ctgcgaagtc attctatcaa ccagacacgt atattcatag
     7921 cgtattgggg gtgcagtaat atggcaatac aaatcgtcat caatttattt ttagcgatat
     7981 tttggttgtt cgtctctgac agttatacga tgaacgcttt cgtcttagga tatcttttcg
     8041 ctttattact tgtattttta atgcgtaaac tattacctgg acgcttttac gtgattacgc
     8101 tatacaaagt cattaaactc gtatttgtct ttttactcga actcatcaaa gcgaatattg
     8161 atgtattgcg tattatcctt caaccacgca ttaaaaatga atctgctttt ttcgtttatg
     8221 aaacagactt agagcaccct tggcaagtcg cgttattatc aaatttaatc acattaacac
     8281 ctggtactgt cgtcatcggg gttaatgatg atatgaaacg tttatatatt cactgtttaa
     8341 acttctcgac aaaagaagaa gaagttgctg gaattaaagg ctctcttgaa aaagcagtga
     8401 gagaggtggg cgaatcgtaa tgaactatga tattttcatc attattgctt tagtcatcgt
     8461 cgttttatcg attttagcaa tgcttgtccg tgtgattctt ggtcctacat tgccagatcg
     8521 tgtcgtggca ttagatgcga ttggcattca gttaatggcg gtcatcggat tgttctcaat
     8581 tattttaggt acacattata tgattgtagc gattctttta attgggattt tagccttttt
     8641 aggtacagcc gtgttcgcca aatttatgga taaaggtcag gtgattgaac atgacagaaa
     8701 cgatcacgat tagtatcggg ttgattcttg ttatcgtcgg tgcgttattt agtgccctcg
     8761 cagccattgg aatgatacgt ctcgatgatg tctactctcg tgcgcatgct gcgggtaaag
     8821 cttcaacact tggcgcaatg ttgttattaa ccgggacatt tatttatttc atcggtaaag
     8881 aaggctacgt caactttcaa ttaattatcg ggattgtctt tgtatttatt acaggtcctt
     8941 tagcaagtca tctcgtattg aaagcagcgt ataacctcaa aacacccgct tctaaacgat
     9001 tgaagctgga tgaaattaaa gaagacatga aaggtacaaa attatagaga tagcgcatct
     9061 tgtctaatca atataaagaa acggcta
//
LOCUS       DANHPA010000099         9078 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.099, whole genome shotgun sequence.
ACCESSION   DANHPA010000099 DANHPA010000000
VERSION     DANHPA010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 9078)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9078)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9078
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.099"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            93..1718
                     /locus_tag="PTC28_001988"
     CDS             93..1718
                     /locus_tag="PTC28_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HDK5717236.1"
                     /translation="MHKNNKLMDWVVFIGTAIVLLMAVIPMMVFPEQSRAVVVAMNGF
                     VTSKMGAIYLVLGLAIFCFVLYIAFGKYGSVTLGRANDKPEFSDFAWASMLFCAGIGS
                     DILYWGVIEWAYYFQAPPHSAKPFSEEALNYATMYGMFHWGPIAWAIYVLPALPIAYL
                     VFVKKQPVFKISQACRPILKGQTDKALGKIVDILFIFGLIGGTATSLALGVPMISAGL
                     EKLFGFDGSSMVVKSIVLICITIVFAYSSYQGLKKGIQVLSDLNVWLSFILLGFIFVV
                     GPTIFIMETTVTGFGNMLKNFFQMATWLEPFGGIGGREETNFPQQWTIFYWSWWIVYA
                     PFIGLFIARISKGRTLKEVILGTIVYGTFGCVLFFGIFGNFAVYLQISGQFDVIQFLN
                     SHGTEATIIEVISQLPFSKIIIGLFILSAFLFLVTTFDSASYIVAAATQTRVKGEPIK
                     LNRLFWAFALCLLPFSLMLVGGEKALEILQTASIVAGVPLIVIFIIIMISFMMILGGD
                     RIALQSRADRFKRIERRSLRILRVGEDEEDDNL"
     gene            complement(2754..3305)
                     /locus_tag="PTC28_001989"
     CDS             complement(2754..3305)
                     /locus_tag="PTC28_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GbsR/MarR family transcriptional regulator"
                     /protein_id="HDK5717237.1"
                     /translation="MARAKTYEAKLEEAKDIVINSIAETMDLYGINRSVGNLYGIMLF
                     KESMTLDEMRQELQMSKPSMSAGVKKLQEFDIVKQRLTRGSRKQHFEAEKDFFEFFCN
                     FFTQKWNREISINLAALKESEAMIDEIIAADAVADAVKEEAVEIKAQLEDSRVYYYWL
                     ESITDALKSGKIFEYFPIPESKE"
     gene            3527..5020
                     /gene="betB"
                     /locus_tag="PTC28_001990"
     CDS             3527..5020
                     /gene="betB"
                     /locus_tag="PTC28_001990"
                     /EC_number="1.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="betaine-aldehyde dehydrogenase"
                     /protein_id="HDK5717238.1"
                     /translation="MEAVNRLSRRQYIDGEWVESSNKATREIINPYNQEVILEVAEGT
                     EADVERAILAARRAFDEGRYANETGETKGQKVRAIADKIKENREELAYLETLDTGKTY
                     EESLVDMDDIHNVFMYFAGLADKDGGELINSPIENTESKVVKEPIGVVTQITPWNYPL
                     LQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGVINLVLGAGSEIGD
                     VLSSHPEVDLVSFTGGIKTGKHIMKKAADHVTNIALELGGKNPNIIFDDADFDLAVDQ
                     ALNGGFFHAGQVCSAGSRIIVHNSIKDKFEKALIDAVKKIRLGNGFDKSTELGPLISA
                     EHRAKVENYMKVAKEDGATIAVGGQRPEREDLQNGFFFEPTVITDCDTSMRIVQEEVF
                     GPVVTVEGFETEEEAIRLANDSIYGLAGGVFTKDIGKAQRVAGKMRMGTVWINDFHPY
                     FAQAPWGGYKQSGIGRELGHQGLEEYLETKHILMNTNPEPVKWFSQS"
     gene            5148..6842
                     /gene="betA"
                     /locus_tag="PTC28_001991"
     CDS             5148..6842
                     /gene="betA"
                     /locus_tag="PTC28_001991"
                     /EC_number="1.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016426039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choline dehydrogenase"
                     /protein_id="HDK5717239.1"
                     /translation="MSKAYDKMYDYIIIGGGSAGSVLGARLSEDKDKKVLVLEAGRSD
                     YPWDLLIQMPAALMYPSGNRFYDWKYETDGEPHMGGRKVFHTRGKVLGGSSSINGMIY
                     QRGNPLDYEKWGQPEGMDTWDYAHCLPYFKRLETTFGADADDPIRGLNGPIKLRRGPA
                     DNPLFHAFFDAAVEAGYRKTKDVNGFRQEGFGPFDSQIHNGRRVSASRAYLRPAMKRP
                     NLTVKTRAFVEKLHFDGNTVTGVTYKRNGRLHKVLAKEVILSGGAFNTPQLLQLSGIG
                     DSEHLRSLGIEPRIHLPGVGENFEDHLEVYIQHTCKEPVSMQPSLNKLKMPFIGLEWL
                     TRRTGAAASNHFEGGGFVRSNDEVDYPNLMFHFLPLAVRYDGQKAETAHGYQVHVGPM
                     YSNSRGSLKITSTNPYVKPKFVFNYLSTEEDKREWVEAIRVARNILKQPALDQFNGGE
                     ISPGPSVQTDEEILDWVRRDAETALHPSCSAKMGPASDPMAVVDPLTMKVHGMENLRV
                     VDASVMPTTTNGNIHSPVLMLAEKAADIIRGRQPLEPEYVDYYIHGKSHPDAGAID"
     gene            7192..8193
                     /gene="argF"
                     /locus_tag="PTC28_001992"
     CDS             7192..8193
                     /gene="argF"
                     /locus_tag="PTC28_001992"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002508858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDK5717240.1"
                     /translation="MKAFKGKSLLKTKDFDAEALMTLIDFSMALKHKKQHHLPHPFLK
                     GKNIALIFEKPSTRTRAAFSVAAHDLGAHVDYYEKGDIHLGVKESIADTAQVFGRMYD
                     GIEFRGYHQSDVEELSQHSGVPVWNGLTNEWHPTQMIADFMTIKEHFGALENRTLTYV
                     GDASNNVAHDLLVTGAILGVNIHIAAPENLQPHPDVQTIAHQYAEQSGGNIMITENVQ
                     QAVYHTDILYTDVWVSMGTDESEWGTRIENMLPYQINDTLLVQADNPDLIVMHCLPAF
                     HNLETTTSQKLYDQFGLEALEITDSVFNGPNSVVFEQAENRLHAIKAIMAATLGDLF"
     gene            8479..8751
                     /locus_tag="PTC28_001993"
     CDS             8479..8751
                     /locus_tag="PTC28_001993"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717241.1"
                     /translation="MYLFKQSVTGDGTETKDVLVKKNIFKCNPDTGRMNLIYNEHVEL
                     VEVPIKPRDHLKARDLLDKFHSLYTEKLDVNLATTTFIEDIPLKEQ"
BASE COUNT         2892 a         1639 c         1901 g         2646 t
ORIGIN      
        1 atttaatttt cgataaccta ttgcttgtat caagacgtta agcatcaaga atcaacagaa
       61 aaggagttaa aaagaataag gggtgcttaa aattgcataa aaataataaa ttgatggatt
      121 gggtcgtgtt catcggtacg gcaatcgtat tattgatggc cgtcataccg atgatggtgt
      181 ttcctgaaca aagtcgcgca gtcgtcgtcg cgatgaatgg gttcgttaca tctaaaatgg
      241 gcgccatcta tctcgtattg ggacttgcga ttttttgttt tgtattatac atagcttttg
      301 gtaaatatgg ttcggtcact ttaggtcgtg ccaatgacaa gccagaattt agtgactttg
      361 cgtgggcttc gatgctgttt tgcgcaggta tcggttcaga tattttgtac tggggtgtca
      421 ttgagtgggc ttattatttt caagcgccac cacacagtgc gaaacccttt tctgaggaag
      481 ctttaaacta tgcgacaatg tatgggatgt ttcattgggg acctatagca tgggcgattt
      541 acgttttgcc agcattaccg atcgcatatt tagtattcgt caaaaagcaa ccggttttca
      601 aaattagcca agcttgtcgt ccgattttaa aagggcagac agataaagca ttaggtaaaa
      661 ttgtagatat tttattcatt ttcggactca ttggcggtac agcgacgtca ctcgcattag
      721 gtgtaccaat gatttctgca ggtcttgaaa agttattcgg ttttgacggg tcaagtatgg
      781 tcgtcaaaag tattgtgtta atttgtatca cgattgtatt tgcctatagt tcgtaccaag
      841 gtttgaaaaa agggattcaa gtgttaagtg acttgaatgt ctggttatca tttattttat
      901 taggctttat ctttgtcgtt ggtccgacta ttttcattat ggaaacaaca gtgacaggct
      961 ttgggaacat gttgaaaaac tttttccaaa tggcaacatg gctcgaacca ttcggtggta
     1021 tcggaggacg tgaagagacg aacttcccac aacaatggac gatattctat tggtcatggt
     1081 ggatagttta cgcgccattt atcggtttat tcattgcgcg tatttcaaaa ggacgtacat
     1141 tgaaagaggt cattttaggt acgattgttt acgggacatt cggatgtgtt ctattcttcg
     1201 gtatttttgg taacttcgcc gtgtatttac aaatctcagg tcaattcgat gtcatccaat
     1261 ttttaaattc acacggtacg gaagcgacaa tcatcgaagt cattagtcaa ctgccattct
     1321 caaaaatcat tatcggactg ttcatcttgt cggcgttctt attcttagtc acaacatttg
     1381 actcagcatc atacattgtt gcggcagcta cgcaaacacg cgttaaaggg gaacctatta
     1441 agctaaatcg tctattttgg gcatttgcgc tttgtttact tccgttttca ctcatgttag
     1501 tcggtggaga aaaagcatta gaaatcttac aaactgcttc tatcgttgca ggtgtaccac
     1561 tgattgtcat ctttatcatc atcatgattt cctttatgat gattttaggt ggagaccgca
     1621 ttgccttaca aagccgtgcc gatcgcttta agcgcatcga acgtcgctca ctaagaattt
     1681 tacgtgtcgg tgaagacgaa gaagacgaca atttataacg atacaaaata atggtgtagg
     1741 acagaaacca caacgtcgag gtcttaatgt tctacaccat ttttatatga ttttcaataa
     1801 acattgttat ttggaactta ttcataaatc aggattggtc taataattgt taggctgttg
     1861 tgaattgaaa acttttttgt gagaatgagt agggtggaat taattcgtaa ggtgaacata
     1921 tatgcatttt tataatgatt tttaaagaag catcatacat cagccaaagt gaaattttag
     1981 tacttttaat gggagggaaa tctgagtatc atcaattgca taaaacatag aagcctatta
     2041 gccatatgtc aatcattctc acctatgaaa tttataatga tatgaggtga tagcatatga
     2101 caatcataat caatttagat gtttatatac caatatcttt gacgatgatg ggtactttat
     2161 gcatgaccat tgttttgtat aaaaagtcaa aaaaataggc tcccgttaca ccactaacga
     2221 gagcacctaa tcataggcta taatgattaa catacgttga gttaccagct cactaatatg
     2281 ttactatgtt tttgcaccta gctcaagttt agcgacgaac taggtgtttt ttgataatca
     2341 aattatagca ccacgataaa gaaaagacaa cactttttaa atgccagtca gaatgctcac
     2401 tatacccact ctcaaatcgg gtcgagaaga agaggaaaag gttttataga agtattttat
     2461 ccatctccca aagtcgaagt gatgtaagtt tataagtact gatagaaaat aaagcttgct
     2521 cacaccccag attgcaagaa agcccgagac tcccgaggga tcagccgcag tcgaaaatcc
     2581 gctaacgctt cacctatgta tcatttaatc aagcgttagc tagttgagac aaggcctctg
     2641 ggaacgcgag ggcaaattct gcaatcggtc tgagattgct atccaatgca tattttctat
     2701 acaaaaaagc tttatgcatg tcattcaaac cacatcgcat aaagccctta tcatcattcc
     2761 ttcgactccg gaatcggaaa atattcaaaa atcttcccac tcttcaacgc atcagtaatc
     2821 gactcaagcc aataataata cacacgagaa tcttccaact gcgccttaat ctcaacagcc
     2881 tcttctttca ccgcatccgc cacagcatct gccgcaataa tctcatcaat cattgcctca
     2941 gactctttca acgcagccaa attaatcgaa atttcacgat tccatttttg cgtgaaaaaa
     3001 ttacagaaaa actcaaagaa atctttctca gcctcaaaat gttgtttacg actgccgcgt
     3061 gttaggcgtt gcttcacaat atcaaactct tgcaactttt tcacacccgc gctcatactc
     3121 ggcttactca tctgtaactc ttggcgcatt tcatcgagtg tcatactttc tttaaaaagc
     3181 ataatgccat acaaatttcc aacgctacga ttaatgccat aaaggtccat cgtctcagcg
     3241 atagaattaa tgacaatatc tttcgcttct tctaatttgg cttcatatgt ttttgcacgt
     3301 gccataatga cgacacctcc tatcatcata aaacatttta acatttaact tgagaaaagc
     3361 gagttattaa ttaaaaaaat ttgtaacatt ctttatcaat ttaacgcttt ttgtaggaag
     3421 gtgtaaagca atcgctagca gttgacagtg tcatttttca tatgttaaag ttaaatttgt
     3481 gaaattcgtt aaataaaaac ttaacaaact taacggaggg atactgatgg aagctgtaaa
     3541 ccgattatct cgtcgccaat atatagacgg tgaatgggtc gagagtagta ataaagcaac
     3601 acgtgaaatc attaatccgt acaatcaaga ggtcatttta gaggtggcag aaggaactga
     3661 agcagatgtt gaacgtgcta tccttgcagc tcgtcgcgca tttgatgaag ggcgttatgc
     3721 gaacgaaacg ggtgaaacga aaggccaaaa agtgcgtgcg attgcggaca aaattaaaga
     3781 aaaccgtgaa gagttagctt atttagaaac attagataca ggtaaaacgt atgaagagtc
     3841 attagttgac atggatgaca ttcataacgt gtttatgtat tttgcaggtt tagcagataa
     3901 agacggtggc gaattgatta actcaccgat tgaaaacaca gaaagcaaag ttgtgaaaga
     3961 gcccatcggt gttgtgacac aaatcacacc gtggaactat ccgctattac aagcatcatg
     4021 gaagattgcg cctgcattag cgacaggttg ttcccttgta atgaagccaa gtgaaatcac
     4081 acctttaacg accattcgtg tttttgaatt aatggaggaa gttggttttc caaagggtgt
     4141 catcaattta gttttaggtg caggttctga aattggcgat gttttatctt cacaccctga
     4201 agtggactta gtgtcattca caggtggtat taaaacaggt aaacacatta tgaaaaaagc
     4261 tgccgatcat gtgacaaaca tcgcgcttga attaggcggt aaaaatccaa atattatttt
     4321 tgatgatgca gactttgatc ttgcggtaga ccaagcgttg aatggtggct ttttccacgc
     4381 tggtcaagta tgttcagcag gttcacgtat tatcgttcac aattctatta aagacaaatt
     4441 cgaaaaagcg ttaatcgatg cggtgaaaaa aatccgctta ggtaacggtt ttgataagtc
     4501 gaccgaactc ggaccattga tttcagcaga acatcgtgcg aaagttgaaa attatatgaa
     4561 agtcgcgaaa gaagatggcg ctacgattgc ggttggcggt caacgcccag aacgtgaaga
     4621 cctacaaaat ggctttttct ttgagccaac tgtgattaca gattgtgata catcgatgcg
     4681 tatcgttcaa gaggaagtat ttggtcctgt tgtgacagtg gaaggctttg agacagaaga
     4741 agaagcgatt cgtttagcga acgactctat ttacggtctt gcgggtggtg tttttacgaa
     4801 agatatcggt aaagcccaac gcgtcgcagg caaaatgaga atgggtaccg tttggattaa
     4861 tgacttccat ccttatttcg cacaagcccc atggggtggt tacaaacaat caggtatcgg
     4921 ccgtgaactc gggcatcaag gtttagaaga atatttagaa acgaaacata ttttaatgaa
     4981 tactaaccct gaaccagtga aatggtttag ccaatcttaa tacacgaatg ttgaacagat
     5041 tgacgaagaa ggtcatgatt aacatcacgt cccgacaacc acgacagttc atgacttttt
     5101 gtacataaaa agatgagaaa atataaagtt gtggaggagt ttttgttatg agtaaagcgt
     5161 acgataaaat gtatgactat atcattatcg gtggcggtag tgcagggtcc gttttaggtg
     5221 cacgtttaag cgaagacaaa gataaaaagg tgttggtcct agaagcagga cgtagtgact
     5281 acccatggga cttattaatt caaatgcctg ccgctttaat gtatccatct ggcaatcgtt
     5341 tctatgactg gaaatatgaa acagacggtg aaccgcatat gggtggccgt aaagtattcc
     5401 acacacgtgg gaaagtgtta ggtggttcaa gttcaattaa cggtatgatt tatcaacggg
     5461 gtaatccgtt agactatgaa aaatgggggc aacctgaagg catggacaca tgggattatg
     5521 cacactgtct accttacttc aaacgtttag agacgacatt cggcgcagat gctgatgatc
     5581 cgattcgtgg cttaaatggc ccgattaaac tacgtcgagg tccagctgat aacccactat
     5641 tccacgcctt tttcgatgcg gcagttgaag caggttatcg caaaacaaaa gacgtgaatg
     5701 gtttccgtca agaaggtttt ggtccatttg acagccaaat tcataacggt cgtcgtgtat
     5761 cagcttcacg tgcgtattta cgcccagcca tgaaacgccc gaatttaacg gtaaaaacac
     5821 gcgcatttgt agaaaagctt catttcgatg gtaatacggt tacaggtgtg acatataaac
     5881 gtaacggccg tttacacaaa gtgctcgcga aagaagtgat tttatctggc ggtgcattca
     5941 atacaccaca attattacaa ctgtcaggta ttggtgattc agaacattta cgttcactgg
     6001 gtatcgaacc gcgtattcac ctaccaggtg tgggtgaaaa ctttgaagac catttagaag
     6061 tttacatcca acatacatgt aaagaacctg tatcgatgca accaagtcta aataaactaa
     6121 aaatgccgtt catcggttta gaatggctta cacgccgtac aggtgccgcg gcaagtaacc
     6181 actttgaagg tggcggcttc gtgcgctcaa atgatgaagt agattatcca aacttaatgt
     6241 tccacttctt accattagct gtacgttacg acggtcaaaa agcagaaact gcacatggct
     6301 atcaagtaca cgttggtccg atgtattcta actcacgtgg tagtttgaaa attacgtcaa
     6361 cgaaccctta tgtgaagccg aaattcgtgt ttaactactt atcaacagaa gaagataaac
     6421 gtgaatgggt tgaagccatt cgtgtcgcac gtaacatttt aaaacaacct gcattagacc
     6481 aatttaacgg tggcgaaatt tcaccaggac caagtgtaca aacagatgaa gaaattttag
     6541 actgggtacg tcgtgatgcg gaaacagcat tacacccatc atgtagtgcg aaaatgggac
     6601 cagcgagcga tccaatggca gtggtagacc cattaacaat gaaagttcat ggtatggaaa
     6661 acttacgtgt tgtggatgca tctgtaatgc caactacgac aaatggtaat attcattcac
     6721 ctgtattgat gttggcggaa aaagcagctg acatcatccg tggtagacaa ccattagaac
     6781 ctgaatatgt agattattat attcatggta agagtcatcc agatgcaggt gcgattgatt
     6841 aagagatgat cataatagcg attgattttg agattgttgc gacgatttca agatcagttg
     6901 cttttttatg taggaaacga aaaagaggat taaacatttt cagtttcttc tattgtaaaa
     6961 gcaataatct caaaactatc gtattttatg gttgaatata tgaggtataa gattctgctt
     7021 tttgggataa tcttttcaga gcgcttaaat ttcaatcgct aatactaacg cttctgatac
     7081 agaaaagcgg ttgacttaga gttgttctaa atgtataata attcaatata aagaataaat
     7141 aatcataaaa ggtgtgatga agatgggacg tacacgacta ctttaaagaa actgaaggct
     7201 ttcaaaggga aaagtttatt gaaaacaaag gattttgatg ctgaggcttt aatgacgtta
     7261 attgactttt cgatggcgtt aaaacataag aagcagcatc acttgccaca tccgtttttg
     7321 aaagggaaaa acattgcgct tatttttgaa aagccctcta cacgaacaag agcagcattc
     7381 agcgtagcgg cgcatgattt aggtgcacat gtggattatt atgaaaaagg ggatattcat
     7441 ctaggggtca aagaatcgat tgccgataca gcgcaagttt tcggacgtat gtatgatggt
     7501 atcgagtttc gtggctacca ccagtcagat gtagaagagt taagtcaaca ttcgggtgtg
     7561 cctgtatgga atggtttgac gaatgaatgg catccgacac aaatgattgc agactttatg
     7621 actatcaaag aacattttgg cgcattagaa aatcgcacat taacgtatgt cggtgatgcg
     7681 tcaaacaatg tggcacatga tttacttgtg acaggggcaa tattaggcgt caatattcat
     7741 atcgccgcac cagaaaattt acaaccacat cctgatgttc aaaccattgc ccaccagtat
     7801 gcagagcaat caggcgggaa tatcatgatt actgaaaatg tccaacaagc cgtctatcat
     7861 acggatatac tctatacaga cgtctgggta tcgatgggga cagatgaaag tgagtggggc
     7921 acacgcatcg aaaacatgtt gccttatcaa attaatgata cgcttcttgt tcaagcagac
     7981 aacccagacc tcatcgtcat gcattgttta ccagcgtttc ataacttaga aacgaccacg
     8041 agtcaaaaac tttatgacca gttcggatta gaagctttag agattacaga ttcagtgttc
     8101 aacggcccaa actctgttgt ctttgaacaa gcagaaaacc gtttgcatgc aatcaaagcg
     8161 attatggctg caacactcgg cgacctgttt tagataaaag gaacaataaa aaacccaatc
     8221 cgatgtattg aaccgcattg gattgggttt taatcgtatt taaaaaagtt atgaatgaac
     8281 gtacgtaact acaaagacat cagcaaagtt ttagattgtt cctcagaatc tgtaagacta
     8341 cggtttggaa gttgttagat aaagcgatgg aggtactaga ataaattatc gcttaaaaaa
     8401 gtacgtttta cgaatgagta cattaaaagt gaaaaaaaat aaggttatgg gtgatgtgat
     8461 tttatcagct aaaaaatatt gtatctattt aagcaatcag taacaggtga tgggactgaa
     8521 acgaaagatg tattagtgaa gaaaaatata tttaaatgca atccagacac tggacgtatg
     8581 aaccttattt acaatgaaca cgttgagtta gtagaagtgc ctattaagcc acgtgaccat
     8641 ttaaaggcac gagatttgtt agataagttt catagtttgt atacagagaa gttggatgta
     8701 aatctagcca cgacgacatt tatagaagat attccgttga aagagcaata aatatattaa
     8761 tattactgtg gttttggagt aaaaggaaaa aagctactgt ttgtgtagct ttcaagtatt
     8821 gttggccaaa aatattatta gcagttccac aattactaat agcaaaaagt tcccaaaaag
     8881 gtacagctcc tcaagaaaaa gtcatgcaaa aaattattga aataatcatt ttaattattg
     8941 atgttataga caaaagtctc cgagcgatag atattgttaa gcaaaaaaga ataattgttg
     9001 tcctataatt tgcatagtag aacttaaata gccatccact aaaagattac tcccgtaggc
     9061 tatataaaac ttaaagta
//
LOCUS       DANHPA010000100         8874 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.100, whole genome shotgun sequence.
ACCESSION   DANHPA010000100 DANHPA010000000
VERSION     DANHPA010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 8874)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8874)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8874
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.100"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..216)
                     /locus_tag="PTC28_001994"
     CDS             complement(<1..216)
                     /locus_tag="PTC28_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1033 family protein"
                     /protein_id="HDK5717242.1"
                     /translation="MWEVAKIRADYEGWWLFDDWPEHIIDSQKFETFEAFEQAYQHMI
                     QQAKTDYDNFIVGKHNIYAFYNNCDLNF"
     gene            375..647
                     /locus_tag="PTC28_001995"
     CDS             375..647
                     /locus_tag="PTC28_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HDK5717243.1"
                     /translation="MKHYLIRVYGRVQGVGFRYFTERLALKYQIKGTVKNVEDYVEVH
                     AQGDDASLESFTQGVINGASPASRVETYTIDELEINEPYQNFRAIS"
     gene            660..1298
                     /locus_tag="PTC28_001996"
     CDS             660..1298
                     /locus_tag="PTC28_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-bromo-4-chloroindolyl phosphate hydrolysis
                     family protein"
                     /protein_id="HDK5717244.1"
                     /translation="MRYLLSRVWGAVVGVPVAVIAFFTSAILDFTFLIDFVIGIAGFV
                     VGYVPTQRLTSRAYLKEMNLTRKDYHYIMHQINLVQNKNKRILKSFIKVRSIQDFKLV
                     NDIYRLSRTINSAIKQRPFQFFNIESFYYSHIDNALNLIESYTRLAKMPLKADNERQM
                     LQQTRITLEEVKRTLIADLKQVNAQDYEQLDTEMRLNEMYQRRHVKEMENDS"
     gene            1295..2461
                     /locus_tag="PTC28_001997"
     CDS             1295..2461
                     /locus_tag="PTC28_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic anion resistance protein"
                     /protein_id="HDK5717245.1"
                     /translation="MKSNDLTNATSTHPLDAYFNDYDHPKTATVTEVETKELNEHFND
                     QDRQKVQSLADQIEPLNRDSLLKFGSNAQTHLSHFSHQMLDEIQSKDVGPIGETLEQL
                     MKKLKEVNPDELSQQNDNFLKKLFKRSKNSMQQLFSRMQSVSAQVDRISIELDKNKAL
                     LVKDIQLLDGLYQQNKDYFDVLNLYIAAAEQKKSEIEQHVLPEIRQRVKAADDQMVVQ
                     DVADMEQFVDRLEKRIYDLKLSRQISLQSAPQIRMIQNVNQALAEKIQSSILTSIPLW
                     KNQMAIALTLQRQQKAATAQKQVTDTTNEILLRNSEMLRQNARVTAEENERGIVDIET
                     LKTTQDNIIQTIEETLQIQQEGREKRQQAEKDLLALESDLKARLTTAKDQRDRQ"
     gene            complement(2507..2911)
                     /locus_tag="PTC28_001998"
                     /pseudo
     CDS             complement(2507..2911)
                     /locus_tag="PTC28_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165342.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
     gene            complement(2927..3124)
                     /locus_tag="PTC28_001999"
     CDS             complement(2927..3124)
                     /locus_tag="PTC28_001999"
                     /inference="COORDINATES: protein motif:HMM:NF014126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HDK5717246.1"
                     /translation="MKFIVFLSLFLIFSLIGKLCLGKPDEPEFKTISWLAMLFSTGDG
                     SLFLRHHRTDDTRFNATECET"
     gene            complement(3268..4614)
                     /gene="brnQ"
                     /locus_tag="PTC28_002000"
     CDS             complement(3268..4614)
                     /gene="brnQ"
                     /locus_tag="PTC28_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011303123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HDK5717247.1"
                     /translation="MNKNTLFIGFMLFAIFFGAGNLIFPPNLGLESGQFFWPSILAFV
                     ITGIGLPLMGVMVGALDKQGYIGSINKIHPVFSVVFLVSIYLTIGPLFAIPRTASTSF
                     EMTVTPIIHSSSPVWLFVFSVIYFLIVLYLCLNPGKIVDRIGAILTPLLLITIIAMII
                     KGFVDFGGSTQNTANPEVYTSVLGGFSKGFTEGYLTMDAIAAIAFSMIVVNAIKATGI
                     KHANDIFKQTAMAGIIAAIALAVIYISLGFIGNHIIIPEETMKKLVENDQNIGAYLLI
                     TMADTGFGSFGKYLLGIIVALACLTTACGLIVSVSEYFNSILPKISYKVYVFIFTIIS
                     FILSNLGLNAVIKLSIPVLLIVYPIAITTVMLILIARLVPTRPITQQMTVAVVTIESI
                     LSVINANGWSKIGFINQLPLHEHSLEWFPIAVITMIIGYIIGAFMKNSDIIVYEKE"
     gene            complement(4733..6622)
                     /locus_tag="PTC28_002001"
     CDS             complement(4733..6622)
                     /locus_tag="PTC28_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HDK5717248.1"
                     /translation="MSDRFIMFNDEQLDAMKMMMLQDLARLLLKNPNTQVKVHKFPYY
                     DAINDEVICSSFWAHRPEYVEHTGLKTDVLLATYSYFHMDPQIVNKVVANEEGFNHPK
                     LYRQLFKMMEEMRILNLIERERPRTQKLIQLRKQTRQQYSASQMNVYQTKTLFTDLFF
                     LNLEYSFLRDDFYTIPHIHPDFQPTLEFIYQYLPDAFQLQSSEETMYLTQRIMYQVDD
                     WLEEDMLNEYYHIPRHVYEALCQFTLEDLKRIDAANTDQHNGEKEDDVETEKIESKNI
                     DSESAGGAYLEMELHEGENSDVLGDDSAREGDSTDDMTDMMSKKGKGSNDTLDDQEGG
                     EQGPSNALLSLKGINQYVDIKWHVPDILPEYIESYRQVQTSVQFEIKDLIQIIKKTID
                     REYQDVRANLTKGRLQRNLVNWFIDDQYKLFYKKADQSRTFDATFTLLIDASASMHDK
                     MDETIKGVVLFHETLKALNVKHEILAFNEDAFDADAQYQPNIIDEIINYHQSTFNTEA
                     PRIMSLTPQDDNRDGVAIRVASDRLLSRSEQQRFLIVFSDGEPSAFNYSQDGILDTYE
                     AVENSRKLGIEVFNVFLSQESITESTEQTIHNIYGQYAIFVEGVEHLPSLLSPLLKKL
                     LLKSF"
     gene            complement(6634..7431)
                     /locus_tag="PTC28_002002"
     CDS             complement(6634..7431)
                     /locus_tag="PTC28_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001831311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HDK5717249.1"
                     /translation="MVKEFTGYINSDETVLGDAIKLFELNKNILLKGPTGSGKTRLAE
                     TLSEMTELPMHQINCSVDLDAESLLGFKTIKTSDEGHQEIVFIDGPVIRAMREGHILY
                     IDEINMAKPETLPFLNGVLDYRRQLTNPFTGEVIKAAPGFKVIAAINEGYVGTLPMNE
                     ALKNRFVVINVNYIDGQTLHDVIKAQSLLQDDSLIDQIIKFNADLRTMTQQGQLSEEA
                     ASIRALIDMSDLATVMPIERAIQRSIIDKLEDEREQQAIMNAVELNF"
     gene            complement(7529..7732)
                     /locus_tag="PTC28_002003"
     CDS             complement(7529..7732)
                     /locus_tag="PTC28_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499941.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717250.1"
                     /translation="MLHETWKTRTPLKKVKVVHTDAKKFTVSDMLTVGETYDVVNETE
                     EYYQIIDNSGHVGGYYKTYFEEV"
     gene            complement(7736..8560)
                     /locus_tag="PTC28_002004"
     CDS             complement(7736..8560)
                     /locus_tag="PTC28_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDK5717251.1"
                     /translation="MAQFRSVTLGTKSIDKTIDLFHNMLGMAYDRKGNRVQFGDAQLS
                     PGTRLQFVEIAESIKPKHQHFESVALRTPSNHGIDEYMAILQEHQYAFEGPAQLNGHQ
                     RLQFSDANDQHFNIFSDEANVGVGLGMPSEESSVSPLHQVQGLGPVMLRTQEPAVTMT
                     LLSNLFGFKPIAEYTSPQANQSVVVMEGEGGGLGAEVHIYQSDTIQIPPYGIVDQLEF
                     TAQHEAEFNDALNQLTHHDIPFQQLKNDQHETRSIRVNDMSGLALILTLAHATKGS"
     gene            complement(8625..8864)
                     /locus_tag="PTC28_002005"
     CDS             complement(8625..8864)
                     /locus_tag="PTC28_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717252.1"
                     /translation="MNHALIYILIVIGIANIIAQFGFIIASLFGFMHYYPIFQLLGTS
                     LLVLFAIDHLKFNHSKSIYLILGLALITSGVLIKL"
BASE COUNT         2916 a         1672 c         1568 g         2718 t
ORIGIN      
        1 aaaattcaaa tcacaattat tataaaatgc ataaatgtta tgtttgccaa caataaaatt
       61 gtcataatcc gtttttgctt gttgaatcat gtgttgatac gcttgttcaa atgcttcaaa
      121 tgtctcaaat ttttgcgaat caatgatgtg ttctggccaa tcatcgaata accaccaacc
      181 ttcatagtct gcacgaatct tagcaacttc ccacataacc aacgtccccc tatatgtaaa
      241 aaaagtctta ctaaaaaaga tagtatcttt aaatttaaaa agcaagctaa aagacctaaa
      301 aataagagat atgaaactta aatattagtc ttttgcacta aaaatactta taattgagta
      361 gaggggtgaa atgtatgaaa cattatttaa tccgagtata cggacgtgtt caaggggttg
      421 gatttcgtta tttcactgaa cgattagctt tgaagtatca aatcaaaggt acagtgaaaa
      481 atgttgaaga ttatgtagag gtgcacgcac aaggcgatga cgcgtcactt gaatctttta
      541 cacaaggagt cattaatggc gcctccccgg cttcacgtgt tgaaacttat acaatagatg
      601 aacttgaaat taacgaacca tatcaaaact ttagagcgat ttcataaagg aagatgaata
      661 tgaggtattt attatcgagg gtttggggtg ccgtagttgg agtacctgtt gcagttatcg
      721 ccttttttac aagtgccatt ttagatttta catttttaat agatttcgtc atcggcatcg
      781 caggttttgt agtcggttat gtacctactc agcgtttgac gtcacgtgcc tatttgaaag
      841 aaatgaattt gacacgtaaa gactatcact atattatgca tcaaattaac ttagttcaaa
      901 ataaaaataa acgtatttta aagtcgttta ttaaagttag atcaatacaa gattttaagt
      961 tagtgaatga tatttaccga ttatcgcgta caattaattc agccattaag caacgacctt
     1021 ttcagttttt taatattgaa agcttttatt attcacatat tgataatgcg ttgaacttaa
     1081 ttgaaagtta tacgcggctt gctaaaatgc cacttaaagc agacaacgag cggcaaatgc
     1141 tacaacaaac acggattact ttagaagaag tgaagcgtac actcattgca gatttaaagc
     1201 aagttaatgc gcaagattat gagcagttag atactgaaat gcgactcaat gaaatgtacc
     1261 aaagaagaca tgttaaagaa atggagaatg attcatgaag tcaaatgatc tcacgaatgc
     1321 aacaagtaca catccattag atgcttattt taatgattat gatcatccaa aaacagcaac
     1381 agtgacggaa gtagaaacaa aagaattaaa cgaacatttt aacgatcaag accgtcaaaa
     1441 agttcaaagt ttagcagatc aaatcgaacc attaaatcgt gatagcctat tgaaattcgg
     1501 ctcaaatgca caaacacatc tttctcattt ttcgcatcaa atgttagatg aaattcagtc
     1561 gaaagatgtg ggaccgattg gtgagacttt ggaacagttg atgaaaaagt tgaaagaagt
     1621 gaatccggat gaactttctc aacaaaatga taatttcctc aaaaaattat tcaaacgctc
     1681 caaaaattcg atgcaacaac ttttttctcg aatgcaatct gtgagcgcac aagtcgatcg
     1741 tatttcaata gaactagata agaataaagc attgttagtg aaagatattc aactattgga
     1801 tggcttgtat caacaaaata aagactattt tgatgtgttg aatctttata ttgcagctgc
     1861 agaacaaaag aaatcggaaa ttgaacaaca tgtgttacca gagatacgtc agcgagtgaa
     1921 agctgctgat gaccaaatgg tggtccaaga tgttgcggat atggagcagt ttgtcgatcg
     1981 tcttgaaaaa cgaatttatg atttgaaatt atcacgccaa atttcattac aatctgcacc
     2041 gcaaatccga atgattcaaa atgtaaacca agcattagct gaaaaaattc aaagttcgat
     2101 tttaacaagt attccattgt ggaaaaatca aatggcgatt gcattaacat tgcaacgtca
     2161 acaaaaggca gcgacagcac aaaagcaagt tacggatacg acgaatgaaa ttttattacg
     2221 taattctgaa atgttacgtc aaaatgcgcg tgttactgca gaagaaaacg agcgtggtat
     2281 agtcgatatt gaaacattga agacgacaca agataatatt attcaaacga ttgaagaaac
     2341 attacaaatt caacaagaag gtcgtgaaaa gcgccaacag gctgagaaag atttacttgc
     2401 attagaatca gatttaaaag cgcgtttaac tacagcgaaa gaccagcgcg acagacagta
     2461 gagaaacata aaaacaggct cggatattgt gttaccgagc ctgtttttat gtttctttgc
     2521 gatcaagttt atcattttta gcttttctcg attcaacgat atattcacgc attctctctt
     2581 tatctggtgt cagtgttaag ctgagatgac gttgttctaa atgagcgtct ttataaaatg
     2641 aaacgagcat cagtataatg acgacgttaa agggtaacgc tgaaataatc gccgctcatt
     2701 gtaatgcgcc taagccttct ccaccattta ataataataa agcgaatgcg atcagtgaga
     2761 gcaataagcc cccaatgact tttacgcgtc ctgtaggtgt caaagaatca tgtgatgttt
     2821 gcatgccgag tatgaaagtg gctgaatcgt cagaaataat taaaaatgta cctacgagta
     2881 acatggtaat gacagataat ataggtacca tatcgcagca tttgcttcaa gtttcgcatt
     2941 cagtggcgtt aaatcgagtg tcatcggttc ggtgatgccg taaaaaaaga gacccatccc
     3001 ctgtactgaa taacatcgcg agccaagata tcgttttaaa ctccggctca tcgggctttc
     3061 ctaaacacaa cttccctatt agactaaaaa taagaaagag actgagaaac acaataaact
     3121 tcatttacaa accattgggc ttaattgaat aggtcttaag ttagtgggac aaaaatgtgg
     3181 tgattacata ttaaaaagca aagtttaaag aggtagcaaa caagacaagc cacagaaatg
     3241 cgacttgtct tgttcatgat attaagctta ttctttttcg tacacgatga tatcagagtt
     3301 tttcataaat gcgccaatga tgtaaccaat aatcattgta atgacagcga ttgggaacca
     3361 ctctaatgaa tgttcgtgta atggcaattg attgataaaa ccaattttcg accaaccatt
     3421 tgcattgatg acacttagaa tggattcaat cgttacaact gcaacagtca tttgttgcgt
     3481 aatcggacgt gtcggtacaa ggcgtgcgat taaaattaac attactgttg taatagcgat
     3541 tggataaacg atcaataata ctggaattga aagtttaatc actgcgttta aacctaagtt
     3601 cgataaaata aagctaatga ttgtaaagat aaagacataa actttatatg aaattttcgg
     3661 taagatgctg ttgaaatatt cacttactga cacgatcaaa ccacacgctg tcgttaaaca
     3721 agctagtgct acgataatac cgagtaaata tttaccaaat gaaccaaagc ctgtatctgc
     3781 catcgtaatg agcaagtaag caccaatgtt ttggtcattt tcaactaatt ttttcattgt
     3841 ttcttcaggg atgattatgt ggttaccaat gaagcccaaa gaaatgtaaa tgactgctaa
     3901 agcgatggca gcaatgatac ctgccattgc agtttgtttg aaaatatcat ttgcgtgttt
     3961 aatgcctgtc gctttaattg catttacaac aatcattgaa aacgcaattg ccgcaatcgc
     4021 atccatcgtt aaatagcctt cagtgaaacc tttagaaaag ccacctaaca cagaagtgta
     4081 tacttcaggg tttgcagtgt tttgtgtgct acctccaaaa tctacaaaac ctttaataat
     4141 catcgcaata atcgtgatta aaagcagtgg tgttaaaatg gcaccgatac ggtcaacgat
     4201 tttgccaggg ttcaaacata agtacaacac gattaagaaa tagatcactg agaaaacaaa
     4261 taaccaaacg ggactactcg aatgaatgat cggtgtcact gtcatctcga aagacgttga
     4321 tgctgtacgt ggaatggcaa ataacggtcc aatcgttaaa taaatcgaaa ctaaaaatac
     4381 aactgagaaa acgggatgta ttttgttgat cgaaccaatg taaccttgtt tatctaaagc
     4441 acctaccatc acgcccatta atggtaaacc aatacccgta atgacaaaag ctaaaattga
     4501 cggccaaaag aattgtccac tttctagtcc taaatttggt gggaaaatca agttccctgc
     4561 gccaaagaag atggcaaata acataaaccc aataaataaa gtgtttttat tcataatgct
     4621 gctccttaaa attcctaaat aaatatgatt cattctatca caagaacccg tagccgtcta
     4681 taaaatttct gaaaatttga aaattgttgt tacataatag gcaaaaaaaa gactaaaatg
     4741 acttcaataa taactttttc agtaatggtg aaagtaagct tggcaaatgt tcgacacctt
     4801 caacaaagat ggcatattgt ccataaatgt tatggatcgt ttgttcggtc gattcagtaa
     4861 tggattcttg acttaaaaag acattgaaca cttcgatgcc gagtttacgt gagttttcaa
     4921 cagcctcata cgtatctaaa atgccgtctt gactatagtt aaacgcagaa ggttcaccat
     4981 ccgaaaagac aataagaaaa cgctgttgtt ctgaacgaga caataaacga tcacttgcca
     5041 cccgaattgc gaccccatca cgattatcgt cttgaggtgt gagtgacata attctcggtg
     5101 cttcggtatt gaaagttgac tgatggtaat taataatctc gtcaatgata ttcggttgat
     5161 attgtgcatc tgcatcaaaa gcatcttcat taaaagcaag tatttcatgc tttacattga
     5221 gtgctttcaa tgtttcatga aacaatacaa cgcctttaat ggtttcatcc attttgtcgt
     5281 gcatactcgc tgatgcgtcg attaataacg taaaagtagc gtcaaaagtt cggctttggt
     5341 cagctttttt ataaaataat ttatactgat catctataaa ccaattgacc aaattacgct
     5401 gcaaacgccc tttcgttaaa ttcgcacgca cgtcttgata ttcacgatcg attgtctttt
     5461 taataatttg aataaggtct ttgatttcaa attggaccga tgtttgaact tgacgataac
     5521 tttcaatata ttctggcaaa atatctggta catgccactt aatatctaca tattggttaa
     5581 tccctttaag gctcagtaat gcgtttgaag gcccttgttc gccaccttct tgatcatcta
     5641 acgtatcatt tgaacctttc ccctttttac tcatcatgtc tgtcatgtcg tcagtgctgt
     5701 caccttcacg tgcactatca tcacctagca catcactgtt ttcaccttca tgaagttcca
     5761 tttcgagata agcaccaccg gcagattcac tatcgatatt tttagattct attttttcag
     5821 tttcgacatc gtcctctttc tctccgttat gctgatccgt atttgcggca tcgatacgtt
     5881 tcaaatcttc aagtgtaaac tggcataatg cttcatagac gtgacgcggg atatgataat
     5941 actcgtttaa catatcttct tctaaccagt catccacttg atacataatc cgttgcgtta
     6001 aatacattgt ttcttcgctt gactgtaatt gaaacgcatc cggcaaatat tgataaatga
     6061 attcgagtgt cggctgaaaa tcaggatgaa tatgcgggat ggtataaaaa tcatctcgta
     6121 aaaatgaata ttctaaattt aaaaagaaca aatctgtaaa taatgttttc gtttgataca
     6181 cgttcatttg tgatgcactg tattgctgac gtgtttgctt acgaagttgg atcaattttt
     6241 gtgtacgtgg ccgttcgcgt tcaattaaat ttaaaatacg catctcttcc atcatcttaa
     6301 aaagttgacg atagagtttc ggatgattga atccctcctc attcgccacg actttattga
     6361 caatttgtgg atccatatga aaatagctat aagtcgccag taaaacgtct gtcttcagtc
     6421 cggtatgttc aacatattca ggtcgatggg cccaaaaaga actacaaata acctcatcat
     6481 tgatggcatc ataatatgga aatttatgga ctttgacttg tgtattcgga ttcttcaaca
     6541 ataggcgtgc taaatcttgt aacatcatca ttttcatggc atcgagttgt tcgtcgttaa
     6601 acatgataaa gcgatcgctc ataatatcac cttctaaaag ttaagttcta ccgcattcat
     6661 tatcgcttgt tgctcgcgtt catcttctaa tttatcaatg atactacgtt gaatcgcgcg
     6721 ttcaatcggc atcacagtcg ctaaatcgct catatcgatt aatgcacgaa tacttgctgc
     6781 ttcttcagac aattgacctt gttgtgtcat cgtacgtaaa tcagcattaa atttaataat
     6841 ttgatcaatt agtgaatcgt cttgcaataa actttgtgct ttgatgacat catgtaaagt
     6901 ttggccatca atataattta cattaatcac gacgaaacgg ttttttaacg cctcattcat
     6961 cggtagtgtc ccgacatagc cttcattaat ggctgctatg actttaaaac caggcgccgc
     7021 tttgataact tcacccgtaa atgggttggt caattgacga cgatagtcca acacaccatt
     7081 taaaaatggt aacgtttccg gtttcgccat attgatttcg tcgatgtata aaatatgacc
     7141 ttcacgcatc gcacgaatca ctggaccatc gataaaaaca atctcttgat ggccttcatc
     7201 tgatgtttta atcgttttaa agccgagtaa actttctgca tctaaatcaa cagaacagtt
     7261 aatttgatgc atcggtaatt cagtcatttc gcttaacgtt tcagctaatc tcgttttccc
     7321 tgacccagtt ggccctttta gtaaaatatt tttattcaat tcgaataact tgattgcatc
     7381 tcctagaaca gtctcatcgg agttgatata accagtaaat tccttaacca ttgtcatttt
     7441 cctttctatt taagtgcatg aaaaaagacg tgagtaccga gatacccccg cttttttaaa
     7501 ttctaaatcg ctataacgca agaaatactt atacttcttc aaaataagtt ttgtaataac
     7561 cgccaacgtg acctgagtta tcaataattt gatagtattc ttcagtttcg ttaacgacat
     7621 catatgtttc accaacagtt aacatatcgc tgacagtaaa tttctttgca tctgtatgaa
     7681 cgactttcac cttttttagt ggtgtacgcg ttttccaagt ttcatgtaac atagtttaac
     7741 ttcctttcgt tgcatgcgct aatgttaaaa tcaatgccaa accactcata tcattgacgc
     7801 gaatcgaacg cgtctcatgt tggtcatttt taagttgttg aaaagggata tcgtgatgtg
     7861 tcagttgatt caacgcatca ttaaattcgg cttcgtgttg tgctgtgaat tcgagttggt
     7921 caacgatgcc ataaggtgga atttgtatag tgtctgattg ataaatatga acttcagcac
     7981 ctaacccacc gccttcacct tccataacta cgacagattg atttgcttga ggtgaagtgt
     8041 attcagcaat aggtttaaag ccaaacaaat tacttaataa cgtcatcgtc acagcaggtt
     8101 cttgtgtacg caacatcact ggaccgagtc cttgtacttg atgtagcgga ctcacagaac
     8161 tctcttcact aggcattccc aatccaacac cgacattcgc ttcgtctgaa aaaatgttga
     8221 aatgttggtc attggcatca gaaaattgta gcctttgatg accattcaac tgtgcaggtc
     8281 cttcaaaagc atattggtgt tcttgtaaaa tggccatata ttcgtcaata ccatggttac
     8341 tcggtgtacg caatgccaca ctttcaaaat gttgatgctt cggtttaatc gattctgcta
     8401 tttcaacaaa ttgaaggcgc gtaccagggc taagttgtgc atctccaaat tgaacacgat
     8461 tgccctttct atcgtaggcc atacctaaca tattatggaa taaatcaatc gttttgtcta
     8521 tacttttagt gcccaatgtc acactgcgaa attgcgccat ttcatctcac tcctcttcac
     8581 attcattata acttaaatga actatcgaat cagagttgat gcctttataa ttttattagc
     8641 actcccgaag tgatcaatgc taaacccaaa atcaaatata tcgatttaga gtgattgaac
     8701 ttcaaatgat ctatcgcaaa tagcactaat aaagaggtac caagcaactg aaaaatcgga
     8761 taataatgca taaaaccaaa cagacttgcg ataatgaaac cgaattgcgc gatgatgttc
     8821 gcaataccaa tcacaattaa aatatatatg agcgcatgat tcatccgtaa cacc
//
LOCUS       DANHPA010000101         8869 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.101, whole genome shotgun sequence.
ACCESSION   DANHPA010000101 DANHPA010000000
VERSION     DANHPA010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 8869)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8869)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8869
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.101"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(569..2002)
                     /locus_tag="PTC28_002006"
     CDS             complement(569..2002)
                     /locus_tag="PTC28_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HDK5717253.1"
                     /translation="MRDQTKQYINGEWVESHSGETIAVINPATEEVFGHIAKGNKADV
                     DQAVQAAHDVYLSFRNSSVKERQDLLDRIVKEYENRKDDLIEAMTLELGAPVTQSEKV
                     HYQMGLNHFKAARDALNDFQFEERRGDNLIVKEAIGVAGLVTPWNFPTNQTSLKLAAA
                     FAAGSPVVLKPSELTPYAAIILAEIFDKVGVPKGVFNLVNGDGEGVGTPLTQHPDVRM
                     VSFTGSGGTGSKIMEAASKDFKKVSLELGGKSPFIILDDANLEEAAKAAVKKVVNNTG
                     QVCTAGTRTLVPESIKDDFLKEVKKQMANVKVGDPQNTETQMGPIVSEKQYNQVQDYI
                     QKGIDEGAELLYGGTGKPDGLDKGYFAKPTIFTNVNNQMTIAQEEIFGPVMSIITYKD
                     LDEAIEIANDTKYGLAGYVFGQNKENLIRVARSIEAGTIEINEAGRASDLPFGGYKQS
                     GIGREWGDFGIEEFLEVKSIAGYYKGE"
     gene            complement(2183..2512)
                     /locus_tag="PTC28_002007"
     CDS             complement(2183..2512)
                     /locus_tag="PTC28_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDK5717254.1"
                     /translation="MEVCPYLEETFKILGRSWNGLILHYLSTCDGYKAHFSEMKRHLR
                     PITNRALSMKVAELADAELLTKEVISTNPPSVCYHLTEKGVALARALEPLETWAHDYI
                     DLEEKAL"
     gene            complement(2560..3825)
                     /locus_tag="PTC28_002008"
     CDS             complement(2560..3825)
                     /locus_tag="PTC28_002008"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HDK5717255.1"
                     /translation="MAQEVIKIRGGQTLKGSVEINGAKNSSVAIIPATLMAEAPVTLD
                     GLPQISDVETLVSLLGDLNIKTELNGSTLVVDPTHIENAPLPNNKVESLRASYYMMGA
                     MLGRFKKCVIGLPGGCPLGPRPIDQHIKGFKALGATVDESSLTSMKIEAERLVGANIY
                     LDIVSVGATINIMLAATRAEGQTIIENAAKEPEVVDVANFLNSMGAKVTGAGTSSIKI
                     VGVPHLHGSRHSIIPDRIEAGTYMCIAAACGESVHIDNIIPKHMEALTVKLKELGVTI
                     ETGDDYMIVQSSAPYKSVDIKTLVYPGFATDLQQPITPLLFLANGPSFVTETIYPERF
                     RHVKELQKMNGLITADQNTATVKPSKLTGTEVYASDLRAGACLIVAGLLAEGVTTIYN
                     VKHIYRGYTDIVKTLKALGADIWTEQVKA"
     gene            complement(4170..5042)
                     /locus_tag="PTC28_002009"
     CDS             complement(4170..5042)
                     /locus_tag="PTC28_002009"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphate aldolase"
                     /protein_id="HDK5717256.1"
                     /translation="MPLVSMKEMLIDAKENGYAVGQYNLNNLEFTQAILQASQEENAP
                     VILGVSEGAARYMGGFYTVVKMVEGLLHDYEITIPVAIHLDHGSSFEKCKEAIDAGFT
                     SVMIDASHEPYEDNVKITKKVVEYAHERGVSVEAELGTVGGQEDDVVAEGVIYANPTE
                     CQNLVKATGIDALAPALGSVHGPYKGEPNLGFKEMEEIGASTGLPLVLHGGTGIPTHD
                     IKKAISFGTAKINVNTENQIASAKRVREVLDQDKEVYDPRKYLGPAREAIKETVIGKI
                     KEFGTSGKAANIKG"
     gene            5307..5831
                     /locus_tag="PTC28_002010"
     CDS             5307..5831
                     /locus_tag="PTC28_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2529 domain-containing protein"
                     /protein_id="HDK5717257.1"
                     /translation="MSKMLTTQLTGIFNRLDQQELDIQMAAQSLIQAMGGEGHVYIKG
                     YGDLKCFESYILTSFEKLHSSLALDDYPSFDVLDTTDRVLLFGAEYSEEMARDLEQLI
                     ADDRDVVVITNKPKEVELPDHLMHFINLSTPRPIVYTEDYDKVVQPHLMALNYVYYEI
                     YTQMVEMMRDLDLE"
     gene            complement(6256..7026)
                     /locus_tag="PTC28_002011"
                     /pseudo
     CDS             complement(6256..7026)
                     /locus_tag="PTC28_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498907.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            7183..8787
                     /locus_tag="PTC28_002012"
     CDS             7183..8787
                     /locus_tag="PTC28_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182-like element IS1182 family transposase"
                     /protein_id="HDK5717258.1"
                     /translation="MYQNYTINQLCLPIDLEIKLEENDFAHAIVQFVDSIPDEVFLPY
                     YQSMGRPQYHPRMLLSIILCAYIQGVYSGRQIQNMLIDSIRMRYLSQEQFPNFRTINR
                     FRVHPIMNDILDHSFVQFRELLVQSGLISGSALYIDGTKIEADANKYSFVWKKSILKY
                     KDSLDQKALENYQQMVETKILPELIDDLKDELSIEEIERIRQSLEEKENQLIEAIDQT
                     ETVEERKLLRKEKSEVHKQKKRFDDFAQRKMSYEEQLVIMGVRNSFSKTDHDATFMRM
                     KEDHMLNGQLKPGYNIQLATENQFALAYDCYPNPTDTRTFIPFLEKIESKIGLPENIV
                     ADAGYASEENYCYVLDETESTPIIPHQGYLKEKKRAHKQNQFHRDNWTYNELDDYYIC
                     PNQKRVVFSHYSQRKDRNGFIRNFKIYECEDCTGCPLREKCTKAKEGKNRRLNINPTW
                     EYIKIKANEKIESKETASYYAQRKIDVETVFGNIKQNMKFKRFHVRGAEKIFKEMGLV
                     FLAHNFRKLVTRVRKYEGKTIIQNQI"
BASE COUNT         2746 a         1800 c         1516 g         2807 t
ORIGIN      
        1 tgggagacaa aagattttga tgctattgat acaatattct tgttgaactc gccctactac
       61 aatgatttgt gtttttgatt gccttcatgg atgaccttta ctaggggctg atttttcaac
      121 tcactaacgc ttgattaaac tatttcattc gttgaggcgt tagtgcattt tgggagcagt
      181 acagaaatct catctgcaac acaaatttcg tcgtgttacc tccgcaaggc tgactcggct
      241 tctcaaaagt gtaaacattt agaagccaga cagctactgt gataaagcgt agccattatc
      301 aaagaaaagc ggtcgctgtc agcagtatgc attccctatg gagtctcaat cttctgggca
      361 aacttacatc atatgcaaca actttggaca agtttttgaa atccaacaag actatagtat
      421 catttttatc ccgttcactc acattttcca acaattttta atcattaatg aaacataaat
      481 ctatgaaaac attaaggctg ggaaaactta attcccagcc tcttcgcttt cttttgatac
      541 gcatgttttc acacactatt tcaaacagtt attcaccttt gtaataacct gcaatagatt
      601 tcacttctaa aaattcttca ataccgaagt cgccccattc acggccaata cctgattgtt
      661 tataaccacc gaatggtaag tctgacgcac gtccagcttc gttaatttcg atagtacctg
      721 cttcaataga acgtgcaaca cggataaggt tttctttgtt ttgaccgaaa acatagccgg
      781 caagtccgta ttttgtatcg ttagcaattt caatcgcttc gtctaaatct ttatacgtaa
      841 taattgacat aacaggtcca aaaatttctt cttgcgcgat tgtcatttga ttattcacat
      901 ttgtaaagat tgtaggtttc gcgaaatacc ctttatctag accatccggt ttacctgtac
      961 ccccgtataa tagttcagcg ccttcatcga tgcctttttg aatgtagtct tgtacttgat
     1021 tgtattgttt ttcactcaca ataggaccca tttgtgtttc agtattttgt ggatcgccga
     1081 ctttcacgtt cgccatttgt ttttttactt ctttaagaaa atcgtcttta atactttccg
     1141 gcactaatgt acgtgtgcct gctgtacata cttgccctgt attgttaaca actttcttca
     1201 ctgccgcttt agccgcttct tcaagattcg catcatctaa aatgataaat ggagatttcc
     1261 cgccgagttc caatgatact tttttgaagt ctttgctcgc cgcttccata atttttgaac
     1321 ctgtgccacc agaacctgta aatgacacca tgcggacatc aggatgttga gttaacggtg
     1381 taccgacacc ttcaccatcg ccattgacaa ggttaaatac acctttgggt acaccaactt
     1441 tatcgaaaat ttcagctaaa ataatcgctg catatggcgt caattcagat ggtttgagga
     1501 caaccggact tcctgccgca aatgctgccg ctaatttaag tgatgtttgg ttcgttggga
     1561 agttccaagg tgtgacaagt cctgcaacac caattgcttc tttcacgatt aagttatctc
     1621 cgcgacgttc ttcaaattgg aaatcattca atgcgtcacg tgcagcttta aaatggttta
     1681 agcccatttg atagtgcact ttttctgatt gtgtcacagg tgcacctagc tctaatgtca
     1741 ttgcttctat taaatcatct ttacgatttt catattcttt aacaatacga tctaacaagt
     1801 cttgtcgttc tttgacagac gagttacgaa atgaaagata cacgtcatga gcagcttgaa
     1861 ctgcttggtc tacatctgct ttattccctt ttgcgatatg accaaatact tcttctgtgg
     1921 ctgggttaat gactgctatc gtttcaccgc tatgactttc aacccattca ccattaatat
     1981 attgttttgt ttgatctctc atgaacaaac actccttcat ttaatgtcat acactttgta
     2041 ttgccaagtt tattcctttt taaacctgac cctacaaatc aaattttttc tgtcattaca
     2101 ttaacttgat aaacaataaa agagtaagca catacaccaa tcgttcgcgt cgtcttactc
     2161 ttttattatt ttctttgaat gcttatagcg ctttttcttc taaatcaata tagtcatgcg
     2221 cccaagtttc gagcggttct aatgcacgtg ccaatgctac acctttttct gttaaatggt
     2281 aacaaactga cggcggattt gtcgaaataa cttctttcgt taataactct gcatcagcca
     2341 actcagccac tttcatagac aaggctctat tagtaattgg acgtaaatgt cttttcatct
     2401 ctgagaaatg cgctttatat ccatcgcaag tcgaaaggta atgcaaaatc aaaccgttcc
     2461 aactgcgtcc taaaatttta aatgtttctt ctaaatatgg acatacttcc atagttatca
     2521 cctctcaatt ttaaatttgt gataacaaca ttaatcggat taagctttaa cttgttccgt
     2581 ccaaatatca gcacctaacg ctttaagtgt tttcacaata tctgtataac ctcggtagat
     2641 atgcttcaca ttataaatcg ttgtcacacc ttctgctaac aatccagcta cgattaagca
     2701 tgcacctgca cgtaagtcac ttgcgtacac ttcggtgcct gttaatttcg atggcttcac
     2761 tgtcgcagta ttttggtctg ctgttatcaa tccattcatt ttttgtaact ctttcacatg
     2821 tctgaagcgc tctggataaa tcgtttcagt gacaaaacta ggtccatttg ctaagaagag
     2881 taaaggtgta ataggttgtt gtaaatccgt tgcaaaaccg gggtacacaa gcgttttgat
     2941 atcgacactt ttataaggtg cagaagattg gactatcatg tagtcatcgc ctgtctctat
     3001 tgtaacacct aactctttca atttcacagt gagtgcttcc atatgttttg gaataatgtt
     3061 gtcaatatgt accgactcac cacaagcggc cgcaatacac atgtacgttc cagcttcgat
     3121 acgatccggt atgattgaat ggcggctacc atgtaaatga ggcacaccga caattttaat
     3181 cgaacttgtc cctgcacctg tgacctttgc gcccatacta tttaaaaagt tggcaacatc
     3241 gaccacttca ggttcttttg ctgcattttc gataatcgtt tgcccttccg cacgtgtcgc
     3301 agcaagcata atattaatcg ttgcacctac actgacaata tctaaataaa tgttcgcgcc
     3361 taccaaacgt tctgcctcaa ttttcattga tgtgaggctc gactcatcta ctgttgcacc
     3421 taaagcctta aaccctttaa tatgttgatc aatcggtctc ggcccaagcg gacatcctcc
     3481 aggtaaacca atgacgcact ttttaaagcg accgagcata gcccccatca tataataaga
     3541 agcacgcaaa gattcaactt tattgtttgg caaaggggcg ttttcaatat gtgtcgggtc
     3601 tactactaaa gttgagccgt taagttcagt cttaatgttt aaatctccca ataagctaac
     3661 cagcgtttca acatcagaaa tttgtggcaa gccatctaat gttaccggtg cttctgccat
     3721 taatgttgca ggtattatgg caactgaact gtttttcgca ccattaattt caacactccc
     3781 ttttaaagtt tggccacctc ttatttttat cacttcttgt gccatgtcat tgaactcctt
     3841 ttcccttgtt cattttaacc ttataatact atattaaaag cattataaag taaatttttt
     3901 caaattgcaa aatgaaaaaa cgacgctttg agatgtttag ccctactttg cgttcaattt
     3961 ttgtaaatat gatagcgatt gaacgacttt gcctaccttt gcatcaagcg tttcctacac
     4021 gttttcacta tagagcgtca tcacgattat caaaatatga aaaagagagt aaccgactca
     4081 caacttgtga tcatgctacc ctcttttgaa tttaatgatg ttgacactgc acaaacatgt
     4141 gatacgtgtg tgacatctct taaaatagat taacctttaa tgtttgctgc tttacctgaa
     4201 gtaccgaact ctttaatttt tccaattaca gtttctttaa tcgcttcacg agctggtcct
     4261 aaatatttac gtggatcgta aacttctttg tcttgatcca atacttcacg aacacgttta
     4321 gctgaagcaa tttggttctc agtattaaca ttgattttag ccgttccgaa tgaaatcgct
     4381 tttttaatgt cgtgagtagg gatgcctgta ccaccgtgta atactaatgg caatccagtt
     4441 gaagcaccga tttcttccat ttctttaaaa cctaagtttg gttcaccttt gtatggtccg
     4501 tgaactgaac ctaaagcagg cgctaatgca tcgatacctg tagctttaac taagttttga
     4561 cattcagttg ggttagcata gataacacct tcagcaacaa cgtcatcttc ttgaccacca
     4621 acagtgccta attcagcctc aacagataca ccgcgttcgt gcgcgtattc tacaactttt
     4681 ttcgtaattt tcacgttatc ttcatatggc tcgtgtgatg catcaatcat aacagatgtg
     4741 aaaccagcat caatcgcttc tttacatttt tcaaagcttg aaccatggtc taaatgaatc
     4801 gcaacaggaa ttgtgatttc gtagtcgtgt aatagtccct ctaccatttt aactacagtg
     4861 tagaagccac ccatgtatct tgctgctcct tcagatacac caagaattac aggcgcattc
     4921 tcttcttgag acgcttgtaa aatcgcttgt gtgaactcca agttatttag gttatattga
     4981 cctacagcat aaccattttc ttttgcgtcg attaacattt ctttcattga aactaaaggc
     5041 atgaaagttc ctccttgcgt gcatgtcgca cgaatattta taaatacagt atagcaaagt
     5101 cattgttaat atgcaccgca aaatcgcact aaatttgtga aaaatatcgt aatttatcat
     5161 gtaagcgcaa ccattgctgt gaattgattc taacacgatt attttataaa atgaattttg
     5221 aatttcgtag cattaacagc tgttaaaaaa ccaaaaattt aattttatat atatacaaaa
     5281 aattgaccaa aaaggaggca acatgcatgt caaaaatgct cacaacacaa ttaacaggta
     5341 tatttaatcg actcgatcag caagagttgg atattcaaat ggctgcacaa agtttaattc
     5401 aagcgatggg tggcgaaggt catgtttaca ttaaaggtta tggtgattta aaatgctttg
     5461 aatcctacat cttaacgagt tttgagaaat tgcattcaag tttggcgcta gacgattatc
     5521 cctcgtttga cgtgttagac acgacagata gagtgttact gttcggagcg gagtatagcg
     5581 aggaaatggc acgtgatttg gaacaattaa ttgcggatga tcgcgatgtt gtcgtgatta
     5641 cgaataaacc taaagaagtt gaattaccgg atcatttaat gcattttatt aatttgtcga
     5701 caccgagacc gattgtttac acagaagatt atgataaagt cgtacaaccg catctcatgg
     5761 cgttgaatta tgtgtattat gaaatttata cgcaaatggt tgaaatgatg cgtgatttag
     5821 atttggaata gtattcataa gatagggacc gggaaaacta aatgtccctc tccctactca
     5881 cagtccaatt ttacacactg aaaacgtctc tacttattga tgacctttcc agtgtgtaac
     5941 ttctatatca agtaagaccg caattctatt ccttctcttt ctttttgaac acatactcaa
     6001 tgatagaaaa agcgattaaa gtgatgatac tgataaacag ggacgcaatc ctcatttcgt
     6061 tccaaataaa gtgcgcgatt aaaatagatg caatgataaa acaaatgaat ttaagccaaa
     6121 atttcattgt gatacccctc cactttccac acgttttatc acttatctta aatatataaa
     6181 aatataattt gataataaca tactaaaaag acaagtacct cttttgaatt aaaagatact
     6241 tgcctttcat ctattctaat gtacgatttc ttgtccacgt ttattccacg tgaagaggaa
     6301 gctaatcatt gctaagacac taatgattgt taataagatg aagcctgcac tccaacccat
     6361 atgatctaca atcgcaccca tgacaatgtt cgccatgaca gcgccaccga ggtaaccgaa
     6421 taaacctgtt aaaccggctg cagtccccgc tgcttttttc ggcacataat ccaatgcttg
     6481 taaaccaatc aacattactg gaccatatat taaaaagcca attgtaatta atgcaaggtt
     6541 gtcaatgagt ggattgccag gtgggttgag ccagtatacg acaaccgcaa tcgttacacc
     6601 aatcataaag ataaagcctg ctggaccacg acgaccttta aatactttat ctgataacca
     6661 accacagata agtgtacctg gaatacctgc ccattcgtat aagaaatagg cccagcctga
     6721 ttctttcata tcaaagcttt tcacttcact taaatagagc ggcgcccagt ctaacacacc
     6781 atatcggaca aagtagacga aaatattcgc aatcgcaata atccacaccc atttgttgtt
     6841 aaggacgtat ttgaataaaa tctctttcgt cgtcaattct gtttcgaatg tctctttctt
     6901 ttgtgttgga taatcatcac gatacgcttc gattgatggt aaaccgactg attgcggtgt
     6961 atcacgcact aaaacgtatg acgcaatcgc aatgacaatc gcaagtaacg caggataaat
     7021 aaatagggct gacccaaaag tagctcctat atgaaaaata gaggtctttc catttagata
     7081 gtagtggaaa gacctctatt tatcttttga aagtgaatac aaaaataaag cacactctgc
     7141 tataatatag gtgattaatc catttgagag aggtgcttta tcatgtatca aaattatacc
     7201 ataaaccaac tttgtttgcc tatagatctt gaaattaaat tagaagaaaa tgattttgct
     7261 catgccattg tgcagtttgt tgactctatt cccgatgaag tctttcttcc ttattatcaa
     7321 tctatgggta gaccccaata tcatcctcgt atgctacttt ccattattct ttgtgcctat
     7381 attcaagggg tttattcggg ccgccaaata caaaatatgc tgatagatag tattcggatg
     7441 cgctacttat ctcaagagca attccctaac tttcgtacta ttaatcgttt tcgcgttcat
     7501 ccgattatga acgatattct agatcattca tttgttcaat ttcgtgagct actggttcaa
     7561 agtggcttaa tcagtggcag tgctctatac attgatggta caaaaattga agcggatgcg
     7621 aataaatact ctttcgtttg gaaaaaaagt attttaaagt ataaggatag ccttgatcaa
     7681 aaagcccttg aaaactacca acaaatggtg gaaacaaaaa tcttacctga gttaatagat
     7741 gatttaaagg atgaactttc tatagaagag attgaaagga ttcgtcaatc tttggaagaa
     7801 aaggaaaatc aattaattga agcgattgac caaaccgaaa cagtagaaga acgaaaatta
     7861 cttcgtaaag aaaaatctga agttcataag cagaagaagc gattcgatga ttttgcccaa
     7921 agaaaaatga gctacgaaga acaattagtg attatgggtg tacgcaatag tttctcaaag
     7981 acggatcatg acgctacttt tatgcgaatg aaagaagatc acatgcttaa tggccaacta
     8041 aaaccaggtt ataatattca acttgcgaca gaaaatcaat ttgctcttgc ttatgattgt
     8101 tatccaaatc caacagatac acgaacattt atcccatttc ttgaaaagat tgaatcaaaa
     8161 ataggtttac cagaaaatat tgtcgcagat gccggttatg caagtgaaga aaattattgt
     8221 tatgtgttag acgaaacaga atccaccccc atcattccgc atcaaggtta cttaaaagag
     8281 aagaaacgcg cccataaaca aaatcagttt catcgagata attggactta caacgagttg
     8341 gatgattact atatttgtcc caatcagaaa agagtagtgt tctcacatta ttcacaacgt
     8401 aaagatagaa atggatttat tcgaaacttc aaaatctatg aatgtgaaga ttgtacagga
     8461 tgtccattga gagagaaatg taccaaagca aaagaaggaa aaaatcgacg tttgaatatt
     8521 aatccaacct gggaatatat aaaaataaaa gcgaatgaaa agatagaaag caaagaaaca
     8581 gcctcatact atgcgcagcg aaagatagat gtcgaaacag tttttggaaa cattaaacaa
     8641 aatatgaaat ttaaaagatt ccatgtccga ggagctgaaa aaatttttaa ggaaatggga
     8701 cttgtatttc ttgcgcacaa ttttaggaaa ttagtaacta gagtaaggaa atatgaggga
     8761 aaaacaatca tacaaaacca aatatagggg gaaaatcctc tatatttcat ccaaaaaaaa
     8821 caaaaatcga agacatcttt cacgggtgcc ttcgattttt tggttcaaa
//
LOCUS       DANHPA010000102         8797 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.102, whole genome shotgun sequence.
ACCESSION   DANHPA010000102 DANHPA010000000
VERSION     DANHPA010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 8797)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8797)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8797
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.102"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(262..1140)
                     /locus_tag="PTC28_002013"
     CDS             complement(262..1140)
                     /locus_tag="PTC28_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002445753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE2"
                     /protein_id="HDK5717259.1"
                     /translation="MTEFDLSTREGRWKHFGSVDPVKGTKPTTKDEMTDLQSTHKNFL
                     FEIEEVGIKNLVYPVWIDQYQTAGNFSFSTSLNKDEKGINMSRILESVEAEYDNGIRL
                     EFDALTQLLNQLKSRMKQHSAGVDVSGKWFFNRYSPVTQIKAVGHADVTYGFALENDV
                     VSRKEITIEAAVTTLCPCSKEISEYSAHNQRGIITVKAYLNKAATLPEDYKEVILDAM
                     EANASSMLYPILKRPDEKRVTERAYENPRFVEDLIRLIAADLVEVSWLEGFDIECRNE
                     ESIHQHDAFAKLKYRK"
     gene            complement(1186..1863)
                     /gene="bshB2"
                     /locus_tag="PTC28_002014"
     CDS             complement(1186..1863)
                     /gene="bshB2"
                     /locus_tag="PTC28_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002458388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis deacetylase BshB2"
                     /protein_id="HDK5717260.1"
                     /translation="MTTEHHILVIFPHPDDETFSSAGTLARYIDEGVPVTYACLTLGQ
                     MGRNLGNPPFATRESLPDIRERELDDAMKAIGITDLRKMGLRDKTVEFEPAEEMDAMV
                     QSLIDETQPSTIISFYPGYAVHPDHEATAEAVVRTVGRMDVARRPRLQLVAFSNDAVE
                     QLGEPDIVNDISAYQDRKYAAFEAHRSQTGPFLEQLANPQGDVSGAPKDAANFLTTET
                     FWTYSFK"
     gene            complement(1882..2241)
                     /locus_tag="PTC28_002015"
     CDS             complement(1882..2241)
                     /locus_tag="PTC28_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YojF family protein"
                     /protein_id="HDK5717261.1"
                     /translation="MQPITEEAVQALLDEYANQPVYLHVETTNGAYANHFDQRVFNAG
                     TFLRNIQVTYQHAQLKGGHKDPYRVGLKLGEHSWVYVQGLTHYEVTEDGMFLLAGFNY
                     EGQLAAALEMSHKPFKA"
     gene            complement(2327..3166)
                     /locus_tag="PTC28_002016"
     CDS             complement(2327..3166)
                     /locus_tag="PTC28_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDK5717262.1"
                     /translation="MKIENRIQQNQHHFTKVDQQIAQFILSVDDHTDLGAINQLADAI
                     GVSPSSITRFAHKLNYDSFQSFRFAIQHELQTEPIHNSPSIQILHQHYRAIMDHTGEF
                     LIEDDLMYLVNTIEQSDKIIFIGIGSSGLSAQELYFRTSRMGFNTLAITDAHLMTVIG
                     HMCHGNTTIVAFTNSGATKEIMDSLSHGRETGATVIAISHFRTPALEQHCHRIIMTAD
                     RNQTHDAYFINSQLANHFIIDLLSYHLLQNEERLAHFTSSYEQLLEKRTHTTYSTHDF
                     RRL"
     gene            3286..4824
                     /locus_tag="PTC28_002017"
     CDS             3286..4824
                     /locus_tag="PTC28_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDK5717263.1"
                     /translation="MNTLFDKAQQFGKSFMLPIAILPAAGLLLGIGGALSNPNTIEAY
                     PFLNIPLLQHLFILMRTAGSIVFQNLSVLFAIGVAVGLARADKGTAGLAAMLGFLIMN
                     ATMSGLLTITEQVAAPDQLAKAGQGMVLGIQTVETGVFGGIIVGIITAMLHNQYYKIT
                     LPQFLGFFGGSRFIPIVTAFASIVLGLVMFFIWPLFQHAIMGAGQIVKQTGVIGTFLY
                     GFILRMLGPFGLHHIFYLPFWQTALGGSLELNGKLIQGTQNIFFAQLGDPATAHYYEG
                     VSRYMSGRFITMMFGLLGAALAIYHTAKPERKKVVGGLMLSAALTSFLTGITEPLEFS
                     FLFVAPLLYVVHALLDGLAFMMADIFNITVGQTFSGGFIDFILFGVLQGQAKTNYLWI
                     IPIGLVWFALYYVIFRMLIQMFNFKTPGREDETTQQSVQTNERATTIIQGLGGHENIE
                     IVDCCATRLRVMLKDTQKVNESLIQCTEPKGIITKGNGVQIVYGPHVSIIKNEVEEQL
                     EGSH"
     gene            4825..5499
                     /locus_tag="PTC28_002018"
     CDS             4825..5499
                     /locus_tag="PTC28_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HDK5717264.1"
                     /translation="MNLTQGLIVSCQALPDEPLHSSFIMGKMALAAKQGGAVGIRANT
                     KADILAIKEEVDLPVIGIVKRDYDNSSVFITATQKEVDELIESGCEVIAMDATLRERP
                     AEDLETLVQYIRKAAPDVEIMADIATVEEAQNAERLGFDYIGTTLHGYTEQTTGQVLY
                     ANDFAFLKDVLANVSQKVIAEGNVITPEMLKTVMDLGVYAAVVGGAITRPRDITKRFV
                     KMIEEE"
     gene            5505..6239
                     /gene="nagB"
                     /locus_tag="PTC28_002019"
     CDS             5505..6239
                     /gene="nagB"
                     /locus_tag="PTC28_002019"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HDK5717265.1"
                     /translation="MKIINLGREANASFYVASELFKQMLYQKDSRLGLATGGTMVKVY
                     DYLVELLQKNQLDVSQVETFNLDEYVGLASDHEESYCQYMKHVLFGAYPHFTAENIHV
                     PNGEASDIEAESQRYEALLEEGGPLDIQILGIGQNGHIGFNEPGTPFESLTHCVDLTE
                     STIKANSRYFDSIDDVPKQAISMGLSSIMKAKRIILLAFGEQKREAIRHLMSQEVTTD
                     VPATILHRHPHVEVYVDDAAMPEIDN"
     gene            6338..6976
                     /gene="hxlA"
                     /locus_tag="PTC28_002020"
     CDS             6338..6976
                     /gene="hxlA"
                     /locus_tag="PTC28_002020"
                     /EC_number="4.1.2.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019834869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hexulose-6-phosphate synthase"
                     /protein_id="HDK5717266.1"
                     /translation="MELQLAIDLLNKEDAAELAKKVTDYVDIVEIGTPIVINEGLPAV
                     QHLKENVKDEDVKVLADLKIMDAADYEVSQAVKFGADVVTILGVAEDASIKNAVEEAH
                     KHGKELLVDLIAVQDLEKRAKEIDALGADYIAVHIGYDLQAEGQSPLESLRKVKSVIK
                     NAKIAVAGGIKPETVKEVADEGPDLIIVGGGIANADDPREAAKQIREAIEGK"
     gene            6978..7526
                     /gene="hxlB"
                     /locus_tag="PTC28_002021"
     CDS             6978..7526
                     /gene="hxlB"
                     /locus_tag="PTC28_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-3-hexuloisomerase"
                     /protein_id="HDK5717267.1"
                     /translation="MAIQQQFERIRREIAQTLSQVDDQAIAQFEQVVSDAEAVFVTGK
                     GRSGFVANGFAMRLNQLGKKAHVVGEATTPSIQKGDVLIVISGSGSTTHLKLLADKAH
                     EVGATIALVTTATDSKIGELANVTLILPAGTKYQAEGSEQPLGSLFEQSAQLMLDGVV
                     LDFMTAWDVDETTMQNNHANLE"
     gene            7824..8507
                     /locus_tag="PTC28_002022"
     CDS             7824..8507
                     /locus_tag="PTC28_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_501440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HDK5717268.1"
                     /translation="MEYSPKQGVRSHGLPHDPFKSSTVPRPIGWISTVSKDGKDNLAP
                     YSQYQNLTWDPPMVMFAANQSVLGKHERKDTVKNAEETGWFVWNMATYDLREAVNLSS
                     KALPPEEDEFEFAGVTKEACIEAPGYRVKESPVHFECEYVQTIRIPTGDPVSTVDIVI
                     GRVAQVHIDDKVIMENGKLDIKSIRPIARLGYYDYTVVDQIFEMKAPAATKEELAGLE
                     GRNFDNTTE"
BASE COUNT         2702 a         1573 c         1941 g         2581 t
ORIGIN      
        1 tttgaaatac aattgctcaa atgggcgaga ttcttgaggg gtgaatgtgt aaataaatgc
       61 cattatactt taatagtggc tactgtttaa cgcaaaatca aattcggctt ccattaaatg
      121 aacactttta atggaagccg attgagttga aggtccagcc tctagaaaga gagggcaatt
      181 agaatcttac aatcatagaa actgggggat attcaattaa aatatatcaa ctcaagcaat
      241 caaaaaaatt attccatccc gttattttcg atatttcaat ttcgcaaatg catcatgttg
      301 atgaatcgat tcctcgttac gacattcaat atcaaagcct tctaaccaag agacctcgac
      361 taaatctgcc gcaattaaac gaattaaatc ttccacaaaa cgcggattct cataagcacg
      421 ttctgtcacg cgcttttcat ccggacgttt taaaattgga tacaacatag agcttgcatt
      481 ggcttccatt gcatctaaaa taacttcctt ataatcttct ggaagtgttg ccgctttatt
      541 gagatacgct ttcactgtaa tgatgccacg ttggttatgt gcagaatact cactgatttc
      601 ctttgaacaa gggcatagcg tggtaacagc tgcttcaatg gtgatttctt tacgagacac
      661 tacatcattt tctagcgcga aaccataagt cacatcagcg tgacctactg cttttatttg
      721 tgtaaccggg ctatagcgat taaagaacca cttaccacta acatccacac cggcactatg
      781 ctgcttcatg cgacttttca actgatttaa taattgtgtt aatgcgtcaa attccagacg
      841 aatcccgttg tcatattctg cttctacaga ttctaaaatc cggctcatat taatgccttt
      901 ttcgtcttta ttcaagcttg ttgaaaagct aaagttccca gcggtttgat attgatcaat
      961 ccatacaggg tacacgagat ttttaattcc tacttcttct atttcaaaca aaaaattctt
     1021 gtgtgtactt tgaaggtcgg tcatttcatc ttttgttgtt ggttttgttc ctttgacagg
     1081 atctactgaa ccaaaatgtt tccaacgacc ttcacgtgtc gataaatcga attcagtcat
     1141 gtatcttcct ccactaaaat gtcacatgca tgtgcaatac gttatttatt taaatgaata
     1201 agtccaaaat gtttcggttg ttaaaaagtt tgcagcatct tttggcgcac cagaaacgtc
     1261 accttgtggg ttggcaagtt gctccaggaa aggtcccgtt tgtgaacgat gtgcttcgaa
     1321 tgcggcatat ttacggtctt gataagctga aatgtcattg acgatatcag gttcgcccaa
     1381 ctgttcaacg gcatcattac taaatgcgac taattgaagt cttggacgac gcgcaacatc
     1441 catacgacca acagttctca cgaccgcttc tgctgttgct tcatgatcag gatggacggc
     1501 ataaccggga taaaacgaaa tgatcgtgga aggttgtgtt tcatcgataa gtgattgcac
     1561 catcgcatcc atttcttccg cgggttcaaa ttccacagtt ttatcacgta agcccatttt
     1621 acgtaaatct gtaataccga ttgctttcat ggcgtcgtcg agttcacgtt cgcgaatgtc
     1681 tggcagtgat tcacgtgtag cgaaaggcgg gttcccaaga ttacgtccca tttgtccgag
     1741 tgtcagacat gcataagtta cgggcacacc ttcatcgata taacgtgcaa gcgtacctgc
     1801 tgaagaaaat gtctcatcgt ccgggtgtgg gaagatgaca aggatatggt gttcagttgt
     1861 cataatcatc aatactcctt tctatgcttt aaaaggcttg tggctcattt caagtgctgc
     1921 cgcaagttgt ccttcataat tgaatcctgc caataaaaac atcccatctt cagtcacttc
     1981 ataatgcgtt aaaccttgaa catataccca gctatgttcg ccaagcttca gtcctactcg
     2041 gtaaggatct ttatgtcccc ctttaagttg tgcatgttgg taagtgactt ggatatttct
     2101 taaaaaagta cctgcgttga acacacgttg atcaaagtga ttggcataag cgccatttgt
     2161 cgtttcaacg tgcagataga caggttgatt tgcgtattcg tcgagtagtg cttgtacggc
     2221 ttcttctgta atcggttgca aaagattcac tgccttcctg attatgatta tctatctatt
     2281 ttactaaaaa taactcaaaa ttaatatagc tctgctcagt ttaatcttat agacggcgaa
     2341 aatcatgcgt cgaataagtc gtgtgtgttc ttttctctaa cagttgttca taactcgacg
     2401 taaaatgggc taagcgttct tcattttgta gtaaatgata actcaataaa tcaataataa
     2461 agtgattggc gagttgagaa ttaataaagt aagcatcatg tgtttgattg cgatcggcgg
     2521 tcataatgat gcgatggcaa tgttgttcca gtgcaggtgt tcgaaaatga gaaatggcta
     2581 tcacagtcgc cccggtttca cgaccatgac ttaaactatc cataatttcc ttcgttgcgc
     2641 cactattcgt aaaagcgacg atcgtagtat tgccatgaca catgtgccca atgactgtca
     2701 ttaaatgcgc atccgtaata gcgagcgtgt tgaagcccat tctcgacgtg cgaaagtaca
     2761 attcttgcgc gcttaatcca gaactaccaa taccgataaa aatgatttta tcactctgtt
     2821 caatcgtgtt gacgaggtac atcaaatcat cttcaatgag aaattcaccc gtgtgatcca
     2881 tgatggcgcg ataatgttga tgtaaaattt gaatggaagg actattgtga atcggttccg
     2941 tttgcagttc gtgttggatg gcaaaacgaa acgattggaa gctatcataa tttaatttat
     3001 gtgcaaagcg tgtaatacta gaaggtgaca caccaatcgc atccgctaac tgattaattg
     3061 cacctaagtc cgtatgatca tctaccgaca aaatgaattg agcgatttgc tggtcaactt
     3121 ttgtgaaatg atgttgattt tgttgaatac gattttcaat tttcatcgtc atcctccttt
     3181 taaactcagt atatttgaaa ataatttcca aaacaacgta ttttgttgac ggaaattttc
     3241 ttagtgatat attgagagtg aacagggaag aagaggggga caaaattgaa tacattattt
     3301 gataaagcgc agcaatttgg gaagtccttt atgttaccaa ttgcgatttt accggcagca
     3361 ggattattac tcggtattgg aggcgcacta agtaatccga acactatcga agcgtatcca
     3421 tttttaaata ttccattgtt gcaacatttg tttatattaa tgcggacggc tggcagtatt
     3481 gtgtttcaaa acttgtcagt attgtttgcg ataggtgttg cagtcggttt ggcacgagca
     3541 gataagggta ctgctgggtt agctgcgatg ttgggctttt taattatgaa cgcaacgatg
     3601 agcggccttt taacaattac agaacaggtg gcggcgcctg accaactcgc taaggctggg
     3661 caagggatgg ttttaggtat tcaaactgta gagacaggcg tgtttggggg gatcattgtg
     3721 ggtatcataa cggcaatgct ccataatcaa tactacaaaa tcacattacc gcagttttta
     3781 ggcttctttg ggggctcgcg ctttattcca attgtgacag cttttgcatc tattgtatta
     3841 ggtttagtga tgttctttat ttggccgtta tttcaacatg cgattatggg agcaggtcaa
     3901 attgtgaagc aaacaggcgt cattggtacg ttcctatatg gtttcatatt gagaatgcta
     3961 gggcctttcg gattgcatca cattttttat cttccatttt ggcaaaccgc gctcggaggt
     4021 tcactcgaat tgaatggcaa attgattcaa gggacgcaaa atatcttttt tgcacaatta
     4081 ggtgaccctg caacggcaca ttattatgaa ggcgtttcgc gttatatgtc ggggcgtttt
     4141 attacaatga tgtttggact gctaggtgcg gcactcgcga tatatcatac agcaaaacct
     4201 gagcgcaaaa aagtggtcgg tggtttaatg ttatctgcag ctttaacgtc ttttttaaca
     4261 ggtattacgg agccgttaga gtttagcttt ttatttgttg ccccattact ttacgttgtt
     4321 catgcattat tagatggttt agcgtttatg atggcagata tttttaacat tacggttggg
     4381 cagacgttta gcggtggttt tatagatttt atcttgtttg gtgttttaca aggccaagcg
     4441 aaaacgaatt atttatggat tattccaatc ggtctcgtct ggttcgcact ttactatgtg
     4501 atttttagaa tgttaattca aatgtttaac tttaaaacac cggggcgtga agatgagaca
     4561 acgcaacaaa gtgtacaaac aaatgaacgt gcgacaacca ttattcaagg tttaggtgga
     4621 catgaaaata tcgaaatagt cgattgctgt gcgacacgcc tgagagtcat gttaaaagat
     4681 acacaaaaag taaatgaaag cttgattcaa tgtactgaac ctaaaggaat cattacgaaa
     4741 ggaaacggcg tccaaattgt ctatggacct cacgtttcaa tcattaaaaa tgaagtagaa
     4801 gaacaattag aagggagtca ttagatgaat ttaacacaag gattaatcgt atcttgccaa
     4861 gcgttaccag atgagccact ccattcatca ttcattatgg ggaaaatggc gttagctgca
     4921 aaacaaggag gcgctgttgg gattagagcg aatacgaaag cagatatttt agcgattaaa
     4981 gaagaggtgg atttgccagt catcggtatt gtgaagcgag actatgacaa ctcttccgta
     5041 tttattactg cgacacaaaa agaagtagat gaacttattg aaagcggatg tgaagtgatt
     5101 gcgatggatg cgacattacg tgaacgtcct gctgaagatt tagaaacttt agtacaatat
     5161 atccgtaaag cagcgccgga tgttgaaatt atggcagaca ttgcgacggt agaagaagcg
     5221 caaaatgcag aacgtctcgg ctttgattat attggtacga cgttacatgg ctatacagag
     5281 caaacgacag gtcaagtgtt atacgccaat gattttgcgt ttttaaaaga cgtgctagcg
     5341 aatgtatcgc aaaaagttat cgctgaaggg aatgtgatta cgcctgaaat gttaaaaaca
     5401 gtcatggatt taggtgtgta tgctgcagtt gtcggtggtg ccattacgag accacgtgat
     5461 attacgaaac gtttcgtgaa aatgattgag gaggaataag cataatgaag atcattaatt
     5521 taggtcgtga agcgaatgca tcattttacg ttgcgagcga attatttaaa caaatgttat
     5581 atcaaaaaga cagtcgttta ggattagcga cgggtggcac aatggttaaa gtgtatgact
     5641 atttagtgga attacttcaa aaaaaccaac tcgacgtgtc tcaagtggaa acatttaatc
     5701 tagatgagta tgtcggctta gcgtcagatc atgaggaaag ctattgccaa tatatgaaac
     5761 atgttttatt tggcgcgtat cctcatttta ctgctgaaaa tattcacgtg ccaaatggtg
     5821 aagcatcaga tattgaagcg gaatctcaac gttatgaagc gctattagaa gaaggcggtc
     5881 cgttagatat tcaaatttta ggcatcggtc aaaacggtca tattggtttt aatgaaccag
     5941 ggacaccgtt tgaaagttta acgcattgtg tcgatttaac tgaaagcaca attaaagcga
     6001 atagtcgtta ttttgattcg attgatgatg taccaaaaca agccatttca atgggattaa
     6061 gttctattat gaaagcgaaa cgtatcattt tgttagcgtt tggtgagcaa aaacgtgaag
     6121 cgattcgtca tttaatgagc caagaagtga ctacggatgt gccagcgacg attttacatc
     6181 gtcatcccca tgtagaagtg tatgtagatg atgcagcaat gcctgaaatt gacaattaag
     6241 tcgcgttgaa cttataaatc cgacatgttt aatctctttt ctaaagggta tagcacgagt
     6301 tgtaagagac aaaacatgac ggaggattga tgaaatcatg gaattacaat tagccattga
     6361 tttattaaat aaagaagatg cagcagaact tgcgaaaaaa gtaacggact atgtcgatat
     6421 tgttgaaatc ggaacaccta tcgtcattaa tgaaggctta ccagctgtgc aacatttaaa
     6481 agagaacgtg aaagatgaag atgtcaaagt attagctgac ttaaaaatta tggacgcggc
     6541 agactatgaa gtgagccaag cagtgaaatt tggcgcggat gttgtcacaa ttttaggtgt
     6601 agctgaagat gcatccatca aaaatgcggt ggaagaagcg cacaaacatg gtaaagaatt
     6661 acttgtcgac ttaattgctg ttcaagattt agaaaaacgt gcgaaagaaa ttgacgcatt
     6721 aggtgcagac tatatcgccg tgcatatcgg ttatgactta caagctgaag ggcaatcacc
     6781 tttagaaagc ttaagaaaag taaagtcggt catcaaaaat gcaaaaattg ctgtcgctgg
     6841 tggaattaaa ccagaaacag ttaaagaagt tgcggatgaa ggcccggatt taattatcgt
     6901 cggtggcggt atcgcaaatg ctgacgatcc acgtgaagcg gctaaacaaa tccgagaagc
     6961 gattgaaggt aaataacatg gccattcaac aacagtttga acggattcgc cgtgagattg
     7021 cacagacgtt atcacaagtg gatgaccaag cgatagcgca attcgaacaa gttgtatctg
     7081 atgcagaagc ggtattcgtg acaggtaaag gccgttcagg attcgtcgcg aatggttttg
     7141 cgatgcgttt gaatcaactt ggtaaaaagg cgcacgtcgt tggagaagcg acgacaccgt
     7201 ccattcaaaa aggggatgtg ctcattgtca tttcgggctc aggttcgaca acacatttaa
     7261 aactgttagc cgataaagcg catgaagtcg gcgcgacgat tgcattggtt acgacagcaa
     7321 cggattctaa aatcggtgaa ttggcaaacg tgacactcat cctaccagct ggcacgaaat
     7381 atcaggctga aggttctgaa caaccactcg gcagcttgtt tgaacaaagt gcacagttga
     7441 tgttagatgg tgtcgtgtta gacttcatga ccgcatggga tgtcgatgag acaacgatgc
     7501 aaaataatca tgcgaattta gagtaaaatg aatagaatga caaattaaag tcgatgatga
     7561 agctagtttc tacaccaaaa tgtagcgact agcttttttt gaatgagtga aaagtttgaa
     7621 aggaaagcga tggtaggaat aatgatttaa tgacaaaaac tacatgtctc gatgttggaa
     7681 gtggagatag ggaacagttc tgttcaacgt acatcagatt ctgttaatag aactgcctaa
     7741 taattaaata gaaaacatgt attagcaacg gatgacacca tttattagat taaagtaaag
     7801 gcaatgatga aggaggtaat aggatggagt attcaccaaa acaaggggtt agaagtcacg
     7861 gtttgccaca cgatccattt aagagtagta cagtcccgcg tccgattggt tggatttcaa
     7921 cggtttcaaa agatggcaaa gataatctgg caccttatag tcagtatcaa aacttaactt
     7981 gggatccacc catggtcatg tttgcagcga atcaatcagt actcggcaag catgaacgta
     8041 aagatacagt aaagaatgca gaagagacag gttggtttgt ttggaatatg gccacgtatg
     8101 atttgcgaga agcggtgaac ttgtcgtcta aggcattacc acctgaagaa gacgagtttg
     8161 agtttgcagg tgtcacgaaa gaagcatgta ttgaagcacc cggatatcgt gttaaagaat
     8221 caccggtcca ttttgaatgc gagtacgtac aaaccattcg tattccaacg ggagatcctg
     8281 tgtctacagt ggacattgtt atcggtcgtg tcgcgcaagt tcacatcgat gacaaagtga
     8341 ttatggagaa tgggaagtta gatattaagt ctattcgccc gattgcacgt ctcggttatt
     8401 atgattacac agtagtggat caaatttttg aaatgaaagc gccagccgca acaaaagaag
     8461 aactcgcagg actcgaagga cgtaatttcg ataatacaac tgaataagcg tgcctccgat
     8521 accattaagt gatgtcgttg catgcttaca ggtacattta aacaaaataa tgaaaaattt
     8581 taggaatgtt taagttttat tctaaagttt cataggagca catcaatgtt ttgagttgaa
     8641 ttgaaatgta gccattgtaa caaaaaagtt aacaaaagat gatgaaatta tgattaaaac
     8701 caaagtatct gaacttcaag gtgtatctta agcgacattt taacagatat agtgtaatcg
     8761 ttgttataac tcgaaagaaa gcgtgtagca gaaaagt
//
LOCUS       DANHPA010000103         8483 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.103, whole genome shotgun sequence.
ACCESSION   DANHPA010000103 DANHPA010000000
VERSION     DANHPA010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 8483)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8483)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8483
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.103"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            178..642
                     /locus_tag="PTC28_002023"
     CDS             178..642
                     /locus_tag="PTC28_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDK5717269.1"
                     /translation="MDRQSFTELIQSKFKMVRIEAGYTQDTMAQTIGLSKKTLVQIEK
                     ERVLPNWTTCVSICALFRDSEVLNGTFGCDPLEIVQTISRNQAAYPRYSTVSDIYWDT
                     LASKNGYILQSNKVSELYRILDADKQPIFASPKLREAETYFQRNVKEELIRA"
     gene            867..1997
                     /locus_tag="PTC28_002024"
     CDS             867..1997
                     /locus_tag="PTC28_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="HDK5717270.1"
                     /translation="MQAILVVLFMIVIGAVIGGVTNMIAVKMLFHPFKSYYIFGKRVP
                     FTPGLIPKRRGEIAEKIGQVVEDHLLTESLMREKLETPDMRATVHRAVSQQVAALEEN
                     HMTMQSLVERFDIDVVKDGESFVERYTKQKLNEKYQLHQTDKIAELIPAKVMAEIDHK
                     VSTLDTLLLERARIYLESDKGYDDILEMLETFFVEKGKIVSMLQMFMTKEAIAERIQR
                     ELIRLTTHSKARGILSAQIHAEYEKLKHATLQDWIKPEQMADIEAQVSALVLKQIDLK
                     QRAHMPLKSLVPHLFEMLHDRGIDRITDLILDTLAQRLSTILKQVNIRGLIEEQINRF
                     DLDYIERLIFEIANKELKLIMLLGFILGGIIGFFQGLIAIFV"
     gene            2086..2430
                     /locus_tag="PTC28_002025"
     CDS             2086..2430
                     /locus_tag="PTC28_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002498160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF/YmcA family competence regulator"
                     /protein_id="HDK5717271.1"
                     /translation="MAVNLYDYANKLEQALRESDEYNAIKDAYAKVEADENSKKLFDA
                     FRETQMNFQQKQMQGEEISEEDLQKAQEQAQQIEKDSNISELMNAEQKMSQVFQEINQ
                     IIVKPLDEIYAD"
     gene            2684..3871
                     /locus_tag="PTC28_002026"
     CDS             2684..3871
                     /locus_tag="PTC28_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019164983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair exonuclease"
                     /protein_id="HDK5717272.1"
                     /translation="MVKFLHCADLHLDSPFASKRYLNPTILKDVENSAYKSFENIIDL
                     ALREEVDFVIISGDLFDQHNRTLKAEVFLKSQFERLQKEQIFVYIVHGNHDPLSDEIK
                     TKWPENVTVFSNQVETYQAITKTGETVHLHGFSYDKRESYENKIDAYPTNENRNVVHI
                     GVLHGTYSKSEASDRYTEFRLEDLNAKLYHYWALGHIHLRQQLSDMPEIHYPGNIQGR
                     HFKEQGEKGCLIVEGDHVALKTRFVPTQFIRFESATLETEDISQQALFELIQDFKARV
                     RHQGRAFYRLQLNIRGDEMISPQVLEQLKVLSTEYEENERHFVLIDEWDIRYIDIRQK
                     SIIQEFPAELLEQDDVYERAVKDLYMNPKASKYLESYQQHDRKALVARAEAIIEAELK
                     GGN"
     gene            3875..6799
                     /locus_tag="PTC28_002027"
     CDS             3875..6799
                     /locus_tag="PTC28_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019164984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDK5717273.1"
                     /translation="MKIKSVEIYGYGQFVQRKVEFDQYFTEIFGQNEAGKSTLQAFIH
                     SILFGFPTKKENEPRLEPRMGNHYGGRVTLILDDGMEVDVERVKGSAQGDVKVYMPNG
                     SIKDEAWLKAQLNYINKKTYQAIFSFNVLGLQDIHKHMSEVQLQNFLMQAGALGSTEF
                     IGMRELINQKKQELYKKSGQNPEINRKIEEVRNLEYQIREESAKMESYQRLTEEHEKA
                     SRRLDTLKQNLSQLTALFEEKQKEVALIDQVQEWKGLEADLNIEPLEFPEKGIDRYEL
                     AKVQVDHLERDIGLRVEKQQQLQNENSQLYVPEKSLYQNFESIAKQEDRVKQQDMELK
                     QNEREFNQHEMEIKSLKSHIGWKELHDDVDSSEAQKSFASETLKQKQEHLQTIQQLKK
                     TQDDYQIETVSFEEELEHLSSQLVDDENFEKKKVYDQRLLELKEKRNLFDKMKTSFEQ
                     EAEQKAQQQRRVRGASFFLAIISIAFAIWMFVTEAMVAGIVLTVMAIVFIIGMTLFRS
                     KPVGYDTQFSEELAQLEQEVEQLEAEYDLDFDLSTQYQLRDQIAQRQQQLAILKTKTQ
                     HAKTQYEDTQTAWADATSKLQQLKASLHLSENLSDELLVDAIQTIQMIKDHQQYIEKL
                     HEAYLKLSESLESFYTEVNDKIGSVFQEIDRNTLFHDVREWLKTTSRDMTRHEHNTEQ
                     LNLLENELKHLKHRLNENHQEIQTLFGAIGALDEESYYKHHERYQRYHERLARFNDLT
                     HFLDNQNYGYEKSSKLSEKTTAQLDEEYQKLSEQIDAYNERFLESQSEVSDLLAQMNH
                     METDDTLRHLRHQYQLLRNQLNESAEDWAALSYLEALVDEHIKQIKDKRLPQVVNIAT
                     DIYNDLTSGQYVQVTYANEQVMVRHQDGQMYHPIELSQSTKELLYIALRLSLIHTLKP
                     YYSLPIIIDDAFVHFDAERRAKMMKYLRGMSEEYQILYFTCSRDTNIPAKQLVTLNKI
                     DK"
     gene            6818..7759
                     /gene="yhaM"
                     /locus_tag="PTC28_002028"
     CDS             6818..7759
                     /gene="yhaM"
                     /locus_tag="PTC28_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exoribonuclease YhaM"
                     /protein_id="HDK5717274.1"
                     /translation="MRNIEKLQPGDTVDHFFLIHRATQGVTAQGKDYMTLHLQDKSGE
                     VEAKVWTITKEGMNQLKPERIVHIKGDMINYRGRKQMKVNQFRVATEEDGLRTQDFID
                     GAPMSPEEIKDAMQDYIFEIDNAPLQRVTRYLLNKHEESYFVYPAASTHHHNFVSGLS
                     YHVLTMLEIARQLCIIYPELNKSLLYSGIILHDMGKVRELSGPIATSYTLEGNLLGHI
                     SIASDEVADAARELNVDGEEILLLRHLILSHHGKLEYGSPKLPYVKEAEILNFIDNID
                     ARMNMFEKAFKKIDKGQFTERIFGLEGRQFYKPEKLD"
     gene            complement(7969..>8483)
                     /locus_tag="PTC28_002029"
     CDS             complement(7969..>8483)
                     /locus_tag="PTC28_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDK5717275.1"
                     /translation="LIKVKQDKDDKEGLSDKDAKKKIDEIKEKLDKNPKDFDKIAKEE
                     SMDSTKDKNGSLGYVIKGQMVKPFEEALFKLKEGQISDVVKTEYGYHIIRADKEDDFD
                     KEKSKLKEKIIQNKLQEDPKILTDAYKDLLDEYNVDYKDRDVKKAIEDNILNPDALKK
                     QSSQDGQLGM"
BASE COUNT         2945 a         1335 c         1712 g         2491 t
ORIGIN      
        1 aaataagttg aatttttgtg acaattgcgc attttccagg ttagagattg tttttaaaaa
       61 tgccactttt catttgtcgc attttgtatt aatatgtaat ttgtgtttca agaattgtgt
      121 agaattgcaa tgcttgtgtg cggataaatt tttatttaag aaaggtagtc ataataaatg
      181 gatagacaaa gttttactga attaattcaa agcaagttca agatggtacg tattgaggca
      241 ggttatacac aagatacgat ggctcaaaca atcggcctat ctaaaaaaac attagtacaa
      301 attgaaaaag agcgtgtgtt accaaattgg acaacatgtg tatctatttg tgcattattt
      361 agagattctg aagtattgaa cggtactttc ggttgcgatc ctttagaaat cgttcaaact
      421 atttcaagaa atcaagcagc ttacccgaga tattcaacag taagtgatat ttattgggat
      481 acgcttgcaa gcaaaaatgg ttacatcttg caatcaaaca aagtcagcga actttaccgt
      541 attctagatg cggataaaca accgattttt gcatcaccaa aattgagaga agcagaaact
      601 tacttccaac gcaacgtgaa agaagagctt attcgtgcat aatttaaaat aaatgataga
      661 atgtgggagc atcaacaaac gaaatgttgc gtgctccttt tttataggga aattgatgtt
      721 taacacagta gtttttcggt cataaggtta catatgtatt tgactgagaa tacaacatta
      781 cgtttgtttg ttaaacatga gcaagaatga atggatcgct ctattcatgt ttgattccag
      841 ttgaaattta gaggagagat gtaaatatgc aagcgatttt agtcgtattg tttatgatcg
      901 tgattggcgc tgtgattggt ggtgtcacga atatgattgc tgtcaaaatg ctattccatc
      961 catttaaatc ttattacatt tttggtaagc gtgtaccttt cactccggga ctgattccga
     1021 aaagaagagg agaaattgct gaaaaaatcg gacaagttgt ggaagaccat ttattaactg
     1081 agtctttaat gagagaaaag ttagaaacgc cggatatgag agcgactgtg catcgtgccg
     1141 tttcacaaca ggtggcagca ttagaggaaa atcatatgac gatgcaatct ttggtggagc
     1201 gatttgatat tgatgtcgtg aaggatggcg aaagctttgt tgaacgttat acgaaacaaa
     1261 agttaaacga gaaatatcaa ttgcatcaaa cagataaaat tgcagaactg atacctgcca
     1321 aagtgatggc tgagatagat cataaagtga gcacattaga tactttgtta ctcgaaagag
     1381 cacgtattta tttagaatct gacaaaggtt atgacgatat tctagaaatg ttagagacgt
     1441 tctttgttga aaaaggaaaa attgtgtcaa tgcttcaaat gtttatgact aaagaagcga
     1501 tagcagaaag gattcagaga gaattaattc gtttgacgac acattctaag gcgcgaggta
     1561 ttctgtcagc acaaattcac gcagaatatg aaaaattaaa gcatgctacg ttacaagatt
     1621 ggattaaacc agaacaaatg gctgatattg aagcacaagt gagtgcattg gtattaaaac
     1681 aaatagatct aaaacaacgt gcgcatatgc cgcttaaatc gcttgtaccc cacttatttg
     1741 aaatgttaca tgatagaggt atcgatcgca ttacagactt gattctcgat acattagcgc
     1801 aacgtttatc aaccattttg aaacaagtga atattcgcgg cttaattgaa gagcaaatca
     1861 atcgttttga cctcgattat attgaacgtt taatttttga aattgcgaat aaggaattaa
     1921 aattaattat gttgctcggc tttattttgg gaggaattat cggatttttc caaggattaa
     1981 tagcaatctt tgtataacac tataaaatgt ggtatcgtaa gctaggaacg aggttgaaag
     2041 agacagaatt caatcttaaa atacacaact caaggagaga ttaaaatggc tgtaaattta
     2101 tatgattacg caaacaaatt agagcaagct ttacgtgaaa gtgacgagta caatgcaatt
     2161 aaagatgcat acgctaaagt agaggctgat gaaaattcta aaaaattatt tgatgcgttc
     2221 cgtgaaacac aaatgaactt ccaacaaaaa caaatgcaag gtgaagaaat tagcgaagaa
     2281 gatttacaaa aagcgcaaga acaagcgcaa caaattgaaa aagacagcaa tatttctgag
     2341 ttaatgaatg ctgagcaaaa aatgagccaa gtattccaag aaatcaacca aattatcgtt
     2401 aaacctttag acgaaattta cgctgactaa taaagataaa cgattgaact aacgagtttg
     2461 agatgcgatg tctcaaactc gtttttttag ttaatagctc ttgtaatggc ttactcatgc
     2521 tttttatctc actgatcgtc aagtcaattt tacggtaaaa aaaattaacc atttcaataa
     2581 tacttaaatg agacgcactt taattaacga aaatatgata aaataaatga atacgaaaca
     2641 tgcatacata gatgaaattt gatgataaaa ggagaatgct tgaatggtta agtttttgca
     2701 ttgtgcagat ttgcatctcg atagtccatt tgcatccaag cgctatttaa atccgacaat
     2761 tttgaaggat gttgaaaata gtgcttacaa aagttttgaa aacattattg accttgcatt
     2821 gagagaagag gtcgattttg tcataattag tggagattta tttgaccaac acaatcgtac
     2881 tttaaaggcg gaagtgtttt taaaatctca atttgaacgt ttgcagaaag aacaaatttt
     2941 tgtctacatt gtacatggga atcatgatcc tttatcggat gaaattaaaa cgaaatggcc
     3001 tgagaatgtg actgtatttt caaatcaggt cgaaacatat caagcgatta cgaaaacggg
     3061 agaaacagtg catcttcatg gcttcagcta tgataaacgt gaaagttacg aaaataaaat
     3121 agatgcttat ccgacgaatg aaaatcgtaa tgttgtacat attggcgtat tgcacgggac
     3181 ttatagtaaa tctgaagctt cggatcgtta cacagagttt cgattggaag atttaaacgc
     3241 gaaattatac cattattggg ctttgggtca cattcatttg agacaacaac tgagtgatat
     3301 gcctgaaatt cattatcctg gcaatattca aggccgtcat tttaaagaac aaggtgaaaa
     3361 aggttgttta attgttgaag gtgatcacgt tgcgttaaag acacgctttg tgccgacaca
     3421 attcatccgt tttgaatcag caacgttaga gacggaagat attagccaac aagcgttatt
     3481 cgaactgatt caagacttta aagcacgtgt cagacatcaa ggtcgtgcat tttatcgatt
     3541 acagttgaat atacgcggcg atgaaatgat ttcaccacaa gttttagaac aattgaaagt
     3601 attgtccaca gaatatgaag aaaatgaacg ccactttgtc ttaattgatg aatgggacat
     3661 ccgttatatt gatattcgtc aaaaatctat tattcaagag tttcctgcag aattacttga
     3721 gcaagatgat gtgtatgagc gtgcagtgaa agatttgtat atgaatccga aagcctcaaa
     3781 atatttggag agctatcaac aacatgatcg taaagcgttg gttgcacgtg cagaagccat
     3841 cattgaagct gagttaaagg ggggcaatta accgatgaaa attaaatcag ttgaaattta
     3901 tggttatggt caatttgtcc aacgaaaagt ggaatttgat caatatttta ctgagatttt
     3961 tggacaaaat gaagcaggta aatcgacact tcaagcgttt atacattcga ttttatttgg
     4021 cttcccgacg aaaaaggaaa acgaaccacg tcttgaacca cgtatgggca atcattacgg
     4081 cggtcgtgtg acattgattt tagatgacgg tatggaagtg gatgtcgaac gtgtcaaagg
     4141 gagtgcccaa ggggatgtca aagtttacat gcctaatgga tcgattaaag atgaagcgtg
     4201 gttaaaagca cagttaaatt acatcaataa aaagacgtat caagcgattt tttctttcaa
     4261 cgtgcttggc cttcaagaca ttcataagca tatgagtgaa gtacaattac aaaacttttt
     4321 aatgcaagca ggtgcgctcg gttctacaga atttatcggt atgcgtgaat tgatcaatca
     4381 aaagaagcaa gaactttata aaaagtcagg tcaaaatcct gaaatcaacc gtaaaattga
     4441 agaagttcgc aacttggaat atcaaatccg tgaagaatca gccaaaatgg aatcgtatca
     4501 acgtttgacg gaagaacatg aaaaagcgtc acgacgtctt gacacattaa agcaaaacct
     4561 gagccaatta acagcactgt ttgaagaaaa gcaaaaagaa gtggctttaa tcgatcaagt
     4621 tcaagaatgg aaagggttag aagcggattt aaatattgaa ccgttagagt ttccagaaaa
     4681 agggattgat cgttatgaat tggcgaaagt tcaagtggat catctcgaac gtgacattgg
     4741 tttacgtgtt gaaaagcaac aacaattgca aaatgagaat tcacagttgt atgtgcctga
     4801 aaaatcactt tatcaaaact ttgaatctat cgcgaaacaa gaagaccgag tgaaacagca
     4861 agacatggaa ttgaaacaga atgagcgaga attcaatcaa catgagatgg aaattaaaag
     4921 tttgaagtct catatcggct ggaaagagct acatgatgat gtcgattcga gcgaagcaca
     4981 aaaaagcttt gcgagtgaga cgttaaagca aaagcaagag catctacaaa cgattcaaca
     5041 attgaaaaag acgcaagatg actatcaaat tgaaacggtg tcttttgagg aagaattgga
     5101 acatttaagt agtcagttgg ttgatgatga aaacttcgaa aagaaaaaag tctatgacca
     5161 acgattgtta gaattaaaag aaaagcgcaa tctgtttgat aagatgaaga cttcttttga
     5221 acaagaagca gaacaaaagg cacagcaaca acgtcgtgtt agaggggcat cattcttcct
     5281 tgcgatcatc tctattgcgt ttgccatctg gatgttcgtc acagaagcga tggtggcagg
     5341 tattgtgtta actgtcatgg ccattgtgtt tatcattggg atgacattat tccgttctaa
     5401 accagtcgga tatgatacgc aattttctga agaacttgcc caactcgaac aagaagtcga
     5461 acagttagaa gcggaatatg atttagactt tgatttatcg acacaatatc agttgcgtga
     5521 tcaaattgcg caacgtcaac aacaattggc aattttaaaa acaaaaacgc aacatgcaaa
     5581 gacacaatat gaagatacac agacggcatg ggcagatgcg acgagcaagt tacaacaatt
     5641 gaaagcatca cttcacttgt ctgaaaactt gtcagatgaa ctgctcgtcg atgcgataca
     5701 gacaattcaa atgatcaaag accatcaaca atatattgaa aagttgcatg aagcctactt
     5761 aaaattaagt gaatcattag aatcatttta tactgaagtg aatgacaaaa ttggttcagt
     5821 atttcaagag attgatagaa acactctgtt ccatgatgtg cgagaatggt taaaaacaac
     5881 gagtcgagat atgacgcgtc atgaacataa tacggaacaa ttaaacttgt tagaaaatga
     5941 gctgaaacat ttgaagcatc gtttaaatga aaatcatcaa gaaattcaga cattattcgg
     6001 tgcgattggc gcgttagatg aggaaagtta ttacaaacat cacgaacgct atcaacgcta
     6061 ccatgaacgt ttagcacgtt ttaatgactt aacacacttc ctggataacc aaaactacgg
     6121 ctatgaaaag agttctaaat taagtgagaa aacaacagcc caacttgatg aagaatatca
     6181 aaagttgtct gaacaaattg atgcttacaa tgagcgcttt ttggaatcac aaagcgaagt
     6241 gagcgactta ttagcgcaaa tgaaccatat ggaaacggat gatactttga gacatttacg
     6301 ccatcaatat caacttttaa gaaatcaatt gaatgaaagt gctgaagatt gggcggcgtt
     6361 aagctatctc gaagcattag tagatgaaca tattaaacaa attaaagata aacgattgcc
     6421 gcaagttgta aatattgcaa cagatattta taatgattta acgagtggtc aatatgtaca
     6481 agtaacttat gcgaatgagc aagtgatggt gcgtcaccaa gatggccaaa tgtaccatcc
     6541 cattgaattg agccagtcga caaaagagtt gctttacatt gcactccgct taagcctgat
     6601 tcatacatta aagccgtact attcgttacc gattattatc gatgacgctt ttgtacactt
     6661 tgatgctgaa cgcagagcga aaatgatgaa atatttaagg ggcatgtctg aagagtatca
     6721 aattctttac tttacatgtt cgcgtgatac caatattcca gcaaaacagc ttgtcacgct
     6781 aaataagata gataaataga atgggaaggc gttaaaaatg agaaatattg aaaagctaca
     6841 acctggagac acggtggatc acttttttct catccatcgt gcgactcaag gcgtaactgc
     6901 gcaaggtaaa gattatatga cgcttcactt acaagataaa agtggagaag tagaagcgaa
     6961 agtttggacc attacaaaag aaggtatgaa ccaattgaag cctgaacgta ttgtgcacat
     7021 taaaggcgat atgatcaatt accgtggtcg caaacaaatg aaagtgaatc aatttcgagt
     7081 tgcgactgaa gaagacgggt tacgtacaca agattttatc gatggggcac cgatgtctcc
     7141 tgaagaaatc aaggatgcga tgcaagatta cattttcgaa attgacaatg caccgctaca
     7201 acgtgtaacg cgttatttat tgaataaaca tgaagagagt tatttcgtgt atccagccgc
     7261 aagtacacat caccacaact ttgtcagtgg tttaagttat cacgtattga caatgttaga
     7321 aattgctcgt caattatgta tcatttatcc agaactgaac aaaagtttat tgtacagcgg
     7381 tattatttta catgacatgg gcaaggtgag agaactgtct ggtccgattg cgacatcata
     7441 cacattggaa gggaatttac tcggtcatat ttcaatcgcg agtgatgaag tggcagatgc
     7501 agcgcgtgag ttgaatgtag atggggaaga gattttgtta ctccgtcatc tcattttgtc
     7561 acatcatggt aaattggaat atggctcacc gaaattacct tatgtgaaag aagcggaaat
     7621 tttaaacttt attgataaca ttgatgcacg tatgaatatg tttgaaaaag cgtttaagaa
     7681 gattgataaa ggtcaattta cagagcgcat tttcggttta gaaggacgtc aattttataa
     7741 gcctgaaaag ttggattaat caatgaatgt tttgaaacat ttatgtatgg tgtttcaata
     7801 acattgcact cgattctcgt ttgattcgtt gtttttccaa agtaaaatca tgtgataaag
     7861 cgattttcgg gtgaaagtaa cgcaagtaag tgtaaagggc atcaaaaagg tgcgggaact
     7921 gaaagagttg tcccgcacct ttcctttttt gacatttgtt tctcgcaatt acatgcctag
     7981 ttgaccgtct tgtgatgatt gttttttcaa cgcatctgga tttaaaatat tatcctcgat
     8041 ggctttcttc acatcacgat ctttataatc aacgttatat tcgtcaagta aatctttata
     8101 agcatctgtt aagattttag ggtcttcttg taatttgttt tgaataattt tttcttttag
     8161 tttagatttc tctttatcaa aatcatcttc tttatctgca cgaatgatat ggtaaccata
     8221 ttccgtttta acgacatctg agatttggcc ttctttcaat ttgaacagtg cttcttcaaa
     8281 cggtttaacc atttgtcctt taatgacata acctaagcta ccatttttat cttttgttga
     8341 atccattgac tcttcttttg cgattttgtc gaagtcttta ggatttttat cgagtttctc
     8401 tttaatttca tcaattttct tcttagcatc tttgtcagat aagccttctt tatcgtcttt
     8461 atcttgtttc actttaatta aaa
//
LOCUS       DANHPA010000104         8211 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.104, whole genome shotgun sequence.
ACCESSION   DANHPA010000104 DANHPA010000000
VERSION     DANHPA010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 8211)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8211)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8211
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.104"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            83..1126
                     /locus_tag="PTC28_002030"
     CDS             83..1126
                     /locus_tag="PTC28_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HDK5717276.1"
                     /translation="MKALVYRGPGKKEWIEVEKPQLQKPTDVIVKVVKTTICGTDLHI
                     LKGDVPAVTDGRILGHEGVGIVEEVGDSVTQFKKGDKVIISAVTACGSCYYCKKQLYA
                     HCEDGGWILGHLIDGTQAEYVRIPHADNSLHRVPDGANDEALVMLSDILPTSFEIGTL
                     SANVNPGDTVAIVGAGPIGLAAVLTAQFYSPAEIIMIDLDDNRLQAAKDLGATASINS
                     SSENVLERIHELTGGRGVDVAMEAVGIPATFELCQKIISPGARIANIGVHGTKVDLHL
                     EELWIKNISITTGLVSGYSTPLLLKTVESGKVQPEKLITHHFEMDDMLEAYEVFGNAA
                     QEGTLKVIISNDK"
     gene            complement(1256..1981)
                     /locus_tag="PTC28_002031"
     CDS             complement(1256..1981)
                     /locus_tag="PTC28_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3169 family protein"
                     /protein_id="HDK5717277.1"
                     /translation="MKVWRYLSFVLLGGIVGVFVSLLISGIDFQHLIEHIDFMDQQFM
                     VISCVIVTLCIIGLTLWQYQTQKAALKLKSRVDHQTEIEETDTLENQANMKFLKVSII
                     VYVQYFISFVYFFILALGNQGDKALITVLIPFLFTIIPAIMVGFFQRKFDRRFPKMGE
                     AKYTEKTFEMMDEGERHITVVSLYKVYHMNLSLIIIGVVLLSFFSLVTGINQFLGILF
                     MIVLFAYNTFGYLWKVSRFYREG"
     gene            complement(1978..2181)
                     /locus_tag="PTC28_002032"
     CDS             complement(1978..2181)
                     /locus_tag="PTC28_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017636694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDK5717278.1"
                     /translation="MKNRLKELRARDGYNQTQLAKKAGISRQTVSLIERNGFTPSILT
                     AIKIARIFGEPVENVFIIEEEDL"
     gene            complement(2443..3210)
                     /locus_tag="PTC28_002033"
     CDS             complement(2443..3210)
                     /locus_tag="PTC28_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HDK5717279.1"
                     /translation="MAEYTPIKTVIQTFEILDILSQHQKMGVSEMARLTMLPKSTIYR
                     HLRTLVDLNVVAQDKDENYYLGYKMLKYQNHMKQTDSLIHHLKPFMRRLVEKTGEAIN
                     LGILVNQEVCILHTEYGEQYTLQAQLGPTSMLHCSGMGKWFLNTFSDEALETYFKTAT
                     SRTIHTVTTAKAFKYDMATRPHQDIVVDREEYEYGLMCIATSIRDESGVIQASMSISG
                     PVSRLEHKGLDVMQETLLEEATKASNYLQDIGYWISR"
     gene            complement(3241..4599)
                     /locus_tag="PTC28_002034"
     CDS             complement(3241..4599)
                     /locus_tag="PTC28_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine transporter"
                     /protein_id="HDK5717280.1"
                     /translation="MKNNLQQPTTDKVDMKNLIKFIVATLLGIIIVLIPFSFASGVDT
                     ILFHVIKTFVSTFQGPITWLIALVFCISAVMAVIDQIWQPDWIRNNTTLKPLFSTTPF
                     YTVNRILGTLITLMCLFQVGPLFLTSEETGMTMVNLAVQLSVIVPIMLLFQTLILEFG
                     AMEFIGELIGFLIKPVFKISEICAVSAISAWVGPGNAAILASKELFEKGYYTVKETAI
                     LGSQFSTSSIGWVVLVCSVLGVVDDFGMIFLGITVIGMIVAFICVRIPPISRYPDVYV
                     DGTPLKEVQTATQLSKLKIATTQATERAAKVTAHNFISKKDNMMFYVVWLMPIIVCWG
                     TLALAISVYTPLLAWVSYPVQWILQVAGIPEAAVTASAIMSGFADNYLPVILGANLTE
                     STSKVVIAMMSILQLIFLSEIATLLTSANALQKFSHIVIIFLQRTFIALPFVIVFVKL
                     FF"
     gene            complement(4634..5566)
                     /locus_tag="PTC28_002035"
     CDS             complement(4634..5566)
                     /locus_tag="PTC28_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate dehydrogenase"
                     /protein_id="HDK5717281.1"
                     /translation="MSKVSIIGAGAVGSTAAYLLSETPWVKEVVLVDVDRDRAQGQAL
                     DMMHGVGVSQAKRVIAGEYEATQGSDVIIITIGVPEKVGESRLIPLQKNADILKEIVP
                     KMTAYSPNAKIVTVSNPVDILAYTTYQISGKAPSDVIGLGTLLDTSRLKYLLSDYFNV
                     SPKSIEATVVGEHGDSQVVLWRHVRIGGLPLEAFAASQNMMLPDDFKETMAQRVKDTA
                     FDVWKMKGPNCYCVANAIQCLVEALLSPERRILPVSNLYTTSTGLTVYISLPSIVSEQ
                     GVEQMLPELLNAEEEAQLNASCAVMHDYIQQLTL"
     gene            complement(6007..8067)
                     /locus_tag="PTC28_002036"
     CDS             complement(6007..8067)
                     /locus_tag="PTC28_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit IIABC"
                     /protein_id="HDK5717282.1"
                     /translation="MFKLFFGQLQRVGKALMLPVAILPAAGILLALGNAMHNEQLVSL
                     APWLKHEVFVILSTIMESAGQVVFDNLPLLFAVGTALGLAGGDGVAALAALVGYLIMN
                     ATIGKVMHISIDQIFSFTDGAKTLSQANKLPQHALILGIPTLQTGVFGGIIMGALAAW
                     CYNKFYNITLPQFLGFFAGKRFVPIVTSLVAIVTGVVLAFVWPPIQEGLNDLSNFLLN
                     KNLVLTTFIFGIIERSLIPFGLHHIFYAPFWFEFGSYVNQAGEVVRGDQRIWMAQMKD
                     GVEFTAGAFTTGKYPFMMFGLPAAAYAIYRQARPERKKIVGGLMLSAALTSFLTGITE
                     PLEFSFLFVAPILYVLHVLLAGTSFLVMHLLDVKIGMTFSGGFIDYILYGLLNWDRTH
                     ALYVIPVGIVYAIIYYFLFTFVIKHMNLKTPGREDEVAETRDTSVERLPFDVLDAMGG
                     KDNVKHLDACITRLRVEVLDKAKVDVNALKELGAAGVLEVGNNMQAIFGPKSDQIKHD
                     MALIMKGEITSPSQTTVSEEDEAVHIDGSRSVTIVAPCDGEVIPLSEVPDQVFSGGMM
                     GDGVGFIPRQSEIVAPFHGKVKALFPTKHAIGIESTDGVELLIHIGIDTVKLNGEGFE
                     SFVKVGDEVAEGQLLMKVDLEYLQQHAPSIVTPMIVTNLGERQIEVEDVKEVEKGQRV
                     FTVL"
BASE COUNT         2601 a         1789 c         1416 g         2405 t
ORIGIN      
        1 tataaatttt tcgcactatt attgacttaa tttatagaat agtgcgaaaa taaagataga
       61 tatcctgggg aggaatgtta aaatgaaagc acttgtttat cgtggtcctg gaaaaaaaga
      121 atggatcgaa gttgaaaagc cacaattgca aaagccaaca gacgttattg ttaaagtagt
      181 gaagacaaca atttgcggaa ctgacttaca cattttaaaa ggtgacgtcc ctgctgtaac
      241 tgatggtcgt attttagggc acgaaggtgt agggattgtt gaagaagtgg gcgattcagt
      301 aacacaattt aaaaaaggag acaaagtgat tatttcagcg gtgacagctt gtggatcatg
      361 ttactactgt aaaaagcaac tttatgcgca ctgtgaagat ggtggctgga ttttaggtca
      421 cttgattgat ggtacgcaag ctgagtatgt gcgtattcca catgcagaca acagtttaca
      481 ccgtgtgcca gatggtgcga atgacgaagc gcttgttatg ctgagtgata tcttaccaac
      541 aagttttgaa attggtacat taagcgcgaa cgttaaccct ggtgacactg ttgcgattgt
      601 aggtgcaggt ccaatcggtt tggctgctgt tctcactgca caattctact cacctgctga
      661 gattattatg attgaccttg atgacaatcg tttacaagct gctaaagatt taggtgcaac
      721 agcttctatc aacagtagta gcgaaaatgt cctcgaacgc attcatgaat taactggtgg
      781 acgtggtgtc gatgtcgcaa tggaagcagt ggggatccca gcaacattcg aattatgtca
      841 aaaaattatt agccctggtg cccgtattgc taacattggt gttcacggta caaaggttga
      901 tttacacctt gaagaattat ggattaaaaa tatctctatt acaacaggtc ttgtaagtgg
      961 atactctaca ccactcttac taaaaactgt agagtcgggt aaagtgcaac ctgaaaagct
     1021 tattacgcac cacttcgaaa tggatgacat gttagaagcc tatgaagtgt ttggcaatgc
     1081 cgctcaagaa ggcacattaa aagtgattat ttctaacgac aaatagactg acattctttt
     1141 acattcaaaa taaaaagagt aaggacatgc acttcatgtg tcgtctttac tcttttcatt
     1201 ttcaaccact tcaactgtgc cggtagtgtt cgggtagaca tcccgcacac tgcctttacc
     1261 cctctcgata aaatcggctc actttccata aataaccgaa tgtattgtaa gcaaacaata
     1321 caatcatgaa caaaatacct aaaaactgat tgatacctgt cactaaagaa aagaatgaga
     1381 gcaatacaac accgatgata atgagtgata aattcatatg atacaccttg tagagtgaca
     1441 ctacagtaat atgacgctcc ccttcatcca tcatttcaaa agttttttcc gtatattttg
     1501 cctcccccat ttttggaaag cgacgatcaa actttctttg gaaaaaaccg accatgattg
     1561 ctgggataat cgtaaaaaga aatgggatca atactgttat taatgcctta tccccttgat
     1621 tccctaacgc taggatgaaa aagtaaacaa aactaatgaa atattgtacg taaacgatga
     1681 tactgacttt taaaaatttc atattcgctt ggttttctag tgtatcagtt tcctcaattt
     1741 ctgtctgatg atctacgcga gacttcagtt ttaatgctgc tttttgtgtt tgatattgcc
     1801 ataatgtcag cccaatgata catagcgtga cgatgacaca tgatatcacc ataaattgtt
     1861 gatccataaa atcgatgtgc tcaatgagat gttgaaagtc tatcccactt attaataatg
     1921 aaacgaaaac accgacgata ccgccaagaa gtacaaacga taaataacgc catactttca
     1981 tagatcttcc tcctctatga taaagacatt ctctaccggt tctccaaata tacgcgcaat
     2041 tttaatcgcc gtgagtatcg aaggtgtaaa tccattgcgt tcgattaatg agaccgtttg
     2101 acgtgaaatg cctgcctttt tcgcgagttg tgtctggttg tagccgtcac gagcccgcag
     2161 ctccttcaac ctatttttca tgccttcaac tccttacttc attcaatata tatgctatta
     2221 gtcattttga caagcatgtt agtcaaagaa gaaacaatag catctatttt tacgtccaat
     2281 tctccttatt tttcgagagt ttaatcatca ttaatcgata taagtccata ataatgaaag
     2341 aaactgggaa aacttaatgt cccagtctct tatcactatt aaaatgacgt caaacatact
     2401 acacgatgaa ctgttttctt tattacaaat ggatgcaatc gctcatctcg atatccaata
     2461 accgatatct tgcaagtaat tactcgcttt tgttgcttct tcaaggagcg tttcttgcat
     2521 cacatccaat cctttatgtt ctaagcgact gactggccct gaaatactca tcgaagcctg
     2581 aataacgcct gattcatctc taatcgatgt cgctatacac atcaaaccgt attcatattc
     2641 ttcacgatcg accacgatat cttggtgagg ccgcgtcgcc atatcatatt taaaagcttt
     2701 agccgttgtc accgtatgaa tcgtacgtga tgtcgccgtc ttaaaataag tttccaacgc
     2761 ctcatctgaa aatgtattta aaaaccattt tcccatccct gaacaatgca acattgatgt
     2821 aggaccgagt tgtgcttgta atgtatactg ttccccatat tccgtgtgca aaatacacac
     2881 ttcttgattg accaatatgc ccaaattaat cgcttctccg gttttttcca ccagccgacg
     2941 cataaacggc ttgagatggt gaatcaatga gtccgtttgc ttcatatgat tttgatattt
     3001 taacatttta taaccgaggt aataattttc atctttatct tgcgcaacga cattcaaatc
     3061 cactaaagtt cttaaatgac gataaatggt acttttcggt aacatcgtca atcgcgccat
     3121 ctcactgact cccatttttt gatgttggga caatatatct aaaatttcaa atgtttgaat
     3181 gacagtttta ataggcgtat attcggccac atcgattccc caccttttct gtgatttcat
     3241 ttagaagaac agtttcacaa atacgataac aaacggtaat gcaatgaaag tgcgttgtaa
     3301 gaaaataata acaatgtgcg aaaacttttg aagcgcattc gctgatgtga gcaacgttgc
     3361 aatttcggat aaaaagatca actgcaaaat actcatcatc gcaatcacga ctttacttgt
     3421 tgactctgtt aaatttgcac ctaaaatgac aggtaaatag ttatccgcaa agcctgacat
     3481 aattgcactc gctgtgacag ccgcttccgg tatgcctgcg acttgtaaaa tccattgaac
     3541 tgggtaagac acccaagcaa gtaacggtgt ataaacggaa atcgcaagtg ctaatgttcc
     3601 ccaacaaaca atgatgggca ttaaccaaac aacatagaac atcatattgt cttttttact
     3661 aataaagttg tgtgctgtca ctttcgctgc acgttcagtc gcttgtgtcg tcgctatttt
     3721 aagtttagat agttgcgttg ctgtttggac ttcttttaat ggtgtcccgt caacataaac
     3781 atctggataa cgagaaatag gcggaatacg tacacaaata aatgcaacaa tcatgccaat
     3841 cactgtaatc cctaagaaaa tcatgccgaa atcatcgaca acaccgagca cactacacac
     3901 gagaacgacc caaccaatac ttgatgtcga aaattgacta ccgagaatcg ccgtctcttt
     3961 cactgtataa tacccttttt caaacaattc cttagaagcc agtatcgccg cattccccgg
     4021 tccgacccaa gcactaattg cactgactgc acagatttca gagattttaa agaccggctt
     4081 aattaaaaat cctatgagtt caccgataaa ttccatcgca ccaaattcta aaatgagtgt
     4141 ttggaaaagc aacataatcg gaacaatgac agatagttga acggctaaat ttaccatcgt
     4201 catccctgtc tcttccgaag ttaaaaacaa tggtccaact tgaaataaac acattaaagt
     4261 aatcaacgta ccgagtatcc ggtttaccgt ataaaatggc gttgtcgaaa aaagaggttt
     4321 caacgtcgtg ttgttacgaa tccaatccgg ctgccaaatt tggtcaatca cggccattac
     4381 tgcactaata caaaaaacaa gcgcaatcaa ccaagtgatc ggtccttgaa acgttgaaac
     4441 aaaggtcttt atgacgtgaa ataaaattgt atcgacacca ctcgcaaaag aaaatggaat
     4501 gagtacaatg ataatcccta aaagtgtcgc aacaataaat ttaatcaagt ttttcatatc
     4561 tactttgtca gttgtcggtt gttgtaaatt atttttcatc atcaaaactt ccttgtcatt
     4621 ggtctttact tcattacaaa gtcaattgtt gaatatagtc atgcatcact gcgcacgaag
     4681 cgttcaattg tgcttcctct tctgcattca gtaattcagg aagcatttgt tcaacccctt
     4741 gttcactcac aatacttggt agactaatat aaactgtcaa acccgttgat gttgtatata
     4801 aattcgacac tggtaatata cgtcgttctg ggctcaacag tgcttctacc aaacattgaa
     4861 ttgcattcgc tacacaataa caattcggtc ctttcatttt ccatacatca aaagctgtat
     4921 ctttcacacg ttgtgccatc gtttctttga agtcatctgg taacatcata ttttgagatg
     4981 cggcaaatgc ctctaacggc agaccaccga tacggacatg acgccataag acgacttgcg
     5041 aatcaccatg ttccccgaca acagtcgctt caatactttt tggactcacg ttaaagtagt
     5101 cactcaacaa atatttcaga cgtgacgtat cgagcaatgt acctaaacca atgacatctg
     5161 aaggtgcctt accactgatc tgataagtcg tatacgctaa aatatcgacc ggattgctca
     5221 ctgttacgat tttggcattc ggactatacg ctgtcatttt cggcacaatt tcttttaaaa
     5281 tatctgcatt tttctgcagt ggaatcaggc gagactcccc tactttttcc ggtacgccaa
     5341 tcgtaataat aatgacatca gaaccttgtg tcgcttcata ttctcctgca atgacacgtt
     5401 tcgcttgtga tacaccgaca ccatgcatca tatctaacgc ttgcccttga gcccggtccc
     5461 gatccacatc gaccaacaca acctccttta cccatggcgt ttcagataac aaatacgcag
     5521 cagtcgaacc tactgcaccc gcaccaataa tactcacttt gctcatatca tttcaccctt
     5581 tcaaaatgga acgtgtttca tttttcgatt taagcatacc ccaaacttca tgacgaaaca
     5641 ataattttgt gaaataaatc acaaatatgt cacaacttaa aaaacaagcc ggtttggtcg
     5701 gtcaagttac gtattcatga gacttttggg gagacaaaag tagttgaatt tcgctgtaaa
     5761 tgaaagaggt gtggatactg tatatccaaa aatgaacata tccgtttaaa tgatgatata
     5821 ggaaagtgat aactgtgcat caagacaaat tgagttgaga catcagtcct tgagaaagag
     5881 aaaaagcgtc aaagcaatct atttatcatc aatccaaaac atttgtgttc aaaatacaca
     5941 aaaaaggtgc cctatcagca tttacacaaa cactgataca gcacctacta tcattcacac
     6001 taactgttat aaaacagtga atactctttg acctttctca acttccttaa cgtcttctac
     6061 ttcaatttga cgctctccta agtttgtcac aatcatcggc gtcacaatac ttggcgcatg
     6121 ttgttgcaga tattctaaat ccactttcat caacaattga ccttccgcca cttcatcgcc
     6181 gactttaacg aaactttcaa agccttctcc atttaatttc actgtatcaa taccgatatg
     6241 gatcagcaat tctaccccgt ctgttgattc aataccaata gcatgttttg ttgggaataa
     6301 ggctttcact ttaccatgga atggcgcgac aatttcagac tgacgtggga taaagcccac
     6361 accgtcaccc atcataccgc ctgaaaagac ttgatcaggc acttctgata acggtatcac
     6421 ttctccgtca catggcgcaa caatcgtcac acttctcgaa ccatcaatat gcacagcttc
     6481 atcttcctca gagaccgtcg tttgactcgg actcgtaatc tcacctttca taatgagtgc
     6541 catgtcatgc ttaatttgat cagatttcgg tccaaaaatg gcttgcatgt tgttgccgac
     6601 ttcaagcaca cctgcggcac ctaattcttt caatgcgttc acatcaactt ttgctttgtc
     6661 caaaacttcg acacggagac gcgtaataca tgcatctaaa tgtttcacgt tgtctttacc
     6721 acccatcgca tcaagcacat caaatggtaa gcgctcaact gacgtatctc tcgtctctgc
     6781 aacttcatct tcacgaccag gcgtttttaa attcatatgc ttgatgacaa aagtaaataa
     6841 gaagtagtaa atgatagcgt aaacaatacc tactggaatc acgtataagg catgggtgcg
     6901 atcccaattc agtaaaccat ataaaatata atcaataaaa ccacctgaga atgtcattcc
     6961 aatcttaaca tctaataaat gcatgactaa gaaagatgtc cctgctaaca atacgtgtaa
     7021 tacgtataaa atcggtgcaa caaataagaa tgagaactct aatggttctg taatacctgt
     7081 taaaaatgat gttaatgccg cggataacat caaaccacca acaatctttt tacgctctgg
     7141 tcgcgcttgt cgataaatcg catatgctgc cgctggtaaa ccaaacatca tgaatggata
     7201 tttacctgtt gtgaaagcac cggctgtaaa ttcgacgcca tctttcattt gtgccatcca
     7261 aatacgttga tctcctcgaa ccacttcacc agcttgattc acgtatgagc caaattcaaa
     7321 ccagaatggc gcatagaaaa tgtgatgtaa accaaatgga atcaacgaac gttcaataat
     7381 tccaaaaata aatgtcgtta atacaaggtt tttgtttaat aagaagtttg ataaatcatt
     7441 aaggccttct tgaatcggtg gccaaacaaa tgccaacaca acccccgtaa caatcgcaac
     7501 caatgatgtc acaatcggta caaaacgttt accagcaaaa aaacctaaaa actgtggtaa
     7561 tgtaatgtta taaaatttgt tgtaacacca tgctgctaac gcccccataa tgataccgcc
     7621 gaatacacct gtttgtaatg ttgggatacc tagtatcaag gcatgctgtg gtaacttatt
     7681 cgcttgactt aatgtttttg cgccatcagt aaaagaaaag atttgatcga tactaatatg
     7741 cattacttta cctatcgttg cattcataat taagtaaccg accaatgctg ctaatgctgc
     7801 gacaccatca ccgcctgcta aacctaatgc tgtccccact gcaaaaagta aaggtaaatt
     7861 atcgaatacc acttgacctg ctgattccat aattgtagaa agaatgacaa atacttcatg
     7921 cttcaaccat ggtgccaagg atacgagttg ctcattgtgc atggcattac ctagtgcaag
     7981 taaaattccg gcagccggca aaatggcaac cggaagcatt aacgccttcc ctactctttg
     8041 taactgtcca aaaaaaagtt taaaaatcat taaaacaccc ctttaaaatc attgagtcat
     8101 ataaaaaggc atgagcaaat aaaaccgtta taaaacagtt tctttttgct catgcctgat
     8161 tatcagtaac acgctttata tcgaattaac tttattgtat tacattgaag t
//
LOCUS       DANHPA010000105         7856 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.105, whole genome shotgun sequence.
ACCESSION   DANHPA010000105 DANHPA010000000
VERSION     DANHPA010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 7856)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7856)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7856
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.105"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..447
                     /locus_tag="PTC28_002037"
     CDS             <1..447
                     /locus_tag="PTC28_002037"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717283.1"
                     /translation="VMAPYLDNSEVQASEQKDKYGELHKINESEANIVLEKGYTYKVK
                     SNGTATLTKTATGETKELPTSAKDKNGKDVIISYEDTDKGLKLMVIDASKATQTRGWK
                     GALKCGLGTAGGAGTVALGGFGVGGPGGAVVGAIAGGMSGAAASCF"
     gene            461..646
                     /locus_tag="PTC28_002038"
     CDS             461..646
                     /locus_tag="PTC28_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717284.1"
                     /translation="MFEKPQMAHNEIFNIVLIVIGILAFVLFYFVFDAGYLLSFIIAF
                     VPIIVGIINLKEIRKKN"
     gene            1114..2229
                     /locus_tag="PTC28_002039"
     CDS             1114..2229
                     /locus_tag="PTC28_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HDK5717285.1"
                     /translation="MKIGIVKELKPGEGRVGCTPENAKILKDQGHEVFVEHNAGIGSG
                     FTNEAYENAGAILVSHEKCWEADLIIKVKEPHESEFQYFKKGQVIWGFQHLASSKKTV
                     EMMQQAGVTAIGGETIEHDGKAILLEPMSAIAGRRSMLMGAYYLEAQHQGEGILISGI
                     DAISGIPSGKVVIFGGGSAGVNAATIALGLQAEVVIIELKDERIAWLESHFKNDNVTV
                     VKSNEANLAREIQTADVFISTILIPGSKPPKLVTKDMVRSMKKGSVLVDIAIDQGGTV
                     ESIRPTTISDPIYVEDGVIHYAVPNQPGAVPRTSTMVLAAGNINFLSEISNKGIERAI
                     QDNPVLASGVNIYQGHITNQGLAQSHDMPYEKLADLI"
     gene            2266..3306
                     /gene="tdcB"
                     /locus_tag="PTC28_002040"
     CDS             2266..3306
                     /gene="tdcB"
                     /locus_tag="PTC28_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016425924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional threonine ammonia-lyase/L-serine
                     ammonia-lyase TdcB"
                     /protein_id="HDK5717286.1"
                     /translation="MATNAVMIQTEKYCNIHDIKEAKMKIQDYVRETPLIKSMFLSNN
                     ITGGNVYLKLENMQYTGSFKFRGALNKILHLTDEQKAKGIITASAGNHAQGLALTGQL
                     LGIDATVVMPEEAPISKQEATRGYGAEVILKGETFNDSRLYMEQLAAETGKTIVHPYD
                     DVEVMAGQGTIGLEILDQIWDIDTVVVPVGGGGLIAGLATALKSFNPSIHIIGVQSEN
                     VHGMAESIKEGQITSQFTAHTIADGTEVTIPGNKTYAVVEKLVDEFVLVSEDEIANAM
                     RHLMQRTKIITEGAGALPTAALLSGKIDPRWIKGKNIVALVSGGNVDLTRVSHIIDDL
                     LKPADTSEGVVG"
     gene            3339..4661
                     /locus_tag="PTC28_002041"
     CDS             3339..4661
                     /locus_tag="PTC28_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDK5717287.1"
                     /translation="MSTNTSLKKNIGFFASLSLVMGSVIGAGVFFKASSVTEVTGSTS
                     MALFVWLLGGIMTICAGLTGAELAAAIPETGGLTKYIEYTYGDFWGFLSGWAQAFIYF
                     PANIAALAIIFGTQIINLFHLSTALLLPIAILSAVSILLINFLGSKAGGTLQSITLVI
                     KLIPIALIVIIGFFHSSDVSFSLFPVVNGTNSSWFEAIGAGLLATMFAYDGWIHVGNI
                     AGEMKNPKKDLPGAITLGIGLVMVVYLLINATFLMTLPIHQIEGNLNAASEASSILFG
                     AGGGKLVTIGILISVYGTMNGYTMTGMRIPYAMAERNQLPLKRLFLDLLPSRTPWLGG
                     MIQIVIAVIMMLLGAFDTITNMLIFVIWTFYCMAFLAVFLLRKREPELHRPYKVPLYP
                     VIPMIALLAGTFVLLNTLLTQPLLAITGIGVTMLGIPIYYYQKKTLKI"
     gene            4884..6932
                     /locus_tag="PTC28_002042"
     CDS             4884..6932
                     /locus_tag="PTC28_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000069452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HDK5717288.1"
                     /translation="MKNNQEHHHHQHVHESHHPHSHHMHHDDHAHHHHENFKMKFFVS
                     LIFAIPIIIFSPMMGVQLPFQFTFPGSDWMVLILATILFIYGGQPFLVGAKGEITSKK
                     PGMMTLVTLGISVAYIYSLYAFYLNHFSDATGHTMDFFWELATLILIMLLGHWVEMNA
                     VGSAGDALKKMAALLPDKVIKVTNNQREEVKISDIALNDIVEVKAGESIPTDGMIVRG
                     ETAIDESLVTGESKKVQKKPNDQVIGGSINGSGTIQVKVTAVGEASYLSQVMDIIKQA
                     QNDKSRAELLSDKVAGYLFYFAISVGMIAFIIWMLIDNHIDFALERLVTVLVIACPHA
                     LGLAIPLVTARSTSIGAHHGLMIKNRSAIETAQHIDYVMMDKTGTLTEGHFSVNHYES
                     FKAGMSDEAVLSLFASLESQSNHPLATSIVGFAKSKNIAYAQPQDVQNISGIGLEGKV
                     GDQSYKITNVTYLEQNGFDYDQALFTKLAQQGNSISYLIDEQQVIGIIAQGDQIKDSS
                     QQMVADLLAKGITPVMLTGDNQEVAETVAKALGINDVHAQLMPEDKESIIKAYQSKGK
                     KVMMVGDGINDAPSLIRSDIGIAIGAGTDVAVDSGDVILVKSDPSDIIHFFTLSKRTM
                     RKMVQNLWWGAGYNIVAVPLAAGILASIGLILSPAVGAILMSLSTVIVAINAFTLKLE
                     "
     gene            7115..7687
                     /locus_tag="PTC28_002043"
     CDS             7115..7687
                     /locus_tag="PTC28_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDK5717289.1"
                     /translation="MDVGNQIRIYRKERQLSQMALAEKIDVSTQTISNWENERTYPDL
                     YHLIVLSSLFNVSLDQLVKGDVVEMKNIIDHYNMDRYGKLMLVFMLIAVISVGPVLKF
                     SDGWYGLFIPFIFWAFSMYYAIKIERLKKKYDVKTYKEIVDYMEYGAKTYNDTREKKK
                     LLIEETLIVVVFVAVSVVLMLGSLFLFNLF"
BASE COUNT         2417 a         1279 c         1746 g         2414 t
ORIGIN      
        1 gtaatggcac catatttaga taacagtgag gtacaagctt cagaacagaa agataaatat
       61 ggggaacttc ataaaattaa cgaatctgag gctaatatag ttttagaaaa agggtataca
      121 tataaagtaa aaagcaatgg cactgctact ttaacaaaaa ctgctactgg agaaacaaaa
      181 gaattgccaa catctgcaaa agataaaaat ggtaaagatg taataataag ttatgaagat
      241 acagacaaag gtctaaagtt aatggtgatt gatgctagta aagctacgca aacgcgtggg
      301 tggaaaggtg cattaaaatg cggtttaggt actgctggtg gagcaggaac agttgcatta
      361 ggtggatttg gtgttggtgg tcctggtggt gctgtggtag gtgctatagc tggtggaatg
      421 tccggtgctg cagcaagttg tttctaagga ggtatgaaga atgtttgaaa agcctcaaat
      481 ggcccataat gaaattttta atattgtatt aatcgttata ggaattcttg catttgtgct
      541 attttacttt gtttttgatg cagggtattt gttaagtttt atcattgcat ttgtaccgat
      601 tattgtaggt atcattaatt tgaaagaaat aagaaagaaa aattaagttc aaagcgatct
      661 tttgataggt cgctttttat tttgcgttag cacgatgcac ccaaatcttg tttcttaaat
      721 cgacgactac ccatgaattt ttgagttact gtcaacgcct gtaacgatga tgctatctag
      781 agaataagac tccccttaga ctgcctcgtc tatatagcag tatatgcctc agcgtttatc
      841 gtatggtcga tgtatctagt tgcatacaat cctctcaata acaataaaac gccaaaaaag
      901 tgacaatatt cggattgttt taacaatatt ttcattttga atttattgca ttttcgattg
      961 actttgtttc agtttgaagc taacataatt agtgaattaa ttcacaaact ctatagctat
     1021 agacacttca taatgctttt ttaattttta aataagattg atttgatatc aaaattaaaa
     1081 gcaatttcaa tcacctaatg aggagtgttt gttatgaaaa ttggtattgt taaagaatta
     1141 aagccgggtg aaggacgcgt aggttgtaca cctgagaatg ctaaaattct taaagatcaa
     1201 ggacatgaag tcttcgtaga acacaatgca ggtataggct ctggatttac gaatgaagcc
     1261 tatgaaaatg caggtgcgat acttgtttca catgaaaagt gttgggaagc ggatttaatt
     1321 attaaagtga aagagcctca cgaaagcgaa ttccaatatt tcaaaaaagg ccaagtgatt
     1381 tggggcttcc aacatttggc gtcatctaaa aagacggttg agatgatgca gcaagcgggt
     1441 gtgacagcga ttggtggcga aacaatcgaa cacgacggga aagccatttt attagagccg
     1501 atgagcgcaa ttgctgggcg ccgttcgatg ttaatgggtg cgtattactt ggaggcacaa
     1561 catcaaggtg aagggatttt gatttctggt attgatgcga tttcggggat tccgtctggt
     1621 aaagtcgtca ttttcggtgg aggttctgcg ggtgtcaatg cggcgacgat tgcgttaggt
     1681 ttacaagcag aagtcgtcat catcgaatta aaagatgaac gtattgcttg gctcgaatcg
     1741 cattttaaaa atgacaatgt gactgttgtg aaatcgaacg aagccaattt agcgcgagaa
     1801 atccaaacag cagatgtgtt tatttcaacg attctcattc caggatctaa accacctaaa
     1861 ttggtcacta aagatatggt acgtagcatg aaaaaaggtt cagtgcttgt agatattgcg
     1921 attgatcaag gcggaacggt tgaaagtatt cgtccaacaa caattagtga tccgatttac
     1981 gttgaagacg gcgtcatcca ttatgcggtg ccgaatcaac ccggtgctgt accacgcacg
     2041 tctacaatgg tgttggctgc gggtaacatt aactttttat ctgaaattag caacaaaggt
     2101 atcgaacgcg caattcaaga caatccagtc ttagcctctg gtgtgaatat ttatcaagga
     2161 cacattacaa atcaaggttt ggcacaatcc catgatatgc cttatgaaaa gttagcagac
     2221 ttaatctagt tcgtacaata tcaatttgaa aagaggatga tcgtgatggc aacaaatgct
     2281 gtaatgatac aaactgaaaa atattgtaat atccatgaca ttaaagaagc taaaatgaaa
     2341 attcaagatt atgtacggga aacaccgctt attaaatcaa tgtttttaag taataatatt
     2401 acaggtggca atgtttattt aaaacttgag aacatgcaat acaccggatc tttcaaattt
     2461 agaggtgcac ttaataaaat tttacactta acagatgaac aaaaagcaaa agggattatc
     2521 actgcttcag cgggtaatca tgcgcaaggt ctcgcattga ctggacaact gctcggtatt
     2581 gatgcaacgg tcgtcatgcc tgaagaagca ccgatttcta aacaagaagc gacacgtggt
     2641 tatggtgcgg aggtcattct taaaggagaa acgtttaatg actctcgtct gtatatggaa
     2701 caactggctg cggaaacagg taaaacgatt gtacaccctt atgatgatgt tgaggtgatg
     2761 gccggccaag gaacgattgg cttagaaata ttagaccaaa tctgggacat tgatacagta
     2821 gtagtacctg ttggtggtgg tggattgatt gctggcttag caacagcttt aaaatcattt
     2881 aatccatcta ttcatattat cggtgtgcaa tctgaaaatg ttcacggtat ggcagaatcg
     2941 attaaagaag gccaaattac gtcacaattt acagcacata ccattgcaga tggcacggaa
     3001 gtcaccattc ctggtaataa aacatatgct gttgttgaaa aattagtcga tgaatttgta
     3061 ttagtttcag aagatgaaat tgcaaatgcc atgcgtcatt taatgcaacg gactaaaatc
     3121 attactgaag gtgcaggcgc attaccaact gctgcactat taagtggtaa aatcgaccca
     3181 cgttggatta aaggcaaaaa tattgtcgct ttagtatcag gggggaatgt tgacctcaca
     3241 cgtgtttcac atattattga tgatttattg aaacccgctg atacgagtga aggtgtggtc
     3301 ggttagccca tctgagaaat gaaatggagg caacggcaat gagtacaaat acatctctaa
     3361 agaaaaacat cggctttttt gcatcgcttt cacttgttat gggatcggtt attggcgcag
     3421 gtgtcttctt caaagcttca agtgtaacgg aagtgaccgg ttcaacgagt atggcacttt
     3481 ttgtttggct gcttggcggt atcatgacca tttgtgccgg tttgaccggt gctgaacttg
     3541 ctgcagccat tcctgaaact ggcggactca ctaagtatat cgaatacact tatggagact
     3601 tttggggatt tttatcaggc tgggcacaag cgtttattta ctttccagct aacattgcag
     3661 ctttagccat tatttttgga acgcaaatca ttaatttatt tcatttatcg acagcattgt
     3721 tacttcccat tgcaatcctg agtgccgttt cgatattact gattaacttt ttaggttcta
     3781 aagcaggcgg aactttacaa tccattacgc ttgtgattaa gttaatccct attgcactca
     3841 ttgtcattat cggcttcttt cattcgagtg acgtatcatt ttctctcttt cccgttgtga
     3901 atggtacaaa ttcgagttgg tttgaagcga ttggtgcagg tcttcttgcg acaatgtttg
     3961 cgtatgacgg ttggattcat gtcggtaata ttgccgggga aatgaaaaac cctaaaaaag
     4021 acttaccagg cgccattacg ctcggtatcg gtttggtcat ggttgtttac ttactgatta
     4081 atgcgacgtt tttaatgaca ctgccgattc accaaattga aggtaacttg aacgccgcaa
     4141 gcgaagcatc ttcaatttta tttggtgcag gcggtggaaa attagtcacg attggtattt
     4201 taatatctgt atatggcacc atgaacggct atacaatgac tggtatgcgt attccttatg
     4261 ccatggcaga acgtaatcaa ctgccactca agcgcttatt tttagactta ttgccttcac
     4321 ggacaccatg gctcggtggc atgattcaaa ttgtcatcgc agtgatcatg atgctattag
     4381 gtgcttttga cacgattacg aatatgttga tatttgtcat atggacattt tattgtatgg
     4441 ctttcttagc ggtatttctt cttagaaaaa gggagccaga attacaccgt ccatataaag
     4501 tcccgttgta tcccgtcata cctatgattg cattactagc aggcacgttt gtcttgctga
     4561 atacattatt gacacagccc ctccttgcaa tcacgggtat cggggtcaca atgttaggta
     4621 ttccgattta ttattatcaa aagaaaacat taaaaattta atgaaacacc tactcataag
     4681 attttgacac tgattatcat tgatccgaga ctttcgttgt tcatgacgaa aatgtctcgg
     4741 atttttcttt aatattgtga cgatcaacat tttgttgctg aacagtcccg tcatataatc
     4801 tctacgtttc ataccccgta taggtatatg ttatgctaaa gttatattga attatagcgt
     4861 gataaacaga ggaggcgtta tctttgaaaa ataatcaaga gcaccatcat caccaacatg
     4921 tgcatgaaag tcaccaccct catagtcatc atatgcatca cgatgaccat gcacatcacc
     4981 atcacgagaa ttttaaaatg aagttttttg tgtcattgat ttttgcgata ccgattatca
     5041 ttttttctcc aatgatgggc gtacaattgc catttcaatt cacatttcca ggttctgact
     5101 ggatggtgtt aatccttgcg accattttat ttatttacgg cgggcaaccg tttttggttg
     5161 gcgcgaaagg tgaaatcact tcgaaaaaac cgggcatgat gacgctcgtt actttaggta
     5221 tttcagttgc ttacatttac agtctgtatg ctttttattt gaatcatttc agtgatgcaa
     5281 caggtcatac gatggatttt ttctgggaac tcgcgacatt aattttaatt atgttgttgg
     5341 gtcattgggt tgaaatgaac gcggttggaa gtgctggcga tgcattgaag aaaatggcag
     5401 cactgttacc ggataaggtg attaaagtta cgaataatca acgtgaggaa gttaaaatat
     5461 cggatattgc gttaaatgat atcgttgaag tgaaagcggg agaaagtatt ccgacagatg
     5521 gtatgattgt tcgaggtgag actgcgatag acgaatcgtt agtgaccggg gagtctaaaa
     5581 aagttcagaa aaagccaaat gatcaagtca tcggtggttc tatcaatggg tctggcacga
     5641 tacaagtgaa ggtgactgct gtaggagaag caagttacct ttcgcaagtg atggatatta
     5701 taaaacaagc tcaaaatgac aagtctcgag cagagttatt atctgataaa gtggcgggtt
     5761 atctgttcta ttttgccata agtgtcggca tgattgcatt tattatatgg atgttgatag
     5821 acaatcatat tgatttcgca ttagaacgac tcgttacggt gctagtcatt gcttgtccac
     5881 atgcgctagg gttggccata cctttagtca ctgcgcgttc gacatcaata ggagcgcatc
     5941 atggtttgat gattaaaaat agatcagcaa tagaaacggc acaacatatt gattatgtca
     6001 tgatggataa gacaggtaca ctcactgaag gtcacttctc agtcaatcac tatgagagct
     6061 tcaaagcggg tatgagtgat gaggcagtat taagtttgtt tgcttcatta gaaagtcaat
     6121 cgaatcatcc attagcaacg agtattgtgg ggtttgctaa aagtaaaaac attgcatatg
     6181 cgcaaccgca agatgttcaa aatatttcag gtattggatt ggaagggaaa gttggcgatc
     6241 aatcttataa aatcaccaat gttacctacc ttgaacaaaa tgggtttgat tatgatcaag
     6301 cgttgttcac gaaattagca cagcaaggca attccattag ctatttaatc gatgaacaac
     6361 aagtcatagg tattatcgcg caaggtgatc aaattaaaga cagttcgcaa caaatggtgg
     6421 cagatttgct cgcgaaaggt atcacacctg tcatgctcac gggtgataat caagaagtgg
     6481 cggaaacggt agcgaaagcg ttaggtatta atgatgtcca tgcacaactc atgccagaag
     6541 ataaggaaag cattatcaaa gcgtatcaaa gtaaaggtaa gaaagtgatg atggtgggtg
     6601 acggtattaa tgatgcgccg agtttgatca gatcagacat cggtatcgcc attggagcag
     6661 gtacagatgt tgcagtagac tctggtgatg ttatccttgt taagagtgat ccgagtgaca
     6721 tcattcattt cttcacactt tcaaaacgga caatgagaaa aatggttcaa aacttatggt
     6781 ggggtgcagg gtataatatc gttgcagtgc cattagcagc tggaatttta gcatctattg
     6841 gcttgatatt atcgccagct gtcggtgcga ttttaatgtc gctcagtact gttatcgttg
     6901 ctattaatgc ttttacattg aagttggaat agggtgaaca tgtatgccat ctactttggg
     6961 ttgagtaggt ggcatttttt aggaaaagtc acaaaactta agagtataac ccgggaaata
     7021 taacgataaa aaagtttata gttacattat aaaaagattt gatagaatag catttaatta
     7081 caggttatcg tcagtgatga aggagctgtt ggatatggat gtcggcaatc aaattaggat
     7141 ttatagaaaa gaaaggcaat tatctcagat ggcgttagca gagaaaattg atgtatcgac
     7201 ccaaacgatt tctaactggg agaatgagag aacctatcct gacttgtatc atttgattgt
     7261 tctcagttct ttattcaacg tttctctaga ccaacttgta aaaggagatg tagtagaaat
     7321 gaagaacatc atcgatcact ataatatgga cagatatggt aaattgatgc ttgtttttat
     7381 gcttattgcg gtgatttcag tcggaccagt tttgaaattc agcgacggat ggtacggttt
     7441 attcattcca tttatatttt gggcgttttc aatgtattat gccattaaga ttgaacgttt
     7501 gaagaaaaag tatgatgtca aaacgtataa agagatagtg gattacatgg agtatggcgc
     7561 aaagacttat aacgatacaa gagaaaaaaa gaaattgttg atagaggaaa cattaattgt
     7621 tgtagtattc gtcgcagtgt cggttgtttt gatgttaggc agtctgtttt tgtttaattt
     7681 gttttaatag aaggtgtgaa tgatatggaa gagattttat cgtaagatgc tataatttat
     7741 tgatattcga taaattaaat ggtgtatttt tatcgaatat caataagggg tggatagaga
     7801 tgaatgtcaa aatgatgttg cgattcacat aatttatgtt aagtttcttg ttgtta
//
LOCUS       DANHPA010000106         7433 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.106, whole genome shotgun sequence.
ACCESSION   DANHPA010000106 DANHPA010000000
VERSION     DANHPA010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 7433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7433
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.106"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            313..861
                     /locus_tag="PTC28_002044"
     CDS             313..861
                     /locus_tag="PTC28_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HDK5717290.1"
                     /translation="MVKTIYFVRHATREHTVKSDTAPLSEKGRREAENLVKWFEGKHV
                     DAIYASPYARTLETVIPLARVNNINIQVEDGLRERVIGEWVDDFDTYAAEQWMNFDYR
                     LLGGESLKQVQKRIVSSFQDILSQEKGETIVISVHGTSLAVLFHTLTDGTFAYEQFKQ
                     MTMPDVYTYDVDTKVLKRTYLN"
     gene            1003..2073
                     /gene="ulaG"
                     /locus_tag="PTC28_002045"
     CDS             1003..2073
                     /gene="ulaG"
                     /locus_tag="PTC28_002045"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ascorbate 6-phosphate lactonase"
                     /protein_id="HDK5717291.1"
                     /translation="MTLNHINEVTKEKWILNTFPEWGTWLNEEIENEVVEENTFVMWW
                     LGCTGIWLKSHENTNILCDMWCGTGKRTQKVGKMKKGHQMQRMSGCQNLQPNLRAQPF
                     VIDPFEIKGVDALVVTHIHSDHLDINTAAAVMQNTNEDVPFIGPQEVVNTWKKWGVPE
                     ERCIVVKPGDSVQVKSIEIQVLEAFDRTALVTADPSVTLKGKLPVDMDEIAVNYLFKT
                     SGGSLYHAGDSHYSNTFAKHGNEHDINVVIGAFGENPRGITDKVTSVDMLRMAESLKA
                     DVVIPVHHDIWTNFQADPKELLLLWEFKRKVLKYQFKPYIWQVGGKFVFPKDKDDLEY
                     HYPRGFDDVFSTDTDLPFPSFL"
     gene            2101..3528
                     /locus_tag="PTC28_002046"
     CDS             2101..3528
                     /locus_tag="PTC28_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
                     /protein_id="HDK5717292.1"
                     /translation="MQIFMNGFTWFSNNILSKPEFFIGIIVFIGYALLKKKLYECFAG
                     FIKATVGYMILTVGAGGLVATFRPILAGLGERFGLKAAVIDPYFGLNAVDGALKSIGL
                     TTSYTMLALLVGFLLNIVVVLLRKFTKIRTLFITGHVMVQQASTVTWIIFLAFPEYRN
                     FVGAILVGIIVGLYWAVGSNLTVGPTQRLTNHSGFAIGHQQMFAIWIVDKIAPKIGNK
                     EKNLDNIKLPKWLSIFHDNIVATGTLMLLFFGTILVILGEDFLRHLDPKKFPETLSFM
                     TYVVSSSLSFAVYLAILMMGVRMFVAELTQSFQGISNKILPGSLPAVDCAASYNFTPQ
                     NAILFGFIFGSIGQFLTILGLLVFHSPVLIITGFVPVFFDNATIAVFANKVGGTRAAM
                     TCSFVSGICQVAIGAIAVVIFQLYKFGGWHGNIDFELIWPGFGALMQHFGLIGYVAIV
                     VILLIIPQLQYRRAKDKAAYDTGFE"
     gene            3552..3830
                     /locus_tag="PTC28_002047"
     CDS             3552..3830
                     /locus_tag="PTC28_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HDK5717293.1"
                     /translation="MLKILAACGNGMGSSMVIKMKIEKCLRELNVSDFVVDYCSVGEA
                     KSQASSYDVVFASKHLIHELEGRTSSKLLGLENLMDDQEIKENLKTVI"
     gene            3843..4310
                     /locus_tag="PTC28_002048"
     CDS             3843..4310
                     /locus_tag="PTC28_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDK5717294.1"
                     /translation="MLSFKESLITEKSVLLNQHADSWEEAVRIAARPLVESEAVKPEY
                     VDAIIKSTHHYGPYYLLMEGMAMPHARPEDGVNRNAFSLVTFDTPVPFSDGKPAQVFV
                     VLAATSAEIHTSIAIPQIVAVFEIENIIEKLSSATSVEEVFAIIDQADMSQYI"
     gene            4327..4965
                     /locus_tag="PTC28_002049"
     CDS             4327..4965
                     /locus_tag="PTC28_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000056760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-L-gulonate-6-phosphate decarboxylase
                     UlaD"
                     /protein_id="HDK5717295.1"
                     /translation="MGLPLLQIALDNQNIPDAITTIQQLGDVVDVVEVGTILCLQEGK
                     AAIEVMRALYPDKCILADTKCADAGKTVAQNCKDAGANWMTVICSATLPTMVAARKVM
                     DDLQVELYGDWTFEQAQQWMDNGIQQVVYHQSRDALLAGETWSNADLDKIRRLIEMGF
                     KVSVTGGLELDTIEKFKGLDVYAFIAGRSLREAESPHQAALNFKAEIQRVFG"
     gene            4965..5828
                     /locus_tag="PTC28_002050"
     CDS             4965..5828
                     /locus_tag="PTC28_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 3-epimerase"
                     /protein_id="HDK5717296.1"
                     /translation="MVYLGIYEKALPNQIDIEEQLKMAADLGFQFLELSIDETDHRLA
                     RLDWGEDKINSIVKAQLDTGVAIQSMCLSGHRRFPFGSADASKRETAMIIMKKAVQLA
                     HQLGIRVIQLAGYDVYYEKKTATSRRLFIEGVREALKIAAEKQIILAIEIMDDPFMSS
                     LTKYMAIKDEIQHPLLKVYPDIGNLSAWPENDVRKELALAAHEIVAVHLKDTRAVTAT
                     YEGQFKNVPFGEGCVDFVNAFRELEAIDYHGPFLIEMWSENAADPRAEIQKAKTFIME
                     QLKESGAYQHE"
     gene            5821..6516
                     /gene="araD"
                     /locus_tag="PTC28_002051"
     CDS             5821..6516
                     /gene="araD"
                     /locus_tag="PTC28_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase AraD"
                     /protein_id="HDK5717297.1"
                     /translation="MNDAIIKQHVYEANMQLPKNNLVKLTWGNVSVIDRDKGIICIKP
                     SGVPYSKMRPEDMVITDLDGKPFDNQLKPSSDLATHVYLYQHMDNVQSIVHTHSLHAV
                     AYAQAGRDIPAYGTTHADTFYGPVPCTRSLTEAEVATDYELNTGKVIVETFEQRQINP
                     AAIPAVIVNQHGPFIFGKSLKKAVEHTIILEEVAEMAMKSELLKQDMNEIDRFLLDKH
                     YFRKHGATAYYGQ"
     gene            6580..>7433
                     /locus_tag="PTC28_002052"
     CDS             6580..>7433
                     /locus_tag="PTC28_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional antiterminator"
                     /protein_id="HDK5717298.1"
                     /translation="MVDFDKKLLCFLDYFKKRQKFKSVSQTAKAIGVSRRMIYYYINK
                     LNDILKLSDMSPISKDDEGYFYIEPLQSTVIETYFHHKASTTNYIFKRDERIILIASA
                     ILLSQKVLRVKTFEDYFDVSKNTVISDLNEVKKWLARYQIPLLNDKKQGYYVDTAVNF
                     ERNVIYEMIKMIEIEDYHALFENMLTFNQEACLIHQYQSFEYEFYRAFDQYEHMLHKK
                     ISLSNKRILCRCLFVTLIFHSERPIALEIHQRQMIEKRLEYYISQQLVEKLKTHMPSI
                     VTEVHFIA"
BASE COUNT         2329 a         1141 c         1664 g         2299 t
ORIGIN      
        1 atggcaaaag aagatggata gagtagttga aaagacgaat gtaaacgaag taatattaaa
       61 ataagttcgg gttttattta gcgtggatta aaatttgtat tattaactat ttattaactt
      121 tgaatttttt cgtattaaac agtcaagttt ttgatatgtt aattcttgtg ttgataattt
      181 tgtgtttttt attagcgaat agtattttaa ataaccattc attcataaaa cgccggatat
      241 tatgatgcag tcaaatgtgc catgaaaaaa attaatgttg ttagtgataa ggttttctaa
      301 agggaggtca aaatggtaaa aacgatttat tttgtaagac atgcgacgag ggagcatacg
      361 gtgaagtctg atacggcgcc attatcagaa aaagggcgac gagaggcaga aaaccttgtg
      421 aagtggtttg aggggaaaca tgtcgatgcc atttatgcga gtccatatgc gcgtacgctt
      481 gaaactgtaa taccacttgc acgtgtgaac aatataaata ttcaagtaga ggatggttta
      541 agagaacgcg tcatcggtga atgggtggat gattttgata catacgctgc tgaacaatgg
      601 atgaattttg attatcgctt acttggaggg gagtcgttga aacaagtgca gaaacgtatc
      661 gtatcgagtt ttcaggacat tttgtcacaa gagaaaggtg agaccattgt gatcagtgtt
      721 catggtacgt cactcgctgt gctctttcat acgttgacag atggtacatt tgcttatgaa
      781 cagttcaaac agatgacgat gcctgatgtt tatacttacg acgttgatac aaaagtttta
      841 aaacgcacat atttgaactg atgaatgctt gaaaatgaat attttgatgc gctaacagtc
      901 cagtgatgta catgtttttt gtacatatat tggacttttt cttttataac aataggcata
      961 aactgaggat aagtaagcgt ttacatactt tgaaaggagt gcatgacttt gaatcatatt
     1021 aatgaagtaa caaaggaaaa gtggattttg aatacttttc cggaatgggg cacttggctc
     1081 aacgaagaaa tagaaaatga ggttgtggaa gaaaatactt ttgtcatgtg gtggttaggt
     1141 tgtacaggta tttggttgaa atctcatgag aacacgaata ttttgtgcga tatgtggtgc
     1201 ggtacgggta agcgtacgca aaaagttggg aaaatgaaaa aagggcatca gatgcaacga
     1261 atgagtggct gtcaaaattt acaaccgaat ttacgagcgc agccttttgt cattgacccg
     1321 tttgagatta aaggtgtgga tgctttagtg gtgacgcata ttcactcaga tcatttggac
     1381 atcaatacag cggctgcagt gatgcaaaat acgaatgaag atgtcccgtt tattggtcct
     1441 caagaagtgg tcaacacatg gaaaaaatgg ggtgtgcctg aagaacgctg tatcgtcgtt
     1501 aagccgggtg attccgttca agtgaaaagt attgaaattc aagtgttgga agcgttcgac
     1561 cgtaccgcac tcgtaacagc agatccttct gtaacattga aaggtaagtt acctgtggat
     1621 atggacgaaa tcgcggtgaa ctacttattc aaaacgtctg gcggttcact gtatcatgcg
     1681 ggtgattcac attattcgaa tacatttgcg aaacacggca atgaacacga tattaatgta
     1741 gtcatcggtg catttggtga aaatccaaga ggaattacgg ataaagtgac atcggtggat
     1801 atgcttagaa tggcggaaag tttaaaagca gatgttgtca ttccagtgca tcatgacatt
     1861 tggacgaatt tccaagcaga tcctaaagaa ttgttattac tatgggagtt taaacgtaaa
     1921 gtattaaagt atcaatttaa gccttacatt tggcaagttg gtggtaaatt tgtattcccg
     1981 aaagataaag atgatttaga gtatcattac ccacgtggtt ttgatgatgt attctctaca
     2041 gatactgatt tacctttccc atcattttta taagccatat gcatgatagg agggaatcac
     2101 atgcaaatat ttatgaatgg gtttacgtgg tttagtaaca atattttatc taaaccagag
     2161 tttttcatag gcattattgt atttattggt tacgcattat tgaaaaagaa actttatgaa
     2221 tgttttgcgg gctttattaa ggcaacagtg ggttacatga ttttaacggt aggtgcaggg
     2281 ggcttagttg cgactttccg accaattctt gcagggttag gggaacgttt tgggttgaaa
     2341 gcggccgtta ttgatcctta ctttggctta aatgcagttg atggcgcgtt gaagtcaatc
     2401 ggtttaacga cgtcatacac gatgctagcg ctattggtgg gctttttact caatatcgtt
     2461 gttgtgttgt tacggaaatt cactaaaatt agaacattat ttattacagg acacgtcatg
     2521 gtgcaacagg cgtcgacggt gacttggatt attttcttag catttccaga gtatcgtaac
     2581 tttgtcggtg ccattttagt cggtattatc gtagggctat attgggctgt aggttcaaat
     2641 ttaacggttg gtccaacaca acgtttaacg aatcattcag gatttgcgat tggtcaccaa
     2701 caaatgtttg cgatttggat cgttgataaa attgcaccta aaatcggcaa taaagagaag
     2761 aacttggaca atattaaact gccgaaatgg ttgtctattt tccatgataa tatcgttgct
     2821 acagggacat tgatgttact tttctttggt acgattttag ttattttagg tgaagacttc
     2881 ttgcgtcatt tagatcctaa aaagttccct gagacattat cttttatgac atatgtcgtt
     2941 tcaagttcgc tatcgtttgc agtatatctt gcaattttaa tgatgggtgt gagaatgttc
     3001 gttgccgagt taacgcagtc tttccaaggt atttcaaaca aaattttacc tggctcactg
     3061 cctgctgttg actgcgccgc atcttataac tttacacctc aaaatgcgat tttatttggt
     3121 tttattttcg gctctatcgg acaattttta acgattctcg gtttgcttgt gtttcattca
     3181 ccagtattaa ttattaccgg attcgttcct gtgttctttg acaatgccac aattgcagtg
     3241 tttgcgaata aagtcggtgg tacacgtgct gctatgactt gttcgtttgt ttcaggtatt
     3301 tgtcaagttg cgataggtgc cattgcagtg gtcattttcc aactgtacaa atttggagga
     3361 tggcatggca atatcgactt tgaattaatt tggccaggtt tcggtgcgtt gatgcaacat
     3421 tttggtttga ttggttacgt ggcgattgtc gttattttat taatcattcc acagttgcaa
     3481 tatcgtcgcg ctaaagataa agcagcatat gatacaggat tcgaataaga tgaagaaatg
     3541 agggaaatat catgttaaaa attttagcag cttgcggtaa tggtatggga agttcgatgg
     3601 tcattaagat gaaaattgaa aaatgtttac gcgaattaaa cgtgagtgat tttgttgtag
     3661 attattgcag tgtcggtgaa gcgaaatctc aagcaagtag ttatgatgtc gtttttgcga
     3721 gtaaacattt gattcacgag ctagaagggc gtacttctag caaattgctc ggtttagaaa
     3781 atttaatgga tgatcaagaa attaaagaga acttaaaaac tgtcatttaa aggtgatgca
     3841 tgatgttatc gtttaaagaa agcttaatta cagaaaaatc agttttgtta aatcaacatg
     3901 cagactcatg ggaagaagct gtccgtattg cggcgcgtcc attagttgaa agtgaagcgg
     3961 taaaaccaga atatgttgat gccattatta aaagtacgca ccattatggg ccatattact
     4021 tgttaatgga agggatggca atgccgcatg cgcgtcctga agatggtgtg aacagaaatg
     4081 ccttttcatt agtcacattt gatacgccgg ttccattttc ggatggcaag cctgcgcaag
     4141 tgtttgtcgt actagcggca acctctgcag aaattcatac aagtattgcg ataccacaaa
     4201 tcgttgcggt ttttgaaatc gagaacatta ttgaaaaatt aagttcggcg acttcagttg
     4261 aggaggtatt cgccattatt gatcaagctg atatgagtca atatatataa cattggaggt
     4321 ttagcaatgg gattaccatt attacaaatt gctttagata atcaaaatat tccagatgca
     4381 attactacga ttcaacaact cggtgatgtc gttgatgttg tagaagtggg aacaatttta
     4441 tgtttacaag aaggaaaggc tgccattgaa gtaatgcgtg cgctatatcc tgataagtgt
     4501 atacttgcgg atacgaaatg tgcagatgca ggtaaaacgg tcgcacaaaa ctgtaaagat
     4561 gctggtgcaa actggatgac ggtcatttgt tctgcaacac taccaactat ggtggctgca
     4621 cgcaaagtga tggatgactt acaagttgaa ctttatggcg actggacatt tgaacaagca
     4681 caacaatgga tggacaatgg tattcaacaa gtcgtctatc atcaaagtcg ggatgcattg
     4741 ttagcaggtg aaacatggtc aaatgcagac ttggataaaa ttcgtcgact gattgagatg
     4801 ggctttaaag tttcagtaac gggtggatta gaactcgaca cgattgaaaa atttaaaggc
     4861 ttagacgtgt atgcctttat agcggggcgt agtttaagag aagcagaatc accacaccaa
     4921 gcggctttaa attttaaagc tgaaattcaa agggtgtttg gataatggtg tatttaggca
     4981 tttatgaaaa agcattgccc aatcaaatcg acattgaaga gcaattaaaa atggctgcgg
     5041 atttgggatt tcaatttttg gagttatcca ttgatgagac ggatcaccgg ttggcacgtt
     5101 tagactgggg agaagataaa attaacagta ttgtgaaggc gcaactcgac acaggtgttg
     5161 cgattcaaag tatgtgttta agtggccacc gccgttttcc atttggttca gctgatgcat
     5221 ctaagcgtga aacagcaatg attatcatga aaaaagccgt tcaactcgca catcaactcg
     5281 gcattcgtgt gattcagtta gcgggctatg atgtgtatta tgagaagaaa acagcaactt
     5341 caagacgttt gtttatcgag ggtgtacgtg aagcattaaa aatagctgcg gaaaaacaaa
     5401 tcatactcgc aatcgaaatt atggacgacc catttatgtc gagtctaacg aaatacatgg
     5461 cgattaaaga cgaaattcaa cacccgttat tgaaagtgta tccagacatc ggtaatttgt
     5521 cagcttggcc tgaaaacgat gtaagaaaag aattagcatt agcggcgcat gaaattgtcg
     5581 cggtacattt gaaagataca cgagcagtga cggcaactta cgaaggtcag tttaaaaatg
     5641 tcccttttgg agaaggatgt gttgattttg tgaatgcatt tcgtgagtta gaggctatcg
     5701 attatcacgg accattttta attgaaatgt ggtcagaaaa tgctgccgat ccacgagcag
     5761 aaattcaaaa agctaaaacc tttattatgg aacaattaaa agagagtggt gcatatcaac
     5821 atgaatgatg caattatcaa acaacatgtt tatgaagcga atatgcaatt acctaaaaat
     5881 aatttggtaa aattgacatg gggaaatgtg agtgtgattg accgtgacaa aggcatcatc
     5941 tgtattaaac cgagtggtgt gccgtattct aaaatgagac ctgaagatat ggtgataaca
     6001 gatttagacg ggaaaccttt tgataatcaa ttaaagccgt cgtcagattt ggcaacacat
     6061 gtctacttat atcaacatat ggataatgtt caaagtatcg tccacaccca ttcgttacat
     6121 gccgtagctt atgcccaagc aggtcgtgat attcctgcat atggcacgac acacgcagat
     6181 acgttttatg ggccggtacc gtgtacgaga agtttgactg aagcagaagt agcgacggat
     6241 tatgagttga atacaggcaa agtcatcgta gaaacatttg aacaaagaca aattaatcca
     6301 gctgcgattc cagcagtgat tgtgaatcaa catggtccat ttatctttgg taaatcttta
     6361 aagaaagcag tagaacatac gattatttta gaagaagttg ctgaaatggc aatgaagtct
     6421 gaattgttga agcaagatat gaatgaaata gatagatttc tattagacaa acattatttt
     6481 agaaagcatg gtgctactgc ttattacggt caataaaaca cgtaagtcat tccttttctc
     6541 atataaagtc tgatgatatt gaaggaagtg tgatttctga tggttgattt cgataaaaaa
     6601 ttgttgtgct ttttagatta ctttaaaaag cgacaaaagt ttaaaagtgt gagtcaaact
     6661 gcgaaggcca ttggtgtatc gcgacgtatg atttattact atattaacaa attgaacgac
     6721 attttaaagc tgtcagacat gtctccgata tcaaaagatg acgaaggtta cttttatatt
     6781 gaaccgttgc agtctacggt gattgaaaca tattttcatc ataaagcatc cacgacgaat
     6841 tacattttta agagggatga acgtattatt ttgatagcat ccgccatttt gttaagtcaa
     6901 aaagtgctca gagtgaaaac ctttgaagac tattttgatg tgagtaaaaa taccgtcatt
     6961 agcgatttga atgaagtgaa aaagtggttg gctcgctatc aaatccctct tttaaatgat
     7021 aaaaaacaag gctattacgt tgatacagct gtgaattttg aacgcaatgt catttatgaa
     7081 atgattaaaa tgatcgaaat tgaagattat catgcattat ttgaaaatat gctgaccttt
     7141 aatcaagaag cgtgtctcat tcatcaatat cagtcatttg aatatgagtt ttatcgtgct
     7201 tttgatcagt atgaacatat gttacataaa aagatatcgc tatcgaataa acgaatttta
     7261 tgtcgatgtt tgtttgtaac cctcattttt cactcagagc gaccgattgc attggaaatt
     7321 catcaacgtc aaatgattga gaaacgttta gaatattata ttagccaaca gttagtcgaa
     7381 aaattaaaga ctcatatgcc gtcgatagtg actgaggttc attttatagc gat
//
LOCUS       DANHPA010000107         6947 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.107, whole genome shotgun sequence.
ACCESSION   DANHPA010000107 DANHPA010000000
VERSION     DANHPA010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 6947)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6947)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6947
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.107"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            34..279
                     /locus_tag="PTC28_002053"
     CDS             34..279
                     /locus_tag="PTC28_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000567888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDK5717299.1"
                     /translation="MIDVNELLEEAIRETENLNDGEVFLVKDLFKGYVGNRIPRKDRL
                     LLGTLFLNHVSKMNGNLKAIEKTSSNQQRYKKTIDKF"
     gene            382..1251
                     /locus_tag="PTC28_002054"
     CDS             382..1251
                     /locus_tag="PTC28_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002328890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HDK5717300.1"
                     /translation="MVDNIIKSVAEKLSSLSYIEGIVLGGSRARGTHTEDSDIDIGIY
                     YNSESFDINTINQFATKLDDEHRNNLVVPPGAWGDWINGGGWLVINGYHVDLILRDIK
                     RVEQIMKDTEHGIVTANYQTGHPHGYISAMYRGELAISKILYAKNESLCELKKQAETY
                     PNALQKSLVNFFMFEAGFSLMFVKANSGTDDKYYIAGHVFRIVSCLNQVLFACNNAYC
                     INEKKAIKLLETFEHKPEKYTEKVNHIFEVLGISLFECYDMTEKLYNEVNEIVSEINN
                     FLNEESSDERKQI"
     gene            1232..1966
                     /locus_tag="PTC28_002055"
     CDS             1232..1966
                     /locus_tag="PTC28_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016250180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDK5717301.1"
                     /translation="MKENKYDDNIFFQKYSQMSRSQKGLAGAGEWETLKKMLPDFKGK
                     RVLDLGCGYGWHCIYAMENGASSVVGVDISHKMLEVAKGKTHFPQIEYECCAIEDVDF
                     PEESFDVILSSLAFHYVADYENLIKKIYRMLKAGGNLVFTVEHPVFTAHGTQDWYYNE
                     KGEILHFPVDNYYYEGKRTAMFLEEKVTKYHRTLTTYLNTLLSNSFIINQIVEPQPPE
                     NMMDIPGMADEMRRPMMLIVSAKKKM"
     gene            1999..2907
                     /locus_tag="PTC28_002056"
     CDS             1999..2907
                     /locus_tag="PTC28_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032491779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside nucleotidyltransferase ANT(6)-Ia"
                     /protein_id="HDK5717302.1"
                     /translation="MRSEKEMMDLVLSLAEQDERIRIVTLEGSRANINIPKDEFQDYD
                     ITYFVSDIEPFISNDDWLNQFGNIIMMQKPEDMELFPPEEKGFSYLMLFDDYNKIDLT
                     LLPLEELDNYLKGDKLIKVLIDKDCRIKRDIVPTDIDYHVRKPSAREYDDCCNEFWNV
                     TPYVIKGLCRKEILFAIDHFNQIVRHELLRMISWKVGIETGFKLSVGKNYKFIERYIS
                     EDLWEKLLSTYRMDSYENIWEALFLCHQLFRAVSGEVAERLHYAYPEYDRNITKYTRD
                     MYKKYTGKTGCLDSTYAADIEERREQ"
     gene            2904..3446
                     /gene="sat4"
                     /locus_tag="PTC28_002057"
     CDS             2904..3446
                     /gene="sat4"
                     /locus_tag="PTC28_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="streptothricin N-acetyltransferase Sat4"
                     /protein_id="HDK5717303.1"
                     /translation="MITEMKAGHLKDIDKPSEPFEVIGKIIPRYENENWTFTELLYEA
                     PYLKSYQDEEDEEDEEADCLEYIDNTDKIIYLYYQDDKCVGKVKLRKNWNRYAYIEDI
                     AVCKDFRGQGIGSALINISIEWAKHKNLHGLMLETQDNNLIACKFYHNCGFKIGSVDT
                     MLYANFENNFEKAVFWYLRF"
     gene            3539..4333
                     /locus_tag="PTC28_002058"
                     /note="aph(3')-IIIa"
     CDS             3539..4333
                     /locus_tag="PTC28_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032491780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase
                     APH(3')-IIIa"
                     /protein_id="HDK5717304.1"
                     /translation="MAKMRISPELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLK
                     MTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEY
                     EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE
                     EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKISGFIDLGRSGRADKW
                     YDIAFCVRSIREDIGEEQYVELFFDLLGIKPDWEKIKYYILLDELF"
     gene            4609..5181
                     /locus_tag="PTC28_002059"
     CDS             4609..5181
                     /locus_tag="PTC28_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001079940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HDK5717305.1"
                     /translation="MNRINRVTSILIQLQSKKIIPAKEIAQRFNISLRTVYRDIRTLE
                     EAGIPIGSEAGKGYFLVEGFLLPPVMFTAAEVGALITAGKFLNCHGDESFIKDFDSAM
                     YKIKSILKHGEKNYAQELENSINVYSTSGQKNTLADNVIAAIQTAICNKRVISIQYPA
                     SGGQEPESRMIEPISLGFYEQNWYLIGFAG"
     gene            5154..5561
                     /locus_tag="PTC28_002060"
     CDS             5154..5561
                     /locus_tag="PTC28_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HDK5717306.1"
                     /translation="MVLNRFCRLRNEYRNFRVDRIKSICIEEELCQSHDGSLEQILKQ
                     MLSYKKLYNVILRAEKGETYNSIKNRYSLGFLEETDLGSKMEIEFQTDSFEILSKQLI
                     EYGSGIEIVQPDELKCITRKHLAQITNHCLNLI"
     gene            5672..6331
                     /locus_tag="PTC28_002061"
     CDS             5672..6331
                     /locus_tag="PTC28_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RibD family protein"
                     /protein_id="HDK5717307.1"
                     /translation="MKPKIIMHTQISLDGRIKGFDNPEVYYQVAGGIHSDAVLFGSNT
                     VFTAFEKYPAETEADFEKIITSPEDPRPIGVIPDSRGILRSLHCLRNLGYLKEIVILV
                     STATPKEYLNYLEERHYPYIVSGNDHVDYEKAFQILHEQYGCKYMRTDSGGGLTNKLL
                     ENGLIDEISLVISPCFVGNKEKQLFDNLLLSEKVNLELQGTENAEHGCLSLRYAVKNK
                     D"
BASE COUNT         2340 a         1071 c         1578 g         1958 t
ORIGIN      
        1 gggctgaccc attattaata aggagtggac aacatgattg atgtaaatga gctattggaa
       61 gaagctatta gagaaactga aaatctaaat gatggcgaag tttttcttgt taaagattta
      121 ttcaagggat atgtggggaa taggataccc agaaaggatc gacttctgct tggaacgtta
      181 tttttaaacc atgttagcaa aatgaatggt aatttaaagg ctattgaaaa gacttcatct
      241 aatcagcaga ggtataaaaa gacaattgat aagttttaac tatcttttgt gaaattaaaa
      301 aaattataaa tatgttgagt agaagcaaaa gatttggctt ggaattttta cagcagtgaa
      361 tcgataaaag gagcatgctt gatggtagat aatattatta aatcagtagc agagaaatta
      421 tcctctctgt cttatataga aggtattgtt ttaggtggtt cacgtgcaag gggcacccat
      481 acagaggatt cggatataga tatcggcatc tattacaatt cagaatcatt tgacataaat
      541 actattaatc aattcgctac aaagctggat gatgagcata gaaataacct tgttgtacct
      601 cccggagcat ggggtgattg gattaatggc ggcggatggt tagtcataaa cgggtatcat
      661 gtggatttaa ttttacgtga tattaaacgt gtggaacaaa taatgaaaga tacagagcac
      721 ggaattgtta ctgccaatta tcagactggg catccccatg gttatattag tgcaatgtat
      781 cgaggagaat tagcgattag caaaatacta tatgctaaga atgaaagctt atgcgaatta
      841 aaaaaacagg cagaaactta tcccaatgct ttgcagaaaa gtttagttaa cttttttatg
      901 tttgaagcag ggttctcttt aatgtttgta aaagcaaatt cgggaacaga cgataaatat
      961 tatattgcgg gtcatgtttt tcgtatagtt tcatgtttaa atcaagtgtt atttgcatgt
     1021 aataatgctt attgtatcaa cgaaaagaaa gctataaaac tgcttgaaac ttttgaacat
     1081 aaacctgaaa aatataccga gaaggtaaat catatttttg aagtactcgg tatctcactt
     1141 tttgaatgct acgacatgac cgagaagctt tataatgaag tgaatgaaat tgtatcggag
     1201 ataaataact ttttaaacga ggagagttca gatgaaagaa aacaaatatg atgataatat
     1261 attttttcaa aaatacagtc aaatgagtcg ctcgcagaaa ggactggctg gtgcgggaga
     1321 atgggagact ttgaaaaaga tgctacctga ttttaagggt aagcgtgtgc ttgatttagg
     1381 atgcggctat ggatggcact gtatatatgc gatggaaaac ggtgcttcct ctgtagtagg
     1441 tgttgatatt tctcataaaa tgctcgaagt agcaaaagga aaaacccatt ttccacagat
     1501 tgaatatgaa tgctgtgcca tagaagatgt ggatttccca gaggagagct ttgatgtaat
     1561 actaagttcg cttgcgtttc attatgtagc agactatgag aatttaataa aaaagatata
     1621 taggatgctg aaggctggtg gcaatttagt ttttacagtt gaacatcctg tttttactgc
     1681 tcatggaaca caagactggt attataacga aaaaggagaa atactgcatt tcccggtgga
     1741 caattattat tatgagggca aacggacagc tatgtttttg gaagaaaagg ttacaaaata
     1801 tcatagaaca ctgaccacat atctaaatac actgctttca aatagtttta taataaatca
     1861 gattgtggag ccacagccgc cagagaacat gatggatatt ccggggatgg cggatgaaat
     1921 gcgacgccca atgatgctga ttgtatcggc aaaaaagaag atgtaataat atagaaaaaa
     1981 taaacgagga gtatgtaaat gagatcagaa aaagaaatga tggatttagt actttcttta
     2041 gcagaacagg atgaacgtat tcgaattgtg acccttgagg ggtcacgcgc aaatattaat
     2101 atacctaaag atgaatttca ggattatgat attacatatt ttgtaagtga tatagaaccg
     2161 tttatatcta atgatgactg gcttaatcaa tttgggaata taataatgat gcaaaagccg
     2221 gaggatatgg aattattccc acctgaagaa aagggatttt cctatcttat gctatttgat
     2281 gattacaata aaattgatct taccttattg cccttggaag agttagataa ttacctaaag
     2341 ggcgataaat taataaaggt tctaattgat aaagattgta gaattaaaag ggacatagtt
     2401 ccgactgata tagattatca tgtaagaaag ccaagcgcaa gggagtatga tgattgctgc
     2461 aatgaatttt ggaatgtaac accttatgtt attaaaggat tgtgccgtaa ggaaatttta
     2521 tttgctattg atcattttaa tcagattgtt cgccatgagc tgctgagaat gatatcatgg
     2581 aaggtcggca tcgaaacagg ctttaaatta agtgtaggca agaactataa gtttattgaa
     2641 aggtatatat ccgaggattt gtgggagaaa cttttgtcca cctaccggat ggattcctat
     2701 gaaaacatat gggaagcatt atttctatgc catcaattgt tcagggcggt atccggtgag
     2761 gtggcggaaa ggcttcatta tgcctatccg gagtatgata ggaatataac aaaatatacc
     2821 agggacatgt ataaaaaata cactggtaaa accggctgcc tggatagcac atatgccgct
     2881 gatatagaag agaggcggga acagtgatta cagaaatgaa agcagggcac ctgaaagata
     2941 tcgataaacc cagcgaacca tttgaggtga taggtaagat tataccgagg tatgaaaacg
     3001 agaattggac ctttacagaa ttactctatg aagcgccata tttaaaaagc taccaagacg
     3061 aagaggatga agaggatgag gaggcagatt gccttgaata tattgacaat actgataaga
     3121 taatatatct ttactaccaa gacgataaat gcgtcggaaa agttaaactg cgaaaaaatt
     3181 ggaaccggta cgcttatata gaagatatcg ccgtatgtaa ggatttcagg gggcaaggca
     3241 taggcagcgc gcttatcaat atatctatag aatgggcaaa gcataaaaac ttgcatggac
     3301 taatgcttga aacccaggac aataacctta tagcttgtaa attctatcat aattgtggtt
     3361 tcaaaatcgg ctccgtcgat actatgttat acgccaactt tgaaaacaac tttgaaaaag
     3421 ctgttttctg gtatttaagg ttttagaatg caaggaacag tgaattggag ttcgtcttgt
     3481 tataattagc ttcttggggt atctttaaat actgtagaaa agaggaagga aataataaat
     3541 ggctaaaatg agaatatcac cggaattgaa aaaactgatc gaaaaatacc gctgcgtaaa
     3601 agatacggaa ggaatgtctc ctgctaaggt atataagctg gtgggagaaa atgaaaacct
     3661 atatttaaaa atgacggaca gccggtataa agggaccacc tatgatgtgg aacgggaaaa
     3721 ggacatgatg ctatggctgg aaggaaagct gcctgttcca aaggtcctgc actttgaacg
     3781 gcatgatggc tggagcaatc tgctcatgag tgaggccgat ggcgtccttt gctcggaaga
     3841 gtatgaagat gaacaaagcc ctgaaaagat tatcgagctg tatgcggagt gcatcaggct
     3901 ctttcactcc atcgacatat cggattgtcc ctatacgaat agcttagaca gccgcttagc
     3961 cgaattggat tacttactga ataacgatct ggccgatgtg gattgcgaaa actgggaaga
     4021 agacactcca tttaaagatc cgcgcgagct gtatgatttt ttaaagacgg aaaagcccga
     4081 agaggaactt gtcttttccc acggcgacct gggagacagc aacatctttg tgaaagatgg
     4141 caaaataagt ggctttattg atcttgggag aagcggcagg gcggacaagt ggtatgacat
     4201 tgccttctgc gtccggtcga tcagggagga tatcggggaa gaacagtatg tcgagctatt
     4261 ttttgactta ctggggatca agcctgattg ggagaaaata aaatattata ttttactgga
     4321 tgaattgttt tagtacctag atttagatgt ctaaaaagct ttaactacaa gctttttaga
     4381 catctaatct tttctgaagt acatccgcaa ctgtccatac tctgatgttt tatatctttt
     4441 ctaaaagttc gctagataga gttctatatt agagatgtaa agagttttgg tgaagaggtt
     4501 tgtgagtatg gcttttataa ccagggtgca atgagaagca ctaacagcag ctagcttaag
     4561 aacgcatagg atatactttt tatggaagtc acagaggagg aataaaattt gaacaggatt
     4621 aacagagtaa cctctattct tattcagctg caatcaaaaa aaataattcc tgccaaagaa
     4681 attgcacagc gatttaatat aagcttaagg acagtttaca gagatatccg gacacttgaa
     4741 gaagccggaa taccaattgg atctgaggcc ggaaaaggat attttcttgt agagggcttc
     4801 ctacttccgc cggtaatgtt tacagcggcg gaagtgggtg cattgattac agcagggaaa
     4861 tttttaaatt gccatggaga tgaatcattt ataaaggatt ttgattcagc tatgtataaa
     4921 atcaaatcta ttttgaagca tggtgaaaaa aactatgcac aggagttgga gaacagtatt
     4981 aacgtgtaca gcacatctgg acagaaaaat acattggcgg ataacgttat tgcagcaatt
     5041 cagactgcaa tctgcaataa aagggtaata tcaattcaat atcctgcatc aggagggcaa
     5101 gaaccggaaa gcagaatgat agagcctata tcactggggt tttatgaaca gaactggtac
     5161 ttaatcggtt ttgcaggcta agaaatgaat ataggaattt tcgtgtggat cggattaaaa
     5221 gcatttgcat agaagaagag ctctgtcaaa gccatgatgg ctctttggaa caaatattaa
     5281 aacaaatgct ttcatataaa aaactatata atgtaattct tagagctgaa aaaggggaga
     5341 catacaattc tatcaagaac aggtattctc tcggcttcct tgaagaaacc gatttgggaa
     5401 gtaaaatgga aatcgaattc cagacagatt cctttgagat attgagcaag cagctgattg
     5461 aatatggatc aggcattgaa atagtccaac ctgatgaatt aaaatgcata acccgtaaac
     5521 acctggcaca aattacgaat cactgcctaa acttgattta gagaaagcga ttggtctgtt
     5581 atgtattttt tgtaaggttt catatcccct gctgacatac agctgtcagt gtattatgat
     5641 attctactat caaaaaggag gattgaaaaa tatgaaacca aagataatta tgcacacaca
     5701 aattagcctt gatggccgca ttaaaggctt tgataatccg gaagtttact accaggttgc
     5761 cgggggaatt cattcggatg cggtgctgtt tgggtccaat actgttttta ctgcatttga
     5821 aaaatatcct gctgaaacag aggctgattt tgagaaaatc ataacaagcc cggaggaccc
     5881 cagaccaata ggagtcatac ctgacagcag aggtatcttg agaagtcttc attgcttaag
     5941 aaatcttgga tatctgaagg aaattgtcat tctggtatca actgccactc cgaaggaata
     6001 tttgaattat ttggaggaaa ggcattaccc atatattgtg tcaggaaatg atcatgtgga
     6061 ctatgaaaaa gcctttcaga tcctgcatga gcaatatggg tgtaaataca tgcggacaga
     6121 cagtggcggt ggattaacca acaaattatt agaaaacgga cttattgatg aaatcagtct
     6181 tgtgatatca ccatgttttg taggtaataa agaaaaacaa ctatttgata accttctgtt
     6241 atctgaaaaa gttaatttgg aattgcaggg aacagagaat gcagaacatg gctgtctgtc
     6301 attgcgctat gctgtgaaaa ataaggatta gtgcagcata ctttaaaaag tgtctgttgg
     6361 gacagtgtcc taaaggaagc ataagctcat ggctagcggc ggtgttaaag taacggcact
     6421 cggccccaat atatagttga tatgccccta agcctttgag ggcaaggcgg tcaaccgcgc
     6481 cttttccggt ccgcatacag tcgttcaatg agggtatcaa gctcggcaat gcggcggtgc
     6541 ttctcggtgg ttcgtttctt cgccgccgtt ttcggctaat tctaattgat ccgaactgta
     6601 aggataagca attatccggg gctagttaag tatcttagag aggaagataa agataagtaa
     6661 accaatttta aagttgtacc gaataaagcc ttcaagagga caacatgctt ttgaaggctt
     6721 tattgcttac aattacttgg attgtaacgc aaaagcaggc accaaatcaa tgaaaaatag
     6781 cctatccagg cgactgtttc agaaatatgg gcttccgcca aggggatacc agtggggtgc
     6841 gacatctttt ttgcccactc aaggcatgtg gagtgtgtgg cgttgttgcg tagaaagtaa
     6901 ggctggagtc cttatatctg gctgagctta atctctggta attttga
//
LOCUS       DANHPA010000108         6654 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.108, whole genome shotgun sequence.
ACCESSION   DANHPA010000108 DANHPA010000000
VERSION     DANHPA010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 6654)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6654)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6654
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.108"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..281)
                     /locus_tag="PTC28_002062"
     CDS             complement(<1..281)
                     /locus_tag="PTC28_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HDK5717308.1"
                     /translation="MVEKTLSELEKAMLKEEHIDVSTDLTLSIKLDILNEDYKIEPPQ
                     PFTTEQMINKLKENKLFFPESSSMKKCVDLLNTLGYYNLKYFIKNEFEK"
     gene            complement(472..714)
                     /gene="rpsR"
                     /locus_tag="PTC28_002063"
     CDS             complement(472..714)
                     /gene="rpsR"
                     /locus_tag="PTC28_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HDK5717309.1"
                     /translation="MAGGPRRGGRRRKKVCYFTANGITHIDYKDTELLKRFISERGKI
                     LPRRVTGTSAKYQRMLTTAIKRARHMALLPFVKDEA"
     gene            complement(768..1274)
                     /gene="ssb"
                     /locus_tag="PTC28_002064"
     CDS             complement(768..1274)
                     /gene="ssb"
                     /locus_tag="PTC28_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDK5717310.1"
                     /translation="MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGER
                     EADFINCVVFRKQAENVNNFLFKGSLAGVDGRLQSRSYENQEGRRVFVTEVVCDSVQF
                     LEPKSQNQRHANQNQGNQFDSYGQGFGGQQQGQNSSYQNNHQQPAHDNPFANANGPID
                     ISDDDLPF"
     gene            complement(1297..1593)
                     /locus_tag="PTC28_002065"
     CDS             complement(1297..1593)
                     /locus_tag="PTC28_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001831345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HDK5717311.1"
                     /translation="MRKYEVMYIVRPNIEEDARKAVVERFNGILASEGSEVLETKDWG
                     KRRLAYEIEDFKDGYYNIVRIQSENNKATDEFQRLAKINDDIIRYIVVREDENK"
     gene            1930..3417
                     /locus_tag="PTC28_002066"
     CDS             1930..3417
                     /locus_tag="PTC28_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="B domain-containing protein"
                     /protein_id="HDK5717312.1"
                     /translation="MKTKYTAKLLIGAATISLATFISQGNAHASEQTTGLAPAQPVNF
                     DSINVTPDQKTFYQVLHMEGISEDQREQYLKQLHEDPSSAQNVFSESIKDAIHPERRV
                     AQQNAFYSVLHNDDLSEEQRDAYIGRIKEDPDQSQEVFVESLNVAPKAESHEDRLIEL
                     QNKNLMEANEALKALQQEDSIQNKRAAQRAVNKLTPDSANAFQKELDQINAPRDAKIK
                     ADAEAKKQTPEVSAPQIEDAPTTEVAPSPKPNETQEEQKPNVSTPEKDTNKADAEKKP
                     EVDKSSKTEKNTQSEKAPKVESKEQAEKATENNKGADTKKEMQPAPSTESNINTNNNA
                     ATPSAPVLPETGKVTTSTLESYWNAFKDSVNKGYAYVKDSVTKGLDYLKEQYNYVSKK
                     YNDAKYYAELYKNHKSLIDTTVLGILNEKGTGAYISPIKIENSFNPFYKSYAQTRNFV
                     TEGINTGKVLYTLYQNPTVVKSALAAAQAIDTAKNAFNSIFSFFK"
     gene            complement(3471..4280)
                     /locus_tag="PTC28_002067"
     CDS             complement(3471..4280)
                     /locus_tag="PTC28_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDK5717313.1"
                     /translation="MINMKHVFTIVYKDALDIKSDRGVLVSVFIIPFIFSLVLPLALV
                     IGDIHFSVVDYIGGARMFIDQLPEQVIPKSIDPHHGMVYAILMYFFIPFFILIPVFVS
                     SMLATTSFTGEKEHKTIEGLLYTPITNKELMLGKILVSGIPSILLTWIAVFIYGIIAN
                     VYGVNVLGEMIFPNFSWIMVTFFIAPLITFLSISLVVAVSQRVNTSKSAQSVSMILVL
                     PIIGFIISQANGVFLFGPMISIILVVVLIVVDIIVYLAVSKRFDSDKLLTK"
     gene            complement(4273..5208)
                     /locus_tag="PTC28_002068"
     CDS             complement(4273..5208)
                     /locus_tag="PTC28_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5717314.1"
                     /translation="MLVRVNQLHKTLNGKDVINDISFTLKPGTINAILGPNGVGKTTT
                     VRLLTGLLQPTHGEIEVFGVKTTDPHFERVRQQMGVQNDGNLYENLTVYENLKIWARF
                     YDMPKAAVEDRIEALLTYFELTERKNSKVATLSKGLKQKVAIMRALIHQPKLLILDEP
                     TSGLDPSAAESLNTYLQKQVREREMTVFMCTHHLQGLEQIADYIFMMDQGRFIASGRA
                     EDLLRETWPQVEFDIHVRDVTRAWALLENEHAVVAKEHSDKEGYLRVKMEAYEDISQV
                     IKLLTEHQLDVYTVTEVQHTIKELYFKKMDVMPHD"
     gene            complement(5497..5571)
                     /locus_tag="PTC28_002069"
     CDS             complement(5497..5571)
                     /locus_tag="PTC28_002069"
                     /inference="COORDINATES: protein motif:HMM:NF017847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF933 domain-containing protein"
                     /protein_id="HDK5717315.1"
                     /translation="MVTFLEGKDYIMQDGDVVHFRFNV"
     gene            5791..6300
                     /locus_tag="PTC28_002070"
     CDS             5791..6300
                     /locus_tag="PTC28_002070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717316.1"
                     /translation="MNKITKFITTLIVIALIVSFTTLGFAEANGYPSQEEIKNDPRTI
                     ELTKEEIAQNKDIVFDDTDEPVMIPRVLPAIPFVASAVFGILAKQGVKTFVKSISKHA
                     LQRAGQRGITKHMMANTLKNGTKYTDKKTGAKILYDKKTGTTLVIKGNKVVTTYKQKK
                     PKKVWRKGH"
     gene            6302..>6654
                     /locus_tag="PTC28_002071"
     CDS             6302..>6654
                     /locus_tag="PTC28_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717317.1"
                     /translation="MISKNIKLQDSSYESSNTSLTLKLKRIENDEDSKIYYLDAVLEF
                     ENEKAETELAVFDFDIDFLKNLEYSFPVTDIYFTEPDISLTVIDYESDELCIYVNLDS
                     GLKHKNESTDSGLSI"
BASE COUNT         2295 a         1305 c         1029 g         2025 t
ORIGIN      
        1 tttttttcaa attcgttttt aataaaatat ttcaaattat aataaccaag tgtattcaac
       61 aaatccacac attttttcat agaactactt tctggaaaaa ataatttatt ttctttcaat
      121 ttatttatca tttgctctgt ggtaaaaggt tggggaggtt ctatcttata atcttcattc
      181 aaaatatcga gctttataga cagcgttaag tccgttgaaa catcaatatg ttcttctttc
      241 aacatagcct tttctaattc actcaaagtt ttttcaacca tcttaacccc tccattttag
      301 acaaaaaaag gccaactctg tttcgcattg ttaagaggcg ttagttggct tctaatactc
      361 ataaaatacc actcttaatt ttaaaagtca atgcttttta ttgattccaa atactttcaa
      421 tttaaaaacc ccatacacct caatagatgt acggggtttt tatatattgg cttacgcttc
      481 gtctttaacg aatggtaata atgccatatg acgtgcacgt ttgatcgctg tagtcaacat
      541 acgttgatat ttagctgaag tccctgtgac acgacgtggt aaaattttac cgcgttctga
      601 gataaaacgt tttaataatt cagtgtcttt gtagtcgata tgtgtaatac cgtttgctgt
      661 gaaataacaa acttttttac gacgacgacc gcctcttctt ggtccacctg ccatgttttg
      721 tgcctccctt actttaaaaa tggttttcta tacgtttcag attgtcatta gaatggtaaa
      781 tcatcatcgc taatatcgat aggaccgttc gcattcgcaa atgggttatc gtgagctggt
      841 tgctgatgat tgttttgata agacgaattt tggccttgtt gttgtccacc gaatccttga
      901 ccgtagctat cgaattgatt gccttggttt tgattcgcgt gacgttggtt ttgtgatttt
      961 ggctcaagga attgaacact atcacatacc acttcagtga cgaatacacg tcggccttct
     1021 tggttttcgt aactgcgtga ttgtaagcga ccgtcaacgc cagcgagact tcctttaaac
     1081 aaaaagttgt ttacattttc tgcttgttta cggaaaacaa cgcagttaat gaagtctgct
     1141 tcacgttccc cttgcgcatt cgtaaatgta cgattaaccg ctaaggtaaa tgtcgctaca
     1201 cttacgcctg agggtgtcgt tctgtattct ggatctttag ttaagcgacc tactaatacg
     1261 actctattaa gcatttacac gcccccaatt attctattac ttgttttcgt cttcacggac
     1321 aacgatgtaa cgaatgatat cgtcattgat tttagctaaa cgttggaatt cgtcagtagc
     1381 tttgttgttt tcagactgga tacgtacgat gttgtagtaa ccatctttga agtcttcaat
     1441 ttcataagct aagcgacgtt taccccagtc cttcgtttct aatacctcag aaccttcaga
     1501 agctaaaatt ccgttaaaac gttcaactac tgctttgcgt gcatcttctt caatatttgg
     1561 acgcacgatg tacattactt catattttct cattgtatat tggcacctcc ttatggtcta
     1621 tgcggcttat caaaattcaa atgataagca aggaataatt ttcattactc acattcaaag
     1681 attgtatcat agccctttac aaattacaac atgtttcaca gattgatcaa tacaatttaa
     1741 tttattgtca tctttactat gtcatctgta catacaaaaa ctcagcatat tctcagtcct
     1801 tcactaactg ttcaatatta atggcttttt atctttaatt aagaaatagt taatttttat
     1861 tgagattaaa aagtgttata ttcttttgtg ttaacaaaaa atcaacgaag aaacagaagg
     1921 gaataaacaa tgaaaactaa atacacagca aaattattaa ttggggcagc aacaatatct
     1981 ttagcaacat ttatttcaca agggaacgca catgcgagcg aacaaactac aggactcgca
     2041 ccggcacaac ctgtcaactt tgattcaatc aatgtaacgc cagaccaaaa aacattctat
     2101 caagtcttac atatggaagg catttcagaa gaccaacgtg aacaatattt gaaacaattg
     2161 cacgaagacc caagtagcgc acaaaatgtt ttttcagaat caattaaaga tgccatccac
     2221 ccggaacgtc gtgttgcgca acaaaatgcg ttttacagcg tattacacaa cgatgactta
     2281 tccgaagagc aacgtgatgc atacattggt agaattaaag aagatccaga tcaaagccaa
     2341 gaagtatttg ttgagtcttt aaatgtggca ccaaaagcag aatcacatga agatcgcctc
     2401 attgaattac aaaacaaaaa tttaatggaa gcaaatgaag cacttaaagc gttacaacaa
     2461 gaagacagca ttcagaataa acgtgcggct caacgtgctg tcaacaaatt gacgccagat
     2521 agcgcgaacg cattccaaaa agaattagat caaatcaatg ccccacgcga cgctaaaatt
     2581 aaagctgacg ctgaagcaaa aaaacaaaca cctgaagtaa gcgcaccaca aattgaagat
     2641 gcacctacta ctgaagttgc accatctcca aaaccaaacg aaacacaaga agagcagaag
     2701 ccaaatgtat caactcctga aaaagataca aataaagctg atgctgaaaa gaaacctgaa
     2761 gtagataaaa gttctaaaac agaaaaaaat acacaaagtg agaaagcacc taaagtagaa
     2821 agtaaagaac aagctgagaa agcgactgaa aacaacaaag gtgctgacac taaaaaagaa
     2881 atgcaacctg caccaagtac agaaagcaac ataaacacaa acaataacgc tgccactcca
     2941 tctgcacctg tattacctga aacaggaaaa gtaacaactt caacacttga aagctactgg
     3001 aatgctttca aagacagtgt gaacaaaggt tatgcttatg taaaagatag tgtgacaaaa
     3061 ggtttagact atttaaaaga acagtataat tatgtttcta aaaaatataa cgatgccaaa
     3121 tactatgcag aattatataa gaaccataaa agtttaattg atacaactgt tcttggtatt
     3181 ttaaatgaaa aaggtacagg tgcctatatt tctccaataa aaattgaaaa ctctttcaat
     3241 ccattctata aatcatatgc acaaacaaga aactttgtaa cagaaggtat taacacaggt
     3301 aaagttttat acacgttata ccaaaatcca acggtagtta aaagtgctct tgcggcagca
     3361 caagctatcg atacagcgaa aaacgcattc aacagtatct tctctttctt caaataaagt
     3421 aaaaatagac atcggacaat tctcatgttc gatgtctatt ttaattcatg ctattttgtt
     3481 aacaatttat ccgagtcaaa ccttttcgaa acagctaaat aaacgatgat atcgactaca
     3541 attaacacga caacgagtat tattgaaatc atcggtccaa acaaaaatac tccgttcgct
     3601 tgtgaaatga taaaaccaat aataggcaat accaatatca ttgacacgga ctgggcggat
     3661 ttgcttgtgt tcactctttg cgacacagcc acaacgagtg aaatagacaa aaaagtaatt
     3721 aatggcgcaa taaagaaagt aaccattatc caactaaagt tcggaaaaat catctcacct
     3781 aacacattga cgccataaac attagcgata ataccataaa tgaatactgc aatccaagtg
     3841 agcaaaatcg atgggattcc tgaaactaaa atctttccga gcatcaattc tttatttgta
     3901 ataggcgtat agagcaaccc ttcaatcgtt ttatgttcct tttcacccgt aaagcttgtt
     3961 gtagctaaca tactagaaac aaataccggt ataaggataa aaaacggaat aaagaaatac
     4021 atcaaaattg cataaaccat gccgtgatga ggatcgatag atttcggtat gacttgttcg
     4081 ggcaactggt caatgaacat tcttgcaccg ccaatataat caacgacact aaaatgaata
     4141 tcaccaatca ctaacgctaa cggtaacacc aaactgaaaa taaatgggat aataaatact
     4201 gatactaaaa ccccacgatc acttttaata tccaatgcgt ccttataaac aattgtgaag
     4261 acatgtttca tattaatcat gcggcatcac atccatcttc ttgaaatata attctttaat
     4321 cgtatgttgt acttcagtga ccgtatagac atctagttga tgttcagtaa gcagtttaat
     4381 gacctgggaa atatcctcat aagcctccat tttcacacgg agataccctt ctttgtcact
     4441 atgttctttg gcgaccactg catgttcatt ttccaataaa gcccatgcac gtgtcacatc
     4501 acgcacatga atatcgaatt ccacttgtgg ccaagtttca cgcaacaaat cttccgctct
     4561 gcctgaagca ataaaacgac cttgatccat cataaaaata taatccgcaa tttgttctaa
     4621 cccttgtaaa tggtgtgtac acataaatac tgtcatttcc ctctcacgca cttgcttttg
     4681 taaataagtg ttgagtgatt cagctgctga tggatccaag ccagatgttg gttcgtctaa
     4741 aatcaatagt ttcggttggt gaataagcgc acgcataatc gccacttttt gcttcaaccc
     4801 tttactcaac gtcgctactt tgctattttt gcgctccgtt aactcaaaat aagttaacaa
     4861 cgcttcaatc ctgtcttcaa ctgctgcttt tggcatatcg taaaagcgcg cccatatttt
     4921 taagttttca tacactgtta ggttttcata caaattccca tcattttgca cacccatttg
     4981 ttgacgtaca cgctcaaaat ggggatctgt cgtctttaca ccaaatactt caatttcacc
     5041 atgcgtcggt tgcagtaaac ctgtcagtaa ccgaactgtc gttgttttcc ctacaccgtt
     5101 cggccctaaa atcgcattaa tcgttcccgg tttcaaagta aaagagatat cattaatcac
     5161 atctttacca tttaacgtct tatgtagttg gttcacacgg actaacatta tcctcacctc
     5221 tttcatcgtt ttttactttt cacaacacga atcacataaa ttttatcact ttttttcaca
     5281 aaatacatta aaattcatca tttttatata aaatcattct aatcacttga tattttttca
     5341 aaataacttg cttgtcatat aaatcacact ttcctatata ctctaagtaa tagtaatcat
     5401 gttctacaca cgcaacagaa gacaccattc ccaacatcca aaaaataaga gctaaaatgc
     5461 tgagtagctc aacattttag ctcttatgag acgcacctac acattaaaac ggaaatgcac
     5521 gacatcacca tcttgcatga tatagtcttt accctctaaa aaagtgacta tgtatttata
     5581 tcaaacgcta tcatatcaag cattttcacg ttgttttctt tcaccaccct tctttaagtc
     5641 aactattatc atttggcttt tattttttaa aaaattttat tatcctcaca aaatatctat
     5701 aaagttttta tattattaac taatgtcttt taataaattt attatttata tcgtgtttgc
     5761 tatatgctat gattaaacga ggggtgtaat atgaataaaa taactaaatt cataacaact
     5821 ttaatagtta ttgcattaat tgtaagtttc acgactcttg gttttgcgga agcaaatggc
     5881 tacccaagcc aagaagaaat aaaaaatgac ccacgcacta tcgaacttac taaggaagaa
     5941 atcgctcaaa ataaagatat tgtttttgat gacactgatg aaccagtaat gattccaaga
     6001 gttcttccag caatcccttt tgtagcttca gctgtttttg gaattttagc taaacaaggt
     6061 gtaaaaactt ttgtaaaatc aatatctaaa cacgctttgc aaagagcagg acaaagaggt
     6121 attactaagc atatgatggc aaacacctta aaaaatggta ctaaatacac cgataagaaa
     6181 acaggagcta aaattttata cgacaagaaa acaggtacta ctttagttat caaaggcaac
     6241 aaagttgtga caacttataa gcaaaagaaa cctaaaaaag tatggagaaa gggtcattaa
     6301 tttgatttca aaaaatataa aactacaaga ttcttcatat gaatcaagta atacttcatt
     6361 aaccttaaaa cttaaaagaa tagaaaatga tgaggacagt aagatttatt atttagacgc
     6421 tgtacttgaa tttgaaaatg aaaaagctga aacagaatta gctgtttttg acttcgacat
     6481 tgattttctg aaaaacttag agtattcatt ccctgtaaca gacatttatt tcacagagcc
     6541 tgatatatca ttgacagtca ttgactatga gagtgatgag ctttgtatat acgttaactt
     6601 agattctgga ttgaagcata aaaatgaatc tactgactct ggattgtcaa taag
//
LOCUS       DANHPA010000109         6546 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.109, whole genome shotgun sequence.
ACCESSION   DANHPA010000109 DANHPA010000000
VERSION     DANHPA010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 6546)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6546)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6546
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.109"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            320..1630
                     /gene="der"
                     /locus_tag="PTC28_002072"
     CDS             320..1630
                     /gene="der"
                     /locus_tag="PTC28_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HDK5717318.1"
                     /translation="MTKPVVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYS
                     SGEWLTHEFNVIDTGGIEIGDAPFQTQIRAQAEIAIDEADVIIFMVNVREGVTQNDEL
                     VAQILYKSKKPVVLAVNKVDNPDMRNDIYDFYSLGFGEPFPLSGSHGLGLGDLLEEVA
                     KHFKKDTSDPYDDDTIRLSLIGRPNVGKSSLINAILGEERVIVSNIAGTTRDAIDTVY
                     SYEGQDYVLIDTAGMRKKGKVYESTEKYSVLRALKAIERSNVVLVVLDAEQGIIEQDK
                     RVAGYAHEEGKAIVIVVNKWDTLEKDSNTMKKFMDEVRKNFQFLDYAQIAFVSAKEKM
                     RLRTLFPLINEASENHKKRVQSSTLNEVITDAIAMNPTPTDKGRRLNIFYATQVAIEP
                     PTFVVFVNDVELMHFSYKRYLENQIRQAFGFEGTPVHIIARKRN"
     gene            1646..2644
                     /locus_tag="PTC28_002073"
     CDS             1646..2644
                     /locus_tag="PTC28_002073"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000161771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HDK5717319.1"
                     /translation="MTNITVFGTGSFGTALANVLADNGHNTLMWGKTSTTIDEINHEH
                     TNHNYLKGVTLNSTIQATTDIQTAIDHSDIYLIALPTKAIREVMSQVNQLLISKKSFI
                     HVTKGIENATFKRVSEMLEDSISPEYNAGIGVLSGPSHAEEVVIKQPTTVSAASSNPE
                     LRKLIQDLFMTDYLRVYTNDDLVGVELGGALKNIIAIASGVLAGMGFGDNAKAALMTR
                     GLAEITRLGVKLGADPLTFQGLGGIGDLIVTCTSTHSRNYSLGYQLGKGKSLDEIMNH
                     MNMVAEGVYTTESVYNLSKKENVEMPITEALYHVLFENQPVEQAVKTLMGRTKKSE"
     gene            2815..3087
                     /locus_tag="PTC28_002074"
     CDS             2815..3087
                     /locus_tag="PTC28_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HDK5717320.1"
                     /translation="MNKTDLINAVAEQADLTKKEAGLAVDAVFEAIQTSLAKGEKVQL
                     IGFGNFEVRERAARKGRNPQTGKEIDIPASKVPAFKAGKALKDAVK"
     gene            3563..4132
                     /locus_tag="PTC28_002075"
     CDS             3563..4132
                     /locus_tag="PTC28_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heptaprenyl diphosphate synthase component 1"
                     /protein_id="HDK5717321.1"
                     /translation="MENTFECLQQQLDKRLNQLNRPQNIHINRTLSQLLDQLDVPLNA
                     KLACLSIDTSMKHLDRISYYHYERDAILIGDLLSAHYYQLLADLKDVELQLQMSQAIV
                     KINELKSYIQHQKDIRTDVNLKDMMITIETLLIQVLMKHYRIQQSFDDIRHQLIQQLD
                     VQQLSYLIDWQTDEINDIIIALQNYTKSK"
     gene            4142..4855
                     /locus_tag="PTC28_002076"
     CDS             4142..4855
                     /locus_tag="PTC28_002076"
                     /EC_number="2.1.1.163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="demethylmenaquinone methyltransferase"
                     /protein_id="HDK5717322.1"
                     /translation="MTKNKANKAQVHEVFQNISGKYDRLNNIISFEQHKVWRKKVMKE
                     MNVQAGTIALDVCCGTADWTIALSQAVGPEGEVTGIDFSENMLKVGEEKTAHMDNIRL
                     VQGDAMALPFDDNTFDYVTIGFGLRNIPDYSKALSEMYRVLKPGGMVVCLETSQPTMP
                     VFKQGYRLYFKFVMPIFGKIFAKSKQEYEWLQQSAFDFPDRETLKKMFEGVNFENVKV
                     RSFTGGVAAMHLAYKPKTN"
     gene            4873..5829
                     /locus_tag="PTC28_002077"
     CDS             4873..5829
                     /locus_tag="PTC28_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HDK5717323.1"
                     /translation="MSKLNLNQEIKKIENTLKQLIQSEDSTLQSAADHLLSSGGKRVR
                     PLFVILSSYVGENPANDAAYRVATALELIHMATLVHDDVIDFSDKRRGKLTIEKKWDQ
                     PTAILTGNFLLARALEHLSYIQDSRIHQTLSHAIIEVCRGELFQFQDQFRAEQSITNY
                     LRRINRKTALLMQLATEVGAMSSHTDDPTIRKMRDIGHHIGMSFQIVDDVLDFTSTEK
                     KLGKPVGSDLRNGHMTLPVLLAMKQNPQLKEKVATLTPGSPTEDFDWCIEQIRQSEAI
                     SQSLNVSQKYLDKASTLLETLPKNEIKPHFRKLIKRLQSRMN"
     gene            5911..6363
                     /gene="ndk"
                     /locus_tag="PTC28_002078"
     CDS             5911..6363
                     /gene="ndk"
                     /locus_tag="PTC28_002078"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HDK5717324.1"
                     /translation="MEKSFVMIKPDAVQRKLIGEIVQRIEQKGLKLVGAKLMTVPQSL
                     AETHYGEHKGKPFYDSLISFITSAPVFAMVVEGENAVAVARHIIGSTNPSEATPGSIR
                     GDLGLTVGRNVIHGSDSVESAEREIGLWFKDEEISSYHTPDETWLYEA"
BASE COUNT         2199 a         1146 c         1264 g         1937 t
ORIGIN      
        1 cgaaatttcg cccatcaaac ttgattaccg ccttatcggt accacttctc gaactttttt
       61 catacttatc ccgataccaa atccacttat attaccgcat tgcattttta acgcaaaagt
      121 caaaacccat ctttctaacc ctattcaaat aaataaaaat gtattcctac actttgtaag
      181 gggatacttt tcaccaatgc ttttgttcgc tacacttcac gtgatataat aacgttgtta
      241 tgtatcgtac attgcgaaat atacttgcac agactgatat atttaatatt taagttattc
      301 atagagagga agaacaagca tgacgaaacc tgtagttgct atcgtggggc gtcctaacgt
      361 aggaaaatct acaattttta accgcatcgt cggagaacgt gtatctattg ttgaagatac
      421 acctggtgtg acgcgtgacc gtatttattc aagcggtgaa tggctcacac atgaatttaa
      481 tgtgattgat acaggtggta tcgagatcgg agacgcacca ttccaaactc aaattcgcgc
      541 acaagctgaa atcgcaattg acgaagctga tgttatcata ttcatggtta atgtacgtga
      601 aggggtcacg caaaatgatg aacttgtggc tcaaatactt tataaatcta aaaaacctgt
      661 tgtattagct gttaataaag tcgataatcc agacatgcgt aatgatattt atgatttcta
      721 ttcactcggt tttggagaac ctttcccact ttcgggctca cacggtctag gtttagggga
      781 cttattagaa gaggtcgcaa aacactttaa aaaagatact tcagatccat atgacgatga
      841 tacaattcgt ttgtcattaa tcggtcgacc taatgtaggg aaatcaagtt tgatcaatgc
      901 cattctaggc gaagaacgcg ttatcgtatc taatattgct ggtacaacta gagatgccat
      961 cgataccgta tatagctatg aaggccaaga ttatgtactt attgatacag cgggtatgcg
     1021 taaaaagggg aaagtttatg aatcaactga aaagtactcc gtattacgtg cattgaaagc
     1081 cattgaacgc tccaatgtcg ttcttgttgt attagatgca gaacaaggca ttattgaaca
     1141 agataaacgt gttgctggat atgcccatga agaaggaaaa gcgattgtga tcgttgttaa
     1201 caaatgggat actttagaaa aagatagcaa tacgatgaaa aagtttatgg atgaggtacg
     1261 taaaaacttc caatttttag attatgcaca aatcgctttc gtatcagcaa aagaaaaaat
     1321 gcgtttacgt acacttttcc cattaattaa cgaagcgagc gaaaatcata aaaaacgtgt
     1381 tcaaagttca acattgaatg aagtgatcac ggatgccatt gcaatgaatc ctacgccgac
     1441 ggataaaggc cgtcgactga atatttttta tgcgacacaa gttgcgattg aaccgccgac
     1501 gtttgttgtc tttgtgaatg acgtcgaact gatgcatttc tcatataaac gttatcttga
     1561 aaatcaaatt agacaagcat ttggatttga aggcacaccg gtacacatca ttgcacgcaa
     1621 acgaaattag atggagggga taaacatgac gaacattaca gtgtttggta caggaagttt
     1681 tggtactgca ttggctaatg tgcttgcaga caatggccac aacacattaa tgtggggtaa
     1741 aacatcaaca acaatagacg aaatcaacca tgaacataca aatcataatt atttaaaagg
     1801 ggttacgctt aattcgacaa ttcaagcgac aacagatatt cagaccgcta ttgaccattc
     1861 agatatttat ttaatcgcac tgccaacaaa agcgattaga gaggtcatgt cgcaagtcaa
     1921 tcaattgctt atttcaaaaa aatcttttat tcatgttact aaagggattg agaatgcaac
     1981 atttaagcgt gtttcagaaa tgttggaaga ctccatttca ccagaatata acgcaggcat
     2041 tggcgtactt tctggtccaa gtcatgccga agaagtggtt atcaaacaac cgaccaccgt
     2101 atcagcagct tcaagtaatc cagaattacg caaattgata caagatttat tcatgacgga
     2161 ttatttacgt gtgtatacaa atgatgatct tgtcggcgta gaactcggtg gtgcacttaa
     2221 aaatattatt gctatcgcga gcggtgtcct tgccggtatg ggctttggtg ataatgcaaa
     2281 agctgcttta atgacacgtg gtttagcaga aattacacgt ttaggcgtta aacttggtgc
     2341 cgatccgctc acattccaag gtttaggtgg cattggtgat ttaattgtaa cgtgtacttc
     2401 tacacattcg agaaactact ctctcggtta ccaacttggt aaagggaaaa gtttagatga
     2461 aatcatgaat catatgaata tggtcgctga aggggtgtac acaactgaat cggtgtacaa
     2521 tctttctaaa aaagaaaatg ttgaaatgcc aattactgaa gcattgtatc atgttttatt
     2581 cgaaaatcaa cctgttgaac aggcagtcaa aacgttaatg ggacgtacaa aaaaatcgga
     2641 ataaagatag aaattgacca ttttcatgac aaaattataa aaaaatcgac aaaaagcgat
     2701 taaatcaacg tttttcttgt ataaatcgtt gcagtcttgc attcgcttgt gttaaagtca
     2761 taccataatg gtaattgaat tatcattaca taacctttga ggaggtgaat tgacatgaac
     2821 aaaactgact taattaacgc tgttgcagaa caagctgatt taactaaaaa agaagctggt
     2881 ttagctgttg atgctgtttt tgaagcaatt caaacatcat tagctaaagg tgaaaaagta
     2941 caattaattg gtttcggtaa ctttgaggta cgtgagcgtg ccgcacgtaa aggtcgcaac
     3001 cctcaaacag gtaaagaaat tgacatccct gcaagcaaag ttccagcttt caaagcaggt
     3061 aaagcattaa aagatgctgt gaaataattc aattattagg aaaggggctg ggacacaatg
     3121 gtgttttcca gcctttccta tgactaatgc cactcataac ttcgtcattt taagactgtt
     3181 caaacgattt gaattcaaac atagacttct tttgtttttt atcattcaaa agtttatcca
     3241 cttcatctcg atttataaac ttctttaaga aagtaatcct tcattctttt tatatcattt
     3301 catttgtgat gtcctatcaa ggcgatacat ctatctccat tgatttgtat atacattttt
     3361 gttccatact ttttaaacaa aatatattca cttcagacga agaaaacctc gtcactttgt
     3421 ttgatacgaa ttttttcagc aacattaaat caagcgacat caaacttcat tcatggcttt
     3481 tatgacaaaa aaagcaaatc agatttaatt tttaggttga tagtgttaag atagagagtg
     3541 attaaaatta gaggtgtgtc aaatggagaa tacttttgaa tgtttacaac aacaacttga
     3601 taaacgattg aaccaactca atcgccccca aaatatacat atcaatcgaa ctttaagtca
     3661 attgttagat caacttgatg tgcctttaaa tgcaaaactt gcgtgtctct ctattgatac
     3721 atcaatgaaa catcttgatc gtatcagtta ctatcattat gaacgtgatg ccatactcat
     3781 aggtgatttg ctgagtgcac actattatca gttacttgct gatttgaaag atgttgaact
     3841 acaacttcaa atgagccaag cgattgtaaa aataaatgaa ttaaaatctt atattcaaca
     3901 tcaaaaggat atacgcactg atgtaaattt aaaagatatg atgattacga ttgaaacatt
     3961 gttaattcaa gtattgatga aacattaccg tatccaacag tcctttgatg atatacgcca
     4021 tcaactgatt caacaactcg acgtgcaaca actgagttat ttaattgatt ggcagacgga
     4081 tgagatcaat gacataatca tcgcattaca aaactataca aaaagtaaat gaggtttcaa
     4141 aatgactaaa aacaaggcaa ataaagcaca agtccatgaa gtgtttcaaa atatttctgg
     4201 caaatatgac cgtttaaaca atattattag cttcgaacaa cataaagtgt ggcgtaaaaa
     4261 agtaatgaaa gaaatgaatg tccaagcagg gacaattgct ttggacgtct gttgtgggac
     4321 tgctgattgg accattgctt taagccaagc agtagggccg gaaggtgaag tcactggaat
     4381 agatttcagt gaaaatatgc ttaaagtggg cgaagaaaaa acggcgcata tggacaacat
     4441 tagacttgtt caaggtgatg cgatggcatt gccgtttgat gacaatacat ttgactatgt
     4501 aacgatcgga tttggattac gtaatattcc agattattca aaagcattgt cagagatgta
     4561 tcgcgtcctg aaaccagggg gtatggttgt gtgtttagaa acaagccaac cgacaatgcc
     4621 tgtcttcaag caaggatatc gtttgtattt taaatttgtg atgcctatct ttggcaaaat
     4681 ttttgcgaaa tcaaaacaag aatatgaatg gcttcaacag tctgcattcg attttccaga
     4741 tcgcgaaact ttaaagaaaa tgtttgaagg tgtcaacttt gaaaatgtca aagtccgtag
     4801 ctttacaggt ggcgtagctg caatgcactt agcttataaa cccaaaacga actaattaaa
     4861 aggtgattat gcatgtcgaa attaaacttg aatcaggaaa ttaaaaaaat tgaaaatact
     4921 ttgaaacagt tgattcaatc tgaggattca acactccaaa gtgctgcaga tcacctttta
     4981 tcatcaggag gtaagcgcgt tcgtccgtta ttcgtgatat tgagcagtta cgtcggtgaa
     5041 aatcctgcta atgatgcggc atatcgtgtt gctacagcgt tagagctgat tcatatggca
     5101 acgcttgtcc atgatgatgt gattgatttc agtgataaaa gacgtggtaa gttaacaatc
     5161 gagaagaagt gggatcaacc gactgcgatt ttaaccggta attttttact tgctcgtgcg
     5221 ttagaacatt tatcttatat tcaggacagt cgtattcatc aaacactgtc acatgcgatt
     5281 atagaagtgt gtcgcggaga acttttccaa tttcaagacc aatttagagc agaacaatcg
     5341 attacgaact atttgcgtcg tatcaatcgt aaaacggcgc tattaatgca gctcgctact
     5401 gaagtgggtg cgatgagttc acacacagac gatccaacga ttcgaaaaat gcgtgatatt
     5461 ggtcatcata tcggcatgag tttccaaatt gttgatgatg ttttagattt tacgagtact
     5521 gaaaagaaac tcggtaaacc tgtcggaagt gacttgcgta atggtcacat gacacttcct
     5581 gtattattag cgatgaagca gaacccacaa ttaaaagaaa aagtcgcaac attaacgcca
     5641 ggttcaccaa ctgaagactt tgactggtgc attgaacaaa tacgccaatc agaagcgatt
     5701 tctcaatctt taaatgtaag ccaaaaatat ctcgacaaag cttcgacgtt attggaaaca
     5761 ttgcctaaaa atgaaattaa accacatttc agaaaattaa taaaaagatt gcaaagcaga
     5821 atgaattaaa catctttcct gttgaaagcg cttcatacaa atgataggat aatcttgtaa
     5881 tacataaaaa cacagggggc attacgcatc atggaaaaaa gttttgtaat gattaaaccg
     5941 gacgcggtac aacgtaaatt aattggtgaa attgttcaac gcatcgaaca aaagggatta
     6001 aagcttgtag gagctaaatt aatgacagtt ccgcaatctt tagctgagac acattacggt
     6061 gaacataaag gaaaaccatt ttacgattca cttatttctt ttattacatc agcacccgtt
     6121 tttgcgatgg ttgttgaagg tgaaaacgct gtggccgttg cacgtcatat tatcggcagt
     6181 acgaatcctt ctgaagcgac acctggttcc attcgtggcg atttaggttt aacggttggg
     6241 cgtaatgtca ttcacggttc agactcagtg gaatctgctg aacgtgaaat tggactttgg
     6301 tttaaagacg aagaaatcag ttcttaccat acaccagatg aaacatggtt atatgaagcg
     6361 taatatttaa acttatttaa tggggcctgg acatttagtt gtctgggccc tcaatttgtt
     6421 tctacacatc atttcgtcat catcattttg taagtctgga ttgtatactt acattgattc
     6481 aaacaatggt cgacaacacc aagtttataa atagaaatta tcgaacttac tttaacaatt
     6541 aaaagc
//
LOCUS       DANHPA010000110         6508 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.110, whole genome shotgun sequence.
ACCESSION   DANHPA010000110 DANHPA010000000
VERSION     DANHPA010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 6508)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6508)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6508
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.110"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            724..1191
                     /locus_tag="PTC28_002079"
     CDS             724..1191
                     /locus_tag="PTC28_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717325.1"
                     /translation="MPQLQDTELRAQHTGKLLAYLSFLFAVCLVIHQVMIVDGQVVTY
                     MLEHSGNKATENSINAINNSLRYIGILYILANAAGVVALKNQHPYLWWFMLAVFISQI
                     FNALLNPPILYTAIFHVKGFFGLIPYALVIVGSLVLAVMMIRVSVKRKSTFNR"
     gene            1260..1493
                     /gene="secG"
                     /locus_tag="PTC28_002080"
     CDS             1260..1493
                     /gene="secG"
                     /locus_tag="PTC28_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499357.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HDK5717326.1"
                     /translation="MHSFFVVLLIIDCIALITVVLLQEGKSNGLSGAISGGAEQLFGK
                     QKQRGVDLFLHRLTIVLSIIFFVLMLGISYFNM"
     gene            1592..2332
                     /locus_tag="PTC28_002081"
     CDS             1592..2332
                     /locus_tag="PTC28_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase"
                     /protein_id="HDK5717327.1"
                     /translation="MKIQLPKPFFFEEGKRAVLLLHGFTGNSSDVRQLGRFLQKKGYT
                     SYAPHYEGHAAPPEEILQSSPHVWYKDVLDGYEFLVEHGYDEIAVAGLSLGGVFALKL
                     SLNRTVKGIVTMCSPMYIKTEGAMYEGVLDYARQFKKYEGKDDETIEREMAAFHPTDT
                     LRELQGTIQEVRDSVDEVIDPILVIQAEQDEMINPDSANVIYDEVMSDEKRISWYKES
                     GHVITIDKEKEAVFEDVYQFLESLDWSE"
     gene            2387..4744
                     /gene="rnr"
                     /locus_tag="PTC28_002082"
     CDS             2387..4744
                     /gene="rnr"
                     /locus_tag="PTC28_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HDK5717328.1"
                     /translation="MNLKEEIIAIIKSADYEPMSVSDFQDALGLSSADSFRDLIKILV
                     ELEQTGMVTRTKQDRYQKQQQKTNSGLVRGTLSQNKKGFAFLRPDDQEMEDIFIPPTK
                     INRAMDGDVVLVEVKKSRGDFRKGKFEGEVKAIESHSIKQVVGTFSEARHFGFVVPDD
                     KRIMQDIFVPKGQELGAVEGHKVLVQITQYSDGTNSPEGQISAILGHKNDPGVDILSI
                     IYQHGIEIEFPDDVLKEAENVPETIQPDELKGRRDLRDELTITIDGADAKDLDDAIAV
                     KKLDNGNTELTVSIADVSYYVTEGSALDREAYDRATSVYLVDRVIPMIPHRLSNGICS
                     LNPEVDRLAMSCRMEIDAQGQVVKHEIFESVIHSNARMTYDAVNRIITDKDAATRAQY
                     PEIVPMLDLAQTLSQQLIAMRKKRGEIDFDIKEAKVIVNEEGIPKEVVTRERGEGERL
                     IESFMLIANETVAEHFNQMEVPFIYRIHEQPKSERLRQFFDFITNFGIMVKGTGEDIH
                     PSTLQNIHEEIAGRPEDMVISTMMLRSMQQARYDADNLGHFGLAADYYTHFTSPIRRY
                     PDLIVHRLVRKYLIEKSMDGRAMHEWEEKLPQIAEHTSNRERRAIDAERDTDELKKAE
                     FMIQHIGDEFEGVISSVANFGMFVELPNTIEGMVNMQNMSDDYYHFDERQMALIGERK
                     AKVYRIGDVVKVKVIHVDVDERQIDFQIVGMPIDVSSKRERDPRGKTIQAKTKGTQFE
                     KTDKKKKRKSRKGKNARQRDKSGNTQHKPFYKGKKVKKKARKKKK"
     gene            4760..5224
                     /gene="smpB"
                     /locus_tag="PTC28_002083"
     CDS             4760..5224
                     /gene="smpB"
                     /locus_tag="PTC28_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HDK5717329.1"
                     /translation="MPKKSGKGTLAENRKARHDYNIEDTIEAGIALQGTEIKSIRRGS
                     ANLKDSYAQVKHGEIFLHNMHIAPYEEGNRFNHDPLRVRKLLLHKREILKLGERTREI
                     GYSIIPLKLYLKHGNCKVLLGVARGKKKYDKRQSLKEKAVKRDMDRAMKQKY"
     gene            5298..5657
                     /gene="ssrA"
                     /locus_tag="PTC28_002084"
     tmRNA           5298..5657
                     /gene="ssrA"
                     /locus_tag="PTC28_002084"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            6124..>6508
                     /locus_tag="PTC28_002085"
     CDS             6124..>6508
                     /locus_tag="PTC28_002085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exotoxin"
                     /protein_id="HDK5717330.1"
                     /translation="MNKKRFVISLLCSITILFVISSSTALADHTLDPTPDQLNKSSEF
                     KGLMGNVKYLYDRNFISESNVKSIDSLLAHDLIFCIRESEIKEYGLVKTEFASKELAQ
                     KYRNKQVDIFGANYYVDCYFSGKEKG"
BASE COUNT         2136 a         1023 c         1396 g         1953 t
ORIGIN      
        1 taatgacgtt agtgatacaa ggatgggtaa taccacctcc taaaaataac ttatctactt
       61 atgaagtttt agaatattat acacaaataa aaggatattt tggctcggat catgtatcaa
      121 aatacatcat atacatagtc ggtttattaa tcccgttgaa tgtatttttt aaattgaaaa
      181 atgacaataa caatattggt aatactgtag ctttattatt tgggtagatt tacttttttg
      241 tgaacggtgt atcattaatt attcaaggta tcactgctga atttgcaccc catttaatag
      301 acaaagaaaa cgttttagga agccatgagt ttgctgttaa tatatttaac tgggtttttc
      361 attatggggg gtatttcctt tagtacatac atcgttgtta atatatatct aacaatatgg
      421 gttatgatta ttgggaaatt agttcaatct aaatcatatg ttttaccatt gttcgttctg
      481 attttaatag tgatgagtat tatgcaatta gagagtgtca gtatggtgtt ttcaatcatt
      541 gacttaatcg cattactctg gatttttatg attactttta aaattagttt tgtggtgcat
      601 gtcgaataag caatcgtttt gtcgctaata cattttacac ctagcaagcc catttaacat
      661 tgattttctt tcatcgtttt aaactgttat aataggctta tatgatatag aaggagcaaa
      721 gaaatgccac aattacaaga cacggagcta cgtgcccaac atacaggaaa gttacttgct
      781 tatctgtcgt ttttattcgc cgtttgttta gtgattcatc aagtcatgat tgtggatggt
      841 caagtggtga cgtatatgct tgaacattcg ggaaataaag cgactgaaaa tagtattaat
      901 gcgattaata acagtttacg ttacatcggc attctataca tactcgcgaa tgcagcaggt
      961 gtggtcgcat taaaaaatca acacccttat ttatggtggt ttatgttagc ggttttcatt
     1021 tcacaaattt tcaacgcgtt actcaatcca ccaatccttt acacagcgat ttttcatgtg
     1081 aaaggtttct tcggtttaat cccgtatgcg ttagtaatcg ttggatcgct cgtactggca
     1141 gtgatgatga ttagggtgag tgtcaaacgc aagtcgacgt ttaatcgata aagcttgttg
     1201 tgaatcgttt aaatatatga taaaatagct ttcgtatatg atgaatggag gacagtctga
     1261 tgcatagttt tttcgtagta ttactcatta ttgactgtat cgcgctcatc actgttgttt
     1321 tattgcaaga aggtaaaagc aatggcttat caggtgccat tagtggtggt gctgaacaat
     1381 tatttggtaa acaaaaacaa cgtggtgtag atttattttt gcatagattg acaattgtac
     1441 tttcgattat tttctttgta ttaatgttag gtatcagtta cttcaatatg tagagtccgg
     1501 ccgttgaaaa gtcggacttt tttgtttgtg tacgccgtat caaaccgata gaatagagtg
     1561 tatgagttat tgaaaggacg agagtttacc gatgaagatt caattaccga aacctttctt
     1621 ttttgaggaa ggaaaacgtg cagtattatt attacacggt tttactggca acagttcaga
     1681 tgtgagacaa ttaggacgct ttttacagaa aaaagggtac acctcttatg cacctcatta
     1741 tgaaggacat gcggccccac cagaagaaat attgcaatcg agtcctcatg tatggtataa
     1801 agatgtgctc gatggttatg aatttttagt ggaacacggt tatgacgaaa tcgctgtcgc
     1861 tggtttatca ttaggtggcg tttttgcatt aaaactaagc ttaaatcgta ctgtaaaggg
     1921 tattgtaacg atgtgctcac cgatgtacat taaaacggaa ggggccatgt atgaaggtgt
     1981 actagactat gcccgtcaat ttaaaaaata tgaaggtaaa gatgacgaaa cgattgagcg
     2041 cgaaatggca gcgtttcatc cgactgacac gttgagagag ttacaaggga cgattcaaga
     2101 agtgcgcgac agtgtggatg aagtaattga tcctatttta gtgatacagg ctgaacaaga
     2161 tgagatgatt aatccagatt ctgctaatgt catttatgat gaagtgatgt cggatgaaaa
     2221 acgaatttct tggtacaaag aatctggtca cgtcattact attgataaag aaaaagaagc
     2281 agtatttgaa gatgtttatc aatttttaga gtcattagat tggtctgaat aaatagccga
     2341 taacacatca attttaacta ttttctaaaa agaaaggagg agcaaaatga atttaaaaga
     2401 agagattatc gcaatcatta aaagtgcaga ttatgaaccc atgtctgtat ctgacttcca
     2461 agatgcatta ggattgagta gtgcggattc atttcgtgac cttataaaga ttttggtaga
     2521 gttagaacaa acaggaatgg tgacgcgtac gaaacaagac cgttatcaaa aacaacaaca
     2581 gaagacaaat tcaggtttag tgagaggaac attaagccaa aataaaaagg gatttgcctt
     2641 tttacgtcca gatgatcaag aaatggaaga catctttatt ccgccgacaa aaatcaaccg
     2701 tgcaatggat ggagacgtcg tattagtcga agtgaagaag tcgcgcggtg attttcgcaa
     2761 aggcaagttc gaaggtgaag tgaaggcgat tgaatcccat tcgattaaac aagttgtcgg
     2821 tacattttct gaagcgcgtc atttcggttt cgttgtacct gatgataaac gcattatgca
     2881 agatattttc gtgccaaaag gtcaagaact tggtgcagta gaaggccata aagtgttagt
     2941 gcaaattacc caatactcag atggtacgaa cagtccagag gggcagattt cagcgatttt
     3001 aggccataaa aatgatccgg gtgttgatat tttatcgatc atttaccaac atggcattga
     3061 aattgagttt cctgatgatg tattgaaaga agcggaaaac gtacctgaaa caatacaacc
     3121 cgatgaactt aaaggccgtc gtgatttaag agatgaactg acgattacaa tcgatggtgc
     3181 agatgcgaaa gatttagatg acgccattgc tgtgaaaaag ttggacaatg gcaacacgga
     3241 attgacagtc agcattgcgg acgtgagcta ttatgtcact gaaggttcag cgttagaccg
     3301 tgaagcgtat gatcgtgcga caagtgtcta tttagtcgac cgtgtcattc cgatgattcc
     3361 gcaccgattg agtaatggga tttgttcgtt aaatcctgag gtcgaccgtt tagccatgag
     3421 ttgtcgaatg gaaattgatg cacaaggtca agtggtcaaa cacgagattt ttgaaagtgt
     3481 gattcattct aacgcacgta tgacttatga cgcggtaaat cggatcatta cagataaaga
     3541 tgcagcgaca agagcacaat atccagaaat tgtgcctatg ttagatttag cccagacgtt
     3601 atcacaacaa ttgattgcga tgcgtaaaaa acgtggcgaa atcgactttg atattaaaga
     3661 agcgaaagtt atcgtaaacg aggaagggat tccgaaagaa gtcgtgacac gtgagcgcgg
     3721 tgaaggtgaa cgtttaatcg aatcatttat gttgattgca aacgaaacag tggcagaaca
     3781 tttcaatcaa atggaagtgc cattcattta ccgtattcac gaacagccga agtcagaacg
     3841 tctccgtcag ttttttgatt ttattacgaa ctttggcatt atggtcaaag gaacaggcga
     3901 agatattcat ccaagtacgt tgcaaaacat tcacgaagag attgctgggc gaccggaaga
     3961 tatggtcatt tcaaccatga tgttacgttc aatgcaacaa gcacgttatg atgccgataa
     4021 cttaggccat ttcggtttag cggcagatta ttatacgcat tttacgtcac caattcgtcg
     4081 ctatccagac ttgattgttc atcggttagt gcgtaaatat ttaatcgaaa agtcgatgga
     4141 tggtcgtgca atgcatgaat gggaagaaaa gctcccacaa attgctgagc atacatcaaa
     4201 tcgtgaacgt cgtgccattg acgcagaacg tgatacggat gaactgaaaa aagcggagtt
     4261 tatgattcaa catattggtg atgaatttga aggtgtcatc agttctgtcg cgaattttgg
     4321 tatgtttgta gagttgccca acacgattga aggtatggtc aacatgcaaa atatgtctga
     4381 tgactattac cattttgatg agcgccaaat ggcattgatt ggtgaacgaa aagcgaaagt
     4441 ttaccgcatt ggtgatgtcg taaaggttaa agtcattcat gttgatgtgg atgaacgtca
     4501 aatcgatttc caaattgtag gtatgccaat tgatgtaagc tcgaaacgtg aaagagaccc
     4561 acgtggtaaa acgattcaag cgaaaacaaa aggcactcaa tttgagaaaa ctgataaaaa
     4621 gaaaaagcgt aaatcacgta aaggtaaaaa tgcgagacaa cgtgacaaat caggtaatac
     4681 acaacacaag ccgttttata aaggtaaaaa agtaaagaaa aaggcacgaa aaaagaaaaa
     4741 ataatttgag gtgaaaccaa tgccaaaaaa atcaggaaaa ggcacattag cagaaaatcg
     4801 taaagcgcgc catgactata acatcgagga cacgattgaa gcgggcattg cgttacaagg
     4861 gacggaaatt aaatcgattc gtcgtgggag tgccaattta aaagatagtt acgcacaagt
     4921 gaaacatggt gaaatcttct tgcataatat gcacattgcg ccttatgaag aggggaaccg
     4981 ttttaatcat gatccgctac gtgtacgtaa actgttatta cacaaacgtg agattttgaa
     5041 attaggcgaa cgtacgcgtg agattggtta ttcgattatt ccgcttaaat tgtatttgaa
     5101 acacggcaat tgtaaagtat tattaggcgt tgcacgtggt aagaaaaaat atgataagcg
     5161 tcaatcatta aaagaaaaag cggttaaacg tgatatggac cgtgcgatga aacaaaaata
     5221 ttaagaattt gcgaagtatg tcaatttttg atatgatata atgtgctttc atataacgga
     5281 agcacattga atactacggg gacgtttatg gattcgacag gggtcccccg agctcatgaa
     5341 gcgtgtcgga gggttgtctt cgttaccaac acatcagttt ataataactg gcaaaactaa
     5401 caataatttc gcagtagctg cctaattgca ctctgcatca cctaacagca tcgcctatgt
     5461 gctgttaacg tgattcaact ttagtaggat acgctcgtca ctgccgtttg aagtctggcg
     5521 agaagaggta aatcaaacta gcatcatgtt ggctgtctat cgccttgcat gatgtgaaat
     5581 tgaacgatag actacacacg tagaaacatt tgtatcagga cctttggacg cgggttcaaa
     5641 tcccgccgtc tccactacat gtaacctaat tgctaatatt cggattttaa aaacacctta
     5701 caaacattga tgtataaagt ttgtaaggtg tttttcatta ttttgatatt tgggtcattt
     5761 tatggtcaaa aaatatacgt tgaccaaaaa tgttgaccct ctccatacaa attatactta
     5821 atatattgat ataacaacgt ttttgaaaac caagtgtcaa taaagtgtca aatgtatagc
     5881 actctggcat tgcgaccttg cttttttgtg ttgaatgaaa gctatcattt tgtgaacatg
     5941 accaatgatg gacaaaccta acagtcatgt caatgtagca gttgtcaaac aggacgagtg
     6001 agaaacgttt atatgtctgt ttttatataa tcccaacttg agtagacaat tgtttatata
     6061 atttaattat tatattatga gtatatatag atattcttgg atttttggat ggaggagaaa
     6121 agtatgaaca agaaacgatt tgtcatcagt ttattgtgta gcattacaat cttattcgtt
     6181 atttcaagtt ctacggcttt agcagaccat acgctagacc caaccccaga ccaattaaac
     6241 aaatcaagtg aatttaaagg tttgatgggg aatgtgaaat atttatatga ccgaaatttt
     6301 atatctgaga gtaatgttaa atctatcgat agtttattgg cacacgattt aattttctgt
     6361 ataagagagt ctgaaataaa agaatatgga ttagtaaaaa cagaatttgc gagtaaagaa
     6421 ttagcacaaa agtatagaaa taaacaagtc gatatttttg gtgcaaatta ttatgttgat
     6481 tgttatttct ctggaaaaga aaagggga
//
LOCUS       DANHPA010000111         6471 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.111, whole genome shotgun sequence.
ACCESSION   DANHPA010000111 DANHPA010000000
VERSION     DANHPA010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 6471)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6471)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6471
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.111"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(48..268)
                     /locus_tag="PTC28_002086"
                     /pseudo
     CDS             complement(48..268)
                     /locus_tag="PTC28_002086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001095317.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            765..1712
                     /locus_tag="PTC28_002087"
     CDS             765..1712
                     /locus_tag="PTC28_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HDK5717331.1"
                     /translation="MKPVYFNHDGGVDDLISLFLLLHMDDVQLIGVSAIGADSYVEPA
                     ESASRKIINRFSKYPLDVAASEERGKNPFPKDWRMHAFFMDALPILNERVPVQSRLRE
                     IHAYEDIIERIESAHQPVTLLFTGPLTDLAKALEVAPHITQKIERLVWMGGTFLERGN
                     VEEPEHDGTAEWNAFWDPEAVETVFNSDIAIDMVALESTNQVPLTLDVRQMWADERHY
                     PGVDFLGVSYAAVPPLTHFQTNSTYFLWDVLTTAYIGKPELVKKEKVKASVDTKGPSQ
                     GRTYLDEIHGREIQVINHVERDAFFQYITDLAKKVGTDL"
     gene            complement(1826..4822)
                     /locus_tag="PTC28_002088"
     CDS             complement(1826..4822)
                     /locus_tag="PTC28_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase"
                     /protein_id="HDK5717332.1"
                     /translation="MEFNFHTNVNIQHVNMLPRTAYKLPYTSIEEYQTHPERHHMHRV
                     TSLNGEWDFQYFASLDHFRQRSSYAQKGIITVPSVWNLQGYDQLQYCNVQFPIPFDLP
                     HVPDNTSCGYYEKIFTIKNYQEGLDYHLTFEGVSGAHYIWVNGEFVGYAQISHALSQF
                     DITERVTEGDNHIAVLVLKYSDATYFEDQDMFRHSGIFRDVYIVARQRERLNDYQIHT
                     TIGDRVGYIDVTVQDVAEGVALHYQLLNPDQRSITEGTLNERMTRISVPEPRLWSAEH
                     PDLYTLIIEANGEYFVQRVGIREVKIAQQQLWMNGQAVKLRGVNYHDSHPQTGYTVTE
                     EQLIKDLTLMKKANFNAIRTAHYPKSPRFYELTDQYGFYVMSEADLETHGVVLLYGDE
                     NLDDFNLIMDDPRYEQAVVDRIDASIVPFKNFSSIISWSMGNESGYGCNMERGLAHAK
                     ALDASRLLHYEGAHYAESHHDRSNLDMISRMYPSPEEIETRYLTKPNLDKPFVLCEYA
                     HAMGNSPGGLKAYHELMERYDSFIGAFVWEWCDHAIQVGVKEGRPMYRYGGDFGEKVH
                     DGHFCVDGIVSPQRTPHAGYYEFQQVHRPLVFIAREGTRLTFKNKLDFTNIHDYVTLQ
                     IMVTTITGETATFTVDAPYIEPHAQGELDIAPYVHLDIKDLSTCTIQYILKAGHPLLT
                     SGERIGHDQVVFQRIESTHFVPETTEIPLYLNETETTIQVKRGRWCYILDKHTANLQQ
                     VSHQQTMLLSEGSQLNIWRAPTDNDIQIQQGWRTAKYDTAYPKVYHTHVQQQEDHVII
                     TFDMSMVEDSRPRLVEGIVTWTISEDGTIHVAHQLKKDVRMPSLPRLGVTFGLPDRFQ
                     ALTYYGQGPYESYQDKQEASYLSVFNTTVRDQYEHPIFPQEVGAHIDTTYVGLHDGNY
                     TCAVWSETPLSMNAKPYSDAMLTEANHDDELEETGVSYLHIDTAQSGIGTNSCGPELP
                     EQYRLLQEHYHFDFKLKFYEQTSITE"
     gene            complement(4850..6229)
                     /gene="melB"
                     /locus_tag="PTC28_002089"
     CDS             complement(4850..6229)
                     /gene="melB"
                     /locus_tag="PTC28_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="melibiose:sodium transporter MelB"
                     /protein_id="HDK5717333.1"
                     /translation="MKQQLSQIQKLSFGFGAIGKDAIFNIVSLYLMYYITDIVGLSPA
                     FVGILFFIARIWDAINDPFMGMIVDNTHNRFGKFKTWLVIGTVINAVVTVLLFTHFDL
                     PGIWMYVYIAVMYILWGMTYTMMDIPYWSWLPNLTHQAKEREALSVIPRFFASLAAFT
                     VGTFGLYFIELLGHGNASTGIFIFAVVCSVVFILTIAITVIVVPEDRAMEEQEGIKVR
                     FRDIKRILFQNKELLAMMGVLLTFNLCVQTLNGTIIYYFKYVVAMPHFFSYFNAMILA
                     EMTGLLMLPFWIRQVGRQVAFNSAITAIVGGLTVILIFGWFDPKALIWVIIGAMILRI
                     GTGFMIGITTIAIADVIDYGEVKFGHRNESIITSTNTFLTKTSQAISALIVGLGLSIL
                     GFVPNETQSIATQNGLRIMVIVAPIILVFISALLYHKAFHLKGDYLRDIERTLTFKRQ
                     REQQLNSNE"
BASE COUNT         1967 a         1363 c         1189 g         1952 t
ORIGIN      
        1 attataaaaa tgtcaatagc ggtttgaaag tgtcgttttt tggcggttta agaatgacgt
       61 atgtttaaac ttttttcact tttatagtct ttaagtcggt atgaatcgcc taaattttaa
      121 atatttttga atggtgaata agtctatcaa taatggctgc tgacgctatc ttgttactaa
      181 atgagtcgcc ccaactagaa aaagggatat tcgtcgttat gatcgtggat ttcatttcat
      241 atcttagtga tatcaattga tagaagagtt tctttgctag tgtatcgtgc attttaaatg
      301 atttagatcc tttaaaagtt aaattggcag tagtggcaga tactaaaaga caagggtacg
      361 ttttgttagc tacagcacca tattcctatt tcacttgtat cagataactt aaaagcaggg
      421 gtaattaaaa attcaaaaac aggtataata cttaaccctg gttatgaaga tatagccact
      481 cactttagaa caatcataat accaacacgc gttcgtaaac caaaagataa agttacagta
      541 gaaaatactg ttaagcaatt aacaacttac ctatattgtt cactagtaat tttaccacat
      601 caaaaattaa aaattggcat ctataattca agaggattat ttctttctgt attttcgaca
      661 ttccaccgaa cttctgatgt atagacttgc ggatgtatac gagacattgt acattttaga
      721 cagagcgtgt gagacgactc aattttaatt tgaaggagaa caacatgaaa ccagtttatt
      781 tcaatcatga tggtggtgta gatgatttaa tttcgttatt tttactttta catatggatg
      841 atgtgcaact tatcggtgtg agcgctattg gggcagacag ttatgttgag cctgctgaaa
      901 gtgcttcacg aaaaatcatt aaccgcttct caaaatatcc gctagatgtg gcagcgtcgg
      961 aagagcgagg taaaaatccg tttccgaaag attggcgtat gcatgccttt ttcatggatg
     1021 cattaccaat tttaaatgaa cgtgtaccag tacagtctcg tttgagagag attcatgctt
     1081 atgaagatat cattgagcgt atcgaaagtg cccatcaacc tgtaacatta ttatttacag
     1141 gacctttaac ggacttagcg aaagcgttag aagttgcgcc acacattacg caaaaaatcg
     1201 aacgcctcgt gtggatgggc gggacatttt tagaacgtgg taatgtcgaa gagcctgaac
     1261 atgatggtac agcggagtgg aatgcatttt gggatcctga agctgtggaa actgtgttca
     1321 acagtgacat cgcgattgat atggtcgcat tggaaagtac gaatcaagtc ccattaacat
     1381 tagatgtccg tcaaatgtgg gcagatgaac gtcattatcc aggcgtggac tttttaggtg
     1441 tgagttacgc tgcagttcca ccactgacac atttccaaac gaactccact tactttttat
     1501 gggatgtatt gacgacagct tatatcggta aacctgaact cgttaaaaag gaaaaagtga
     1561 aggcgtctgt tgatacgaaa ggaccgagtc aaggccgcac ataccttgat gaaatacatg
     1621 gtcgtgaaat tcaagtgatt aatcatgtcg aacgtgatgc ctttttccaa tacattacgg
     1681 atttagcgaa aaaagtcggc acggatttat aagtcacttt taataaaaag aggctatgga
     1741 tttctgatat gctccctcca aagttttcat tttttcaatg tccacttcgg agggagcata
     1801 tcagaatgtc cccgcctctt cttttttatt ctgttattga agtttgttca taaaatttga
     1861 gtttaaagtc aaagtgataa tgttcttgta gtaatcggta ctgctcgggt aattccggtc
     1921 cacaactatt cgtgccgata ccgctctgtg ctgtatctat atgcaaataa ctcacgcctg
     1981 tttcttctaa ttcatcatca tgatttgctt cggtcaacat cgcatcggaa tatggtttag
     2041 cattcatact gagtggcgtc tctgaccaaa cggcacatgt atagttccca tcatgtagcc
     2101 ctacataagt ggtatcgata tgcgcgccga cctcttgagg gaaaatagga tgttcatatt
     2161 gatcacgaac agtcgtattg aacacagata aataactcgc ttcttgctta tcttgatagc
     2221 tttcgtatgg accttgtccg taatacgtca gtgcttggaa gcggtccggc aagccgaatg
     2281 ttacacctaa tcttggtaag ctcggcatgc gcacgtcttt ctttaattga tgtgccacat
     2341 gaatcgtacc gtcttcggat atcgtccatg tcactatccc ttcaactaaa cgcggacgtg
     2401 agtcttccac catgctcata tcaaatgtga taatcacatg gtcctcttgt tgttgcacat
     2461 gcgtatggta cactttcgga taagctgtat catacttcgc tgtacgccaa ccttgttgaa
     2521 tttgaatatc attgtctgtc ggcgcacgcc aaatgttcaa ctggctacct tctgatagta
     2581 acattgtctg ttgatgagac acttgttgta agtttgctgt atgcttatcc aatatatagc
     2641 accatctccc gcgcttcact tgaatagtcg tttccgtctc attcaaatac aatgggattt
     2701 ccgttgtctc cggtacaaaa tgtgtacttt cgatacgctg aaagacgact tgatcatgac
     2761 ctatacgttc tcccgaagtc aataaaggat gacctgcctt taaaatatat tggatcgtac
     2821 atgtgctcaa gtcctttatg tcaagatgaa catatggcgc aatatccaac tcaccttgcg
     2881 catgtggttc aatataaggg gcatccactg taaatgttgc tgtctcacct gtaatcgttg
     2941 tcaccattat ttgaagtgtt acatagtcat gaatattcgt aaagtccaat ttgtttttaa
     3001 acgttaaacg cgtgccttca cgtgcaatga aaacgagcgg acgatgcact tgttgaaatt
     3061 cgtaataacc tgcatgtggg gtgcgttgag gactcacaat accatctaca caaaaatggc
     3121 cgtcatgcac cttttcacca aagtcgccac cgtaacgata catcggacgc ccctctttca
     3181 cccctacttg tatcgcatgg tcacaccatt cccacacgaa agcaccaata aagctatcat
     3241 aacgttccat caactcatgg tacgccttta acccacctgg agaattcccc atcgcatgtg
     3301 catattcaca taaaacaaac ggcttatcca agttcggttt cgttaaataa cgcgtttcaa
     3361 tttcttcagg tgacggatac atgcgtgaaa tcatatctaa atttgaacga tcatgatgtg
     3421 actcggcata atgggcccct tcataatgga gtaggcgaga tgcatccaac gctttcgcat
     3481 gtgcgagacc acgttccata ttacaaccat agccagattc attccccatt gaccacgaaa
     3541 taatcgaact aaaattttta aacgggacta tcgatgcatc aatacgatca acaacagctt
     3601 gttcatagcg gggatcatcc atgattaggt tgaagtcatc taaattttca tcgccataca
     3661 aaagcaccac gccatgtgtt tctaaatccg cttcactcat cacataaaag ccatattgat
     3721 cggttaattc ataaaagcga ggacttttcg gataatgtgc cgtacgaatc gcattgaaat
     3781 tcgctttttt catgagtgtt aaatctttga tgagctgttc ttccgtcacc gtataccccg
     3841 tttgtgggtg gctatcgtga taattgaccc cgcgcagttt cacagcttgt ccattcatcc
     3901 aaagttgttg ttgcgcaatc ttcacttctc gaataccgac gcgttgtacg aaatattcac
     3961 cattcgcttc aatgatcagc gtatacaaat caggatgttc agcactccat agtcgcggtt
     4021 ccggtacaga gatgcgcgtc atcctctcat tcagtgtccc ttcagttatg ctacgttggt
     4081 ccggattcag taattgataa tgaagcgcca caccttctgc aacatcttgt acagtgacat
     4141 cgatataacc gaccctgtca ccgatcgtcg tatgaatttg gtaatcattc aaccgttcac
     4201 gctgacgtgc aacaatatac acatcacgaa aaatgcctga atgacggaac atatcttggt
     4261 cttcaaaata cgtcgcatca gaatatttca atacgagcac tgcaatatgg ttatcacctt
     4321 ccgtcacccg ttcagtaata tcaaactgag aaagtgcgtg cgaaatttgt gcataaccga
     4381 caaactctcc attcacccaa atataatgcg caccactcac accttcaaat gttaaatgat
     4441 aatccaaacc ctcttgataa tttttaatcg taaaaatctt ttcataataa ccacacgatg
     4501 tattatctgg cacatggggt aaatcaaatg gaatcggaaa ctgcacatta caatattgta
     4561 gttggtcata accttgtaaa ttccaaacac taggcaccgt gatgataccc ttttgcgcat
     4621 atgatgaacg ctgacgaaag tgatcgagtg atgcaaaata ttgaaaatcc cattccccat
     4681 tcagtgacgt cacacgatgc atgtggtgac gctcaggatg cgtttgatat tcctctatac
     4741 ttgtgtaagg gagcttgtat gctgttcggg gtaacatgtt cacatgttgt atgttgacat
     4801 tcgtatgaaa attaaattcc ataaaaagaa cctcctcata gattacatct tactcgtttg
     4861 aatttaattg ttgttctctt tgacgtttaa aagttagcgt ccgttcgata tctcttaaat
     4921 aatcaccttt aagatggaat gctttatggt ataacaacgc actgatgaac actaaaataa
     4981 taggcgctac aatcaccatg attcgcaaac cattttgtgt cgcaatactt tgtgtttcat
     5041 tcggtacaaa acctaaaata gataatccta atccgacaat taatgcagaa atggcttgtg
     5101 aagttttcgt caaaaatgta ttggttgaag taataatgct ttcattacga tgaccgaact
     5161 tcacttcacc ataatcaatc acatccgcaa tcgcaatcgt agttatccca atcataaatc
     5221 ccgtacctat tcttaaaatc atcgcaccga tgataaccca aatcagcgct ttaggatcaa
     5281 accaaccgaa aatcagaatc accgttaagc cacctacaat ggcggtaatc gcactattaa
     5341 atgcaacttg acgaccgact tgcctaatcc aaaatggtaa catcaataat cctgtcattt
     5401 cagctaaaat cattgcatta aagtatgaaa aaaagtgcgg catcgcaacc acatatttaa
     5461 aatagtagat gattgtccca ttgagggttt gtacacataa attaaatgtt aacaaaacgc
     5521 ccatcattgc cagtaattct ttattttgaa ataagattcg ttttatatct cgaaaacgga
     5581 ctttaatccc ttcttgctct tccattgcgc gatcttctgg tacgacaatg actgttatgg
     5641 caatagttag aataaaaact acactacaaa ccacagcaaa tataaaaatc ccagtcgatg
     5701 cattgccatg acctaatagc tcaatgaaat acaacccgaa tgtccccacc gtaaatgccg
     5761 caagacttgc aaaaaaacgc ggaatcacgg ataaagcttc ccgctctttt gcttgatgcg
     5821 tcaaatttgg caaccaagac cagtacggaa tgtccatcat cgtatacgtc atcccccaca
     5881 aaatgtacat cactgcgatg taaacgtaca tccatatacc aggtaaatca aaatgggtaa
     5941 ataataaaac agttacgacg gcattaataa ctgtgccaat cactagccat gttttgaatt
     6001 tgccgaaccg gttatgtgtg ttgtcgacaa tcatacccat aaaggggtca ttaatcgcat
     6061 cccatattct tgctataaaa aagagtatac ctacaaaagc tggcgaaaga ccgacaatat
     6121 cggtgatgta atacataaga taaagactaa ctatgttgaa gatcgcatct ttgccaattg
     6181 cgccaaagcc aaatgagagt ttttgtattt gtgatagttg ttgcttcaaa tacgaacacc
     6241 ttcttttctt tttttaaaac gctttcatac acaaataaaa tatcatgttt cttgaaggtg
     6301 taatattgtt ctatggtgat aaatcatgtc aaaatgtttc ctgtttacta atttataaga
     6361 aacattttat cgttttccat gaacaaacgt cattctcttg atatcatccg caagtcgcaa
     6421 tgcaaaatga caacattcaa cttttatgat tcaatagcac gtttaaacga a
//
LOCUS       DANHPA010000112         6383 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.112, whole genome shotgun sequence.
ACCESSION   DANHPA010000112 DANHPA010000000
VERSION     DANHPA010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 6383)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6383)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6383
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.112"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(291..2750)
                     /locus_tag="PTC28_002090"
     CDS             complement(291..2750)
                     /locus_tag="PTC28_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HDK5717334.1"
                     /translation="MLFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEG
                     IAAKVLESFDITEDKVIEEVEKLIGHGQEQMGALHYTPRAKKVIELSMDEARKLQHNF
                     VGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGSPEMSNKNAQSAKSNNT
                     PTLDGLARDLTVIARDGTLDPVVGRNSEITRVIEVLSRRTKNNPVLIGEPGVGKTAIA
                     EGLAQAIVNNEVPETLKGKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHHAGNVIL
                     FIDEMHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKHIEKDAALERRF
                     QPVQVNEPSVADTIAILKGLRDRYEAHHRINISDEAVEAAAKLSDRYVQDRFLPDKAI
                     DLIDEASSKVRLKSHTTPTNLKEIEQQIEQVKKEKDAAVHAQEFENAANLRDKQTKLE
                     KQYEEAKNEWQNHQGGQHTTLVAEDIAEVIAGWTGIPLTRLNETESERLLNLEDTLHE
                     RVIGQNDAVIAISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGEE
                     DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHP
                     DVFNILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQDQRFAGFGGSSEGQDY
                     ETIRKTMMKELKSAFRPEFLNRVDDTIVFHKLNKDELKEIVTMMVGKLTSRLSEQNIN
                     VRVTEAAKDKITEEGYDPEYGARPLIRAIQKTVEDNLSELILEGKELEGKNVTVDYDG
                     ETFQYDIHERETNEDKEVTES"
     gene            complement(2766..3770)
                     /locus_tag="PTC28_002091"
     CDS             complement(2766..3770)
                     /locus_tag="PTC28_002091"
                     /EC_number="2.7.14.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein arginine kinase"
                     /protein_id="HDK5717335.1"
                     /translation="MMHNLDQHMSDWMKKVNAQPVIMSSRIRLARNLENYVHPLMFPS
                     EAEGHRVINEVQDVLTDLNVLRLDELDQLSKYKLVAKHLISPELTKQPASAVLLNEDE
                     SVSVMVNEEDHIRIQAMGNDLSLNELYQKASAIDDILDRTLQISYDEQLGYLTTCPTN
                     VGTGMRASVMLHLPGLSIMKRMNRIAQTINRFGFTIRGIYGEGSQVYGHIYQVSNQLT
                     LGKSEQEIIDALTELVDQIIHEELALRERLNEHNHTETLDRIYRSLGILKYSRLISVE
                     EASHRLSDIKLGVDLGILDMEDFRFNELMVAIQSPFLIDETDEQSIEAKRAEILRTYI
                     "
     gene            complement(3760..4290)
                     /locus_tag="PTC28_002092"
     CDS             complement(3760..4290)
                     /locus_tag="PTC28_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrB/UvrC motif-containing protein"
                     /protein_id="HDK5717336.1"
                     /translation="MKIDKRELDKQQNKHLEFHPIQAYDQSGYDQSDEQWHEGDDVEG
                     TFVIQQILQHLAAKHGLNVDQVVYREQKRCPNCQMTLKDIAHVGKFGCAQCYETFKED
                     VYDIVRRVQGGHIEHSGKCPKSSQHKRALKKQLEEKRARLELLVAQQAFEEAAIVRDE
                     IQALEQQSEVSQQDDA"
     gene            complement(4304..4765)
                     /locus_tag="PTC28_002093"
     CDS             complement(4304..4765)
                     /locus_tag="PTC28_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000551761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CtsR family transcriptional regulator"
                     /protein_id="HDK5717337.1"
                     /translation="MHNMSDIIEQYIKQLFEEAQDDVVEIQRANIAQRFDCVPSQLNY
                     VIKTRFTNEHGYEIESKRGGGGYIRITKVETKDQNNYIKRLMELIGPALSQQQALYII
                     DGLRENQLITDREAKMIAAVVDRETLKMDVASRDIIRANILKRLLPVINYY"
     gene            4930..6135
                     /locus_tag="PTC28_002094"
     CDS             4930..6135
                     /locus_tag="PTC28_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020363115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HDK5717338.1"
                     /translation="MHILIGVIGIGVFLALAFIGSSDKKGIRWKYIGIMFVIQLILAY
                     ALLKTKIGITIVGGIATGFGYLLKQAGVGIDFVFGGLVNNGQMSFFLSVLLPIVFISA
                     LIGILQYTKILPLIINILGFLISKINGMGRLESYNAVAAAILGQSEVFISLKKQLPYI
                     TKQRLYTLTASAMSTVSASIIGAYFTLVQPKYVVTAVVLNLLGGFIIASIINPYKVDE
                     EEDKLLLEEEKKKQSFFEMLGEYILDGFKVAVIVGAMLIGYIALISLLNGLVGGLISL
                     ISGGALDWNFQTLIGFIFAPLAFLTGIPWSDAVEAGSIMATKLLSNEFVAMTELGKAS
                     GLSERSLGIVSVFLVSFANFSSIGIISGAIKSLNDEKGDMVARFGLKLLFGATLVSFV
                     SAAIAGFFL"
BASE COUNT         1755 a         1359 c         1092 g         2177 t
ORIGIN      
        1 tcattaatta agaattgtgt aataagtaat ttactttgtt tagaaaaaag acatctctcg
       61 actgttcaac gtaaagaaag cattagatat tgattttatt ccttttatta atattacttt
      121 tatctgttaa aaatcaataa ggtttcgatt aattcacacc tcacgccaaa catcatcaac
      181 tgactcttat taagaacaca gtcgactttg caacattgca aatttcacac aaaaaaagca
      241 gcggagacat ctcaaaaaag agaatgcctt cactgcttta atcgagtaac ttatgattct
      301 gtgacttcct tatcttcatt cgtttcacgt tcatgaatat catattggaa tgtttctcca
      361 tcatagtcta cagtcacatt tttaccttct aactctttac cttctaaaat caattcactc
      421 aagttatctt caaccgtttt ttggatcgca cgaatcaatg gacgtgcacc atactctggg
      481 tcgtagcctt cttcagtaat cttgtctttc gccgcttctg tcacacgtac attaatgttt
      541 tgttcagaaa gacgactcgt caatttgccg accatcattg taacgatttc tttcaattcg
      601 tctttattta atttatggaa aacaatcgtg tcatccacac ggttcaagaa ctcaggacgg
      661 aatgcacttt tcagttcttt catcatcgtt ttgcgaattg tttcatagtc ttgaccttct
      721 gaactaccac cgaaacctgc aaaacgttgg tcttgaagtt cttgcgcgcc gacattggat
      781 gtcataataa tcactgtatt tctaaaatcc acacgacggc cttttgtatc agtcaaatgc
      841 ccatcatcta atacttgtaa aagaatgtta aagacatctg ggtgtgcttt ttcaatctca
      901 tcaaacaaga taacagaata aggtttgcga cgtacttttt cagtcaattg accgccatca
      961 tcgtgaccaa catatccagg aggcgcccca acaagacgac tcaccgcatg tttctccatg
     1021 aactcactca tatcaacacg aatcatcgca tcttcttcac caaacatcgc ttcagctaat
     1081 gcacgtgcaa gttcggtttt accgacacct gttggcccta agaagatgaa gcttccgatt
     1141 ggacgtttcg gatctttcaa acctgcacgc gcacggcgta ctgctttaga aatagcgatt
     1201 accgcatcat tttgtccgat tactcgctca tgcaatgtgt cttctaaatt cagtaaacgt
     1261 tctgactccg tttcattcaa gcgtgttaat gggatacctg tccaacctgc gatcacttca
     1321 gcaatatctt cagcaactag tgttgtatgt tggccccctt gatgattttg ccattcgttt
     1381 tttgcttctt catattgttt ttcaagtttt gtttgtttgt cacgtaagtt tgcagcattt
     1441 tcgaattctt gtgcgtgcac tgctgcatct ttttcttttt tcacttgctc gatttgttgt
     1501 tcaatttctt ttaagttcgt tggtgttgta tggcttttca agcgcacttt tgaactagct
     1561 tcatcaatca agtcaatcgc tttatctggt aagaaacggt cttgtacgta tcgatcactt
     1621 aattttgctg ccgcttccac cgcttcatct gaaatattaa ttctatggtg cgcttcgtaa
     1681 cgatctcgta aaccttttaa gattgcaatt gtatctgcta cgcttggttc attgacttga
     1741 acaggttgga aacgacgctc aagtgcagca tctttttcaa tatgcttacg gtattcatct
     1801 aaagttgtcg caccgataca ttgtaattca ccacgtgcaa gcgctggttt taaaatatta
     1861 gacgcatcaa tcgcaccttc tgcaccacct gcaccaatga gcgtatgcat ttcgtcaatg
     1921 aacagaatca cattgcccgc atgatgaatt tcttccataa cttttttcaa acgttcttca
     1981 aattcaccac gatattttgt accagccaca acagtcccca tatctaatga catgacacgt
     2041 ttacctttca acgtttctgg tacttcgttg ttgacaattg cttgcgccaa accttcagca
     2101 atcgctgttt taccaacacc aggttcacca atcaacacag gattattttt tgtgcgacga
     2161 ctcaacactt caatcacacg tgtaatttct gaattacgac ctacaactgg atctaaagta
     2221 ccatctctag caatcactgt taaatcacgc gctaggccat ctaatgtcgg tgtgttattt
     2281 gattttgcag attgtgcatt tttattagac atttctgggc tacctaacgc tttcaccact
     2341 tgtgcacgtg cttttgtaat attgaggtct aggtttgcaa atacacgtgc ggcaacacct
     2401 tcattttcgc ggattaaacc taacaagatg tgttcagtac cgacgaagtt gtgttgtaac
     2461 ttacgtgctt cgtccataga aagttcgatt acttttttgg cacgtggtgt atagtgtaaa
     2521 gcacccattt gctcttgacc atggccaatg agtttttcaa cctcttcgat cactttatct
     2581 tctgtaatgt caaagctttc taatactttt gcagcaatgc cttcaggttc tttcattaac
     2641 ccgagtaata aatgttccgt cccaatattc gaatggttta aacgaattgc ttcttcttgt
     2701 gcatgcgcga gtacacgttg cgcacgttct gttaatcttc caaataacat atgccaacct
     2761 cctatttata tatatgttct taaaatctct gctcgttttg cttcaataga ttgttcatct
     2821 gtctcatcta tcaaaaatgg tgactgtatc gcgaccatta attcattaaa tcgaaaatct
     2881 tccatatcta aaatgcctaa atcgacgccc aacttaatat cacttaaacg gtgggacgct
     2941 tcttccaccg aaattaaacg actatacttc aatataccca aagaacgata tattctatct
     3001 aatgtctcgg tatgattgtg ttcatttaat cgctcacgta aagccagttc ttcgtgaata
     3061 atttgatcaa ctaattctgt taaagcatca ataatctctt gctcactttt tcccaacgtc
     3121 agctgatttg aaacttgata aatatggcca taaacttgtg agccttcacc ataaatccct
     3181 cgaatcgtaa agccaaaacg gttaatcgtc tgcgcaatgc ggttcatccg tttcataatg
     3241 gataaaccag gcaaatgcaa catgacactc gcacgcatcc ctgtaccgac attcgttgga
     3301 cacgttgtta aataaccgag ttgctcgtca taactgattt gtaacgtacg atctaatata
     3361 tcatctatgg cagatgcttt ttgataaagt tcatttaatg acaaatcatt gcccattgct
     3421 tgtatacgaa tatgatcctc ttcattcacc atcacactta ccgactcatc ttcattcaac
     3481 agtactgcag atgccggttg tttcgtcaac tcaggactga ttaagtgttt ggctactagc
     3541 ttatatttac tcaactggtc gagctcatct aagcggagta catttaagtc tgttaataca
     3601 tcttgcacct cattaatgac gcgatgtccc tcagcttcag atggaaacat gagtgggtgc
     3661 acataatttt caaggttacg tgctaaacga atacgcgagg acataatgac cggttgcgca
     3721 ttcacctttt tcatccaatc actcatatgt tggtctaaat tatgcatcat cttgttggga
     3781 cacctcgctt tgttgctcaa gtgcttgaat ctcatcacgc acaatcgccg cttcttcaaa
     3841 ggcttgttgc gcgactaata attcaaggcg tgcacgtttt tcttctagtt gctttttcag
     3901 cgcacgttta tgctgtgatg acttcggaca tttccctgaa tgttcgatat gaccgccttg
     3961 gacacgtctc acaatgtcat acacgtcttc tttaaatgtt tcgtaacatt gcgcgcagcc
     4021 gaatttgccg acatgtgcaa tgtccttcaa cgtcatttga cagttcggac agcgtttttg
     4081 ctctcgataa acaacttgat ccacattcag accatgtttt gctgccaaat gttgcaaaat
     4141 ttgttgaatg acgaatgtgc cttcaacgtc atcaccttca tgccattgtt cgtcagattg
     4201 atcataacct gattgatcgt acgcttgaat aggatgaaat tcaaggtgtt tgttttgctg
     4261 tttatcaagt tcacgcttat cgattttcat tgcacatcac cttctaataa taattaatta
     4321 cgggaagtaa ccgttttaaa atatttgcac ggataatatc tctcgacgcg acatccattt
     4381 ttaatgtttc ccgatccacc accgccgcaa tcatttttgc ttctcggtcc gtaattaatt
     4441 gattttcacg caagccatca ataatataca aagcttgttg ttgagaaagg gccggaccaa
     4501 tcaactccat taaacgttta atgtaattgt tttgatcttt cgtttcaact tttgtgatcc
     4561 gaatataacc accgccgccg cgtttacttt caatttcata accgtgttcg ttagtaaagc
     4621 gcgtcttaat aacataattc aactgagatg gtacacaatc aaaacgttgt gcaatattgg
     4681 cacgttgaat ttcaactaca tcatcttgtg cctcttcaaa taattgctta atgtactgtt
     4741 ctatgatgtc agacatatta tgcatggtat cacccctttt gaccatcttt gactatatta
     4801 tagaacccac tttgaccttt ttcaaccaat ttgattttaa atttgataaa tagttatgtt
     4861 actgcttaca tttttgttgt atgatagtct tagtaaaaat tatttagaaa aaatagaggt
     4921 ggaacacaca tgcatatttt aattggggtc atcgggattg gtgttttctt agccctcgct
     4981 tttattggaa gttctgataa aaagggcata cgttggaaat acattggtat tatgtttgtt
     5041 attcagctca tcttagcata tgctttactg aaaacaaaaa ttgggattac cattgtaggt
     5101 ggtatcgcaa caggattcgg ttacttactc aaacaagccg gtgtcggtat tgattttgtt
     5161 ttcggtggtc ttgtcaataa cggacaaatg tcatttttct taagcgtttt attacctatc
     5221 gttttcattt ctgccttaat tggtatttta caatatacaa aaatattgcc tttaattatt
     5281 aatattttag gtttcttaat ctcaaaaatt aatggcatgg gacgtttaga atcatacaac
     5341 gctgttgctg cagccatcct tggacaatca gaggtattta tttcacttaa aaaacaatta
     5401 ccttacatta cgaagcaacg tttgtataca ttaacagctt cggcgatgtc cactgtgtct
     5461 gcatcgatta ttggtgcgta cttcacatta gtacaaccta aatatgtggt aactgcggtc
     5521 gtccttaact tattaggtgg gtttatcatt gcttccatta ttaaccctta taaagtagat
     5581 gaagaagaag ataagttatt gcttgaagaa gaaaagaaaa agcaatcctt ctttgaaatg
     5641 ttaggggaat acattttaga tggatttaaa gtcgctgtaa tcgtcggcgc gatgttaatc
     5701 ggttatatcg ccctcatctc attattgaat ggacttgttg gtggtctcat tagcctcatt
     5761 tctggcggcg cattagattg gaacttccaa acattaatcg gctttatctt tgcaccactt
     5821 gctttcttaa caggcattcc atggagtgat gcagtagaag ctggctcgat catggcaaca
     5881 aaactattat ctaatgagtt cgtagcgatg actgaactcg gcaaagcatc tggtttatca
     5941 gaacgttcat taggtatcgt gtcggtattc ttagtatcgt ttgctaactt cagctcaatc
     6001 ggtatcatct caggtgctat caaatcatta aatgacgaaa aaggcgacat ggtagcacgt
     6061 ttcggattaa aattattatt cggtgcaaca ctcgtatcat tcgtatccgc agcaatcgca
     6121 ggctttttct tgtaagctgc atctaaagta tgggaaaaga taaacaaata taacacatat
     6181 taagagactg agtcatgatg gctgagtctc ttttttgttg tgcattttca aaccatttta
     6241 gttgggcgac agattcaatt gttaaagaag cattttcatt ttttattatg aacatctcgg
     6301 atttttagtg aaacatttag gcagtattat tttgattgtt aaagaaatgt ccatagtacg
     6361 ctaaaatata gtacaatttt tct
//
LOCUS       DANHPA010000113         6283 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.113, whole genome shotgun sequence.
ACCESSION   DANHPA010000113 DANHPA010000000
VERSION     DANHPA010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 6283)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6283)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6283
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.113"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(312..872)
                     /gene="raiA"
                     /locus_tag="PTC28_002095"
     CDS             complement(312..872)
                     /gene="raiA"
                     /locus_tag="PTC28_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016424517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HDK5717339.1"
                     /translation="MINFEIHGDNLTITDAIRNYIEEKIGKLERYFTNVPNATAHVKV
                     KTYQNSSTKIEVTIPLKNVTLRAEERHDDLYAGIDLINNKLERQVRKYKTRVNRKNRD
                     RGYEEDVFTEVEAAEPEVEQEATASDIEIIRSKTFSLKPMDSEEAVLQMNLLGHDFFV
                     FNDRETDGTSIVYRRKDGKYGLIETE"
     gene            complement(937..1605)
                     /locus_tag="PTC28_002096"
     CDS             complement(937..1605)
                     /locus_tag="PTC28_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HDK5717340.1"
                     /translation="MKHCLFCMNTMHDAILIANLFSKTHALCPKCHELIENCRFNETN
                     RCAYCKGNLDLSGGCRNCQNLTTMGVQFERIEPLFHYDHFVKTLLQQYKFLNDVALAK
                     VFAYYIRVKRVKDELIVPMPSSQDHDLQRTFNPVQTILHHLKLPYIACLKMRPRSKQF
                     ALSRSERYAVDNPIYFDSNISLENKSILLIDDIYTTGHTAHCAGNVLLQQKVRKLSML
                     TFAR"
     gene            complement(1602..2888)
                     /locus_tag="PTC28_002097"
     CDS             complement(1602..2888)
                     /locus_tag="PTC28_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDK5717341.1"
                     /translation="MYFNGQLITDATLYDDNQIIQVEKGVTRTSTGWRCTRCATEERH
                     HFYQYESDVINDTITYCRHCIQMGRMDSVTDVFTLRSVTCRSDAAYQLPFQLSIQQQY
                     ASEHIVQAVLHHESLLLHAVTGAGKTEMMFEAIAQARRQGYNVAVVSPRLDVVIEVST
                     RIKQTFLNEAIDILHQASRQQYAAHFVIATVHQLYRFKRHFHVIFIDEVDAFPLAMDP
                     SLMQTIENAARMEKALIYMTATPPPHLKAQFDDAHTITLPARFHRHPLVTPRFKYFKV
                     RVNKVQFYLLTRMKAQQEQQRTTLIFFSDICEMKRFFKTYAPLVDRLGLVYSEDPERL
                     YKVESLRKGLYDIMLTTTILERGFTMPYLDVWVVDSHRYTSTALIQIAGRVGRKAVCP
                     DGDVLFLHEGRTRAMYDAHRQIVEMNQLAKKRGWIK"
     gene            complement(3045..3929)
                     /gene="fakB1"
                     /locus_tag="PTC28_002098"
     CDS             complement(3045..3929)
                     /gene="fakB1"
                     /locus_tag="PTC28_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid kinase binding subunit FakB1"
                     /protein_id="HDK5717342.1"
                     /translation="MKIAVMTDSTSYIPQYILEKNNIRTVPLSITLENGENYKENISI
                     FADEFHEILRTSKSIPTTSQPAIGEMISAYEAYRDEGYTDVIVIHLSSGISGAYQTAM
                     QASTMVEGIRVHPVDSKIACLPEGSLVLRALDLIEQGLDVEAILADLDDMVQHLGAFL
                     VVDDLKNLHKSGRITGAQAWIGNLLKMKPVLTFEDGLIVPYEKVRTKKRALKLIEDKA
                     VELSNQYEQSTIMVIGGDDRAESQDVYNGLKEKYPNKNIVFSELGPVITSHLGLGGFG
                     IGVVNRHIDVPDSVNVER"
     gene            4227..4862
                     /locus_tag="PTC28_002099"
     CDS             4227..4862
                     /locus_tag="PTC28_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016424513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HDK5717343.1"
                     /translation="MTDSVITIKDEHIIENVISKSRFIAHIKPVHDEDEAKAFIEAKK
                     KEHREATHNCSAYTIGDTMRIQKAHDDGEPTGTAGVPMLEMLKKLDVHDVAVVVTRYF
                     GGIKLGTGGLIRAYGGAVRDVIQDVGRVALRPAIPIRISMAYDLTGKFEYELQSTTFM
                     LRDTAYTDQVTYHIDVLEEEYETFIQFANQHTQGKYTLEADPVMRLPFDID"
     gene            complement(5019..6077)
                     /locus_tag="PTC28_002100"
     CDS             complement(5019..6077)
                     /locus_tag="PTC28_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl/decaprenyl-phosphate
                     alpha-N-acetylglucosaminyl 1-phosphate transferase"
                     /protein_id="HDK5717344.1"
                     /translation="MYTLTLIGVSMIVSLIITPIVIAVSKKLDIVDKPNFRKIHTKPI
                     SMLGGTAILLSFLIGIWLGHPIEREIKPLLLGAIVMYFVGLIDDLYDLKPILKLIGQI
                     AAALVVVSYGVTIDFISIPIGPTIYFGWLSIPITIFWIVAITNAINLIDGLDGLAAGV
                     SVIALVTIAFIAILQGNIFIIMICSVLIGSLFGFLAFNFHPAKIFLGDSGALCIGFII
                     GFVSLLGFKNITFISLFFPIVILAVPFIDTLFAMIRRVKKGQHIMQADKSHLHHKLLE
                     LGYTHRQTVILIYSIAFMFSVVSIILYLSQPWGVFLMIILIVITIELIVEFTGLIDDD
                     YRPLLDLIARQKRLRSKK"
BASE COUNT         1973 a         1274 c         1039 g         1997 t
ORIGIN      
        1 attttattat aatacctcat accgtcatat aacaatgcat gatatttctt tatgatattc
       61 gaatcacctt actactttat agacgttcga catatcaacc aaatcaaaaa cttgtagtca
      121 ggcttttgaa tcaaatacac ataaatattt cctagctgat aaaagaaggg acaagcttta
      181 aatctaatgc atctgattag atttatacac ttgccccacc ctttttgcac gcatcatcac
      241 acgttcaatg aagacttata gttatcaaat tgttccgcgc aatgaacgtc atcttttatt
      301 atgattagag attattcagt ttcaatcaaa ccatatttac catctttacg acgataaaca
      361 atgcttgtac cgtctgtttc acgatcatta aacacgaaga agtcatgtcc taataaattc
      421 atttgtagta cagcttcttc tgagtccatt ggttttaagc tgaacgtttt agaacgaatg
      481 atttcgatat cagacgctgt tgcttcttgt tccacttctg gttcagccgc ctcaacttct
      541 gtaaatacat cctcttcata accacggtct ctgtttttac gattgacacg tgttttatac
      601 ttacgaactt gacgttcaag tttattatta attaaatcga tacctgcata taaatcatcg
      661 tgtcgttcct ctgcacgaag cgttacattt ttcaatggaa ttgtcacttc gattttagta
      721 cttgaatttt gatatgtttt cactttcaca tgcgctgttg catttggcac attagtgaaa
      781 tagcgttcta acttaccaat tttctcctca atataatttc taatagcatc tgtgattgtg
      841 aggttgtctc catgaatttc aaagttaatc atagtgctcg ctcctttcaa cctcttttta
      901 taatatattc cttacttata ttttaacatg tttacgctat ctcgcaaacg ttaacatact
      961 taattttctg actttttgtt gtaataatac atttccagca cagtgggcag tgtgaccggt
     1021 cgtgtaaata tcatcaataa ggagaatact tttgttttcc agagaaatat tactatcgaa
     1081 gtaaatggga ttatcgactg catagcgttc tgaacgtgat aatgcaaatt gtttcgagcg
     1141 aggacgcatt tttaaacatg cgatataagg taatttcaaa tgatgcaata tcgtttgaac
     1201 tggattaaaa gtgcgttgta aatcgtgatc ttgactggat ggcatcggta caatcagttc
     1261 atcttttaca cgttttaccc gaatgtaata tgcaaaaact ttcgcaagtg cgacgtcatt
     1321 taaaaattta tactgctgta acaatgtctt cacaaaatga tcataatgaa aaagtggttc
     1381 aatgcgctca aattgaacac ccatagtggt taggttctga caattgcgac accctcctga
     1441 gagatctaaa ttgcctttac aataggcaca tcgattcgtc tcattaaaac gacaattttc
     1501 gattaattca tggcatttag ggcataaagc atgcgttttc gaaaagaggt tcgctattaa
     1561 aatcgcatca tgcattgtgt tcatacaaaa aagacagtgt ttcatttaat ccatcctcgt
     1621 ttctttgcaa gttgattcat ttcaacaatt tgacgatgag catcatacat cgcccttgtg
     1681 cgcccttcat gcaaaaacaa cacgtcacca tctggacaaa cggctttacg tcctacacgt
     1741 ccagcgattt gtattaaggc tgttgaagta tagcgatgac tatccactac ccatacatct
     1801 aaataaggca tcgtgaaccc tctttccaat atggttgtcg ttaacatgat gtcgtatagg
     1861 ccctttcgta aagattctac cttatataac cgttcagggt cttcactgta aaccaaccct
     1921 aaacggtcca ctaagggcgc atacgtttta aaaaaccgct tcatttcaca tatgtcactg
     1981 aaaaaaatta aagttgtccg ctgctgttct tgctgtgctt tcatacgtgt taataaataa
     2041 aactgcactt tgttcactcg aaccttaaaa tatttaaacc taggggtcac tagaggatgc
     2101 cgatgaaatc ttgccggtaa agtaattgta tgtgcatcat caaattgcgc ttttaaatgc
     2161 ggcggcgggg ttgctgtcat atagatgagt gctttttcca ttcttgctgc attttcaatc
     2221 gtttgcatca aagacgggtc cattgcgagt ggaaaagcat caacttcatc aataaatata
     2281 acatgaaaat gccgcttgaa tcgatacaat tggtgcactg tcgcaatgac aaaatgtgct
     2341 gcatactgct gccgactcgc ttgatgtaaa atatcaatcg cttcatttaa aaatgtttgc
     2401 ttaatacgcg tgctcacttc aatgaccaca tcgagccgtg gtgaaacgac cgcgacatta
     2461 tatccttggc gacgtgcttg agcaatcgct tcaaacatca tttcagtctt acctgcacct
     2521 gtcaccgcat gaagtaataa tgattcatga tgcaacacag cttgaacaat atgctcagaa
     2581 gcatattgct gttgtattga cagctgaaaa ggcaactgat acgccgcgtc cgaacgacaa
     2641 gtaacactcc tcaatgtaaa aacatcagtc acactatcca tccgccccat ttgaatgcaa
     2701 tgacgacaat aggtgattgt gtcatttatt acatcacttt catattgata aaagtgatgc
     2761 cgttcctcag ttgcacatcg cgtacatcgc catccagttg atgtacgtgt cactcccttt
     2821 tctacttgta ttatttgatt gtcatcgtat aaagtcgcgt ctgttataag ttggccatta
     2881 aaatacattt tgaagctcct ttcaataaca tacacgttcc aacgcctcat tttacttttt
     2941 ttatcggaaa aatttttttc tgatccggtc cacttttaat atgatacctc tccaaaataa
     3001 aaacagcccc ctatcttggg agctgcttta aactcatttt attgttaacg ttcaacattg
     3061 accgaatcag gaacatcgat atgacgattg acgacaccga taccaaatcc gcctaatcct
     3121 aaatgtgatg taatgacggg tccaagctct gaaaagacga tatttttatt cggatacttt
     3181 tctttaagac cgttgtaaac gtcttgagac tctgctctat catcgccacc aatgaccata
     3241 atcgtcgact gttcatactg gttcgataat tcaaccgctt tatcttcaat taactttagc
     3301 gctctttttt tcgtacgcac tttttcgtaa ggaacaatca aaccatcttc aaatgttaat
     3361 acaggtttca tttttaataa atttccaatc cacgcttgcg cacctgtaat acggccactt
     3421 ttatgcaagt ttttcaagtc atctacaact aaaaacgccc ctagatgttg taccatatcg
     3481 tctaagtctg ccaatattgc ttcgacatct aatccttgtt caatcaagtc tagagcacgc
     3541 aatacaagtg atccttcagg taaacatgcg attttggaat cgactggatg cacgcgaatc
     3601 ccttcgacca ttgttgaagc ttgcatcgcc gtttgatatg ccccactgat accacttgaa
     3661 agatgtataa caataacatc cgtgtaacct tcatctctat aggcttcgta cgcactaatc
     3721 atttcaccaa tggcaggttg actcgttgtt gggatagact ttgatgttct taatatttca
     3781 tgaaattcgt ctgcaaagat tgaaatattt tctttatagt tttcaccgtt ttctaacgta
     3841 atacttaacg gtacagtacg aatattattc ttttctaata tatattgagg gatatagctt
     3901 gttgaatcag tcatgacagc tattttcatg ttttcttcct cctctaaagc aaacacttaa
     3961 ttttcatcac gcatatgtgc aaaaacattc attatagaca gtgatcattt tgatatgaat
     4021 gtatctcgac agtttattat ataacaaatt tcatcatgga atgctatttt ttcaaatttt
     4081 cttcttcatc gtgacattct ttatattcac atatgttact atcatactat attttgtaaa
     4141 gtcatgtagt atactttcgc atctttaagt taaatctaaa tatagtataa tgagttaagc
     4201 aattactaca ataaagggtg acctgtatga cagattcagt aattacaatt aaagatgaac
     4261 acattataga aaacgtcatt agtaaatctc gtttcattgc tcatattaaa ccggtccatg
     4321 atgaagatga ggcaaaagca tttattgaag cgaagaaaaa agaacatcga gaagcaacgc
     4381 ataactgttc ggcatacacg attggtgata cgatgcgcat tcaaaaagca catgatgatg
     4441 gcgaaccgac tggcacggcg ggtgtgccaa tgttagaaat gttaaaaaag ttagatgtcc
     4501 atgatgtcgc tgtagtggtg acacgctact tcggtggaat taaactcggc acaggtggcc
     4561 tcatacgtgc atatggtggt gctgtacgcg atgtgattca agatgtcggt cgtgtcgcat
     4621 tacgtccggc gattcctatc cgtatttcaa tggcttatga tttaactgga aaatttgaat
     4681 acgaactcca atcaaccact tttatgcttc gtgataccgc atatacagac caagtgacgt
     4741 accatattga tgtccttgaa gaagaatatg agacattcat tcaattcgcc aatcaacata
     4801 cacaaggtaa atatacttta gaagctgacc cagtgatgcg cttaccgttt gatattgatt
     4861 aattttataa ccttgtacaa tatcctctct cgcgtacttt ccatgtggca ttcaaggcag
     4921 caataccgta tgataaaagt atggagcgct agtttcaaca ttgtaaaaac ttatccccca
     4981 tcatgacgat gagggataag taatatatgt ttcaatgttt attttttact tcttaaccgc
     5041 ttttgtctcg ctataaggtc aagtaatgga cgataatcat cgtctattaa accagtgaat
     5101 tcaacaatca attcaatcgt aatgacaatg aggatgatca ttaaaaagac gccccacggt
     5161 tgtgagaggt ataaaataat actcacgaca ctgaacataa acgcgataga atagattaaa
     5221 atcaccgtct gtcgatgcgt ataaccgagt tctaataact tatgatgtaa gtgagattta
     5281 tcggcttgca taatatgttg acctttttta acacggcgaa tcatcgcaaa gagtgtatca
     5341 ataaatggca ctgctaaaat aacgatcggg aaaaacaagg aaataaacgt aatattttta
     5401 aaaccgagta atgacacgaa accgataata aagccgatac ataatgcgcc actatctccc
     5461 aaaaagattt tagctggatg aaagttaaaa gcaagaaatc caaaaagcga accaatcaga
     5521 acactacaaa tcataataat aaaaatattg ccttgtaaaa tcgcaataaa tgcaatcgtc
     5581 acaagcgcaa tgacagagac gcctgctgca agtccatcta agccatcaat caagttaatc
     5641 gcattcgtaa tggctacaat ccaaaaaatg gtaattggaa tacttaacca tccaaagtaa
     5701 atcgttggcc caattggaat ggaaataaaa tcgatagtca cgccgtacga cacaacgact
     5761 aatgccgctg caatttggcc tattaattta agtataggtt ttaagtcata taaatcatct
     5821 attaatccaa caaaatacat aacaattgca ccaagtaata gcggcttgat ttcccgttca
     5881 atcggatgtc caagccaaat ccctattaag aaagataata atattgccgt acccccaagc
     5941 atcgaaatgg gtttagtatg tattttacgg aagttgggtt tatctacaat atctagcttt
     6001 ttagaaacgg ctattactat tggtgtaatt attaaactga ctatcatcga gacgccaatg
     6061 agtgttaaag tatacatcag ttcacctaca ttacacggaa tttttcttca ttcgtcgttc
     6121 aacaacggca aaaatcattc gaaacatttg ctgtcacatt cattcgcaat caaacgactt
     6181 cagcacatta gttaaataca agacaacaca caaaacacaa ttatacatta attatttttt
     6241 attatgtcag tgttgccaat atatttattt tacattaaat taa
//
LOCUS       DANHPA010000114         6221 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.114, whole genome shotgun sequence.
ACCESSION   DANHPA010000114 DANHPA010000000
VERSION     DANHPA010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 6221)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6221)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6221
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.114"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            89..847
                     /locus_tag="PTC28_002101"
     CDS             89..847
                     /locus_tag="PTC28_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HDK5717345.1"
                     /translation="MKKSFLKFSSTFLLLTTIGMTGTNAANVWGAEEGTKVIVEDTKM
                     DTIGKRTAIFEGPKGLPCTSTMLTSNFGITAAHCGNGFQEGSVGTVYPAQSGLSTPFG
                     SMSITLFNPYENKDVAFVYGPDNGKSRDYIYYQKEFASTEITLEGLSDEELYQLVGKK
                     VYSFGYPYNYNGYKQYKFTGEVTYASKDFIKTTLPAYGGQSGSAVFLEENNKLIGILS
                     KGGEDNKDAILEPITKDIARWYKNKKSLIENPVQ"
     gene            complement(991..1548)
                     /gene="pdxT"
                     /locus_tag="PTC28_002102"
     CDS             complement(991..1548)
                     /gene="pdxT"
                     /locus_tag="PTC28_002102"
                     /EC_number="3.5.1.2"
                     /EC_number="4.3.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase glutaminase
                     subunit PdxT"
                     /protein_id="HDK5717346.1"
                     /translation="MKIGVLALQGAVREHIRHIELAGHEGVAIKKVEQLEEIDGLIIP
                     GGESTTLRRLMNLYGFKEALRASQLPMFGTCAGLIVLAKDIVGEEGYLQKLDITVERN
                     SFGRQVDSFESELHIKGIDQPIEGVFIRAPHIQSTEAAVDVLGTIDDKIIAVQQGRYL
                     GVSFHPELTDDYRMTQYFIEHVMQQ"
     gene            complement(1550..2437)
                     /gene="pdxS"
                     /locus_tag="PTC28_002103"
     CDS             complement(1550..2437)
                     /gene="pdxS"
                     /locus_tag="PTC28_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011303857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase lyase subunit
                     PdxS"
                     /protein_id="HDK5717347.1"
                     /translation="MSKQVGSERVKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVM
                     ALERVPSDIRAAGGVARACNPSIVEEVMNAVSIPVMAKCRIGHITEARVLEAMGVDYI
                     DESEVLTPADEVFHLKKDEYTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVE
                     AVRHMRQVNQEVKRITVMSDDELMTEAKNLGAPYEILKDIKKHGRLPVVNFAAGGVAT
                     PQDAALMMELGADGVFVGSGIFKSEDPETFAKAIVQATTHYQDYKLIGELAKKLGTAM
                     KGIDINQLSLEERMQERGW"
     gene            2547..3956
                     /locus_tag="PTC28_002104"
     CDS             2547..3956
                     /locus_tag="PTC28_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HDK5717348.1"
                     /translation="MEMLMFHINKREGQPIYIQLYENIKQSIMNGRMHEGEKLPSKRQ
                     LSQYLSVSQTTVENAYAQLVDEGYIYSQPKSGFFVSDIETLPFTKKTSRPTLPTYQSP
                     TTEQAYAFNLGMIDQAHFPFEQFRKYAKEAFEELQFYLVEPGHKQGDYTLRAQISRYL
                     FHSRGVQSTPEQVIVASSTEQLLSIITDLLPGPKGMMLEDPIYPQVHQLLTRKHIPYQ
                     FVPVENDGIAMNTIENASHHIVYITPSHQFPTGVTMSLKKRMRLLKWASEDPHRYIIE
                     DDYDSEFRYEGKPIPALQSLDQTGSVIYVSTFSKSISPTIRIAYAVLPEALLHHYQQA
                     ENIEGGTVPRHTQFMVTTFMETNQFERHLNRMRKIYRQKRDIILQQLQKYPSIFEVSG
                     EKTGMHLIITIKNGWSEQQCLEQLQRFDIDMKPLSQYVYHQQETAPRFVVGFGGIPIE
                     NLETHIERLITCFKEEYCI"
     gene            complement(4011..5939)
                     /locus_tag="PTC28_002105"
     CDS             complement(4011..5939)
                     /locus_tag="PTC28_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HDK5717349.1"
                     /translation="MLTYFKNVAHIDVDKIDLQRGLRQGLLMFLPLLYGLMFHDFSSA
                     LLATIGTFASIYVFKGTFNSRLRSVTFAAIGLVVTMMIGTLTASTPLLFGIFLLIVAV
                     VPFYVFNTLNIPGPSSTFFIIAYSLASVMPPDPHAFLWRGAIVGIGGLLALIFVLIEI
                     KIGHEQPEFSAVSKEFKEIQALIHHFNEQVTFNALTKTTVQTLISTSEILQTSRSVLK
                     RKSVEVQRLSLLHRTAEGVYSELLELNAKGHRPIPPIINEMMTDVVHRITQRQTSKNV
                     WRKEVNVPTAFEELVGLIFKVDEMIDAPDEQVKKHVTRQSPQYIRRLRYHLTPESMHF
                     ISAAKYSVIIGIAIFVALIFNFERAYWIPLSAHTVLLGGTTIASIERAGARWIGTLIG
                     IGIVIGFLLLEPNSLMVVIVLSLSGAITEILVGANYALAMLAITVQVILLGGLAQGSL
                     TFAIAIPRLLDTTVGVGLAIIGVMIIGRRLASKRLPEFMADVTRIEARIFHTLFSNVH
                     YNVEYFRQREKLRLKINIENMQVMYRYAYGELLSNKKRTQYFYPAMFILEQMSFKLMQ
                     VMEIQKRMLISEETMGQYLVVFENIAKLLEQGQRPEKVVTLPEMNHYAQLRRSLMQLQ
                     EIELYDYQNVRNPHLLKD"
     gene            complement(6027..6141)
                     /gene="rrf"
                     /locus_tag="PTC28_002106"
     rRNA            complement(6027..6141)
                     /gene="rrf"
                     /locus_tag="PTC28_002106"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT         1993 a         1336 c         1074 g         1818 t
ORIGIN      
        1 cttcaacttt atttaaaagg catcatcaat acatacagaa ttaacggatt agtttaatac
       61 aaataaatca tagaaaagga agacaacaat gaaaaaatca tttttaaaat tcagttcaac
      121 atttttactt ttaacaacta tcggcatgac gggcactaac gctgcgaatg tttggggcgc
      181 agaagaagga acgaaggtca ttgtagaaga tacaaaaatg gatacaattg gaaagagaac
      241 ggctattttt gaaggaccaa aaggactccc atgtacatct acaatgctga cttccaattt
      301 tggaatcaca gctgcacatt gtggtaatgg ttttcaagaa ggaagtgtcg gtaccgttta
      361 tcctgctcaa tcaggactat caacaccttt tggatcaatg tctataacac tttttaatcc
      421 atatgaaaac aaagatgtcg cttttgtgta tggtccagac aatggtaaaa gccgtgatta
      481 tatttattat caaaaagaat ttgcaagtac tgagataacg cttgaaggat tatcggatga
      541 agaattatat caattggttg gaaaaaaagt gtattcattt ggttatccat ataattataa
      601 tggttataaa caatataaat ttacgggaga agtcacttat gcgagtaaag attttattaa
      661 aaccacttta ccagcgtatg gtggtcaatc cggttccgca gtatttttag aggaaaacaa
      721 caaattgata ggcatattat ccaaaggagg agaggacaac aaagatgcca ttttagagcc
      781 tatcacgaaa gatatcgctc gatggtacaa aaacaaaaaa agtcttatag aaaaccctgt
      841 tcaataaatc cataatctaa agtgacacct caccatgttt gtatgaaaac gtattggggg
      901 atttacccaa ttctttatac acaccatatc gttttacaac agtaaaggct aggaccattt
      961 cacgaagtcc tagcctattt ttttcctatt ctactgttgc atcacatgct caataaaata
     1021 ttgtgtcatg cgataatcat ctgttaattc tgggtggaac gatacgccta aataacgacc
     1081 ttgttgtaca gcgataattt tgtcatcaat cgtccctaat acatcaacgg ctgcttctgt
     1141 tgattgaata tggggtgcac gaataaaaac accttcaatc ggttgatcaa tacctttaat
     1201 gtgtagttca gactcgaaac tatcgacttg gcgcccaaat gaattacgct ctactgtaat
     1261 atctaacttt tgcagatagc cttcttcgcc tacgatatct ttcgcaagga caattaagcc
     1321 tgcacacgta ccaaacatag gtaattgtga tgcacgtaac gcctctttaa aaccataaag
     1381 attcatgaga cggcgtaaag ttgtcgattc gccaccaggg ataattaagc catcgatttc
     1441 ttctaattgt tcaacttttt taattgcgac accttcatga cccgcaagtt caatatgacg
     1501 gatatgttca cgtaccgcac cttgcaaagc taatacaccg attttcattt taccaaccac
     1561 gctcttgcat acgttcttct aatgaaagtt gattaatatc gatacctttc attgctgtac
     1621 ctagtttttt cgctaactca ccaattaatt tataatcttg gtaatgtgtc gtcgcttgta
     1681 caatcgcttt agcaaatgtt tctgggtctt cagatttaaa aatacctgaa cctacgaata
     1741 caccgtcagc acctaattcc atcattaatg ccgcatcttg aggtgttgcc acgccacctg
     1801 ccgcaaagtt cacgactggt aaacgaccat gctttttaat gtcttttaag atttcatatg
     1861 gcgcgcctaa gtttttcgct tcagtcatca attcgtcatc actcattact gtgatacgtt
     1921 tcacttcttg attcacttgg cgcatatgac gtaccgcttc tacgatattc cctgtacctg
     1981 gttcaccttt cgtacgtaac atcgcagcac cttcaccgat acgacgcgct gcttcaccta
     2041 agttacggca gccacaaacg aatggcactg tatattcatc ttttttcaaa tggaacactt
     2101 catctgcagg tgttaacact tctgactcat caatgtagtc tacacccatt gcttctaata
     2161 ctcttgcttc tgtaatatga ccgatacgac atttcgccat taccggaata gatacagcat
     2221 tcataacttc ttctacaata gatggattac atgcacgcgc aacgccacct gctgcacgaa
     2281 tatctgatgg gactcgttca agtgccatca ctgcaaccgc acctgcttct tccgcaattt
     2341 ttgcttgttc tgcattcacg acgtccataa ttacgccgcc tttttgcatt tctgccattc
     2401 ctcgtttaac acgttctgat ccgacttgtt tagacatagg tgatgaaacc cccttttatt
     2461 atttacacat gtagcttata ctattatctg aaccgcttaa agtgtcagaa acgcaaaata
     2521 ttaaagggtc agattgaggt gcgatgatgg aaatgttgat gtttcatatt aataaacgag
     2581 aagggcagcc gatttatatt caattatacg aaaacattaa acaaagtatt atgaatggac
     2641 gtatgcatga aggcgaaaag ttaccttcta aacgtcaact gagtcaatat ttgtcagtca
     2701 gtcaaacgac cgtggaaaat gcctatgcgc aacttgtcga tgaaggttat atttatagtc
     2761 aaccgaaatc aggctttttc gtcagtgaca tcgaaacatt gccgttcact aaaaagacat
     2821 cacgcccaac attgcctaca tatcaaagcc cgacgactga acaagcttat gcatttaact
     2881 taggaatgat tgatcaagcg cacttccctt tcgaacaatt tcggaaatat gcgaaggaag
     2941 catttgaaga attacagttt tatctcgttg aacctggaca taaacaaggc gattacactt
     3001 tacgtgcaca aattagtcgc tatttatttc atagtcgtgg ggttcaatcc acacccgagc
     3061 aagtcattgt cgcttcgtct acagagcagt tgctgtctat cattacagat ttactgccag
     3121 gacctaaagg aatgatgtta gaggacccga tttaccctca agtccatcag cttttaaccc
     3181 gtaaacatat tccttatcag tttgtgcccg tggaaaacga tggcatcgcg atgaatacga
     3241 ttgaaaatgc gtcacatcat atcgtttaca ttacaccaag tcatcaattt ccaacaggtg
     3301 tgacgatgag cctcaaaaag cggatgcgtc ttctgaaatg ggccagtgaa gacccacatc
     3361 gctatattat tgaagatgat tatgactcag aatttcggta tgaaggtaaa cctattccag
     3421 ccctacaaag tttagatcaa acaggtagcg ttatttatgt gagtacattt tcaaagtcca
     3481 tctctccaac aattcggatt gcttacgccg tgttgccaga agcgttgtta catcattatc
     3541 agcaagccga aaacattgaa ggtggcaccg taccacgcca tacgcaattt atggtgacca
     3601 cctttatgga gacgaatcaa tttgaacgcc atttaaatcg catgagaaaa atttatcgtc
     3661 aaaagcgaga cattatttta caacaactac aaaagtatcc atccattttt gaagtttctg
     3721 gtgaaaaaac aggtatgcat ttaattatta cgattaaaaa tggctggtca gaacaacagt
     3781 gtcttgagca attacaacga tttgatatcg atatgaagcc cctttcccaa tacgtctacc
     3841 atcaacaaga gactgcccct cgttttgtag taggctttgg tgggattcca atagaaaatt
     3901 tagaaacgca tatagaaaga ctcatcactt gttttaaaga agaatattgc atataaaaaa
     3961 agacatgctc gactgaacat ttcattcagc cgagcatgtc ttttttacgt ttaatctttc
     4021 aataagtgtg ggtttctcac attctgataa tcgtacaact caatttcttg caattgcatc
     4081 agtgaacgtc tcagttgtgc gtaatgattc atttcaggta gcgttacaac cttctctgga
     4141 cgctgacctt gctctaataa tttagcgata ttctcaaata caaccaaata ctgccccata
     4201 gtctcttcac taatcaacat gcgcttctgg atctccatca cttgcattaa cttaaagctc
     4261 atttgttcaa gaataaacat cgcaggataa aaatattgcg ttcttttctt gttcgataac
     4321 aactcaccat acgcataacg atacatcact tgcatattct caatattaat tttcagtctc
     4381 agtttttccc tttgacgaaa atattcgaca ttgtaatgta cattcgaaaa taacgtatgg
     4441 aaaattcggg cttcaatgcg tgtcacatct gccataaatt ccggtaaacg tttagaagca
     4501 agtcttctcc caataatcat cacaccaata atcgcaagcc ctacccccac tgttgtatct
     4561 aataaacgtg gaatcgcaat agcaaacgtc aagctccctt gagccaaacc acctaataaa
     4621 atgacttgaa ccgtaattgc caacatcgca agcgcataat tggcaccgac taaaatttca
     4681 gtaatcgcac cacttaaact aagcacaatg accaccatta aactattggg ttctagaagt
     4741 aaaaagccaa tcacaatgcc aataccaata agcgtcccaa tccatcttgc accagcacgt
     4801 tcaatacttg caatcgtcgt accaccaaga agaaccgtat gcgcacttaa cggaatccag
     4861 taagcacgtt caaagttaaa tatcagtgcc acaaaaatgg cgataccgat gatgactgaa
     4921 tatttcgcag ctgaaataaa atgcatcgac tccggtgtta agtgataacg taaccttctt
     4981 atatattgtg gagattgtcg tgtcacatgt tttttaactt gttcatcagg cgcatcaatc
     5041 atttcatcca ccttaaaaat taaacctact agttcttcaa atgcagtagg tacattaact
     5101 tcttttctcc aaacattttt tgacgtttgc ctttgcgtaa tacggtgcac aacgtctgtc
     5161 atcatttcat ttataatagg ggggatggga cgatgacctt ttgcattcaa ttcaagtagt
     5221 tctgaatata ccccttcagc agtacgatgt agcaatgaca accgctgtac ttctacagac
     5281 tttctcttca ataccgatct tgaagtttga agaatttcag aagttgaaat caaggtttgc
     5341 acggtcgttt tggtcaaggc attaaacgtc acttgctcat taaaatggtg aatcaatgct
     5401 tgaatctcct tgaactcttt agacaccgca ctaaattcag gttgctcatg acctatctta
     5461 atttcgatga gcacaaatat aagcgcaaga agaccaccga tacctacaat agcccctctc
     5521 cataaaaatg catgcggatc agggggcata acgcttgcca aactataggc aataataaaa
     5581 aacgtagaag aaggaccagg gatatttaaa gtattaaaaa cataaaacgg cacaacagca
     5641 acaattaaca aaaagatgcc aaaaagcaaa ggcgtacttg cggttaatgt cccgatcatc
     5701 atcgttacaa ctaaaccaat ggctgcgaaa gtgactgaac gcaagcgcga attaaatgtt
     5761 cctttgaaaa cataaatact tgcaaaagtg ccaatcgttg ctaataaggc acttgaaaaa
     5821 tcatgaaaca tcaagccata gagtaaaggt aaaaacatta ataacccttg acgtaaacca
     5881 cgttgtaaat cgattttatc aacatcgata tgtgcgacat ttttgaaata agtcaacatg
     5941 acagacacca cctttgttta aataaaaaaa agagacctac taaagggtct caattcggct
     6001 catcgcatcc tatgcgtttt atttctgctt ggcaacgtcc tactctcgcg gaacgtaagt
     6061 ccgactacca tcggcgctaa agagcttaac ttctgtgttc ggcatgggaa caggtgtgac
     6121 ctctttgcca tagtcaccaa acaaaaatat gattgaatgt tatacattca aaactagata
     6181 gtaagtatat ttatcacaag cattacctta tgaacaatta t
//
LOCUS       DANHPA010000115         6161 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.115, whole genome shotgun sequence.
ACCESSION   DANHPA010000115 DANHPA010000000
VERSION     DANHPA010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 6161)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6161)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6161
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.115"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..149)
                     /locus_tag="PTC28_002107"
     CDS             complement(<1..149)
                     /locus_tag="PTC28_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000613217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP synthase"
                     /protein_id="HDK5717350.1"
                     /translation="MIPTIEEIIDKYGSLVDCLKFDISGEVYEDLLLLRSLSDLNEHQ
                     KMHRVS"
     gene            286..570
                     /locus_tag="PTC28_002108"
     CDS             286..570
                     /locus_tag="PTC28_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000659554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1413 domain-containing protein"
                     /protein_id="HDK5717351.1"
                     /translation="MKEKEFYTLKRAVTSIAFNLPVGTMFMYHDLNVRANVLCSTEIQ
                     QDVGRWFAHFVKYTPNLPFIVVGKKGSSLLYLKTAPNPMNHQNNWKGGNN"
     gene            570..2357
                     /locus_tag="PTC28_002109"
     CDS             570..2357
                     /locus_tag="PTC28_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000181742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF927 domain-containing protein"
                     /protein_id="HDK5717352.1"
                     /translation="MTNIIFSEYPYWLTEDSWYEVIPPKGKNDQQKSIRLSSPILIKN
                     KFLDPKSGVEKLVISNGQNIERIETSDILTSQKLPSLIMYGFSINEKYIKSLSNALQL
                     MRQSLPLSSLYTGVGVLNTDKGVVISLDEPYLSKEITQSQADEIICETQYDLQPKGTF
                     EDWWQMYLDEVKGNLLLELAVVFGISSLVTAFLKTKHEVEFAGTIFSFTGNSSTGKST
                     AAALGVSITGNPTKGSNTLFRSWNGTRNALEGYLSNNYGVPIVLDELSSATFKDTTGL
                     LYSIAEGQGRQRSNIHGEVKSLKNWGTSVISTAEHSIFNNSARNDGLNVRTIEISEAF
                     TTNADNADTIKKATSANYGHIMPLVAEYLLNREQEVIKWFQNEHLRFKTQLEKETSNT
                     GIRMFKRYATITTSARILERVIATPVDLNAVRDYLINYHLDSVSERSLADKAIEVIVQ
                     FVAQNRGKFSDDTRLSTLIENYGMISLEDDHIQVKMIASVFKNMLKEHNFQDTNNVID
                     ALRDKDYIQSDANRKTTKRSVKDKEGKPKTIVFYHLKLDKSYAPIFGLSEKSKFNIPL
                     SFISEHQHPILRDMISKAREWDKNGDIDF"
     gene            2447..2722
                     /locus_tag="PTC28_002110"
     CDS             2447..2722
                     /locus_tag="PTC28_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001791132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717353.1"
                     /translation="MNTVALAHEIEDERFEYLESTPLDTVKECCKQEGRQISNTYTEE
                     YKLINDILEKVIKPTSIVAYGEYEDYIHLKKFAQRRISNSLLLLRCN"
     gene            2915..4261
                     /locus_tag="PTC28_002111"
     CDS             2915..4261
                     /locus_tag="PTC28_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000816499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HDK5717354.1"
                     /translation="MKRAIGYLRQSTTKQQSLPAQKQAIELLAPKHNIQNIQYISDKQ
                     SGRTDNRTGYQQVTERIQQRQCDVLCCYRLNRLHRNLKNALKLMKLCQKYHVHILSVH
                     DGYFDMDKAFDRLKLNIFMSLAELESDNIGEQVKNGLREKAKQGKLITTHAPFGYHYQ
                     NGTFIINNDESPTVKAVFNYYLQGYGYKKIAQYLEDDNKLITRKPYQVRNIIMNPNYC
                     GRVINQYGQYNNMVPPIVSATKYEHAQAIRNKKQLHCIPSENQLKQKIKCPCCDSTLT
                     NMTIRKKHTLRYYICPKNMNESRFVCSFKGINAQKLEVQVLATCQNFFQNQQLYSKIN
                     NAIHQRLKKQRVIEAKSTLTQEQLIDKLAKGMIDAESFRKQTHLMNQKHKTISSISDN
                     QLQTSLQKVIQKSFTLNMLHPYIDEIRITKNKALVGIYFKNEPLNIVNQTSQSSIA"
     gene            4282..5910
                     /locus_tag="PTC28_002112"
     CDS             4282..5910
                     /locus_tag="PTC28_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001186610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HDK5717355.1"
                     /translation="MQQLKQKRVGIYVRVSTEIQSTEGYSIDGQINQIREYCDFNNFV
                     VVDVYADRGISGKSMNRPELQRLLKDANEGQIDSVMVYKTNRLARNTSDLLKIVEDLH
                     RQNVEFFSLSERMEVNTSSGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGN
                     LPLGYDKIPDSKHELMINQHEANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPF
                     SIGSVTYILSNPFYVGKIQFAKYKDWNEKRRKGLNDKPIIAEGKHSPIIIQDLWDKVQ
                     LRKKQVSQKPQVHGKGTNLLTGIVHCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNF
                     RNKGSKVCSANSVRADVIEKYVMDQILEIVKSDKVINQVLERVNQENKVDIGALNHDI
                     AYKQQQYDEVSGKLHNLVKTIEDNPDLTSALKATIHQYETQLNDITNQMNQLKQQQNQ
                     EKLSYDTKQIAALLQRIFQNIESMDKAQLKALYLTVIDRIDIRKDGNHKKQFYVTLKL
                     NNEIIKQLFNNTPLDEVLLSTSSLFLPQTLFLQI"
BASE COUNT         2288 a         1121 c         1020 g         1732 t
ORIGIN      
        1 gaaactctat gcatcttttg gtgttcattt aaatcgctta aacttcttaa taacaataag
       61 tcttcataaa cctcacctga tatatcaaac tttagacaat ctactaaact gccatacttg
      121 tcaataattt cttctatcgt aggtatcata tatacccccc tccctatttt ttgttccgcg
      181 tctaattaaa atgcttcatt tatgcttatt atagcaatca accattgagg tgttaagcat
      241 ctacagtatt gattgactaa taagacttat ttggaggaac ttatgatgaa agaaaaagaa
      301 ttttatacac taaaacgtgc tgttacaagc atcgcattta atttacctgt aggcaccatg
      361 tttatgtatc acgatttgaa tgtgagggct aatgttttgt gctcgactga aattcaacaa
      421 gatgttggtc gttggtttgc acattttgta aaatatacac ctaaccttcc attcattgta
      481 gttggaaaaa aaggttcatc tttgctctac cttaaaactg caccaaatcc gatgaatcat
      541 caaaataact ggaaaggtgg taacaactaa tgactaacat catctttagt gaatatccat
      601 actggcttac tgaagattca tggtatgaag ttataccacc gaaaggtaaa aatgatcagc
      661 aaaagtccat acgcttatct agtccaattt taattaaaaa caagtttctt gaccccaaat
      721 ctggggttga gaaactagtt atttccaacg gacaaaatat tgaacgtatt gaaacatcag
      781 atattttaac atcgcaaaag ttaccttcac taatcatgta tggcttcagc atcaatgaga
      841 agtacattaa atcattaagc aatgcactac aattaatgcg ccaatcactg cctctgtcat
      901 cgttgtatac gggtgtcggt gtgttaaata ctgataaagg tgtcgtcatt tcattagatg
      961 aaccatatct ttcaaaagaa attacacagt cgcaggcgga tgaaatcatt tgtgaaacac
     1021 agtacgatct acaacctaaa ggcacttttg aagactggtg gcaaatgtat cttgatgaag
     1081 taaaaggaaa cttgttactc gaacttgctg tagtgtttgg tatttcttca ttagtaactg
     1141 cgtttttaaa aacaaaacat gaggttgaat tcgcaggtac gattttctca tttacgggaa
     1201 attcaagcac gggtaaatca actgcagcgg ctttaggagt ctcaataacc ggcaacccta
     1261 ctaaaggtag taatacgctg tttagatcat ggaatggcac tagaaacgcg cttgaaggat
     1321 atctaagtaa caactatggt gtacctattg tattggacga actgtcatct gcaaccttta
     1381 aagatacaac tggtttgctc tattcaattg ccgaaggtca aggaagacaa cgttctaata
     1441 tacacggaga agtcaagtca ctaaaaaact ggggaacctc agtaattagt actgccgaac
     1501 acagtatttt caataatagt gcacgtaatg atggtttgaa tgtacgtacc attgaaatat
     1561 ctgaagcttt tacaactaac gctgacaacg cagatactat taaaaaagca acatcagcta
     1621 attatggtca tatcatgcca ttagtagctg aatatctact caatcgtgaa caagaagtca
     1681 ttaaatggtt ccaaaatgag cacctaaggt tcaaaactca actagaaaag gaaaccagca
     1741 atacaggaat tcggatgttc aaacgctatg caaccattac aacatcagca cgtatattgg
     1801 aacgtgtcat tgccacacct gttgatttga atgctgtaag ggactatctt attaactatc
     1861 atttagattc tgttagtgag cgaagcctag ctgataaagc aattgaagtc attgtccaat
     1921 ttgtagcaca aaatcgtggt aagttttctg acgacactag gttatcaacg cttattgaaa
     1981 attatggaat gatttcactt gaagatgatc atatccaggt gaaaatgatt gcctcggttt
     2041 ttaaaaatat gttaaaagaa cataatttcc aagatacaaa taatgtcatt gatgcactga
     2101 gggataaaga ttacatccag tcagacgcca atcgtaaaac aacaaaacgt agtgtcaaag
     2161 acaaagaagg caaaccaaaa accatcgtat tttatcatct taagcttgat aaatcatacg
     2221 ctcctatttt tggtctatct gaaaaaagta aattcaatat acccttatca tttatctctg
     2281 aacaccaaca tccaatacta cgagacatga tttcaaaagc aagagaatgg gataaaaacg
     2341 gtgatattga cttttaaagc ttaaaatatg ttattaaata aatttgctac aacacctatt
     2401 taaaggtgtt gtagcacaaa tattaaatca atggaggaat tgtactatga atacagtagc
     2461 actagctcac gaaattgaag atgaaagatt tgaatactta gaaagcacac ccctagatac
     2521 tgtgaaggaa tgctgtaaac aagaaggtcg tcaaataagt aacacttaca ctgaggagta
     2581 caagttaata aatgacattt tggagaaagt aatcaaacct acgtccattg ttgcatatgg
     2641 agaatatgaa gattacattc atttaaaaaa atttgctcaa agaagaatat cgaattcgtt
     2701 actacttttg agatgcaact aaagaattgt tgttaatact atgaataatg aggtgatata
     2761 catggacgaa ttaatcatac tattagccga tctggttatt gaagaaatca atcacgctga
     2821 tgactaataa taccgcccaa cacccgactg gtgttgggct tatctataat ttcgttcata
     2881 aatatatatt atctctttga aaggaggaaa tactatgaaa cgagccattg gttatttgcg
     2941 ccaaagtaca acgaaacaac aatcactccc agctcaaaag caagcaatag aattattagc
     3001 tccaaagcac aatattcaaa atatccaata cattagtgat aagcaatcag gcagaacaga
     3061 taatcgaaca ggctatcaac aagtcaccga acgcatccaa caaagacaat gtgacgtatt
     3121 atgttgttat cgcttgaatc gacttcatcg caacttgaaa aatgcattaa aactcatgaa
     3181 actctgtcaa aaatatcatg ttcatattct aagtgttcat gatggctatt ttgatatgga
     3241 taaagcgttt gatcgcctaa aactcaatat attcatgagt ctggctgaac ttgaatccga
     3301 taatattgga gaacaagtca aaaatggact tagagaaaag gcaaaacaag gtaaactcat
     3361 aacgacccat gcgcctttcg gttatcacta tcaaaatggt actttcatca ttaataatga
     3421 tgaatcacct accgtcaaag ctgtattcaa ttattatctt caaggatatg gctacaagaa
     3481 gattgcacaa tatttagaag acgataataa acttattacc cgcaagcctt atcaggtacg
     3541 aaatataatt atgaacccaa attattgtgg tcgtgtcatc aatcaatatg gtcaatataa
     3601 caatatggta ccacctattg tttcggcaac gaaatatgaa catgctcaag caatccgtaa
     3661 taagaagcaa cttcactgta taccttcaga gaatcagctg aaacaaaaga tcaaatgtcc
     3721 ttgttgtgac tcaacactga caaatatgac aataagaaaa aaacatacat tgcgatatta
     3781 tatttgtcct aaaaatatga atgaatctcg ctttgtctgt tcattcaaag gaataaatgc
     3841 acaaaaatta gaagttcaag tcttagctac atgtcagaac ttctttcaaa accaacagct
     3901 ctattcaaaa attaataatg caattcatca acgcctcaaa aaacaaagag tgatagaagc
     3961 taaaagtacg ctaactcaag aacaactgat agataaactt gccaaaggta tgattgatgc
     4021 tgaatcattc agaaaacaga ctcatttgat gaatcaaaag cacaaaacca tatcctccat
     4081 aagtgataat cagttacaaa catcactaca aaaggttata cagaaaagtt tcacgttaaa
     4141 catgctgcat ccctatattg atgaaattcg cattacaaaa aataaagccc ttgttgggat
     4201 ctatttcaaa aatgaaccat tgaacattgt gaaccaaacc tcgcaatcat cgattgctta
     4261 atcagaaagg atgaaaaaat catgcaacaa ctcaaacaaa aacgtgtcgg tatctatgtt
     4321 cgtgtatcaa cggaaatcca aagtactgaa ggctatagta tcgatggaca aatcaatcaa
     4381 attcgagaat attgtgattt caataacttt gttgttgtag atgtatacgc ggatagaggt
     4441 atctctggaa aatctatgaa ccgaccagaa ctacaacgtt tgttaaaaga tgcgaacgaa
     4501 ggtcagattg attctgttat ggtctacaaa acaaaccgac tagcacgtaa cacttctgac
     4561 ttactcaaaa ttgttgaaga ccttcatcgt caaaatgtcg aattcttcag cttatctgag
     4621 cgtatggaag tcaatacaag cagtggtaaa ttgatgctac aaattctagc gagtttttca
     4681 gaatttgaaa gaaataatat tgtcgaaaat gtattcatgg gtcaaacccg acgcgctcaa
     4741 gaaggctatt atcaaggcaa tttgccgctg ggctatgaca aaataccgga tagcaagcat
     4801 gaactcatga taaaccaaca tgaagcgaat attgtcaaat atatatttga gtcatatgct
     4861 aaaggccacg gatatcgtaa aattgcgaat gcactcaatc acaaaggata cgtgactaaa
     4921 aaaggaaagc ctttcagtat tggttcagtg acctatatct tatctaatcc attctatgtt
     4981 ggtaaaattc aattcgcaaa gtacaaagat tggaatgaaa agcgtcgtaa agggctgaat
     5041 gataaaccaa taatagctga aggtaagcat tcccctatta ttattcaaga cttatgggat
     5101 aaagtccaat tacgtaaaaa acaagtcagt caaaaacctc aagtccacgg taaaggaact
     5161 aatctattaa caggtatcgt tcattgtcca caatgtggtg caccaatggc agctagtaac
     5221 acaacgaaca cattgaaaga tggtaccaag aagcgaatac gttattattc ttgcagtaac
     5281 ttccgaaaca aaggctcaaa agtatgttct gcgaatagcg ttagagctga tgtgattgag
     5341 aaatacgtca tggatcaaat actcgaaatt gtcaaaagtg ataaagtcat taaccaagtc
     5401 ttagaacgtg tcaatcaaga aaataaagtc gatattggtg cattgaacca cgatatcgct
     5461 tataaacaac aacaatacga tgaagtcagc gggaaactcc ataatttagt taaaaccatt
     5521 gaagataatc cggacctaac atctgcattg aaagcaacta ttcatcaata tgaaacacaa
     5581 ctcaatgaca ttacaaatca aatgaatcaa ctcaaacagc aacaaaatca agagaaacta
     5641 tcttatgata cgaaacaaat cgctgcccta ttacaacgaa tatttcaaaa tatagaatca
     5701 atggataaag cacaactcaa agcattatat cttacagtca ttgaccgtat tgatattcgt
     5761 aaagacggta atcataaaaa acagttctac gttacactaa aactcaataa tgaaattatt
     5821 aaacaacttt tcaataatac ccctctcgac gaagtgctcc tcagcacttc gtctttattt
     5881 ttgcctcaaa cgctctttct tcaaatctaa tatctatgta ctgtcctttc gtcattcaat
     5941 aacacccatc taacgaatct tttcaacata ctaacaagtc acaactcaat gtgaagctta
     6001 tattgtatga cgaaagaaca tcccaaaata aaatatgaac gggatagcaa tgggatttga
     6061 taaatacatg taggataagg attacgcaag cgtaatcccg aaatcccatt attatttata
     6121 aataaataat ataaaaagaa aaagtaagtc gtactgacac c
//
LOCUS       DANHPA010000116         6027 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.116, whole genome shotgun sequence.
ACCESSION   DANHPA010000116 DANHPA010000000
VERSION     DANHPA010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 6027)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6027)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6027
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.116"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            151..4314
                     /locus_tag="PTC28_002113"
     CDS             151..4314
                     /locus_tag="PTC28_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3-like domain-containing protein"
                     /protein_id="HDK5717356.1"
                     /translation="MVKKFGYKTPTIVALTLAGTAFSAHQANAAEQVAPEKTPTNVLD
                     DQYALKQADDAKQTTQGTTLAGSKEYKDPSQIDTTQVDTAAQAETPVEEGQQDAQQPA
                     TTDEATSTDHTVSKGTNESASPATASIDEGTLNAQANSDETATNRTQDVTENVTKYPY
                     HSSEIDTHEDATVSPDTYHAPDTHTQQPSTMDVSDSTSAQTEATQANTSTNVNDKEAV
                     LTIEDAPTTQHQVAVQSEANKEAKATTETAQNKTPQVEKKATATQNTAQLATGYQDIT
                     DKVSKRVAVTNETKADATTAKTQAPATQHQADTQKKTITDKKATTYSAQTATDQDINA
                     NPDGPTPPRVGGKGGPPASLSLQSTGQTAFRSAVASKPRAYQPKVKSSINDYIRKQNY
                     KVPVYEEDYSSYFPKYGYRNGVGKPEGIIVHDTANDNSTIDGEISYMKRNYQNAFVHG
                     FINGQRIVETQPTDYLAWGAGAIANERFIHIELVHVHSKEDFARQMNNMADYAATNLQ
                     YYGLSPDSAEYDGRGTVWTHDAVSRFLGGTDHTDPHGYLKQHGYSFDALYDLINEKYQ
                     VKMGYASPANSSSKPSTNTGLTVKNTTGFGRINTTNSGLYTTVYDQKGKATNQTNQTL
                     KVTKEATLNGNKFYLMSDAKSNQTLGWVKSNDATYQAAQAEKKVTKTYTVKPGTTVYQ
                     VPWGASSQTVGKAPGTSNQSFKSTKEQTVAKTKWLYGTVGKVTGWINARSVVANDQKP
                     STNTALKVTTDTGLGRIKDKNSGLYATVYDKTGKSTSATNQTLKVTKKASVNGQSFYL
                     VSDYAKGTNVGWVKQSDVEYQTSKAPSKVNQNYTIKSGAKLYQVPWGTSKQVAGTVTG
                     AATQTFKATQSQTVGKATYLYGTVGKLSGWINSTALAAQKTTTNVTKTISQIGQLNTK
                     NSGVKASIYDKTAKDASKWAGQTYKITKTASANNEDYVLLQNSTGGTPLGWFNVKDVT
                     TRNLGAETAVKGRYTVNSKTSGLYAMPWGTTKQRVDTLKNATSRLFTASKSVKVGNDT
                     FLFGTVNQKLGWINQKDLTAVAAKVANMKTASNSAVKGAAITTLKKVEDYVITNKNGY
                     YYTKVGDSKTAGALKGFYQQIFKVEKTSLLNGITWYYGAFQNGTKGWIKAADIRSSFI
                     QHTAVSSTLKAALDKQMALTYPPQVQRVAGKWVNANRAETEKAMNTAAIEKDPTLIYQ
                     FLKLDKYQGLGVEELNKLLRGKGILEGQGAAFKEAAQKHNINEVYLMSHAFLETGNGT
                     SQLANGGHVDKNNKVVTNGKPKYYNMFGIGAIDTDALRNGFKTAEKYGWNTVSKAIIG
                     GAKFIRDQYIGSGQNTLYRMRWNPEHPATHQYATDINWANVNAQRMKYFYDQIGETGK
                     YFDVDVYKK"
     gene            complement(4745..>6027)
                     /locus_tag="PTC28_002114"
     CDS             complement(4745..>6027)
                     /locus_tag="PTC28_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HDK5717357.1"
                     /translation="KRWIVLAFFIISIASAVLMFYMTTPDTNHARTYFGTDTRLQTLL
                     LGVIFAFIWPAFRLKEHPPKFAANIIDSLGLIALFALLTLFFFVNEQQIILYSGGFYC
                     ISLLTLILIASLVLPNGRLAKVMSNPVFLYIGKRSYSLYLWHYVIVTFVHQYFVAGQY
                     PYYIYIIDIALTFLMAEISYQFIETPFRRYGFKTFYSKDKVWLTVIRTPVVVAIIVIA
                     ALVLSGQFDYLAKQEKKASSYQTNHKNNGKDNEKPIENPAEKEQKAEKFDPKKQSPLF
                     IGDSLTVGMGYYLDEHYQKPTIDAQVGRSMGAAIQVARNYTSFNQKGQPVVIQIGTNG
                     DFDQDQLETLIKDFDKADVYLINTTVPRDYKDHVNQLLKKAADKHKHVTLVDWNKVGV
                     GHTEYFAYDGIHLEHPGIQKLVSELDKEMKANQS"
BASE COUNT         2166 a         1208 c         1100 g         1553 t
ORIGIN      
        1 tttctcctaa ttaaaaacaa cgcaaaaata taaatacgga gaacgattat taaaattaaa
       61 ttacaatcca gttaaaatac acaaatcgcc tcccaataac tctataatgt gaataatcaa
      121 ctttttattt tatctaaaag gagcaataaa atggtcaaaa aatttggtta taaaacacct
      181 acaatcgttg cacttactct ggctggaact gcattttctg cacaccaagc caatgccgct
      241 gaacaagttg cacctgaaaa aacacctacg aatgtacttg atgatcaata cgcattaaaa
      301 caagctgatg atgcaaaaca aacgacacaa ggaacaacac ttgcaggttc aaaagaatac
      361 aaggaccctt cacaaattga tacgactcaa gtcgatacag cagcacaagc tgaaacaccc
      421 gtagaagaag gacaacaaga cgcacaacaa cctgctacaa ctgatgaagc gacatcaaca
      481 gatcatactg tatcaaaagg tacaaacgaa agtgcatcac ctgcaacagc ttctatagat
      541 gaaggaacat taaacgcaca agccaattca gatgaaacgg ctactaaccg tacacaagac
      601 gtcactgaaa atgtgacaaa atatccttat cattcaagtg aaatcgatac acatgaagac
      661 gcaactgtgt caccagatac atatcatgca ccagacacgc atacgcaaca accttcaaca
      721 atggatgtaa gcgattcaac atcagcacaa actgaagcga cgcaagcaaa tacgtcaaca
      781 aatgtaaatg acaaagaggc cgttttgaca atagaagatg cacctactac acaacatcaa
      841 gtagctgtac aatctgaagc caacaaagaa gcgaaggcaa ctactgaaac agctcaaaat
      901 aaaacacctc aagttgaaaa gaaagcaaca gcaactcaaa atacagcaca gttagcaacg
      961 gggtatcagg atattactga caaagtctca aaacgcgtag cagtgacaaa tgaaacgaaa
     1021 gcggatgcca caacagcgaa aacacaagca cctgctacac aacatcaagc tgatacacaa
     1081 aagaaaacga taacagacaa gaaggcaaca acatacagtg cacaaacagc aactgaccaa
     1141 gacataaatg cgaatccgga cggtccaaca cctccacgcg ttggcggtaa agggggacct
     1201 cctgcttcac tttcacttca atcgactggt caaacagcat tccgttcagc tgtcgctagt
     1261 aaaccgcgtg catatcaacc taaagtgaaa tcgtctatta atgactatat tcgtaagcaa
     1321 aactacaaag tgcctgtata cgaagaagat tattcaagtt acttccctaa atacggttat
     1381 cgtaatggtg tcggtaaacc tgagggcatc atcgtgcatg atacagcaaa tgataactct
     1441 acaattgatg gcgaaatcag ttacatgaaa agaaattatc aaaacgcttt cgtacatggc
     1501 tttattaatg gtcaacgtat tgttgaaacg caacctacag attatttagc atggggtgca
     1561 ggtgcgattg cgaatgaacg ctttattcat atcgaactcg ttcatgttca cagtaaagaa
     1621 gatttcgcac gtcaaatgaa caatatggca gattatgcgg cgacgaactt acaatattat
     1681 ggcctttctc cagatagtgc ggaatatgat ggtcgtggga cagtttggac acatgatgct
     1741 gtttctagat ttttaggtgg tacagaccat accgatccgc acggctattt aaaacaacat
     1801 ggttattcct ttgatgcgtt gtatgattta atcaatgaaa aatatcaagt gaaaatgggt
     1861 tatgcctcac ctgctaactc gtcttcaaaa ccatcaacaa atactggctt aacagttaaa
     1921 aacacaacag gtttcggccg tattaacaca acaaatagcg gtttatatac gaccgtttat
     1981 gatcaaaaag gtaaagcgac gaatcaaacg aatcaaacgt taaaagttac aaaagaagcg
     2041 acgttaaatg gcaacaaatt ctatttaatg agtgatgcaa aatctaatca aacactcggt
     2101 tgggtcaaat caaacgacgc aacatatcaa gctgcccaag ctgagaaaaa agtaacgaaa
     2161 acgtatactg tcaaaccagg aacaacagta tatcaagtgc cttggggtgc ctcatctcaa
     2221 acagtaggca aagctccagg tacgtcaaac caatcattca aatcaacgaa agaacaaact
     2281 gttgcgaaaa cgaaatggct ttatgggaca gttggcaaag tgacaggctg gattaatgca
     2341 aggagtgttg tagcaaatga ccaaaaacca tcgacgaata ccgcactaaa agtaacaact
     2401 gacactggtc tcggtcgcat taaagacaaa aatagtggtt tatatgcaac ggtatatgat
     2461 aaaactggta aaagcacttc agccactaac caaacattaa aagtaacgaa aaaagcaagt
     2521 gtcaatggcc aatcattcta tttagtatca gattatgcta aaggtacaaa cgttggttgg
     2581 gtgaaacagt cagatgtcga atatcaaaca agtaaagccc cttctaaagt gaatcaaaat
     2641 tatacgatta aatcgggtgc gaaattgtat caagtgcctt ggggtacaag taaacaagtt
     2701 gccggtacag tgacaggtgc tgcgacacaa acatttaagg caacacaatc tcaaactgta
     2761 ggtaaagcaa catacttgta tgggacagtt ggcaaattat ctggttggat taattcaaca
     2821 gcattagcag ctcaaaaaac aacaacgaat gttactaaaa caatttctca aatcggtcaa
     2881 ctgaacacga aaaatagcgg tgtcaaagct tctatttatg acaaaacagc aaaagatgca
     2941 tccaaatggg caggtcaaac ttataaaatt actaaaacag cttctgccaa taacgaagac
     3001 tatgtattac tgcaaaatag tacaggaggc acgccactcg gttggttcaa tgttaaagac
     3061 gtcacaacac gcaacttagg tgctgaaaca gctgttaaag gtcggtacac tgttaatagt
     3121 aaaacatctg gcctctacgc tatgccttgg ggtacaacga agcaacgtgt cgatacatta
     3181 aaaaatgcca caagtcgttt atttacagct tcaaaatcag ttaaagtcgg taatgataca
     3241 ttcttattcg gtacagtgaa tcaaaaattg ggctggatta atcaaaaaga cttaacagcc
     3301 gtagcagcaa aagttgcaaa catgaaaact gcatcgaata gcgcagtcaa aggtgccgca
     3361 atcacaactt tgaaaaaagt agaagattat gtgattacga ataaaaatgg ttattattac
     3421 actaaagttg gagattcaaa aacagctggt gctttaaaag gtttttatca acaaattttt
     3481 aaagtcgaaa aaacatcttt actgaacggc attacttggt actatggcgc attccaaaac
     3541 gggacgaaag gatggattaa agcagctgac atacgttcat cattcattca acatactgcg
     3601 gtcagtagca cattgaaagc agcactcgat aaacaaatgg cgctgactta cccgcctcaa
     3661 gttcaacgtg tagccggtaa atgggtcaat gcgaatcgtg cagaaactga aaaagcaatg
     3721 aataccgcag caattgaaaa agatccgact ctcatttacc aatttttaaa acttgataaa
     3781 taccaaggtc ttggcgtaga agaacttaat aaattgttaa gaggcaaagg cattttagaa
     3841 ggtcaaggtg ccgcatttaa agaagccgca caaaaacaca atattaatga ggtttactta
     3901 atgtctcacg catttttaga aacaggtaac gggacttctc aattagccaa tggcggtcac
     3961 gtagataaaa ataataaagt cgtaacaaac ggtaaaccga agtattacaa catgttcggt
     4021 atcggggcaa ttgatacaga cgctttacgc aatggcttta aaactgctga aaaatatggt
     4081 tggaatacgg tcagcaaagc gattatcggt ggcgcaaaat tcatccgtga tcagtacatc
     4141 ggttcaggac aaaacacatt gtatcgtatg cgttggaatc cagaacaccc tgccacacat
     4201 cagtatgcga ctgatattaa ttgggcaaat gtaaacgcac aacgcatgaa atatttctat
     4261 gatcaaattg gtgaaacagg taaatatttc gacgtcgatg tatataagaa gtagatacag
     4321 tagaaagcag ctctagtcat ctttatggtg attagagctt ttttattgat atcttaaggt
     4381 agtttgcaat tggcttgatg ttaaaacatg tcactaggac tcactacagc gcacctgatc
     4441 acccgcgctt tactgatgtg cccaactgat aacactcatc cttaaatgcc tatttcacac
     4501 cacatgttca cacctcccta caaaataaaa actttacata aaattgcgtt gagacaagtc
     4561 ccatgggaac gcgagtcctt aactatcaat catccagaca aatcatacaa atagaaatca
     4621 ttttataatc ttgttgtaca actatactta aattaaagaa atgttatata aacatgcaaa
     4681 aagcggtcaa tagcattcac catcaaccgc ttcttctcta ttttgcttct gctttatttt
     4741 tagactaact ctgattcgcc ttcatctctt tatccaactc tgacacgagc ttttgaattc
     4801 ctggatgttc taaatgtatg ccatcatacg caaaatattc cgtatgaccg acaccgactt
     4861 tattccaatc tactaacgtc acatgcttat gtttatctgc cgccttttta agcaattggt
     4921 tcacgtgatc tttataatca cgtggcactg tcgtattgat taaataaaca tcggctttat
     4981 caaaatcttt gatgagtgtt tctaattggt cttggtcaaa atcaccattc gtaccaattt
     5041 gaatgacgac cggctgccct ttttgattaa atgacgtata gtttctcgca acctgtatcg
     5101 ctgcgcccat tgaacgaccg acttgtgcat caatagtagg cttttggtaa tgctcatcca
     5161 gataataacc catacctact gttaaagagt caccaataaa gagcggtgat tgctttttag
     5221 gatcgaactt ttctgctttt tgttcctttt cagctggatt ttctattggt ttttcattgt
     5281 ctttaccatt atttttgtga ttcgtttgat aactgctcgc ctttttctct tgtttagcaa
     5341 ggtaatcaaa ttgaccactg agcactaatg ctgctatgac gataatagcc acaacaacgg
     5401 gtgtacgaat caccgttaac caaaccttat cttttgaata gaatgttttg aaaccatagc
     5461 gtctaaatgg cgtttcaatg aattgatatg atatttcggc cattaaaaat gttaacgcaa
     5521 tatcaatgat ataaatataa tatggatatt gacctgccac aaagtattga tgtacaaaag
     5581 tcacaatgac gtaatgccat aaatataaac tgtatgacct tttaccgata tacaaaaata
     5641 cagggttact catcacttta gctaatcgcc cattcggaag tacaaggctt gcaatgagta
     5701 tcaatgtgag taatgaaata cagtaaaatc caccgctata aaggatgatt tgctgttcgt
     5761 ttacaaaaaa gaataatgta agtaaagcga ataatgcgat aagacctaga ctatcgatga
     5821 tgttagccgc aaatttaggc ggatgttctt tcaatcgaaa agctggccat ataaatgcaa
     5881 aaatgacacc taataataat gtttgtaaac gggtgtctgt cccaaaatat gtacgtgcat
     5941 ggttcgtatc gggtgttgtc atataaaaca ttaatactgc cgacgcaata gaaataatga
     6001 aaaatgcgag tacaatccat ctttttc
//
LOCUS       DANHPA010000117         5861 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.117, whole genome shotgun sequence.
ACCESSION   DANHPA010000117 DANHPA010000000
VERSION     DANHPA010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5861)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5861)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5861
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.117"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(319..1932)
                     /locus_tag="PTC28_002115"
     CDS             complement(319..1932)
                     /locus_tag="PTC28_002115"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HDK5717358.1"
                     /translation="MTKFIFVTGGVVSSLGKGITAASLGRLLKDRGLKVTIQKFDPYL
                     NVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDINLNQYSNVTAGKVYSHVLQKE
                     RRGDYLGGTVQVIPHITNEIKSRLLLAGESTNADVVITEIGGTTGDIESLPFIEAIRQ
                     IKSDLGRDNVMYVHCTLLPYIKAAGEMKTKPTQHSVKELRGLGIQPDLIVVRTEYEMT
                     QDLKDKIALFCDIDKESVIECRDAESLYEIPLQLSHQNMDDIVIERLGLQVDRDTQLD
                     EWNHLLRVVNNLEGKVTIGLVGKYVSLQDAYLSVAESLKHAGYQFMKDIEIRWIDSSE
                     VNDDNAAEYLSDVDGILVPGGFGFRASEGKISAIKYAREQQIPFFGICLGMQLATVEY
                     ARHVVGLEGAHSAELDPNTPYPVIDLLPEQKDIEDLGGTLRLGLYPCTIQEGTLAEKI
                     YGKTEVEERHRHRYEFNNEYREQLEAAGMIFSGTSPDGRLVEMVELKEHPFFIACQFH
                     PEFLSRPNRPQPIFKSFIEAALLQQNKTK"
     gene            complement(2343..2885)
                     /locus_tag="PTC28_002116"
     CDS             complement(2343..2885)
                     /locus_tag="PTC28_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit delta"
                     /protein_id="HDK5717359.1"
                     /translation="MKLQDYTQEMVDEKSFIDMAYTLLSEQNATMNLYDIIDEFKRIG
                     HYEDAQIEDRIVQFYTDLNTDGRFLSVGDNVWGLRDWYSVDDIEEKIAPTIQKFDILD
                     EDDEEDKNLTLLGEDDLDGDDNIPNRTDDQEDLDDPEDERVEDEIEESDLVVEEDEED
                     INETYDEDDELEEEEEEETF"
     gene            complement(3154..4017)
                     /locus_tag="PTC28_002117"
     CDS             complement(3154..4017)
                     /locus_tag="PTC28_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDK5717360.1"
                     /translation="MTTKIKRFDDITIQLYDKQYRDALYQFELNERQRIYSSLPKEVL
                     DDALNDDNRVANIVLNDQDEVIGFFVLHEHYQHEGYDTPYEVVYIRSLSINEAYQGNG
                     YGTKIMMTLPEYVQMIFPDFNHLYLVVDAENESAWNVYERAGFMHTATKEEGPIGKER
                     LYYLDLDHKYVSSLKLIKSEGSKAGPIEIVNFILDGEKVGFLAIEAFNERLIIRALYV
                     DDAHRDTGIAQNALRQLATYVRKENHDTKVIEVTLFGPNHQLTPLFVKSNFVETLTTD
                     DYVTLEKYINY"
     gene            4188..5780
                     /locus_tag="PTC28_002118"
     CDS             4188..5780
                     /locus_tag="PTC28_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HDK5717361.1"
                     /translation="MNKHNNLKKKNRNIVYTISFSIILILTLLAAIFPKTFGAYAQNT
                     YDALALNFGWLFLIIVFVLDIFLIFLALSRYGRFKLGRDDEEPEFSFMSWIGMLFSAG
                     LGVGIVFWGVAEPLTHYLHSPFPKSVDGQSVESARLAMGYTFFHWGISQWSIFAMSGL
                     IVAYFQFRKNRDGLISTAMEPVFGETYRRPFRNVIDILAIIATVMGIATSIGLGILQI
                     AGGLNHVFKVPNTSLTLILITLLMTLIFLGSALTGINRGVKWLSNINIMIGALLLLFI
                     FIFGDLRFIVETFTVSIGDYLTHFIQYSLRMDPYTGDNSWIQKWTVFYWAWVISWSPF
                     IGGFVARVSRGRTIREFVVGVLIIPPCISFLWISGFGGTAINWALHHQDGIEKIVDQD
                     YTVALFELLSKFPLYELTSALAIILIFTFIVTSADSTTHIVSGMATGGVENPKRKHKM
                     VWGILIGAISVALTVAGGLTSLQTASVVTGLPFSIILLLMIFSLMNALRREHTKHFKM
                     THIDDEKDFSRTIEERERDNEM"
BASE COUNT         1632 a         1157 c         1029 g         2043 t
ORIGIN      
        1 tacttcacgt taacttgatg cactttaaag cataggcgtt atttcatcat taagctacaa
       61 attgcttgcc atgagtgcta cttatttcac gacttgttcg actgccattt tttaaatttc
      121 accttaaata ttatcgtcat tttaaatgta gcagaagata gcgagaatgt taatgtagcc
      181 tgtcattttc aggagaaatc attcgtttta ttttctaatg taccgctcat catttaaggg
      241 gcggttttaa caatgatttt tcacctataa aatcaaaaaa acagccctat gaaaagttcc
      301 ataggactgc aatgtttatt atttcgtttt attttgttgt aacaatgccg cttcaatgaa
      361 tgatttgaag atcggttgcg ggcggttcgg tcttgataaa aactctgggt ggaattggca
      421 tgcgataaag aatggatgtt cttttaactc caccatttca actaaacgac cgtctgggct
      481 tgtacctgag aagatcatac ctgctgcttc aagttgttct ctatattcat tgttgaactc
      541 atagcgatga cgatgacgtt cttccacttc tgtttttccg taaatttttt cagctaatgt
      601 gccttcttga attgtacatg ggtataaacc taaacgtaat gtaccgccta agtcttcgat
      661 atctttttgt tctggtaata aatcgatcac tgggtatggt gtattcggat ctaattcagc
      721 tgaatgcgca ccttctaaac caacgacgtg acgtgcatat tccactgtcg caagttgcat
      781 ccctaaacaa ataccgaaga acggaatctg ttgttcacgt gcatatttaa tcgctgaaat
      841 tttaccttca cttgcacgga aaccgaaacc acctggaaca aggatgccgt cgacatctga
      901 taaatattct gcagcgttgt catcattaac ctcacttgaa tcaatccaac gaatttcgat
      961 atctttcata aattggtaac ccgcatgttt aagtgactca gccactgaca agtacgcatc
     1021 ttgaagtgac acatatttac cgacaagacc aattgtcact ttaccttcta agttattcac
     1081 gacacgtaat aaatgattcc attcatcgag ttgtgtatcg cgatccactt gaagtcctaa
     1141 acgttcgatg acaatatcgt ccatgttttg atggcttaat tgtaacggaa tttcataaag
     1201 tgattctgca tcacgacatt cgatgacgct ttctttatca atgtcacaga ataatgcaat
     1261 tttgtctttt aagtcttgcg tcatttcata ttctgtacgc acaacgatta aatcaggttg
     1321 aatccctaaa ccacgtaatt ctttcacact atgttgtgtc ggtttcgttt tcatttcacc
     1381 tgctgcttta atgtacggta ataaagtaca gtgtacatac atcacgttgt cgcggcctaa
     1441 gtcactctta atttggcgaa tcgcttcaat aaatggtaac gattcgatat cacctgttgt
     1501 cccaccgatt tcagtaatga caacatctgc atttgtactt tcaccagcga gtaacaaacg
     1561 tgacttaatt tcgtttgtaa tatgtggaat gacttggact gtcccaccta agtagtcacc
     1621 acgacgctct ttttgtagca cgtgtgagta cactttccca gctgttacgt tagagtattg
     1681 gtttaagtta atgtcgataa aacgttcata atgacctaag tccaagtccg tttcagcacc
     1741 atcatctgtc acgaaaactt ccccgtgttg atatggactc attgtacctg gatccacatt
     1801 taaataagga tcaaattttt ggatcgtcac ctttaatcct ctatccttta ataagcgtcc
     1861 tagtgaagcg gctgtaatcc ctttacctaa tgatgaaacc acgccaccag ttacgaaaat
     1921 aaatttagtc ataattcaat ttcctcctcg tttgttgtct gaagtacctt tcaaaatgta
     1981 ggggtgaatt tgtatgccaa tcattgatta tgtgcaagac tgtattctca atttcaaaaa
     2041 gttgtcgtcg ttgcagtgcg atgaagattg tatggccaac acttcgcatt aatgaacata
     2101 cggccacttt tatcgtctta gaatcactta acgtccgcaa tgtttcataa aattaaaaaa
     2161 agttcccact cacaatatca tgattgtaag gggaacctta acgatagatg agactcgtca
     2221 tttcggagcc atcactactt tctatcgttt tcatttattt atccgtccta attaaaggag
     2281 cccgaataaa attctatcat gttgtcgtaa aaagtcaaca aactttattt agaaatcaga
     2341 aattaaaatg tttcttcttc ttcctcttct tcaagttcat cgtcttcatc gtatgtttca
     2401 ttgatgtctt cttcgtcttc ttcaactacg aggtctgact cttcaatttc atcttcaaca
     2461 cgttcatctt caggatcatc taaatcttct tgatcatcag tacgatttgg aatgttgtca
     2521 tcgccatcta aatcatcttc acctaataat gttaagtttt tatcttcttc atcgtcttca
     2581 tcaagaatat cgaatttttg aatggttggt gcgatttttt cttcaatatc gtctactgaa
     2641 taccaatcgc gaagtcccca aacgttatca cctacactta aaaaacgacc atccgtattt
     2701 aaatctgtgt agaattgaac gatacggtct tcaatttgtg catcttcgta atgaccaata
     2761 cgtttaaact catcaataat atcataaagg ttcatcgttg cattttgttc acttaaaagc
     2821 gtataagcca tatcaataaa tgatttttca tcaaccattt cttgtgtgta atcttgtaat
     2881 ttcatcagca catcttcctt tcaaaggtta acatttctgt tcattcggat atttcaattt
     2941 gtaaaaaata ggtgcgtatg accgtcacct tttgattatg ttgcgctaca ttcatacaca
     3001 tctattgcgt gatagatgcg ttttaaacat cgactttaac aaaattaaat tataaatcac
     3061 tgctgatgat ttcgcaatgt tttcagcgag atttttcgaa gccatatgaa atggtttgcg
     3121 gattggtaca tgtatgaatg acgaatcacc cgactaataa ttaatatatt tttctaatgt
     3181 gacataatca tccgtcgtca atgtctccac aaaattactt ttaacaaaca gcggtgtcag
     3241 ttgatgatta ggtccaaaca atgtgacttc aatcactttc gtatcatgat tttcttttcg
     3301 tacataggtc gccaattgac gcagtgcatt ttgcgcaatg cctgtatctc tatgtgcatc
     3361 atcaacgtaa agtgcacgaa taatcagccg ttcgttaaat gcttcaatcg ctaaaaatcc
     3421 tactttttct ccatctaaaa tgaagttaac aatttcaatc gggcctgctt tcgaaccctc
     3481 gctctttata agttttaatg aggatacata tttatggtcc aaatcgaggt aatagagacg
     3541 ctctttgccg atgggtcctt cttctttcgt tgccgtatgc ataaaacctg cacgctcata
     3601 cacattccaa gccgattcat tttctgcatc cacgactaag tacaaatgat taaaatccgg
     3661 aaaaatcatt tgcacatatt ctggtaatgt catcataatt ttcgtgccgt agccattccc
     3721 ttgatacgct tcattaatgg ataacgaacg tatgtacacc acttcatacg gtgtgtcata
     3781 gccctcgtgt tgataatgtt catgcagtac gaaaaatcca attacttcat cttgatcatt
     3841 tagtacgatg tttgcgactc tattgtcatc gtttaatgca tcatccaaga cttctttggg
     3901 taatgaagaa tagatacgtt gtcgctcatt taattcgaat tgatataacg catcacggta
     3961 ttgcttatca tataattgta tagtaatatc atcaaagcgt ttaatttttg ttgtcattgt
     4021 tttgaccatc cctttatttt ttattctcca tatacaatgt tgacataatt aaagggtttc
     4081 aaacaattat ttatagagat aatttagaac ttttatcatt agtgacctta ttgttatctt
     4141 caactactat tatctctcaa tttcgtggca ttaagaaagg ggttcacatg aacaagcaca
     4201 acaatttaaa gaaaaagaat cgtaatattg tttacaccat ttcgttcagt atcattttaa
     4261 ttctcacttt attagcagcc atctttccta aaacatttgg cgcatatgcc caaaatacat
     4321 atgatgcgtt agctttaaac tttggctggc tctttttaat tatcgttttt gtactcgaca
     4381 ttttcttaat tttcttagca ctttcgagat atggccgatt caaattaggc cgcgatgatg
     4441 aagagccaga attttcattt atgtcgtgga tcggtatgct tttttcggct ggcttaggtg
     4501 tcggcattgt cttttggggc gtggctgaac cgttaaccca ttacttgcat tcaccgtttc
     4561 caaaatcggt cgacggtcaa tcggtagaat ctgcgcgcct tgcgatgggt tatacttttt
     4621 ttcattgggg aatttcgcaa tggtcgattt tcgcaatgag cggtttaatc gtcgcctatt
     4681 tccaattccg gaaaaatcgg gatggtctga tttctactgc aatggaaccc gtttttggcg
     4741 aaacgtatcg acgcccattt cgtaacgtca ttgatatttt ggccatcatt gcaacagtta
     4801 tggggattgc gacttctatc ggtcttggta ttttacaaat tgctggtggt ttaaaccatg
     4861 tctttaaagt tccgaacacg tcgctcacat taattttgat tacgttactc atgacactca
     4921 ttttcctcgg ttctgcatta acaggtatca atcgtggcgt gaagtggcta agtaacataa
     4981 atattatgat tggtgcattg ttattgttgt ttatttttat tttcggggat ttacgattta
     5041 tcgtcgaaac attcaccgtt tcaattgggg actatttgac acatttcata cagtatagtt
     5101 tacgtatgga tccttatacg ggtgacaatt catggattca aaaatggact gtgttctatt
     5161 gggcatgggt catttcgtgg tcgccattta ttggtggttt tgttgctcgt gtctcaagag
     5221 gacggacgat tcgcgaattt gtcgtcggcg tcttaattat tccaccttgt atttcatttt
     5281 tatggatttc aggttttgga gggactgcta ttaactgggc attacatcat caagatggaa
     5341 ttgaaaaaat tgtcgatcaa gattatacgg tagcgctatt tgaattatta agcaagtttc
     5401 cgttatacga attgacaagt gctttagcca ttattttaat ttttactttt atcgtgacga
     5461 gtgcggactc aaccacacat atcgtatcag gtatggcgac aggtggcgtt gaaaatccta
     5521 agcgtaaaca caaaatggta tggggtattt taatcggtgc catttctgtt gcattaactg
     5581 ttgctggtgg cctcacaagt ttacaaaccg catcagtcgt aactggatta ccattttcga
     5641 ttatcttatt attgatgatt ttttcattga tgaatgcgtt gagacgtgag catacgaagc
     5701 attttaaaat gacgcatatt gatgatgaaa aggacttttc tcgtaccatt gaagaacgtg
     5761 agcgcgataa tgagatgtga taggcgaacc tattcacgca tcatcatttc aacatctact
     5821 tttaatttaa atattaggga gggactggga cattagtttt c
//
LOCUS       DANHPA010000118         5791 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.118, whole genome shotgun sequence.
ACCESSION   DANHPA010000118 DANHPA010000000
VERSION     DANHPA010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5791
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.118"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(501..1148)
                     /locus_tag="PTC28_002119"
     CDS             complement(501..1148)
                     /locus_tag="PTC28_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensing transcriptional repressor Rex"
                     /protein_id="HDK5717362.1"
                     /translation="MGKSMNKIPRATLKRLPLYYRFVNTLKAKGEDRVNSKAISEGLN
                     IDSATIRRDFSYFGELGKKGYGYNIDSLLEFFKSELSDSDIIKIGIVGVGHLGTALIS
                     YNFSIHDDMTITEAFDIREDIIGTTVGDITIKSMDDIKETIASGELEVVIITTPESAA
                     QAVTDQLVEAGIKGILNFTPKRVHAPQSVQVHQIDLGIELQSLLFFMKNYGTSEA"
     gene            1302..3254
                     /locus_tag="PTC28_002120"
     CDS             1302..3254
                     /locus_tag="PTC28_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDK5717363.1"
                     /translation="MILMQLSQITKSFDGEEIFEGVNFEVKTGERIGIVGRNGAGKST
                     LMKIIAGVESYDSGHISKIKGLKLGYLTQQMTLNTENTVFEEMAKPFEQVKAIGKRMQ
                     EETDWLAAHAEAYETTEYQTHIAKYEQLSNEFEQLGGYHYDSKIKTVLNGLDFSEADY
                     DRPINDFSGGQKTRLSLAQMLLSEPDLLLLDEPTNHLDMATTEWLEDYLKYFKGAIVI
                     ISHDRFFLDKIVTQIYDVSLGEVKHYVGNYAKFIQLRDQYFQKRLAEYERQQSEIKRL
                     ETFVEKNITRASTSGMAKSRRKMLEKMTRIEKPMLDARSANIQFDFDRNTGNDVMHIQ
                     DLEIGYRTPITAPIRFEINKGDHIGIIGPNGIGKSTLIKTLAKRLPPLSGQIIEGANL
                     KIGYYDQKQAEFRSNKTILDFVWDQYPHMPEKDVRAVLGRFLFTQDEVLKVINDLSGG
                     EKARLQLALLMLERNNVLILDEPTNHLDIDSKEMLEQALKNFEGTLIFVSHDRYFINE
                     LANRIFDLNKTGGHLYLGDYQYYLEKLEQQNALAAYDEQREDNNTSDDSARSQNTYQD
                     QKALRREKRKIERQIEADEQKITELEARIAAIDVAMTDDTTMNDYEKTQALANERTSI
                     EQSLEQVMTNWEELQLTISQFEDEMD"
     gene            3617..5200
                     /locus_tag="PTC28_002121"
     CDS             3617..5200
                     /locus_tag="PTC28_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HDK5717364.1"
                     /translation="MSSNTFFILLLVVALVGMTLITETVRRIRHQRMLTYHLEHFTRF
                     DTTENPHAVYDAYFNSRHTARNTIIDDKTWSDLSMDLLFDKLNATYTSIGENHLYSAL
                     RLQTSLVHYEFLEQLRPYPNQHREIVKRLVDLGKSIYPNYDKDILKQQYQWVYAFLLA
                     MPFVGLMISFFNLGIGLLWICFAFFLNIIISFRYNYYVEKDLKQLFIMGRVVRETEIL
                     SKMTITPEFNHSLKPLSSISRLRFLLINVETIPGYFVMVFKYMFLVDIHLYATLVRRF
                     IKHYDTVLECYRYIGELDSLLAVYQYRYHHDTSEPVEADHVTFEGLTHPLIDEAVPND
                     FDFNQNVLITGSNASGKSTFMKAVALNLIMAQAIRTVTADKFHYTPGMVKTTMANADD
                     VTSGDSYFMAELKSLKRLFLQDAAVQHYYFIDEIFKGTNTTERVAASHAVLDYLNQLS
                     HLKIIAATHDIELTEVLAHQYANYHFNEHVTDGEIVFDYHIKKGPANTRNALELIRIM
                     QFPNRIYTDAQAYVKQLET"
BASE COUNT         1920 a         1060 c         1000 g         1811 t
ORIGIN      
        1 ctatttttac actgtccttt ggattaatgc attatttaaa tttaattgtt ttgtcgctca
       61 ttatatttgc acttggcttc ttagtcggca ttgttccggc cttactatca actttaatat
      121 ctcaacggta tgaaaatata aaaggcaaag tattaggtat atttaacttt atccgatatt
      181 taggaatgac tttcggttct ataactattg gactgatatc acaacaatat atgcttttct
      241 atttttcatt catcttcata gtgatattaa caatttttct ctacattaag accgtacact
      301 ttaatcaagc aatgactgac atctatcatt tataaccttt tcgttagttg ttttatttga
      361 cttcctcatg aaattcaaaa aaggctagga aatctctccc ctagcctttg ctataaccgc
      421 tcatttgctt gtaaaaacaa atgatgaagt ctcacacttt gattcataca aatcactaaa
      481 atatttatac ttgatttatt ttacgcttca gatgtaccat aatttttcat aaagaagagt
      541 aacgattgga gttcaatccc taagtcaatt tgatgtactt gtactgattg tggcgcgtga
      601 acacgtttag gcgtaaaatt caagatacct ttgatacctg cttcgactaa ttgatcagtc
      661 actgcctgtg ctgctgattc aggtgtcgta ataataacaa cttctaattc tcctgaagca
      721 atagtttctt taatgtcatc catcgactta atcgtaatat ccccgactgt agtaccgata
      781 atgtcttctc taatgtcaaa agcttctgta atggtcatat catcatgtat tgaaaagttg
      841 taagaaatta acgccgtacc taagtgaccg acaccgacaa taccaatttt gataatatct
      901 gaatcactta attctgattt aaaaaattct aataaactat caatattata accgtaacct
      961 tttttaccta attcaccaaa ataagaaaaa tctcgacgta ttgtggctga atctatattt
     1021 aagccttcac taatggcttt tgaattaaca cgatcttcgc ctttcgcttt taaagtattt
     1081 acaaatctat aatacaaagg gagacgtttt aaagtcgctc taggaatttt gttcattgat
     1141 tttcccattt agaagtcctc cgatatgatt tctaatatat gtgatagctt tcacagtgtg
     1201 tgtgtttaat tataacttaa tttatatgat aaggaaacat taagtatttg atacatatag
     1261 ggtttgttgt acaataaata agaatgaaag gagtatgccc tatgatttta atgcagttaa
     1321 gtcagattac gaaatcgttt gatggcgaag aaatttttga aggcgttaat tttgaagtga
     1381 aaacaggtga gcgcattggt atcgtaggtc gaaacggtgc gggaaaatcc acattgatga
     1441 aaattatcgc aggtgtagaa tcatatgact caggccacat ctcaaaaatc aaaggtctaa
     1501 aactcggcta tttaacacaa caaatgactt taaatactga aaatacagtc tttgaagaaa
     1561 tggcaaaacc ttttgaacaa gtgaaagcga ttggcaaacg tatgcaagaa gaaaccgact
     1621 ggcttgctgc acatgcggaa gcttatgaaa cgacggaata tcaaacgcat atcgcaaaat
     1681 atgaacaatt atctaatgaa tttgaacaac tcggaggcta tcattatgat agtaaaatca
     1741 aaactgtgtt aaatggcctt gattttagtg aggctgatta cgaccgacct attaatgatt
     1801 ttagtggagg tcaaaaaaca cggctctcac tcgcgcaaat gttattgagt gagccagact
     1861 tgctattact cgatgaaccg acaaaccatt tagacatggc aacaacagaa tggttagaag
     1921 attatttgaa atattttaaa ggtgctatcg tcattatttc acatgaccgc ttcttcctcg
     1981 ataaaattgt gacgcaaatc tatgacgtct ctctaggcga agtgaaacat tatgtcggca
     2041 attatgcaaa atttattcag ttacgtgatc aatactttca aaagcgactc gcggagtatg
     2101 aacgtcaaca aagcgaaatc aaaagactag aaacgtttgt cgaaaaaaat attacccgtg
     2161 catctacaag cggtatggcg aaaagtcgtc gtaaaatgtt agaaaaaatg acacgtatcg
     2221 aaaagcccat gctcgatgcg agaagtgcga acattcaatt cgatttcgat cgcaatacag
     2281 gcaatgacgt tatgcatatc caagatttag agataggtta tcgtacaccg attacagcac
     2341 cgattcgttt tgaaattaat aaaggcgatc acattggcat tatcggaccg aatggtattg
     2401 ggaaatcgac attaattaaa actttagcga aacgacttcc ccctctctcc ggtcaaatta
     2461 ttgaaggtgc taatttaaaa attggttatt acgaccagaa acaagcagag ttccgttcta
     2521 ataaaaccat tttagatttt gtctgggacc aataccctca tatgcctgaa aaagatgttc
     2581 gtgcggtgtt aggacgcttt ttatttacac aagatgaagt gctcaaagtg attaatgacc
     2641 tttctggtgg cgaaaaagca agactccaac tggcattatt aatgttagag cgtaataatg
     2701 tactcatttt ggacgaaccg acaaaccatc ttgacatcga ctcaaaggaa atgttagaac
     2761 aagcattaaa aaactttgaa gggactttaa ttttcgtatc acacgatcgt tattttatta
     2821 atgaacttgc caatcgtatt tttgatttaa ataagacagg cggccatctg tatttaggtg
     2881 attaccaata ttacttagaa aagctagagc aacaaaacgc ccttgctgca tacgatgaac
     2941 aacgtgaaga caacaatacc agtgacgact cggcccgttc acaaaatacg tatcaagacc
     3001 aaaaagcgtt acgtcgtgaa aaacgtaaaa tcgaacgcca aatcgaagcg gatgaacaaa
     3061 aaatcacgga attagaagca cgtatcgcag caattgatgt tgcaatgacc gatgatacaa
     3121 caatgaatga ttatgaaaaa acacaagctt tagctaacga acgaacaagt atcgaacaat
     3181 ctttagaaca agtgatgaca aattgggaag aattacaact cacaataagt caatttgaag
     3241 atgagatgga ttgagcgtgg tggaattttc tactccgctc attttttata cgcgaaatac
     3301 agacaattca tccacattaa gaatcggata atatcaacta tccacaaagt tattctagtt
     3361 atccacaatt taggagaggt tttcttctta ctttatgcac acttatcccc actttatcca
     3421 cgaaaacgca tcgaacttac acacaagtta ttcacaaatt gtgcataagt acgcacgttc
     3481 cctcttgaca gatttcctac tacatgaatt tgaaatcatg tcccaatgat tcaaacacta
     3541 tcacaattca ttgatttcct catcatattg tgtaaaaatt tatataatct ttaaaatatt
     3601 gaaaggattt atacatatga gttcgaatac ttttttcatt ttactgcttg tagtggcact
     3661 cgttggtatg acattgataa cagaaactgt gcgtcgtatc cgccatcaac gtatgttaac
     3721 ttaccatttg gaacatttca cacggtttga tacaaccgaa aatcctcacg ctgtttatga
     3781 tgcatatttc aattctcggc atactgctag aaatacgata atcgacgaca aaacatggtc
     3841 agatttatca atggatctcc tatttgacaa actcaatgcg acatacacgt ccataggtga
     3901 aaatcattta tatagtgcat tacgattaca aacgtcactc gttcattatg aatttttaga
     3961 gcagctgcgt ccatacccga atcagcatcg agaaatcgtg aaaagactcg ttgacctcgg
     4021 aaagtcgatt tatcccaatt atgacaaaga catattaaaa caacaatatc agtgggttta
     4081 tgcattttta cttgctatgc cgtttgtagg ccttatgatt agttttttca atttaggtat
     4141 tggtctttta tggatttgtt ttgctttctt tctcaatatt attattagtt ttcgttacaa
     4201 ttactatgta gaaaaagatt taaagcaact tttcattatg ggacgggtcg taagagaaac
     4261 tgaaatactt tcaaaaatga caataacacc tgagttcaat cattcattaa aaccattaag
     4321 ttcgatttcg cggttacgtt ttttattaat taacgtcgaa acaattccag gatatttcgt
     4381 aatggttttt aagtatatgt ttttagtcga tattcattta tacgccacac tcgttcgtcg
     4441 ttttattaaa cattatgata ccgttttaga atgttaccgc tatatcggag aattggatag
     4501 tttattagca gtgtatcaat atcgttatca tcacgatacg tctgagcctg ttgaagcaga
     4561 ccatgtcaca tttgaaggtt tgacccatcc actgattgat gaagcggtac cgaatgactt
     4621 cgatttcaat caaaatgttt tgataacagg gtctaatgct tctggtaagt caacatttat
     4681 gaaagctgtc gcattgaatc tcatcatggc tcaagcgata cgtacagtga ccgctgacaa
     4741 gtttcactac actcctggta tggtaaagac gacaatggca aatgccgatg atgtcacaag
     4801 tggcgacagt tactttatgg cagaattgaa atcactcaaa cgattgtttc ttcaagatgc
     4861 agccgttcaa cattattatt ttattgatga aattttcaaa gggacaaata ctactgaacg
     4921 tgtcgccgct tcacacgccg tccttgatta tttaaaccaa ctgtctcatt taaaaattat
     4981 cgcagcgaca cacgatattg aattaacaga agttttagct catcaatatg ctaattatca
     5041 ctttaatgag catgtgaccg acggagaaat tgtgtttgat tatcatatta aaaaaggccc
     5101 ggcaaatacg agaaatgcgc tggaattaat tcgcatcatg cagtttccaa atcgtattta
     5161 cacggatgct caagcatatg tgaagcaact tgaaacttaa aagtatacta aaaatgatca
     5221 atataacgca aaaggagata gggcattaaa atttttgatg ttattgatgc aatattctcg
     5281 ttaaaattgc cctctcccac gaattatgct tttgattgcc ctcatggctt cgcgtttcct
     5341 aggggctagc ccttcaactc aattcgactt gattaaactg ttacacttgt tgacgcgtta
     5401 aaggattggg gggagcgtta cagaaatatc atgtgtcaca aagatttcgc cgtactgccc
     5461 ccgcatgact gactcgactt cttaaaagtg taaacattga gaagtcagac agctactgcg
     5521 ataaacagta accactatta aagagaagcg gcaactgtca acagtatgca ttccatcagg
     5581 catctcagcc ttctgggtaa tattatatga aatacagcga aactaagggc aagtttatga
     5641 aatctagaaa acaatagcat caacttttta tctaatttat gctcattttt cgtcgatgtt
     5701 ttcatcaata atgaatataa ttccatcaaa agcaagacgt ttattgtact taatcattat
     5761 gaacattatt aggggaagaa atcattatca a
//
LOCUS       DANHPA010000119         5774 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.119, whole genome shotgun sequence.
ACCESSION   DANHPA010000119 DANHPA010000000
VERSION     DANHPA010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5774)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5774)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5774
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.119"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(65..1579)
                     /locus_tag="PTC28_002122"
     CDS             complement(65..1579)
                     /locus_tag="PTC28_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HDK5717365.1"
                     /translation="MKQTKKKKHVSLVFWISLLLCSLFVLVGAIFPKQMEETTQSITT
                     WIGQNFSWYYLLLLLAIFLICVYLLFSRYSQITLGEEGEEPEFSLKSWFAMLFSAGMG
                     IGLVFWTTAEPISHAYTATPIHQAGTQAAIDDSLQFAFFHWGIHAWAVYAIVALAFAY
                     FNFHKGYPGLVSATLTPLFGEKQMQGPLGKLLDILAVIATVTGVSATLGFGALQISEG
                     LNFLFNIPANFTTQILIIIMATALFIWSTWSGLSKGIKMLSNINMILAFIVLVVVFII
                     GPTLYILNMFTNSLGHYIAHFFDMSLRLTINNPEKSQWIQNWTVFYWAWWISWAPFVG
                     IFIARVSRGRTIKEFIIGVLFVPSLVCFIFFAVFGASAIYLQDNGIANIAGEAIETAT
                     FATLEHFPLGFVMSIVTLVVVMIFFVTSADSATYVLGMLSTNGDNYPGSWVKVSWGIM
                     LALFAFVMLLTGGTQAIQNLLIIAALPFSFVIIFMIWSLFKALAAERPRLSKRK"
     gene            complement(1636..2646)
                     /locus_tag="PTC28_002123"
     CDS             complement(1636..2646)
                     /locus_tag="PTC28_002123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase family
                     protein"
                     /protein_id="HDK5717366.1"
                     /translation="MEAIIATQPFQLAEGQKFEKVSRELPTPEAHDILIKVYATGINP
                     VDTKMRQAPLNAEARVLGFDAAGVVEAVGDAVTDFKPGDRVYYSGSNQRDGSNQTYQL
                     VNENYLAHMPKTLSFAEAAALPLTAITAYETLFDVFNISPNPQQNQGKTLFIINGAGG
                     VGSIATQIAKTYGLTVVTTASRPETNAWSKKMGADVVLNHKEDLAKQFDDQNLSRPNY
                     IFCTYDTDHYYDVMIDLVQPRGHIATIVAFNKNQDLNALKQKSITFTHEFMFARAIHG
                     VDEGMYRKYLEDVTAKVDAGQYQTTLNSVLTGLTPENVLKAHEMMEAQSHIGKLVIEI
                     VE"
     gene            2748..3737
                     /locus_tag="PTC28_002124"
     CDS             2748..3737
                     /locus_tag="PTC28_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDK5717367.1"
                     /translation="MQLSILDYSPIFEDRTPQDALNHSVDLARYAENLNFHRYWLAEH
                     HEVHSVASTAPEILATMILEQTSRIHVGAGGIMLPHYSPYKVAETFKMLEARHPGRVD
                     IALGKSPSFQNVSQALNEDKQTLTDFDQQLMDLTKYFNNDSSTPHRFQHLKAMPVIET
                     QPQFCILGTSENSAERAAQLGAVFVFGAFGQKTIEKQRIIQRYRKQFQHYHPEGQPYL
                     IVSTFVLAHENSQIRAQLEDSLHYWLQRIHYLKQPKTLLSPETIQQKNWSVRELEKRA
                     ENAPRIISGDGETVAHELHELQRTFDADELLLFPQLYGEENRKHCLALIAKYW"
     gene            complement(3898..5532)
                     /locus_tag="PTC28_002125"
     CDS             complement(3898..5532)
                     /locus_tag="PTC28_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDK5717368.1"
                     /translation="MNIVNVSQLTKSYNGNKVFDHIKFEVNQNDRIGLIGRNGEGKTT
                     LFKLIAKKEQADEGFISIAKDVKVGLLAQIPNLPPDAIVINQLYQAFDTLNGIEQRMR
                     QLEIKMVEGADDINQILKQYDRLQNEFETLGGYDRDYKIDIVLNGLKIAHLKTQQWSN
                     LSGGMQTKVGLAMLLLQSPELLLLDEPTNHLDIESIEWLTKFIQQYKGAVMVISHDRY
                     FLDETVTQILEIDQQQLYVYPGHYSNFVIEKEKRILNEFKAYQTQQKKIQKMKAQIKQ
                     LKIWANQAKPPNASMHRRAKSMEKALARIEVKPKPRLAYNKMKLDIAQSESASKDIFV
                     LKDVAKMYDDILFEGVNMKIRRRDKVAIVGANGTGKSTLLKLLLREIVPDEGHVQIAE
                     TNRIGYLAQHQFNTGEMSVLEAFRQYAHVSEGEARNHLAKYLFYGYDVYKKVKDLSGG
                     EKMRLRWAQMISQQFNVLILDEPTNHLDIDAKEALEEALEDFDGTVIAVSHDRYFFDK
                     HFSKTYWIDNKQLHYYPGHYSYAKQKRYSEARQKTN"
BASE COUNT         1753 a         1230 c          969 g         1822 t
ORIGIN      
        1 tagataccat taaaaaaaga agtgaaactg ttatctaaca atttcacttc ttaatgttta
       61 gtgatcattt tcttttactt aatcgtggtc gttctgcagc aagggctttg aataatgacc
      121 aaatcataaa gataatcaca aatgagaaag ggagcgccgc aataattaat aaattttgaa
      181 tagcttgcgt tccacctgtc agtaacataa cgaatgcaaa aagtgcgagc ataatgcccc
      241 aactgacttt cacccaactg cctggataat tgtcaccatt tgtactgagc ataccgagca
      301 cataagtcgc tgaatctgct gatgtcacga agaaaatcat cacgaccacg agtgtgacaa
      361 tactcatgac gaagccaagt ggaaaatgtt ccaacgtcgc aaacgtggct gtctcaatcg
      421 cttcacccgc aatattcgca ataccattat cctgtaaata aatagctgat gcgccaaata
      481 ctgcaaagaa aatgaaacag acgagtgatg gtacgaataa cacacctatg ataaattctt
      541 taatcgttcg ccctcttgaa acacgcgcga tgaaaatacc tacaaatggt gcccatgaaa
      601 tccaccatgc ccaataaaag accgtccagt tttgaatcca ttgtgacttt tctggattgt
      661 taatcgttaa acgtaaactc atatcgaaaa agtgtgcaat gtaatgacct aaactattcg
      721 taaacatgtt taatatgtaa agcgtcggcc caatgataaa aacaactacg agcacgataa
      781 aagcaagaat catgttaata ttacttaaca ttttaattcc tttacttagt ccagaccatg
      841 tcgaccaaat aaataacgcc gtcgccataa tgatgatcaa aatttgtgtt gtgaagttgg
      901 ctggaatatt aaataagaaa tttaaacctt cactaatttg aagcgcaccg aaacctaatg
      961 ttgccgatac acctgttact gtcgcaataa ccgcaagtat gtctaacaat ttgccaagcg
     1021 gtccttgcat ctgtttttca ccaaacagcg gtgttaacgt cgcactcact aatccaggat
     1081 agcctttatg aaagttgaaa tatgcaaacg ccaacgcaac gatcgcgtag accgcccatg
     1141 catgaatgcc ccaatgaaaa aaggcgaatt gtaaactgtc atcaatagcc gcttgcgttc
     1201 ctgcttgatg aataggtgtc gccgtgtatg catgtgaaat gggctcggca gtcgtccaga
     1261 aaacgagacc aatccccatt cctgcactaa acaacatcgc aaaccatgat tttaatgaaa
     1321 attccggctc ttccccttct tcacctaatg taatctgact gtatctcgaa aaaagtaaat
     1381 aaacgcaaat caagaaaata gccaataaca ataataaata gtaccaacta aaattttggc
     1441 caatccaagt agtgatcgat tgcgtcgttt cttccatctg ttttggaaaa attgcgccaa
     1501 ctaggacgaa taaactacat aacagtaacg atatccaaaa cacgagactc acatgtttct
     1561 ttttctttgt ttgtttcatg actttaactt ccccttaatc gttagttaac agtcatattc
     1621 cctcttttgt gcaatttatt ctacaatttc aatgacaagt ttgccgatat gggattgtgc
     1681 ttccatcatt tcatgcgctt tcaatacatt ttccggcgtt aaacctgtta agactgaatt
     1741 taaagtcgtt tgatattgac ctgcatcgac ttttgcagtt acatcttcta aatatttgcg
     1801 atacatccct tcgtcgacac catgaattgc acgcgcaaac ataaattcat gcgtaaacgt
     1861 aatgcttttc tgtttcaaag cgttcaaatc ttgattttta ttaaacgcaa caatcgtcgc
     1921 aatatgacct ctaggctgta ctaagtcaat catcacatcg taatagtggt ctgtatcata
     1981 tgtacagaaa atgtaattgg gacgtgacaa gttttgatca tcaaattgtt tagctaaatc
     2041 ttctttatga tttaacacaa catctgctcc catcttttta gaccaagcat ttgtttctgg
     2101 acgagatgcc gtggtaacca ccgtcaaacc atacgtcttc gctatttgcg tggcgatact
     2161 tccaacaccg cctgcaccgt taatgatgaa caacgtctta ccttggttct gttgaggatt
     2221 tggagaaatg ttgaatacat cgaacaatgt ttcgtaagcc gtaatcgctg ttaaaggtaa
     2281 cgccgccgct tcagcgaatg acaatgtttt cggcatatgc gctaaataat tttcattcac
     2341 gagctgatac gtctgatttg agccatctcg ttgattcgat cctgaataat atactcggtc
     2401 acccggtttg aaatccgtaa ccgcatcgcc gaccgcttca accacacctg ccgcatcaaa
     2461 acctaggaca cgtgcctcag catttaacgg ggcttgccgc attttcgtat caaccggatt
     2521 gatccctgtt gcgtacactt tgattaaaat atcatgtgcc tctggtgttg ggagctcacg
     2581 cgatactttt tcaaactttt gaccttctgc taattggaac ggttgagttg caataattgc
     2641 ttccatagat ttcccctgct ttctatttat ttttaagcat tgtactcgtg tttatgctta
     2701 ttttgcttga taattgtagt ataacacgct ttgaaaggaa gtcttatatg caactcagca
     2761 ttttagatta tagtcctatt tttgaagacc gcacaccgca agatgcactt aatcatagtg
     2821 ttgatctcgc gcgttatgct gaaaatctga actttcaccg ctattggcta gctgagcacc
     2881 atgaagttca ttctgtcgca tcaacagcac ctgaaatttt agcaacgatg attttagaac
     2941 aaacttcacg cattcatgtt ggcgccgggg gtattatgtt gccacattac agtccatata
     3001 aagtagctga aacttttaaa atgctagagg cacgccatcc tggacgtgtc gatattgcac
     3061 ttggaaaatc acctagtttt caaaatgtgt ctcaagcatt gaatgaagac aaacaaactt
     3121 taacagactt tgatcagcaa ttgatggact taacaaaata ttttaataat gacagctcga
     3181 ccccacatcg ttttcagcat ttaaaagcaa tgcccgtcat tgaaacgcaa ccgcaatttt
     3241 gcatcttagg cacgagtgaa aacagcgcag aacgagccgc acaattaggt gctgtttttg
     3301 tatttggggc gttcggacaa aaaacgatag aaaaacaacg tattattcaa cgttatcgaa
     3361 aacaatttca acactatcat cctgaggggc aaccttatct catcgtctct actttcgtct
     3421 tagcacatga gaatagtcaa atccgtgcac aattagaaga cagtctgcat tactggttgc
     3481 aacgcattca ttatttaaaa cagccgaaaa cacttttaag tccagaaacg atacaacaga
     3541 aaaactggag tgtacgtgaa cttgaaaaac gcgccgaaaa cgcgcctcgt atcatcagtg
     3601 gtgacggaga aaccgtagcg catgaactcc acgaattgca gcgtactttt gatgctgatg
     3661 aacttttatt atttcctcaa ctctatggtg aggagaatag aaaacattgt ttagcactca
     3721 ttgcaaagta ttggtgaaac ctaaataaaa aggtaatgct tctcatagcg ataagctttt
     3781 aacgctaaag aacacattac cttttttcat ttttcaataa tttgttgatt ttccattgaa
     3841 atctatcatg actatcagat gcgctttaac ttgggaagga tgagcaaaac agcaccatca
     3901 attagttttc tgtctcgctt ctgaatatct tttttgtttc gcataactgt aatgacccgg
     3961 ataataatgc agctgtttat tgtcaatcca gtacgttttt gaaaagtgct tatcaaaaaa
     4021 atatcgatcg tgtgaaacag caataacagt gccatcaaaa tcctctaaag cttcttccaa
     4081 tgcttctttg gcatcaatat ctaaatgatt tgtcggctca tcaagtataa gcacattgaa
     4141 ttgttgagaa atcatttgcg cccatcttaa tcgcatcttt tcaccaccac ttaaatcttt
     4201 tactttttta tagacatcat acccataaaa aagatatttt gccagatggt ttctggcttc
     4261 tccttctgac acatgtgcat attgtctaaa agcctcaagt actgacatct ctccagtatt
     4321 aaattgatgt tgcgccaaat aaccaatgcg gtttgtttca gcaatttgaa catgaccttc
     4381 gtcaggcaca atctctctta acaacaattt taacagcgtg cttttacctg ttccatttgc
     4441 acctacaatg gccactttat cacggcgtct aattttcata ttaacccctt caaataggat
     4501 atcatcatac attttagcga catcttttaa cacaaaaata tcttttgaag cactttccga
     4561 ttgggcaata tctaatttca ttttattgta tgctagtctg ggtttaggtt tgacttcgat
     4621 acgcgccagt gctttctcca tgcttttagc acgacgatgc atcgacgcat ttggtggctt
     4681 tgcctggttc gcccaaattt ttaattgctt aatttgggct ttcatttttt gaattttctt
     4741 ctgctgggtt tgatatgctt taaattcgtt taaaatacgc ttctcttttt caatgacaaa
     4801 atttgaataa tgaccgggat atacatataa ctgctgttga tcaatttcta atatttgagt
     4861 gaccgtttca tctagaaagt aacgatcatg tgaaattacc atcacggcac ctttatattg
     4921 ttggataaac tttgttagcc attcaatact ttctatatct aaatgattcg taggttcatc
     4981 aagcagtaac aattctggtg attgaagtaa caacatcgct aaacccactt ttgtctgcat
     5041 tcctccggat aaattggacc attgctgcgt tttaaggtgt gcaattttta aaccgttgag
     5101 cacaatatca attttgtaat ctctgtcgta accccctaaa gtctcaaatt cattttgcaa
     5161 tcggtcatat tgctttaaaa tttgattgat gtcatccgcc ccttcaacca tcttaatttc
     5221 caactgtctc attcgttgtt cgataccatt caaagtatcg aaggcttgat aaagctggtt
     5281 tattacaata gcatcgggtg gtagatttgg gatttgtgct aggagaccta ctttgacatc
     5341 cttagcaata ctaataaagc cttcatctgc ctgctctttt ttggctatta atttaaataa
     5401 agtcgttttc ccttcaccat ttcgccctat taaaccaatt cggtcatttt gattcacttc
     5461 aaacttaata tgatcaaaga ccttatttcc attatacgat ttcgtgagtt gactcacatt
     5521 gacgatattc attttttatt cctccatatc actagaggaa attgtgtcag tattcctcta
     5581 gaagatgtat ttgtttaaaa ttagacagac tacaccaatt tttaacaaaa agcgcaaatt
     5641 ttccacgtat aatatggaca aatcttacac gctttagatc ttctaaaaac ataccgacac
     5701 ctccgttcat ataatgataa atctaattgt agcctagttt cacttgtgat tcaaatcact
     5761 tatacttatt ttaa
//
LOCUS       DANHPA010000120         5743 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.120, whole genome shotgun sequence.
ACCESSION   DANHPA010000120 DANHPA010000000
VERSION     DANHPA010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5743)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5743)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5743
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.120"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..888
                     /locus_tag="PTC28_002126"
     CDS             <1..888
                     /locus_tag="PTC28_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase WbuB"
                     /protein_id="HDK5717369.1"
                     /translation="YFIFKHKNDFDYIYVTSPNIFIAWATLFMKKAKRPDYILEVRDL
                     WPDSVNSIKGINLKLTWPLLKRLEKIMYNRADKIVINNKGFREHIQQMLDKAVPIEFI
                     PNSVSQEERFTEEKYEDFRVIYTGNIGYAQDVDHLIELFSLLNDHKINVTAIVYGVKA
                     PKFREAVQHLEFVTLKHAMSRERCLQEISRHHVALSILNENDTFLNVLPGKIVDAIGV
                     NTLPVTNIGGKMAEDINAFRIGFAEKKATPQILLEKIIAYRDNPSHFESQLVNVRRYR
                     NQFLNWETNIKALIRFLKE"
     gene            894..1814
                     /locus_tag="PTC28_002127"
     CDS             894..1814
                     /locus_tag="PTC28_002127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5717370.1"
                     /translation="MPEVQYNVICENVTKIYDLNRSRKDKLLSLFTFGKSYQFKPYYA
                     LKDVSFKVERGTSVGIIGLNGSGKSTLSNILGQVVMPTYGKVNTDGKPSLIAIGAGLN
                     PSFTGEENIRYKCLMHGMSTKEINDKFDEIVKFSELDEFIYQPLKSYSSGMKSRLGFS
                     IAIHTDPDILIVDEALSVGDETFSNKCIDRMKAFQKQGKTIFFVSHSASQIRKMCDKA
                     LWIHYGQMVVYDDVNVVIKRYNALVQKIKHMPKSEQVEYKKKKLQQQQVGHLDEVTIS
                     QKNDVSLMTHGLIGVTLIGWFVAMYFQLFG"
     gene            1834..2649
                     /locus_tag="PTC28_002128"
     CDS             1834..2649
                     /locus_tag="PTC28_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HDK5717371.1"
                     /translation="MIKLDFDTMTKEDLLKANNQKVKLIVDEIDFYIFINIKPNNQRL
                     LVHTNGAINIKKSQPPVFLRNSWRDDFDANCLFIDDRTIHDSEVNLGWGLGTKERHYV
                     NDYARISQKVSQLLNVEDNQVTYYGSSGGGFVSILLATLHNHSRAIVNNPQTYVHRYR
                     KKNVVDAYQVVFEDMEFEAVNKMYANRVSSTSLMKKCNRVPEILYVQNRLSDEDMENH
                     VIPFIRMLDKYQLDSSKINFLLYNDKKSGHNPLPKDKTLELVNLFMKRQLNIY"
     gene            2697..4028
                     /locus_tag="PTC28_002129"
     CDS             2697..4028
                     /locus_tag="PTC28_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDK5717372.1"
                     /translation="MKKVAMFVWNHFTNDARVNRECTALAEDGYDVDLIAINDPKNTD
                     IEAFEQREPHFRVHRVKRYPMLIQVYADYGKRFLIIIGGVSFTIAAGLFFINLKLMLG
                     YLAILLAGMVILKVKKLRKWVVNGAIIARMIIKGYQQKADIYHSNDLNTLPQGIVCSK
                     LRLHPKPLVYDSHEVQTDRTGYNPERIKKIERFLLQFVDTMMVENHTRAQHNECLYGF
                     YPQPLYNYSVLYDIEQQPYYNLHEKLGLNQNEKILLYQGGLQQGRGLEKLIEAMPMIQ
                     EGDLVFVGGGKLTETLKAQAQQSEARDRIFFLDKVPFEKLPQITREAFVGFQVLQNVC
                     FNHYSASSNKLFEYIMAHVPVIACDFPEIKRVVEENEVGIATDTHSSQNIAAAVNHLL
                     QHPELYDRYRANTRRAKMIYNWQNEKQKLLNVYNTLDDNVSFIGKIQPQMK"
     gene            4138..4773
                     /locus_tag="PTC28_002130"
     CDS             4138..4773
                     /locus_tag="PTC28_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HDK5717373.1"
                     /translation="MKFKIISLLLASGIVLAACGNDDDQKNTNNADNDTKTEQTTDNN
                     QNSHDNDRDDNDDQNTNQHTKTQTIDVKDVKTTPEDAIKTAKSSFDGDVKQVEYKKEN
                     GQWVYDIDLRSNNEEAEVKVSDKDNKVLNTNKEKEMDNDNDKTINYGDAIDFKEAVKK
                     AQEQQKGDLKKWSLDNDDGQFVYNIELMTDNGEQELVLDAKSGKVLQQEND"
     gene            complement(5167..5538)
                     /locus_tag="PTC28_002131"
                     /pseudo
     CDS             complement(5167..5538)
                     /locus_tag="PTC28_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168928.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
BASE COUNT         1984 a          904 c         1072 g         1783 t
ORIGIN      
        1 tattttattt ttaagcacaa aaatgatttt gactatattt atgtaacaag tcctaatatt
       61 tttattgcgt gggcaacttt gtttatgaaa aaagcaaaga gaccggatta tattctggaa
      121 gtcagagatt tatggccaga tagtgtgaat agtataaaag ggatcaatct caaattaact
      181 tggccattgc tcaaacgatt agaaaagatt atgtataacc gtgcagataa gattgtcata
      241 aataataagg gctttcgtga gcatatccag caaatgttgg ataaggcggt tcccatagaa
      301 tttataccta actcagtcag tcaagaagaa cgtttcacag aggagaaata tgaagacttt
      361 cgggtgatat atactggtaa tatcggttat gcgcaagatg ttgatcattt aattgaattg
      421 ttcagtttac ttaatgatca taaaattaac gttaccgcta ttgtttatgg tgtgaaagca
      481 ccgaagttca gagaagcggt tcaacattta gaatttgtta cgcttaaaca tgcgatgagt
      541 cgagaacgat gtcttcaaga aatatctaga caccatgttg ctttgtcgat tttaaatgaa
      601 aatgatacgt ttttaaatgt tttacctgga aaaattgtag atgcgatagg agtcaatacg
      661 ctccctgtca cgaacattgg tggcaaaatg gcagaagata ttaatgcttt ccgaattggt
      721 tttgcagaaa agaaagcgac accccaaata ttattagaaa aaattatagc ctatcgagac
      781 aacccttcac actttgaatc tcagttagtt aatgtcagac gctatcgtaa tcaattttta
      841 aactgggaaa cgaatattaa agcattaatc aggttcctta aggagtgaat agtatgccag
      901 aagtacaata taatgtgata tgtgaaaatg tcactaaaat ttatgatctg aatcgtagtc
      961 gtaaagacaa attactctct ttattcactt ttggaaaatc atatcaattt aaaccttatt
     1021 atgcattgaa agatgtgagc ttcaaagtgg aacgaggtac gtcagttggg attattggat
     1081 taaatggttc tgggaagtcg acactctcaa atatattagg acaagtggtg atgccaacat
     1141 atggaaaagt aaacacagat ggaaaaccgt cattaattgc aattggtgcg ggactcaacc
     1201 cctcttttac gggtgaagaa aatattcgct acaaatgtct gatgcatggg atgtctacta
     1261 aagaaatcaa tgacaaattt gatgaaatag ttaaatttag tgaactggat gaattcattt
     1321 accaaccgct taaatcatat tcaagtggga tgaagtcgag attaggtttt tctattgcaa
     1381 ttcatacgga tcctgatatt ttaattgtcg atgaggcatt atctgtcggt gatgaaacgt
     1441 tttcgaataa gtgtattgat agaatgaaag catttcaaaa gcaaggaaaa acaatctttt
     1501 ttgtttctca ttctgcaagt caaattagaa agatgtgtga taaagcactt tggattcatt
     1561 acggtcaaat ggtcgtatat gatgatgtca atgttgtgat caaacgttat aatgcattag
     1621 ttcaaaaaat taaacatatg cctaagtcag aacaagtcga atacaagaaa aagaaattac
     1681 agcaacagca agtgggtcat cttgacgaag tgactatttc tcaaaaaaat gatgtatcgc
     1741 taatgacaca tggattgatt ggtgtcactt tgataggttg gttcgtagca atgtattttc
     1801 aattatttgg atagaaaatg gtaggtattc tcaatgatta aattagattt tgacacaatg
     1861 actaaagagg atttgttaaa agcaaataat caaaaagtta aactcatcgt agacgaaata
     1921 gacttttaca ttttcataaa tataaaaccg aataatcagc gtcttcttgt tcatacaaat
     1981 ggtgcgatta atatcaaaaa atctcaaccg cctgtatttt taagaaacag ttggagagat
     2041 gattttgatg caaattgtct gtttattgat gatcgcacaa tacatgacag tgaagtcaat
     2101 ttaggatggg ggttaggaac caaagagcgg cactacgtta atgattacgc acgaattagt
     2161 caaaaagtga gtcaactttt aaatgtcgag gataatcaag tgacgtatta tgggagctca
     2221 ggcggtggat ttgtatctat tttgttagcc acgcttcaca atcattcacg tgctatagta
     2281 aacaatcctc aaacctatgt gcatcgatat aggaaaaaga atgtagtgga tgcatatcaa
     2341 gttgtttttg aagatatgga atttgaagcg gttaataaaa tgtatgcaaa tcgcgtctct
     2401 tccacaagcc ttatgaaaaa atgtaatcgt gtacctgaaa tactctatgt tcaaaaccgt
     2461 ttaagtgatg aagatatgga aaatcatgtg attcctttta tccgaatgtt agataaatat
     2521 caactggaca gttctaaaat taactttctt ttatataatg acaagaaatc cggacataat
     2581 ccattaccta aagataaaac tttggaatta gtcaatttat ttatgaaaag acaattgaat
     2641 atttattagt aagtatattt ttgactggaa aaccataata aagaggagat actgaagtga
     2701 aaaaagtagc gatgttcgtg tggaaccatt tcaccaatga tgcgcgggtc aatcgagagt
     2761 gtacggcatt ggccgaagat ggatatgatg tagatttaat tgctatcaat gatccgaaaa
     2821 acaccgacat tgaagcattt gaacaacgag aacctcattt tcgagtgcat cgtgtcaaac
     2881 gctatcctat gttaatccaa gtctacgctg attatggaaa gcgattttta attataatcg
     2941 ggggtgtctc atttacgata gcagcgggat tattttttat taatttaaag ttgatgctcg
     3001 gttacttagc gatattgctt gctggaatgg tgatactcaa agtaaaaaaa ttacgaaaat
     3061 gggtcgtgaa tggtgcgatt attgcacgta tgattattaa agggtatcag caaaaagcag
     3121 atatctatca ttcgaatgat ttaaacactt tacctcaagg cattgtatgt tcaaaattgc
     3181 gcctccaccc taagccatta gtgtatgata gtcacgaggt acaaactgat cggacagggt
     3241 ataatcctga acgtattaag aaaatagaac gttttttact gcaatttgtt gatacgatga
     3301 tggtggaaaa tcatacacgc gcccaacata acgagtgtct ttatggcttt tatccgcaac
     3361 cattatataa ttattctgtt ttatacgata ttgaacaaca accttattac aacttgcacg
     3421 aaaaattggg tctcaatcaa aatgaaaaaa tattgctcta tcaaggtggc ttacaacaag
     3481 gtcgtggtct ggagaaactt attgaagcca tgccgatgat tcaagaaggg gatctcgtgt
     3541 ttgtgggcgg tggcaaatta acagaaacac ttaaagcaca ggcccaacag tctgaagcgc
     3601 gagatcgaat tttcttttta gataaagtac catttgaaaa gctaccgcaa attactagag
     3661 aagcatttgt tggtttccaa gttctgcaaa atgtgtgctt taatcattat tctgcgagtt
     3721 ctaataaatt gtttgaatat atcatggcac atgttccggt cattgcttgt gacttccctg
     3781 aaatcaaacg tgtcgtagaa gaaaatgaag ttggaatcgc tacagatacg catagtagtc
     3841 aaaatattgc ggctgctgtg aatcatttat tacaacatcc tgaattgtat gaccgttacc
     3901 gtgcgaatac gagacgtgcg aaaatgattt ataattggca aaatgaaaaa caaaaattat
     3961 taaatgtgta caatacactt gatgataacg tttcatttat agggaaaata cagcctcaaa
     4021 tgaaataaac agctcaacct tttatccgat attgagattt atgtgatatg aatatgtctt
     4081 aaaatccatt caattgggta tatcaattat aaatactaat attggaggtt tttaaatatg
     4141 aagtttaaaa tcatatcttt attattagca tcaggaatcg tcctagcagc ttgtggtaac
     4201 gatgatgatc aaaaaaatac gaacaacgca gataacgaca caaaaacgga acagactact
     4261 gataacaatc aaaatagcca cgacaatgat cgtgatgaca atgatgatca aaacacaaat
     4321 caacacacta aaacacagac gattgatgtt aaagacgtaa aaacaacacc tgaagatgcc
     4381 attaaaacag caaaatcttc atttgatggt gacgtgaaac aagtggaata taaaaaagaa
     4441 aatggtcaat gggtttatga cattgattta agaagcaata atgaagaagc agaagtcaaa
     4501 gtatctgaca aagataataa agtgctaaat acaaacaaag aaaaagaaat ggacaacgat
     4561 aacgacaaaa cgattaatta cggagatgcc attgatttta aagaagcagt gaaaaaagca
     4621 caagaacaac aaaaaggtga cttgaaaaaa tggtcattag ataacgatga cggtcaattt
     4681 gtttacaaca ttgaattgat gacagataat ggtgaacaag aattagtact cgatgccaaa
     4741 tctggtaaag tgttacaaca agaaaatgat taatgtgacg tcttaatatt ttgctgaact
     4801 tacgctcttt cctttaagaa catgtcactt gtatgcgatt gccgtctttc ctttttgaac
     4861 atgtcgcttg catacgattg ccgtcttgga ctcgcgtttc ccaggggctg aacctacaac
     4921 taaccaacgc tttgattata ctgtcacatt tgttgaagcg ttggtggatt ttccggttca
     4981 gctgatccct cgggagtctc gtccgcccgg caatcttgca tgaacaggcg taaggaaaga
     5041 gggcattccc attctatcga cttaattgac atcatctaga tagctactcc gtcaaacttt
     5101 ggccagaatt aaagtcaaaa gcttcttgtt cgaatttatg tagtacctct ttttatgagg
     5161 cgtttacatt aattctttaa aagtatagag tcgagttttg atattttgtt tgcaagcttc
     5221 tacacctaac gatattgctt gatgtctctt accgacacca ttattaccta agaagtatat
     5281 attgatacgc ttctctagaa aatacatgga ttttaatgtg agtacttctt gtttattaat
     5341 gcttggttga aacgtgaaat caaactcaat caaatgttta atcttaggga aacttgctaa
     5401 cttaatagca cgtttaaata tttgttcagc tttatattct acttcctttt ccctcaactt
     5461 aagtaaaatc tcaattaaag atttttgatt cttggatagt gattctaaat acttcggcta
     5521 atagtcatgt attttgatac tctcttcctc atttttctta cctttatttt tctaactcat
     5581 tttctttccc agcttcgtaa tatttttaac tgtccttagg tcgcaatgat actgtctacc
     5641 cagttcagca taatttgttt ttattcctgt tataatctaa aataacactc attcgtatat
     5701 atcatgtctc aatcaaacaa tctccaatca aaaattgagt taa
//
LOCUS       DANHPA010000121         5729 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.121, whole genome shotgun sequence.
ACCESSION   DANHPA010000121 DANHPA010000000
VERSION     DANHPA010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5729)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5729)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5729
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.121"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..1464
                     /locus_tag="PTC28_002132"
     CDS             <1..1464
                     /locus_tag="PTC28_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M4 family protein"
                     /protein_id="HDK5717374.1"
                     /translation="SLSPNVYAESSSEKPLEKNFKTTVKSKADANKALKELPSDVKDN
                     YKDYDVVDALTDDLGYTHYTLQPVVDGVHAKDQEVKVHVDKKGQVVLINGEVNAEKVD
                     PTNSVSISKDAALSTAFKAVDMKQSEASNLDEDVVKVNDVEIDGEDNKYVYHVELVTM
                     EPDVSHWDLKVDAETGEVVEKTDLVAHAAATGTGRGVLGDTKRININSIDGGYSLEDV
                     TGSAVMATYAFNPASGSADLITDPDTNFTDDYQRAGVDANYYAKKVYDYYASKFDRRS
                     YDNRDSDIMSIVHVNNFQGQDNRNNAAWIGDKMIYGDGDGTTFTALSGADDVVAHEIT
                     HGVTQETAGLIYRGQPGALNESMSDTFAYFMDPGDTLIGEDVYTPRRPGDALRSMSNP
                     EQFNQPGHMRDYVNTSSDHGGVHTNSGIPNKAAYLTVNKIGQEQAEQIYYRALTSYLT
                     STSNFADAKASLVRAALDLYGEDVARQVEAAWEEVGV"
     gene            complement(1671..2795)
                     /locus_tag="PTC28_002133"
     CDS             complement(1671..2795)
                     /locus_tag="PTC28_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717375.1"
                     /translation="MKVTFEAIRHQQGWIEAVYYDERHEGTIRFEMADPIEVRDDLVA
                     EALAALCGQYYDMIEMEWKVSQRTKRQIEQRTGAKLICKGRMLFWNINTIMRHDIKTL
                     NFNGDVYNLSAFALTPGDVNAVSLDFGWESAHMYDMFDEWQSRIVKTNVMETHFPLII
                     SDYYMIGSILYKDFFNTTYMVTGMQLNPLTVNMTKMEAEQAIAGMVNLPHSLGLTAVG
                     HTKIACQRWPHMLEQACRAVRTSQPHIGVQQRLLIDVENERGRLGLGAYANQVQPTEI
                     AWGTDERLDFLALYLLKYGGRAQAEKLVQHIPLEADALVQRCDFQFYDRYYPGVMHYM
                     DKSIREAVQQQLEKYGIVMMSESDWQNFMAVRTWIQQTRR"
     gene            2982..3191
                     /locus_tag="PTC28_002134"
     CDS             2982..3191
                     /locus_tag="PTC28_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717376.1"
                     /translation="MRVLLRAAIAIGVILFAAHYFQDNDNLAAVENYKNDIVQSSYVQ
                     DFLNSQALQKIEQLEFEDLLPSDFF"
     gene            complement(3273..4148)
                     /locus_tag="PTC28_002135"
     CDS             complement(3273..4148)
                     /locus_tag="PTC28_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019164951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDK5717377.1"
                     /translation="MSLANYETNIMKLSQSNDAGLEVAIMGKQETDKAVVLLHGAIMN
                     YKIMTIFAKYIHDVKLIFINCPGRGKSTSLERQDYDLSEYAKRINEALVTIVEASHIS
                     EMSMIGYSMGGLIATKLAGYNTLPIKHLIYLNSAAKIDYKELRFSKLLYEIMKDVKPG
                     ERNEMINSIPEFVLSQGVSKKQKEGFNFSQYFAPMETMITDLMYTLRADYLADIDKIK
                     EMPKVLFLLGEDDVIFPNKDSKITHEKFEALGADVQSIIYPDVGHLDFLRVLDDSSIA
                     EQDSMTYHINQLLAE"
     gene            complement(4252..5670)
                     /locus_tag="PTC28_002136"
     CDS             complement(4252..5670)
                     /locus_tag="PTC28_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020366330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate--AMP phosphotransferase"
                     /protein_id="HDK5717378.1"
                     /translation="MMKKLDTLRLEIARLTRQTHALGIPMMIIFEGVPASGKTRLTNE
                     LLLNLDAKYTKFIATKTPSEYDLRYPFLQRFWETLPEKGHINIYFRSWYSHYVDYQVH
                     QIKYPLFKNPQILKSEIDDFETMLDNDHHEMIKFFIQINEDKRQEHIAQMKTNPLTSW
                     KAQEYEQVVAPDTYLEYMQPLLDDSWEVIDYDEREKALVQMYTHIHERLTQAISRYEQ
                     CDTHRDGRFSDTFETDLFDNKQTKISKEDYKEKLTALQKRMRELQFALYERKIPLVLV
                     YEGMDAAGKGGNIKRVRELLDPTGYEVNAVSAPTDVELSHHYLWRFAQTMPKSGHIGI
                     FDRSWYGRVLVERVEGFATEKEWSRAYDEINAFEKMWTDDGAIILKFFLSLDKDEQLK
                     RFKAREIDVDKQWKITDEDWRNRDKWDQYLEASYDMIQKTDTADAPWLVVAADHKKTA
                     RIEVLKYIIQKCEEKLWGVQQY"
BASE COUNT         1689 a         1248 c         1027 g         1765 t
ORIGIN      
        1 tctttatctc caaatgtata tgctgaatcg tcgtcggaaa agccactaga gaaaaacttt
       61 aaaaccaccg ttaaatcgaa agcagatgca aacaaagcct taaaagaatt gccaagtgat
      121 gtgaaagaca attataagga ttacgatgta gtcgacgcac tcactgacga ccttggttat
      181 acacactaca cacttcaacc tgttgtcgat ggagtgcatg cgaaagatca agaggtaaaa
      241 gtccacgttg acaaaaaagg acaagtggta ctcattaacg gggaagtaaa cgcagaaaaa
      301 gtcgatccaa caaacagcgt aagtatttct aaagatgctg ccctttcaac tgcctttaaa
      361 gctgtagata tgaaacaatc tgaagcatcc aacttagatg aagatgtcgt taaagtcaat
      421 gatgtcgaaa ttgatggtga agacaacaaa tacgtttatc atgtagaatt agtaacaatg
      481 gaacccgatg tgtcacactg ggatcttaaa gttgatgccg aaacaggaga agttgtagaa
      541 aaaacagact tagttgccca tgcagctgca acaggtactg gtcgaggtgt tcttggtgac
      601 actaaacgta ttaacatcaa ctctattgat ggtggttatt cattagaaga tgtgacaggt
      661 tctgcagtaa tggctacgta tgcttttaac cctgcgtcag gttctgcaga cttaattaca
      721 gacccagaca caaactttac agatgactac caacgcgcag gtgttgatgc gaactattac
      781 gcgaaaaaag tatatgacta ctacgcatca aaatttgatc gtcgttctta tgacaacaga
      841 gacagtgata ttatgtcaat tgtgcatgtc aataacttcc aaggtcaaga caaccgtaac
      901 aatgctgctt ggattggtga caaaatgatt tacggtgacg gcgatggcac tacatttaca
      961 gctttatctg gtgcagatga cgtcgttgct cacgaaatta cacacggtgt aacacaagag
     1021 acagctggac taatttaccg tggccaacca ggtgctttga acgaaagtat gtctgacaca
     1081 tttgcttact ttatggatcc gggcgatact ttaatcggtg aagatgtgta tacaccaaga
     1141 cgcccaggtg atgcattacg cagcatgtca aatccagaac aatttaacca accgggccat
     1201 atgagagact atgtcaacac gtcaagtgac catggtggcg tacatacgaa ctcaggcatt
     1261 ccaaataaag ctgcttacct tactgttaat aaaatcggtc aagaacaagc tgaacaaatt
     1321 tattacagag cattaacatc ttacttaact tctacttcaa attttgcaga tgccaaagcg
     1381 tcattagttc gtgctgcatt agatttatat ggtgaagatg tagcgaggca agtcgaagct
     1441 gcatgggaag aagtaggcgt ataattgctt gccttaatca tgacaactga gttacaacac
     1501 aaattatccg atgaattcca atgccacaat ccaacgagac gacgctaagg ttaaaagcga
     1561 catagaagcg ttgtgggcgg atttctcgga caatcatatc aaccctacct taaccccctt
     1621 aaacagtaag agactgggac attatgtttt cccagtctct tactacgctt ttaccttctt
     1681 gtttgttgta tccacgttct gaccgccata aaattttgcc aatccgactc actcatcatc
     1741 acaatgccat atttttctaa ctgttgttgg actgcctcac gtatagactt atccatataa
     1801 tgcattaccc cgggataata acggtcataa aattgaaaat cgcatcgttg aacaagggca
     1861 tccgcttcta atgggatatg ttggactaac ttttccgctt gcgccctacc accatatttc
     1921 aataggtaga gtgctaaaaa gtccaatcgt tcgtccgttc cccaagcgat ttctgtcggt
     1981 tgcacttgat tggcatacgc acctaatccg agacgtcccc gttcattttc aacatctata
     2041 aggagacgtt gttgtacacc gatatgcggt tgcgacgttc tcaccgcacg acacgcctgt
     2101 tcaagcatat ggggccaacg ttgacaagca attttcgtat gccccactgc agttaaccct
     2161 agcgaatgag gcaagttcac catgcctgca atcgcctgtt cagcctccat tttcgtcatg
     2221 ttcactgtca atggattcaa ctgcatccca gtcaccatat aagtggtatt gaaaaagtct
     2281 ttgtacaaaa tactgcctat catataataa tctgaaataa tcaaaggaaa atgcgtctcc
     2341 atcacattcg ttttcacgat gcgactttgc cattcatcaa acatgtcata catatgtgca
     2401 gattcccaac caaaatcgag tgacactgca ttcacatcac ctggcgtcag tgcaaatgcg
     2461 gacaaattat atacatcccc gttaaaattg agcgttttga tatcatgtcg cattattgta
     2521 ttaatattcc aaaagagcat acgcccttta caaatcagct tggcacccgt gcgttgttca
     2581 atctgtcgtt tcgttcgttg agagactttc cactccatct caatcatgtc atagtactga
     2641 ccacaaagcg ctgccaatgc ttccgctacc aaatcatcgc gcacttcgat agggtctgcc
     2701 atttcaaatc gaatcgtgcc ttcatgtctc tcatcataat aaacagcttc aatccaccct
     2761 tgctgatgtc gaatcgcttc gaacgtcact ttcacatcat gcgcctcctt tgattcttct
     2821 tttcttttat cgtaacgtaa tgatgttaat ttgatgtaaa gcgacgtttg attgtcgtat
     2881 gctcatgcta aagttggaga gcgaattgtt gctctagacg catgccacat gattgcgatt
     2941 catgtatcct taaattatca tgcgacaagg aggtttctac aatgcgtgtt cttttacgtg
     3001 ctgccattgc gatcggtgtg atcctatttg cagcacacta ttttcaagat aatgacaact
     3061 tagcggctgt cgaaaattac aaaaatgata ttgttcagtc ttcttatgta caagactttt
     3121 taaacagtca agctctgcaa aaaatagagc agttggaatt tgaagattta ttgccttctg
     3181 atttctttta actgaatatc aaactaaaaa aatgcgcatc gacactttgt tagacaaagc
     3241 tcaaatgcgc atttttgatt tcaccttact catcattctg ccaagagttg attaatgtga
     3301 taagtcatac tgtcttgttc tgcgatactc gaatcatcaa gcacacgtaa aaagtctaaa
     3361 tgccccacat ccggataaat gattgattgg acgtcagcac ctaatgcctc gaacttttca
     3421 tgggtaattt tcgagtcctt attcggaaag atcacgtcat cttcaccgag taaaaagagc
     3481 actttgggca tttctttaat tttatcaata tctgccaaat aatctgcacg taacgtgtac
     3541 attaaatctg taatcatcgt ttccattggc gcgaaatatt gagaaaagtt aaagccttct
     3601 ttctgttttt tagaaacgcc ttgagacaat acgaattcag gaatactgtt gatcatttca
     3661 tttcgctcac caggtttgac gtctttcata atttcataca ataatttaga aaaacgcaac
     3721 tctttataat cgattttggc ggcactattt aaatagatta aatgtttaat cggtagcgtg
     3781 ttgtatcccg caagttttgt cgcaattaat ccgcccatcg aataaccaat catggacatt
     3841 tctgaaatgt gagaagcctc aacaatagtg acaagcgctt cgttaattcg tttcgcatat
     3901 tcagaaaggt cataatcttg gcgttcaaga ctcgtacttt ttccgcgacc aggacagttg
     3961 ataaaaatca gtttgacatc atgaatgtat ttcgcaaaga tcgtcataat cttataattc
     4021 ataatcgcac catgaagcag tacaacagct ttatctgtct cttgtttccc catgattgcg
     4081 acttctaatc ctgcatcgtt tgactgtgat aatttcataa tatttgtttc ataattagct
     4141 agtgacatat tttttcctct atctcagttc tattctttta cgcgtgggtg atatgcctct
     4201 atattatagt agaaaaccat cacaataaaa aagggcttga gtctgatttt cttaatattg
     4261 ttgcacaccc caaagctttt cttcacattt ttgaatgatg tactttaaca cttcaatacg
     4321 cgctgtcttt ttatgatccg cagccacgac aagccacggt gcatctgcag tatctgtttt
     4381 ttgaatcata tcataactcg cttcaagata ttggtcccac ttatcacggt ttcgccaatc
     4441 ttcatccgta attttccact gtttatctac gtctatctca cgcgctttaa atcttttcaa
     4501 ttgctcgtct ttatctaaag aaaggaagaa cttcaaaata attgcgccat catccgtcca
     4561 cattttttcg aacgcgttaa tttcatcata agcgcgagac cactctttct cagtcgcaaa
     4621 accttccaca cgctcgacta acacacgacc ataccaactg cggtcaaaaa ttccaatgtg
     4681 accacttttc ggcatcgttt gtgcgaaacg ccataaataa tgatgactta actcaacatc
     4741 tgtcggcgca ctcacggcat tgacttcata accagttgga tcgagcaact cacgaacacg
     4801 tttaatgttc ccccctttac cagctgcatc cataccttca tatacgagca cgagcggaat
     4861 ttttcgttca tataaagcaa attgaagttc gcgcattcgt ttttgtaacg ctgtcaactt
     4921 ctctttatag tcctctttcg aaattttagt ttgcttatta tcaaataagt cggtttcaaa
     4981 tgtatcagaa aaacggccgt ctcgatgtgt gtcacattgt tcataacgtg aaatggcttg
     5041 tgtcaaacgc tcatgaatat gtgtgtacat ttgaacgagc gctttttcac gttcatcgta
     5101 atcaatcact tcccatgaat catccaataa cggttgcatg tactctaaat aggtatccgg
     5161 tgcaacaact tgttcatatt cttgtgcttt ccaactcgtt aatgggttcg tcttcatttg
     5221 cgcaatatgt tcttggcgct tgtcttcatt aatttgaatg aaaaacttaa tcatttcatg
     5281 gtgatcattg tctagcatcg tttcaaagtc atctatttca gactttaaaa tttgtgggtt
     5341 tttaaacaac ggatatttga tttgatgcac ttgataatcc acatagtgtg aataccaact
     5401 tctaaaataa atattaatgt gacctttttc aggtaaagtt tcccaaaagc gctgtaaaaa
     5461 tgggtacctt aaatcatact ctgatggtgt tttcgtcgcg ataaattttg tgtactttgc
     5521 atctaaattg agcaacaact cgttcgttaa tctcgttttt cccgaagcag gcaccccttc
     5581 aaaaataatc atcattggta taccgagtgc atgtgtttgt cgtgttaatc tcgcaatttc
     5641 taaacgtaac gtatccagtt ttttcatcat tctcacctcg ttactcttat tatatataag
     5701 tcgtttcaaa atgagcaatg gaatatctt
//
LOCUS       DANHPA010000122         5677 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.122, whole genome shotgun sequence.
ACCESSION   DANHPA010000122 DANHPA010000000
VERSION     DANHPA010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5677
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.122"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            3..1580
                     /locus_tag="PTC28_002137"
     CDS             3..1580
                     /locus_tag="PTC28_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding glutamate synthase family protein"
                     /protein_id="HDK5717379.1"
                     /translation="MTFLTVLQLIINVLLVGIFVIACIALIAFLIFDKRQKQHSVLRN
                     YPVLARVRYFLEHIGPEMRQYLFLNDNEDQPFSRMEYQNIVIAGKYNSRGASFGTQKN
                     YDSGYFINNAMFPTQKHQLRVDNDEWISTFIYQIKSETLFNRSEHIRAKEIEPFYLAP
                     EHYVKIGEHVAHPFYVKRLVGQSGMSYGALGKNAITALSKGLGMANTWMNTGEGGLSD
                     YHLAGDVDIIFQIGPGLFGVRDEHGQFDPDHFMAVAQHTQVKAFEIKLAQGAKTRGGH
                     IEGKKVTEEIAKIRKLQPYETVDSPNRFDFINNAYDLLKWIDELREMSQKPVGFKMVL
                     GRKDDFKQLIDAMQALQIYPDFITIDGGEGGTGATFQELQDGVGLPLFTALPIIDGLL
                     KAHQLRDKVKIFASGKLVTPDKIAIALALGADLVNVARAMMISVGCIMSRQCHKNICP
                     VGVATTDPKKEEALVVDEKQYRVTNYITSLHEGLFNIAAAVGVKSPTEIGPEHVTIKY
                     QNGEIESVHQYQLKLID"
     gene            complement(1728..2822)
                     /locus_tag="PTC28_002138"
     CDS             complement(1728..2822)
                     /locus_tag="PTC28_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HDK5717380.1"
                     /translation="MKLGARILKTGIAIILAVSIASLLPHSAGMVTVAGIAAVVAMQP
                     SVYRTFKTIVDQFQGNVIGALLAVAMVTIFGNNVIIMGATVILLIALLFKMKIAHVAT
                     LATVTALVIMGQHDGSFYISAFYRFSLVMIGVISSFIVNLTFLPPKFETKIYYNSLNI
                     STDIFKWFNLVLNDATEFNYVKQDLENLRQRIVKLEQLLEFYKEERVYTKKQVFAQTR
                     KKILFKEIVLSTRDAYDVLRRMNRYQNDLVHLNHALLLQIKLEIDELTQFHEQILISI
                     TKKAKFDVTLDQRFVPNPLKKEVITAFQEEVIVDPEPENFSYANIMHIISALEEYRYN
                     LEHLDRLRVSYFKYHNTDPDIDIIEEDFDL"
     gene            complement(2916..4202)
                     /locus_tag="PTC28_002139"
     CDS             complement(2916..4202)
                     /locus_tag="PTC28_002139"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500497.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HDK5717381.1"
                     /translation="MNFNRSEALQEQSNEYILGGVNSPSRSYKAVGGGAPVVMKSGKG
                     AYLYDVDGNEYIDYLQAYGPIITGHAHPHITEAIQEQAALGVLYGTPTELEIAFARKL
                     RAAIPSLEKMRFVNSGTEAVMTTIRVARAYTNRDKIIKFAGCYHGHSDLVLVAAGSGP
                     SQLGSPDSAGVPKSVAQEVITVPFNDIESFKEAMKHWGNQVAGVLVEPIVGNFGMVEP
                     QPGFLEEVNRVTHEYGGLVIYDEVITAFRFHYGAAQDLLGVYPDLTAFGKIVGGGLPI
                     GGYGGRQDIMEQVAPLGPAYQAGTMAGNPLSMKAGIALLEVLEQPGVYEKLNQLGKKL
                     EAGLQAAIDKYQVKATINRVYGALTVYFTDEKVTHYEQADASDGEQFAKFFKLMLHQG
                     INLAPSKYEAWFLTTEHTEADIEKTIAAADYAFSQL"
     gene            4285..4743
                     /gene="bcp"
                     /locus_tag="PTC28_002140"
     CDS             4285..4743
                     /gene="bcp"
                     /locus_tag="PTC28_002140"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HDK5717382.1"
                     /translation="MLKKGDTFPDFQLENQNGEQISKASLKGQKVILYFYPRDNTPTC
                     TTEACDFRDKIAYFNDLNVQVYGVSGDSKRKHQNFIEKHQLNFDLLVDEDFQLSEAVG
                     VYQLKKSFGKESMGIVRTTFVLDEEGKIIDVIEKVKVKEQMAQLKEILEG"
     gene            4750..>5677
                     /locus_tag="PTC28_002141"
     CDS             4750..>5677
                     /locus_tag="PTC28_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HDK5717383.1"
                     /translation="MLVVSLMRLDDQETRLQEAFPHVDFKFYKHPSQLPEEVHQQMDV
                     LISYHPEVDAAFIENAPNLKWIAWYATGVNRLPFETLKKREIQLTNAGGVHAQQLTEF
                     LFAYILDDYKELKSIYEEQQARIYNHKRVTPSVKGQHILFLGTGKIPQRASQIAKILG
                     MKTIGLNTTGHAAEYFDETYPISERHHIYKEVDIVVNLLPETTDTRYLLTVEDFKAMN
                     QHTLFVNLGRGTIAQESVIVDALKNKSIRKAYLDVFEQEPLESDSELYQLDNVFLTPH
                     ISGSHVDNKKLATDIFSNNLKSFLSNGNLIENK"
BASE COUNT         1823 a         1015 c         1119 g         1720 t
ORIGIN      
        1 caatgacttt tttaactgta cttcaattaa ttatcaatgt tttattagta ggtatattcg
       61 tcattgcatg tatcgcattg attgcgtttt taatttttga taaacgacaa aagcagcaca
      121 gtgtattacg taattatcct gtgctcgcac gtgtgagata ctttttagaa catattggac
      181 ctgaaatgcg ccaatattta tttttaaatg acaatgaaga ccaacctttt tcaagaatgg
      241 aatatcaaaa tattgttatt gcgggcaagt acaactcaag aggggcgagt tttgggacgc
      301 agaaaaatta cgacagcggt tattttatta ataatgcaat gtttccaacg caaaagcatc
      361 agttaagggt cgacaatgat gaatggattt caacgttcat ttatcaaatt aaaagcgaaa
      421 cattgtttaa tcgttcagag catattcgtg cgaaagaaat tgaacctttt tatttggcgc
      481 ctgaacatta tgtcaaaatc ggggagcatg tcgcgcaccc attttatgtt aaacgtttag
      541 ttggacagtc gggcatgagt tacggtgctc tgggtaaaaa tgcgattacg gcactttcga
      601 aaggattagg gatggcgaac acatggatga ataccggtga aggcggctta tctgattatc
      661 atcttgccgg tgatgttgat attattttcc aaatcgggcc tggcttattt ggcgttaggg
      721 acgagcacgg acaattcgac cctgatcatt tcatggcagt tgcacaacat acccaagtta
      781 aagcgtttga aatcaagttg gcacaaggcg ctaaaacacg tggcggtcat attgaaggta
      841 aaaaagtgac agaagaaatt gccaaaattc gtaagcttca accttatgaa actgtcgact
      901 cgccgaaccg ttttgacttt attaataacg cgtatgattt gttgaaatgg attgatgagt
      961 tgcgagaaat gagtcaaaaa ccagtgggct ttaaaatggt acttggtaga aaagacgact
     1021 ttaaacaatt gattgacgct atgcaagcgt tacagattta tccagacttt attacgattg
     1081 atggtggtga aggtgggaca ggtgcaacgt tccaggaatt gcaagatggc gtcggtttac
     1141 cgttatttac agcgttacct atcattgatg gtttactcaa agcgcatcag ttaagagaca
     1201 aggtgaaaat ttttgcatct ggaaaactgg tcacgcctga taaaattgcc atcgcgttag
     1261 cattaggggc tgacctcgtg aatgtagcca gagcgatgat gattagtgta ggttgtatca
     1321 tgagtcgtca atgccataaa aatatttgtc cagtcggtgt tgcaacgacg gatcctaaaa
     1381 aagaagaagc gcttgtcgtc gatgaaaaac aatatcgtgt aacgaactat attacgagct
     1441 tgcatgaagg gttgtttaat attgcggcag cggttggtgt gaaaagtcca actgaaatcg
     1501 gtcctgaaca tgtgacgatt aaatatcaga atggtgaaat tgaatcggtt catcaatatc
     1561 aattaaagtt gattgattaa atggggaaat ggggtggtac aaaaaatttt tgatgcgcac
     1621 cctcattaaa tgtgatagag gcagaaaaag ttgatctact agccttatca atacagaaaa
     1681 agctcgaaca agatgacgtt aaatcatttt gctcgagctt ttatttgtta taaatcaaaa
     1741 tcttcttcaa tgatatcgat atcggggtct gtgttatggt atttaaaata actgacacgt
     1801 aaacgatcta agtgttctaa attgtagcga tattcttcta aagctgaaat gatatgcata
     1861 atgttggcat aagaaaagtt ttcaggttct gggtctacta tgacctcttc ttgaaaggct
     1921 gtgatgactt cttttttcaa tgggttcggg acaaaacgtt gatcgagtgt cacgtcgaac
     1981 tttgcttttt tcgttatact aattaaaatt tgttcgtgaa attgtgtcag ctcatcaatt
     2041 tctaatttga tttgtaataa taatgcatga tttaaatgca ccaaatcatt ttgatatcga
     2101 ttcattcgtc tgagcacgtc atacgcatca cgtgtcgaca agacgatttc tttaaataag
     2161 attttcttac gtgtttgtgc gaagacttgt ttctttgtat agacacgttc ttctttataa
     2221 aattcaagta actgctcaag tttgacaata cgttgacgta aattttctaa atcttgcttc
     2281 acataattaa attctgtcgc atcatttaac actaaattaa accacttaaa aatatcggtc
     2341 gaaatgttta atgagttgta ataaatcttc gtctcaaact ttggtggtaa aaatgtgaga
     2401 ttaacgatga atgagctgat gaccccaatc atcacaagag aaaatcggta aaaggctgag
     2461 atgtaaaaag agccgtcatg ttgtcccata ataaccagtg cagtcactgt cgctaacgtt
     2521 gcaacatgtg cgattttcat tttaaagagt aatgcgatta acaaaatcac tgtcgcaccc
     2581 ataataatga cattgttgcc gaaaatggtc accatagcta cagcgagaag ggcaccaatg
     2641 acattacctt ggaattgatc gacaatcgtt ttaaatgtcc gatagacact aggctgcatg
     2701 gcaacgaccg ctgcaatgcc tgcgacggtc accatcccag cactatgagg taacagtgag
     2761 gcaatcgaaa ccgcaagtat aatggcgata cctgttttta aaattctagc tcccagtttc
     2821 aaaacatcgc gctcctttga ttaaattaaa gcctgagtcg tgcataggtt taatcatgtt
     2881 atacactgtt acatcgcaaa tttcaatagc gaagtttaca attggctaaa tgcataatcc
     2941 gcagcagcaa ttgttttttc aatatctgct tctgtatgtt cagttgttaa aaaccatgct
     3001 tcatattttg atggtgctaa gttgatgcct tgatgtaaca tcagtttgaa aaatttcgca
     3061 aattgttcgc catcagacgc atcagcttgt tcgtaatgtg tcactttttc atctgtaaag
     3121 tataccgtta acgcaccata tacacggttg atagttgctt tgacttgata tttatcaata
     3181 gcagcttgta acccggcttc taatttttta ccgagttgat ttaacttttc atatacacct
     3241 ggttgttcta atacttctaa caacgcaata cctgctttca ttgataatgg gttacctgcc
     3301 attgtccctg cttgataggc gggtccgagt ggtgcgactt gttccataat atcttggcga
     3361 ccaccgtaac caccgattgg aaggccacct cctacaattt taccgaaagc agttaaatca
     3421 ggataaacgc ccaataaatc ttgtgcagca ccataatgaa aacggaatgc agtaatgacc
     3481 tcatcgtaaa taactaagcc accatattca tgtgtcacac ggttcacttc ttctaaaaat
     3541 ccaggttgag gttcgaccat gccaaagtta ccgacaatag gttcaactag cacgccagcc
     3601 acttgattgc cccagtgttt cattgcttct ttaaaagact caatatcgtt aaatggcaca
     3661 gtgattactt cttgggctac acttttcggc acacccgctg aatcaggaga accaagttgt
     3721 gatggaccac ttcctgcagc gacaagcact aagtcagagt ggccgtgata acagccagca
     3781 aatttgatga ttttatctct atttgtataa gcacgtgcaa cacgaatcgt agtcatcaca
     3841 gcttctgttc ctgaattgac aaagcgcatt ttttctaatg aaggaatggc tgctcgtaat
     3901 tttcgggcaa atgcaatttc taattctgta ggtgtaccgt ataatacacc aagggcagcc
     3961 tgttcttgga tggcttcagt aatatgcggg tgggcatgtc cagtaataat aggaccatat
     4021 gcttgtaagt agtcgatata ttcattgcca tcgacgtcgt ataaataagc acctttacca
     4081 gacttcatca caactggtgc gccaccaccg acagctttat atgaacgaga cggtgaattg
     4141 acacccccta aaatatattc attggattgt tcttgtaatg cttcacttcg attaaaattc
     4201 ataaatcaac caacctcttt taatttaata tttttcccta ttatcgtatc ataaaatgag
     4261 aagatattag aaagaagggt tgttatgtta aaaaaaggtg atacatttcc agacttccaa
     4321 ttagaaaatc aaaatggcga gcaaatttca aaagcttcat taaaaggaca aaaagtaatt
     4381 ctctattttt acccacgaga taacacacct acatgtacaa cagaagcatg tgacttcaga
     4441 gataaaatcg catactttaa tgatttaaat gtgcaagttt acggtgtaag cggcgattca
     4501 aaacgcaaac atcaaaattt catagagaaa catcagttaa attttgattt gttggtagat
     4561 gaagattttc aactttcaga agcggttggt gtataccaat tgaagaaatc ttttggtaaa
     4621 gaatcgatgg gcatcgtacg aacaactttt gtactagatg aagaagggaa aattatagat
     4681 gttattgaaa aagtaaaagt caaagaacaa atggcacaac ttaaagaaat cttggaaggg
     4741 tgattctaca tgttagtcgt tagcttgatg cgtttagatg atcaagaaac aagattacaa
     4801 gaagcatttc ctcatgttga ctttaaattt tataagcatc cctctcaact gcctgaagaa
     4861 gtgcaccaac aaatggatgt gttgatttca tatcatccag aagttgatgc agcttttatt
     4921 gaaaacgcac caaatctaaa atggatagct tggtatgcga caggggtcaa tcgtttgcct
     4981 tttgaaacgc tcaagaaaag agagattcaa ttgactaatg cagggggtgt acatgcacaa
     5041 caacttacgg aatttctgtt tgcgtacata ttagatgact acaaagaact caaatcaatt
     5101 tatgaagaac aacaagcacg catttataat cataaacgtg ttacaccatc cgttaaaggt
     5161 cagcatattt tatttttagg taccggaaaa attcctcaac gtgcatccca aatagcaaaa
     5221 atattgggga tgaaaacgat agggttaaat acaacaggtc atgcggcaga atattttgac
     5281 gagacgtatc ctatttcaga acgacaccat atttataaag aagtggatat cgttgtgaat
     5341 ttgttaccgg aaacaacaga tacacgatat ttattgaccg tagaagattt taaagcgatg
     5401 aatcaacata cattatttgt taatttagga cgaggtacaa ttgcacaaga atcagttatt
     5461 gttgatgcct taaaaaacaa atcgattcgt aaagcatatt tagatgtatt tgaacaggag
     5521 ccactagaat ccgattcaga actctaccag ttggataatg tctttttaac accacatatt
     5581 tcaggcagtc acgtagataa caaaaaatta gcaactgata ttttttctaa caatttaaaa
     5641 tcttttctca gtaatggtaa tttgattgag aataagg
//
LOCUS       DANHPA010000123         5582 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.123, whole genome shotgun sequence.
ACCESSION   DANHPA010000123 DANHPA010000000
VERSION     DANHPA010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5582)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5582)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5582
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.123"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..721
                     /locus_tag="PTC28_002142"
     CDS             <1..721
                     /locus_tag="PTC28_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDK5717384.1"
                     /translation="AILIIATTLTIEREINYKRKKQELDDYYKYTVQIEKINNKMRKF
                     RHDYTNILLTMSEYLREDDLEGLKQYYHEHISPLKSEFESNTMRLNGIENLKVREIKG
                     LITTKILQAQENNIEITVEVADEITQIDMDAIQLSRVLGIIMDNAIEASNTIEDPIIQ
                     IAFIKTDASVMIIIMNKAPKDMPKLHTLFQDGFSTKGNNRGIGLTTLKEIIDQTDNVF
                     LDTTIENHYFIQKLEIMNDYE"
     gene            735..1451
                     /locus_tag="PTC28_002143"
     CDS             735..1451
                     /locus_tag="PTC28_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000688500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDK5717385.1"
                     /translation="MKILICEDDPKQRERMVSIIENYIMIEEKPMEIELATNDPYAIL
                     ETSKNMTDIGCYFLDIQLESDINGIKLGSEIRKHDPVGNIIFVTSHSELTYLTFVYKV
                     AAMDFIFKDDPEELRTRIIDCLETALKRLDLLTKDHTVETLELKRGTSSVYVNYDDVM
                     FFESSPKSHRLIAHLDNRQIEFYGNLKELAQLDDRFFRCHNSYVLNRRNITSVDTKER
                     IAYFKNEEFCYVSVRNLKKI"
     gene            complement(1511..2455)
                     /locus_tag="PTC28_002144"
     CDS             complement(1511..2455)
                     /locus_tag="PTC28_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HDK5717386.1"
                     /translation="MKRFYAIGEALIDFIPTQRETPLKDVTGFEPQVGGAPCNVAAAV
                     QKLGGNSHLITQVGEDAFGDKIIETLQAVEVDTSHILTTKEANTALAFVSLSNDGERD
                     FSFYRKPSADMLYEAENIDTIELQQGDLVHFCSVALVDSPMKRAHVTLLDKSEQVGAT
                     VVFDPNVRLPLWDDHDVYYETLQAFLPRAHVVKVSDEELSFVTRHEDEAEALKSLFVG
                     NVQAVIYTKGSRGASLIFEDGSTIEVPTPPAQVVDSTGAGDAFIGAISAKLCQSEQQP
                     IETLRQHGHDILKFAHQVSGRVVSQYGAISSLPTLEEL"
     gene            complement(2459..3943)
                     /locus_tag="PTC28_002145"
     CDS             complement(2459..3943)
                     /locus_tag="PTC28_002145"
                     /EC_number="3.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sucrose-6-phosphate hydrolase"
                     /protein_id="HDK5717387.1"
                     /translation="MEQWSREKRYRKYEEATHEEMELLTAKVNRSPFRQTYHIQPPTG
                     LLNDPNGLIFFNGQYYIAHQWFPLGAVHGLKYWRLLTSNNLVQFEDRGVVLRPDQTFD
                     SHGVYSGSAFSFDQKLYYMYTGNHRDNEWNRHSSQIVAEVQANGSVRKLLPPAIPAPP
                     QGYTQHFRDPKVFEKDGKLYALLGAQRENETGCAVLYEAERTEGPWQFKGEIQTQLED
                     FGYMWECPDYFQIHGKDILLFCPQGIESEGDAYQNIYQSGYIMGTLNFDTLEFDHGPF
                     IELDHGFDFYAPQTMTDEAGRRVLIGWMGLPDTEYPTDDDGWVHCLTLPRTLTIEDGK
                     LKQKPHMHLRKLRKNEEVALGYANKFIKQLHPYEGVQYELVVDILENEASAFELQLRA
                     SRNESTTIRYDTTTRQVSLERFDSGALPYPVEGTMRVTQLHTDLKQLRIFVDTSSIEI
                     FCNEGERVLTSRIFPKATSNKFKVVTDSGQIYLKMTKYDIVEGG"
     gene            complement(3999..4946)
                     /locus_tag="PTC28_002146"
     CDS             complement(3999..4946)
                     /locus_tag="PTC28_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDK5717388.1"
                     /translation="MNIQDIANLAGVSKSTVSRYLNQGSISLKTKRKIQHVIDTYGYE
                     PNQFAQSLRAQKSMMIGIIFPRMYSHAVSQTVKGIKAKCDAFGYQMLLNLTERHVEQE
                     LDALKSFKRSKVDGILFMATTVTDAHMAVIQEIDKPVIIIGQAHASLSSVYHNDYQAG
                     QLMGQEIVAQGKQHVIYASIQEDDVAVGEQRFRGLIEVLTANQVTYETLMTSFDYETA
                     LQSIKGQLTQQPSVAYVGATDTIALALYQALMHDHMTEPPWIAGFGGDPMTQIVHPMI
                     FTLPYQYEAAGRIAFEQLQLQMEQPDLIQSCQLDVNSKL"
BASE COUNT         1711 a         1107 c         1003 g         1761 t
ORIGIN      
        1 cgctatatta attatagcaa ccactttaac aattgaacgt gaaatcaatt ataaacggaa
       61 aaagcaagaa ttagacgatt attataaata tacagtacaa attgaaaaaa ttaacaacaa
      121 aatgcgtaaa ttccgacatg actatacgaa tattttatta acgatgtccg aatatttacg
      181 tgaagatgat ttagaaggtt tgaagcaata ttaccatgaa catattagtc ctttaaaaag
      241 cgaatttgaa tccaatacga tgcgactgaa tggtattgag aatctaaaag tccgtgaaat
      301 taaaggctta attacgacta aaattttaca agcgcaagaa aataatattg aaatcactgt
      361 tgaagtggcg gatgaaatca cgcaaattga tatggatgcg attcaactca gccgtgtgtt
      421 aggtattatt atggataatg cgatagaagc ttccaacacg atagaggatc ctatcattca
      481 aatcgcattt attaagacgg atgcgtccgt aatgattatt attatgaaca aagcgccaaa
      541 agatatgcct aagttacata ccttgttcca ggatgggttt tcaactaaag gaaacaatcg
      601 aggtatagga ttaacaacat taaaagagat tattgatcaa acggacaatg tattccttga
      661 tacgacgatc gaaaaccatt attttattca aaaactagag attatgaacg attacgaata
      721 aggatgtgtg tatcatgaaa attttgattt gtgaggatga tcctaaacaa cgtgaacgca
      781 tggtgtccat tattgaaaat tatattatga ttgaagagaa accgatggaa attgagcttg
      841 ctaccaatga cccttatgct atcttagaaa cttctaaaaa catgactgat attggctgct
      901 actttttaga tattcaatta gagtctgata ttaacgggat taaattaggg agcgaaattc
      961 gtaagcacga tcctgttggg aatattattt ttgtgacgag tcatagtgag ctgacgtact
     1021 tgacttttgt ctataaagtg gctgccatgg attttatttt taaagatgat cctgaagaat
     1081 taaggacacg cattatcgat tgtttagaaa cagcattaaa acggcttgat ttattaacaa
     1141 aagatcatac tgttgaaact ttggaactca aacgtggaac cagctcggtt tacgtgaact
     1201 atgacgacgt gatgtttttc gagtcctcac cgaagtcaca tcgtttaatc gcgcatttag
     1261 acaatcgtca aatcgaattt tacggcaatt tgaaagagtt agctcaactc gatgatcgat
     1321 tcttcagatg ccacaacagt tatgtgctaa acagaagaaa tattacaagt gtcgatacga
     1381 aagaacggat tgcttatttc aaaaatgaag aattttgtta cgtgtcggtg cgtaatttga
     1441 agaaaattta aaagctatat atcgcattaa aaagccaatt tcccggatag gtgggagatt
     1501 ggctttttaa ttaaagttct tctaatgttg gtaagcttga aatagcgcca tattgggaca
     1561 cgacgcgacc tgaaacttga tgtgcaaatt ttaaaatatc atgcccgtgt tggcgtaatg
     1621 tctcaattgg ttgttgctcg gattgacata atttcgcact gattgcaccg ataaatgcat
     1681 cgcctgctcc tgtcgaatcc accacttgcg ctggcggtgt gggcacttca attgttgagc
     1741 catcttcgaa aattaaagat gctccgcgac tgccttttgt gtaaatgacc gcttgcacgt
     1801 tgccgacaaa cagtgatttt aacgcttccg cttcatcctc atgtcgtgta acaaatgaga
     1861 gttcttcatc tgaaacttta acaacatgtg cacgtggtaa aaatgcttgc aatgtctcgt
     1921 aataaacatc atggtcatcc cataaaggta agcgcacatt cggatcaaac acaacggtcg
     1981 caccgacttg ttccgactta tccagtaatg tcacatgtgc gcgtttcata ggactgtcaa
     2041 ctaatgctac cgaacaaaaa tgtactaaat caccttgttg caactcaatt gtgtcaatat
     2101 tttcagcttc atatagcatg tctgcactcg gcttccggta aaatgaaaag tctcgttctc
     2161 catcattaga taaactgaca aatgcaagtg ctgtattcgc ttcttttgtc gttaaaatat
     2221 gtgaggtgtc tacttcaacc gcttgtaacg tctcgatgat tttgtcacca aaagcgtctt
     2281 cacccacttg tgtaatcaaa tgactgttgc cacctaattt ttgaacagca gcagccacat
     2341 tacacggtgc accaccgact tgcggttcaa accctgtcac atctttcaat ggcgtctctc
     2401 tttgtgtagg aataaaatcg atgagcgctt cacctattgc ataaaaacgt ttcattcatt
     2461 atcctccttc cacaatatcg tatttagtca ttttcaaata aatttgaccg gaatctgtga
     2521 cgactttaaa cttatttgat gtcgctttag ggaaaatgcg tgacgtcaac actcgttccc
     2581 cttcattaca aaagatttca atgcttgatg tatccacgaa aatacgtaat tgtttcaaat
     2641 ccgtatgtaa ttgcgtcacc ctcatcgttc cttcaactgg atacggtaat gccccactat
     2701 caaagcgctc cagtgaaacc tgacgtgtcg ttgtatcata ccgaatcgtt gtggattcat
     2761 tgcgtgatgc acggagttgt aattcaaacg cagaagcctc attttctaaa atatcaacga
     2821 ccagctcata ttgcactcct tcataaggat ggagttgttt aataaatttg ttcgcataac
     2881 cgagcgcaac ttcttcattt ttacgtaact ttcttaaatg catatgcggt ttttgtttta
     2941 atttgccgtc ttcaatcgtt aatgttcttg gcaaagttaa acagtgtacc caaccgtcat
     3001 catctgtcgg atattcggtg tcaggtagac ccatccaacc aattaacaca cgtcgccccg
     3061 cttcatcagt catcgtttga ggggcataaa aatcaaaccc gtggtcaagt tcgataaacg
     3121 gaccatgatc aaattctaat gtatcaaaat ttaacgttcc cattatgtaa ccgctttggt
     3181 aaatgttttg atacgcatcg ccttcagatt ctatgccttg tggacagaat agcaaaatat
     3241 cttttccatg aatttgaaaa taatctggac actcccacat ataaccaaaa tcttctaatt
     3301 gggtttgaat ttcaccttta aactgccacg gtccttcagt gcgttcagct tcgtataata
     3361 cggcacaccc tgtttcattc tcacgttgtg ctcctagcaa tgcatacagt ttcccatctt
     3421 tctcaaacac tttaggatcg cgaaagtgtt gtgtataccc ttgaggaggt gccggaatgg
     3481 ctggaggtaa tagtttacgg actgacccat ttgcttgcac ttctgctacg atttgactac
     3541 tgtgacggtt ccactcattg tcacgatgat tgcctgtgta catataatac aatttttgat
     3601 caaacgaaaa tgcactccca ctgtagacgc cgtgactatc aaacgtttga tccgggcgta
     3661 atacgacacc acgatcttca aactgtacga gattgttgct tgtgagtaac cgccaatatt
     3721 ttaaaccatg tacggcacct agtggaaacc attgatgtgc gatataatat tgaccattaa
     3781 aaaagatcaa accgtttgga tcatttaata atcctgttgg gggctgaata tggtaggttt
     3841 gtcgaaatgg agagcggttc actttggccg ttaataactc catttcctca tgtgttgctt
     3901 cttcatactt acgataacgc ttttctctac tccattgttc catcatatac ctccttttaa
     3961 cacattggta acggttccac ctcttttgag ataaaccctc ataatttgga attcacgtca
     4021 agttgacaac tttgaataag gtccggctgt tccatttgaa gctgtaattg ttcaaatgcg
     4081 atacgtcctg ccgcttcata ttgataaggt agggtaaaaa tcattggatg aacaatttgt
     4141 gtcataggat ctccgccaaa accagcaatc cacggcggtt cggtcatatg gtcgtgcatc
     4201 aacgcttgat agagcgccaa agcaatcgta tctgtcgcac cgacgtacgc cacagatggt
     4261 tgttgggtaa gctgaccttt aattgattgc agtgcggttt cataatcaaa cgatgtcatc
     4321 aatgtttcat atgtaacctg atttgcggtt aacacttcaa tcaaacctcg aaaacgttgc
     4381 tcaccgaccg cgacgtcatc ttcttgaata ctcgcataaa tgacatgttg cttcccttgt
     4441 gccacaattt cttgtcccat tagttgacca gcttgataat cattgtggta aaccgagctt
     4501 aacgatgcat gtgcttggcc aatgatgatg actggtttat caatttcttg aatgacagcc
     4561 atatgtgcat ctgtcacagt agtcgccata aataaaatgc catccacttt acttctttta
     4621 aaagatttca gcgcatctag ttcctgttcc acatgacgct cagttaaatt taacaacatt
     4681 tgatagccaa atgcgtcaca tttcgcttta atccctttaa cggtttgtga cacagcatga
     4741 gaatacattc tcgggaaaat aataccaatc atcatacttt tttgtgctct taaactttga
     4801 gcaaattggt tcggttcata accgtatgta tcaatgacgt gttgaatttt tcgctttgtt
     4861 tttaaactaa tcgatccttg atttaaatac cttgaaactg tacttttaga aacgcccgct
     4921 aaattggcga tatcctgtat attcattgtt catcacctca cagtctcaat agctatttta
     4981 tcataaaacc cctcacgatt actgtataaa atacgatatg agatgaaaaa aacctgattt
     5041 tacacagtgg atactggtgt ctatccatga gaaaattctc ttcgtttctt ttgtcattta
     5101 atactttcaa ttcattatct acgcataaac ttgaagcccc tttacaaaaa atcattgaga
     5161 aatgggtgta tcattacaaa agataatata tcaaaataaa attaatatat cgaatttgtc
     5221 agaaaatttg gtaaattaaa ttaataaaaa aatagattct ctaatagata tagttgagtg
     5281 cgataaatat ggtcacactc ttaattggtt taggtccact tctagattgg atattttcct
     5341 acaatcgcat caaaatttgg agataaacct gtcaaacaga acatcgtcgc taccgtttga
     5401 acactgattt ttgtgatttt cttcttccca tttactggtt gtagttttct gacaataacc
     5461 gaaactcatt tcttaactca acataaaact ttaaaaagaa atggtattga ctattattag
     5521 ttgaaaatta atttttgaca ccgcaactgt aactgtattt ttaagtaatc actgacagta
     5581 tg
//
LOCUS       DANHPA010000124         5554 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.124, whole genome shotgun sequence.
ACCESSION   DANHPA010000124 DANHPA010000000
VERSION     DANHPA010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5554
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.124"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(1659..1979)
                     /gene="rbsD"
                     /locus_tag="PTC28_002147"
     CDS             complement(1659..1979)
                     /gene="rbsD"
                     /locus_tag="PTC28_002147"
                     /EC_number="5.4.99.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribose pyranase"
                     /protein_id="HDK5717389.1"
                     /translation="MVIADCGLSIPEGVKRIDIALKKGTPSFQEVYEALMYHMVVEQA
                     IVAREMVEENEALYQKVKNDFPTLEMVSHEKFKKQTRHAKAIIRTDEATPYANIILKS
                     GVIF"
     gene            complement(2041..2925)
                     /gene="rbsK"
                     /locus_tag="PTC28_002148"
     CDS             complement(2041..2925)
                     /gene="rbsK"
                     /locus_tag="PTC28_002148"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HDK5717390.1"
                     /translation="MRQIYVIGSMSMDLVVSSQVVPEQGETVLGEDFFTTPGGKGANQ
                     AVAAARLGEQVHMIGCVGEDTFGEQIQQNFKDNGVQIDGIEVIEGESSGTAHITLSQQ
                     DNRIIVVPSANGYVTPERIQPYLARMAAGDIVLIQQEIPAETVAHVIDYCAQHDIVSI
                     LNPAPYREVPAKVIEQAHYITPNETESAHLFKGEAIEEVAAQYPNKLIVTLGSEGAMY
                     HNGEQIVKVPSFKRTVKDTTGAGDTFNGALAVGLQKDYSLTKAIEFANLAASYSVTGM
                     GAQGGMPYFADLERELGV"
     gene            complement(2925..3896)
                     /locus_tag="PTC28_002149"
     CDS             complement(2925..3896)
                     /locus_tag="PTC28_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDK5717391.1"
                     /translation="MATIKEVAALAGVSVATVSRAMNRSGYVKAATKAKIEAAIQQLD
                     YAPNEVARTLNMKQSKVIGLLLPDMSNPFFTQVARGVEDTAMAHGYHIMIGNGAMNEH
                     KELNYLATFKANHCSGIIASQLSTEHAFEQLQSDERPHVLIDRVTKDDFCVEANHQQG
                     GRLQAEVVLRGEGQRVLIVYQDQSYQSFQQRYETARKVLQEAGCTVFEISDLAMTEAK
                     FLSLVHENDIDSVICSHDVAAFRVLKWLNYDGQRIPEDVQVVGYDDMPLAKWLVPGLT
                     TVRQPAYTLGERAAQKLIAQIEGQSNIERKTLLDVTLIERETTRRNQ"
     gene            4166..4681
                     /locus_tag="PTC28_002150"
     CDS             4166..4681
                     /locus_tag="PTC28_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin family protein"
                     /protein_id="HDK5717392.1"
                     /translation="MAEFTLGDQMPNFQLNATDGTTFDFHQFQQTHPNQWYFVINFRG
                     SWCPVCMEELDSLIKNVGYFEKKNIQIILTSNDTAENLRQMVEEKQVPYPVLVDENND
                     FANTYGVYSHPDDSIYDDHGTHNEPAYFLVSEDNRLLYQQKQTNPFGRPSMIELRKII
                     QYIQKSYKKAE"
     gene            complement(5020..5471)
                     /locus_tag="PTC28_002151"
                     /pseudo
     CDS             complement(5020..5471)
                     /locus_tag="PTC28_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220171.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topology modulation protein FlaR"
BASE COUNT         1606 a         1227 c          957 g         1764 t
ORIGIN      
        1 atgcttataa acacttgtct gtacagatat ttatagatta tttttaggct agcctaactt
       61 ttttgtttac aaaacctata tgatgtgtta tcttaaaatt gttcaattcg ataaacgtat
      121 atcacatgtc attctctgta atggctttgc tttttcatag cgattcatct ggtctcaaag
      181 gcataacttg agccctatgc gtacactgtg atgaccgtat gaacgatatg aaggcttctc
      241 tgatattttc gttttatcat tgaacaattc aattaaggca acgtcgcatt agccctgcac
      301 aacttgtctt aattgatggt ggaacgtaat gttacttgat atttgttatt gtgcgcacac
      361 tcatatctat gttttacatt acaaagtaac aatgctgata cctatctcaa cattgttcgc
      421 atttcaatca aatccgttac ttgaagccaa gggtcaagaa tcatacacat atcagtcatt
      481 cctaaaaaga ctacagtaag caagcattca tatttccctt aataagtaaa agccaagttg
      541 gacaagctca gcatagttga tagcagattg tcacaacgga aatgtttatc ctccataact
      601 aaagtaagat tgaacagcag gtatgaatcc tattaaacag ttgaaggttc gcctatgtta
      661 tccctctact acatagagtg aaacgatatc gactgtaaca tgttaatata tgccatgata
      721 taaattagcc cttgatattg tgacatgtat tgggtagtta cgttataccc ctaaaattgc
      781 gtaacacctc caaaattaca acttgattct atagttaagg ttgttggtat agtgatacac
      841 tccctttcat ctatagcaac ataccgacat cttgtatcat ttttacaact ctagataatt
      901 aaaaaaatca tcttaaaatc ttaaaacctt tagacccctg atgtgcttca tctcacatca
      961 ggggcatttt ttgcggtgtg gtgggtgtcg tgttggtttt gggcattggg tgggttgagc
     1021 attgggtgac acagacgttg ttttaaaccg ttggctacgc ccaccatgct ctctttccta
     1081 gaggctgacc cttcaaccaa attcggcttg attgaaatga acacctggtt gatgccgaat
     1141 tggattttgg gagcagtaca gaaatctcat gtgcaacaaa gatttcgtcg tactgccccc
     1201 gcaaggctga ctagacttct caaaagcgag cgcattgaga agtcagacag ctactgcgat
     1261 aaacaggaac tactattaaa gagtagaaat catatttaga tatttatttt atccctcagg
     1321 agtgtcgcat ggttggttgc ttgcctcggg acttttctct ttgtggaaca tttgctcatt
     1381 tcaccctctg ttacattcag tcaccctact tgccgtgagt ggagatgaag gatagcaaag
     1441 ccccccgttt taatattctt ccctttaaat tgtgagacat cataaaaaca gacgtatgtg
     1501 agatttctcc caaacatacg tctacttttg ataaatatgt gatttaatta ctcattgatt
     1561 tgtttcaacg gtgactcatt gtagtcgctc attcgtatca aggtgattca tgagctcttg
     1621 aaattttgat ggtctaggta gggcatcgtt gtcacccctt agaaaatcac accacttttt
     1681 aaaataatat tggcatatgg tgttgcctca tctgttcgaa taattgcttt cgcatggcgt
     1741 gtttgttttt taaatttttc atgtgaaacc atttcaagcg ttggaaaatc atttttaact
     1801 ttttgataca acgcttcatt ttcctctacc atttctcgag ctacaatggc ttgttccacg
     1861 accatgtgat acataagcgc ttcatacact tcttgaaatg atggcgtgcc ttttttcaat
     1921 gcgatatcaa tacgtttgac cccttctgga attgagagtc cacaatccgc aataacgatt
     1981 tcatctgtgt gacctcacct gtttaataca cgcgaaattt cactgtttaa tgtgccaaat
     2041 ctatacacct aattcacgtt ccaaatccgc aaaatacggc atgccgcctt gtgcccccat
     2101 acctgttact gaataacttg ctgctaagtt ggcaaattca attgctttag ttaacgaata
     2161 atctttttgt aaaccgactg ccaaggcgcc gttaaacgta tctcctgcac ctgtcgtatc
     2221 tttgaccgtt cttttgaagc ttgggacttt aacgatttgt tcgccgttat gatacattgc
     2281 cccctccgaa ccaagtgtca caatgagttt atttggatat tgtgccgcga cctcttcaat
     2341 ggcctcacct ttaaatagat gcgcgctttc cgtttcatta ggcgtaatat aatgcgcttg
     2401 ttcgatgact tttgcaggta cttcacgata aggtgcggga tttaaaatag atacaatatc
     2461 gtgttgcgca cagtaatcta tcacatgtgc gactgtttct gctggaattt cttgttgaat
     2521 cagcacaata tctcccgctg ccatacgcgc taagtacggc tgaatccgtt ctggtgtcac
     2581 ataaccattt gctgatggca caacaattat gcgattgtct tgctgtgata atgtaatatg
     2641 agctgttcca gatgattcac cttcaatcac ttcaatgcca tctatttgca caccattgtc
     2701 tttaaagttt tgttgaattt gctcaccgaa tgtatcttca ccgacacaac cgatcatatg
     2761 cacttgttca ccgagacgtg ctgccgcaac agcttggttc gcacctttgc ccccaggtgt
     2821 tgtaaagaag tcctcaccta acactgtctc accttgttct ggtaccacct gtgaagatac
     2881 cactaaatcc atagacatac ttccaatgac ataaatttga cgcatcattg attcctcctt
     2941 gtcgtttctc tttctattaa tgtgacatct aacaatgttt tacgttctat gttgctttgc
     3001 ccttcaattt gggcgatcaa tttttgagct gcgcgttcac ctaacgtata cgccggttgt
     3061 cgcacagtcg ttaatccagg caccaaccat ttcgctagtg gcatatcatc ataaccgaca
     3121 acttgcacat cttccggtat gcgctgtccg tcataattga gccattttaa tacacgaaat
     3181 gcagctacat catgactaca aatgacactg tcaatgtcgt tttcatgaac taaacttaaa
     3241 aattttgcct cagtcatagc taaatctgat atttcaaaca ctgtacagcc cgcttcttgt
     3301 aacactttgc gtgccgtttc ataccgctgt tgaaatgatt gataactttg atcttgatac
     3361 acaatcaaca cgcgttggcc ctcgccacgg agcaccactt ccgcttgcaa acgtccccct
     3421 tgttgatgat tggcttcaac acaaaagtca tccttcgtca ctcgatcgat aagtacatgc
     3481 ggtcgctcgt cactttgaag ctgttcaaat gcatgctctg tcgacagttg agatgcgata
     3541 ataccactac aatgattcgc tttaaaagtc gctaaataat tcaactcttt atgctcattc
     3601 atcgcaccat ttccaatcat aatgtgataa ccgtgcgcca tcgctgtatc ttcaacgcca
     3661 cgcgctactt gtgtaaagaa agggttgctc atatctggta acaggagacc gatcacttta
     3721 gattgtttca tattcaaagt ccgtgccact tcattcggtg catagtctaa ctgttgaatc
     3781 gcggcttcaa ttttagcttt cgtcgctgct ttaacatagc cactccgatt catcgcccga
     3841 gacacagttg ctaccgatac ccccgccaaa gcagccactt ctttaatggt cgccatcaca
     3901 cacctcccgt tatggaaacg tttacatata aattaccacg agtttcacaa acgtgcaata
     3961 taaagtgttt catctcttgt taaaactagg acttcccgca cattaacggt agtataaaag
     4021 tcattttcta ttcaaaaatt actttatttt ttctttacca caagcacact acttcgctgt
     4081 ttatcacaac aatgctatat ttgaattagc agaaatatct taacagtata tccatattaa
     4141 agaaaataca aaggagagaa taacaatggc agagtttaca ttaggcgatc aaatgccgaa
     4201 ctttcaattg aacgcaacag atggaacaac attcgatttt caccaattcc aacaaacgca
     4261 tccgaaccaa tggtattttg tgattaattt tcgtggctct tggtgccctg tttgtatgga
     4321 agagctcgat agtttaatta aaaatgtagg ttactttgaa aagaaaaata ttcaaatcat
     4381 tttaacgtca aatgatacag cagaaaatct tcgtcaaatg gttgaggaaa aacaagtgcc
     4441 ttatccagtg cttgtcgatg aaaacaatga ttttgcgaat acttacgggg tttatagcca
     4501 tccagatgat tcgatttatg atgaccacgg gacgcacaat gaacctgcat atttcttagt
     4561 ttctgaagat aatcgtttac tttatcaaca aaaacaaaca aatccatttg gccgcccaag
     4621 catgattgag ttaagaaaga ttattcaata tatccaaaaa agttataaaa aggctgaata
     4681 atagaaaaag aatcgttcta ttggagatgt ggttataact ttatttgtag tgtaaataaa
     4741 actaaggcgt aacactttat ttcatcactg tataatcaca tttttattca aagttcaact
     4801 ccacgtatca ttaaaccaca ttgatactgc gataatttac tgagcatgaa aagaaccctt
     4861 aactcaaatt tcagaagaat gtcatcatcg catgaaccat tgtgctgaac attcaatgag
     4921 atttgtaata agttaagggt tcaaaacctc aatcgaaatc atttttatta aactcgatta
     4981 atgaacaagg cgtcgttaaa atcattttgc taaacctttt catctccgcc acagttcaca
     5041 atggtcggca tgaggctgat aaatacacaa cagacgcgct gttttatgac gctcatactg
     5101 ccaaatataa cgaatgaatt cccaactgaa tctggattat ctccagtttg aggatgtatt
     5161 ttactcatca catagcgacg gatgacacgc aaaatgcagc gccaacgtga gtctgtgagc
     5221 catattaaca aatctgcgcg cgctaatctg tcgtctaatg tgccttcata cgtgccatcc
     5281 attatccatg catctgtttt cacaatttca atgacatgtc gttgcaacac ctctgccggt
     5341 acaagcgtgt cgccctccca tgcataacga tccaaatgat atgcaggtat atgaaacgcc
     5401 tttcccaatt tcgcacacaa cgtcgatttt cccgaacccg gcattcctaa aataacgata
     5461 cgtcgataca tatacatccc ctcctttatt gacatttact attataaacc atcttcaacc
     5521 aatgatacgc cttccgataa catttttcat tatt
//
LOCUS       DANHPA010000125         5541 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.125, whole genome shotgun sequence.
ACCESSION   DANHPA010000125 DANHPA010000000
VERSION     DANHPA010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5541)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5541)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5541
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.125"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            55..696
                     /locus_tag="PTC28_002152"
     CDS             55..696
                     /locus_tag="PTC28_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HDK5717393.1"
                     /translation="MNRETKWYQNWKSGLTLLFVLTVVAFAATCFTNLENALAATEKS
                     TVTSSKAAQPGTTQKFPVELVKAVDGDTAKLKYQGKTETFRFLLIDTPETKHPRLGKQ
                     PFGQEASDRTAKLLKNANKIEVEFDVGRKQDKYHRYLAYIYVDGKMVNNILVKEGLAK
                     VDYVYPPNTRYLSQLEKSQKAAKKAKLGIWSLNSAFEDEISENDTANIGSLAS"
     gene            complement(988..1728)
                     /locus_tag="PTC28_002153"
     CDS             complement(988..1728)
                     /locus_tag="PTC28_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDK5717394.1"
                     /translation="MFTQPKLIIFDLDNTLYAFDALWQEANKATFESYEQFKGMDYDE
                     FLPLYQKYDQHFWKQHDSGLISLDELRQLRLIETLKRYEIDVTYEEAQAYFERFLSLL
                     LSKITVNEKMNALLNDLKAHVEIAILTNGKLTEQRTKIENLQLNTIFNDNIFISEVMG
                     VEKPDAQAFLKVTDELNIRPEETLMVGDSWTNDVKGSINVGMSVIWFNPSQTEDRHLD
                     NHQIQIFTGEIEQLLEKLISMMEADCHF"
     gene            complement(1807..2049)
                     /locus_tag="PTC28_002154"
     CDS             complement(1807..2049)
                     /locus_tag="PTC28_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717395.1"
                     /translation="MLTLIFISKSEDSVTYHFYPENRFEAAPGHITVRLSDLKCFKAK
                     KADPDENIWYLEHALTRVREHIKENHFPESEVVAWY"
     gene            complement(2207..3499)
                     /locus_tag="PTC28_002155"
     CDS             complement(2207..3499)
                     /locus_tag="PTC28_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5717396.1"
                     /translation="MQKILDKLNFKDRKTLIGFLSVVTAGQLIYSSFEAFKGTFYNLL
                     LEVLNVSNAELGAIFGLIGISIFFYIPGGWINNRFSIKSILIVGLLIRFITISVIIFF
                     SPTFQVLKIIAIIWGIVDSFFWPAVLNGVIFFTDQSKRGMGFGLLESVRRAEEMLMNL
                     LIVGIMSLVSGIVVFKGGMLAYNLLIIPLILLIIKYVPKNGIAAMDEEEKTEITGNKS
                     LEALKGLFYVLLKPKVWLASISAMSIYWGYIILIYSVPYLQKTFDLSTTQTALFGIFN
                     TGLMGVLMGVSAGIISDYVFKSSSKMIFAALLLSSIILLGVVFIKGSLFVSMALLIAF
                     SVTTFLAKSVILAPIAEFDIPKKYAGSAMSVGSFAAYAPIFWVYTMNGKLLDAHQDNV
                     VEAYRIIFEIGIIVAFLGSVCTLILLMLNRKSSRQVTE"
     gene            complement(3530..4276)
                     /locus_tag="PTC28_002156"
     CDS             complement(3530..4276)
                     /locus_tag="PTC28_002156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphoryl diester phosphodiesterase"
                     /protein_id="HDK5717397.1"
                     /translation="MTIIFAHRGLSSKAPENTVTAFDLARKVEGVKWLELDVAITKDE
                     QLIIFHDDDLDRTTDTTGEVSETLYEKIEHASSGEWFGPEFKEERVLTFEQLIDFANR
                     YQLNLNIELKGVTGPNGSYLSERMIQLFKEQIKQLDSNIEVLISSFNFALLKLAEQHV
                     PQYTRAVLFERCAFYPDWRTIVDFCGSSIVHLEDINLTRDVVQDIKSSGYTLNVWTVN
                     DKDRANILFNWGVDGIFTDCADDLIHLQKA"
     gene            complement(4927..5112)
                     /locus_tag="PTC28_002157"
     CDS             complement(4927..5112)
                     /locus_tag="PTC28_002157"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717398.1"
                     /translation="MILKIRLIVLILLLPQIIKVACILHLKHLGYKYIGHDQYVKMGI
                     NRTSGMNGKDKPAYKSN"
     gene            5327..5509
                     /locus_tag="PTC28_002158"
     CDS             5327..5509
                     /locus_tag="PTC28_002158"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717399.1"
                     /translation="MIKNSFLKLLSFFIVIAIVVNLLVAFRIIAFEGRGFGIFAIINI
                     IIVYFYFRFKNKEIEK"
BASE COUNT         1860 a         1048 c          826 g         1807 t
ORIGIN      
        1 agatttagtg ggttttagcg gaataaaatg gacattttaa ggaggctaaa atgcatgaat
       61 agagaaacaa agtggtatca aaattggaag agtggtctca cacttttatt tgttttaacg
      121 gttgttgcgt ttgcggcgac atgtttcacg aacctagaaa acgctctagc agctacggaa
      181 aaatctaccg tcacatcatc taaagcagca caaccaggta caacacaaaa atttcctgta
      241 gaacttgtca aagctgtcga cggtgacaca gcaaaattaa aataccaagg aaagactgaa
      301 acatttcgct ttttattaat tgatacaccg gaaactaaac atccacgtct cggcaagcaa
      361 ccatttggtc aagaagcttc agacagaacg gcaaaactac ttaaaaatgc aaacaaaata
      421 gaggtagaat ttgatgtagg tcgaaaacaa gacaaatatc accgttattt agcttatatt
      481 tatgttgatg gtaaaatggt caacaacatt ttagtgaagg aaggccttgc taaagtagac
      541 tatgtttacc caccgaatac gagatattta agtcaattag agaaatcaca gaaagcagca
      601 aaaaaagcaa aattaggtat atggagcttg aattctgcat ttgaagatga aatcagcgaa
      661 aatgacacag caaatattgg aagtctggcg tcataagtag taacagaaaa aaataacaga
      721 agcagtacga tatgacatta agattttcca ataggtgtat tcatttatca tattacatct
      781 attaatcacc ttgactgtca taaaaatcaa cttgtatata atgtgaattc gtttttcata
      841 agggtgatga ggttggaaca tcaatttgtt ccagcctgtt tttcactcat agccaattct
      901 ttaacgtcaa tgccctctgt ttccttccct cccattttcc attattctcc atactatcac
      961 gacctaacat tgtatgaatc aaatgttcta aaaatgacaa tccgcttcca tcattgatat
     1021 gagcttttcc aataattgtt caatctcacc agtaaaaatt tgaatttggt gattatctaa
     1081 atgtcgatct tcagtttgtg agggattgaa ccaaatcaca gacatgccta catttatgct
     1141 acctttaaca tcattagtcc atgaatcccc taccattaat gtttcttcag ggcgaatatt
     1201 caactcatca gtcaccttta aaaacgcttg tgcatccggt ttttcaacac ccattacttc
     1261 agaaataaaa atattgtcat taaaaatcgt attcagctgc aagttttcaa tctttgtcct
     1321 ttgttcagtt aattttccat tcgttaaaat cgcaatttca acatgtgcct ttaaatcgtt
     1381 caacagcgca ttcatttttt cattcaccgt tattttagac aataataaac ttaaaaatcg
     1441 ctcaaaatac gcttgtgcct cttcatacgt cacgtcgatt tcataacgct ttaatgtttc
     1501 aattaatcgc agttgcctta attcgtctaa actgatcagc ccagaatcat gttgcttcca
     1561 aaaatgttga tcatattttt gataaagtgg aagaaattca tcataatcca tgcctttaaa
     1621 ctgttcatat gattcaaaag ttgctttatt tgcctcttgc cataatgcat caaacgcata
     1681 taacgtatta tctaaatcaa aaataatgag cttaggttgt gtgaacatgg ttctactcct
     1741 cgattttttc gtatttgata gttcatgata gacataaaat tcagaaaata gcaaatagta
     1801 cttttcttaa taccatgcaa caacttctga ttcaggaaag tgattttctt taatatgttc
     1861 tctcactctt gtaagtgcat gctcaaggta ccatatattt tcatctggat ctgctttttt
     1921 cgctttaaaa cattttaagt cagaaagtcg gactgtgata tgtcctggcg ctgcttcaaa
     1981 acgattttct ggataaaaat gataggtgac actgtcctca cttttactga tgaatattaa
     2041 tgttaacaat caaatcactc tctttcacca tttcctactg tgcatccaca ccgaatttga
     2101 atagttcaaa atataatgtg attatatctc aattttagta taaacacact ttccttcaaa
     2161 aaaacgagtc agaataactc caactcgttg tgtaatataa tttctcttat tcagtaactt
     2221 gacggcttga tttgcgattt aacatgagca aaatcagtgt acaaacacta cctaaaaacg
     2281 cgacgataat acctatttca aaaataattc tgtatgcttc aacgacgtta tcttgatggg
     2341 catcgagcaa tttaccattc attgtataca cccagaagat cggcgcataa gcagcgaatg
     2401 aaccgacact catcgcagaa ccagcatatt ttttaggaat atcgaattca gcaattggcg
     2461 caaggattac acttttcgcc aagaatgttg taactgaaaa tgcgattaac aatgccatgc
     2521 tgacaaatag actaccttta ataaatacaa cacctagtaa tatgatagat gataacaaca
     2581 atgctgcgaa aatcatttta gatgatgatt tgaacacata gtcagaaata atccctgctg
     2641 acacacccat tagcacaccc attaaacctg tgttgaaaat tccaaatagt gccgtttgtg
     2701 ttgttgataa atcaaaagtt ttctgtaaat atgggacact gtaaatcaaa atgatatacc
     2761 cccagtaaat agacatcgca ctgattgatg ctagccatac ttttggtttc aataacacat
     2821 aaaataaccc ttttaatgcc tctaacgatt tatttccagt aatttcagtt ttttcttctt
     2881 catccattgc agcaatcccg tttttaggga catatttgat aatgagtaaa atcaatggaa
     2941 tgataagcaa gttatatgcc aacataccac ctttgaatac aacaatacca ctgactaatg
     3001 acataattcc gacgatgagc aagttcatga gcatctcttc tgcacggcga acggattcta
     3061 atagaccaaa tcccatacca cgcttacttt gatccgtaaa aaagatgaca ccattgagta
     3121 cagctggcca gaaaaatgag tcaacaatcc cccaaataat cgcgataatt ttcagcactt
     3181 ggaatgtcgg gctgaagaaa ataatgacag aaattgtaat aaaacgaatc aataaaccaa
     3241 caattaagat cgatttgatg gagaaacggt tattaatcca acctcctgga atataaaaga
     3301 agatggagat accaattaat ccaaaaattg cacctaactc cgcattactc acattcaaaa
     3361 cttctaacaa taaattgtag aatgtccctt taaaagcttc aaaactagaa tagattaatt
     3421 gtcctgccgt cacaactgat aaaaatccaa tcagtgtttt acggtcttta aaattgagtt
     3481 tatcaagtat tttttgcata ctgatgttcc tttcattaag ttgttagttc tatgcttttt
     3541 gtaaatgtat taaatcgtct gcacagtccg taaaaatgcc atctacgccc caattgaaca
     3601 gtatattcgc acggtcttta tcattaactg tccacacatt taaagtgtaa ccagatgatt
     3661 taatatcttg tacgacatca cgcgttaaat tgatatcctc caaatgaacg atggaagaac
     3721 cacaaaaatc aacaatggta cgccaatctg gataaaaagc acagcgttca aataacaccg
     3781 ccctcgtata ctgtggcaca tgttgttctg ctagtttaag taacgcaaag ttgaaacttg
     3841 agataagtac ttcgatgttc gaatccaatt gtttaatctg ttctttaaac aattgaatca
     3901 tgcgctcact aagatacgac ccatttggac ctgtaacccc tttaagttca atgttcaaat
     3961 tcagttgata gcgattcgca aagtcaataa gttgttcaaa cgtcaacaca cgctcttctt
     4021 tgaactcagg accgaaccat tctccagatg aagcgtgctc aattttttca tataacgttt
     4081 cacttacttc tcctgtcgtg tccgttgtgc gatctaaatc gtcatcgtga aaaatgatta
     4141 actgctcatc tttcgtaatc gctacatcca actcgagcca tttcacgcct tctacttttc
     4201 gagccaaatc aaatgctgtc actgtatttt ctggtgcctt actcgacaaa cctctgtgtg
     4261 caaaaattat tgtcatatgg atgccctgac tactcaaatc tttaatttct gtctgtatga
     4321 acaacgactt tttataaaat cacatttaac atgcacctca tgcaactcta ttgagggtac
     4381 gctttgattt acacagtcta tgaagttaaa gttactattt aagtagtttt cctttcttag
     4441 tttttatatc aaagtttatg tttttgattg tactaacgaa aacacaacat cgcgctttct
     4501 tcatattgct tgtattttat cttttcgact atttcgacta aattgtagaa atgagaaatg
     4561 acgacttgtt gtaatgacaa aacgtataca cattgtcatt tatttttctc aaatagcgaa
     4621 acaaccattt atccatatca atcagcatgc atacaacatg ataataccgc atatgtaaag
     4681 gtttccatta gacattttca atattataat gtgttaatat aattatgaca atggtttgtc
     4741 aaaaatttta acgtatgatc atcattttat taagtagagt tagaagttta ttgttttttg
     4801 gacatagtaa aaaacactcg ctaactttta ctgataaaaa atcatgagtg ttcattcaaa
     4861 agctgattta attgttgatt aatgtccgtg cattaaactt acattaatgg caatttgaat
     4921 cacacatcaa ttagacttgt atgctggttt atctttccca ttcataccac ttgtacgatt
     4981 tatccccatt tttacatatt gatcgtgacc aatatacttg tagcctaaat gttttaaatg
     5041 taaaatacac gctactttta tgatttgtgg taacagtaaa attaatacaa ttaaacgtat
     5101 tttgagtatc atcacgcatt cccctattca tatttcaata caagtagttg ccattgataa
     5161 aaaattcgtc atcattttac ctaacaaaca aaactgtctt tatcaacatt gaatcctata
     5221 tctatggatg tacaattcat ataaatttta aacaattcat gttgtatgtt aaaatcactt
     5281 caagtcatca atacatacaa aaatgataaa aggaatgtgt atcattatga ttaaaaatag
     5341 ttttttaaaa ttgctttcat tttttatcgt tatagcgata gttgtgaact tgcttgttgc
     5401 tttccgtatc atagcatttg agggacgtgg ctttggtatt tttgcaatca tcaatatcat
     5461 cattgtctat ttctatttta gattcaaaaa taaagagatt gagaagtaaa tgatgcaaga
     5521 tttaggcacc ttaatatatt a
//
LOCUS       DANHPA010000126         5522 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.126, whole genome shotgun sequence.
ACCESSION   DANHPA010000126 DANHPA010000000
VERSION     DANHPA010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5522)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5522)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5522
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.126"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            386..1270
                     /locus_tag="PTC28_002159"
     CDS             386..1270
                     /locus_tag="PTC28_002159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDK5717400.1"
                     /translation="MMTQNNPTNRFYNEDFPKQYQPYPGIQNQMTPVPDCGEETYEGS
                     NKLVGKKALVTGGDSGIGRAAAIAYAKEGADVAIAYHPDEQADADEVKAVIEKAGQKA
                     VLLPGDLRDETYAKQMVKDAHEQLNGLDILVLNAGMQQFEHEIENLSAEQLTDTFEVN
                     VFSTVYSIQQALEYFETGASIILTSSIQGVKPSAHLVDYAMTKSCNISLTKSLAAQLG
                     PKGIRVNAVAPGPIWTALQISGGQPQESIPEFGQNQPLQRAGQPVELADVYVLLASDN
                     ASYITGQVYGITGGAPIN"
     gene            1497..2654
                     /locus_tag="PTC28_002160"
     CDS             1497..2654
                     /locus_tag="PTC28_002160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SidA/IucD/PvdA family monooxygenase"
                     /protein_id="HDK5717401.1"
                     /translation="MTYEWVIIGGGVHATTIALQLRQLGLPVEQLRMIDPHPHLLDQF
                     DRQTARIGMPYLRSPLVHHCHPEPFNLKKFAKQQGYTQPMIGPYQRPRLDMFFDHTRH
                     WIRHYGLETCHICQKAVHLCRCCEDWEITLDNQQQIRTQHVVLAMGTHHTPFIPPAFQ
                     DQPHVQHIHSLDLDTSMQGSHVVGSGISAGHLVIKLLTESPDKTVHLWMKKPFDVHHF
                     DADPAWLGPKNMKPFEAMPLAERIHVNKKERHKGSMPRDMYMTLKNYEKAGRLIVHHT
                     PIERLEDHCIVSGETRVAYDGIYLATGFVLDVMTQPLIQDILRLPEAQLVAGYPKTTT
                     QLEWVPRLYVSGMLADLALGPFARNIMGGRQAALRIGQAYTESTTAYQNAV"
     gene            2726..3121
                     /locus_tag="PTC28_002161"
     CDS             2726..3121
                     /locus_tag="PTC28_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717402.1"
                     /translation="MKKTKGEKPPKYRKINHRVMQVIFAFGMILLILFIGMGTVIPEL
                     NRHTYEGIIVEKYREDHGMTTGTTQFIELRQGDRTIKIENSDILLHGKWDSLAVQKDI
                     REGEKATVHTIGFDVPSLRIYPNLYQIEQ"
     gene            complement(3875..5005)
                     /locus_tag="PTC28_002162"
     CDS             complement(3875..5005)
                     /locus_tag="PTC28_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDK5717403.1"
                     /translation="MIKQHWAQKVVKKASSIIKAEVLITNRGGQIIATSNPDRVGEVH
                     QAARHSIERNLPIDIELEDMSFWNAQHPGVILPIELHGRVYGALLVSGNPDEIRAYSH
                     LLKLHAEFIVEEELEHYSRFQETLSRTQMLAHILFNPDVYFQNYQRKSLIDRLGLNDE
                     FAVALISMQSSSKSKTSALRDALESLRLPGDEIVEISPQEYVYIVKSNPNRGKSHEEL
                     IDGFDKNVQNEVFDRTLITLGSFTTGIKGLVQSYHEARSLQSLLHDLKIQEGLHTYKS
                     HELATICNNIKKFTPENETTLVANYKKLLHLGEDKYLGETIEAYFRNHGKLVKTANDL
                     FIHRNTLNYRIKKIHEITGWDPNTIDGIVLLRIAQLLYEGSE"
BASE COUNT         1738 a          991 c         1101 g         1692 t
ORIGIN      
        1 aacatttaaa caactcctta acttttggta tgtttaaatt ttaataaatt tataaattgc
       61 aaagtatatt tttgcctaag tgttatattt ttatgcctaa gtgtaaaata acttcttttg
      121 ggccacgatt ttcgacagct agggtatgcc gtttcgttag aattttcaat taaaaagagt
      181 ctcatttaaa aatgatacta taaataaaaa aattttcgta tgtaaaagat gttaaaaaga
      241 gtaaatttaa attcaggttg agacgttgaa tataacagga gaattaaaag aaaatgccca
      301 gaattttata tagcgtgttc aaaatgaatg tttctttcaa ggggatatcg ggaattttag
      361 aagtaaacta ttgaaaagga gttttataat gactcaaaat aatccaacaa accgctttta
      421 caatgaagac tttccgaaac aatatcaacc ttatccaggc atacaaaatc aaatgacacc
      481 ggtacctgat tgtggtgaag aaacatatga aggttcgaac aaattagtgg gcaaaaaagc
      541 attagtgaca ggtggcgact caggtattgg tagagcagcg gcgattgctt atgcgaaaga
      601 aggcgcggat gttgctattg cttatcaccc tgacgaacaa gccgatgcgg atgaagtgaa
      661 agccgtcatt gagaaagcag gtcaaaaagc tgtcttgtta ccaggcgact tacgagatga
      721 aacatatgcg aaacaaatgg ttaaagatgc acatgaacaa ctcaatggtt tagatattct
      781 cgtattaaat gcaggtatgc aacaattcga acatgaaatt gaaaacttat ctgctgaaca
      841 attgacggat acgtttgaag tgaatgtgtt ctcaacagtt tattcaattc aacaagcgtt
      901 agaatacttc gaaacaggtg cgagtattat tttaacgtca tcgattcaag gtgtgaaacc
      961 aagcgcacat ttagtggatt atgcgatgac caaatcatgt aacatttcat taactaaaag
     1021 tctcgcagcg caactaggac ctaaaggcat tcgtgtcaat gctgtggcgc ctggcccaat
     1081 ttggacggcg ttgcaaattt caggaggtca accgcaagaa agtatccctg aatttggtca
     1141 aaatcaaccg ttacagcgtg caggtcagcc agttgaactc gcggatgttt atgtcctgct
     1201 tgcttctgat aacgcaagct atattacagg gcaagtttat ggtatcactg gtggtgcacc
     1261 gattaattaa tagaatgaga gtgagtatta aaagagttag gacgttgagt aaatgacgtc
     1321 ttagctcttt tttgggttga tgggtatcgc gatttttaaa gaagacatat taaatgtaat
     1381 gccttccttt ttataaggag gaaatccgac atatcttttt acgaaaatag ttgattcata
     1441 cgtcaaagtc ctttattata aatcgtaatc attcctatat agaaagagtg aatcctatga
     1501 catacgaatg ggttattatc ggtgggggtg tgcatgcgac aacgattgca ttacaactcc
     1561 gacaacttgg attacccgtg gaacaactga gaatgattga tccacatcct catttattag
     1621 atcaatttga tagacaaaca gcgcgtatcg ggatgcctta tttacgttcg ccattagtgc
     1681 atcattgtca tcctgaacct tttaatttga aaaaattcgc gaaacaacaa ggctatacgc
     1741 aaccgatgat tggtccgtat caacgcccaa gattagatat gtttttcgac catacacgtc
     1801 attggatacg tcattacggt ttagagacat gtcatatttg tcaaaaggca gtacacctat
     1861 gccgttgctg tgaagattgg gaaattacgt tagacaatca gcaacaaatt cgaacacaac
     1921 acgtcgtttt agctatgggt acacaccata cgccgtttat tccacctgca tttcaagatc
     1981 aaccgcacgt gcaacatatt catagtcttg acctcgatac ctcaatgcaa ggttctcatg
     2041 tagtcggaag tgggatttcg gcagggcatc tcgttattaa attgctcaca gaaagtccag
     2101 ataaaactgt tcatttatgg atgaagaagc cttttgatgt ccatcacttc gatgcggatc
     2161 cagcatggtt aggtccgaaa aatatgaagc cttttgaagc gatgccgtta gccgaaagaa
     2221 tacacgttaa caaaaaagaa cgtcataaag ggtctatgcc gagagatatg tatatgacat
     2281 tgaaaaatta tgaaaaagcg ggtcgtttga tcgtgcatca tacgcctatc gagcgactag
     2341 aagaccattg tatcgtttcc ggagagacgc gcgtggcata cgatggcatt tatttagcga
     2401 cgggctttgt tcttgatgtg atgacacagc cactcattca agatatttta cgactacctg
     2461 aagcacaact cgtcgcaggt tatccgaaaa ctacaacaca gctggagtgg gtgcctcgtt
     2521 tatacgtttc aggcatgtta gctgacttgg cactaggtcc ttttgcccgt aatattatgg
     2581 gtggtcggca agcggcgtta cgtatcggtc aagcgtatac cgaaagtaca acagcttatc
     2641 agaacgcagt ctaatcatga ttttgtaatc gcactatgaa atgattcgca tatccgatat
     2701 aatgcgagtg ataggagcga taactatgaa aaaaactaaa ggcgaaaaac ctccaaaata
     2761 tcgaaaaatc aatcatcgtg tgatgcaggt tatctttgca tttggtatga tcttactcat
     2821 tttatttatt ggtatgggca ctgtgattcc agaacttaac cgtcacacgt atgaaggtat
     2881 catcgtagaa aaatatagag aagatcatgg aatgacgaca ggcacaacac agtttattga
     2941 actgagacaa ggcgatcgta cgattaagat tgagaacagt gatattttat tacatggcaa
     3001 atgggatagt ctggcggtac aaaaagacat tcgtgaaggt gagaaggcga ccgtgcatac
     3061 gattggattt gacgtaccca gtcttcgcat ctatccgaac ttgtatcaaa ttgagcaata
     3121 accatttttt aaatgagaca caaaaaagta gagactagga catgatgttt tcccagtctc
     3181 tgcttctatt tatggattga tatccattaa tggtgattaa accgttgaaa aataagggtg
     3241 tatgtaaaaa acgatgcgat cgttttcttg atttcatcaa cttgcaagca gttgtgcagt
     3301 atttgaaata tgattgccca gaaggctgag acgcctgagg gataagttaa gggctaaaca
     3361 acgtcattta actttaaaag tggctaccgt ttaacgtagt ggctgtctga cttctcaatg
     3421 cgcatgattt tgagaagtcg agtcagcctt gcgggggtag tacgacgaaa gctttgttac
     3481 acatgagatt tctgtactgc tcccaaaatc cacaatgaat gggtgcgctg ggaatcaata
     3541 aacggtgttc caaaagcagg attttcgaca gaacccctgc catttcggca aaatttggaa
     3601 agcgattttg ctcatcgctc ggttctgctc aaattctaag cgcttttgtc acaacctccc
     3661 ttcatcccct aggaaaggga aggcttgatg gcaatcaaaa accgaaaatc gtagggaggg
     3721 caagtttaac aaaatattgc atcaatcgca tcaaaagttt ttatgtcccg ccccctacct
     3781 ttttatggac ttttattcat tatgatgata acatcggcga aaaatgaggg ggaatgagat
     3841 aaaaatttta tgtcttaacc tcatgttttt aaatttattc tgaaccttca taaagcaact
     3901 gtgcaattct taataacaca atcccatcaa ttgtattcgg atcccaacct gtaatttcat
     3961 ggattttttt aatacgataa ttcaatgtat tccgatgaat aaacaaatca ttcgcagttt
     4021 tgactaactt cccgtggttt ctaaaataag cttcaatcgt ttctcctaag tacttgtctt
     4081 cccctaaatg cagtagtttc ttataatttg cgaccaatgt cgtttcattt tctggtgtga
     4141 attttttaat attattacaa atcgttgcaa gttcatgtga tttataagta tgaagccctt
     4201 cttgaatttt taaatcgtgc aatagggact gcaacgaacg cgcttcatga taggactgaa
     4261 ctaaaccttt gatacccgtt gtaaatgaac ccagtgtaat taatgtacgg tcaaatactt
     4321 cattttgtac atttttatcg aaaccatcaa ttaattcttc atgagattta ccgcgattag
     4381 ggttagattt gacgatataa acgtattctt gtggcgaaat ttcgacaatc tcatcccctg
     4441 gtaatctcaa tgattctaat gcatcacgta aagctgacgt tttggattta ctcgaacttt
     4501 gcatagaaat aagcgcaacg gcaaattcat catttaagcc taagcgatcg atcaaacttt
     4561 tgcgttggta attttgaaag taaacgtcag gattgaataa aatatgtgct aacatttgcg
     4621 tgcgtgacaa tgtttcttga aaacgagagt agtgttctaa ctcttcttca acgataaatt
     4681 cggcatgaag ttttaataaa tgtgaataag cacgtatttc atcaggattg ccactgacaa
     4741 gtagggcacc gtaaactctt ccatgtagtt cgataggaag aataacacca ggatgttgcg
     4801 cgttccaaaa agacatatct tctaattcaa tatcgatggg caggttacgt tcaatcgagt
     4861 ggcgcgcagc ttgatgtact tcacctacac gatcagggtt agatgttgcg ataatttgac
     4921 caccccgatt cgtaatcagt acttcagctt taatgataga tgacgctttt tttacgactt
     4981 tttgagccca atgttgtttt atcatttact ccagctccta ttttttatat gtattctaaa
     5041 taaaggtaaa gcagttccct tttgttgaat agtagaatgg acatcagaag ttgagtcggc
     5101 ctgttggatt tgtcacacga acccttttga ttgcatcgtc tcatgactgg caaaatacca
     5161 acacttccta gattgtagtg aaagggctgt tgtcatacat gttgagaaag ggcaatcttc
     5221 atatcatagc gtgtttccaa aacgaacaac agaaaaaata gaatataatt tttttgttct
     5281 gttacgcttg atttttcact gaatgatatt aaatgtgtat atcatatcat agaatgaatg
     5341 gattgtaata ggtttaccga aaccttttct ttaagttttt ttgaactttg ttaactttga
     5401 tttacaatgt aaaggtgcaa ttcaatcact cttgtttaag tgttaactgt acttttataa
     5461 taaaacactt tttacttttt atgcaaattt atatctaatt accttagaag ttatatatta
     5521 tt
//
LOCUS       DANHPA010000127         5432 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.127, whole genome shotgun sequence.
ACCESSION   DANHPA010000127 DANHPA010000000
VERSION     DANHPA010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5432)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5432)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5432
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.127"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(505..735)
                     /locus_tag="PTC28_002163"
                     /pseudo
     CDS             complement(505..735)
                     /locus_tag="PTC28_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613462.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil-5-)-methyltransferase RumA"
     gene            complement(1268..2635)
                     /locus_tag="PTC28_002164"
     CDS             complement(1268..2635)
                     /locus_tag="PTC28_002164"
                     /inference="COORDINATES: protein motif:HMM:NF012235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDK5717404.1"
                     /translation="MSILTLKNIRCEMDGKLLFEADGLTIEEGDVIGLIGKNGAGKTC
                     LLKILAGELSDYAGYISGNRLTYFSELCITEDMTQSGGELSISSFLNALRQSVPLYLL
                     DEPTTYLDQHHLKKVVRTIRRSPSSFCIASHDRAFLDAVATKIWLLEQGKITEYNGSF
                     SDYVLARSMQLSQYEQELKQYQKEKKKIKQSLRMMKEKQDQKKGKPKKMSTSEYRIAG
                     IKTKYGVKQKKLQKRITRQQKKLEQLKQPYQVEDKYDISFLSQLHCLPKRKIIIPSHE
                     AKIGQKSLWHTPTIHLNSGDKLGIIGRNGAGKTTYLNYLISVLPSTYKICYFRQNHFQ
                     YLDPKMTVYEAIVEATNGYLSEHHIRTLLALLDFKRDKVFRLIGDLSRGEHVKISLLS
                     LLVSESDILILDEMTNFLDIKAIEAVEKVLATYSGILIFVSHDQYFVQRLATSILDID
                     TYKIM"
     gene            complement(2649..3839)
                     /locus_tag="PTC28_002165"
     CDS             complement(2649..3839)
                     /locus_tag="PTC28_002165"
                     /inference="COORDINATES: protein motif:HMM:NF019310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5717405.1"
                     /translation="MKTKRIIASDFLTTMMSSALTIYIYWFAYQYFSSQLIISIIGFG
                     QLSGVFLSSLGGGISDSMNKLFFIKTLNFFKVGLLFMVLILENVVNMEILLPLFMFAS
                     TVIGGLQSPTLESLVPFLASSDEALFRINAVVSSSTQVASIMAIVLSAVYISFLSFVT
                     IVFVTLFITAIATILLVGLTVETPLKSTSVVNNMKHGASYIFKTPYIRNLIPVALVMN
                     FSFWSIFLLLPKIANDSFSFLKTSYSGMELSFALGAGLGGILFAKFFYDVKDKYRLFK
                     RSLFSQSYVLLLLGIVLLIPNSVLAYTGMLLCWFLYALINTIFSILYFGKIQLNVPRE
                     MIGSVFGAILTLFSLVNPIAAIMSGVLVSHFKIPLLIILLSSLMLLAAWSIRFLADVE
                     TVFD"
     gene            complement(3850..4893)
                     /locus_tag="PTC28_002166"
     CDS             complement(3850..4893)
                     /locus_tag="PTC28_002166"
                     /inference="COORDINATES: protein motif:HMM:NF014661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcaO-like family protein"
                     /protein_id="HDK5717406.1"
                     /translation="MLENVSEHGVSGFYTYHFTEGNSFRPCATRIIEKEAIKATKDEF
                     MELMLISSKSFPFVFFGGKSLGNFKLPIHLHPFMWQKRTIQDVNWYNEKNVEYIPFYN
                     YKDGSLKYIPKELSVYYEKAKGIGLSFSPQEGYSYDRDIVLAKVKAVMELIEKDIVTL
                     WWHRETSSRIIVIDDDTDENIKIIRNQLLNQGIDITLLDIENDLGVYVVVCILKQDDF
                     PSITYGSAAHFEIKGAVKHAIFEAISCIVGLRYEFIHFKKIRTSFTYPDFISDSPLTN
                     LSDYKEILNLKTAINKYDIYYSYISADEGYLVKAYCYELQPTLYSATVPLTKRFFRVN
                     KKEVRIKEDFPFI"
     gene            complement(4946..>5432)
                     /locus_tag="PTC28_002167"
     CDS             complement(4946..>5432)
                     /locus_tag="PTC28_002167"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717407.1"
                     /translation="EIAPLFKFSQLKNGSINQYKKYDHSFAKGVFEKAGVVTNETKVW
                     ESVIHSLQNGGEVDYLNDQQNKLIVFENTLQNLFEEYQKLEKYIRQGVSHVAIRDIEV
                     DITPLTAMALTKISELMSSLTYLCLVEYSAHTSITGKTIDVLDLLPKTNKNSIQHLKA
                     N"
BASE COUNT         1814 a         1047 c          775 g         1796 t
ORIGIN      
        1 tttttctaaa agttttgccg taatttttca tatgatacct ccaattcata tagaaattac
       61 gaataaatgt ctatgttgca tcaagatgat taaattttac attgctttta cctccgtaaa
      121 aaaatacttt tttaatatgc cattaatttt agtttatgat gtcaacccaa aatggaggat
      181 attcttgctg agctgaacat attttataga tagcacgtaa aactaaataa tttaaataag
      241 ctattttacc aacttcttaa tcttatatct ttaatatagc gtatgaatac agaatatgta
      301 aatgtgtatt ttgaatattc agaacaatga ttttatttta tatttagaat aacttcaaaa
      361 cttcattact cgccattctc tagagattaa cactgtcaaa tcagttccag tatcaacgct
      421 cctaaaatag caccaaaaca aaaaagggtt ctaagtcaca ttctcaaaaa tgttctcaaa
      481 aaacccttga gtgattaatc tatatcaata ttttcttact aataacgcaa ctgtctcgac
      541 atgtgtcgta tgcggaaaca tatcgacagg tgtcatttct tttagttcat attgcgtgct
      601 tagcatttca atatctcgta attgtgtact tggattgcat gacacataga cgatacgttt
      661 tggggctaac gcgtttaaag tttcaataaa tgtcgcgtca caccctttgc gcggtgggtc
      721 aactgtcacc acatcattct acgctgattc gaaaaatcaa ctactgtagc attcttgcag
      781 tcgtgagtct cccctttatc aaaacgtgag ggttggaatg atgatatccc tcttttagaa
      841 atttccttaa acgtaacccc tttgtaattt cttattattc tgaaatttat agcgtgattt
      901 ttcatatgtt acctacgttt cacacagaaa ttacgaatta tcattgcatg gtttcatttt
      961 tatttttgat gacattggtt taccgtccaa aaataaaata actttcttta ataatggata
     1021 ttgaacactc acctttaact tgatcacgga ggctacacaa cttttaaaaa tgagaacatc
     1081 acatctctgc gtcaataata tagcattaca gctagtagtc tgtaccttaa aacttttatt
     1141 gtttttgtta aactgtcatc aaaacagggt acctaatcaa acggacgtcc tttttatact
     1201 atcactattt gatagatgct tgatggaggg agattctttc actccaaaat atttgtaatt
     1261 gtccatccta cattatctta taggtatcaa tatctagaat cgaagtagct aaacgttgta
     1321 caaaatactg atcatgactc acaaatatca gtatgcctga atatgtagca agcacctttt
     1381 ccactgcttc gatagccttt atatctaaaa agttggtcat ttcatctaaa atcaaaatat
     1441 cagactcaga aactaagaga gataataatg aaatcttcac gtgctcccct cggcttaaat
     1501 ctcctattaa tcgaaatacc ttgtctcttt taaaatctaa taacgccaac aaagttctaa
     1561 tgtgatgttc gcttaaatac ccattcgtag cttcgacaat cgcttcatat actgtcatct
     1621 ttgggtctaa gtactgaaaa tgattttggc gaaaataaca aattttatat gtagaaggta
     1681 aaactgaaat taagtaattc aaataagttg ttttgcctgc accatttctt ccaataattc
     1741 ctaatttatc accactattt aaatggatag ttggggtatg ccacaagctt ttttgcccga
     1801 ttttcgcttc gtgactagga atgataattt ttcttttggg taaacaatga agttgtgata
     1861 aaaatgaaat atcatatttg tcctcaactt gatatggttg ttttaactgt tctaactttt
     1921 tttgttgtcg tgtaatacgc ttctgtaact ttttttgttt cacaccgtac ttagttttga
     1981 tacccgcaat acgatattct gaagtactca tcttctttgg ttttcccttt ttctgatctt
     2041 gcttttcttt catcattcga agtgattgtt ttattttctt tttttccttc tgatattgtt
     2101 tcaactcttg ctcatattgt gataactgca ttgaacgtgc taacacataa tctgaaaaag
     2161 aaccattata ttctgttatt tttccttgct ctaacaacca tattttagtc gcaactgcat
     2221 ctaaaaaagc ccgatcatgg ctcgctatac aaaaagaaga tggggagcgt ctaatcgttc
     2281 ttactacttt cttcaaatga tgttgatcta aatacgttgt aggttcgtcc aacaaataga
     2341 ggggcaccga ctgtcttaat gcgttgagaa aacttgaaat gcttagttct ccaccacttt
     2401 gagtcatatc ctccgttata cagagttcac taaaataagt cagacgattg cccgatatat
     2461 agccagcata atcgcttaac tctcctgcta atatttttaa caaacacgtc tttccagcac
     2521 cgttctttcc gataaggcca atgacatcgc cttcctcaat cgttaaacca tccgcttcaa
     2581 ataataattt cccatccatc tcacacctga tgtttttaag tgttaatata gacatatccc
     2641 tccccccttt aatcaaatac cgtttcaaca tctgctagga aacgaatact ccaggcagct
     2701 aacaacatga gtgaagacaa caatataatt aacagaggta ttttaaaatg cgaaacgaga
     2761 actcccgaca tgatggctgc gatgggattg actaatgaaa agagcgttaa aattgctcca
     2821 aaaacactgc caatcatttc tctagggaca ttcaattgaa tctttccaaa atagagaata
     2881 gagaaaatcg tgttgatcaa agcatacaaa aaccagcaca acagcatccc ggtataggca
     2941 agaacactgt taggaataag taaaacgatt cctaataaca acaaaacata actctgtgaa
     3001 aacaaactcc tcttaaataa acgatattta tctttaacat catagaagaa tttcgcaaat
     3061 aagatcccgc ctaagcccgc tcctaaagca aaggagagct ccatgccact ataagaggtt
     3121 tttaaaaatg aaaaactatc attagcgatt ttaggtaaga gcaagaaaat actccaaaac
     3181 gagaaattca tgaccaatgc gacaggaata aggttacgaa tataaggcgt tttaaagata
     3241 taactcgccc catgcttcat attattaaca actgaagtag acttcaatgg cgtttccacc
     3301 gtcagtccta caagtaaaat cgttgcgatg gcagtgataa aaagggtcac aaaaacaatc
     3361 gttacaaaag acagaaatga aatatagact gcagataaaa caatcgccat aatagatgca
     3421 acctgtgttg aactcgaaac cacagcgtta atacgaaaaa gcgcctcatc gctactggct
     3481 aaaaatggaa ccaatgattc taacgtaggt gactgtaaac ctcctatcac tgttgaagca
     3541 aacataaaaa gtggcaacaa aatttccatg ttcacaacgt tctctaatat caacaccata
     3601 aaaagtaatc cgactttaaa gaagttcaga gttttgatga aaaacagctt gttcatactg
     3661 tctgagatgc caccaccaag acttgagaga aacacaccac ttaattgccc aaaaccgatg
     3721 attgatatga tgagttgact agagaagtat tgataagcaa accaatatat ataaatcgtt
     3781 aaggctgaag acatcatcgt tgttaaaaaa tctgacgcaa taattctttt agttttcata
     3841 actcaccttc tatatgaacg gaaaatcttc tttaatcctg acttccttct tgtttactct
     3901 aaagaaacgt ttagttaaag gaaccgttgc actatacaag gtgggttgta attcataaca
     3961 gtacgctttc actaagtatc cttcatcagc agaaatataa gaataatata tatcatattt
     4021 attaatggct gtttttaagt tcaatatctc tttataatcg gataaattag ttaatggact
     4081 atcactaata aaatcaggat acgtaaaact agtacggatt tttttaaaat gaatgaactc
     4141 atacctcaaa cccacaatac atgaaatcgc ttcaaaaatt gcatgtttaa ctgcaccttt
     4201 aatttcaaaa tgcgctgcac taccataagt gattgatgga aagtcatctt gcttgaggat
     4261 acacacaacc acataaacac ctaaatcatt ttcaatatct aataacgtga tatctatacc
     4321 ttgatttaat aattgatttc taataatttt tatattctca tcagtatcat catcaatcac
     4381 aataattcta cttgatgttt ctctatgcca ccacaaagta acaatatctt tttctattaa
     4441 ttccatgacc gccttgactt tagcaagtac aatatctcga tcataggaat aaccctcttg
     4501 aggactaaaa gatagcccaa tccctttcgc tttttcataa tagacgctta attctttcgg
     4561 tatatacttc aaagatccgt ctttgtagtt ataaaaaggg atatactcaa cattcttttc
     4621 attataccaa ttcacatctt ggatagttcg tttttgccac ataaacggat gaagatgaat
     4681 gggtagttta aaattaccta aggatttccc tccgaaaaat acaaacggga aagatttact
     4741 tgaaataagc attaactcca taaactcatc tttagtagct tttatagctt ccttttcaat
     4801 aattcttgta gcacatggtc taaatgagtt tccctctgta aagtgatatg tgtaaaatcc
     4861 tgaaacccca tgttcagaaa cattctctaa catattaatc cccctacata aaaaaactgt
     4921 accgtataga cacagtatat aaaaatcaat ttgcttttag atgctgtata ctatttttgt
     4981 ttgtttttgg tagtaaatcc aatacatcaa tcgttttgcc agtgatactt gtatgggctg
     5041 aatattcaac taaacataag tatgttaatg aactcatcaa ttcactgatt ttagtcaagg
     5101 ccattgcagt taacggcgta atatcaactt caatatctct tattgcaaca tgtgatacac
     5161 cttgtcgtat atacttttct aatttttgat attcctcaaa tagattttgc aaagtatttt
     5221 caaaaacaat caacttattt tgttgatcat ttaaataatc tacttctcct ccattttgca
     5281 gagaatgaat aactgactcc caaacctttg tctcgttcgt cacaactcct gccttttcaa
     5341 ataccccttt agcaaaggaa tggtcatact ttttatattg gtttattgaa ccatttttta
     5401 attgactaaa tttaaataaa ggcgcaatct ca
//
LOCUS       DANHPA010000128         5402 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.128, whole genome shotgun sequence.
ACCESSION   DANHPA010000128 DANHPA010000000
VERSION     DANHPA010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5402)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5402)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5402
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.128"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            126..365
                     /locus_tag="PTC28_002168"
     CDS             126..365
                     /locus_tag="PTC28_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001656966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717408.1"
                     /translation="MSDNLSLFIDYINDNIIYGSEIKREKLENLFNQFAIKNVEKNIV
                     YDELKSLDITIIESQDSYKNKLKRLFSVLLQSKKI"
     gene            complement(397..1071)
                     /locus_tag="PTC28_002169"
     CDS             complement(397..1071)
                     /locus_tag="PTC28_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001105942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS6-like element IS257 family transposase"
                     /protein_id="HDK5717409.1"
                     /translation="MNYFRYKQFNKDVITVAVGYYLRYTLSYRDISEILRERGVNVHH
                     STVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTLDI
                     WLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSK
                     YLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEI
                     SIMLAS"
     gene            1125..1496
                     /locus_tag="PTC28_002170"
                     /pseudo
     CDS             1125..1496
                     /locus_tag="PTC28_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016912861.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA synthase family
                     protein"
     gene            2333..3076
                     /locus_tag="PTC28_002171"
     CDS             2333..3076
                     /locus_tag="PTC28_002171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphoryl diester phosphodiesterase"
                     /protein_id="HDK5717410.1"
                     /translation="MLTVYGHRGLPSKAPENTIASFKAASEVEGINWLELDVAITKDE
                     QLIIIHDDYLERTTNMSGEITELNYDEIKDASAGSWFGEKFKDEHLPTFDDVVKIANE
                     YNMNLNVELKGITGPNGLALSKSMVKQVEEQLTNLNQNQEVLISSFNVVLVKLAEEIM
                     PQYNRAVIFHTTSFREDWRTLLDYCNAKIVNTEDAKLTKAKVKMVKEAGYELNVWTVN
                     KPARANQLANWGVDGIFTDNADKMVHLSQ"
     gene            3173..3601
                     /locus_tag="PTC28_002172"
     CDS             3173..3601
                     /locus_tag="PTC28_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000872606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HDK5717411.1"
                     /translation="MKYDDFIVGETFKTKSLHITEEEIIQFATTFDPQYMHIDKEKAE
                     QSRFKGIIASGMHTLSISFKLWVEEGKYGEEVVAGTQMNNVKFIKPVYPGNTLYVIAE
                     ITNKKSIKKENGLVTVSLSTYNENEEIVFKGEVTALINNS"
     gene            complement(3647..>5402)
                     /gene="mec"
                     /locus_tag="PTC28_002173"
     CDS             complement(3647..>5402)
                     /gene="mec"
                     /locus_tag="PTC28_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001801873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PBP2a family beta-lactam-resistant peptidoglycan
                     transpeptidase"
                     /protein_id="HDK5717412.1"
                     /translation="IKKVSKNKKRVDAQYKIKTNYGNIDRNVQFNFVKEDGMWKLDWD
                     HSVIIPGMQKDQSIHIENLKSERGKILDRNNVELANTGTAYEIGIVPKNVSKKDYKAI
                     AKELSISEDYIKQQMDQNWVQDDTFVPLKTVKKMDEYLSDFAKKFHLTTNETESRNYP
                     LGKATSHLLGYVGPINSEELKQKEYKGYKDDAVIGKKGLEKLYDKKLQHEDGYRVTIV
                     DDNSNTIAHTLIEKKKKDGKDIQLTIDAKVQKSIYNNMKNDYGSGTAIHPQTGELLAL
                     VSTPSYDVYPFMYGMSNEEYNKLTEDKKEPLLNKFQITTSPGSTQKILTAMIGLNNKT
                     LDDKTSYKIDGKGWQKDKSWGGYNVTRYEVVNGNIDLKQAIESSDNIFFARVALELGS
                     KKFEKGMKKLGVGEDIPSDYPFYNAQISNKNLDNEILLADSGYGQGEILINPVQILSI
                     YSALENNGNINAPHLLKDTKNKVWKKNIISKENINLLTDGMQQVVNKTHKEDIYRSYA
                     NLIGKSGTAELKMKQGETGRQIGWFISYDKDNPNMMMAINVKDVQDKGMASYNAKISG
                     KVYDELYENGNKKYDIDE"
BASE COUNT         1805 a          800 c          903 g         1894 t
ORIGIN      
        1 atattcaagt aattttattg ttttttaatt tgtcgatatt taagttgagt taaatttaaa
       61 gggtgtaatt tgttttacaa tgatgaagat aattagtcta tcaaaataaa ggggttggga
      121 ctgttatgag tgataatttg tcattattca ttgactatat caatgataat ataatctatg
      181 gtagtgaaat caaacgggag aaattagaga atttatttaa tcaatttgct ataaaaaatg
      241 ttgaaaagaa cattgtctat gatgaactga aatctttaga tattacaatc attgagtcac
      301 aggattcata taaaaataaa ttgaagagat tattttcggt tctgttgcaa agtaaaaaaa
      361 tatagctaac cactaattta tcatgtcagt gttcgcttaa cttgctagca tgatgctaat
      421 ttcgtggcat ggcgaaaatc cgtagatctg aagagacctg cggttctttt tatatagagc
      481 gtaaatacat tcaatacctt ttaaagtatt ctttgctgta ttgatacttt gataccttgt
      541 ctttcttact ttaatatgac ggtgatcttg ctcaatgagg ttattcagat atttcgatgt
      601 acaatgacag tcaggtttaa gtttaaaagc tttaattact ttagccattg ctaccttcgt
      661 tgaaggtgcc tgatctgtaa ttaccttttg aggtttacca aattgtttaa tgagacgttt
      721 gataaacgca tatgctgaat gattatctcg ttgcttacgc aaccaaatat ctaatgtatg
      781 tccctctgca tcaatggcac gatataaata gctccatttt ccttttattt tgatgtacgt
      841 ctcatcaata cgccatttgt aataagcttt tttatgcttt ttcttccaaa tttgatacaa
      901 aattggggca tattcttgaa cccaacggta gaccgttgaa tgatgaacgt ttacaccacg
      961 ttcccttaat atttcagata tatcacgata actcaatgta tatcttagat agtagccaac
     1021 ggctacagtg ataacatcct tgttaaattg tttatatctg aaatagttca tacagaagac
     1081 tcctttttgt taaaattata ctataaattc aactttgcaa cagaaccgta ttatggaata
     1141 gagatgttgg taacatttat acaggatcat tatacttaag tttaatttcg ttattacaga
     1201 accacacatt ccaaccagaa gagaaagtat gtctatttag ttatggttca ggagcagtag
     1261 gagaaatctt tagtggttca atcgttaaag gatatgacaa agcattagat aaagagaaac
     1321 acttaaatat gctagaatct agagagcaat tatcagtcga agaatacgaa acattcttta
     1381 acagatttga taatcaagaa tttgatttcg aacgtgaatt gacacaagat ccatattcaa
     1441 aagtatactt atacagtata gaagaccata tcagaacata taagatagag aaataaacta
     1501 gtggccgatt gtgcttgatg agcttgggac ataaatccta actcgaaata aataagcata
     1561 tcactaaact gattttttaa agtttacagt gatatgctta tttttttatc ttacgatttt
     1621 gtacgtgcat gcttgcctag gggtatggct cgagccatta gtctctcgca catactattc
     1681 cctcaggcgt cagcacttac aaaatcggtt gtaattttca tttttatacg cattcttact
     1741 gagattatac taataagagg aatagtaaaa gcaattctaa gtaaaattgc agataagagg
     1801 tttgttaaaa gcagttctaa gtaaaattgc agataagagg tttgttaaaa gcagttctaa
     1861 gtaaaattgc agataagagg tttgttaaaa gcagttctca gtaaaattac agataagagg
     1921 tacgttaaaa gcagttctaa gtaaaattgc agataagagg tacgttaaaa gcagttctag
     1981 gcaaaattgc agataagagg tgcgttaaaa gcagttctca gtaaaattgc tgataagggg
     2041 taagttaaaa gcaatcctaa gtaaaattgc agataagagg taagttaaaa gcaatcctaa
     2101 gtaaaattgc agataagggg tacagaaaaa ctagacttga ttacaaaatg gagcttggga
     2161 cataaatgat tttttaaaaa tgagatgaga cgtagattaa ctccataatc aatacgaatc
     2221 tatcgacttc tttatttatg atattcatct ctttttaatg gaaataaaag tgcgattaat
     2281 gtgataatac agttacgtta attaaaaaaa taaaaatgca aggagaggta atatgctaac
     2341 tgtatatgga catagaggat tacctagtaa agctccggaa aatacaattg catcatttaa
     2401 agctgcttca gaagtagaag gtataaactg gttggagtta gatgttgcaa ttacaaaaga
     2461 tgaacaactg attatcattc atgatgatta tttagaacgg actacaaata tgtccgggga
     2521 aataactgaa ttgaattatg atgaaattaa agatgcttct gcaggatctt ggtttggtga
     2581 aaaattcaaa gatgaacatt tgccaacttt cgatgatgta gtaaaaatag caaatgaata
     2641 taatatgaat ttaaatgtag aattaaaagg tattactgga ccgaatggac tagcactttc
     2701 taaaagtatg gttaagcaag tggaagaaca attaacaaac ttaaatcaga atcaagaagt
     2761 gctcatttca agctttaatg ttgtgcttgt taaacttgca gaagaaatca tgccacaata
     2821 taacagagca gttatattcc atacaacttc gtttcgtgaa gactggagaa cacttttaga
     2881 ttactgtaat gctaaaatag taaacactga agatgccaaa cttactaaag caaaagtaaa
     2941 aatggtaaaa gaagcgggtt atgaattgaa cgtatggact gtaaacaaac cagcacgtgc
     3001 aaaccaactt gctaattggg gagttgatgg tatctttaca gacaatgcag ataaaatggt
     3061 gcatttgtct caatagaaag ttagaggtga gtcttacgtt tcagtgacgg tagacttacc
     3121 tttaacatgt tacatactaa aaaattaatt tgaataagaa agagagacat atatgaaata
     3181 cgatgatttt atagtaggag aaacattcaa aacaaaaagc cttcatatta cagaagaaga
     3241 aattatccaa tttgcaacaa cttttgatcc tcaatatatg catatagata aagaaaaagc
     3301 agaacaaagt agatttaaag gtatcattgc atctggcatg catacacttt caatatcatt
     3361 taaattatgg gtagaagaag gtaaatacgg agaagaagtt gtagcaggaa cacaaatgaa
     3421 taacgttaaa tttattaaac ctgtataccc aggtaataca ttgtacgtta tcgctgaaat
     3481 tacaaataag aaatccataa aaaaagaaaa tggactcgtt acagtgtcac tttcaacata
     3541 caatgaaaat gaagaaattg tatttaaggg agaagtaaca gcacttatta ataattcata
     3601 ataaaacagt gaagcaacca tcgttacgga ttgcttcact gttttgttat tcatctatat
     3661 cgtatttttt attaccgttc tcatatagct catcatacac tttacctgag attttggcat
     3721 tgtagctagc cattccttta tcttgtacat ctttaacatt aatagccatc atcatgtttg
     3781 gattatcttt atcatatgat ataaaccacc caatttgtct gccagtttct ccttgtttca
     3841 ttttgagttc tgcagtaccg gatttgccaa ttaagtttgc ataagatcta taaatatctt
     3901 ctttatgtgt tttatttacg acttgttgca taccatcagt taatagattg atattttctt
     3961 tggaaataat atttttcttc caaactttgt ttttcgtgtc ttttaataag tgaggtgcgt
     4021 taatattgcc attattttct aatgcgctat agattgaaag gatctgtact gggttaatca
     4081 gtatttcacc ttgtccgtaa cctgaatcag ctaataatat ttcattatct aaatttttgt
     4141 ttgaaatttg agcattataa aatggataat cacttggtat atcttcacca acacctagtt
     4201 ttttcatgcc tttttcaaat ttcttactgc ctaattcgag tgctactcta gcaaagaaaa
     4261 tgttatctga tgattctatt gcttgtttta agtcgatatt accatttacc acttcatatc
     4321 ttgtaacgtt gtaaccaccc caagatttat ctttttgcca acctttacca tcgattttat
     4381 aacttgtttt atcgtctaat gttttgttat ttaacccaat cattgctgtt aatatttttt
     4441 gagttgaacc tggtgaagtt gtaatctgga acttgttgag cagaggttct tttttatctt
     4501 cggttaattt attatattct tcgttactca tgccatacat aaatggatag acgtcatatg
     4561 aaggtgtgct tacaagtgct aataattcac ctgtttgagg gtggatagca gtacctgagc
     4621 cataatcatt tttcatgttg ttataaatac tcttttgaac tttagcatca atagttagtt
     4681 gaatatcttt gccatctttt ttctttttct ctattaatgt atgtgcgatt gtattgctat
     4741 tatcgtcaac gattgtgaca cgatagccat cttcatgttg gagcttttta tcgtaaagtt
     4801 tttcgagtcc ctttttacca ataactgcat catctttata gcctttatat tctttttgtt
     4861 ttaattcttc agagttaatg ggaccaacat aacctaatag atgtgaagtc gcttttccta
     4921 gaggatagtt acgactttct gtttcattag ttgtaagatg aaattttttt gcgaaatcac
     4981 ttaaatattc atccattttt ttaacggttt taagtggaac gaaggtatca tcttgtaccc
     5041 aattttgatc catttgttgt ttgatatagt cttcagaaat acttagttct ttagcgattg
     5101 ctttataatc ttttttagat acattctttg gaacgatgcc tatctcatat gctgttcctg
     5161 tattggccaa ttccacattg tttcggtcta aaattttacc acgttctgat tttaaatttt
     5221 caatatgtat gctttggtct ttctgcattc ctggaataat gacgctatga tcccaatcta
     5281 acttccacat accatcttct ttaacaaaat taaattgaac gttgcgatca atgttaccgt
     5341 agtttgtttt aattttatat tgagcatcta ctcgtttttt atttttagat acttttttta
     5401 tt
//
LOCUS       DANHPA010000129         5401 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.129, whole genome shotgun sequence.
ACCESSION   DANHPA010000129 DANHPA010000000
VERSION     DANHPA010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5401)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5401)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5401
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.129"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(133..1410)
                     /gene="sucB"
                     /locus_tag="PTC28_002174"
     CDS             complement(133..1410)
                     /gene="sucB"
                     /locus_tag="PTC28_002174"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HDK5717413.1"
                     /translation="MAEVKVPELAESITEGTIAEWLKQVGDTVEKGEAILELETDKVN
                     VEVVSEEEGTIQELLAEEGDTVEVGQAIAIVGEGGAATSSSDDSKTDSKDAPNKSEQK
                     ASDKQEQKEEKSSSDKESQSSPSNERINATPSARRAAREKGISLSEVSGKANDVVRKE
                     DVERGSQQKSTGAAQSKEKEAATPQAPKTPSKPVIREKMSRRKQTAAKKLLEVSNNTA
                     MLTTFNEVDMTNVMALRKRKKDKFMEDHDGTKLGFMSFFTKAAVAALKRYPEVNAEID
                     GDYMVTKQYYDIGIAVSTPGGLLVPNVRDCDKKNFAEIEQEIANLASKARDNKLTLDD
                     MMNGSFTITNGGIFGSMMSTPIINGSQAAILGMHSIITRPVAIDQDTIENRPMMYIAL
                     SYDHRIIDGKEAVSFLKMIKELIENPEDLLLES"
     gene            complement(1425..4214)
                     /locus_tag="PTC28_002175"
     CDS             complement(1425..4214)
                     /locus_tag="PTC28_002175"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002493623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HDK5717414.1"
                     /translation="MMKNDKQVTEAPVNFGTNLGLILELYDQFLEDPSSVTEDLQVLF
                     STIKDGEATTSSTTESSSGDSTIKRVMRLIDNIRQYGHLEADIYPVNAPERTNIPKLK
                     PEDFNLDQATLENISAEIVSDHFKDIYDNAYEAIERMEERYKGPIAFEYTHINNNKER
                     IWLKRRIETPYKASLNKEEKINLFKLLAHVEGFEKYLHKNFVGAKRFSIQGVNTLVPM
                     ITQTIKRAAEEEISNIQIGMAHRGRLNVLTHVLQKPYEMMLSEFMHTDPMKFLPEDGS
                     LSITSGWTGDVKYHLGGVKTINNHGIEQKITLANNPSHLEVVAPVVTGRTRAAQDQTD
                     YAGKVQTDFSNAMPIIVHGDAAYPGQGVNFETMNLGNLDGFSTGGTLHIITNNRIGFT
                     TDPEDGRSTTYATDVAKGYDVPIMHVNADNVEATIEAIDIAMEFRKAFNKDVVIDLVG
                     YRRFGHNEMDEPTLTNPLPYKQIQKHDTSEVIYGKQLIDEGIMSQDEMDEVMENVQKE
                     MRSAHDKIDKNDKNDNTDMSIPDSIAQPLKSNESELSYDRLKEINDAMFNYPEGFNVF
                     KKLNRILEQRKQPFESEEGLVDWAHAEQLAFATVMQEGTPIRMTGQDSERGTFSHRHA
                     VLHDQENGDTFTPLQHVPDQKATFDIHNSPLSEAAVVGFEYGYNVQNPSSFNIWEAQF
                     GDFANMAQMYFDNFIFSGNAKWGESSGLTFLLPHSFEGQGPEHSSARLERFLQLAAEN
                     NMTICNLSSSANYFHLLRAQAASLGTDAMRPLVVMSPKGLLRNKTVAQPISAFTSGGF
                     EPILPEAHDAKKIKKVILASGKMFIDLKEKLANSPNEAILLIAVERLYPFPEEEIRSV
                     VETLSNLKTVAWVQEEPQNQGAWHYAYPMLRDIIGDQYELTYHGRKHRAAPAEGDGEI
                     HKLVQNNIIENSLNI"
     gene            complement(4306..>5401)
                     /locus_tag="PTC28_002176"
     CDS             complement(4306..>5401)
                     /locus_tag="PTC28_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GHKL domain-containing protein"
                     /protein_id="HDK5717415.1"
                     /translation="NVSTTNVKFTPPFQAYDTRNIKILRTDKGSFIIVSTPINTPYFK
                     GHAIIVHSLKEYDDLLNFITYLALTFGLIALFVTASLSYFFSSQITQPINIITEKMTQ
                     IRRNGFQEKLEVPTNYEETDALIDTFNSMMMKLESSFNQQRQFVEDASHELRTPLQII
                     QGHLNLIQRWGKKDPDILEESLNISIEEMNRITKLVEELLLLTKDDTRSTENQTEKVD
                     VNNEIRSRLHALQQIHPDYQLDFHTSQDFIYLEINSFHLEQILLIFLDNAIKYDTQNK
                     HISIETKLISNQVVIKITDRGLGIPQADQEHIFDRFYRVDKSRSRQQGGNGLGLSIAH
                     KMVTLYHGRISVESEVGYFTTFTISFDSCG"
BASE COUNT         1452 a         1043 c         1000 g         1906 t
ORIGIN      
        1 gaggtgttat aaaatttaga tgatttctac atttttagtt cactcaaaaa gcatagccca
       61 atttaatcaa ttgactagag attataaaaa agagagaaac ctattacaga tttctctcta
      121 aacccgaaac gattaagact ctaataataa atcttcaggg ttttcaatta actctttaat
      181 catcttcaag aaacttacag cttcttttcc gtcgataatt ctatggtcat aacttaatgc
      241 gatgtacatc attgggcggt tttcaatcgt atcttgatca atcgcaaccg gtctcgtaat
      301 aatagagtgc atacctaaaa ttgcagcttg actaccattg ataatcggtg ttgacatcat
      361 tgaaccgaaa ataccaccat ttgtaattgt gaatgagccg ttcatcatgt catccagtgt
      421 caatttgtta tcacgtgctt ttgacgctaa gttggcaatt tcttgctcaa tttcagcaaa
      481 gttcttctta tcgcaatctc taacgtttgg tacgagtaaa ccgcctggtg tagacacggc
      541 aataccgata tcgtagtatt gttttgtaac catgtagtcg ccatcgattt cagcgttcac
      601 ttcagggtaa cgcttcaatg cggcaaccgc tgcttttgtg aagaatgaca tgaagccaag
      661 tttcgtgccg tcgtgatctt ccataaattt atctttttta cgttttcgga gcgccatcac
      721 gttcgtcatg tctacttcat tgaatgtcgt taacattgca gtgttattgc ttacttctaa
      781 taatttttta gctgcagttt gttttctacg actcattttt tcacgaatta ctggttttga
      841 tggtgtttta ggtgcttgtg gtgtagcagc ttctttttct ttagattgag cagcacctgt
      901 tgatttttgt tgtgagccgc gttcaacatc ttctttacga acgacatcat ttgctttgcc
      961 actcacttcg cttaagctaa tgcctttttc acgtgccgcg cgacgtgctg aaggtgttgc
     1021 attaatgcgt tcgtttgaag gactgctttg gctttctttg tcagaagatg atttttcttc
     1081 tttctgctct tgtttgtctg acgctttttg ttctgattta tttggcgcgt cttttgagtc
     1141 agtttttgaa tcatcacttg aagatgtagc agcgccacct tcacccacta ttgcaatggc
     1201 ttggccgact tctactgtgt cgccttcttc agcaagtaac tcttgaattg taccttcttc
     1261 ttcagaaacg acttcgacat tcactttgtc tgtttctaat tcaaggatgg cttcaccttt
     1321 ttcaacagtg tcacctactt gttttaacca ttctgcaatg gtaccttctg taatcgattc
     1381 tgctaattct ggaactttta cctctgccat ttttcctatg ccccctaaat atttaagcta
     1441 ttttcaatga tattattttg aacaagttta tgaatttcac catcaccctc ggcaggtgca
     1501 gctctatgtt ttctaccgtg atacgtcaat tcgtattgat caccaatgat gtctctcaac
     1561 attggataag cataatgcca tgccccttgg ttttgcggct cttcttgaac ccatgcgact
     1621 gttttaaggt ttgaaagtgt ttcaacaact gatcgaattt cttcttctgg gaaaggatag
     1681 agtcgttcaa cagctataag taaaatcgct tcgtttggtg aattggctaa tttttctttc
     1741 aagtcgataa acattttgcc tgatgcgaga atgacttttt taatcttttt agcgtcgtgt
     1801 gcttctggga gtattggttc aaaaccacca gatgtaaatg cactgatcgg ttgtgcgact
     1861 gttttattac gtaataaacc ttttggagac atgacaacta atggtctcat tgcgtcagtt
     1921 cctaggcttg ccgcttgggc acgcaataag tggaagtagt tggctgagct tgataagtta
     1981 caaatagtca tgttgttttc agctgccaat tgtaagaaac gctctaaacg tgctgatgaa
     2041 tgttcaggtc cttgtccttc aaatgaatgt ggcaataaga acgttaaacc tgatgattcg
     2101 ccccattttg cattaccaga gaaaatgaag ttgtcaaaat acatttgagc catattcgca
     2161 aagtcaccaa actgtgcttc ccaaatgtta aatgatgacg gattttgaac attataacca
     2221 tattcaaagc ctacaactgc agcttctgat aatggagagt tatgaatgtc gaacgtcgct
     2281 ttttgatcgg gtacatgttg taatggcgta aatgtgtcgc cattttcttg gtcatgtaac
     2341 actgcatgac gatggctaaa tgtaccacgt tcagaatctt gacctgtcat acgaattggc
     2401 gtcccttctt gcatgactgt cgcaaatgct agctgttcgg catgtgccca atccactaaa
     2461 ccttcttcac tttcaaatgg ttgcttacgt tgttcaagaa tacgatttaa ttttttgaaa
     2521 acattgaaac cttctggata gttaaacatt gcatcgttaa tttcttttaa gcgatcatat
     2581 gacagttcag actcattact ttttaaaggt tgtgcgatac tatcaggaat gctcatatcc
     2641 gtattgtcat ttttatcgtt tttatcgatt ttgtcatgcg ctgatcgcat ttctttttga
     2701 acgttttcca tcacttcgtc catttcatct tggctcataa tgccttcgtc tataagttgt
     2761 ttaccataaa tcacttcaga cgtatcatgt ttttgaattt gtttatatgg taatgggttc
     2821 gttaatgtag gctcgtccat ttcattatga ccgaaacgac ggtaaccaac taagtcaatc
     2881 acgacatctt tattgaatgc ttttctaaat tccattgcaa tatcaatcgc ttcaatagtt
     2941 gcttcaacat tgtcagcatt cacatgcata atcggtacat catacccttt agccacatct
     3001 gtcgcatacg ttgttgaacg tccgtcttct ggatctgttg tgaatccgat acggttattc
     3061 gtaataatgt gcaatgtacc acctgttgag aacccatcta aattaccaag gttcattgtt
     3121 tcaaagttca caccttgacc agggtatgca gcatcaccat gaacgataat cggcattgca
     3181 tttgaaaaat cagtttgcac tttacccgca tagtccgttt ggtcttgtgc cgctctcgta
     3241 cggcctgtca ctactggcgc aacgacttca agatgacttg ggttatttgc taacgtgatt
     3301 ttttgttcaa taccatggtt attgatcgtt ttaacgccac ctaagtgata tttaacgtca
     3361 cctgtccaac ctgaagtgat agataagcta ccatcttctg gtaaaaattt cattggatct
     3421 gtatgcataa attctgaaag catcatctca tatggctttt gtaacacgtg cgttaaaaca
     3481 tttaaacgtc cacggtgtgc cataccgatt tgaatgtttg aaatttcttc ttcagcagca
     3541 cgtttaattg tttgagtgat cataggtacg agggtattga cgccttggat tgaaaatctt
     3601 tttgcaccta caaagttctt gtgaaggtat ttctcaaagc cttcaacgtg tgccagaagt
     3661 ttgaaaagat tgattttttc ttctttatta aggcttgctt tatatggtgt ttcaatacga
     3721 cgttttagcc atatacgttc tttattatta ttaatatgtg tatattcgaa agcaattggc
     3781 cccttataac gttcttccat acgttcaata gcttcatagg cattatcgta aatgtcttta
     3841 aaatgatcag agacgatttc agctgaaatg ttttctaaag ttgcttgatc taagttaaag
     3901 tcttctggct ttaatttagg aatatttgta cgctctggtg cattcactgg ataaatatca
     3961 gcttctaaat gaccgtattg tctaatatta tcgattaaac gcatcacacg cttgatcgta
     4021 ctatctcctg agcttgattc ggttgttgat gatgttgtcg cttcaccatc tttaattgta
     4081 ctaaagagaa cttgtaaatc ttcagtcact gaactaggat cttctaaaaa ttgatcatat
     4141 aattctaaaa tgagtcctaa atttgtgccg aagtttacag gtgcctctgt cacctgttta
     4201 tcgttcttca taatccaccc tccacagaaa aaaataaaaa cgcttacagg tcaataatag
     4261 cattaaaatg tgaacattta aaggcaaaaa gccagataat tgtactcatc cgcacgaatc
     4321 aaaactgata gtaaatgttg taaaataccc gacttcgctc tcgactgaaa ttcggccatg
     4381 atataacgtc accattttat gggcaataga gagtcctaaa ccgtttccgc cttgctgacg
     4441 ggagcgtgat ttgtctacac gatagaagcg gtcaaagatg tgttcttgat ctgcttgagg
     4501 gatacctaag ccacggtctg taattttaat cacgacttga ttgctgatga gtttcgtttc
     4561 aatagaaata tgcttatttt gtgtgtcata tttaatcgcg ttatcaagaa aaataagcaa
     4621 aatttgttct aagtgaaatg agttaatctc taggtatata aagtcttgac tcgtatgaaa
     4681 gtcgagttga taatctggat gaatttgttg tagtgcatga agacgacttc taatttcatt
     4741 attcacatcg actttttcag tttgattttc agttgacctt gtatcatctt tagtgagtag
     4801 cagtaattct tcaacgagtt tcgtaatccg attcatttcc tcgatggaga tattcagaga
     4861 ctcttctaaa atgtcaggat cctttttacc ccagcgctga attaaattta agtgtccttg
     4921 gataatttga agtggtgtac gtaattcgtg tgaagcatct tctacaaatt gacgttgttg
     4981 gttaaatgaa ctctccagtt tcatcatcat actgttaaaa gtatcgataa gggcatctgt
     5041 ttcttcataa ttggttggga cttcaagttt ttcttggaaa ccattacgcc gaatttgtgt
     5101 catcttttca gtaataatat taatcggttg agtaatttga gatgaaaaga aataactgag
     5161 tgatgcggtt acaaataatg caatgagtcc aaatgttagg gcgagatacg ttatgaagtt
     5221 taataaatca tcgtactctt ttaatgaatg gacaatgatt gcgtgtcctt taaaataagg
     5281 cgtattaatc ggtgtcgata cgatgatgaa tgagccttta tctgtgcgca aaattttaat
     5341 attacgtgta tcataagctt gaaacggtgg tgtgaatttc acattcgttg tactgacatt
     5401 t
//
LOCUS       DANHPA010000130         5396 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.130, whole genome shotgun sequence.
ACCESSION   DANHPA010000130 DANHPA010000000
VERSION     DANHPA010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5396)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5396)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5396
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.130"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            330..3122
                     /locus_tag="PTC28_002177"
     CDS             330..3122
                     /locus_tag="PTC28_002177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002511775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HDK5717416.1"
                     /translation="MVYQSEFALEKEMMAQLKSNGYEPMTIRNEQQLLDNFRQILNER
                     HADKLEGKLLSDKEFQRLLTMINGKGIFESARILRDKLPLKRDDESEVYLSFLDTRHW
                     CKNTFQVTNQIAVDDQYKARYDVTLLVNGLPLAQIELKRRGMDINQAFNQVRRYRKHN
                     YTGLFRYIQLFIISNGIETRYLSNNDGEFLKSHMFYWSDKDNHRINTLSDFTDTFLRP
                     CHLAKMISRYMILNETDHVLMAMRPYQVHAVEALIQQATETNSNGYIWHTTGSGKTLT
                     SFKASQVLSEQENIKKVIFLVDRKDLDSQTEEEFNKFSKGSVDKTNNTSQLVKQLNDK
                     SLPLIVTTIQKMSKAIQNNAAALEQYKTDKVVFIIDECHRSQFGDMHRIVRQHFNNAQ
                     YFGFTGTPRFEENKSIDGRSTADIFGRNLHAYLIKNAIHDGNVLGFSVDYINTIKAQH
                     IRTETDDLVEGINKDEVWLADKRIELIARHIRDNHDKYTRNRQYSAILTVQSIPALIK
                     YYETFKRISRDDDHPLKVAGIFTYAANEALQETRVHEVHSRDQLELMMQDYNAHFGTN
                     FTTDTFPEYFNHVSKNVKKGVKDNKIDVLIVVNMFLTGFDSKVLNTLYVDKNLKYHDL
                     IQAYSRTNRVEKETKPFGKIVNYRNLKRNTDKALKLFSQTDDTDRVLLKSYEAYKEEF
                     IEALAALKSIAPTPQAMDEVFDEEGKKAFVEAFRLVSKLVLRLKAFEEFEFTTDNIGM
                     DEQEFADYRGKYYAIYDEVKSKRGNVEQVSILDDIDFEIEILRNDLINVSYIMHLIRQ
                     IDLKDTGEQQRNREQIRRILDNADDPVLRLKRDLIREFIDEVVPQLTEDDNIDEAYIL
                     FENAKREAEFNQFAHQQAVDEDILKSMTGEFEYSGIVNQADLKDLVSDKKLKEKRQTK
                     KAIISFIEEVTEKYSS"
     gene            3566..5122
                     /locus_tag="PTC28_002178"
     CDS             3566..5122
                     /locus_tag="PTC28_002178"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000028656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HDK5717417.1"
                     /translation="MSITEKQRQQQAELHKKLWAISNDLRGNMDASEFRNYILGLIFY
                     RFLSEKAEAEVAEALSGEDMTYEEAWADPEYREDLKGELLFTVGYYIEPQDLFSTMVK
                     EIENQRFDIEHLAQAIRKVETSTLGQNSEEDFIGLFSDMDLSSTRLGNTVKDRTALLS
                     KVMVNLADLPFVHSDMEIDMLGDAYEFLIGRFAANAGKKAGEFYTPQQVSKILAQIVT
                     LGKDKLRNVYDPTCGSGSLLLRVGKETKVYRYYGQERNNTTYNLARMNMLLHNVRYEN
                     FDIQNDDTLENPAFLGEQFDAVVANPPYSAKWSADSKFNDDDRFSGYGKLAPKSKADF
                     AFIQHMVHYLDDEGTMAVVLPHGVLFRGAAEGVIRQYLIEEKNYLDAVIGLPANIFYG
                     TSIPTCILVFKKCRKADQDVLFIDASNAFEKGKNQNHLTDEHVDKIINTYKNRATIDK
                     YSYAATLLEIEDNDYNLNIPRYVDTFEEEAPIDLDQVQQDIANIDNDIAQIEQDIEGY
                     LKELGVLQHD"
     gene            5115..>5396
                     /locus_tag="PTC28_002179"
     CDS             5115..>5396
                     /locus_tag="PTC28_002179"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDK5717418.1"
                     /translation="MTDLKKNVPELRFPEFEGEWEEKKISDSIKILKSGLSRELSAND
                     IGLPVIRANNLQDYRLVLDDVKYWYKEDPQGANTAKYLLEKNDILINFIN"
BASE COUNT         1884 a          919 c         1121 g         1472 t
ORIGIN      
        1 agaccctcta caaatattaa aaataaaaat tactgattat gatgatgcaa agatgagaaa
       61 atattataaa agtatagaga aagaaataaa acaagccaaa aatcgagaat tctattaaat
      121 atttctcgat gcttaatatg ataattcatt tgtcagaaac tccgcaactt gtcgacatgc
      181 tctaaaatac accaaacccc ttcaaaacaa tcatgaaaca ccatatttca cattcttatc
      241 gttaaaacgc aaataaatat aaaaatccca ccacacaaat gcataatata ttataataag
      301 tcgtaagaga aacaaaggta ggggatctta tggtttacca aagtgaattc gcattagaaa
      361 aagaaatgat ggcacaatta aaatccaatg gctatgaacc tatgaccatt cgaaatgaac
      421 agcagctatt ggataatttt cgtcaaattt taaatgaacg ccatgcagat aaattagaag
      481 gcaagctact gtcagataaa gaatttcaac gcttgttaac gatgatcaat ggtaaaggca
      541 tctttgaaag tgcgcgtatt ttacgtgata aattgccttt gaagcgtgat gatgagtctg
      601 aggtgtattt gtcgttttta gatacacgcc attggtgtaa aaatacgttc caagtgacga
      661 atcaaatcgc agttgacgat cagtataaag cgcgttatga tgtgacgctt ttagtgaatg
      721 gattgccgct tgcgcaaatc gaattgaaac gacgcggtat ggatattaac caagcgttca
      781 accaagtgag acgttatcgt aaacataatt acaccggttt gttccgttat attcagttgt
      841 ttattattag taacgggatt gaaacgcgct atctgtctaa taatgatggc gaatttttaa
      901 aaagtcacat gttttattgg agcgacaaag acaatcaccg catcaatacg ttaagtgact
      961 ttacggatac ttttttaaga ccgtgtcatc tcgctaaaat gatttcacgt tatatgattt
     1021 taaatgaaac ggatcatgtt ttaatggcga tgcgtcccta ccaagtgcat gctgtggaag
     1081 cgctgatcca gcaagcgact gaaacgaata gtaatggtta tatttggcat acgaccggaa
     1141 gtggtaaaac gttgacgtcc tttaaagcga gtcaagtcct gtcagaacaa gagaatatta
     1201 aaaaagtgat tttccttgta gaccgtaaag acttagatag tcaaacagaa gaagagttta
     1261 ataagttttc taaaggatcg gtggataaaa cgaacaatac gtcacagctc gtgaaacagt
     1321 tgaatgataa aagtttgccg ctgattgtca caacgattca aaaaatgtca aaagcgattc
     1381 aaaataatgc ggcggcgctc gaacaataca aaacggataa agtggtgttc attattgacg
     1441 aatgtcaccg gagtcaattt ggcgacatgc atcggattgt gcgtcaacat tttaacaatg
     1501 cgcaatactt tggttttaca ggaacgccgc gctttgaaga aaataaaagc atcgatggtc
     1561 ggagtacagc agacattttt ggacgtaact tgcatgcgta tttaatcaaa aatgcgattc
     1621 acgatggtaa tgttttaggt ttttctgtcg attacattaa tacgataaaa gcgcaacata
     1681 ttcgtacaga aactgatgat ttggtggaag ggattaataa agatgaagtg tggttggcag
     1741 ataagcgcat tgagttaatt gcccgtcata ttcgagataa ccacgataaa tatacacgca
     1801 atcgacagta ttcggcgatt ttaacagtcc aaagtatccc ggcattgatt aaatattatg
     1861 agacgttcaa acgaatcagt cgtgatgatg accatccatt aaaagtggca ggcatattta
     1921 cgtatgcagc aaatgaagcg ctacaagaga cgcgtgtaca tgaagtccat tcgagagatc
     1981 aattagagct gatgatgcaa gactacaatg cgcattttgg gacgaatttt acgacggata
     2041 cattcccgga atatttcaat catgtctcta aaaacgtgaa aaaaggtgta aaggataata
     2101 aaattgacgt gctgatcgtt gtgaatatgt ttttaacggg atttgacagt aaagtattga
     2161 acacgctata tgttgataaa aacttgaaat atcatgacct catccaagca tattctcgta
     2221 cgaaccgtgt ggagaaagaa acaaagccat tcggaaaaat tgtcaattac cgcaacttaa
     2281 aacgcaatac ggataaagcg ttaaaactgt tctcgcaaac ggatgataca gatcgtgtgc
     2341 ttctgaaaag ttatgaagca tacaaagaag agtttatcga agcgttggca gcgttaaagt
     2401 ctatcgcacc aacacctcaa gcgatggatg aagtgtttga tgaagaaggc aaaaaggcgt
     2461 ttgtcgaagc attccgtctc gtgtcaaaac ttgtgttgcg acttaaagcg tttgaagagt
     2521 tcgagtttac cactgacaat attggcatgg acgaacaaga atttgcggat tatagaggta
     2581 aatactatgc catttatgat gaagtaaaat ccaaacgtgg caatgtggaa caagtgtcta
     2641 ttttggatga catcgatttt gaaattgaaa ttttacgtaa tgacctgatt aatgtgtcgt
     2701 atattatgca tctcattcgt caaatcgact tgaaggatac cggcgaacaa caacgtaatc
     2761 gtgaacagat tcgacgtatt ttagataatg cggacgatcc agtgttacgt ttgaagcggg
     2821 atttaatacg ggaatttatt gatgaagtgg tgcctcaatt aacagaagat gacaacatag
     2881 atgaagcgta tattttattt gaaaatgcga aacgagaagc agaatttaat caatttgcac
     2941 atcaacaagc ggtcgatgaa gatattttga aatccatgac aggcgaattt gaatatagtg
     3001 gtatcgtgaa ccaagcggac ctcaaagatt tagtcagtga taaaaagttg aaagaaaaac
     3061 gacaaacaaa aaaggcgatt atttcattta ttgaagaagt tacagaaaaa tatagtagtt
     3121 agaacatcat caaagggatg ggacacaaaa atttttgata ctattgataa ggtattttat
     3181 ttaacttgcc ctcaatgatt tttagctttg attgccttct aggcttcctt ttcctagggg
     3241 ctggcccttc aactaaattc ggcttgattg aagcatacat aagatggaag ccgaattgga
     3301 ttttccggac cagctgatcc ctcaggagtg tcagccttct aggcaatctg acatcaaata
     3361 caggaaacag agggcaagtt tatgaaatca tgaaaaccaa tagcatccat tttttgtatc
     3421 ccattcaacc tcattttttc gactgcttta aaatcattaa tgaattataa atctatgaat
     3481 ggattgaggc taaaaaaagt tatgtcccaa tccctttgat atttttgtgc acgcatacag
     3541 ttattgaact aatggaggaa atgcaatgtc aattacagaa aaacagcgcc aacaacaagc
     3601 tgaattacat aaaaaattgt gggctatctc gaatgactta agagggaaca tggatgcgag
     3661 cgagttccga aattatattt tagggcttat tttttatcgc ttcttatctg aaaaggcaga
     3721 agcagaagtt gcggaagcct tatctggaga ggacatgaca tacgaagaag cgtgggcaga
     3781 tccagagtat cgagaagact taaaaggtga attgttattt acagttggct actacatcga
     3841 gccacaagat ttgtttagca caatggtaaa ggaaattgaa aaccaacgct ttgatattga
     3901 acatttagcg caagcgattc gtaaagttga aacgtcaacg ctcggacaaa acagtgaaga
     3961 agacttcatt gggctattca gtgacatgga tttaagttcc acacgtctcg gcaatacagt
     4021 gaaagaccgt acagcgttat taagtaaagt gatggtgaac ttagcggact tgccatttgt
     4081 tcatagcgac atggaaattg acatgttagg ggatgcgtac gagtttttaa tcggacgttt
     4141 cgcggcaaat gcgggtaaaa aagcaggcga gttctatacc ccacaacaag tatcgaaaat
     4201 tttagcgcaa atcgtcacat taggaaaaga taaattgaga aatgtatacg acccaacatg
     4261 tggttcaggt tccttactgt tacgtgtcgg taaagaaacg aaagtatacc gttactatgg
     4321 acaagaacgt aacaatacga cgtacaactt agcacgcatg aacatgttgt tacacaatgt
     4381 gcgttatgaa aacttcgaca ttcaaaatga cgatacactc gaaaaccctg cctttttagg
     4441 tgagcaattt gatgccgtgg tagccaatcc gccgtacagt gcgaaatggt cagcggatag
     4501 taaattcaat gacgatgacc gtttcagtgg ttacggtaaa cttgcgccga aatcaaaagc
     4561 tgacttcgct tttatccaac atatggtcca ctatttagac gatgaaggta caatggcagt
     4621 cgtattacca catggtgtcc tattccgtgg tgcagcagaa ggggtcatcc gtcaatatct
     4681 cattgaagag aaaaattact tggacgctgt catcggttta cccgcgaaca ttttctacgg
     4741 cacaagcatt ccgacatgta ttttagtctt caaaaaatgt cgtaaagccg accaagatgt
     4801 gttatttatt gatgcatcca acgcgttcga aaaaggcaaa aaccaaaacc acctgacaga
     4861 cgagcacgtg gacaaaatta tcaacacata taaaaacaga gcaaccattg ataaatatag
     4921 ttatgccgca acattgctag aaattgaaga caatgactac aatctcaata tcccacgata
     4981 cgttgataca ttcgaggaag aagcaccgat tgaccttgac caagtccaac aagacatcgc
     5041 gaacatcgac aatgacatcg cacaaatcga acaagacatc gagggctatt tgaaagaatt
     5101 aggagtgttg cagcatgact gatttaaaga aaaatgtgcc agagttacga tttcctgagt
     5161 ttgaaggtga gtgggaagag aagaaaattt ctgattctat aaaaatattg aaaagtggat
     5221 tatcgagaga gttatcggca aatgatattg gtttaccagt tataagagca aacaatttgc
     5281 aagattatcg tttagtttta gatgatgtta agtactggta taaagaagac ccacaaggcg
     5341 caaatacagc aaaatatctt ttagaaaaaa atgatatatt aatcaatttt attaat
//
LOCUS       DANHPA010000131         5308 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.131, whole genome shotgun sequence.
ACCESSION   DANHPA010000131 DANHPA010000000
VERSION     DANHPA010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5308)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5308)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5308
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.131"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(28..1242)
                     /locus_tag="PTC28_002180"
     CDS             complement(28..1242)
                     /locus_tag="PTC28_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5717419.1"
                     /translation="MKTARQLFRERLNAERKEKNYYNKFIFNGHFSVFLVILLGAFIL
                     GYSQWLKNVPEDINYALWVSMVLSITSIFPLKTLLEDADRLFLLPFERQMKAYMRDSI
                     IFSYLSRLPLQILMLIVFYPLIHTVYPERMAAFIVTSVLAIILPLVGLCLKWEWYRYR
                     LENWSIQLVLFIFNLGGYYVMLETSHLSAIIAVVGIIALCVLLNRLNVNQLFPWESMI
                     KHAHQHRINYYKFVNMFTDVKGMQEQAVRRRYLDFLLKTPKPFDSTQLYPFLFKRNFL
                     RGKDALNMTLRLVVICAFIMIWLNHPWVNAVIGSLAMYIIVLQMSQFYTQEAYSLWPQ
                     VWPVSELYVIEGYRKFLQQTVLIIGILFSIVYVLLHVAQFYFIIFFFIVGYFTIRSTI
                     KKLKYQESLLKD"
     gene            complement(1239..1976)
                     /locus_tag="PTC28_002181"
     CDS             complement(1239..1976)
                     /locus_tag="PTC28_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5717420.1"
                     /translation="MTVQIKNLTGGYGKKPIIKNINFELTDGEIVGLIGLNGAGKSTT
                     IKHILGLLTPTEGDMSISGINIKEDIHAYRQHLSYIPEAPVIYDALTLKEHIEMTAMA
                     YSIDYDTAMARALPLLKTFRLEDQLHIFPSHFSKGMKQKVMIICAFIVEPDFYIIDEP
                     FLGLDPIGIQSMLDLMASKKEEGRTVLMSTHILATAERYCDRFIILDQGEIVAMGNLE
                     ALRHQTAMPHATLDEIYIHVTKGAQSS"
     gene            2112..2537
                     /locus_tag="PTC28_002182"
     CDS             2112..2537
                     /locus_tag="PTC28_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HDK5717421.1"
                     /translation="MTETIFSKIIDGDIPSFKVYENDYVYAFLDISQVSKGHTLLIPK
                     TPSPNIYETDAETMKHIGEALPIVANAIKKTFNPDGLNIIQNNGEYASQSVFHIHFHL
                     IPRYKNDIDGFGYHWETNESRIDDAQKAEIAAQIASNIE"
     gene            2615..2971
                     /locus_tag="PTC28_002183"
     CDS             2615..2971
                     /locus_tag="PTC28_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HDK5717422.1"
                     /translation="MKIVRMTLGVVAGVATGLGVALVARDGQTRIANPKAARPKTELE
                     LEVDTMKNSIHDIKRYIAQIKNESQSFAGSIGDEVKTMIGEFKADINPNIKQLQSHIE
                     NIQNRGEEMTNFPTKK"
     gene            3073..3603
                     /locus_tag="PTC28_002184"
     CDS             3073..3603
                     /locus_tag="PTC28_002184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator Hpr"
                     /protein_id="HDK5717423.1"
                     /translation="MNDRQAQIEGMLYTHKIAMLSKVLWKNAESDWQRWLKKSGIAMN
                     EHLILLTLYAFGRATISDISKYGVMHVSTAYNFAKRLEQQALLNMEKDHNDKRNTYIT
                     LTDKGKALVDEIFEQYDETQNKIYNASKDFQTEMFHLPSFSDVHYLVAKLHGKDFIND
                     VNLCQSHIRENLLDEQ"
     gene            3652..4218
                     /locus_tag="PTC28_002185"
     CDS             3652..4218
                     /locus_tag="PTC28_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3267 domain-containing protein"
                     /protein_id="HDK5717424.1"
                     /translation="MLNCLRSIDVHSRFGLPRIAFISFVTVVITFFVSFEMFHYYSDV
                     PFTDQNFLLFIVLMLFLYPVHKLIHILTVLPYLKYLKAHKLIRQSWLPLYNIYLDRPI
                     RKSYFCICLIMPLIVITIICILVARANPEYGHYFMFLLALNAGYSVMDILYLKVILSV
                     RQGHYVEEHQNGFLLLVHNEHSKHINMS"
     gene            4332..4715
                     /locus_tag="PTC28_002186"
                     /pseudo
     CDS             4332..4715
                     /locus_tag="PTC28_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168018.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            4899..>5308
                     /locus_tag="PTC28_002187"
     CDS             4899..>5308
                     /locus_tag="PTC28_002187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDK5717425.1"
                     /translation="MKKGIQRLFIPITASAVLLGACGNDAPTSKDQTLISSKAGDVKV
                     EDVLKEIGNEQIASQSFKVLLNKILEKKYGDKVDQKQIDKETDEEIEKYGGKKQFESL
                     LKQQGMTIDDYKEQRKLVSYQKELLNEKVKVSDK"
BASE COUNT         1810 a          928 c          902 g         1668 t
ORIGIN      
        1 aggctggaag tcgccccagc ctgtttctta atctttcaat aaactttctt gatatttcaa
       61 tttcttgatt gtactgcgga tagtgaaata accgacgata aaaaagaaga tgatgaaata
      121 aaactgtgcc acatggagta acacataaac gatactgaat aagattccta tgatcagtac
      181 ggtttgttgt aaaaactttc gatagccttc tatcacatac aattctgaca ctggccaaac
      241 ttgcggccat aaactatacg cctcttgagt ataaaattgg gacatttgta acacgataat
      301 atacatcgcc aaacttccaa tgaccgcatt cacccatgga tgatttaacc aaatcatgat
      361 gaatgcacaa atcaccacta aacgcaatgt catgtttaat gcgtctttac cacgtaaaaa
      421 gttacgctta aataaaaatg gatagagttg tgtcgagtca aatggttttg gtgtttttaa
      481 caagaaatca agataacgac gacggactgc ttgttcttgc attcctttaa catcagtaaa
      541 catgttcaca aatttgtaat agttaatgcg atgttgatgc gcgtgtttaa tcatggactc
      601 ccatggaaac agctgattca cattcaatct gttcagcaat acacataaag cgatgatacc
      661 cacgacagca atgatagctg ataagtgaga agtttccaac atgacatagt agccaccaag
      721 attgaaaatg aaaagcacga gttgaataga ccaattttca agtctgtagc ggtaccattc
      781 ccactttaag cataaaccta ctaacggtaa aatgatggct aacacactcg tcacaatgaa
      841 tgcggccata cgttcaggat aaactgtgtg tatgagtgga taaaacacga tcagcattaa
      901 aatttgtagt ggcaatcttg ataaatagct aaatataata ctatcacgca tatacgcttt
      961 catttgacgt tcgaatggta gtaaaaataa acggtcagca tcttccaaca aagtttttaa
     1021 tgggaagatg gatgtaatag acaacaccat ggatacccac agcgcgtaat tgatgtcttc
     1081 aggtacattt tttaaccatt gactataacc caatataaat gcacctaata atatgacgag
     1141 aaacactgaa aaatggccgt tgaaaataaa tttgttgtag taattttttt cctttcgctc
     1201 agcatttaaa cgctctcgaa aaagttgtct tgccgttttc atgaggattg cgctccttta
     1261 gtcacatgaa tgtaaatttc atccaacgtc gcatgtggca ttgctgtttg gtgacgtaac
     1321 gcttccaaat tccccatcgc gacgatttca ccttgatcta atataataaa acgatcacaa
     1381 tagcgctcag cagtcgctaa aatatgtgta ctcatcaaca ctgtgcggcc ttcttctttt
     1441 ttagatgcca tcagatcaag catcgactgt atgccaatcg gatcaagacc taaaaatggc
     1501 tcgtctataa tgtaaaaatc cggttctaca ataaacgcgc aaataatcat tactttttgc
     1561 ttcatccctt ttgaaaagtg actcggaaaa atatgtaatt ggtcttctaa acgaaatgtc
     1621 ttcaataaag gtaatgcgcg tgccatcgct gtatcatagt caatactata cgccatcgct
     1681 gtcatttcaa tgtgttcttt taacgtcagt gcatcataaa tgacaggtgc ttctggaata
     1741 taggataaat gttgtcgata ggcatgtata tcctctttaa tattaatgcc tgaaatcgac
     1801 atgtcacctt cagtcggcgt caacaatcct aaaatatgtt taattgttgt acttttaccc
     1861 gcaccattta agccgattaa accaacaatt tctccatctg tgagttcaaa atttatattt
     1921 ttaatgatag gctttttacc atagccgcct gttaaatttt taatttgtac agtcattgat
     1981 ctgcacctcc ataattgtta ttgtatcaaa aatacggttg ctattgctat ttaatagaca
     2041 tttgataata tcgttacatg aacagtcaca cgtgctataa taaaactaaa tgaagaaatg
     2101 agggaatcta tatgactgaa acgatattct caaagattat tgacggcgac attccaagtt
     2161 ttaaagttta cgaaaatgat tatgtctatg catttttaga tatttctcaa gtttctaaag
     2221 gccatacatt actcattcct aaaacgccgt caccaaacat ttatgaaaca gatgctgaaa
     2281 cgatgaaaca tatcggagaa gcattgccga ttgtggcgaa tgcaattaag aagacattta
     2341 acccagacgg cttgaacatc attcaaaaca atggtgaata tgcatcacaa tctgttttcc
     2401 atattcattt tcatttaatt ccgcgttata aaaatgacat tgatggtttc ggttatcatt
     2461 gggaaacaaa tgaatctcga attgatgatg ctcaaaaggc agagattgct gctcaaattg
     2521 cttcaaacat cgaataagat taaattatac tgaaaccgca tattttataa acaaatgggt
     2581 atatataaaa gaaaattgtc cgaggaggaa aattatgaaa atcgttcgaa tgacattagg
     2641 cgttgttgct ggtgtggcaa caggtttagg tgtggcttta gttgcgagag atggtcaaac
     2701 acgtatcgcc aatccaaaag cggcacgacc taagacagaa cttgaacttg aagtcgatac
     2761 gatgaaaaat agtatccatg atattaaacg ttatatcgct caaattaaaa atgaaagcca
     2821 aagttttgct ggctcaattg gtgatgaagt gaaaacaatg attggtgagt ttaaagctga
     2881 catcaatcca aatattaaac aacttcaatc acatattgaa aatatacaaa atcgtggcga
     2941 agaaatgaca aattttccaa ccaaaaaata attttttagt gtttgaagga ccattattcg
     3001 atataatgac gttaaagcat ggtacaatac ggtatcatgc ttttttatag tctaagaaag
     3061 gagtctagca ttatgaatga cagacaagca caaattgagg gaatgcttta cacacataaa
     3121 attgccatgt tatctaaagt tctatggaaa aatgccgaaa gtgattggca gcgttggtta
     3181 aaaaaatcgg gtatcgccat gaatgaacat ctgattttat taacacttta cgcttttggt
     3241 cgcgcaacta tttcagatat ttctaaatac ggtgtgatgc acgtttcaac tgcatacaat
     3301 tttgccaaac gcctagaaca acaagcattg cttaacatgg aaaaagatca caatgataag
     3361 aggaacacgt acattacttt aacggataaa ggtaaagctt tagtagatga aattttcgaa
     3421 caatatgatg aaacacaaaa taaaatctac aatgcttcaa aagatttcca aactgaaatg
     3481 ttccaccttc cgagctttag tgatgtccat tatctcgttg ctaaattgca cggtaaagac
     3541 tttattaatg acgtgaattt atgtcaaagt catattcgag aaaatttgct tgacgaacag
     3601 taatttgagg tagataatac gttatattac tgatagcaaa ggagcttgta aatgttaaac
     3661 tgtttgcgtt caattgatgt acattcaaga tttggtttac ctcgtattgc ttttataagt
     3721 tttgtaacgg ttgttatcac attttttgtt agttttgaaa tgtttcatta ttattctgat
     3781 gtaccattca cagatcaaaa ctttctattg tttattgtct taatgttatt tttatatccc
     3841 gttcacaaac ttattcatat tctgacggta ctaccttact tgaaatattt aaaagctcac
     3901 aagttaatac gtcaatcttg gctaccacta tacaatattt atcttgaccg tcccatacgc
     3961 aagtcttatt tttgtatatg tctcatcatg ccactgattg tgattaccat catttgtatc
     4021 cttgtagcac gcgcaaaccc tgagtatggt cattacttta tgtttttatt agctttgaat
     4081 gctggttatt ctgtaatgga catactctac ttaaaagtaa tcctttcagt tcgtcaaggg
     4141 cattacgtcg aagaacatca aaacggtttc ctattgttag tacacaatga acattcaaag
     4201 catattaata tgagctgata cattttcact tttgaaatgt atcagtcttt ttttatgttg
     4261 cgtcaatgaa tatgtgcccc cctaatttgc tgtatactgt catatcaaaa tttggctaaa
     4321 aagattaaaa aatgacgcat aaaccgatat tgatcatcat gttacctctt acatttcttt
     4381 ttacttcatc tacagtattt tttacaattt agcgattctc tgcattgcct taataggtta
     4441 tggtattgtt agaaagatga atactaaccc ggggttaata gcagtcgtaa gtagataatg
     4501 cacttaagaa tgcattaggg acatcattta gtgcttacaa ctttatcggt ttgactactt
     4561 ccattctcgc atcttatatc acgggatatt taacagatgt gactggttcc aaggcaatca
     4621 gtttctatct tgcagcattt ttactacttg caagcttttc agtatcatta ttattgtcag
     4681 aacaacgcaa atcaacacat gcacaatcct cataatttga gaaaaggtgt ggatcctaca
     4741 ctatcattag catgtaataa cataattatt cattaaaaat gttataaatg tggacacatg
     4801 ctcagctttt agtcgtattt atacccttct tcgttggtta ctgcaagaca ttatggtaat
     4861 atttatgtgt gttaattaca tataaaggag ctcaaaagat gaagaaaggc atacaaagat
     4921 tatttattcc tataacagca agtgcagtat tactcggagc atgtggaaat gatgccccaa
     4981 cttcaaaaga tcaaacttta atttcttcta aagcaggaga cgtaaaagtt gaagacgttt
     5041 taaaagaaat tggcaatgaa caaatcgcta gccaatcatt taaagtatta ttgaataaaa
     5101 ttttagagaa aaaatatggc gataaggtcg atcaaaaaca aatcgataaa gaaactgacg
     5161 aagaaattga aaaatatggt ggtaaaaaac aatttgaaag tttattgaaa caacaaggca
     5221 tgaccattga cgactataaa gaacaacgta aattggtcag ttaccaaaaa gagttattaa
     5281 atgaaaaagt taaagtttca gataaaga
//
LOCUS       DANHPA010000132         5231 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.132, whole genome shotgun sequence.
ACCESSION   DANHPA010000132 DANHPA010000000
VERSION     DANHPA010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5231)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5231)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5231
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.132"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(174..1238)
                     /locus_tag="PTC28_002188"
     CDS             complement(174..1238)
                     /locus_tag="PTC28_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017804887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-loop NTPase"
                     /protein_id="HDK5717426.1"
                     /translation="MLTVEQVKQLIGEINDPIINVPLKETEGVVEVTIKEEKAHVSVK
                     VAMAQLGGQPQLELQMAIVEKLKENGAKTVGIRFETLPEEKVKQYAGAKQQEEQTIEG
                     ALAKGNHLEFIAIASGKGGVGKSTVAVNLAVSLAREGKRVGLIDADIYGFSVPDMMGI
                     DEKPGIEGKTVIPVERHGVKVISMAFFVEENAPVIWRGPMLGKMLTNFFTEVKWGDLD
                     YLLLDLPPGTGDVALDVHTMLPSSKEIIVTTPHPTAAFVAARAGAMAKHTDHSILGVI
                     ENMSYFESKETGNKEYIFGKGGGQKLADELQSDLLGQLPLEQPSWKPVDFSPSIYQPE
                     DRLGQIYKEIAQKIIAKTNQ"
     gene            complement(1557..3005)
                     /locus_tag="PTC28_002189"
     CDS             complement(1557..3005)
                     /locus_tag="PTC28_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter"
                     /protein_id="HDK5717427.1"
                     /translation="MHRGVHVDKTQRNIIVAVILISAFIAILNQTLLNTALPSIMRGL
                     DIHESTSQWLVTGFMLVNGIMIPLTAYLMDRVPTRTLYLTAMGTFVVGSITAALAPSF
                     SILMTARVIQALGAGVIMPLSQFTLFTLFPKNQRGFAMGLSGLVIQFAPAIGPTLSGV
                     LVDNYSWRSPLFVVVVVSIIGLIFGWRYMRNFSDTKEVVLDKASVVLSTLGFGIMLYG
                     FSIAGARGFDDLIVLISLIVGIAIVALFIIRQIRIDNPILRLSAFRTRTFTLTSISSM
                     IVFTSMVGPALLIPIYIQNSLGLSALLSGLVVLPGAVINGVMSVVNGRLYDKVGARVL
                     VIPGFALLLITTLMMAQLTAHTSYTYVIIIFTIRLFSVSLLMMPLNTAGINSLPNDMV
                     SHGTAIMNTLRTISGSMGTALMVTLMSLGAGLYQPDASVSKTMIQREAMAHGVDLAFY
                     VTSGFLLIGFILSFFIHDRGKKERGNQRHVVR"
     gene            complement(3111..3572)
                     /locus_tag="PTC28_002190"
     CDS             complement(3111..3572)
                     /locus_tag="PTC28_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SepA family multidrug efflux transporter"
                     /protein_id="HDK5717428.1"
                     /translation="MKGKFNLFNFVTLLIILSIFVISGAIFLTLLGFGLFGLSRLLIY
                     FRLGMFTYNEGFYDNLIYYGSYIILGYFVIFGVEYLMDWLQKKLYPNPYLEGFTFHLI
                     SYAMMITMFYFVIHIHYQYIQIDYWVLMLIIAFLYICKEVFYPDAENLNRK"
     gene            complement(3598..4941)
                     /locus_tag="PTC28_002191"
     CDS             complement(3598..4941)
                     /locus_tag="PTC28_002191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016426404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5717429.1"
                     /translation="MNLKRVSIICSLVLTMFMAAIETSIVSLALPTMRADLHATQPIS
                     LVFTVYFVGIVLSIPILSELMSRIKIIYVTMLGLILFLVGSFLSGMSSHFEMLVFARL
                     LQGVGAGVNMSLVQIVPKLAFEIPFRYKVMGIVGSVWGISSILGPFLGGFILEVSSWH
                     WLFYINIPIAVVVMVLVLTSYHFESESTSKHKVYFVGMGLFYVLLALLMASVLITGHI
                     WINVVCLVLFVIFFGVTIKRSKKVSLSFIPTKEFGFKVRLAFFTDFFIAVTLIGFNVF
                     IPSYLQDHLGLTPLQSGLIIFPLSIGWLLINFTLEKIEANRTVRGLYLLAIGILIVGS
                     ISVLIGAFHPIVVAVTLFFLGMSFGTAYTKDSVMVQEETSPESMKKMMSLFTLTRNMG
                     NSIGSAIIGYIYAMDVVIFKTSIQNVMVFCIIVLVGLWVVWFTRKDKSLSTVSDK"
BASE COUNT         1752 a         1127 c          817 g         1535 t
ORIGIN      
        1 gaatatattg tatacaggtc gacctgaaaa tgcaagtctt tttttaaact ttttacagga
       61 atttaattca agcttggaca ccctattcat ctatccactt tttaactcat gtccccccta
      121 aaatgatacc gagtaaaaag gcataacatc tccttcctac tcggcaataa tctttattga
      181 tttgttttag caatgatttt ctgagcgatc tctttataaa tctgtcctaa acgatcttct
      241 ggttggtata ttgaaggtga aaagtcgaca ggtttccatg acggttgctc taatggcaat
      301 tgaccaagta agtcactttg taattcatca gcaagctttt gaccaccgcc tttaccgaaa
      361 atgtattctt tattccctgt ttctttactt tcaaaataag acatgttctc gatgacacct
      421 aaaatggaat gatccgtatg tttcgccatt gcacctgcac gcgctgctac aaatgccgct
      481 gttggatgtg gtgttgtcac gataatttct ttacttgatg gcaacatcgt atgtacatca
      541 agtgccacat ctcctgtgcc tggcggtaaa tctaatagta agtaatctaa gtctccccat
      601 ttcacttcag taaaaaagtt cgtcaacatt ttacctaaca tcggaccacg ccaaatcaca
      661 ggcgcattct cttcaacaaa gaatgccatt gaaatcactt taacaccgtg acgttcaaca
      721 gggatgactg ttttaccttc gatacctggc ttttcatcaa tccccatcat gtccggtaca
      781 ctgaacccgt aaatatccgc atcaattaaa ccgacacgtt tcccttctcg tgctaatgag
      841 actgctaaat tgactgcgac tgttgatttc ccaacgccac ctttacctga agcaatggca
      901 ataaattcta aatgattccc tttcgctagc gcaccttcaa ttgtttgttc ttcttgttgt
      961 ttcgcccctg catattgttt taccttttct tcaggaaggg tttcaaaacg aatgcctact
     1021 gttttcgcac cattttcttt tagtttttcc acaatcgcca tttgtaattc tagttgtggc
     1081 tgtcctccca attgagccat tgcaactttg acgctaacat gtgctttttc ttctttgatg
     1141 gtcacctcta caaccccttc agtttcttta agaggtacat taattattgg atcgttaatt
     1201 tctccaataa gttgtttcac ctgttcgact gttaacactt ccgacatctc cttttgtata
     1261 cgctttattc ctcattttaa caaactttta cactgttgca taaggtaaaa actccaccta
     1321 tccataaaaa ttgcgtctct cactcatcag ttcaagcttt ttacaaatac aagtgtttag
     1381 tcatactcat tgtctttatt ttagttcgct tcctcatcat aatttttgct tcattttgaa
     1441 tatgaaatct aatatgttca atgtttatta attcactcag cctccatgta tgcataaaaa
     1501 aacatcaaac aacgtcatgc tgtttgatgt ttcatctttc atcttttatc atcacattat
     1561 cgtacgacgt ggcgttgatt accacgttct tttttccctc tatcgtgaat aaagaaactg
     1621 agaataaacc cgattaataa gaagcctgaa gtaacgtaaa atgctagatc gacaccgtgt
     1681 gccattgctt cacgttgaat cattgttttt gatacagacg catctggttg ataaagtcct
     1741 gctcctaagc tcattaatgt aaccatcagc gccgtgccca tagatcctga aattgttcgt
     1801 aacgtattca tgattgctgt accatgtgac accatatcat ttggtaatga gttaattcca
     1861 gctgtgttga gcggcatcat caataacgac actgagaata aacgaatcgt aaagatgata
     1921 atcacatacg tataagatgt atgtgctgtc aattgagcca tcatcaatgt cgtaatcaag
     1981 agtaatgcaa atcctggaat gacaagtact ctcgcaccta ctttatcata taaacgaccg
     2041 ttcacgaccg acatgacacc gttaatgacc gcaccaggta atacaacaag tcctgatagt
     2101 aacgctgata gaccgagtga attttgaata taaattggaa ttaacaacgc tggaccaacc
     2161 attgacgtaa agacaatcat agatgaaatg gacgttaatg tgaatgttct tgtacgaaaa
     2221 gcagataatc tgagtatggg gttgtcaata cgtatttgac ggataataaa taaagccaca
     2281 atagcaatac caacaatcaa actgatcaat acgattaaat catcgaaccc acgcgcacct
     2341 gcaatactaa agccgtacaa cataatacca aaaccgagtg ttgagaggac aacagatgct
     2401 ttatctagaa caacttcttt tgtatcacta aagttacgca tataacgcca accgaaaatc
     2461 aagccgataa ttgaaacaac taccacaacg aataacggtg aacgccatga ataattgtca
     2521 acgagtaccc ccgacaatgt aggtccaatg gctggagcga actgaatgac aagccctgat
     2581 aatcccattg caaatccccg ttgatttttg ggaaataacg taaatagcgt aaactgactg
     2641 agcggcataa tcacacctgc ccccaacgct tgaatgacac gtgcagtcat caatattgag
     2701 aatgacggcg ctaacgcagc agtgatagaa ccgacaacaa aagtccccat cgctgttaaa
     2761 tacaacgttc ttgtaggtac tctatccatt aaatatgccg ttaatggaat cataatacca
     2821 ttcactagca taaagcctgt aactaaccat tgagaagtgc tttcatgaat gtccagacct
     2881 ctcataatac taggaagtgc agtattcaat aatgtttggt ttaaaattgc aataaaggca
     2941 ctgatcaaaa taacagcaac gatgatattt ctttgtgttt tatctacatg aacacctctg
     3001 tgcatacact ttcctcctct tacatttcta taccaatggt ttattttacg accaaaaagt
     3061 tagcttggca aagtttttga tttctcttta aaagcgcgac atgacaactc ttattttcga
     3121 tttaaattct cagcatctgg ataaaatact tctttacaaa tgtagagaaa cgcaatgatt
     3181 aacatcaaca cccaatagtc gatttgaata tattgataat gaatatgaat cacaaaataa
     3241 aacattgtaa tcatcatcgc atacgaaatc aaatgaaatg tgaaaccctc gaggtaaggg
     3301 ttcggatata atttcttttg gagccagtcc atcaaatact cgacaccaaa aatcacaaag
     3361 taaccgagga taatatagct gccgtaataa attaaattgt cataaaatcc ttcattataa
     3421 gtaaacatgc caaggcgaaa gtagatcagt aagcgactta agccgaataa gccaaaaccg
     3481 agtaacgtta aaaagatagc accagaaatg acaaaaatgg agaggatgat taacaaagtg
     3541 acaaagttaa acaaattaaa cttacctttc accaatcaaa cctccccata tctttaatta
     3601 tttatcagaa actgtactta aacttttatc tttacgtgta aaccaaacta cccacaaacc
     3661 tactaatact atgatacaaa ataccataac attttggatg ctcgttttaa agataaccac
     3721 atccatcgca taaatgtatc caataattgc tgatccaatc gaattcccca tattacgagt
     3781 cagtgtaaag agtgacatca tctttttcat actttctgga gatgtttctt cttgtaccat
     3841 cacactatct ttcgtataag ccgtcccaaa gctcataccc aaaaagaaca atgtcacagc
     3901 aacaacgata ggatgaaatg caccaatcaa tacactgata cttcctacaa ttaaaatacc
     3961 tattgcgagc aaatataaac ctcgaacagt acggttcgct tcaatttttt ctaaagtgaa
     4021 gttaatcaac aaccagccga ttgacagagg gaaaatgata agtccacttt gcaacggggt
     4081 taaacctaaa tgatcttgta aataagatgg aataaagaca ttaaagccaa ttaacgttac
     4141 tgcaatgaaa aaatcagtaa aaaatgctaa acgtacttta aagccaaatt ctttcgttgg
     4201 aataaaggac aatgacactt tttttgaacg cttgattgtg acgccaaaaa agatgacaaa
     4261 taaaactaag caaacgacat taatccaaat atgacctgtg atgagcacac tcgccatgag
     4321 taatgctagt aacacataaa ataagcccat gccgacaaaa taaactttat gtttagacgt
     4381 tgattcactt tcaaaatgat atgaagttaa cacaagcacc atcacgacga cagcaatagg
     4441 aatattaatg taaaatagcc aatgccatga agaaacttct aaaataaagc caccgagaaa
     4501 tggtccgaga atactcgaga tgccccagac actgccgaca atccccatca ctttataacg
     4561 aaatggaatc tcaaatgcga gtttcgggac gatttgtact aatgacatgt ttaccccagc
     4621 gccgacacct tgaagtaagc gggcaaacac gagcatttca aaatgggaac tcatccctga
     4681 taaaaaacta ccgactaaaa ataaaattag tcctaacatc gtcacataga tgattttaat
     4741 ccgtgacatt aattcactta aaataggaat agataacaca attcctacaa aatacactgt
     4801 aaacacgagt gaaatgggct gtgttgcatg tagatcagca cgcatcgtcg gtaacgctaa
     4861 cgacacaatc gacgtttcga tagctgccat aaacatggtt aagactagtg agcaaataat
     4921 actaactcgc tttaaattca tacttttcta cctttccata aaatatttat tattgcagac
     4981 ataaggtttg tgaagtaaac ctatcttaac atcgcaattt aatcaccttt gccctattaa
     5041 aaagttcaac tcagctgaaa atgaaaaaat gctttcaaac gctctcatct ttcaataaag
     5101 agaccgttca catcaatctg aagcgtaaga ctcacacatt cgtccatcac agcacattgg
     5161 acgaatattt aacaccttgc ttttatgtaa agtttaaaac cgttcatttt cattatctct
     5221 acttattgtg a
//
LOCUS       DANHPA010000133         5191 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.133, whole genome shotgun sequence.
ACCESSION   DANHPA010000133 DANHPA010000000
VERSION     DANHPA010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5191)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5191)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5191
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.133"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..227)
                     /locus_tag="PTC28_002192"
     CDS             complement(<1..227)
                     /locus_tag="PTC28_002192"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717430.1"
                     /translation="MKQFIDPDKFASAFVSNPNVSKVENADSSVEHYFDLYIKAFERA
                     VEYNQTIVDEQKKKKSGQKSNGLKIRNDLRI"
     gene            305..1024
                     /locus_tag="PTC28_002193"
     CDS             305..1024
                     /locus_tag="PTC28_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001157023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ORF6C domain-containing protein"
                     /protein_id="HDK5717431.1"
                     /translation="MQNLQTFNFDELPVRTLTVDDEPYFVGKDVSDILGYSNSRKALS
                     DHVDEEDKLTSQIVTAGQRRNQTLINESGLYSLIFSSKLDSAKRFKRWVTSEVLPAIR
                     KTGTYQVPSDPMQALELMFEATKQTKEEIESVKAEVIDLKDNQKLDAGEYGLVTKTIH
                     QRVAYIRQIHGLPNNKEVNKPLYQNINNDVNTMAGIKTRTQLRQKHFNDVMDIITNWF
                     PSQSTMYVIRQLEMDFEEGGK"
     gene            1021..1245
                     /locus_tag="PTC28_002194"
     CDS             1021..1245
                     /locus_tag="PTC28_002194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717432.1"
                     /translation="MKKQFLTIKELQVLTGVSKSKATSIARALNEKMEEEGFVAIRGK
                     IPIQLAREKFPYNDLSDEAVKELEEQACNI"
     gene            1233..1409
                     /locus_tag="PTC28_002195"
     CDS             1233..1409
                     /locus_tag="PTC28_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717433.1"
                     /translation="MQYLIAWFNTVAVAIVLTTILAFAGMYFTTILFVVILAEAVTYN
                     LTKYVYDTLKKTEC"
     gene            1491..1751
                     /locus_tag="PTC28_002196"
     CDS             1491..1751
                     /locus_tag="PTC28_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1108 family protein"
                     /protein_id="HDK5717434.1"
                     /translation="MYFPNGEEFSGIIEVEGFKFRKHVTREDDYILIEVTDMTYRVIA
                     ETKVYDVSDVDIAQEVINAAIYDFIEYQTDELDKVMAHFIKN"
     gene            1763..2017
                     /locus_tag="PTC28_002197"
     CDS             1763..2017
                     /locus_tag="PTC28_002197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717435.1"
                     /translation="MEKEKMLSIANKLNLYLALSEVHAFVQFWQSSAGSFSVHFTHFD
                     ERYPYDNKTLIIYDWQSDEEIESLVNKAKNVIAGGALLDE"
     gene            2010..2495
                     /locus_tag="PTC28_002198"
     CDS             2010..2495
                     /locus_tag="PTC28_002198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002486399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siphovirus Gp157 family protein"
                     /protein_id="HDK5717436.1"
                     /translation="MSSLFNLTDAYQQVYDLIAEQGEESALIDTLQSINDALEDKADG
                     YVAVIKTLEADNVAIDEEIKRLRQRKTSNQNGISRLKESLQFAMESTGKEKFKTALNS
                     YSIANNPPSLDVTEESLIPKEYWVSQAPKLNKKDLLKDIKNGADIKGVEVKQTRSLRV
                     R"
     gene            2492..3121
                     /locus_tag="PTC28_002199"
     CDS             2492..3121
                     /locus_tag="PTC28_002199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002503448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ERF family protein"
                     /protein_id="HDK5717437.1"
                     /translation="MMAELNLYQKIADVKANVDGFTKDAKGYNYDYVEGSQILHKIRP
                     KMEEYGLIMYPSVERYEHFETKNSKGKTEHAVMLAIKYHIIDSATKEELAIDFAAFGQ
                     QQDIAQAYGTALTYAERYFILKLLNIPTDEDDPDAQQKKQRYTKADKHDIEVLKNEIE
                     EFAKAVGDTEQNVRIGLNILSYEKLSSADAMRALQQVIELKRQYGGNNQ"
     gene            3118..3711
                     /gene="ssb"
                     /locus_tag="PTC28_002200"
     CDS             3118..3711
                     /gene="ssb"
                     /locus_tag="PTC28_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002447969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDK5717438.1"
                     /translation="MINNVTLVGRLTRDPNIRTTQSGVTVGQFSLAVDRHFTNQNGEK
                     EADFPNVVVFRKQAELVGKYLSKGRLCGVVGRLQTRKYDKDGQTVFVTEVVADSVQFL
                     DSGNNHQQNNTYQQNSGYQAPQNNGYQPPQQTQQTGYQPPPNSYQPQQNNNYQQAQPP
                     QNNAYQPPQQTQQVPNGQNPFANANGPIDISDEDLPF"
     gene            3725..4399
                     /locus_tag="PTC28_002201"
     CDS             3725..4399
                     /locus_tag="PTC28_002201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014533251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717439.1"
                     /translation="MSRIVNHQQNYDGTFTVVIDDVELGNKETLLLDNGLDVEVEVKP
                     IDPYMITDKQRRKIFALCNDIEEYIGQPREYMRYMFMDYVSFVEGYDRLSLSNCSRTQ
                     AKQVIEVILDWVFHNDVPLNYKTSDLLKNDKAFLYWSTINLNCVICGKSHAELAHYQA
                     VGRGRNRRKIEHTGNKVLALCTRHHKEQHNIGIDSFNDRYHLHDSWVDVDERLNKILK
                     GGKADE"
     gene            4392..4550
                     /locus_tag="PTC28_002202"
     CDS             4392..4550
                     /locus_tag="PTC28_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002475582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717440.1"
                     /translation="MNKLQVIKIALLIVILAEEIRNARKSKIFKVRLNVDTAEVKNYI
                     ENYKKSLE"
     gene            complement(4539..4862)
                     /locus_tag="PTC28_002203"
     CDS             complement(4539..4862)
                     /locus_tag="PTC28_002203"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717441.1"
                     /translation="MGKLNGLDELFNRLDEMSENAEKLSGTHEYSFDEFLNSEFMEAN
                     TDQSNFYEFVNASNLEIHNQSDFDKIAKTSEWNEYVQNHSTFDNWQDMFDTAMTKMIS
                     KKLFE"
     gene            4937..>5191
                     /locus_tag="PTC28_002204"
     CDS             4937..>5191
                     /locus_tag="PTC28_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001630361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDK5717442.1"
                     /translation="MTDQPSYYSIITANVRYDNRLTDSEKLLFAEITSLSNKYGYCTA
                     SNGYFAELYDVVKETVSRRISNLSKYGYLNIEIIKEGNEVK"
BASE COUNT         1941 a          913 c          982 g         1355 t
ORIGIN      
        1 taaattctta aatcatttct gattttaaga ccgttagatt tttgtccaga ttttttcttc
       61 ttttgttcat cgacaatagt ttgattgtat tcaactgctc gctcaaaagc ttttatatac
      121 aaatcaaaat agtgttcaac agaagaatct gcgttttcta cttttgaaac atttgggtta
      181 gaaacaaaag cggatgcaaa cttatctgga tcaataaact gtttcattat gtaacacccc
      241 caatccaacg cagtagcgtt agattcatta tacacaacac tttaacaaaa aggagtattt
      301 aaaaatgcag aatttacaaa cattcaattt tgacgaacta ccagtaagaa cattgacagt
      361 agatgacgaa ccatattttg taggaaaaga tgtatcggac attttaggct attcaaactc
      421 aagaaaagct ctatcagatc atgtagacga agaagataag ctaacgtcac aaattgttac
      481 ggcaggtcaa agacgaaatc aaacccttat caacgaatca ggattataca gtttaatctt
      541 ttcgtcaaaa ttagattcag ctaaaagatt taaacgttgg gtaacttcgg aagttttgcc
      601 ggcaattaga aaaacaggaa catatcaagt cccaagtgat cctatgcaag cgctggaatt
      661 aatgttcgaa gctactaaac aaaccaaaga ggaaatcgaa agtgtgaaag ccgaggttat
      721 cgatttaaaa gataaccaaa agcttgatgc aggtgaatat ggtttggtta ctaaaactat
      781 acatcaacgt gttgcttaca ttagacaaat ccacggctta cctaacaaca aagaggttaa
      841 taaaccactt taccaaaaca ttaataatga tgttaataca atggctggaa ttaaaacgag
      901 aacgcagtta agacagaaac atttcaacga tgtaatggac atcattacaa attggtttcc
      961 atcacaatca acaatgtacg taattagaca acttgaaatg gactttgagg aggggggcaa
     1021 atgaaaaagc aatttttgac cataaaagaa ttacaagttt taactggtgt atcgaaaagt
     1081 aaggctacat ctatcgctag agctttaaat gaaaaaatgg aagaagaggg gtttgttgct
     1141 attagaggta aaattccaat tcaattagca cgcgaaaaat ttccgtataa cgatttgtca
     1201 gatgaagctg ttaaagaatt ggaggaacag gcatgcaata tttgatcgca tggttcaaca
     1261 ctgtagcagt agcaatcgta ctaacgacaa tactcgcttt tgcaggcatg tacttcacta
     1321 ctattctgtt tgtcgtaata ctagcagaag cggtgacgta taacttaact aagtatgtgt
     1381 acgacacatt aaaaaagact gagtgctaat ggcagttagc aaacagtcga ggatagtaat
     1441 ttcgcataaa tatctatcct caatatacaa cgaaacagga ggattatcaa atgtattttc
     1501 caaacggaga agaattttca ggaatcatcg aagttgaagg cttcaaattc cgtaaacacg
     1561 taacaagaga agatgattat atcttgattg aagttactga catgacatac agagtcatcg
     1621 cagaaacgaa agtatacgat gtctcagatg tagacatcgc acaagaagtt attaacgcag
     1681 ctatttacga ttttatcgag taccaaacag atgagctaga caaagttatg gctcatttta
     1741 tcaaaaacta ggaggaataa acatggaaaa agaaaaaatg ttaagtattg caaataaatt
     1801 gaatctttat cttgcacttt cagaagtaca cgccttcgtt caattttggc aatcgagtgc
     1861 tggtagtttt tctgtgcatt tcactcattt cgatgaaaga tacccttacg acaataaaac
     1921 gcttattatt tatgactggc aaagtgatga agaaatcgaa agtctagtta acaaagctaa
     1981 aaatgttatt gcagggggtg cgttactaga tgagtagttt atttaacctt acagacgcgt
     2041 atcaacaagt ttatgacctc atagctgaac agggcgaaga atcagcttta atcgatacgc
     2101 tacaaagtat caatgacgca ttagaagata aagcagacgg atatgtagcg gtaattaaaa
     2161 cgctagaagc cgacaacgta gcgattgacg aagaaattaa gcgcctgcgt caacgtaaga
     2221 catcaaacca aaacggaatc agcaggctta aagaatcatt acagtttgct atggaatcga
     2281 caggtaaaga gaaattcaaa acagcattga atagttacag tatcgcaaac aatccgccga
     2341 gcttagacgt taccgaagaa tcattgatac cgaaagaata ctgggtatcg caagcaccga
     2401 aattaaacaa aaaagacttg ctcaaagaca ttaagaatgg tgctgacatc aaaggtgtcg
     2461 aagtgaagca aactagaagc ttgagggtga gatgatggca gaactaaatc tataccaaaa
     2521 aatagcagac gttaaagcca atgtggacgg ttttactaaa gacgctaaag gatacaacta
     2581 cgattatgta gaaggtagcc aaattttaca caaaatacgt ccaaagatgg aagagtacgg
     2641 attgattatg tatccatctg ttgaacgtta cgaacacttt gaaactaaaa atagtaaagg
     2701 taaaacagag catgcggtta tgttagctat caaatatcac attatcgata gcgcaacgaa
     2761 agaagagcta gcaattgact tcgctgcttt cggacaacaa caagatattg ctcaagccta
     2821 tggtacggca cttacttatg ccgaaagata ctttatttta aaactcttga atataccaac
     2881 ggacgaagat gatccagatg cgcaacagaa aaaacaaaga tatacaaagg ctgacaaaca
     2941 cgatattgaa gtattgaaaa acgaaataga agagtttgca aaagctgtag gagatactga
     3001 acaaaacgta aggatagggt taaacatttt atcttacgaa aaactaagtt ccgcagacgc
     3061 aatgcgagcg ctacaacaag tgattgaatt aaaaagacaa tatggaggta acaaccaatg
     3121 attaacaatg taactttagt tggacgattg acgagagacc ctaatatcag aacgacacaa
     3181 agcggtgtga cagtggggca attcagttta gcagttgacc gccactttac aaatcaaaat
     3241 ggtgaaaaag aagcagattt tccaaacgtt gtcgttttcc gtaaacaagc tgagctagtc
     3301 ggtaaatatt tgtctaaagg gagattgtgc ggtgttgtag gacgtttaca aactcgtaaa
     3361 tacgacaaag acggccaaac tgtttttgtt acagaggttg tagctgattc tgtgcaattt
     3421 ttagatagcg gaaataatca tcagcaaaat aacacttacc aacaaaacag cggatatcaa
     3481 gcaccacaga ataatggtta tcaaccacca cagcagacgc agcaaacagg atatcaacca
     3541 ccaccaaaca gttaccaacc acaacagaat aataactatc aacaggcaca accgccgcag
     3601 aataatgcat atcaaccgcc acaacaaaca caacaagtgc caaacgggca aaaccctttt
     3661 gctaacgcga atggacctat cgacattagt gatgaagatt tacctttcta gatgaggtga
     3721 tttgatgtca cgcattgtaa atcatcaaca aaattatgac ggcactttta cagtcgtcat
     3781 agacgatgtc gaattgggca acaaagaaac attattactg gacaacgggc ttgatgtaga
     3841 agtcgaggtc aagcccattg atccatacat gataacagat aaacaaagac ggaagatatt
     3901 cgctttgtgt aacgacatag aagagtatat aggtcaacct agagaataca tgcgctacat
     3961 gtttatggac tatgtctcgt ttgttgaggg ttacgacaga ctatcactta gtaattgcag
     4021 cagaacacaa gctaaacaag ttattgaagt catactcgac tgggtgtttc acaacgacgt
     4081 gccgctcaat tataagacaa gcgacctact caaaaatgac aaagcgttct tgtactggtc
     4141 taccatcaac ctcaattgcg taatatgcgg taaatctcac gcagaacttg cacattatca
     4201 agcagtaggt cgtggacgta acagacgaaa aatagaacac actggcaaca aagtattagc
     4261 gctatgtact cgtcatcaca aagagcagca caacataggc atagacagtt tcaacgatag
     4321 atatcacttg cacgacagtt gggtggatgt agacgaacgc ctaaacaaaa tactaaaagg
     4381 aggaaaagca gatgaataaa ttgcaagtca taaaaatagc actcctaatc gtcatcttgg
     4441 cggaggagat taggaatgct agaaaatcaa aaattttcaa agtaagactc aatgttgata
     4501 ctgcggaagt aaaaaattac atcgagaatt ataaaaaatc actcgaataa ttttttcgaa
     4561 atcattttag tcattgcagt atcgaacata tcttgccaat tatcaaacgt actatgattt
     4621 tgaacgtatt cattccattc agatgtttta gcgattttgt caaaatctga ttgattatga
     4681 atttctaaat tcgaagcatt aacaaattca taaaagttag attgatcggt attagcttcc
     4741 ataaactctg aatttaaaaa ttcatcaaat gaatattcgt gagtacctga tagcttttcg
     4801 gcattttcag acatttcatc aagtctatta aacaattcat caagaccatt taatttaccc
     4861 ataatcatca cccccaatcc aacgcagtag cgttagatat attatacaca acattttaaa
     4921 aggaaggagc atcaaaatga ctgaccaacc aagttactat tcaatcatta cagccaacgt
     4981 tagatatgat aaccgcctaa cagatagtga aaaattgtta ttcgctgaaa tcacatcgtt
     5041 aagtaataag tacggttact gcacagcaag taatggttat tttgctgagt tatacgacgt
     5101 ggtgaaagaa actgtctcac gtagaatttc gaatcttagc aagtatggtt atttaaatat
     5161 agaaattatc aaagaaggta atgaagttaa a
//
LOCUS       DANHPA010000134         5126 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.134, whole genome shotgun sequence.
ACCESSION   DANHPA010000134 DANHPA010000000
VERSION     DANHPA010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5126)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5126)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5126
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.134"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            512..772
                     /locus_tag="PTC28_002205"
     CDS             512..772
                     /locus_tag="PTC28_002205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717443.1"
                     /translation="MSGNIQENHSKQGTSTEVINYATTGYSNSRLGVHSVHPLIQSLS
                     LDALTIVGNLNKNSAEKLSKFMSVEPQIRLWNIFDLNLHLDR"
     gene            complement(1369..2859)
                     /locus_tag="PTC28_002206"
     CDS             complement(1369..2859)
                     /locus_tag="PTC28_002206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HDK5717444.1"
                     /translation="MSVNVRDYIDAQYNLFINGEFVPAESGEYLDVYNPANGEKLSQV
                     AKASEKDVDKAVEAATKAFPDWSRRSKAERANMLRQVHDKIMEKKEHFAYVETLNAGK
                     AIRESSSIDIPYTAKHYQYFGSVLDTDEGTLNNMEDHIMSIIQHEPIGVVGAVVAWNF
                     PMLLSSWKLAPALAAGNTVVIQPSSSTPLSLIELAKIFQEVLPAGVVNIVTGKGSESG
                     NAIFNHKGVDKLSFTGSTAVGYQVAEAGAKRLVPATLELGGKSANIILDDANLDLALE
                     GSQLGILFNQGEVCSAGSRLIVHENVYDEFIPRLVDAFKKVKVGDPLDMETQMGSQTG
                     QAQIDKIQSYIDYANESDGAKILVGGHRITDNGLDKGYFFEPTIIEVDDADDKLAQEE
                     IFGPVLVVIKVKDDEEAIDVANNSDYGLAGGVFSTNINRALNVAKNVRTGRVWVNTYN
                     QVPEGAPFGGYKKSGIGRETYKAAIENYQQVKNIYIDISNETKGLY"
     gene            complement(3639..4460)
                     /locus_tag="PTC28_002207"
     CDS             complement(3639..4460)
                     /locus_tag="PTC28_002207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDK5717445.1"
                     /translation="MRIGTIADLHFDRHQRLTMEDYLEAVVRLIDQEALNMLIIAGDI
                     SNHYSTTFEFIAQLTSEVTIPIYFIPGNHDLWRQPDEQLTTAEILRLYQDHPQCLMGT
                     PVEVDNYVIAGHMGWYDYSFAADRFTYDKLAKGKHYGATWQDKVYTAFGVSDPQLSQC
                     FAAEVGQDLVSYADRQVILVTHVVTHPKFTVPMPHRIFDFFNGFLGTSDFKPLYQHFN
                     IPYSVMGHVHFRKRLVDDNTTFLCPCLGYPREWRTDDLATELKHALQVIQIHEST"
     gene            complement(4759..4938)
                     /locus_tag="PTC28_002208"
     CDS             complement(4759..4938)
                     /locus_tag="PTC28_002208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717446.1"
                     /translation="MRESILRLIRSNQSCYDIYIHTGVSQGVISDLRSGYRTLDDVSL
                     KDAERLYDYAKNVAA"
BASE COUNT         1613 a         1054 c          843 g         1616 t
ORIGIN      
        1 aatcattatt taatcattgc atgattaatt tttcattcaa gggatagtta catacataat
       61 ttaagcacgc atttatgccg agaaaattta ttgaagttga gaagaaccct taactaaact
      121 tgtagacgaa tgtcggcata gcgtgagcta ttaagccgac cattcgacaa gttttgggat
      181 tgttaagggt tccgaggctc aacgtcaata aatcaattgg aataaagcca caaatatttt
      241 tgattatgaa acgggttttg gtacacattg ctttttcaag cagttagacc aagttatgta
      301 agagtgatat attataaaca aaataaaaag agagtcgttc cactccctcg ccaaagtttg
      361 tgaaaacgac tcacccaaaa aaagatacaa aaaatatcga tgttttgttt ttattttgta
      421 tatcttgatg ttatacgaat tcatataaat cttcaagata taaaattggg tgagcagggt
      481 ggaacgactt cttgaaaagg agttgttttt tatgtctgga aatattcaag aaaatcattc
      541 aaaacaaggc acatcgacag aggttataaa ttacgccaca accggatact ctaatagccg
      601 gttaggagta cattctgtgc acccacttat tcaaagttta agtttagatg ctctaacaat
      661 tgttggaaac cttaataaaa atagcgctga aaagctttcg aagtttatga gtgttgaacc
      721 tcaaattaga ctttggaata tttttgattt gaatttgcat ttggacagat agcatttaaa
      781 aatccagttc attttcaaga tttaggacgt aaaaagaagc ctgagacttc aacatctcag
      841 acccctttat caaaattaat agaaaaagac cctcattgat aatcattata aattctacaa
      901 ttgcctttat gggcttgctt tcctaggggc tgacccttca actaaccaac gctttgattt
      961 caactttagt ttggtagagg atgcgttggt agattttggg agcagtacag aaatctcatg
     1021 tgcaacaaag atttcgtcgt attgcccccg caaggctgac tagacttctc aaaagcatgc
     1081 gccttgagaa gtcagacagc tactgcgata tacaataacc actgttaaag ttaaatgacg
     1141 ttattttgct ttttacataa tccctcagga gtctcgccca tttgagcaat tgaatttcaa
     1201 agatagtgaa tcaatgagac ctaacttacg aatgataaca tgacaagtat taaaattctc
     1261 aagttcctta tgttgatatg cattgtatat ttcaatatta tatctttcat taatggtagg
     1321 aagggggtaa gaacttaaac ttcaccctct cttattattc aatacatatt aatataaacc
     1381 ttttgtttca ttgctaatat caatataaat gtttttaact tgttgatagt tttcgatagc
     1441 tgctttatac gtttcacgac cgatacctga ttttttgtaa ccgccaaatg gtgcaccttc
     1501 aggaacttga ttgtacgtat ttacccatac gcgacctgtg cgcacatttt tcgcaacatt
     1561 taatgcacga ttgatattag ttgagaagac accgcccgct aagccgtaat cagaattatt
     1621 agcaacatca atggcttctt cgtcatcttt aactttaatc actactaaca cagggccaaa
     1681 aatttcttct tgcgctaatt tatcgtccgc atcgtccact tcgataattg ttggctcaaa
     1741 gaagtaacct ttgtctaaac cgttatctgt aatacggtga ccacctacaa gaatttttgc
     1801 gccgtcagat tcgtttgcat agtcaatata actttgaatt ttatcgattt gtgcttgacc
     1861 tgtttgagaa cccatttgcg tttccatatc taacggatcg cccactttca cttttttaaa
     1921 cgcgtcaacc aagcgtggaa tgaattcatc atacacattt tcatggacga ttaatcgaga
     1981 gcctgcacta catacttcac cttgattgaa taaaatacct aattgggaac cttctaaagc
     2041 taaatctaga ttcgcatcat ctaaaataat attggcactt ttaccaccaa gttctaacgt
     2101 tgcaggcaca agacgttttg cacctgcttc agctacttga taaccgacag cagttgaacc
     2161 cgtaaatgat aatttatcga cacctttatg gttaaagatg gcattccctg actcagaacc
     2221 tttacctgtc acaatgttta ccacacctgc tggtaacact tcttggaaaa ttttcgccaa
     2281 ttcaatcaaa cttaatggcg ttgatgacga aggttgaatg acaactgtat tccctgcagc
     2341 aagggcaggt gctaatttcc atgaagacag taacatcggg aagttccaag cgaccactgc
     2401 acccacaacg ccgattggtt catgttgaat gatactcata atgtgatctt ccatattgtt
     2461 gagcgtacct tcatcagtat ctaacacact accgaaatat tgataatgtt tcgctgtata
     2521 aggtatatcg atactgcttg attcacggat cgctttcccc gcgtttaaag tttctacata
     2581 tgcaaaatgc tcttttttct ccataatttt gtcatggact tgacgtaaca tattcgcacg
     2641 ttctgctttc gaacgacgac tccaatccgg gaaagctttc gttgctgctt ctactgcttt
     2701 atctacatct ttttcacttg ctttagcgac ttgtgacaat ttttcaccgt ttgccggatt
     2761 atatacatct aaatattccc ctgattctgc tggaacaaat tcaccgttaa taaataagtt
     2821 atactgcgca tcaatataat ctctcacatt tacactcatg tatattgcct ccttatattt
     2881 cgacaccatt ttaaatattc ggataaaaca agcattgcaa cattcttatt cattgcattt
     2941 aatgatgtcg tattcaatat aactctaact gtattgtaaa gcgctctcat aaaaagataa
     3001 agtactttga cttatataga aaaaagtatc ttcagcttcg tatttacccc tttaaaaacg
     3061 caaaaaaaca agccttcaat ggagaagact tgtctactgg ggaaaaagaa gttagccttt
     3121 acggctcata cttccaaacg ttattgtcat gagactaatg gaagactcat gttagaaaat
     3181 gactgacacc ttagtttagt aaaatatggt tgattcaact aaacaacctt aaaaaaggct
     3241 ttaagaaact tcatcaatat aagctatatg ttgaagcatc taattggagt ataaacgata
     3301 atgtttcagt tgtaaatagg aaatgttacg atttatattg tatcgtgctt aagtctgaga
     3361 taatgtccct cctaacgtac gatgtgcagg gaccatttta gcgatacaat gaattcagaa
     3421 cagttcagac atcacgttga gtgaatgact gttcgacttc atcccagata gacatacttg
     3481 aaaccccaat agacaaatgc taaatcaagt atatcctaaa cctcctttta agataataaa
     3541 actaaagttg agcaaagtcg atgtgtgccc cgcgcatcgg ctttattttt gttttaagtg
     3601 cgccgtgtcg ttttatccgt gctatgaaca aaagatattt atgtactttc atgtatttga
     3661 atcacttgta aggcgtgctt taattctgta gcaagatcat ccgttctcca ttctcgagga
     3721 tacccgagac acggacaaag aaaagtcgtg ttgtcatcta ctaatcgctt cctaaaatgc
     3781 acatgcccca tcacgctata tggaatatta aaatgctgat acaacggttt aaagtcgctt
     3841 gttcctaaaa agccgttaaa gaagtcaaaa atacggtgtg gcatagggac agtaaactta
     3901 gggtgggtca cgacatgtgt cactaaaatg acttgacgat cagcataaga caccaaatct
     3961 tgccccactt ccgcggcaaa acattgtgaa agttgtggat cagacacgcc aaaagcggta
     4021 tacactttat cttgccaggt cgcaccataa tgcttccctt ttgctaactt gtcatacgta
     4081 aagcgatcag cagcaaaact ataatcatac cagcccatat gtccagcaat cacataattg
     4141 tcgacttcca caggcgtccc catcaaacat tgcgggtggt cttgatacaa tcgcaatatc
     4201 tctgctgtcg tcaattgttc atcgggttgt cgccataagt catgattccc aggtataaag
     4261 taaatcggaa tcgtcacttc tgatgtcaat tgtgcgataa actcaaatgt cgtcgaataa
     4321 tggttagaaa tatcacccgc aatgatgagc atatttaatg cttcttggtc aatgagacgc
     4381 actaccgctt caagataatc ttccatcgtt aaccgttgat gtcgatcaaa atgcaaatct
     4441 gctatcgttc ctattctcat cagtcgtcct cctatcttcc tcattatctc aaaagaaaca
     4501 attacctgtg tagtcgaatg ctttacgcca tgaattcaat atagtcatct acctggctaa
     4561 acatgcgtgt ttttttgaaa agaatcatgc cacatcagcc ttaaagagaa tcagaccgag
     4621 atgagtaaac gacatatatc tcttttaaac acacaaaagc accaaacaac caacgttgcc
     4681 tgatgcttta tcattcgaac tttacaaaaa gctcaatcat ctattaaagt ctccttaaat
     4741 cctcgcttct gcatcccttt atgccgcaac atttttggca tagtcatata aacgttctgc
     4801 atcttttaaa gacacatcat caagcgtacg ataacctgat ctcaaatcag agatcacacc
     4861 ttgactgaca cctgtgtgaa tgtaaatatc gtagcagctt tggttagaac ggattaatct
     4921 taatattgat tctctcatgt ttaacacatc ctttaatgat tacttcttcc ttactttcat
     4981 tatacccctt attcgcaaaa ttaccacgat tttgtgatgc ttttcacata atcatcacaa
     5041 ttacaaatca atacctatta cttccgaaat tcaaaattga aactattcaa aaaataacga
     5101 tataacttca atcctcttgt ccttta
//
LOCUS       DANHPA010000135         5114 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.135, whole genome shotgun sequence.
ACCESSION   DANHPA010000135 DANHPA010000000
VERSION     DANHPA010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5114)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5114)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5114
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.135"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            17..550
                     /locus_tag="PTC28_002209"
     CDS             17..550
                     /locus_tag="PTC28_002209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717447.1"
                     /translation="MNQPYRLLSIYTDLIVGKAVNKTKLAREWEVSKRTIQRDIAHIR
                     NFIYERCEWFELDNPIIYDNDQDSYFLNQNAKKLGHHQPAFLQLNKIQEQKIFVKFEV
                     NIKVWKSFRQKFVSKICSRGDDFVIVSVYVTEKEALTISFEYLGQVKLLGPEAVKTRL
                     IYEIAHLQSFYQSRTEE"
     gene            707..3772
                     /locus_tag="PTC28_002210"
     CDS             707..3772
                     /locus_tag="PTC28_002210"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012948.1,HMM:NF021909.1,HMM:NF028519.1,
                     HMM:NF037690.1,HMM:TIGR01168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK signal domain/LPXTG anchor domain surface
                     protein"
                     /protein_id="HDK5717448.1"
                     /translation="MNNKISALLTNKHSKYSIRKRTVGTASLLIGATLVFGIHAEDAK
                     AAENTEATDAPKVDNHQVINDEQLTTPATEASATEISAPEVQSSPSGETKVAPTAEET
                     TIDTHSETNEIETTPDAKEKLVEVAQVTPVKAPVEEDISRKQEDEKQPTSSEVEKAHT
                     AAVSQPRSLKRAIPVAGNTTSEVNRLDRVNQNVNDLIKSDTSLTVIDADKNGTIVPAQ
                     DYIAWKSLISVDDKVNSGDHFTIKYSDTIQMYGLNPVDIRNIGDVVDRNNGETIATAV
                     HDTTNKVITYTFTDYVDRFNSVKMNMDYSIYMDSAQIPQSKTGIEFGITVGNDTTTAT
                     ADINYPQYKVVDKNSIGSAFTETVSNKGNQDDPGYYIQTIYVNPLNESLKGTKLNVQA
                     YHPKYPNNVGQINQDVTNLKIYQVPKGYTLNQGYDINTKELNDVTETFQSKIVYGKDD
                     MVTIDLGDITTPFVVVVNSKFEYTDSENPTLVQMATLTSANNRSAQVGNALGFTNNAS
                     GGIGKEVYKVGNYVWHDSNQNGIQELGEEGVGGVTVEVFDTATNTKVGQAVTNADGSY
                     LITNIPNGTYRVEFSNIPDQYKVSPSNQGGDDQKDSNGLSSTITVNGKDNLSADLGIY
                     KPTYKIGDYVWYDGTSAETDGIQNNHAAEHPIQDVIVKLYDETGTKLLQETKTNREGY
                     YEFAGLEPNRYVVEFTNPEGYKPVKPNQGTTATDSNITESSNRVNVTIVDKDDLTIDA
                     GYFNEVEPPKEERFNLGDKVWEDLNKDGIQNENEPGIKGVKVTLTKEDGSTVETTTDE
                     NGNYKFTELPNGKYKVVFETPEGYAATKVNVGDTALDSDGQTVEVVIDNKDDMTIDSG
                     FHKPTPEVPEQPGEPETPTPEVPEQPGEPETPTPEVPEQPGEPEVPTPDMPEQPGEPE
                     VPTPDMPEQPGEPEAPTPDMPEQPSEPKTPTPVLSEQPSHPSHKAITRPVSVGTQVDQ
                     TSHPTSKRKKQALPETGQSSTNEAPLLGGLLAVLGALFVVGRRKKQKNQ"
     gene            complement(4558..5052)
                     /locus_tag="PTC28_002211"
     CDS             complement(4558..5052)
                     /locus_tag="PTC28_002211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002454321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717449.1"
                     /translation="MAFIILLIFFIIRLFSLAISIKHSKQLVQQGARAYGEKNSKWLA
                     ITHILIYVGAAIETLLNHDTWSIVNTVGLIIIVLAYLVLFHVIKTLGPIWTLKLYILP
                     DHPIIRSGLYRVTKHPNYYLNIIPELIGVLLLTHATYTAILLIPYAYFLFVRIRQEEK
                     LMSL"
BASE COUNT         1913 a          886 c         1031 g         1284 t
ORIGIN      
        1 ttattgggag gaaactatga atcaacctta tcgattactt tctatctata ccgatttgat
       61 tgtaggcaag gcagtaaata aaacaaaact tgcgagagag tgggaagtaa gtaaaagaac
      121 gatacaacga gacatcgcgc atattcgaaa cttcatatat gaacgttgtg aatggtttga
      181 attagataat ccaattattt atgacaatga tcaagatagc tactttttaa atcaaaatgc
      241 caaaaaatta ggacatcatc aacctgcttt cttgcaactc aataagatac aggaacaaaa
      301 aatttttgtc aaatttgagg tgaatatcaa ggtatggaaa tcttttagac agaaattcgt
      361 ttctaaaata tgctcaaggg gcgatgattt tgtcattgta tcggtatatg tcacagaaaa
      421 agaagctttg acaatcagct ttgaatattt gggtcaagtt aaattattag gacctgaagc
      481 cgttaaaaca agattaattt atgaaattgc gcatctccaa tcattttatc aaagtagaac
      541 agaagaataa ttgaagaaaa attagatttc tcctgattat aagcacacag gacatggtgg
      601 cgttttatat tgcatgtttc aggtagatta gtacgcatgt tagacagagt atgatgagaa
      661 cttaaagaag atttataaca attaaaaaag aggatgatca aacaaaatga ataacaagat
      721 aagtgcactt ttaacaaata agcatagtaa gtactcaatt cgaaaacgga cagtgggcac
      781 agcctcatta ttaattggtg ctacattagt attcgggata catgcagagg acgcaaaagc
      841 cgcagaaaac acagaagcaa cagacgcccc aaaagttgat aaccatcaag taattaatga
      901 tgaacaatta acaacacctg caacagaagc atcagcaact gagatatcgg cacctgaagt
      961 ccaatcatcg ccatcaggag aaacaaaagt agcacctaca gccgaagaaa cgacaataga
     1021 tacacactct gaaacaaatg aaatagaaac gacacctgat gcaaaagaaa aactagtaga
     1081 agtagctcaa gtgacgccgg ttaaagcacc tgttgaggaa gatatctcac gtaaacaaga
     1141 agatgagaag caaccaacgt catctgaagt tgagaaagct catacagcag cagtatcaca
     1201 acctagatca ttaaagcgcg ccattccagt tgcgggtaac acgacttcgg aagtgaatcg
     1261 tttagatcgt gttaaccaaa atgttaacga tttaataaag tctgatactt ctttaactgt
     1321 aattgacgcg gataaaaatg gaacgatcgt accagcgcaa gattatattg catggaaatc
     1381 attaatttct gtagatgata aagtcaactc tggtgatcat ttcacaatta agtattccga
     1441 cactatacag atgtatggat taaaccctgt agacattaga aatataggtg atgtggtaga
     1501 tcgaaacaat ggagagacga ttgctactgc cgtacatgat acaacgaaca aagtcattac
     1561 gtatactttc acagactatg tggatagatt taatagtgtg aagatgaata tggattattc
     1621 tatttatatg gattcagctc aaatcccgca aagcaagacc gggattgaat ttggtataac
     1681 agttggtaat gatacaacaa cagcaactgc ggatattaac taccctcaat ataaagtagt
     1741 agacaaaaac tcaataggtt ccgcttttac agaaacagtt tctaataagg gcaatcaaga
     1801 tgatccgggt tattatatac aaaccatcta cgttaaccca ttaaatgaaa gtttaaaagg
     1861 tacgaaatta aatgtacaag cgtatcatcc gaagtaccct aataatgtgg ggcaaattaa
     1921 tcaagacgtt acaaatttaa agatttacca agtccctaaa gggtatacat taaatcaagg
     1981 ttatgatata aacacaaaag aattaaatga tgtcacagaa acattccaat caaaaattgt
     2041 atatggtaaa gatgatatgg tgacaataga tctcggtgat ataactacac catttgtagt
     2101 tgtagttaat agtaagtttg aatatactga ttctgaaaat ccaacgctcg tacagatggc
     2161 tacgcttaca tcagcaaata atagaagcgc acaagtaggt aacgcgttag gatttactaa
     2221 taatgcaagt ggtggtattg gaaaagaagt atataaagtc ggaaattacg tgtggcatga
     2281 ctccaatcaa aatggtattc aagaactagg tgaagagggc gttggcggcg ttacagttga
     2341 agtgtttgat acagcaacga atacaaaagt gggtcaagca gtaacaaacg ctgatggttc
     2401 atatttgata actaacatac cgaatggcac gtatcgcgtg gagttctcaa acatacctga
     2461 tcaatataaa gtatcgccat caaatcaagg tggagatgat caaaaagatt caaatggatt
     2521 atcttctaca atcactgtaa acggaaagga taatttatca gcagatttag gtatttacaa
     2581 gccaacatat aaaattggag actatgtttg gtatgatggc acatctgcag aaacggatgg
     2641 tatccaaaac aatcatgcag cagaacatcc aattcaagat gtgattgtaa agttatatga
     2701 tgaaacaggt acaaaacttt tgcaagaaac taaaacaaat cgtgaaggat actatgagtt
     2761 tgcaggtcta gaacctaacc gttatgtcgt agaatttacc aacccagaag gctataaacc
     2821 agtcaaacct aatcaaggta caacagcaac tgattcaaac attaccgaat catcaaatcg
     2881 tgttaatgtt acaattgttg ataaagatga tttaacaata gatgcaggtt actttaatga
     2941 agtcgaacca ccgaaagaag aaagatttaa tctaggtgat aaagtgtggg aagacctcaa
     3001 taaagatggc attcaaaacg aaaatgaacc gggaatcaaa ggggtaaaag tgaccttgac
     3061 gaaagaggac ggttcaacag tagaaacaac gacagatgag aacggaaatt acaaatttac
     3121 agagttacca aatggcaagt ataaagtagt gttcgaaaca ccagaaggct atgcagcaac
     3181 gaaagtaaat gtaggagata ctgcactaga ttcagatggt caaacagttg aggttgttat
     3241 tgataataaa gatgacatga ctattgactc aggcttccac aaaccaacac cagaagtgcc
     3301 agagcaaccg ggagaaccag aaacaccaac accggaagtg ccagagcaac cgggagaacc
     3361 agaaacacca acaccggaag tgccagagca accgggagaa ccagaagtac caacaccaga
     3421 catgccagag caaccgggag aaccagaagt accaacacca gacatgccag agcaaccggg
     3481 tgagccagag gcaccaacac cagacatgcc agagcaaccg agtgaaccaa aaacgccaac
     3541 acccgtatta tcagaacaac caagtcaccc aagtcataaa gcgataacaa gaccagtcag
     3601 cgtgggtacg caagtggatc aaacatctca cccaacttca aaacgtaaga aacaagcctt
     3661 gcctgaaaca ggtcaatctt caacgaatga agcaccatta ctaggtggct tacttgcagt
     3721 attgggagca ttatttgttg taggacgtcg taaaaaacaa aaaaatcaat aatacgaaaa
     3781 tcatatgagt tcaagaggga ctgggacatg atgttttccc agtctctgct tctatttatg
     3841 gattgatatc tatcaatggt gattaaaccg ttgaaaataa gggtgtatgt aaaaaatgat
     3901 gcgctcgttt tcttgatttc attaacttgc aagcagttgc gcagtatttg aaatatgatt
     3961 gcccagaagg ctgagactcc tgagggataa gttaaaggct aaacaacgtc atttaacttt
     4021 aaaagtggct accgtttaac gcagtagctg tctgacttct caatgcgcat gcttttgaga
     4081 aatctagtca gccttgcggg ggcagtacga cgaaatcttt gtgacacatg agatttctgt
     4141 actgctccca aaatccaatt cggcttcaaa caaatgttga cttcaatcaa gccgaattga
     4201 gttggagggc cagcccctag gaaagggaag ccatgatggc aatcaaaaac cgaaaatcgt
     4261 agggagagca agtttaacaa aatattgcat caatcgcatc aaaagttttt atgtcccgcc
     4321 cccttttttg cactttgaaa ggaaagtaga cctagatcat atcgttggta caagtaattg
     4381 atggatcacg tcgagaaagg ggacaattga tacaggaatt ggagaaatag gaagtatata
     4441 atagtcaaaa tatggtatga ctcaagtcta tgtaagttgt tgtaattagt gaaggcaaca
     4501 gaaaagaaca gcacatgtcg aaatgaaaaa agaaagcttt caacatgtgc tcttgtttta
     4561 gagtgacatc agcttttctt cttgacgaat acgaacgaat aagaagtaag cgtatggaat
     4621 taataagata gctgtgtatg tcgcatgtgt aagtaacaga acaccaatta attcagggat
     4681 aatattcaag tagtagttcg gatgtttagt gacgcggtat aaaccagatc gaatgatagg
     4741 gtggtctggt aaaatataca acttcaaagt ccaaatcggt cctagtgttt taatgacatg
     4801 gaataaaacg aggtaagcca gtacaatgat gattagacct acagtattta ctatgctcca
     4861 tgtatcatgg ttcaataatg tttcgattgc tgcaccaaca taaattaaaa tatgtgtgat
     4921 ggccaaccat ttcgaattct tttcaccgta tgcccgtgcg ccttgttgta caagttgttt
     4981 tgaatgtttg atagaaatag caaggctaaa aagacgaatg ataaagaaaa tcaataaaat
     5041 aataaaagcc atggtgttcc tccaatgaaa taaaatcaat ttatccttac attttatagt
     5101 ttcacactta caat
//
LOCUS       DANHPA010000136         5100 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.136, whole genome shotgun sequence.
ACCESSION   DANHPA010000136 DANHPA010000000
VERSION     DANHPA010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5100)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5100)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5100
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.136"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            15..1859
                     /locus_tag="PTC28_002212"
     CDS             15..1859
                     /locus_tag="PTC28_002212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HDK5717450.1"
                     /translation="MFVWNFNQRDRKPINPRYMPGLDGVRAVAVIAIIIYHLNPQWLS
                     GGFLGVDTFFVISGYLITSLLLTEYHNTGKIKLMSFWLRRVKRLIPAVLFLVMGVIVL
                     SLIFMPTEIQKVRADSIAAIFYVSNWWYIMQNVDYFEQFAVQPLKHLWSLAIEEQFYL
                     VFPIVLLSLFSFIRRLKSIRIIFLILLVISMIAMMVLYVPNENVARVYFGTDTRIQTL
                     LMGVLLALVWPPFQLKAKVNRQMRTMIDTAGVVGLAILFICFKFVSETNSILYYGGFF
                     LISTVTLLVIASSVHPSGYFAKFLGNKVFTFIGSRSYSLYLWHYPIIVLIHHQFVQGQ
                     IPPLVYVVEILLMVLMAEFSYKFIEQPFRKEGFNIFAFNHLKNWRSQKVLRTWLVIIL
                     LIPTLLVMVGSFNRFAQKNSTRVTEVNTEEIDKLITQPLPLPQLEIDGFVVKGNKQKY
                     ASWKPLLIGDSVMVDIGDYFRSFVPKADINGKVGRQLVEATSLAKRQYQSYRDKNDIV
                     VLELGTNGDFTEEQLNSLLEQFGEADIYLVNTRVPRSYESHVNQVLAKAAKKRANVTL
                     VDWYSRSENHTEYFAPDGIHLQPPGVRALTNSIIQAIEKNHGTKKKNK"
     gene            2465..5086
                     /gene="clpB"
                     /locus_tag="PTC28_002213"
     CDS             2465..5086
                     /gene="clpB"
                     /locus_tag="PTC28_002213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002433465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HDK5717451.1"
                     /translation="MDINQMTHAIQNALQKAIEHAKTYKLTNVEVEAVLKAVLEAPES
                     LFQSILERANIDTHALNQAYEDKLKNYPTVKGDNVQYGQYMSPQMNNLFVKAENYMQE
                     YDDQYISMEHVLRAAIDVDETTKRYVDGKKEVIIEIIKKIRGGNHVTTQNPEVNYEAL
                     AKYGRDLVEEVRKGNMDPVIGRDEEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGL
                     AQRIVKRDVPDSLLDKTVFELDLSALVAGAKYRGEFEERLKAVLKEVKESEGRILLFI
                     DEIHMLVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLNEYREYIEKDSALERRFQK
                     VAVAEPTVEDTISILRGLKERYEVHHGVRIQDRALVAAAELSDRYITDRFLPDKAIDL
                     VDQASATIRTEMGSNPTELDQANRRVMQLEIEENALKKESDKASRIRLKELQEELAEE
                     KEKQAALQARVENEKEKIAKVQEKRAELDESRKALEDAENNYDLEKAAILQHGKIPEL
                     EKELKALEAAFQEEKGTDSDRIIREVVTDEEIGEIVSQWTGIPVSKLVETEREKLLHL
                     SDILHERVVGQDRAVDLVADAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAS
                     SLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYVGHDEGGQLTEAVRRNPYSVILLDE
                     VEKAHTDVFNVLLQILDEGRLTDSKGRSVDFKNTIIIMTSNIGSQILLENVKDSGKID
                     DATEKAVMNSLNAYFKPEILNRMDDIVLFKPLTVDDMQMIVDKILINLNIRLMDQRIT
                     LEISDEAAKWMGETAYEPQFGARPLKRFVQRHVETPLARMMIKENLPEGTIVRGDLKD
                     GDIHFEVEKPQRTQHEN"
BASE COUNT         1698 a          830 c         1094 g         1478 t
ORIGIN      
        1 atttggaaag aatgatgttt gtgtggaatt ttaatcaacg agacagaaaa cctatcaacc
       61 cgcgatacat gcctgggtta gacggtgtta gagcggttgc agttatcgca atcattatct
      121 atcatctcaa tccccaatgg ttgtcgggtg gctttctagg ggtagataca ttttttgtaa
      181 tttctggtta tttaattacg agtttgttat taacagagta tcataataca ggaaaaatta
      241 aattgatgtc attttggcta agacgtgtga aacgactgat tcctgcagtg ctctttttag
      301 tcatgggtgt cattgtgctg agcttaattt tcatgcctac ggaaattcaa aaagtacgtg
      361 cggatagtat tgcggcaata ttttatgtgt cgaattggtg gtacatcatg caaaatgtcg
      421 attactttga acaatttgca gtacaaccat taaaacattt atggtcatta gcaatagaag
      481 agcaatttta tctcgtgttt ccgattgtgt tactcagttt gttcagcttt atacgtcgtc
      541 tgaaatcaat acgcatcata tttttaattt tactcgtcat ctccatgatc gcgatgatgg
      601 tgttatatgt accgaacgaa aatgttgcac gtgtttattt tggtactgat acacggatac
      661 aaacattatt gatgggggta ttgcttgcac tggtttggcc accatttcaa ttaaaagcaa
      721 aagtgaaccg tcaaatgcgc acgatgatcg atactgcggg tgtcgtcggc ttggcgattt
      781 tgttcatttg tttcaagttc gtatctgaga cgaatagtat cctgtattac ggtggatttt
      841 ttctcatttc aacggtcaca ttattagtta tcgcgagcag tgtgcatcct tcagggtatt
      901 ttgcgaagtt tttaggtaac aaagttttta cttttattgg tagtcgttca tatagtttgt
      961 atttatggca ttatccgatt attgtgttaa ttcaccatca gttcgtgcaa ggccaaattc
     1021 cacctttagt ttatgtcgtt gaaattttat taatggtgct catggcggaa ttttcttata
     1081 aatttatcga acagccattt agaaaagaag gctttaacat ttttgccttt aatcatttga
     1141 aaaattggcg ttcacaaaaa gttttacgga catggttagt gattatttta ctcattccaa
     1201 cgttacttgt gatggtgggg agctttaacc gtttcgccca aaaaaatagt acgcgagtga
     1261 cagaagtaaa taccgaagaa attgataaat tgattaccca gccactgccg ttaccgcaac
     1321 ttgaaattga tggctttgtc gtgaaaggga ataagcaaaa atatgcatca tggaagccgt
     1381 tattaattgg tgattccgtg atggtagaca ttggcgatta ctttagatca tttgtaccta
     1441 aagcagacat taacggtaaa gtgggacgtc aattggtcga agctacttct cttgctaaac
     1501 gacaatatca aagctatcgt gataaaaatg acattgtcgt ccttgaatta gggacaaatg
     1561 gtgattttac agaagaacag ttgaacagtt tgctcgaaca atttggcgag gccgatattt
     1621 atcttgtcaa tacgcgcgtt ccacgttctt atgagtcaca tgtgaatcaa gtgttagcga
     1681 aagccgcgaa aaaacgagcg aatgtgacgt tagttgattg gtatagccgt tctgaaaacc
     1741 atacagaata ttttgcgccg gatggtattc atttgcagcc accaggtgta cgcgcattaa
     1801 cgaacagcat tattcaagcg attgaaaaaa atcacggtac gaagaaaaag aataagtaag
     1861 aaaataattg gggaataagt cattaagatt acccagtccc tctcctatga tttgtcaaag
     1921 gtgtgtgaat taaaattgac atcactaaac tcaatcgtcc aatgtttact tttttgaatc
     1981 aagtgttagg atgtattcga ttatatggtt tcgttagtgt gatgctttct aataatcata
     2041 tcatttatca ttgactaata aatagtgaat gatttttaat aagcaatgga tatttgctat
     2101 tacggcagtc ttgtgggctt tctcattagg ctgctctttt aatttagaat aatcactcac
     2161 catatgactt tgataatgat ctctaccata agattgcgag gccatgatgg cagtctaaaa
     2221 ctattaatca taaggaaggc aagttcaaca aaaatatttc atcaatagca tccaaaactt
     2281 tgatgccctt atttttaatg attgaaaaag ctgtatgggg ttaaatatat gggggagtat
     2341 ttaaaaatag tcaaaaaaag tcaaagctat cgattgattt ttagtgaatg tggacttata
     2401 atagaattaa ggtcaaagaa agtcaaagtc aattcgacat attccaataa aggagtgaga
     2461 cattttggac attaatcaaa tgacacatgc gattcaaaat gcacttcaaa aagcaattga
     2521 acatgcgaaa acgtacaaat taacaaatgt agaagtagag gctgtattaa aagcagttct
     2581 tgaagcacca gaaagcttat ttcaaagtat tttagaacgt gcaaacattg atacgcatgc
     2641 tttaaatcaa gcctatgagg acaagctaaa aaattatcca acagtgaaag gtgacaacgt
     2701 ccaatacggg caatatatgt cgcctcaaat gaacaattta ttcgttaaag ctgaaaatta
     2761 catgcaagaa tatgatgatc aatatatttc gatggaacat gttttacgtg cggccatcga
     2821 tgttgatgaa acgacgaaac gatatgttga cggtaaaaaa gaggtcatca ttgaaatcat
     2881 taaaaagata agaggaggga atcatgtgac tacacaaaac cctgaagtaa actacgaagc
     2941 attagcaaaa tatggtcgtg acctcgttga agaagtgcgt aaaggtaaca tggaccctgt
     3001 cattggtcgt gatgaagaaa tacgtaatac gattcgtatt ttaagtcgaa aaacgaaaaa
     3061 caaccctgta cttattggtg aacccggtgt tggtaaaacg gcgattgttg aaggattggc
     3121 acaacgtatc gtgaaaagag atgtgccgga ttcattgctt gataagaccg tgtttgaatt
     3181 agacttgagt gcgctcgttg caggtgcgaa ataccgtggt gaatttgaag aacgactcaa
     3241 agcggtatta aaagaagtga aagaatcaga aggccgtatt ttactcttca tagatgaaat
     3301 tcatatgttg gtcggtgcag gtaaaacgga cggtgcgatg gatgccggca atatgctgaa
     3361 accgatgtta gctagaggtg aacttcactg tattggtgcg acaacattaa atgagtatcg
     3421 tgaatacatc gaaaaagatt ctgcgttaga gcgtcgtttt caaaaagttg cggttgcaga
     3481 accgactgtt gaagatacga tttctatttt aagaggtttg aaagaacgtt atgaagtcca
     3541 tcatggcgtg cgtattcaag accgcgcact cgttgcggca gcggaattgt cagatcgcta
     3601 tattacagat cggttcttac cggataaagc gattgattta gtggaccaag cttcagcaac
     3661 gattcgaaca gaaatgggtt caaacccaac tgaactcgac caagcgaatc gtcgtgtgat
     3721 gcagttagaa attgaagaaa atgcattgaa aaaagagtcc gataaagcaa gccgtattcg
     3781 tttgaaagaa ttgcaagaag aattagctga agaaaaagaa aaacaagcag cattgcaagc
     3841 acgtgtggaa aatgaaaaag aaaaaattgc aaaagtgcaa gaaaaacgtg cagaacttga
     3901 tgaaagtcgt aaagcattag aagacgcaga aaacaactat gaccttgaaa aagcagcaat
     3961 tcttcaacac ggtaaaattc cagaattaga aaaagaacta aaagcgttag aagcggcatt
     4021 ccaagaagaa aaaggtacag actcagaccg cattattcgt gaagtcgtga cagacgaaga
     4081 aatcggtgaa atcgtcagtc agtggacagg tattcctgtg tcaaaattgg tcgaaactga
     4141 acgtgaaaaa ttattacact tatccgatat tttacatgag cgtgttgtag gccaagatcg
     4201 tgcggtagat ttagtagcag atgcggttgt acgggcgaga gcaggaatta aagacccgaa
     4261 ccgtcctatt ggttcattcc tatttttagg gccaacaggg gtcggtaaaa cagaattagc
     4321 caaatcatta gcgtcatcat tgtttgattc tgaaaaacat atgattcgca tagatatgag
     4381 tgaatatatg gaaaaacacg cagtctctcg tctaatagga gcgcctccag gttatgtggg
     4441 tcacgatgaa ggtggtcaat taacagaagc agtgagacgc aatccttatt cagtcatttt
     4501 gttagacgaa gtagaaaaag cacatacaga tgtctttaac gtattactgc aaattttaga
     4561 cgaaggtcgc ttaacagatt caaaagggcg tagcgttgat ttcaaaaaca caattatcat
     4621 catgacaagt aatattggtt cacaaatttt acttgaaaat gtgaaagata gtggcaagat
     4681 tgatgacgca acagaaaaag cagtcatgaa cagtttgaat gcatacttca aacctgaaat
     4741 tttaaaccgt atggacgata tcgtattatt caaaccatta actgtcgacg atatgcaaat
     4801 gattgttgac aaaatcttaa ttaatttgaa tatccgctta atggatcaac gtattacgtt
     4861 agaaatttcg gatgaagcgg caaaatggat gggtgaaaca gcttacgaac cccaatttgg
     4921 tgcacgtcca cttaaacgtt tcgtgcagcg acatgtcgaa acaccacttg cacgtatgat
     4981 gattaaagaa aacttaccag aaggcacaat cgtacgtggt gatttgaaag atggcgacat
     5041 tcattttgaa gttgaaaagc ctcagcgtac acagcatgaa aactaatgta ataaaatgaa
//
LOCUS       DANHPA010000137         5093 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.137, whole genome shotgun sequence.
ACCESSION   DANHPA010000137 DANHPA010000000
VERSION     DANHPA010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5093)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5093)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5093
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.137"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(48..1412)
                     /locus_tag="PTC28_002214"
     CDS             complement(48..1412)
                     /locus_tag="PTC28_002214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HDK5717452.1"
                     /translation="MTAETNFFWLNCGYNRWNHNEPLVGQKTVFESGAQFNPTQGFRA
                     FKQAKVGDRVIFYQVQTDAGLLGWGEITNVQTGAQNKIHVEFKFVETFKALTTDYLKR
                     SEPLEFRMNNMKETLFNKISYDEFELIKGLGSGDISIPRYFFMAETESFESDETYTIY
                     THTINGIKRNGYHHYTQLEVGDQVVIYNRYSNQSVIGRAEVAHHIHTRPPEAGRTNST
                     AIEIRYIEDIPPVSLMTLNKHPKLKNLYFLQENAKQAIASLTPTQFDAIMEMSENDGL
                     KGQFEAVTHTEEGQQVDDIKPFILLLAHDKAEGLASAKTLVEKANATPVITVGHPDFS
                     EEMLYGRYLPNEAGALYYREGFITELMPKTDRQFLVIDQFERIDADIFQTYINVIEGH
                     EVTLPRYNKNGSMVKWSREKDSFYRFNPNWHIVGVTYLTAQEVKEKYPSQFLKYARIV
                     QVKH"
     gene            complement(1489..1725)
                     /locus_tag="PTC28_002215"
     CDS             complement(1489..1725)
                     /locus_tag="PTC28_002215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717453.1"
                     /translation="MKIGLYIALICGVVAGATIFFQAPLFPSLIFPIIIGMVGIIATL
                     WTLPQSDISPMLKLGGIMINLFPVVAGIFQLMNG"
     gene            complement(1742..2680)
                     /gene="manA"
                     /locus_tag="PTC28_002216"
     CDS             complement(1742..2680)
                     /gene="manA"
                     /locus_tag="PTC28_002216"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase, class I"
                     /protein_id="HDK5717454.1"
                     /translation="MPLILEPVFQERIWGGTNLAQFGYDLPSDHTGEVWGISAHPHGA
                     NRILNGPFKGQTLDEVWENQPKLFGEFPTKKFPLLTKILDATEKLSVQVHPDDTYAYE
                     HENGEYGKTECWYILDAKQGAEIIYGTHADSHEALNEMLERREFERLFKRVPVHKGDF
                     FFVPAGTVHGIGDGIMILETQQSSDTTYRIYDYDRVDKEGKKRELHLEKCKDVIQIGD
                     ESPNVIPQTEVIENHKCTIFVQNHFFTVAKWEISGTLNYMKPREFVLVSVLEGQGQLI
                     SDGEIYDIQKGNHLILTAEDLDNVFEGDFTLMVSYV"
     gene            complement(3087..3791)
                     /locus_tag="PTC28_002217"
     CDS             complement(3087..3791)
                     /locus_tag="PTC28_002217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HDK5717455.1"
                     /translation="MKISNQKIYEQIADILIQQIEEGVLKEGDRLPSIQKLAAEYGVS
                     NASIREALNALRIIGLIDIKHGYGTFVKQKQPLLFDFTSQALTQKRVREILELREVVE
                     VATAKLAASRRTEEEILVMEEALDEMNGAIERHQSGEEADLKFHLAIAKASDNHLLYE
                     LLNNIADLIQQTMKGTRHIYIYSRQKTMEKLMEEHSVILEAIKNKDSVASANLMTAHL
                     AEIRQTLVENYIVNEH"
     gene            3977..4882
                     /locus_tag="PTC28_002218"
     CDS             3977..4882
                     /locus_tag="PTC28_002218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase"
                     /protein_id="HDK5717456.1"
                     /translation="MFTFTKLFWHNTQNQKARLFGIAFIGFAILLLLTILAMSPYNLL
                     LQVWQMSMLTGQQNLTTLILMMVGAILLTIFLFAMLIFPFFVGVISAIHHSILNTTKA
                     RWKDLFRAFKKGVWGKTVILGILTLLFIVVTAIIYALVNAGMTFLIQQIFNWVSGTGL
                     GQGVLQFIVSILIVLISFVLSIVVWFAALYIINIAVSVNEDASRTIKSHFKEAGSGFK
                     NGKRTFLRFFIGILLLNLIFIILNEPINFLIQQSLAHMSQNLAYYLMMVLNVVFLLLR
                     YVVYLLIIGTAVQYFVRRGRKETHV"
BASE COUNT         1463 a         1047 c          846 g         1737 t
ORIGIN      
        1 aaaaatgaaa aaagacattc agcttcttaa ccgaatgtct tttttcatta atgcttcact
       61 tgtacaatac gtgcatattt taaaaactga gacggatatt tctccttcac ttcttgcgct
      121 gtcaaataag tcacacctac aatatgccag ttcggattaa accgataaaa tgagtctttc
      181 tccctactcc atttcaccat tgaaccattt ttattataac gtggtaacgt cacttcatgc
      241 ccttctatga cgttaatgta cgtttgaaaa atatctgcat cgatacgttc gaattgatca
      301 atgactaaaa attggcgatc tgttttaggc atgagctctg taataaaacc ttctctataa
      361 tacagtgcac ccgcttcatt aggtaagtat ctgccgtaca acatctcttc agaaaagtca
      421 ggatgtccca ctgtaatgac tggcgtagca ttggcttttt caacaagcgt tttagctgat
      481 gctaaccctt ctgctttatc gtgcgctaat aataaaatga acggtttaat atcatcgact
      541 tgttgacctt cttctgtatg tgtcacggct tcgaattgcc cttttaaacc gtcattttcg
      601 ctcatttcca taatcgcatc gaattgtgtt ggtgtcagac ttgcaatggc ttgtttcgca
      661 ttttcttgta agaagtacag atttttaagt ttaggatgct tatttaatgt catcaaactg
      721 acaggcggaa tatcttctat gtaacgaatt tcaatcgctg tgctgtttgt tcttcccgct
      781 tctggtggtc tcgtatgaat atgatgagcg acttctgcac gaccaatgac agattggtta
      841 gaataacggt tatagatgac aacctgatca ccgacttcta attgtgtgta atgatgatag
      901 ccatttcttt taatcccatt aatcgtatgt gtatagattg tatacgtttc atctgactca
      961 aagctttcag tttccgccat aaaaaagtat cgtggaatag aaatatcacc gctacctagc
     1021 cctttaatca attcgaattc atcataagaa atcttattga acaatgtttc tttcatatta
     1081 ttcatacgaa actctagcgg ttcacttctt ttcagataat ctgtcgttaa tgctttaaat
     1141 gtttcaacaa atttgaactc aacatgtatt ttattttgcg cccctgtttg aacattggta
     1201 atctcacccc aaccgagtaa accggcatct gtttgcactt ggtagaagat gactctatca
     1261 ccgactttgg cttgtttaaa agcacgaaac ccttgtgttg gattaaactg tgctcctgat
     1321 tcaaatactg ttttttgtcc aacgagtggt tcattgtgat tccatcgatt ataaccacaa
     1381 ttcagccaaa aaaaattcgt ttctgctgtc atggtaacaa tgtatctcct ttttaattat
     1441 tttatctcat ttattataaa agtattgtca tcaaacaaca atgctttttt atccgttcat
     1501 gagttgaaaa atgccagcaa ctactggaaa taaattaatc atgataccgc cgagctttaa
     1561 cattgggcta atgtcacttt gaggtaaagt ccataacgtc gcaatgattc ctaccattcc
     1621 aatgataatc ggaaaaatca gagacggaaa tagcggcgct tgaaagaaaa tcgttgcacc
     1681 tgccacgacg ccacaaatta atgcgatata cagtccaatt ttcataacaa tctcctattc
     1741 tttagacgta actcaccatc agcgtaaaat cgccttcaaa aacgttatct aaatcttctg
     1801 ctgttaaaat taaatgattc cctttttgaa tatcataaat ttcgccatca gaaatgagtt
     1861 gcccttgccc ttcaagcaca gaaactaaca caaactctcg aggcttcata taattcaatg
     1921 ttccactaat ttcccatttc gcgactgtaa aaaagtgatt ttgtacaaaa atcgtgcatt
     1981 tgtgattttc gatgacttcc gtttgtggaa tgacattcgg gctttcatca ccaatttgaa
     2041 tgacgtcctt acatttttca agatggagtt cgcgcttctt tccctcttta tccacgcgat
     2101 cataatcata aatacgataa gtcgtatccg atgactgttg tgtctctaaa atcataatgc
     2161 catcaccaat accgtgcacc gttccagcag gtacaaagaa aaaatcacct ttatgtacag
     2221 gaacacgctt aaacaaacgc tcaaattcac ggcgctctaa catctcattt aacgcttcgt
     2281 gcgagtctgc gtgtgtgcca taaataattt cagcaccttg tttggcatca agaatatacc
     2341 aacattccgt tttgccatat tcaccatttt catgttcgta tgcatacgta tcatctggat
     2401 gcacttggac agatagcttc tctgtcgcat ctaatatttt tgttaataat ggaaatttct
     2461 tagtcggaaa ttcaccgaac aatttcggtt gattttccca cacctcatct aatgtctgtc
     2521 ctttaaaagg gccattcaaa atgcggttcg caccatgtgg atgagctgaa attccccata
     2581 cttccccagt atggtcactc ggtaaatcat aaccaaattg tgcgagattt gttccacccc
     2641 aaattctttc ttgaaacact ggttcgagta ttaatggcat tggggatcac ctctcattct
     2701 ttcatagttt gctcatattc attatgtatg tcagatatga tttgtgggcg tgacatagaa
     2761 atcatatata cgcatagatt tcatcgtgcc atcccgattt ggataactta aattgaaatc
     2821 aactcaaatg ttaacacgat ttcaattgcg ctatcagcga ctcctgtaaa acttaaaagg
     2881 gttctgttgc gcaccagacc atcgatgcga tgtctcaaca aaatagcaca ttaatctatt
     2941 gtcattgtaa cacatctaaa ataaaagcgc ttcagatttt agaaagtgta cagctttcta
     3001 aaattcaaag cactttacca ttcatatcgg atatattatt ttctattaaa tcgctacgtt
     3061 gtttttatac gcaaattttc tcatcattaa tgctcattga cgatatagtt ttcaacgagc
     3121 gtttgacgaa tttcagctaa gtgtgccgtc atcaagtttg cagatgctac actgtcttta
     3181 tttttaatcg cttctaaaat gacactatgc tcttccatta atttttccat cgtcttttgt
     3241 cgactgtaaa tataaatgtg tcgcgtccct ttcatcgtct gttgaatcaa gtccgcgata
     3301 ttattcaaca actcatacaa caaatgatta tccgacgctt tcgcgatagc tagatgaaat
     3361 ttcaaatctg cttcttctcc agattgatgg cgttcaatag ccccattcat ctcatctaaa
     3421 gcttcttcca tcactagaat ttcttcttct gttcgtcttg aagcggccaa tttcgccgtc
     3481 gcaacttcta ccacttcacg caattctaag atttcacgca cccttttttg tgtaagtgct
     3541 tgcgaggtaa agtcaaaaag taacggctgt ttttgcttaa cgaaagtgcc atatccatgt
     3601 ttaatatcaa tcaatccgat gattcgtaaa gcattcagcg cttcacgtat cgacgcatta
     3661 ctcaccccat actctgctgc caacttttga attgaaggta aacggtcgcc ctcttttaac
     3721 acgccctctt caatttgttg gatcaaaatg tctgcaattt gctcatatat tttttgattt
     3781 gaaatcttca tttacggctc cacaaccctt cgacattatt ttatcaaaaa agtagcgctt
     3841 tcacttgaat attgtgtgca tgcttgacaa tcattttaca ttttaaacca aaattgaatc
     3901 catttttgcc cttttttgtt ttcaaacgat accgattttt gataatgttg tgtatatgcg
     3961 aaaggagtgc tcacagttgt ttacatttac gaaactattt tggcacaata cgcaaaatca
     4021 aaaagctagg ctattcggaa ttgctttcat tggttttgca atattattat tactgacaat
     4081 attagccatg tcgccataca atcttttact acaagtatgg caaatgtcga tgttgacagg
     4141 gcaacagaat ttaacaacct taattttaat gatggttggc gcaatactat taacgatttt
     4201 tttattcgca atgctgattt tcccattttt tgtcggtgtc attagcgcca ttcatcatag
     4261 cattttaaat acgacaaaag cacgctggaa agatttattc cgtgcattca aaaaaggcgt
     4321 ttggggcaaa acggttattc ttggtatttt aacattgcta tttatcgtcg ttacggccat
     4381 tatttatgcc ctggtgaatg caggaatgac atttctcatt caacagattt tcaactgggt
     4441 gagcggcaca ggactgggac aaggcgtttt acaattcatc gtcagcatcc tgattgtact
     4501 gatttcattc gtattaagca tcgtcgtttg gtttgcagcg ctttacatta taaacattgc
     4561 tgtatcagtg aatgaagatg cttcaagaac gatcaaatca cattttaaag aagcagggtc
     4621 tggctttaaa aatggcaaac gaacattttt acgctttttt atcggtattt tattattgaa
     4681 cttaatcttt attattttaa atgagccgat taatttctta attcaacaaa gtttggcaca
     4741 tatgtcgcaa aacttggcgt attatttaat gatggtttta aacgttgtct tcttattgct
     4801 tcgttatgtt gtttatttat tgattattgg cacggctgtt caatattttg tgcgacgcgg
     4861 acgtaaagaa acgcatgttt aaaatttaat tttttgagga ttgctaatat ggattcgcgt
     4921 tcccagggga cttgcctcaa ctaaatttgg cttgattgaa gtgttcactt gatagaagcc
     4981 aaattggatt ttgggagcag tacagaaatc gcatgtgtca caaagatttc gtcgtactgc
     5041 ccccgcaagg atgactagac ttctcaaaag tatatgcatt gagaagtcag aca
//
LOCUS       DANHPA010000138         4963 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.139, whole genome shotgun sequence.
ACCESSION   DANHPA010000138 DANHPA010000000
VERSION     DANHPA010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 4963)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4963)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4963
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.139"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            194..433
                     /locus_tag="PTC28_002219"
     CDS             194..433
                     /locus_tag="PTC28_002219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002488644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDK5717457.1"
                     /translation="MNIQSKITEHKMILLKKGLSVTDYAKNLDINISYANQIINGKRS
                     PSPKLAKKMAEFLGVDIEKIFILSVVNNYDATTKQ"
     gene            411..671
                     /locus_tag="PTC28_002220"
     CDS             411..671
                     /locus_tag="PTC28_002220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HDK5717458.1"
                     /translation="MTQLLSNEASQHLVTEIVRIAEAVALERVRQNQKRYLNQTEVME
                     EYRCTHKDITKWEKAGLKKFRKGKSWIYDRKDIEQVLDSLKQ"
     gene            745..897
                     /locus_tag="PTC28_002221"
     CDS             745..897
                     /locus_tag="PTC28_002221"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717459.1"
                     /translation="MRVKRIALMFLLAYFLFTTFDFHIAGTLYMFSAIVVVLEAEYKA
                     VTQQEG"
     gene            901..1542
                     /locus_tag="PTC28_002222"
     CDS             901..1542
                     /locus_tag="PTC28_002222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012085715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage repressor protein"
                     /protein_id="HDK5717460.1"
                     /translation="MIKQIFNKKEIRFVEKDGEYWAVASDVAKILGFRDAFNATKNLP
                     EHVRGTLKGSTTSGKKKARKFQDYTVINEKGIYRLVMRSNKPEALDFQDWICDVLVEL
                     RQATGLKGFEVFRMLDKQKQKEAMDNLKNGIEGISRNDYLKAQTISNKAVSNVFGFAK
                     MLKKQDMTREMLELRQQILDETVEFMIFVNKYNLNLSISDHIYNKYTNNQKLA"
     gene            1606..1953
                     /locus_tag="PTC28_002223"
     CDS             1606..1953
                     /locus_tag="PTC28_002223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000403836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island protein"
                     /protein_id="HDK5717461.1"
                     /translation="MGLSQRKHLYKVVKVMEKAIVVKSTTSFYEQALKMIHKELFKIV
                     SYLKFDSEEYEIINEVVQTLDDVIHETQDIYHYSIIDDKGEHKHTTDRKGHIIGILEW
                     ALDYIVGNIEVEE"
     gene            1957..2277
                     /locus_tag="PTC28_002224"
     CDS             1957..2277
                     /locus_tag="PTC28_002224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1474 family protein"
                     /protein_id="HDK5717462.1"
                     /translation="MNWEIRNLFSEIEIVKEKINDAVTSFGWFEDEYFIHEPSHVLSM
                     NEVKIHGYKYHEHRIQIAQLCDLMHIYIERLDKQIQEFKEIEKASSAKFGDRTDNAEI
                     NNNL"
     gene            2292..3161
                     /locus_tag="PTC28_002225"
     CDS             2292..3161
                     /locus_tag="PTC28_002225"
                     /inference="COORDINATES: protein motif:HMM:NF020291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primase alpha helix C-terminal domain-containing
                     protein"
                     /protein_id="HDK5717463.1"
                     /translation="MNYIKYEIKNDTEKMKVQHYRNLSADSFEKEYHFCWSEFLNWLS
                     VKRIDPTNKYARGLMLCGEVKTGENDNVIKRRNNDNVVNRNMLVIDYDELDSSIDFIQ
                     TIYDRIGKLSYCIYSTYNHTPEKTRYRLVVPLSRPLDSKCYKNAIALFGEHIGLKYDE
                     SSKVASQVQALPVVKDKDSEFIFKVNDALILDTDELLKNVDIQKDKGGTASTFKKRAP
                     SHWQSIAMGVGAGERNIVLTQLIGYLLRRYVDPSLVYGLAYGWAKQCTPPIADKEITK
                     TFKSIYTKHTRKE"
     gene            3166..4821
                     /locus_tag="PTC28_002226"
     CDS             3166..4821
                     /locus_tag="PTC28_002226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF927 domain-containing protein"
                     /protein_id="HDK5717464.1"
                     /translation="MAELPHDVIEVINKEALADIIPTNYKVGDNGWLYKEVEKGKGDN
                     AKVVPVLITSTTPYISKKYKDIETGEFTYQLKFNSAEKENKHTVLARDLADATHIINL
                     ADRGFDVNTTNRVDLVNYVSMYMRLNPLPITRIVTRLGHVDRYFIHPLIKDVELAIYE
                     QGYKNIAKEFKTKGTLQDYAQNVFTIVSNSYPAMMLLYASCGSILLHDFDVEPFIVDL
                     SGASSRGKTTALKVASSVWGTSNLIGEWNTTRVNIERKSAFLNSFPLLLDDSRKANPY
                     MLPDVIYQFSGGREKGRGNKSSIEVERTWQNIMISTGETSLADNGKEKAGIGARIITL
                     QDDPFNSDVSFIDLYKGINSQYGTLGIAFMEQYNAEKEAYYRSFKSHEERLIEKAGDN
                     EIMARIGRNFALLQVAGEIINNIDGFEHDPYVTINQAYNSMLETNRNIDKPKQLLEGL
                     LDNLDGERNYITGPNYGEVYNGTVKAVFNKDYLCVLTDTVKSYLGDEFYTITAEWRSR
                     GYLITDKERIVKQVKYKGVRYRGYAIQTNVIEELGFDFRKESY"
BASE COUNT         1796 a          747 c         1046 g         1374 t
ORIGIN      
        1 ctatttctaa tcatttttta ttacctcact taaagattta tattcttata ttcgtataaa
       61 ttaaaaaata agtcaatgaa taataaacaa acgcacaaga aagttgtcgt ttttgttgac
      121 gtatgttcta ctttgtgttt ttatataatt atcaaatgcg caggaaagtt gtcattaggg
      181 aaggattgtt gttatgaata ttcaaagtaa aatcactgag cataagatga tattgctgaa
      241 aaagggtcta tcagtaacag actatgcgaa aaatttagat attaatattt cttatgcaaa
      301 tcaaataatt aacgggaaaa gaagcccctc gcctaagcta gctaaaaaaa tggccgaatt
      361 tttgggggtc gatattgaaa aaatatttat tttaagtgtg gtgaacaact atgacgcaac
      421 tactaagcaa tgaagccagc cagcaccttg taaccgagat tgtgaggatt gcggaagcgg
      481 tggcattgga gagagtaaga cagaatcaaa aacggtacct taaccaaacg gaagtaatgg
      541 aggaataccg ttgtacccac aaggacatta ccaagtggga gaaagcagga ctcaaaaagt
      601 tcaggaaagg caaaagttgg atctatgaca gaaaagacat tgaacaggta ttagatagtt
      661 taaaacaata gtaaattaac agcgcccgca tgcgtgagag agcaaacagt accatgttta
      721 tagtctttaa aaggtggtga gaccatgaga gtaaaacgta ttgcactaat gtttttgctg
      781 gcgtatttct tatttaccac attcgacttt catatagctg gcacattgta tatgttcagt
      841 gccattgtcg tggtgttaga agcggaatat aaagctgtaa cacaacagga gggataacaa
      901 gtgattaaac aaatttttaa caagaaagaa atacgatttg tcgaaaaaga cggagagtat
      961 tgggcggtag caagtgatgt agcaaagatt ctagggttta gagacgcatt taatgctaca
     1021 aaaaacttac ccgaacatgt aagaggtact cttaaaggta gtaccacatc aggtaagaag
     1081 aaagctagaa aatttcaaga ttatacagta atcaatgaaa aaggtatcta tcgccttgta
     1141 atgaggtcta acaagcccga agcattggac tttcaagatt ggatttgtga tgtacttgtt
     1201 gagttacgac aagcaaccgg tcttaaaggt tttgaagtgt tccgcatgtt agataagcaa
     1261 aaacaaaaag aagctatgga caacttgaag aatggcattg agggcatttc tcgaaatgat
     1321 tatttgaaag cacaaacaat cagtaacaaa gcggtatcga atgtatttgg ctttgcaaag
     1381 atgcttaaaa agcaagatat gacaagggaa atgttggaat taagacaaca aatattagat
     1441 gaaactgtag agttcatgat ttttgttaat aaatataatc ttaatttatc tataagtgac
     1501 catatttata acaagtacac caataatcag aaattagcat agccattgtg atgatgcttg
     1561 gagcggaata caaagcagta gcacataagt aaggagtgaa tataaatggg attgagtcag
     1621 agaaagcatt tgtacaaagt ggtcaaagta atggaaaagg ccattgttgt gaaaagtact
     1681 acaagttttt atgagcaggc actcaagatg attcataaag agctattcaa aattgtgtcc
     1741 tatttaaagt ttgacagtga agaatacgaa atcattaacg aagttgtgca gacattagat
     1801 gacgttatac acgaaacgca agacatatac cattacagca ttatagatga caaaggtgag
     1861 cataagcata caacagaccg caaaggtcac atcattggaa tactggaatg ggcattggac
     1921 tatattgtag gaaatattga agtggaggaa tagaaaatga attgggaaat tagaaatcta
     1981 tttagtgaaa ttgaaatagt taaagagaaa atcaatgatg cagttacttc ttttggatgg
     2041 tttgaagatg aatattttat acatgaacct agtcacgtgt tgagtatgaa cgaagtgaaa
     2101 atacatggct ataaatatca tgaacaccgt attcaaattg cgcagttatg cgacttaatg
     2161 cacatatata ttgagcgact cgacaagcaa attcaagagt ttaaagaaat agaaaaagcg
     2221 tcatcagcga agtttggcga cagaactgat aacgcagaaa taaacaataa tctttagaaa
     2281 ggattatcta tatgaattat atcaaatatg agataaaaaa cgatactgaa aagatgaaag
     2341 tacaacatta taggaatcta agcgcagata gttttgaaaa agaatatcac ttttgttgga
     2401 gcgagtttct taattggttg agcgtgaagc ggattgaccc tactaacaaa tatgcaaggg
     2461 ggttaatgct atgcggtgaa gtgaaaacgg gtgaaaatga taacgtcatt aagcgtcgta
     2521 acaatgataa tgtggtcaac agaaacatgt tggtgattga ttatgatgaa ttagacagtt
     2581 caattgattt tatccaaacg atttatgacc gtatcggcaa actttcatac tgtatttatt
     2641 caacttacaa ccacacaccc gagaaaacac gttatcggct cgttgtacca ctttcaaggc
     2701 cgttagatag taagtgttac aaaaatgcta ttgcattgtt tggtgagcat atagggctta
     2761 aatacgatga atcttcaaag gttgcgtcac aagttcaagc gttgccagtt gttaaggata
     2821 aagatagcga atttatcttt aaggtgaacg atgccctcat acttgataca gatgaattgt
     2881 tgaagaatgt tgacattcag aaagataaag ggggtaccgc ttcaacattt aaaaaaagag
     2941 ccccctcaca ttggcaatct atcgcaatgg gtgtgggtgc aggtgaacgt aatatcgtac
     3001 ttacacagct cattggctat ttgttacgcc gatatgtcga ccctagtctt gtatatgggt
     3061 tggcgtatgg ttgggctaag caatgcacac caccaatagc agataaggag attacaaaga
     3121 cgtttaaaag tatttataca aagcacacaa gaaaggagtg attaaatggc cgagcttcct
     3181 catgacgtta tagaggtcat caacaaagaa gcacttgccg acattatacc gaccaattat
     3241 aaagttggcg acaatggttg gctatataag gaagtcgaga aaggtaaggg agataatgca
     3301 aaagtggtac cagtgttaat cacttcaaca acaccatata ttagcaagaa atataaagac
     3361 attgaaacgg gtgaattcac atatcaactc aagttcaata gtgctgaaaa agaaaacaag
     3421 catacagtat tggcacgtga tttagcagac gctacacaca ttattaattt ggctgacagg
     3481 ggttttgatg tgaacacgac caaccgtgtg gatttagtta attatgtcag catgtatatg
     3541 cgacttaatc cattgccgat aacaagaatt gtcacacgtt taggtcatgt agaccgatac
     3601 ttcattcacc ctttaattaa agatgttgag ctagctattt atgaacaagg atacaaaaat
     3661 atcgcaaagg aatttaaaac aaaaggtaca ctacaagatt atgcgcaaaa tgtatttact
     3721 attgtttcaa actcataccc tgccatgatg ttattgtatg cgtcttgtgg ctcgatacta
     3781 ttgcatgatt ttgatgttga accttttatc gttgatttaa gcggagcaag ctcacgaggt
     3841 aaaacaacag cgttaaaggt cgctagcagt gtgtggggaa catctaacct tatcggggaa
     3901 tggaatacca caagggtgaa tatagaacgt aagtcggcat ttttaaatag ttttccgttg
     3961 ctattagacg attcaagaaa agccaacccc tatatgttac ccgatgtgat ttatcaattt
     4021 agtggtggtc gtgaaaaagg tcgtggtaat aagtctagca ttgaagttga acgcacatgg
     4081 caaaatatca tgatttcaac tggagaaacg tcattagccg ataatggaaa agaaaaagct
     4141 ggtatcggtg caaggattat cacattgcaa gatgacccct ttaatagtga tgtgtctttt
     4201 attgacttat ataaaggcat aaacagccag tacggcacgc taggtatagc attcatggaa
     4261 caatacaatg cggagaaaga ggcttattat cgttcgttta agagccatga ggagcgtctt
     4321 attgaaaaag ccggagacaa tgaaatcatg gcacgtattg gtcgtaattt tgctttatta
     4381 caagttgctg gtgaaatcat caacaacatt gatggttttg aacacgaccc ctatgtcaca
     4441 ataaaccaag catataacag catgctagag actaacagaa atattgataa gcctaagcag
     4501 ttactcgagg gactactaga caatttagat ggtgaaagaa attatattac tggtccaaac
     4561 tatggtgagg tctacaatgg aacggttaaa gcggtattta acaaagatta tttatgtgtg
     4621 cttaccgata cagtcaaaag ctatctaggg gatgaatttt acactataac tgctgaatgg
     4681 agaagtagag gatacctcat aacagataaa gaaagaattg taaaacaagt aaagtacaag
     4741 ggtgttaggt atcgtggata tgctatacaa acaaatgtca ttgaagagtt aggatttgat
     4801 ttcagaaaag aaagttatta gagtaccacc ggtcacactt cggtaacacc tatttttgta
     4861 taaagtggta ccgttcaaaa ccttgtgtat caagagttac agcataatag taccactagt
     4921 accacttatt ttataaataa atatatatat agagttacgt att
//
LOCUS       DANHPA010000139         4887 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.140, whole genome shotgun sequence.
ACCESSION   DANHPA010000139 DANHPA010000000
VERSION     DANHPA010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 4887)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4887)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4887
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.140"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            97..312
                     /locus_tag="PTC28_002227"
     CDS             97..312
                     /locus_tag="PTC28_002227"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717465.1"
                     /translation="MADHWNFESRQVLHCPTVEDIKDELAIARYNVQTKKYELIFRNG
                     YEWDVTPVKVTEDGIIFLEDEVSEYVA"
     gene            302..664
                     /locus_tag="PTC28_002228"
     CDS             302..664
                     /locus_tag="PTC28_002228"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717466.1"
                     /translation="MWHKIRIDLTQIEYETGRATLIKLPNSSRLKGWQFWHPSKLVRE
                     SEKGNGHWFEFSFNDEWEFKLIRQSRNNDATTTIGADEMLDAFDKQSPRSDSETYLKV
                     SEPEKINANVEVDESLKR"
     gene            724..1875
                     /locus_tag="PTC28_002229"
     CDS             724..1875
                     /locus_tag="PTC28_002229"
                     /inference="COORDINATES: protein motif:HMM:NF012403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717467.1"
                     /translation="MKQGTGKTRAALEIAKSTDATLVLILVPHQLQKNIEEQIEMWGF
                     DMPHIIETYEGISMSDTRYLTLLDNLNDQKVMVIADESIFIKNGDAKRYKRILNIRDR
                     SEYRLILNGTPITKNEWDIYYQMKFLSEKIINMDESEFLQTFFKKIEYKRRFQSPREF
                     YQLSEVNIDYLKKLIEPYVFEVDLNLCIEEKHTFEDIWSSDETSEKYNVLKEEFLQKI
                     KDGELLLNTLVNMQYLMFTDEKRCKEIAASLKGQQIVYCCYLKEVEQISKHCDCYVIT
                     GDTDNRSEVLKRFKGDDKPLIMTYGVGSFGHNLQFCNRITFASITFDYAKVEQAMYRI
                     KRLGQERIIHYRYIRSDLGIYNLMYDNLTKKSNLHDLIIRDLEKIKEVL"
     gene            1875..3164
                     /locus_tag="PTC28_002230"
     CDS             1875..3164
                     /locus_tag="PTC28_002230"
                     /inference="COORDINATES: protein
                     motif:HMM:NF013658.1,HMM:NF023349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3440 domain-containing protein"
                     /protein_id="HDK5717468.1"
                     /translation="MKQYLDMNVYEAAKERVRYIFDEFDNIYVSFSGGKDSGVCMHLM
                     CDEARRRNRKIGVLFIDTEAQYQFTIEYVESILKEYTDVIKPMWVCLPMETDNNLSYS
                     EMLWSWWDPDKKDVWVRDIPKNVINLDNNPIDYYRYKMTFEEFVSKFGKWYGKGEKTA
                     CIIGIRTQESLNRWRAIKGDKSTYNDIKYSTKVDTDVYNFYPIYDWTVEDVWTFYGKT
                     VHKYNKFYDLMYQAGISIHKMRIDEPFGDEAKAGLNMFRILEPQTWGKVVNRVSGANF
                     GNIYSGTKINSHKYQLPRGHTWKSFTEFLLNTLPEEAANHYKDRFEKFINWWIEKGSG
                     MTDEEIDILESKYGDKIINTHERSKRGKGDKNVIKFKEVIDEIPELDTKQDVLSWKRM
                     AMCIIKNDYWCKSLSFGITKEQQRRRKEAMEKYKEVL"
     gene            3158..3664
                     /locus_tag="PTC28_002231"
     CDS             3158..3664
                     /locus_tag="PTC28_002231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009269767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB-like nuclease domain-containing protein"
                     /protein_id="HDK5717469.1"
                     /translation="MMMKSPVYNVNAVPIDKIQANSYNPNAVAPPEMKLLYQSIKQDG
                     YTMPIVCYYLPEVDKYEIVDGFHRYTIMLKHKDIFERENGMLPVSVIDKPISDRMAST
                     IRHNRARGSHSIDLMVNIVNELVEAGMSDKWILKNIGMDADELLRLKQVSGLAALFKD
                     KDFNKAWK"
     gene            3822..4301
                     /gene="tadA"
                     /locus_tag="PTC28_002232"
                     /pseudo
     CDS             3822..4301
                     /gene="tadA"
                     /locus_tag="PTC28_002232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165230.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly complex ATPase component
                     TadA"
     gene            4270..>4887
                     /locus_tag="PTC28_002233"
     CDS             4270..>4887
                     /locus_tag="PTC28_002233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HDK5717470.1"
                     /translation="MKRFYESIRFKRTLRQLHVQHILIMERLYQLLLHGFTFAEAMLF
                     IYEQLNIRHPTFENQLIEKLKGGANCYDIFRMFGYPETILMQLYFAERYGSLPETLKL
                     CHQFYTKNRKLKKQLIKTIQYPIVLILIFLALIVTLNHTVMQQFDQMYETMQLNQSSL
                     QYIVKMFIQNFPAIFLIILLVIVSTYYIVKLRLNHLPIKRQVHFLT"
BASE COUNT         1697 a          789 c          996 g         1405 t
ORIGIN      
        1 gagttctcaa gagatttttc gaagtcgccg tttagtctat ctgcatacaa ctcaaccgac
       61 atttcatggg gacacaaacc tgatggaagt ctaagagtgg cagatcattg gaatttcgaa
      121 agtagacaag tccttcattg tccaacagtt gaagatatta aagatgagct agccattgcc
      181 cgttacaatg tgcaaacaaa aaaatacgag ctcatcttta gaaatggtta tgaatgggat
      241 gtcactccag ttaaagtaac tgaagatggc ataatctttt tagaagatga ggtgagcgag
      301 tatgtggcat aaaattcgca tagacctcac gcaaattgaa tatgagactg gccgggcgac
      361 tttaatcaag ttgcccaact cttctagatt aaagggttgg caattctggc accctagcaa
      421 actagtgaga gagtcagaaa aaggaaacgg gcattggttc gagttttctt tcaatgatga
      481 atgggagttc aagctcattc gtcagagtag aaataatgat gcgactacaa caattggagc
      541 agatgaaatg ttagatgctt ttgataaaca gtcgcctcgc tcagattcag aaacctattt
      601 aaaagtttct gaacctgaaa aaataaatgc taatgtggag gttgatgaat cattaaaacg
      661 ttaaccttag agcaggaaac tgctattaaa aaattcgctc acttaaaagt gggcgctttg
      721 tttatgaaac aaggaacggg caaaacacgt gctgcactcg aaatcgcaaa gtcgactgat
      781 gcaacgcttg tattgattct agttcctcat caattacaaa agaatattga ggagcagata
      841 gaaatgtggg gttttgatat gcctcatatt attgagacgt atgaaggtat ctctatgtcc
      901 gacacacgtt atttaacttt gttagataat ttaaacgacc aaaaggtgat ggtcatcgcc
      961 gatgaaagta tattcatcaa aaatggcgat gctaaacgat ataaacggat tttgaatatc
     1021 cgtgaccgtt cagaatatag acttattttg aatggaactc ctattactaa aaatgaatgg
     1081 gatatatact atcagatgaa gttcctaagt gaaaaaatca ttaatatgga tgaatcagaa
     1141 tttcttcaga cgttcttcaa aaaaatcgag tataagagga ggtttcagtc tcctcgtgag
     1201 ttttatcaat tgtcagaggt aaatattgat tacctgaaaa aattgataga accctatgta
     1261 tttgaggttg atttgaacct ctgtatagaa gaaaaacata cgtttgagga tatttggtca
     1321 agtgatgaga catccgaaaa gtataacgtt ttaaaagaag aattcctcca aaaaataaaa
     1381 gatggagaac ttcttttaaa tacactcgta aacatgcagt acctcatgtt cactgatgaa
     1441 aaacgatgca aagagattgc agcatcgtta aaaggacaac aaattgtata ttgttgctat
     1501 ttgaaggaag ttgagcagat aagcaaacat tgtgattgtt atgtgataac aggtgacaca
     1561 gataatcgca gtgaggtttt gaagcggttt aaaggtgacg acaagccact gattatgacc
     1621 tatggtgttg gctcttttgg tcataattta caattctgta accgcattac ttttgcaagt
     1681 atcacgtttg attacgcaaa agtagagcag gcaatgtata gaatcaagcg cttaggtcaa
     1741 gaacgcatca tacattatag atacattaga tctgatttag gtatttataa cttgatgtac
     1801 gataatctca caaaaaaatc gaacttacac gatttgatta ttcgagattt agaaaagatt
     1861 aaggaggtat tatgatgaag cagtatttag atatgaatgt ttatgaagct gcaaaagaac
     1921 gtgtacgcta tatatttgat gagtttgata atatttatgt gtcattctct ggcggtaaag
     1981 atagtggtgt gtgcatgcat ttaatgtgtg atgaagcacg tcgacgcaac cgcaaaatag
     2041 gtgttttgtt tatcgacacc gaagcacagt atcaatttac aattgaatat gtggaaagca
     2101 tcttgaaaga atacactgac gttattaaac caatgtgggt atgcctgccg atggaaacgg
     2161 ataacaactt aagttattct gagatgctat ggagctggtg ggatccggat aaaaaagatg
     2221 tatgggtgcg tgacatacct aaaaacgtta tcaacttaga taataaccca atcgattatt
     2281 atcgctataa aatgacgttt gaagaatttg tttcgaaatt tggtaaatgg tacggcaagg
     2341 gcgaaaaaac ggcgtgtatc attggaatac gcacacaaga aagtcttaat cgttggcgtg
     2401 caatcaaagg ggataaaagc acgtataatg atataaaata cagtaccaaa gtagacacag
     2461 acgtgtacaa cttctatccg atttatgatt ggactgtaga ggatgtttgg actttttacg
     2521 gtaaaacggt acataaatac aacaaatttt atgacttgat gtatcaagct ggtataagta
     2581 ttcataaaat gcgtattgac gagccgtttg gagatgaagc taaagcagga ttaaatatgt
     2641 tccgtattct cgaaccgcag acgtggggta aagtggtaaa tcgtgtgagt ggtgctaatt
     2701 ttggtaatat ctacagcggg actaaaatca atagtcataa atatcaatta ccaagggggc
     2761 acacgtggaa gtcgttcact gaattccttc tgaacacttt gcccgaagaa gcggcaaacc
     2821 actacaaaga tagatttgaa aagtttatca attggtggat agaaaaagga agcgggatga
     2881 ctgatgagga aatcgatata ttggaatcaa aatacggtga taagattatt aacacacatg
     2941 aacgttctaa acgtggtaaa ggcgataaaa acgtaattaa atttaaagag gtgattgatg
     3001 agatacctga actcgacaca aagcaagatg tgttgagttg gaaacgtatg gcgatgtgca
     3061 tcattaaaaa tgattattgg tgcaagtcac taagttttgg aatcacaaaa gagcagcaac
     3121 gtcgtcgtaa agaagcgatg gaaaaataca aggaggtatt atgatgaaaa gcccagttta
     3181 taacgtgaat gcagtgccta ttgataagat acaagcaaat agctacaatc caaatgccgt
     3241 tgcaccacct gaaatgaaat tgttgtatca atccatcaaa caagatggtt atacaatgcc
     3301 gattgtgtgt tactatttgc ccgaagtaga taaatatgaa attgtcgatg ggtttcatag
     3361 gtatacaatt atgttgaaac ataaagacat tttcgaaagg gaaaatggta tgttgcccgt
     3421 ttctgtaata gataaaccga tttcagatag aatggcgtct acaattagac ataacagagc
     3481 aagaggctca cacagtattg acctaatggt taatattgtg aatgaattag ttgaagcggg
     3541 tatgtcagat aaatggatat taaaaaatat aggtatggat gccgacgaac tgttaaggtt
     3601 gaagcaagta agtggtcttg ctgcactatt taaagataaa gactttaata aagcatggaa
     3661 ataaaaatca ccccgcctgc aataggtggg gcatttttaa gggcaaaaaa agggcagaat
     3721 ttatggaaag cgtaaaacac gcatggacaa aatagctaaa aaaccttatt aaatcaatgt
     3781 ttttgtacac ctatacacac gtatacatca cattccagta tccggtcgag cagcttgtga
     3841 acggcattac gcaaatttcc gttaacgaaa aagctgatat tacgtatgga tcgtcgttaa
     3901 aagcaattct tcgttgtgat ccagatgtca tcttaattgg tgagattcgt gacagtcata
     3961 ttgcaaggga cgttatacaa gcgagtttaa gtgggcattt agtattgtcg acgatacacg
     4021 ccaatgattg tcaaggggtg ctccttagac tgattgaaat gggactctct caccaagatt
     4081 tatctcaatc tatcaatctc atcatcaatc aaagactcat tacaacaaaa aacgaccagc
     4141 gacaactcgt ctatgaaacg atggatcaac aggagattca ttactttttg aataataact
     4201 tccaactacc tactgctttc acaagccttt ctcataagct tcaacttctg aataaagagg
     4261 gggttataga tgaaaagatt ttacgaaagt atacgattta aacgcacgtt aagacaactt
     4321 catgtgcaac acatactcat tatggagcgc ctctatcaat tattattaca tggttttact
     4381 tttgctgaag cgatgttatt tatatatgaa caactcaata tacgacatcc tacatttgaa
     4441 aatcaactca tcgaaaaatt aaagggaggt gcaaattgct atgacatttt tcggatgttt
     4501 ggttatcctg aaaccatttt gatgcagctt tattttgctg aacggtatgg atcactaccc
     4561 gaaacgttaa aattgtgtca tcagttttat accaaaaacc gcaaacttaa aaaacagctg
     4621 attaaaacta tccaatatcc gatcgtactc attttaatct ttctcgcgct gattgtgact
     4681 ttgaatcaca cggtcatgca acaatttgac caaatgtatg aaacgatgca attgaatcaa
     4741 tcctcattgc aatatattgt taagatgttc attcaaaact tcccagccat cttcttaatc
     4801 atattactcg tgattgtttc aacttattat attgtcaaat tacgtttgaa ccatctccca
     4861 attaaacgcc aagttcattt tctaacc
//
LOCUS       DANHPA010000140         4842 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.141, whole genome shotgun sequence.
ACCESSION   DANHPA010000140 DANHPA010000000
VERSION     DANHPA010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 4842)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4842)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4842
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.141"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            72..1976
                     /locus_tag="PTC28_002234"
     CDS             72..1976
                     /locus_tag="PTC28_002234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triacylglycerol lipase"
                     /protein_id="HDK5717471.1"
                     /translation="MHKINKRNTFALRKRPMGVSSILIASGLLMFAGHDGKAAERSAS
                     QDVGVVAKQQELSLYQQKDGDEPTRHDAPTVVNHERETTKKASVDHLHTYTRSSDTTT
                     VSKELDNEKIYGTVPPSPRVPKDQSNEATPVKTEDSHTQLTQKPELDSEFSAIENDNK
                     EAKEQTKHAQRPESDFSVVEQQHKDKYITREVKQAPKVVEASTEDVAPTDADKRNKGV
                     VPDSKINTPSPRLTTHSETQATSAPTITKLDKSAVENKWKHKDPIIFVHGFSGLVGDN
                     APKGSNYWGGTKYKMIEELRHAGYNVFEASVSAFGSNWARAAELYAYIKGGIVDYGAA
                     HAAKYGHQRYGKTYEGILPNWHSDQKIHLVGHSMGGQTIRLLEQLLRNGDLEEMAYQK
                     EYGGTISELFQGNQDNRITSITTIATPHDGTVASDDLGNTEIIKRLLYEYNVFAGRTG
                     QTIDYGLKHWGLEQREGETYAEYAKRASKSPLFTSQDTALYDLTREGAKKLNARTDLN
                     PNIYYKTYTGSATCETIFGTQIAHPYMNIAHVLTGDLIGMTENPAWRENDGLVSVISS
                     QHPEDEAFEFVDFTAPAVKGIWQVTPTLKGWDHTDFTGKDVLDWRRSGAELQNFYHRL
                     VEDLVRKEEV"
     gene            2171..2428
                     /locus_tag="PTC28_002235"
     CDS             2171..2428
                     /locus_tag="PTC28_002235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HDK5717472.1"
                     /translation="MIIKTPTNARKEFYELLKQVNDNHEPIIISGSKSENNAVIVSQE
                     DWDGIQETLFLEYTGTMDKVRAREKDDSGYTNIDDIDWDNL"
     gene            2428..2694
                     /locus_tag="PTC28_002236"
     CDS             2428..2694
                     /locus_tag="PTC28_002236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Txe/YoeB family addiction module toxin"
                     /protein_id="HDK5717473.1"
                     /translation="MGNYSVLIKNSAKNDLKKIKKSLLKEQFSKIIEVLKINPYEASQ
                     SFEKLQPKHSARYSRRLNHQHRVVYTVDDEKREVYIFSAWSYYE"
     gene            complement(3055..3156)
                     /locus_tag="PTC28_002237"
     CDS             complement(3055..3156)
                     /locus_tag="PTC28_002237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016898541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2648 domain-containing protein"
                     /protein_id="HDK5717474.1"
                     /translation="MKKLLVVATVLTAAFVALKRYQEHVNKAPNIEY"
     gene            complement(3170..4663)
                     /gene="mqo"
                     /locus_tag="PTC28_002238"
     CDS             complement(3170..4663)
                     /gene="mqo"
                     /locus_tag="PTC28_002238"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase (quinone)"
                     /protein_id="HDK5717475.1"
                     /translation="MPTQSEPKDIVIIGAGVLSTTFASMIKDLEPEWNLKLYERLDSP
                     GVESSNERHNAGTGHAALCELNYTVKQPDGSIDIEKAKEINEEFEISKQFWSHLVKSK
                     NIDTPRDFINPLPHISFVRGKNNVQFLKDRYNKMKDFPMFDNIEYTEDIEVMRKWMPL
                     MMQGRSASDIMAASKIDEGTDVNFGELTRKMAKSIEAHKNADVHYNHEVRDFNRRKDG
                     KWEVTVVNRNTGESHVQLADYIFIGAGGGAIPLLQKTGIPESKHLGGFPITGQFLMCT
                     NPDVIEEHGVKVYGKEPPGTPPMTVPHLDTRYINGRKALLFGPFASIGPKFLKNGSNL
                     DLFKSVKPYNITTLLAAAVKNLPLIKYSIDQILMTKEGCMNHLRTFYPEAKDQDWELY
                     TAGKRVQVIKDTEEYGKGYIQFGTEVVNSQDHTVIALLGESPGASTSVSVALEVLERN
                     FAEYVPEWTPKLQEMIPSYGKSLIEDVDLMRKIRQQTSKDLELNYYE"
BASE COUNT         1587 a          834 c          960 g         1461 t
ORIGIN      
        1 aaactttaac tatatacaga tggatttgtt atattgggag tgtcaccatt aaatttcaag
       61 ggggaataca attgcataaa attaataaac gtaacacttt tgcactgaga aaacgaccaa
      121 tgggtgtttc atcgatttta attgcatcgg ggttgttgat gttcgcaggg cacgacggaa
      181 aagcagcaga aagaagtgca tctcaagacg taggagttgt agccaaacaa caggaattat
      241 cactctacca acagaaagat ggagatgaac ccacgcgtca tgatgctccg actgttgtaa
      301 atcatgaacg agaaacgaca aaaaaagctt ctgttgacca ccttcataca tatacacgct
      361 cttcagatac aacaactgta tctaaagaac tcgacaatga aaaaatatat ggtacagttc
      421 caccatcacc gcgagttcct aaagatcaat ctaacgaagc cacgcctgta aaaacagaag
      481 atagccatac tcaattaaca caaaagccag agttagattc tgagttttca gctattgaaa
      541 atgacaataa agaagcaaaa gaacaaacaa aacatgcaca acgaccagag tcagattttt
      601 cggtagtaga acaacaacat aaagacaagt atattacgag agaggttaaa caggctccta
      661 aagtggtaga ggcatcaaca gaagacgttg caccgacaga cgctgataaa aggaataaag
      721 gcgttgtacc agattcaaaa ataaacaccc cctcaccgcg tctaacgaca cacagtgaaa
      781 cacaagcaac ttcagcaccg actataacaa aacttgataa atcggctgtt gaaaacaagt
      841 ggaagcataa agatccaatc atttttgttc atggcttttc tggcttagta ggtgataatg
      901 cgccgaaagg ttcgaattat tggggcggga caaaatacaa aatgattgaa gaactgcgtc
      961 atgcgggtta taacgtattt gaagcgagcg taagtgcatt tggaagtaac tgggcacgtg
     1021 ctgctgaatt atacgcttat attaaaggcg gtatcgttga ctacggggcg gcgcacgcag
     1081 caaaatacgg tcatcaacgt tacggtaaaa catatgaagg tattttacct aattggcact
     1141 cagatcaaaa aatacattta gtaggtcata gtatgggcgg acaaacaatt cgccttttag
     1201 aacaattatt gcgtaacgga gatttagaag aaatggcgta ccaaaaagag tacggtggca
     1261 caatcagtga acttttccaa ggcaatcaag ataatagaat tacttcgatt acgacaattg
     1321 cgacgccaca tgatgggact gttgcgtcag atgatttagg taatacagaa atcattaaac
     1381 gcttgctata tgagtacaat gtatttgcag ggcgtacagg acagactata gattatggct
     1441 taaagcattg gggattagag caacgtgaag gggaaaccta cgctgaatat gcaaaacgtg
     1501 ctagcaaaag ccctcttttt acatctcaag atacggcatt gtacgattta actcgtgaag
     1561 gagcgaaaaa acttaacgca cgtacagatt tgaatcctaa tatttattac aagacgtata
     1621 caggctctgc cacatgtgaa acgatttttg gtacacaaat tgcacatcct tacatgaata
     1681 ttgcgcacgt cttgactggt gacttaatcg gtatgacaga gaaccccgct tggagagaga
     1741 atgatggcct cgtttcagtt atttcatcac agcaccctga agatgaagcg tttgagtttg
     1801 tcgattttac tgcgccagct gtcaaaggga tctggcaagt cacgccaaca ttaaagggat
     1861 gggaccatac tgactttact ggtaaagatg tactggattg gcgacgaagc ggtgcggagt
     1921 tgcaaaactt ttatcatcgt ttagtagaag atttagtacg taaagaagaa gtatagcgca
     1981 gtgaaaaaag gttccataca atagggttga tgatttgtga aatagtcata cgtaaacttg
     2041 aaatgaaata ctttaaacat aggtcaatat gttgtttgta tttttaatca gaattgagaa
     2101 agtcatatca tttgcgtacg taaaaacgta cgcaaatgat atgactatac tagtaaagga
     2161 agagatgtta atgattatta aaacgcctac aaatgctaga aaagagtttt acgagttgtt
     2221 aaaacaagtt aatgataatc atgagcctat tataataagt ggttctaaaa gtgaaaacaa
     2281 tgcagttatt gttagtcagg aagactggga tggtattcaa gaaacgttat ttctcgaata
     2341 cactggtact atggataaag taagagcacg tgaaaaagat gatagtggtt ataccaatat
     2401 tgacgatata gattgggata atttgtaatg ggtaattatt ctgtcttaat taagaattca
     2461 gccaaaaatg acttgaaaaa aattaaaaag tcacttctta aagagcaatt ttcaaaaatt
     2521 attgaagttt taaagattaa cccttatgaa gctagtcaat cttttgagaa gctacaaccg
     2581 aagcattcag ctcgatattc aaggcgtctg aatcatcaac atagagttgt gtatacggtt
     2641 gatgatgaaa aaagagaagt ttatattttt tctgcttggt catattatga gtgagcgata
     2701 tgtaaataag tgctgtgaaa gcattgatag tgagttatat tgaaacaaca tgattaaaag
     2761 tgaataagaa caaggccatg atttaaaaat cgtgttttac aataccgtga atgtctgaga
     2821 aagcaatgga gtgtatgttt ttaaaagtga cattatttcg gttaaagcgt tgttactact
     2881 ctattgttga agcttctatc gttaagtgtg acagtttact tcttagtata tatgttgagt
     2941 gatgttgaat aacgacgctg acatcagttc atatggcgca tcagtccagt ttggcaagat
     3001 attttgaaaa agcccgatat ctctataata gagatgtcgg gctttttgca tgctttaata
     3061 ttcaatatta ggtgctttgt tgacgtgttc ttgataacgt tttaaagcaa cgaaagctgc
     3121 agtgagtaca gttgcaacga ctaataattt tttcatgata gcaactcctt tactcgtagt
     3181 agtttaattc taagtctttt gaagtttgtt gacgtatttt tctcattaaa tcaacatctt
     3241 caattaatga tttaccataa gaaggaatca tttcttgtaa tttaggtgtc cattcaggta
     3301 cgtattcagc aaagttgcgt tctaatactt caagtgccac agacactgat gtagaagccc
     3361 ctggtgattc acctaataaa gcaataacag tatggtcttg tgagtttact acttctgtac
     3421 cgaattggat gtaaccttta ccgtattctt cagtatcttt aatcacttgt acacgtttac
     3481 cagcagtata taattcccaa tcttgatctt tagcttcagg gtagaatgta cgtaagtggt
     3541 tcatacaacc ttctttagtc attaagattt gatcgattga gtatttaatt aacggtaagt
     3601 ttttcaccgc agcggcaagt aaagtagtaa tattgtatgg ttttacagat ttgaataaat
     3661 ctaagttcga accatttttc aagaatttag gaccgatgct tgcgaaaggt ccgaataata
     3721 atgctttacg gccgttgata taacgtgtat ctaagtgagg tacagtcatt ggtggtgtac
     3781 caggtggctc tttaccgtat actttcacac catgttcttc gataacatct gggtttgtac
     3841 acattaagaa ttgtcctgta attgggaaac cacctaaatg tttactttca ggaatacctg
     3901 ttttttgtaa caacggaatc gcaccgccac cagcaccgat gaagatatag tctgcaagtt
     3961 gtacatgtga ctcacctgta ttgcggttga ccactgtaac ttcccattta ccatctttac
     4021 gacggttgaa gtctctaact tcatggttat aatgtacatc tgcattttta tgcgcttcga
     4081 tacttttagc catcttacga gttaattcac cgaagttaac atcagtacct tcgtcgattt
     4141 tacttgcagc catgatgtcg ctagcactac gaccttgcat catcaacggc atccattttc
     4201 tcatcacttc aatatcttct gtatattcaa tattgtcgaa cattgggaaa tctttcattt
     4261 tattataacg atcttttaag aattgaacgt tattcttccc gcgtacgaag ctaatgtgtg
     4321 gaagaggatt gatgaaatct cttggtgtat caatgttttt acttttaaca agatgactcc
     4381 aaaattgttt tgagatttcg aattcttcat tgatttcttt tgctttttcg atgtcaattg
     4441 agccatcagg ttgtttcact gtatagttca attcacaaag tgcagcatgg ccagtaccag
     4501 cattatgacg ctcgtttgaa ctttctacac ctggactgtc taggcgttca tataatttaa
     4561 gattccattc tggttctaaa tctttaatca ttgaagcgaa agtcgtactt agcacaccgg
     4621 caccaataat gacaatgtct ttaggttctg attgagttgg catacataat cacctttcgt
     4681 ttgttgtata ttgcggaata tgataggaaa tcaagtcctt tgcatcactt cttaattatt
     4741 atagtacatt ttctatacta aaaaaaatga agcgcttgaa ttgtgacaga attgatacca
     4801 ctttgtaaag attgtaaaca aaatgaacaa tcatacttcg ca
//
LOCUS       DANHPA010000141         4773 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.142, whole genome shotgun sequence.
ACCESSION   DANHPA010000141 DANHPA010000000
VERSION     DANHPA010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 4773)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4773)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4773
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.142"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..211
                     /locus_tag="PTC28_002239"
     CDS             <1..211
                     /locus_tag="PTC28_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDK5717476.1"
                     /translation="EMIKFIKCLSHLNMPLKEIEKYTSMLYQNKIDVKTILVAHLEFL
                     NHQRNLISTHIDLIEQELKKETHSK"
     gene            298..1722
                     /locus_tag="PTC28_002240"
     CDS             298..1722
                     /locus_tag="PTC28_002240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HDK5717477.1"
                     /translation="MHLGVILNRVFRINHNPLLDYVITHQDEIKQLYLILPIEDLSDA
                     ATVKREDYHHVVKGFVSTLIKHNIHPYIVDYKNLDTLANALSLSHVLMAKDIMSYHRA
                     SYDYPHMKKRFEKHHISVIGQRVNHYFQPSKTFNQQHQPYQIFTYFYKANRQHLAHTP
                     QKSTQLKQLAQYAAKGMNQSDLKFDKHTDEEACARQSWNHFLNHEITLYSQLADDITR
                     NNISGLSRYLAYGLLDIREVINHLLEGYDSDENSYESFIRELMFREFYYVLMTQYPDA
                     ATQSFSVKYRNMEWSERQSHFEAWKNGETGYPIIDAAMKKLLRTGYMHNRLRMIVSQF
                     LTKHLFMNWTWGEAHFRRYLIDYDNASNVHGWQWSASTGTDAVPYFRMFNPIRQSERF
                     DAMGDFIKEQLQILKDVKPKYIHNPSQYVTAIQQNHQIKIGEDYPKAIINHKESRDYV
                     MQQFKQYTNYKNGNHHENDINIDF"
     gene            complement(2071..4641)
                     /locus_tag="PTC28_002241"
     CDS             complement(2071..4641)
                     /locus_tag="PTC28_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibrinogen-binding adhesin SdrG C-terminal
                     domain-containing protein"
                     /protein_id="HDK5717478.1"
                     /translation="MYKNEKEKHSIRKLSIGAASVIVGGLMYGVLGNDEAQANEDVTE
                     TTGRNSVTTQASEQHLQVEAVPQEGNNVNVSAVKVPTNTATQAQEDVASVSDVKAHAD
                     DALQAQESSHTDGVSSEFKQETAYANPQTAETVKPNSEAAHQSEDEDKQKPVSFSRKE
                     DETMLQQQQVEAKNVVSAEEVSQEENTQVIQSPQDVEQHVGGKDISNEVVVDRSDIKG
                     FNSETTIRPHQGQGGRLNYQLKFPSNVKSGDQFTIKLSDNINTHGVSVERTAPRIMAK
                     NTEGATDVIAEGLVLEDGKTIVYTFKDYVNGKQNLTAELSVSYFVSPEKVLTTGTQTF
                     TTMIGNHSTQSNIDVYYDNSHYVDGRISQVNKKEAKFQQIAYINPNGYLNGRGTIAVN
                     GEVVSGTTKDLMQPTVRVYQYKGQGVPPESITIDPNMWEEISINDTMVRKYDGGYSLN
                     LDTSKNQKYAIYYEGAYDAQAETLLYRTYIQSLNSYYPFSYQKMNGVKFYENSASGSG
                     ELKPKPPEQPKPEPEIQADVVDIIEDSHVIDIGWNTAVGEESGANQGAQEEITENHDI
                     EVIEENNLVEMTEDTALEEESGANQGPQEEITENHDIEVIEENNLVEMTEDTAVGEES
                     GANQGPQEEITENHDIEVIEENNLVEMTEDTAVGEESGANQGPQEEITENHDIEVIEE
                     NNLVEMTEDTAVGEESGANQGPQEEITENHDIEVIEENNLVEMTEDTAVGEESGANQG
                     PQEEVTENQPQQEEIMENQEVEKKGDSNLVESTKTPKAEESVSVQPTLEEKITKNHVN
                     TVVVNTKVSEVKEKDPHHTKALPDTGTTSRSHSMMIPLLLVAGSVVLLRRKKKHSKVN
                     "
BASE COUNT         1345 a          976 c          772 g         1680 t
ORIGIN      
        1 tgaaatgatt aaattcatca aatgcttgag tcatctcaat atgcctttaa aagaaattga
       61 aaaatatacc tccatgctgt atcaaaataa aatagatgtc aaaaccattt tagtggcaca
      121 tttagagttt ttaaatcacc aacgcaacct tatcagcacg cacattgact taatcgagca
      181 agaattgaaa aaagagactc attcaaaata gcatctatat ctctaaaaac cttaaaagac
      241 ataaaaattc acattaacat tagtgcttct agttaaaaag cacaaggagg tcatcatatg
      301 cacttaggcg tcatactaaa cagggttttt agaatcaatc ataaccctct tcttgattat
      361 gtcattacac atcaagacga aataaagcaa ctatatttga tattacctat agaagatttg
      421 agtgatgcgg ctacagtaaa acgcgaggat tatcatcatg tcgtaaaagg gtttgtaagt
      481 accctcatta aacacaatat acacccttat attgttgatt ataaaaattt ggatacatta
      541 gcgaatgcgt tatcactctc tcacgtattg atggccaaag acattatgag ttatcacaga
      601 gcaagttatg actatcctca tatgaaaaaa cggtttgaaa agcatcacat ttcggtcatt
      661 ggtcaacgtg tcaatcacta ctttcagcca tcaaagactt ttaaccagca acaccaacct
      721 tatcaaatat ttacatactt ttataaagcc aatcgccaac atctagctca tacacctcaa
      781 aaaagcacgc aactgaagca attagcacaa tatgctgcca aaggaatgaa ccaaagtgat
      841 ttaaaatttg acaaacacac agatgaagaa gcctgtgcac gtcaatcctg gaatcatttt
      901 ttgaatcatg agattaccct ttattctcaa ttagcagatg atatcactcg aaataatatc
      961 agtggtttaa gcaggtattt agcttatggt ttactcgata ttcgagaagt catcaatcat
     1021 ttacttgaag gatatgacag tgatgaaaat agttatgagt ctttcatcag agaactcatg
     1081 tttcgtgaat tttattatgt attaatgaca cagtacccag atgccgcgac acaatctttt
     1141 tctgtcaagt atcggaatat ggaatggtct gagcgtcagt ctcattttga agcttggaaa
     1201 aatggagaaa ccggttatcc tattatcgat gcagcaatga aaaaactcct tcgtacaggg
     1261 tatatgcata atcgcttacg tatgatagtg tctcaatttt taacaaaaca tctatttatg
     1321 aactggactt ggggagaagc acattttaga cgctatttga tagactacga taatgcttcg
     1381 aatgtacatg gttggcaatg gtctgcatct accggaacag atgccgtccc ttatttcaga
     1441 atgttcaatc ctatacgtca aagtgaacgt tttgatgcaa tgggtgattt tattaaagaa
     1501 cagttacaaa tattgaaaga cgtaaagcct aagtatattc acaatccctc tcaatatgta
     1561 acagcaatac aacaaaatca tcaaataaaa attggggaag attatccaaa agccatcata
     1621 aaccataaag agagtagaga ttatgtgatg caacaattca agcaatatac aaactataag
     1681 aacgggaatc atcatgaaaa tgacattaac attgattttt gacatcgcaa tgatcatctc
     1741 aagcatcttg atggttatct tgttttgctt taaaggattg agtatcgtat ctactgagca
     1801 ctgattcttg ccacggtcat tttttgtagc ttgatttcct tatatatgga gctcaaaaaa
     1861 tggagatcac gtaatgatga gctaccaatc tgacagttaa ttgccctgta tgtactgtta
     1921 aataacagag taaaaaacat ttcaaatcaa tttacagatt atgggtttga cttaagcata
     1981 tttcaaataa aaaatgtagg gaaatggcaa atatattgac cactttccta catttctgtt
     2041 ttcaccatat tacgatttta aaattattct ttaattcacc ttactatgct ttttctttcg
     2101 acgtaacaac actactgacc cagcaacaag aaggagagga atcatcatgg aatgacttcg
     2161 agaggttgtc cccgtatctg gtagtgcttt tgtatggtgg ggatcctttt ctttaacttc
     2221 agataccttc gtattcacta ctactgtgtt aacgtggttc tttgtgattt tttcttctaa
     2281 agttggctga acgctaactg attcttcggc ctttggagtt tttgtacttt ctaccaagtt
     2341 actatcgcct ttcttttcga cttcttggtt ttccatgatt tcttcttgct gaggttgatt
     2401 ctctgttact tcttcttgag ggccttggtt tgctccactc tcttctccaa ctgctgtatc
     2461 ttctgtcatt tccaccaagt tgttttcttc aatgacttcg atgtcgtggt tttccgtaat
     2521 ttcttcttga ggaccttgat ttgctccact ttcttctcca actgctgtat cttctgtcat
     2581 ttccaccaag ttgttttctt caatgacttc tatatcgtga ttttccgtga tttcttcttg
     2641 agggccttgg tttgctccac tttcttctcc aactgctgta tcttctgtca tttccaccaa
     2701 gttgttttct tcaatgactt cgatgtcgtg gttttctgtg atttcttctt gagggccttg
     2761 gtttgctcca ctctcttctc caactgctgt atcttctgtc atttccacca aattgttttc
     2821 ttcaatgact tcgatgtcgt ggttttctgt gatttcttct tgaggacctt ggtttgctcc
     2881 actttcttct tccaacgctg tatcttctgt catttccacc aagttgtttt cttcaatgac
     2941 ttcgatatcg tggttttctg tgatctcttc ttgagcacct tgatttgctc cactttcttc
     3001 tccaactgct gtattccatc ctatatcaat cacatggcta tcttcaataa tatctactac
     3061 atcagcttga atttcaggtt ctggttttgg ttgttcaggt ggtttcggtt tcaactcacc
     3121 gcttccactc gcactatttt cgtaaaactt cacaccgttc attttttggt aactgaacgg
     3181 atagtaactg tttaatgact gtatatatgt tctatacaac agcgtttcag cttgcgcatc
     3241 atatgcccct tcataataga tggcatattt ttgattcttg ctagtatcca gattcaagct
     3301 atagccacca tcatattttc ttaccatagt atcgtttatg ctgatttctt cccacatatt
     3361 agggtctata gtaatacttt caggaggaac accttgtcct ttatattgat atacacgcac
     3421 tgtaggttgc attaagtctt tagtcgtacc actgaccact tcaccattaa ctgcaattgt
     3481 ccccctgcca tttaaatagc cattagggtt aatgtatgct atttgttgaa atttagcttc
     3541 ttttttgttc acttgcgaaa tacgtccatc tacataatga ctattatcat aataaacgtc
     3601 aatattggat tgcgttgaat gattaccgat catcgtcgtg aaagtttgtg tcccagtagt
     3661 caagactttt tccggactta cgaaatagct cactgataac tcagcagtca aattttgctt
     3721 gccatttaca tagtctttaa atgtatatac gattgtttta ccatcttcca acactagacc
     3781 ttcagcaatt acatccgtcg caccttcagt atttttagcc atgattctcg gtgcggttct
     3841 ttctacagaa acaccatgtg tattgatatt gtcagataat tttatagtaa actgatcgcc
     3901 tgattttaca ttactaggaa actttaattg ataattcaac ctgccacctt gtccctgatg
     3961 aggtcgaata gtagtttcgc tgttaaatcc tttgatgtca ctcctatcca ctacaacctc
     4021 attagagata tctttaccac ctacatgttg ttcaacgtct tgaggggatt gtatcacttg
     4081 agtattttct tcttgagaca cttcctccgc actcacaaca tttttggctt caacttgttg
     4141 ttgctgaagc atagtctcat cttctttgcg gctaaatgat acgggttttt gcttatcctc
     4201 gtcttcagac tgatgtgctg cttcactatt aggtttaact gtctcagctg tttgaggatt
     4261 cgcataagct gtctcctgct tgaattctga agaaacacca tcagtatgac tactttcttg
     4321 tgcttgtaat gcatcatcag catgtgcttt aacatcggat acacttgcaa catcttcttg
     4381 tgcttgcgtt gccgtattcg taggtacttt tacagcggat acatttacat tattgccttc
     4441 ttgaggtact gcttccactt gcaaatgttg ctcagaagct tgcgttgtca ctgaatttct
     4501 cccagttgtt tcagtgacat cttcattcgc ttgagcttca tcatttccca aaacaccata
     4561 catgagtccc ccaacaatga cagatgcggc tcctatagat aactttctta ttgaatgctt
     4621 ttctttttca tttttgtaca caattaataa ctccctttct aataactcat aacaatataa
     4681 tacgagaacc tttagttgtc tactattttg tttttcaaaa cttattagaa gattctattt
     4741 atcggaatgt tcagaaagat aaatggttta ttt
//
LOCUS       DANHPA010000142         4698 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.143, whole genome shotgun sequence.
ACCESSION   DANHPA010000142 DANHPA010000000
VERSION     DANHPA010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 4698)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4698)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4698
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.143"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..2703
                     /gene="acnA"
                     /locus_tag="PTC28_002242"
     CDS             <1..2703
                     /gene="acnA"
                     /locus_tag="PTC28_002242"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HDK5717479.1"
                     /translation="ASNLKAQAKKSFQLNGKSLTYYDLNTLEEQGYTQISRLPYSIRV
                     LLESVLRQEDGFVITDEHIKALSSFGKENEKGEVPFKPSRVILQDFTGVPAVVDLASL
                     RKAMDDVGGDLTKINPEVPVDLVIDHSVQVDSYANPESLERNMKLEFERNYERYQFLN
                     WATKAFDNYNAVPPATGIVHQVNLEYLANVVHVREENGEQVAFPDTLVGTDSHTTMIN
                     GLGVLGWGVGGIEAEAGMLGQPSYFPIPEVIGVRLTNELPQGANATDLALRVTELLRK
                     KGVVGKFVEFFGPGVDKLPLADRATIANMAPEYGATCGFFPVDDETLKYLRLTGRSDE
                     HIETVETYLKQNHLFFDVNEEPNYTDVVDLDLSTVEASLSGPKRPQDLIFLSDMKKEF
                     EKSVTAPAGNQGHGLDKAEFDKTATVNFKDGSTTEMTTGDIAIAAITSCTNTSNPYVM
                     LGAGLLAKKAVEKGLEVPSYVKTSLAPGSKVVTGYLRDSGLQSYLDQLGFNLVGYGCT
                     TCIGNSGPLLEEIEKAIADEDLLVTSVLSGNRNFEGRIHPLVKANYLASPPLVVAYAL
                     AGTVDIDLHSEALGQDQQGNDVFLKDIWPSIQEVADAVESVVTPELFKEEYKSVYDNN
                     ELWNQIDTTDQPLYDFDPQSTYIQNPTFFQGLSKEPSAIQPLSNLRVMGKFGDSVTTD
                     HISPAGAIGKDTPAGQYLTANGVSPRDFNSYGSRRGNHEVMVRGTFANIRIKNQLAPG
                     TEGGYTTYWPTGEVMPIFDAAMKYKEDGTGLVVLAGNDYGMGSSRDWAAKGTNLLGVK
                     TVIAQSYERIHRSNLVMMGVLPLQFKEGESADTLGLDGTETIAVDLDENVQPGQTVKV
                     TATKEDGTTVEFDVTARFDSNVEIDYYRHGGILQLVLRRKLASA"
     gene            3066..3530
                     /locus_tag="PTC28_002243"
     CDS             3066..3530
                     /locus_tag="PTC28_002243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDK5717480.1"
                     /translation="MIYALTEIEARYQETDQMGVIYHGNYATWFEVARTDYIRKLGLD
                     YAEMEQAGVVSPVTELNIQYKKSVTYPEKVTIKTWVSRFSRLRSRYQYEIYNAKGELV
                     TTGYTDNVIITKDAGKPVRLDKAFPSWYTVYHDVDQRNQAGEDLEVKNSDID"
     gene            complement(3659..3964)
                     /locus_tag="PTC28_002244"
     CDS             complement(3659..3964)
                     /locus_tag="PTC28_002244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717481.1"
                     /translation="MKIELTDDAVEWFKDELELPEEGKVLQFYVRYGGEFQLKQGFSP
                     AFNVEFESDIDEIGFEETFNDIRIVIAEKDVWYYEDHKLSIDINDDEVIYTAESIEA"
     gene            complement(4047..4628)
                     /gene="plsY"
                     /locus_tag="PTC28_002245"
     CDS             complement(4047..4628)
                     /gene="plsY"
                     /locus_tag="PTC28_002245"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HDK5717482.1"
                     /translation="MVLILLFIVSYLIGSIPSGYLIGKIFFKKDIRKYGSGNMGATNS
                     FRVLGKPAGFAVTFFDIFKGFIVVFLPVLFNVEIHGLLVGIFAILGHVYPIYLKFRGG
                     KAVATSAGVMLAVNPILLLILAAIFFAILKLTKYVSLSSIIAAICCVIGSFFVSDYIM
                     LITSFVVAILLIYRHMSNIKRIIKGTEPKIKWM"
BASE COUNT         1557 a          821 c          939 g         1381 t
ORIGIN      
        1 gcttcaaatt taaaagcaca agcaaaaaag tcattccaat tgaatggtaa gagcttaacg
       61 tattacgatt taaacacttt agaagaacaa ggttatacac aaattagtcg tttaccatac
      121 tcaattcgtg tgttacttga atctgtatta cgtcaagagg atggttttgt tattacagat
      181 gaacacatta aagcactatc atctttcggt aaagaaaatg aaaagggtga agtgccattt
      241 aagccgtcac gtgttatttt gcaagacttt actggcgtgc cagctgtcgt ggacttggct
      301 tcattacgta aagcgatgga cgatgtaggt ggggacttaa ctaaaatcaa tccagaagta
      361 ccagtagact tagttatcga ccactctgta caagtagata gctatgcgaa tcctgaatcg
      421 ttagagcgca acatgaaatt agaatttgaa cgtaactatg agcgttacca atttttaaac
      481 tgggcgacaa aagcgtttga taactataac gctgtaccgc cagcaacagg tatcgttcac
      541 caagttaact tagagtattt agcgaatgtt gtccacgtac gtgaagaaaa tggtgagcaa
      601 gttgcattcc ctgatacatt agtaggtact gactctcata caacgatgat caatggttta
      661 ggtgttctcg gttggggtgt tggtggtatc gaagctgaag ccggtatgct cggtcaacct
      721 tcatatttcc caattccaga agtgattggt gtacgtttga cgaacgaatt acctcaaggt
      781 gcgaatgcaa cagacttagc cttacgtgta actgaattat tacgtaaaaa aggcgttgtt
      841 ggtaagttcg ttgaattctt cggtcctggt gtagacaaat tgccacttgc tgaccgtgcg
      901 acaatcgcaa atatggcgcc tgaatatggt gcaacttgtg gtttcttccc agttgacgat
      961 gaaactttaa aatatttacg tttaacagga cgttctgacg agcacattga aacagtagag
     1021 acatatttaa aacaaaatca cttgttcttt gatgtcaatg aagaaccgaa ctatacagat
     1081 gtggtagatt tagacttatc aactgttgaa gcgtctttat cgggtcctaa acgccctcaa
     1141 gatttaattt tcttaagcga catgaaaaaa gaattcgaaa aatctgtcac tgcaccagca
     1201 ggtaaccaag gtcatggttt agataaggca gaattcgaca aaacagcgac agtgaacttt
     1261 aaagacggct caacaactga aatgacgaca ggtgatattg cgattgctgc gattacatct
     1321 tgtacgaata catcgaaccc atacgtgatg ttaggtgcag gtttgctagc gaaaaaagca
     1381 gttgaaaaag gtttagaggt accatcttat gtgaagacct ctttagcacc tggttcaaaa
     1441 gtcgtaacag gttatttacg tgattcaggc ttacaaagtt acttagatca attaggcttt
     1501 aacttagttg gttatggctg tacaacttgt atcggtaact caggtccatt attagaagaa
     1561 attgaaaaag cgattgctga cgaagattta cttgtgactt ctgtattatc aggtaaccgt
     1621 aacttcgaag gtcgtatcca tccattagtg aaagcaaact atcttgcgtc accaccactt
     1681 gttgttgcgt atgcattggc aggtactgta gatatcgatc ttcatagcga agcattaggt
     1741 caagatcaac aaggcaatga tgtgttctta aaagatattt ggccatcaat tcaagaagtt
     1801 gcagatgcag tggaaagcgt tgtaacaccc gaactcttta aagaagaata taagagcgtt
     1861 tatgacaaca acgaattatg gaaccaaatc gatacaactg atcaaccatt gtatgacttt
     1921 gatccacaat caacatacat tcaaaatcct acattcttcc aaggtttatc aaaagaacct
     1981 agcgcaatcc aacctttatc taacttgcgt gtgatgggta aatttggtga ctcagtgaca
     2041 acggaccata tttctccagc gggtgcgatt ggtaaagata cgccagcagg tcaatattta
     2101 acagcgaatg gtgtatcgcc acgtgatttc aactcttatg gttcacgtcg tggtaaccat
     2161 gaagtgatgg tacgtggtac atttgcgaat atccgtatta aaaaccaact tgcgcctggt
     2221 acagaaggtg gttatacaac ttactggcca actggtgagg tcatgcctat tttcgatgct
     2281 gcaatgaaat ataaagaaga cggtactggt ttagttgtat tagcaggtaa cgactatggg
     2341 atgggatctt ctcgtgactg ggcagctaaa ggtacaaatc ttttaggcgt gaaaacagta
     2401 attgcacaaa gttacgaacg tattcaccgt tcaaacttag taatgatggg tgtattacct
     2461 ttacaattta aagaaggcga atctgcggat acattaggat tagatggaac agaaacaatc
     2521 gcggttgatc tcgatgaaaa tgtgcaacca ggtcaaacag ttaaagtgac agcgacgaaa
     2581 gaagacggta caacagttga attcgatgta actgcacgtt tcgattcaaa tgttgagatt
     2641 gattactatc gtcatggtgg tattttacaa cttgtattac gtaggaagtt agcttcagcg
     2701 taatggcata attgaggctt ttaatgatag gggataaggt catcattggc gcttatccct
     2761 ttttattatg aattttagta acgtatcgtc atggtgctgt gtgatgagaa aatgcgagtc
     2821 atcgaccagt tgaacatgta aggcgaatca cttcattata attatattat gtcaacttaa
     2881 atattctaaa cgatttttaa actcaacgtt aaggggtcca cactgtatca aattgatcaa
     2941 aatatgcgat aatgtcatag agatgaatga agttaaagtt taaaattgtg agacagcgct
     3001 gatttgaatc gattatgact tttcaaatgt agcaagtttc tcttatatag aaagaaggta
     3061 aaagaatgat ttatgcatta acggaaattg aagcaagata ccaagaaacg gatcaaatgg
     3121 gtgtgattta tcacgggaat tatgcgactt ggtttgaggt ggcacgtaca gactacatac
     3181 gcaagctggg tctagactat gcagaaatgg aacaagcagg cgttgtgtcg ccagtaactg
     3241 aactcaacat tcaatataaa aaaagtgtga cataccctga aaaagtgaca attaaaacgt
     3301 gggtttctcg attttcgcgc ttacgttctc gttatcaata tgaaatctat aatgcaaaag
     3361 gtgagctggt tacaacggga tatacagata atgtaatcat tacaaaagat gcaggaaaac
     3421 ctgttcgttt agataaagca tttccgagtt ggtatacagt atatcatgat gtggaccaac
     3481 gtaatcaagc tggtgaagat ttagaagtga aaaactcgga catagactaa taaaataggt
     3541 gtgctgaata cagtgtttaa tagtgtatga ataaaaatat aaaaaagtgt cggctagaaa
     3601 tctctataaa taaaaaaaga ttcctggtcg acaccttttt acatttgacg tcacataatt
     3661 atgcttcgat ggattcagct gtgtagataa cttcatcgtc gttaatgtcg atggaaagct
     3721 tgtgatcttc atagtaccaa acgtcttttt ccgcaatcac aatacgaatg tcattaaatg
     3781 tttcttcaaa gccaatttca tcaatatcac tttcaaattc tacattaaaa gcggggctaa
     3841 atccttgttt gagttggaat tcgccgccat aacgcacata gaattgtaat acttttcctt
     3901 cttcaggtaa ttctaattcg tctttgaacc attcaacagc gtcatctgta agttcaattt
     3961 tcacgtaaaa aacccctttc aatattaagg ttaatgtaat tcaaccttat tgtaaggggt
     4021 tttcaatgaa atttaaaact ttatgattac atccatttaa ttttcggttc tgtgccttta
     4081 ataatgcgtt taatattgct catatgtcga taaatcaata atatcgccac tacaaagctt
     4141 gtgattagca taatgtaatc actcacaaag aaagagccaa taacacaaca aatagccgca
     4201 ataatacttg ataaagaaac gtattttgtt aatttcaaaa tagcgaaaaa gatagctgca
     4261 agaataagta acaaaatcgg attgacagca agcatcacgc cagcacttgt tgcaacagct
     4321 tttccaccac ggaattttaa gtaaatcgga taaacgtgtc ctagaattgc aaaaattccc
     4381 acgagtaaac cgtgtatttc tacgttgaaa agtacaggta aaaatacaac gataaagcct
     4441 ttgaatatat caaaaaatgt gactgcaaaa ccagctggct tcccaagtac acgaaaacta
     4501 tttgtggctc ccatattacc actaccatat tttctaatat cttttttgaa gaaaatctta
     4561 ccaattaaat agccacttgg tatggaacca attaaatagc taacgatgaa tagtaggatt
     4621 aacaccatga ttcttcacat ccttttagta cctactccta ttttaacata atttaagaga
     4681 agatgaggta tttttata
//
LOCUS       DANHPA010000143         4635 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.144, whole genome shotgun sequence.
ACCESSION   DANHPA010000143 DANHPA010000000
VERSION     DANHPA010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 4635)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4635)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4635
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.144"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            84..896
                     /gene="panB"
                     /locus_tag="PTC28_002246"
     CDS             84..896
                     /gene="panB"
                     /locus_tag="PTC28_002246"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HDK5717483.1"
                     /translation="MKTLNHIQQMKRDGEKISMVTAYDYPSAKQVEAANIDMILVGDS
                     LGMTVLGYDSTVDVTLEDMLHHSRAVRRGAPDTFVVVDMPFGSVGIDAKTDIENAIRL
                     YRESRGNALKVEGAHLTDFMTQATQMGIPIVAHLGLTPQSVGVLGYKMQGTTKEAAQQ
                     LIEDAQAVERAGAIALVLEAIPSDLAQVISEKLTIPVIGIGAGKGTDGQVLVYHDMLN
                     YGVDRHAKFVKQYCDLSIGIAALEKYNEEVKTGVFPSEAYTYKKQIMDEVDA"
     gene            893..1753
                     /locus_tag="PTC28_002247"
     CDS             893..1753
                     /locus_tag="PTC28_002247"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HDK5717484.1"
                     /translation="MTQRITSIQEMQQLARQFHREGKSIGFVPTMGALHDGHLTMMRQ
                     STEDNDITVISVFVNPLQFGPNEDFDAYPRQINEDEAMVSQIDVDYVFYPSVEEMYPG
                     EIGTHVTVGRLAKVLEGALRPGHFDGVVTVVNKLFNIVQPDVAYFGKKDAQQLAIVEQ
                     MVRDFNHPVKIVGVDIVREADGLAKSSRNVYLTVEERQEAVHLRQSLALAQSLYDAGE
                     RESSVIINKVTQYLQTHTSGQVQEVAVYSYPELREQAHIEGRIFISLAVKFTQARLID
                     NIIIGDETEK"
     gene            1750..2133
                     /locus_tag="PTC28_002248"
     CDS             1750..2133
                     /locus_tag="PTC28_002248"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015901315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HDK5717485.1"
                     /translation="MIRTMMNAKIHRARVTEANLNYVGSITIDQDILEAVDILPNEKV
                     AIVNNNNGARLETYVIAGERGSGKICLNGAAARLVQVGDVVIIMTYAQLDETELHSHS
                     PKVAVMNEHNEIVEMIQEKEDTVIL"
     gene            complement(2250..2954)
                     /locus_tag="PTC28_002249"
     CDS             complement(2250..2954)
                     /locus_tag="PTC28_002249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exotoxin"
                     /protein_id="HDK5717486.1"
                     /translation="MKQSTILKVSLAVGILTTGVGIHSQAAAFASEAHAQNVHSEAQQ
                     LKDYYSKTYFEYNDVTGYVEDNNKLSVVTPQETLVSVSLVGKDLSKYTDKANGYNHLD
                     LFVVPEGTDRSAETKSIGGITRTNQATYHDYVKRPNIVINRTSGIVTSSMSTNDFSIN
                     KEEVSLKELDFKLRQKLINEYGLYQNGSSNGKIVIKIGDNDKDIMTLELNKKLQEHRM
                     SDTVDVNKIQQITIDL"
     gene            complement(3148..4635)
                     /locus_tag="PTC28_002250"
     CDS             complement(3148..4635)
                     /locus_tag="PTC28_002250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coagulase"
                     /protein_id="HDK5717487.1"
                     /translation="MLVLSASAVLASHFLVGGEASAIVSGEKNPYTSKALSIMEKSST
                     SSVTTEQYKKSLEKLMARLTIGGYEKYDEPEYADVVKKYKQRFMAEMNAMNQFLQEEK
                     AKEKKNGAISTDAIGLTHQRYDTVYKSLEENKKDFEREIKKLNEQHSDLKTFNRQEQN
                     DADQKLNDLENQALMLGQTFIYQGDAIFNLYNKLDMSIGNLDYEREEKKAINKRMLDK
                     KVEDLETIIDEFFEEIGLARPKEIPVLTRENEKDSAVKAKLRQDAQDAKNDASLRHPR
                     VLKQQSTDAPSQPSDQEVAQPSVNSIEIKAPQAATPQQPVHTETIVHTPMTAVPQTKH
                     EATFEVPQGRNTQTSATANSEQATETVDVPKANGQVQSEQVTTPGVQQTHSMAQQSET
                     PQPVAEETEIITENHVVDIDESTTFQKSGYLYGVSESDTSGYTEREKRAIRRNHVREA
                     EALVNQYVETHRYQDRMAAQQKVNTLSKAHQKRFNKMINKAYNGQ"
BASE COUNT         1324 a          825 c          923 g         1563 t
ORIGIN      
        1 gttctgcaaa aataaaaaaa tcaatggaaa attcaagtga cttgatttac tattgatata
       61 ataaaaatta aagggtgaaa gaattgaaaa ctttaaatca tattcagcaa atgaagcgtg
      121 acggtgaaaa aatttcaatg gtgaccgctt atgattaccc aagtgcgaaa caagttgaag
      181 cggctaatat cgatatgatt ctagtgggag actcactagg tatgacggta ttaggctatg
      241 acagcacagt cgatgtgaca cttgaagata tgttgcatca tagccgtgct gttcgtcgtg
      301 gtgccccaga cacgtttgtg gttgtcgata tgccatttgg ttcagtaggt atcgatgcta
      361 aaacagatat tgaaaatgcg attcgtcttt atagagaaag tcgtggaaat gctttaaaag
      421 tagaaggtgc acatttgact gactttatga cacaagcaac acaaatgggg attccgattg
      481 ttgcacatct cggtttgaca cctcaaagtg ttggcgtatt aggttataag atgcaaggta
      541 caacgaaaga agcggcacaa caactgattg aagatgctca ggcagttgaa cgtgcaggtg
      601 cgattgcatt agtgcttgaa gcgattccga gtgatctcgc ccaagtcatt tcagaaaaat
      661 taacaattcc agtgattggt atcggcgcag gtaaaggaac agatggccaa gtgttggttt
      721 atcacgatat gctcaattat ggcgtggatc gtcatgcgaa attcgtgaaa cagtactgtg
      781 acctctcaat cggtatcgct gcgttagaaa aatataatga agaagtgaaa acaggtgtat
      841 ttccatctga agcatacact tataaaaagc aaattatgga tgaggtagac gcatgacaca
      901 acgtataaca tcaattcaag aaatgcaaca actcgcaaga caatttcatc gtgaaggcaa
      961 gtcaatcggt tttgtaccga caatgggagc gttacatgat ggtcatttaa cgatgatgcg
     1021 tcaatcaaca gaggacaatg acatcaccgt catcagtgtc tttgttaacc cattacaatt
     1081 cggtccaaat gaagattttg atgcctatcc tcgtcaaatt aatgaagatg aggcgatggt
     1141 cagtcaaatc gatgtggatt acgtctttta tccctcagta gaagaaatgt acccaggtga
     1201 aatcggcact catgtaacag tggggcgttt agcaaaagta ttagaaggtg cgctacgtcc
     1261 aggccatttt gatggtgttg tgacagtagt caataagttg ttcaacattg ttcaacctga
     1321 tgtcgcatac ttcggtaaaa aagacgccca acaactcgca attgtcgaac aaatggtccg
     1381 cgattttaac caccccgtta aaattgtcgg tgtcgatatt gtgcgtgaag cggatggatt
     1441 agcgaaaagt tcaagaaatg tttatttaac agtggaagaa cgacaagaag ctgtccattt
     1501 acgtcaaagt ttagcactcg cacagtcgtt gtatgatgcg ggtgagcgcg aaagtagcgt
     1561 cattattaat aaagtgacac aatatttaca gactcataca agtggtcaag ttcaagaagt
     1621 tgccgtatac agttatcccg aattaagaga gcaagcacac atagaaggac gtatttttat
     1681 atcattagcc gtgaagttta cccaagcacg gttaatcgat aacattatta ttggagatga
     1741 aacagaaaaa tgataagaac tatgatgaac gcaaaaattc atcgtgcacg tgtcacagaa
     1801 gccaatttga actatgtcgg tagtattaca atcgatcaag acattttaga ggcagttgat
     1861 attttgccaa acgaaaaagt cgcgatcgtc aacaataata acggtgcacg tttagaaaca
     1921 tacgtcattg ccggtgaacg cggcagtggt aaaatttgtt taaacggtgc agccgcgcgt
     1981 ctcgtacaag tgggcgatgt ggtcattatt atgacatatg cgcagttaga tgagacggag
     2041 ttacattcac attctcctaa agtagcagtc atgaatgaac ataatgaaat tgtggaaatg
     2101 attcaagaaa aagaagatac ggtgattctt taaatataca gtaaggtagg ctaggataac
     2161 gttattccta gcctgttttt atgaatgata ctaaaaaaaa gaggcacccg tataggatga
     2221 cctcatttat ctatatcaaa tagaactttt tacagatcta tcgtaatttg ttggatttta
     2281 ttgacatcca ccgtgtcgct catacggtgt tcttgtaact ttttatttaa ctctaaagtc
     2341 atgatgtctt tatcattatc cccaattttg atgacaattt ttccattact tgaaccgttt
     2401 tggtataaac catattcatt aatcagtttt tgacgaagtt taaagtctaa ttcttttaaa
     2461 gacacttctt ctttgttaat cgaaaagtca tttgtgctca tgcttgaagt gactatacca
     2521 ctcgttctat taatcacgat attaggtctt ttcacgtaat cgtggtatgt cgcttggttc
     2581 gtacgagtaa tgccaccaat agatttcgtt tcggcgcttc tatctgttcc ctcaggcacc
     2641 acaaaaagat ctaaatggtt atacccgttt gctttatctg tatattttga taagtccttt
     2701 cctactaatg aaacggacac taatgtttcc tgaggtgtta cgacacttaa cttgttatta
     2761 tcttctacat aaccagtcac gtcgttgtat tcaaaataag ttttagagta ataatcttta
     2821 agttgttgcg cttcagagtg aacattttgg gcatgtgctt cgctagcgaa tgcggctgcc
     2881 tgactgtgta tccccacacc tgttgttaaa atacctactg ctaaacttac ttttagaata
     2941 gttgattgct tcatgatgat ttttctcctt aatatgttgt catctattgt ttgtcattga
     3001 agacttttta attatataga gatactaggg attttaatat taactaattt ttaaatgatt
     3061 attaattaat gtcacggaaa tttaataagt aaaaccctta ttttaagtta caacttaaaa
     3121 taagggtttt cttgattact tgatatttta ttgaccgttg taagctttat taatcatttt
     3181 gttaaagcgt ttttggtgtg ctttgcttaa tgtgttgact ttttgttgag ccgccattcg
     3241 gtcttggtaa cgatgtgtct caacgtactg gtttactaat gcttctgcct ctctcacatg
     3301 gttacgtcga atggcgcgct tttctctttc tgtgtagcca gatgtatcac tttcgcttac
     3361 accatacaaa tagcctgact tttggaaagt agtagattca tcaatatcaa cgacgtgatt
     3421 ttctgtgatt atttcagttt cttctgctac tggctgaggt gtctctgatt gttgtgccat
     3481 tgaatgtgtt tgttgtactc caggtgtcgt gacttgttca gattgtactt gtccatttgc
     3541 cttaggtacg tcgactgttt cagttgcttg ttcactgtta gcagtagctg atgtttgtgt
     3601 gttacgccct tgaggtactt cgaatgtagc ctcatgcttc gtttgtggta cagcagtcat
     3661 tggtgtgtgt acgattgttt cagtatgcac aggttgttgt ggtgttgcag cttgtggtgc
     3721 tttgatttcg atgctattaa ctgatggttg cgcaacttct tggtcactcg gttgagatgg
     3781 tgcgtcagta ctttgttgtt ttaacactct agggtgtctc aaacttgcgt catttttagc
     3841 atcttgtgca tcttgtctaa gttttgcttt cactgcacta tctttttcat tttcccttgt
     3901 caaaacaggg atttctttag gacgtgctaa accaatttct tcaaaaaatt catcaataat
     3961 cgtttctaaa tcttccactt ttttatctaa catacgtttg ttaatagctt tcttctcttc
     4021 gcgctcataa tctaagttac cgatgctcat atcgagttta ttatacaagt tgaatatcgc
     4081 atcaccttgg taaataaatg tttgacctaa cattaacgct tggttttcta gatcatttaa
     4141 tttttgatct gcgtcatttt gttcttgtcg attaaaggtt tttaaatcag agtgttgttc
     4201 attcagtttt ttgatttctc tttcaaaatc ttttttgttt tcttctaagg atttataaac
     4261 tgtatcatat ctttggtgtg ttaatcctat ggcatcagtt gaaatagctc cgttcttttt
     4321 ctcttttgct ttttcctctt gtaaaaattg gttcatggca ttcatttcag ccataaaacg
     4381 ttgcttatat tttttaacga catcggcata ttctggctca tcatattttt cataaccacc
     4441 aattgttagt cgagccatta atttttctaa gctcttttta tattgttctg tagtgactga
     4501 tgacgtacta ctcttctcca taatcgataa agctttagat gtataaggat ttttctcccc
     4561 tgaaacaatg gcagacgctt ctcctccaac taaaaagtgt gaagcaagca cagcacttgc
     4621 ggataaaaca agcaa
//
LOCUS       DANHPA010000144         4634 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.145, whole genome shotgun sequence.
ACCESSION   DANHPA010000144 DANHPA010000000
VERSION     DANHPA010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 4634)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4634)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4634
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.145"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(396..2039)
                     /locus_tag="PTC28_002251"
     CDS             complement(396..2039)
                     /locus_tag="PTC28_002251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011303449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HDK5717488.1"
                     /translation="MKAQWMSKLDESLVREFYEGQTEEERQAGFEDVLTFGTAGIRST
                     FGIGPGRLNKFTVRKVALGLAQYLNAKQSDATVVIHFDTRFLSEDFGDEIARVLATKG
                     VKVVLADSYKSTPELSFAVRHLQATAGVMITASHNPSNYNGIKIYGPDGGQLLPDASE
                     DLSQYINAIESPLEIEANDFEALRDAGMILPLADEVTEAYKAGVKALVEAIESQGEKV
                     VLTSLHGTSLPLGATLLTELGFEDFVIETTQSQPDGRFPTVKSANPEEEAAFEYGIRL
                     AEQEDASLIIATDPDADRFGFVERYQDGTTRYFDGNEIGLILMKLRYQELQPTGDAFY
                     IIKSIVTGALSEALAKALNIEVVNVLTGFKYISEQLQQRQTDDAQLVLAFEESHGYLA
                     KDLSRDKDAIQFIPLLVKYKQMLAQNGLTFKEVLNDIYQQIGRYDNLTLSPTYAGHAG
                     RQKIEALMAQFRGDTSDQLLGLNVVTKEDYLTQQTTNLKTGKTTAISLPKADVIRYTF
                     EEGFIALRPSGTEPKIKVYFSLNVPDFNEVVEQFKQKYL"
     gene            2271..3449
                     /locus_tag="PTC28_002252"
     CDS             2271..3449
                     /locus_tag="PTC28_002252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HDK5717489.1"
                     /translation="MNKGLKFLLYLLALMLIIVPTIFALTLFNSSKNAFDDSFSQSDQ
                     RQSQLRDSKVNAAKQPISILFLGIDDSSTRRQNGQSAENARTDAMILSTMNPDKHQIR
                     LVSIPRDTLSYIPEVGYYDKITHAHAYGGPEASMRTVEANLNVPVDYYVRINMEAFAK
                     TVDELGGIEYDVPYDLNEPNTMDKGRIKLKKGKQQLNGDEVLAVTRTRKQDSDLKRGQ
                     RQMEVLKILFKKAQDTKSLHKLDDIIEIVGKNSKHNLSYSEIKALATNYLANDVDIQS
                     QQLKGENELLNGIYYINPDVDNLIETSNTLRKDLGLAPFKDRNQFLVERVKAYYGEIP
                     PLTYLEESLLQNVKKLLPKDENNDQNNKGESADNTNGAMHNQQQGVPYQNQNPDGSYY
                     "
     gene            3464..3934
                     /locus_tag="PTC28_002253"
     CDS             3464..3934
                     /locus_tag="PTC28_002253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000088431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2538 family protein"
                     /protein_id="HDK5717490.1"
                     /translation="MARHTQEKIRHINGIFNMLEQQIIHSKDMAHFRQELFYVNHTHR
                     ENYEALLLYYQESETNPVINAACYIVALPEIFDAIDVFESPLPFSWVYDENGLTPAMQ
                     NLSVPIQYLVAAALEVTDVNIFKPSGYTMGMNNWNLVQMRLFWQYTALVRQQAM"
     gene            4129..4557
                     /locus_tag="PTC28_002254"
     CDS             4129..4557
                     /locus_tag="PTC28_002254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDK5717491.1"
                     /translation="MIKTVETEQEYQDVLVVRETVFIDEQGVSRDEEIDEHEHTAQYI
                     IAYNDDQQPIATARFRHVEGSAKVERVAVLKSARGLGIGKQLMQYLEQVAYEQGHRHF
                     KLGAQTHAIPFYESLGYHTYGEEFLDAGIPHYHMEKHLTS"
BASE COUNT         1493 a          924 c          788 g         1429 t
ORIGIN      
        1 tttaaaataa actgtataga aatgacaaat taaatgaaaa acactcttat tgcattcagc
       61 cgaattacaa aagagtgctt ttagtagtca atgctcattt caactaaacc gtttttataa
      121 aatgagtcat ttccctattc acaattattc aattgttaga aatctttatc tgccatgatg
      181 catatgttat ttaaaagaaa acgccaaata tttcagtgcc tggtttataa ttgttttgat
      241 cgtcactata agcattaaaa aagagcgata tggaagtcaa tacatttctt tagacttccg
      301 tatcgctctt tcaataattt aacgttccca aaaacaatta aaaatagttc attcaacagc
      361 attctattgc gtcaaagata cgttcgatgc tcgagttata aatatttttg tttaaattgt
      421 tctactactt cgttaaaatc aggtacattt aatgagaaat acactttaat tttcggttca
      481 gttccagaag gtcttaacgc aataaaacct tcttcaaatg tatatcggat gacatcagct
      541 ttcggtaatg agatggctgt agtcttacct gtttttaaat ttgttgtttg ttgcgtgaga
      601 taatcttctt ttgttactac atttaagccg agcaattgat cactcgtatc acctctaaat
      661 tgtgccatga gtgcttcgat tttttgtctt cccgcatgac ctgcataagt tggagataac
      721 gtgagattat catatcggcc aatttgttgg tatatgtcgt tcaacacttc tttaaacgtc
      781 aaaccatttt gagccaacat ttgcttatat ttcactaata atggaataaa ttgaatggcg
      841 tctttatcgc gtgacaagtc ttttgctaaa taaccatggc tttcttcaaa tgcgagtacc
      901 aactgggcat catctgtttg acgttgttgt aattgttcgg aaatgtattt gaagccggtc
      961 aacacattaa ctacctcaat atttaacgct ttggctaatg cttcacttaa agcacctgtc
     1021 acaattgatt taatgatata aaacgcatca ccagtcggtt ggagttcttg atagcgcagt
     1081 ttcattaaaa ttaagccgat ttcattccca tcaaaataac gtgtcgtacc gtcttgatat
     1141 ctttctacaa aaccaaatcg atctgcatct ggatcagtcg caatgattaa tgatgcgtct
     1201 tcttgttcag caagacgaat accatattca aatgccgctt cctcttctgg attcgcactt
     1261 ttaactgtcg ggaatcgtcc gtctggttgt gattgtgttg tttcaatgac aaaatcttca
     1321 aagccgagct ctgttaataa tgtcgcacct aatggtaggc ttgtgccgtg aagacttgtt
     1381 aaaacgactt tttcgccttg tgattcgatt gcctctacta atgctttaac gcccgcttta
     1441 tacgcttcag tgacttcatc cgctaatggt aaaatcatgc cggcatcacg taaagcttca
     1501 aaatcattcg cttcaatttc taatggtgat tcaatcgcat taatatattg gcttaaatct
     1561 tctgaagcat ctggcaacaa ttgcccccca tctggaccat aaattttaat gccattgtaa
     1621 ttacttgggt tatggctcgc tgtaatcatc acacctgctg tcgcttgtaa atgacgcacc
     1681 gcaaaagaca gctccggtgt tgatttataa ctgtcagcca gtactacttt aacaccttta
     1741 gtcgctaata cacgcgcaat ttcgtcgcca aagtcttccg ataaaaagcg tgtatcaaaa
     1801 tgaatgacca ccgtcgcatc tgattgtttc gcgtttaaat attgtgcgag accgagcgca
     1861 actttacgca ctgtaaattt atttaaacgt ccaggtccaa tgccaaaagt gcttcgaatt
     1921 cctgcagtcc caaacgtaag tacatcttca aagcctgctt gtcgttcttc ttcggtttgg
     1981 ccttcataaa attcgcgtac taaactttca tctagttttg acatccattg tgctttcaaa
     2041 acatccacca tcctcatatg attcattgat aaaaattaac gggacgccaa cgtgattgat
     2101 atccctcatt cataataata acttcattat acatgaacga cacgcttcca acatagaatt
     2161 cgactaacca atacaaaata gatgaaaatg tatgaaatga ttgaaaagtc atcaacactt
     2221 cattacaata tataatcata tgtaaaaata cctgttagga gcaattcact atgaataaag
     2281 gacttaaatt tttactctat ttattagctt taatgcttat aattgttcct acaattttcg
     2341 cactcactct ttttaattca tcaaagaatg cttttgacga ctcgttctca caatcggatc
     2401 aacgacaatc ccaattaaga gattcaaaag tcaatgctgc caaacaacct atctctattt
     2461 tatttctagg catagatgat agcagtacaa gaagacaaaa cggacaaagc gctgaaaatg
     2521 cacgtaccga tgcgatgatt ttatcaacga tgaatcctga caaacatcaa attcgtttgg
     2581 tcagtattcc tcgtgacacg ttaagttaca ttccagaggt cggttactac gataagatta
     2641 cgcacgcgca tgcatacggt ggaccagaag cttcaatgcg taccgtagaa gcaaatttaa
     2701 atgtccctgt tgattactat gttcgcatta atatggaagc ttttgccaaa actgtagacg
     2761 aacttggcgg tattgaatat gatgtcccat acgatctgaa cgaaccgaat acaatggaca
     2821 aaggtcgtat caaactaaaa aaaggaaagc aacaacttaa tggtgatgaa gtgcttgctg
     2881 tgacacgtac gcgtaagcaa gactctgatt taaaacgcgg gcaacgacaa atggaagtat
     2941 taaaaatatt gttcaaaaaa gcccaagaca ctaaatcttt acacaaatta gatgatatca
     3001 ttgaaattgt agggaaaaat tcaaaacaca acttaagtta ctcagaaatc aaagcactcg
     3061 cgacaaatta cttagcaaat gatgtagaca ttcaatcaca acaacttaaa ggtgaaaatg
     3121 aattactgaa tggtatttat tacattaatc ctgacgttga taatttaatt gaaacgtcta
     3181 acactttacg taaagactta ggtttagcac cttttaaaga cagaaaccaa tttttagtgg
     3241 agcgagtgaa agcatactat ggagaaattc caccactcac atatttagaa gaatcattgt
     3301 tacagaacgt taaaaagctc ttgccaaaag atgagaacaa tgatcaaaac aataaaggtg
     3361 aatcagctga taacacaaat ggcgcaatgc ataatcagca acaaggagta ccgtatcaaa
     3421 accaaaatcc tgatggttca tactactaat aggaggttca cacatggcac gtcatacaca
     3481 agaaaaaatt agacatatca atggcatttt taatatgctc gagcaacaaa ttattcacag
     3541 taaagacatg gcgcattttc gtcaagagtt gttctatgta aatcatacac atcgtgaaaa
     3601 ttatgaagcg ctattgcttt attatcagga aagtgaaacg aaccctgtca tcaatgccgc
     3661 atgttatatc gtcgcccttc ctgaaatttt tgatgcgatt gatgtctttg aatcgccatt
     3721 accgttttct tgggtttatg atgagaatgg tttaacaccc gcaatgcaaa atttaagcgt
     3781 gccgattcaa tatcttgtcg ctgcggcatt agaagtgaca gatgtgaata ttttcaaacc
     3841 ttctggctat actatgggta tgaacaactg gaatctcgta caaatgcgtc tcttctggca
     3901 atatactgcc cttgtacgcc aacaagcgat gtaacaccgt caaatacgaa ttaatgataa
     3961 gtatccgtca tttttacaat gagggtactt ttttatatca ttacaaatag tcctcaacgc
     4021 gtatcatctg tcgcgctgtt atttcaattt taaaaatact tttattctac agctcaatcg
     4081 attatgataa acattaaact cacgctcttt atgaaaggaa tgtggcctat gattaaaaca
     4141 gtagaaacgg aacaagaata tcaagatgtc ctggtcgttc gtgaaacagt atttatcgac
     4201 gaacaaggtg tctctcgtga tgaagaaatt gatgaacatg aacataccgc acaatatatc
     4261 atcgcctata acgacgacca acagcctatc gcaacagcgc gttttcgtca tgtagaaggc
     4321 agtgctaaag ttgaacgtgt cgccgtgtta aaaagtgctc gtggcttagg tattggcaaa
     4381 caactcatgc aatatcttga gcaagtcgca tatgaacaag gccaccgtca ttttaagtta
     4441 ggtgcccaaa cgcacgcgat ccctttttat gaatcattag gctatcatac gtacggcgaa
     4501 gaatttttag atgcaggtat ccctcactat catatggaaa agcacctcac ttcatagact
     4561 tttcccactt cattcatatt aatgattcga attgagatat gtcctaactt aggcgatttc
     4621 aattcgatca ttta
//
LOCUS       DANHPA010000145         4490 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.146, whole genome shotgun sequence.
ACCESSION   DANHPA010000145 DANHPA010000000
VERSION     DANHPA010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 4490)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4490)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4490
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.146"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            216..875
                     /locus_tag="PTC28_002255"
     CDS             216..875
                     /locus_tag="PTC28_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HDK5717492.1"
                     /translation="MKKTILVLGLGLLATFFVSNESYAAETIQNNTSSSETNQNSDQT
                     PLDHYIRKADGTLVEPNVYPHKDYVENEGPLPEFKFQVDSKKDSSDPNQAPLDHYIRK
                     ADGTLVEPNVYPHKDYVENEGPLPEFKFMYADKQNHHDQQSKNNKDKQRANYSDKKHN
                     DQPGHPKAVTPAVQHDKAVTSNATVKALPNTGESDKTTQLPIVLSLLSVGILVLLKLR
                     K"
     gene            1149..2114
                     /locus_tag="PTC28_002256"
     CDS             1149..2114
                     /locus_tag="PTC28_002256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein CoiA"
                     /protein_id="HDK5717493.1"
                     /translation="MLTAYNVQSQQILATHARKEEVYHCPICKEVLILRQGVRKGAHF
                     AHYRHSMGHVHLKGESVQHARCKAALYEQLCKIDPATQLEPYIKKITQIPDMIFRAWA
                     IEVQLSSIAIKTMRERTEGLLSEGYRVLWLAKKPQMKKGLYVLSQLQQQCIIPSTKTL
                     YCIDTTSCELFRLSHMIPITAKTFHGELTPLSIQAFSQALQQDPQYDVIIRKLSTSQI
                     LKYIQQCRRQNNVLEPTLSLMYQMRMLDEQVVKVTGFLFPEQIYIHTHPVLWQLYILK
                     CLQAGIPSHSLLLKQLKFRHFAVEECDRQQIINRIVQRYLKLLNL"
     gene            2188..3996
                     /gene="pepF"
                     /locus_tag="PTC28_002257"
     CDS             2188..3996
                     /gene="pepF"
                     /locus_tag="PTC28_002257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoendopeptidase F"
                     /protein_id="HDK5717494.1"
                     /translation="MSQQLTREQQEQKYPEYSWDLTTIFESDESWEAAFKTVESYLGK
                     EEQFKGHLGDDAETLYQALSLEDEIETELESVYVYAHLKQDQDTANDKYTGFEARAHQ
                     LAIKLSSAWSFLVPELLQIDEKTIESYVAEHEGLKRFEFDLNLINQKRPHVLDAEKEK
                     LLTEAQDALSTPSNVFSMFDNADLTFDDVTDKDGEKHALTQGSFIKYLESDDRLLRQS
                     AYENMYKAYGSYNNTLAATLAGEVKKHVFNARSHNYKSARAQALGNNHIPEAVYDNLV
                     KTVHEYLPLLHRYTKLRKELLGVDDLKMYDMYTPMVKDIKFEMPYDEAVEWMLKGLEP
                     MGEEYLNVIKEGLNNRWVDVYENKGKRSGAYSSGSHKTNPFILLNWSDTVSDLYTLVH
                     EFGHSAHSYFSRKNQPSNMSGYSIFVAEVASTCNEALLSHYMEQNLDDKRRLLLLNQE
                     LERFRATLFRQTMFAEFEHKIHQIEEAGEPLTATRMNEEYAALNRQYFGDTVETDESI
                     SKEWSRIPHFYMNYYVYQYATGYSAAQSLSHQILTEGAPAVERYINEFLKKGSSNYPI
                     EILKNAGVDMTTPGPIEDACKVFEQKLDAFEKLMKA"
BASE COUNT         1582 a          750 c          869 g         1289 t
ORIGIN      
        1 taattactaa gaagaaatat gatttatgga atagttttta tttcgattca aaaaaaggga
       61 aaagtgatgc atatgttaac aaaccggtta ttgctaaata tatttacaca ttaggaaacg
      121 gtagacaata ttattcttta tactcaatta aaagtgataa atggttaggc tatgttaatg
      181 ttaatgctac aaaatagaaa atggaggtct ttttaatgaa gaaaacaatt ttagtacttg
      241 gtctagggct attagcaaca ttttttgtaa gtaacgaatc atatgccgca gaaacgattc
      301 aaaacaatac gtcatcaagt gaaacgaatc aaaattcaga tcagacgccg ttagatcatt
      361 atattcgaaa agcagatggc acactggttg aaccgaacgt gtacccacat aaagattatg
      421 tagagaatga aggaccttta ccagagttta aatttcaagt tgactctaag aaagattcat
      481 ctgatccaaa tcaagcaccg ttagatcatt atattcgaaa agcggatggc acgttggttg
      541 aaccgaatgt atatccacac aaagattatg tcgaaaatga agggccttta ccagagttta
      601 aatttatgta tgctgacaaa caaaatcatc atgaccaaca gagtaaaaac aacaaggata
      661 agcagcgtgc aaattacagt gacaaaaagc ataatgatca gccgggtcat ccaaaagcag
      721 tcacgccagc tgtacaacat gataaagcag tcacttcaaa cgctactgta aaagcattgc
      781 caaacacagg tgaatctgat aaaacaacac aattaccaat cgtattatca ttgttatctg
      841 tggggatttt agttttatta aaattgagaa aataaataaa agatagatgt ctacatgaaa
      901 gaaagggatg accctgtttg cgtagggttt tctcttctta ttttaactgt tcatatggca
      961 tggttggtcg tgtcagatta tcatgttatg catattgctg cgtaagtcga ggttaactgg
     1021 aaaacatata gataaaaatg aggtcaagtg gtgtgtatcg cttggtcttt tttatttgcg
     1081 aaaaaaattc accttattcc aaagtaattc tacaaattta aacgtgtaat aggatgaggt
     1141 gaaaagagat gttaacagct tataatgtac aatcacaaca aattttagca acacacgcac
     1201 gtaaggaaga agtgtatcat tgtccaattt gtaaagaggt attgatttta aggcaagggg
     1261 tgcgaaaagg tgctcatttt gcgcattatc ggcattcaat ggggcatgta catttaaaag
     1321 gagaatctgt tcagcacgca cgatgtaaag ctgctttgta tgaacaactt tgtaagattg
     1381 atccggcaac acaattggaa ccttacatta aaaaaatcac acaaattcca gatatgattt
     1441 tcagagcatg ggctattgag gttcaactga gttccattgc gataaagacg atgagagagc
     1501 ggacagaagg attgctaagt gaggggtatc gtgttttatg gttagcgaaa aaacctcaaa
     1561 tgaaaaaggg gctttatgtg ttatcgcaac tgcaacaaca atgtatcatc ccttctacaa
     1621 aaacgttgta ttgtatagat acgacttcat gtgagctgtt cagattatct cacatgatac
     1681 cgattaccgc aaaaaccttt catggagagt taacaccact ttctattcaa gcattcagcc
     1741 aagcgttaca acaggaccct cagtatgacg tgattatcag aaagttgtcg acatctcaaa
     1801 ttttgaaata cattcaacaa tgtcggcgtc aaaacaatgt actagagcct acgctgtcat
     1861 tgatgtacca aatgcgcatg ttagacgaac aagttgtgaa agttacaggc tttttatttc
     1921 cagaacaaat atacatccat acgcatccag tgctatggca actgtacata ttgaaatgtc
     1981 ttcaagcagg tataccgagt cattcactgt tgttaaagca gttgaagttt cgtcattttg
     2041 cggtagagga gtgcgaccgt caacagatta tcaaccggat cgtacagcgc tatttaaaac
     2101 ttctcaattt gtaggtatat agagtgcatt attatgagaa aagtgagaaa ataggagtgt
     2161 tacacacatc acgaggagga atttataatg agccaacaat tgacaagaga acaacaagaa
     2221 caaaagtatc cagaatattc atgggacctc acgacgattt tcgaaagtga tgagtcttgg
     2281 gaagcagcgt ttaaaacagt tgaaagctat cttggcaaag aagagcaatt caaaggtcat
     2341 ttaggtgatg acgccgaaac actgtatcaa gccctttcgt tagaagatga aattgaaaca
     2401 gaacttgaat cagtttatgt ttatgcacat ttaaaacaag accaagatac agcgaatgac
     2461 aagtacacag gttttgaagc gcgtgcacat caattagcga ttaaattaag ttcggcttgg
     2521 agtttcttag taccggaatt acttcaaatc gatgaaaaaa caatcgaatc ttacgttgct
     2581 gaacatgaag gattaaaacg tttcgaattt gatttgaact taattaacca aaaacgtccg
     2641 cacgtcttag atgcagaaaa agaaaaatta ttgactgaag cacaagatgc gttgtctacg
     2701 ccgagcaatg tgttcagtat gtttgataat gccgacttaa cttttgatga tgtaacagac
     2761 aaagacggtg aaaagcatgc attgacgcaa ggttcattca ttaaatattt agagtcagat
     2821 gatcgtctgt tacgtcaatc agcttatgaa aacatgtata aagcctatgg tagctataac
     2881 aatacattag cggcaacatt agcaggtgaa gtaaagaaac atgtgtttaa tgcacgttct
     2941 cacaactata agagtgcaag agcacaagca ttggggaaca atcatattcc tgaagcagta
     3001 tacgacaatc tcgtgaaaac agttcatgaa tacttaccac tcttacatcg ttacacaaaa
     3061 ttaagaaaag aattactcgg tgtcgatgat ttgaaaatgt acgatatgta tacgccaatg
     3121 gtgaaagaca tcaagtttga aatgccttat gacgaagcgg ttgagtggat gttaaaaggt
     3181 cttgaaccga tgggcgaaga atacttaaat gtcattaaag aaggtttgaa taaccgatgg
     3241 gtcgacgttt atgaaaacaa aggtaaacgt tcaggtgcct attcatcagg ttcacacaaa
     3301 accaatccat tcattttatt aaactggtct gacacagttt ctgacttata tacgttagta
     3361 catgaattcg gtcattcagc gcacagctat ttcagccgta aaaaccaacc atccaatatg
     3421 agcggttatt ctattttcgt agcggaagtg gcatctacat gtaatgaagc gttattaagc
     3481 cactacatgg agcaaaattt agatgacaag cgtcgtttac tgttgctcaa tcaagaatta
     3541 gaacgtttcc gtgcaacgtt attccgtcaa acaatgtttg cagaatttga acataaaatc
     3601 catcaaattg aagaagcagg ggaaccatta acagcaacac gtatgaacga agaatatgct
     3661 gcattaaatc gtcaatattt cggggatact gttgaaacag atgagtctat tagtaaagaa
     3721 tggtcgcgta ttccgcattt ctatatgaac tattacgtct atcaatatgc gacaggttac
     3781 agtgcagcac aaagtttaag tcatcaaatt ttgactgaag gtgcacctgc tgttgaacgt
     3841 tatatcaatg aattcttgaa aaaaggaagc tcaaattacc caatcgaaat tttgaaaaat
     3901 gccggtgtcg atatgacaac accaggtcca attgaggatg catgtaaagt gtttgaacaa
     3961 aaattagacg cttttgaaaa attaatgaaa gcttgaggat gctgaatccg tttacaatat
     4021 gtcagatttg tgaaagtttt aatttctggg tttaaatggg ttgaaacaac atcacacacg
     4081 tgatatatta tgaacatgaa attaatcaca ttacaaacat acccctttgt ttgaagtgaa
     4141 aaatttctcc catccccttt gtttagcgcc gtgtcaaaac acggcgtttt ttaatgcttt
     4201 catttcctgt ttatttacaa taattctcat atatgcgacg ttcaaaatca ttgatattcc
     4261 acttaaacaa caaaatattc cgtttatagc tgtatctatc taacttatga gtagtgtgct
     4321 atataaaaag agagagggag atattgagac atttaaagac agtatcaagt taggtccaat
     4381 atagtgttat ttattaatcc ttctttggtt agcgataaaa aatatgtgaa ccttttatta
     4441 gagacgattt agcttcactt tgatttaccc atcatacaaa tatatccaaa
//
LOCUS       DANHPA010000146         4473 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.147, whole genome shotgun sequence.
ACCESSION   DANHPA010000146 DANHPA010000000
VERSION     DANHPA010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 4473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4473
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.147"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..577
                     /locus_tag="PTC28_002258"
     CDS             <1..577
                     /locus_tag="PTC28_002258"
                     /inference="COORDINATES: protein motif:HMM:NF020387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RES family NAD+ phosphorylase"
                     /protein_id="HDK5717495.1"
                     /translation="TESIIKPEDFLLYRCRISNSEPIDISGMYAPPKEKASAGRLNSQ
                     WISHLYLGDDELACIQEVRAGFHDNVYIGEFKLKEPIKVVDLRHFEDKTLDFRDELQL
                     EYYLNRDTFIRISNELAKPANNDDKYIHYLPLQYMSDFIKSSDEKFQGILYKSVMNEN
                     ATNLLLFNPNLVECERVKKKTIKYIDYQYSR"
     gene            1043..1477
                     /locus_tag="PTC28_002259"
     CDS             1043..1477
                     /locus_tag="PTC28_002259"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717496.1"
                     /translation="MNKSIIIYLISYALIILGNSATFVAVYWIIGEKSTYSTLALIVS
                     IVFFIRFLTSRVITNKIDLFHHVKLNSNLFITRICILIIALFSLKYFDDVWTVCLLTI
                     VLNCLDVVSGSITPKFIKSFGEQQIVTLNSYLSIVEKLLYVL"
     gene            1666..2202
                     /locus_tag="PTC28_002260"
     CDS             1666..2202
                     /locus_tag="PTC28_002260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717497.1"
                     /translation="MIAIAANIMITPYTTLIIPYIRENISATPDIFTATEILMMVGGV
                     LIGILTSKYLKLDSYQSDKLFVVSAISQGILIILLSYNSSMILYFIVMFLLGACITAF
                     NIPFSIILQSKVPIKAIGKAKSHIISISTIFSAILYVLSSFLVRYMDISHVYLIFPIL
                     GLLTLAVYKFRGKIKFGM"
     gene            2481..>4473
                     /locus_tag="PTC28_002261"
     CDS             2481..>4473
                     /locus_tag="PTC28_002261"
                     /inference="COORDINATES: protein motif:HMM:NF016724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDK5717498.1"
                     /translation="MIKKESVHILKDGREIKVLDVIQDFKDEKQYALILYDNHQYIYE
                     MTALKQSVAPKNNTTTNKSTDEKIALYRAYFRGNDEIVATSFRTKVGKMVYYPWCLIR
                     KQAPCPKVKKPQFQCSKCTVHRFQKMTDDVIFNHLKGVNRYGKEVMYGLYPIVDQNQT
                     FLLVFDFDKADWRQEVKVLAKVAQSLKLDYLIEISQSGNGAHVWLFFEDKILARKARA
                     LGDIMLTQAMKQYPELSFEAFDRIFPNQDDVSNGGFGNLIALPLQGKRVLNGFSRFVD
                     DDLVLIDDIWSTLEQTTKISEEEVDGIINKYTHNLPSNYYKAEKKVQQDDLTLFEYAS
                     ASSDKKIDVTLGSEITIPIKELTRDETVRLRFLASFYNKAYFKALNQRLNTRNIPKMI
                     SLSEVEAGEIKLPRGLYQNVLKLYPKANIIHQQVEGKTIHATFQAELYEAQQQAYDAL
                     TQHNDGLLCAGTGFGKTVIASKMIVEKGVSTLIIVHSKSLAAQWKSQIETFVDLEDDP
                     FPEYTEKGRLKKKDKIGMIQGGKSKRSKNIDIALFQTLTTMDNLEDVFNDYGMVIVDE
                     AHHVAAKTFEDVMAKVNSRYVYGLTATPKREDGLENIIYFRIGPIRHFAKKEVPHHIA
                     QKLYLRFTASGEHLSNIQDQSIHDNHELIVADAQRNEVIV"
BASE COUNT         1525 a          633 c          874 g         1441 t
ORIGIN      
        1 tacagaaagt atcattaagc ctgaagactt tctgttgtat cgttgtagga tttctaactc
       61 cgagccaata gatatttcag gaatgtacgc cccacccaaa gaaaaagcat cagcaggaag
      121 attgaattcc cagtggataa gtcatcttta tttaggagat gatgaattgg catgtattca
      181 agaagtcaga gcgggttttc atgacaacgt atatatagga gaatttaaat taaaagaacc
      241 gataaaagtt gttgatttac gacattttga agacaaaacg ttagatttta gagatgaact
      301 ccaattagag tattatttaa atagagatac atttataaga atttctaatg aactcgccaa
      361 gcctgctaat aatgatgaca aatatatcca ttacttgccc ctacaataca tgagtgattt
      421 tattaaaagt tcggatgaaa agtttcaagg tattttgtac aaaagtgtta tgaatgaaaa
      481 tgctacgaat ttattgcttt ttaatcccaa tcttgttgaa tgtgaacgcg ttaaaaagaa
      541 aacaatcaaa tatattgact atcaatacag tcgataatgc agcattaaat gttttgaatc
      601 attgtaaata gatagttgaa ccagttactc gtattttatc ttctgcttca caagccactt
      661 tataccgcct aagaatactg taatgaacta ctccccctaa aaagcgataa aatagaatta
      721 tatttaagag atgaataagg aaatgacaac ttcttgcggt ttgatcctac cgagtgatta
      781 aaatgttgtt ctcctttttc gaactggttt tcactaaaaa gattgaattt tctgttttta
      841 tgtaagatat aattgtcggg atgtaaggga tgatggtacc gtaccaaaca catcaaccta
      901 aactgtcata taaaacgaaa gcatttgtgc tggaaataaa taagcacttg tgtagaaagc
      961 tataataaca gcagtggaga aacaaggcga ttgttcaaac aatgaaattt aacagaaaat
     1021 aggacattta ataggggata tcatgaacaa aagtataatt atatatctga tttcgtatgc
     1081 tttgattata ttagggaata gtgcaacatt tgtggcggta tattggatta ttggcgaaaa
     1141 atcaacttat tctactttag ctcttatcgt ttcaatcgtc tttttcattc gatttttgac
     1201 gtctagagtg attaccaaca aaattgattt atttcatcat gtgaaattaa atagcaattt
     1261 gtttattaca agaatatgca ttttgattat cgctttattt tcactgaaat attttgatga
     1321 tgtatggacg gtctgtctat taacgattgt tttgaactgt ttagacgtgg tcagcggttc
     1381 tattacaccg aaattcatta agagttttgg agaacagcaa attgttacat tgaattcata
     1441 tttatctatt gttgaaaaat tgctctatgt gttatgaatg tcaatcggct catttttaat
     1501 tgcaaggaca ggaattgata agatcatcta tattgagtta gtcatgtatg cgatcagttt
     1561 agtcttcata ttatcgatat caaaagattt ggaccacaat tttgaaaagg tggctgagca
     1621 agaagagaac gtggttacga tacttctatt gtgaattaca ttttgatgat agcgattgcg
     1681 gcaaatatta tgattacacc ctatacgaca ctcattatcc cgtatattag agaaaatatt
     1741 agtgccactc ctgatatctt tacagcaact gaaatattga tgatggttgg tggcgtgtta
     1801 atagggatat tgacctcgaa atatttaaaa ctggattcgt atcaatcgga caagttattt
     1861 gtagtgagcg cgatatctca aggtattttg attatattgc tttcgtataa ttcgagtatg
     1921 atcctatatt ttattgtcat gtttcttcta ggggcttgca ttacggcatt taacattcca
     1981 ttttcaatta ttttacaaag caaagtacct atcaaagcta tcggcaaagc aaaatctcat
     2041 attatcagta tatcgaccat attttcagcc attttatatg tgttatcgtc gtttttagtt
     2101 agatacatgg acatttctca tgtctacctt atttttccga tattaggttt gttgacattg
     2161 gcggtttata agtttagagg caagattaaa tttggaatgt aaaaatggtt gcgtgtgtat
     2221 gtttttgaag gcagtcactt ttttagtcca tattctcagc atttctcaaa ttcacgtttg
     2281 ggaagtgctt tttaattgtt ggaaagtagg aaaggaagtt gatgaattag agttaacgcc
     2341 aatgatttac ttcaactggt ccgaacggtg tcttttataa aaaaattata actaaatata
     2401 atatattttt gatttaaaag tctaaaatgt tatgatgagg tcgatggcac gatacgtatg
     2461 aaagggcttg gaggggttcg atgattaaga aagagagtgt ccatatatta aaagacggca
     2521 gagaaattaa agtgttagat gtgattcaag attttaaaga tgaaaaacaa tatgctctga
     2581 tattatatga caaccaccag tatatttatg agatgactgc cttgaaacaa tccgttgcgc
     2641 cgaaaaataa tacgacaact aacaaatcga ctgatgagaa aattgcgttg tatcgtgcat
     2701 attttcgtgg gaatgacgaa attgttgcga caagttttcg gacaaaagta ggcaagatgg
     2761 tgtattatcc atggtgttta attcgtaagc aagcaccatg tccgaaagtt aaaaagccac
     2821 aatttcaatg ctcgaagtgt accgtacatc gctttcaaaa gatgacggat gatgtgattt
     2881 ttaatcattt aaaaggagta aatcgttacg ggaaagaagt gatgtacgga ctttatccga
     2941 ttgtcgatca aaatcaaaca tttctgcttg tatttgactt tgataaagcg gactggcgac
     3001 aagaagtgaa agtgttagcg aaagtggctc aatcgttaaa attagactat ttaattgaaa
     3061 tttcgcaatc tggtaatggt gcacatgtat ggttgttttt tgaagataaa atattagcac
     3121 gtaaagcaag agcgttgggt gatattatgc tgactcaagc gatgaaacaa tatcctgagc
     3181 tgagttttga agcatttgat cggatatttc cgaatcaaga tgatgtatcc aatggtggtt
     3241 ttggaaattt aattgcttta ccgctgcaag gcaaacgcgt attgaatggt ttcagtcgat
     3301 ttgtagatga tgatttggtg cttattgatg atatatggag tactttagaa cagaccacga
     3361 aaattagtga ggaggaagtc gatggtatta taaataagta tacgcataat ctcccttcta
     3421 attattataa agctgagaaa aaagtacagc aagatgattt gacgctattt gaatatgcga
     3481 gtgcttcatc ggacaagaaa attgatgtga ctttaggttc agaaataacc attccgataa
     3541 aagagttaac gagagatgaa acagtgcggt taagattttt agctagtttt tataataaag
     3601 cttattttaa agcattaaat cagaggctca acacacgaaa tattcctaaa atgatttcac
     3661 tatccgaggt tgaagcgggt gaaataaaac tgccacgagg gttatatcaa aacgtgttaa
     3721 aactttatcc aaaagcaaat atcattcatc aacaagtcga aggtaaaacg attcatgcga
     3781 cttttcaagc tgaattatat gaagcgcaac aacaggctta tgacgcactt actcaacata
     3841 acgatggttt attatgtgcg ggaacaggtt ttggtaaaac ggttattgcg agcaaaatga
     3901 tagttgaaaa aggcgtcagt acattgatta tcgtacatag taaaagtcta gcagcacaat
     3961 ggaaatcaca gatagagacg tttgtagatt tagaagatga cccctttcct gaatatactg
     4021 agaaaggtag attaaagaag aaagataaaa ttggtatgat tcaaggaggc aaatcaaaaa
     4081 gaagtaaaaa tatagatatt gcactatttc aaacattaac gacgatggat aatttagaag
     4141 atgtatttaa tgactatggc atggtaattg tcgatgaggc ccaccatgtg gcagcaaaaa
     4201 cttttgagga tgtcatggct aaggtcaaca gtcgttatgt ttatggttta acagccacgc
     4261 ctaaacgaga agatggttta gaaaatatta tttattttag aattggacct attcgtcatt
     4321 ttgctaaaaa agaagtgcct catcatattg cacaaaaatt gtatttgagg tttacagcaa
     4381 gtggagaaca tctctcaaac attcaagatc aatcaattca tgataatcat gaactgattg
     4441 tagctgatgc tcaaagaaat gaagtcattg ttc
//
LOCUS       DANHPA010000147         4419 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.148, whole genome shotgun sequence.
ACCESSION   DANHPA010000147 DANHPA010000000
VERSION     DANHPA010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 4419)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4419)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4419
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.148"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            160..303
                     /locus_tag="PTC28_002262"
     CDS             160..303
                     /locus_tag="PTC28_002262"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717499.1"
                     /translation="MININPRELSMENMEIDLSIINEELSPEEVSESGLELPKLEVVD
                     KVY"
     gene            complement(757..2436)
                     /locus_tag="PTC28_002263"
     CDS             complement(757..2436)
                     /locus_tag="PTC28_002263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HDK5717500.1"
                     /translation="MKQLQKNEVGVYALGGLGEIGKNTYAIEYKDEIVIIDAGIKFPD
                     DNLLGIDYVIPDYTYLEQNQDRIVGLIITHGHEDHIGGVPYLLKKINVPIYSGPLALG
                     LIRNKLEEHHLLRQAELIEIDEDTVIDSKHFKVSFYLTTHSIPETYGVIVDTPEGKIV
                     HTGDFKFDFTPVGAPANIGKMAQLGDEGVLCLLSDSTNSLVPDFTLSEREVGQNVDKI
                     FRNCTGRIIFATFASNIYRVQQAVEAAVKYNRKIVTFGRSMENNIKIGTELGYIKAPP
                     ETFVEPNKINSIPKHELLILCTGSQGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPI
                     PGNTKSINRTINALYQAGAEVIHSKISNIHTSGHGSQGDQQLMLRLIRPKYFLPIHGE
                     YRMLVAHGQTGVDCGVPEENVFIHDIGDVLALTRDSARTAGRIPSGNVLVDGSGIGDI
                     GNVVIRDRKLLSEEGLVIVVVSIDFNKNQLLSGPDIISRGFVYMRESGQLIYDAQKKI
                     KQDVIYKLNNNENIQWHQVKSSIIETLQPYLFEKTARKPMILPVIMKVNEK"
     gene            complement(2436..2651)
                     /locus_tag="PTC28_002264"
     CDS             complement(2436..2651)
                     /locus_tag="PTC28_002264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-dependent RNA polymerase auxiliary subunit
                     epsilon family protein"
                     /protein_id="HDK5717501.1"
                     /translation="MSIFKVFYQHNRDEVIVRENTQSIYVEAQSEEQVRRYLKERNYN
                     IEFITKLEGAHLEYEQQSERFNVERAQ"
     gene            2990..3262
                     /locus_tag="PTC28_002265"
     CDS             2990..3262
                     /locus_tag="PTC28_002265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717502.1"
                     /translation="MKSASQLLEEVKNERNREDKFLCEIQFEVRRNEVTMFFEYEEVQ
                     MATQEAHYFRKHNHDPEFLDIETFETLKKALEEEGIRYKQRRDMFM"
     gene            complement(3876..>4419)
                     /locus_tag="PTC28_002266"
     CDS             complement(3876..>4419)
                     /locus_tag="PTC28_002266"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HDK5717503.1"
                     /translation="MKDIIRDGHPTLRQRAKEVEFPLTEEERQTLLDMQTFLKNSQDP
                     EIAEKYQLRSGVGLAAPQINVPKRMFAVYLPDDGEGHSYDFAIVNPKIVSHSVQDAYL
                     PTGEGCLSVDEDVPGLVHRHYRIKLKGYDIDGNEINLRLKGYPAIVVQHELDHLNGVL
                     FYDHIDQEHPLQPKNGAMEV"
BASE COUNT         1365 a          796 c          841 g         1417 t
ORIGIN      
        1 aaataaataa agttattatt tctgaaccca caggaaggtt tccatggttt cctagggaag
       61 cggattggaa caattcctgg ctgaatattt taaaaaaaca aagaaaatag acaattcagt
      121 ttatttatgt tatatttaaa gtgaaggagg gtggtttaaa tgataaatat taatccaaga
      181 gaactttcaa tggaaaatat ggaaattgac ttaagtatta ttaatgaaga gctttcccca
      241 gaagaagtat cagaatcagg attggaattg cctaagttag aggtagtgga caaagtatac
      301 taagatgtac tttatctatt tgaatctggg actaacccca aaatttgttg gagtctagga
      361 tatagatatg atttctagat tccttttgta aatggcagtt ataaaatgta ggaaaatagc
      421 ggaatgaaag tgctgttttt cctgcatttt ttagtgcgct cggcatgggt gacatcttga
      481 cggtgaaagt ctgttacagg cttggtagta ggaagtgtta gcgaaaaaca agggtgtcta
      541 ttgacaagtg gaatctgaag gaagtcggac tcaaacaatc gcactgagat ataaaattaa
      601 agaagacaaa aagtttgatt ggtaatagcg atagatcgtt gtataaaaaa tctctcatgt
      661 ataggactaa cgacattgcg tttttcaacc ctttatacat aaaattaacg agtctaggca
      721 tattgttgtc ctagactcgt ttccttattg atatatctat ttttcattca ctttcataat
      781 gactggtaaa atcattggtt tacgtgctgt tttctcaaat aagtacggtt gtaatgtttc
      841 gataatagat gatttcactt gatgccactg aatgttttcg ttgttattca atttatagat
      901 gacatcttgc ttaattttct tttgggcgtc gtaaatcaat tgaccagatt ctcgcatgta
      961 gacaaagcca cgtgaaataa tgtctggacc tgataacagt tggtttttgt tgaagtcaat
     1021 gctaaccacg acaatgacta atccttcttc agacaataac ttacggtctc gaatgacaac
     1081 attcccaata tcaccaatac cactaccatc gactaataca ttacctgatg ggatacggcc
     1141 tgctgtacgt gcactgtctc gtgtcaacgc aagaacgtca ccgatatcat ggatgaagac
     1201 attttcttct ggtactccac agtccacacc tgtttgaccg tgtgcaacga gcatacgata
     1261 ttcaccgtgg attggtaaga aatatttcgg tctaattaag cgtaacatca actgttgatc
     1321 accttgagag ccgtgaccag acgtatggat gtttgaaatc ttactatgaa tgacttcagc
     1381 gccggcttga tacaaggcat tgatcgtacg gttaatgctt ttcgtattac ctggaatagg
     1441 tgacgaactg aatacaaccg tgtcttcagg aatgatttta atctgcttat gtgtaccatt
     1501 tgcgatacgt gataacgccg ccatcggttc accttgcgag cctgtacata aaattaataa
     1561 ttcatgcttt ggaatgctat taattttgtt tggctcaaca aatgtttcag ggggtgcttt
     1621 aatataccct aactctgttc cgattttgat attattttcc atcgaacgtc caaacgtcac
     1681 gattttacgg ttgtatttaa ctgcggcttc gacggcttgt tgcacacgat aaatgtttga
     1741 cgcgaaagtc gcaaaaataa tacgtcctgt acaattacgg aaaattttat ctacgttttg
     1801 accgacttca cgttcactta gtgtaaagtc tggtacgagt gaattggtag agtcagaaag
     1861 taaacagagt acaccttcat caccgagttg cgccatttta ccaatattgg ctggtgcgcc
     1921 gacgggtgtg aagtcaaact taaagtcacc agtatgcacg attttacctt caggcgtatc
     1981 gacaataaca ccgtatgttt caggaatact atgtgttgtc aaataaaaac tcactttaaa
     2041 atgttttgaa tcaatgacag tatcttcatc aatttcaatc aattcagctt ggcgtaataa
     2101 atgatgttct tctaatttat tacgaattaa accgagtgcg agtggaccgc tgtaaattgg
     2161 tacattaatc tttttgagca ggtagggcac accaccgata tgatcctcgt gaccatgtgt
     2221 gataattaag cctacaattc tatcttggtt ttgttcaaga tacgtgtagt caggtatgac
     2281 atagtcgata ccgagtaaat tatcatcggg gaatttgatt cctgcgtcaa tgattacaat
     2341 ttcatcttta tactcgatgg cgtaagtgtt tttaccaatt tcacctaaac cacctaatgc
     2401 gtatacgcca acttcatttt tttgaagttg tttcattatt gcgcgcgctc cacattaaaa
     2461 cgttcggatt gttgttcata ctctaaatgt gcgccctcta atttagttat gaattcaata
     2521 ttatagttgc gttctttcaa ataacgacga acttgttctt cagattgtgc ttcaacataa
     2581 atgctttgtg tattttcacg tacgatgact tcatcgcgat tatgttgata aaaaacttta
     2641 aaaattgaca tatattttcc tcctaagttg aatcacttat ctttaattga tggatatgct
     2701 tgaacaattg aaatgaacag tgaaaataaa aaacatgaat cgaatatgca tctctaggaa
     2761 tgtctacatc attcaattca ccagtcactc acagctcatt ttcaatatgt atagcggtta
     2821 ttaaatttcc gttctcgttt gagtgtatgg cgatgtgcgc atacagccca gttggtttta
     2881 ttttacatga tgttatcgaa taaataaagc ggaatgtgat aaactagaga gtatcttata
     2941 attaaatgaa tggaatctca tttaaaattc cccgaaatag gtgatgaaga tgaaaagtgc
     3001 gagccaatta ctagaagaag ttaaaaacga acggaaccgg gaagataagt ttttgtgtga
     3061 aattcaattt gaagtaagac gtaatgaagt aacgatgttt tttgagtatg aagaagttca
     3121 aatggcgacg caagaagcac attatttcag aaaacacaat catgaccctg aatttttgga
     3181 tattgaaaca tttgaaacac ttaaaaaggc attggaagaa gaggggattc gttataaaca
     3241 acgtagagac atgtttatgt aacgtatcgg atgagtcgaa atagcatcac aacgaatcaa
     3301 acagcggcga aggattgact ttaccgctct ttttttatcc tacaacattg tgcaaatgaa
     3361 aataggaatg ggactgggat attacatttt cccaatccct atatacatat ggcgttgcac
     3421 cattaaagat gataaaacga ccgaaaaata aaggcaaatt agatgaaaat ggatgctctt
     3481 gttttcatga tttcataaac ttgcctcagt tccactgtat ttcatataag gttacccaga
     3541 agactgaggc acctgaggaa atgcgtgcat actgctaaca gttacttctt tacattaata
     3601 gtggttgctg tttatcgcag cagctatctg atttctcaat gtacacgctt atgcgaagtc
     3661 gagtcagccg tgagggggca gtacgacgaa atctttgcta cacatgagat ttctgtactg
     3721 ttcccaaaat ccactaagtc ctcactaaat gtaatagttt aatcaagcgt tagtaagttg
     3781 aagggccagc ccctataaac gcgaggctat gatggcaacc caattcttat attccatccg
     3841 ctaccttttt aatcgtttta aatagtttgt tattcttaaa cttccatcgc accattttta
     3901 ggttgcaatg gatgttcttg gtcgatatga tcataaaaca gtacgccgtt aagatggtcc
     3961 aattcatgtt gtactacaat cgctggataa cctttcaagc gtaagttgat ctcattgcca
     4021 tcaatatcat aacctttaag tttgatacgg taatggcgat gaacaaggcc tggaacatct
     4081 tcgtccacgc tcaagcaacc ttcacctgtt ggcaaatacg catcttgaac actatgactc
     4141 acaatttttg ggtttacaat cgcaaaatca tatgaatgtc cttcaccatc atcaggtaaa
     4201 taaaccgcaa acatgcgttt cggtacatta atttgaggtg ctgctaatcc aaccccacta
     4261 cgtaattgat atttttcagc aatttctggg tcttgactat tttttaaaaa agtttgcata
     4321 tctaataaag tttgtcgttc ttcttcagtt aatgggaact ccacttcttt tgctctttgg
     4381 cgaagtgtag gatgtccatc tctaataata tctttcatt
//
LOCUS       DANHPA010000148         4342 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.150, whole genome shotgun sequence.
ACCESSION   DANHPA010000148 DANHPA010000000
VERSION     DANHPA010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 4342)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4342)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4342
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.150"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            81..1115
                     /gene="hemE"
                     /locus_tag="PTC28_002267"
     CDS             81..1115
                     /gene="hemE"
                     /locus_tag="PTC28_002267"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HDK5717504.1"
                     /translation="MGTTKNDTILRAIKGEVVSHTPVWFMRQAGRSQPEYRKLKEKYS
                     LFDITHQPELCAYVTALPVEQYDTDAAVLYKDIMTPLKSIGVDVDIKSGIGPVIANPI
                     RQMSDVEALGQIDPERDVPYVLDTIKLLTEEKLNVPLIGFTGAPFTLASYMIEGGPSK
                     NYNQTKALMYSDEATWFKLMDVLTDMSIRYVGAQVKAGAQLIQVFDSWVGALNQPDYD
                     YYIKPCMEKLITGIKAYNVPVIMFGVGASHLIESWNALPIDVLGLDWRTSINEARAKG
                     VSKALQGNLDPSILLAPWEVIEARLKPILDQGVAHGRHIFNLGHGVFPEVKPETLKHV
                     AQFVHDYTKR"
     gene            1153..2085
                     /gene="hemH"
                     /locus_tag="PTC28_002268"
     CDS             1153..2085
                     /gene="hemH"
                     /locus_tag="PTC28_002268"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HDK5717505.1"
                     /translation="MKKQIGLLVMAYGTPYQKSDIEPYYTDIRHGRKPSEEELNDLIS
                     RYEAIGGLSPLAGTTERQADAIQKALNETYEDVEFKLYIGLKHIHPFIEDAVTQMNED
                     GIKEAVTVVLAPHFSNFSIASYNRRAKDKADTFGIQLHHVQHYYQQQQFIDYWTMRVN
                     ETLENIPQEEHAKTVLVVSAHSLPEKMIKESNDPYPFELEDTARLIQEQSAIEHVAVG
                     WQSEGNTGTPWLGPDVQDLTRDLFEQEGYQHFIYTPVGFVAEHLEVLYDNDYECKVVC
                     DAVGATYHRPPMPDTHPLFIGAIVSEITKIFPKA"
     gene            2091..3494
                     /locus_tag="PTC28_002269"
     CDS             2091..3494
                     /locus_tag="PTC28_002269"
                     /EC_number="1.3.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019164996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase"
                     /protein_id="HDK5717506.1"
                     /translation="MTNVAIIGAGITGLSSAYFIKQKYPHVNVTIYEATDRPGGKIKT
                     VHHDGYTIELGPESYLGRKTIMTEVAKAVGMTDDDIVTNETGQSYIFANDTLYPIPGG
                     AILGVPTDIKPFMSTKLISMKGKLRALKDLTIKPIEMENEDMSVGEFFRTRLGDEVLE
                     NLIEPLLSGIYGTDIDVLSLMSTFPNFKALEEEHGSIIKGMQHVKKKRQQQAQHNQQG
                     PQGQFKQFRHGLNDFVNKLEQWLKAHDVTFHYETPVHDLIGTQKGYYVELNDESRSFY
                     DGVIVATPHQVFREWFSTDPMFDYFSKLEASSVATIVFAFDEANIENTSDGTGFVVAR
                     TSATDITACTWTTKKWPHTTPEGKVLIRAYIGKQGDNIVNEKTDEELVAIAKNDLQQM
                     MTFHGEPDFTIVNKMPYASPQYHVGHIARIKAIQQHICDNYQHLQITGAPFEAVGLPD
                     CIRQAETAVKQLLSRIG"
     gene            3752..4306
                     /locus_tag="PTC28_002270"
     CDS             3752..4306
                     /locus_tag="PTC28_002270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase family protein"
                     /protein_id="HDK5717507.1"
                     /translation="MTKLYIVHGYQADASKHWFPWLKQSLEIEGHDVEVLNLPNSHEP
                     HVEEWLTYMRQTIPEVDADTIFVAHSLGVITTLKFLNDLDVSKVGGLAIVSGFKDKLE
                     GMETLDAFIEQEIDFDQLKHKIIKRFGIASKTDDIVPYTLTAELCKALDAKFYLQEEG
                     GHFLEKDGYDTFLFLRNKILKNFD"
BASE COUNT         1456 a          730 c          919 g         1237 t
ORIGIN      
        1 gacatttgag ccagatactg atgttagagg ggcttgatat gatatattaa tgaagaatga
       61 cgttgtttaa ggaggaacat atgggtacga caaaaaacga tacaattttg cgtgcgatta
      121 aaggagaagt agtctctcat acccctgtat ggtttatgag gcaggcagga cgttcacaac
      181 cagaatatcg caaattaaaa gaaaaatact cactattcga cattacacat caaccagaat
      241 tatgtgctta tgtcactgca ttaccggttg aacaatacga cacagatgca gcagtattat
      301 ataaagatat tatgacacca ttaaaatcaa tcggtgtaga tgttgatatt aaatctggca
      361 ttggacccgt cattgctaat ccgattcgac aaatgtctga tgtggaagca ttaggtcaaa
      421 tcgatccaga gcgcgatgtc ccttatgttt tagacacaat caaattattg actgaagaaa
      481 aattaaatgt cccattgatt ggctttacag gtgcaccatt tactttagcc agttacatga
      541 ttgaaggtgg cccatctaaa aactataatc agacgaaagc actgatgtat agtgatgaag
      601 cgacatggtt taaattaatg gacgtgttga cagacatgtc gattcgatac gttggtgctc
      661 aagtgaaagc aggtgcacag ctcattcaag tgtttgattc atgggtaggg gctttgaatc
      721 aaccggacta tgattactat attaagccat gtatggaaaa attgatcaca gggattaaag
      781 catacaacgt ccctgtcata atgtttggtg tgggggcaag ccatttaata gagtcatgga
      841 atgctttacc tatcgatgtc ttagggctag attggcgtac atcgattaat gaagcacgtg
      901 ccaaaggggt ttcaaaagca ttacaaggca atttagaccc aagcatttta ttggcaccgt
      961 gggaagtgat tgaagcacgc ttgaaaccga ttttagatca aggggtggct cacggacgac
     1021 acattttcaa tttaggtcac ggggtctttc ctgaagtgaa accggaaacg ttaaaacacg
     1081 tggctcaatt tgtacatgac tatacaaaac gttaagttgc aagaatcgag tatataaagg
     1141 acggattaaa agatgaaaaa acaaatagga ttattagtga tggcatacgg gacaccttac
     1201 caaaagagtg acatcgaacc atattatacc gatattagac acggtagaaa gccatccgaa
     1261 gaagagttga atgatctcat ttcacgctat gaggcgattg gggggctttc gccgttagca
     1321 ggaacgactg aacgtcaagc tgatgcaatt cagaaggcgc taaatgagac ttatgaagat
     1381 gttgaattca agttgtatat cggattaaaa catattcacc catttattga agatgctgtg
     1441 acacaaatga atgaagatgg tattaaagaa gcagtaacag tcgttttagc accgcatttt
     1501 tctaatttct caatagcttc atataatcgt cgtgctaaag acaaagccga cacgtttggc
     1561 attcagttgc atcatgttca acattattat caacagcaac aatttatcga ttactggacg
     1621 atgcgtgtga atgagacttt agaaaatatt ccacaagaag aacacgcaaa aactgttctc
     1681 gtcgtatcag cacacagctt gcctgaaaaa atgattaaag aaagtaatga tccatatcca
     1741 tttgaattag aagatacagc gcgtttaatt caagaacagt cagcaattga acatgttgca
     1801 gtgggttggc aatcagaggg caacacaggt acaccgtggt tagggcctga tgttcaagat
     1861 ttaacacgtg acttattcga acaagaaggg tatcaacatt tcatttatac accagttggt
     1921 tttgttgcag aacatttaga agtgttatac gacaatgatt acgaatgtaa agtggtttgt
     1981 gatgcagtcg gcgcaacata tcatcgccca cctatgcctg acacacatcc attgtttatc
     2041 ggtgcaattg tgagcgaaat tacaaaaatt ttcccgaaag cgtgagaaac atgacaaatg
     2101 tagcaatcat tggtgcgggt attacaggtt tatcaagtgc atactttatt aaacaaaagt
     2161 atccgcatgt gaatgtaacg atttatgaag caacagatcg acctggtggc aaaattaaaa
     2221 cggtacacca tgatggctat acgattgaac ttggccccga atcttattta ggtcgcaaaa
     2281 cgattatgac tgaagtggct aaagcagtag ggatgacaga tgatgatatc gtgacaaatg
     2341 aaacgggtca atcgtatatt tttgccaatg atacattata tccgattcca ggcggcgcaa
     2401 ttttaggtgt accgactgac attaaaccat ttatgtcaac aaaactcatc tcaatgaaag
     2461 ggaaattgcg cgcattaaaa gatttgacga ttaaaccgat tgagatggaa aatgaagaca
     2521 tgtcggtagg tgaatttttt aggacacgtc tcggtgacga agtgcttgaa aatttaattg
     2581 aaccgttact gagtggtatt tatggtacag acattgatgt gttgagttta atgagtacgt
     2641 ttccgaactt caaagcatta gaggaagagc acggtagtat cattaaaggg atgcaacatg
     2701 tcaaaaaaaa gcgtcaacaa caagcacaac ataatcaaca aggcccacaa ggacaattta
     2761 agcaattcag acatggtttg aatgactttg tgaacaaact tgaacaatgg cttaaagcgc
     2821 atgatgtgac atttcattat gaaacgcccg tgcatgattt aattggcaca caaaaggggt
     2881 attacgttga gttaaatgac gaatcgcgtt cattttatga tggtgtcatt gtcgcaacgc
     2941 cacatcaagt gtttagagag tggtttagca ctgatccgat gtttgattat ttttcgaaac
     3001 tagaagcatc atctgtcgct acgattgtct ttgcatttga tgaagccaat attgaaaata
     3061 cgtctgatgg tacaggattt gtggttgcga gaacgagtgc gacggatatt actgcgtgta
     3121 cgtggacaac caaaaaatgg ccacatacga caccagaagg caaagtcctc attcgtgcat
     3181 atatcggcaa acaaggtgat aacatcgtta atgaaaagac agatgaagaa ctggtagcaa
     3241 tcgctaaaaa tgacttacaa caaatgatga catttcacgg cgaacctgac tttacaatcg
     3301 taaataaaat gccgtatgcg agtcctcaat atcacgtcgg tcatattgct cgaattaaag
     3361 cgatacaaca acatatttgt gacaattatc aacatttaca aattacaggt gcaccgtttg
     3421 aagcggttgg attgccagac tgtattcgac aagcagaaac agcagttaaa caattgttgt
     3481 cacgaattgg ataaatgata agaaaaaagc tgcgagatgt tgcagctttt ttcattttct
     3541 tgctgattgt gactaaccac atgatttaat tatttataaa aacattcaaa ggtctttctg
     3601 tgtcatttaa ctcaaatgcg aacttaattt gtaaagtttt gtgatagcac tctattattt
     3661 gacgatttta aaaatttatg ttttcaaatg gatatgttga tttatgttat gataatagtg
     3721 ttgaatctat agaaagaagg cgttttgtat catgacaaag ctatatattg tgcatggtta
     3781 ccaagccgat gcatcaaagc attggtttcc atggttaaag caatcacttg aaattgaagg
     3841 ccatgatgta gaagtactca acttacccaa ctcgcatgaa cctcatgtcg aagaatggct
     3901 tacatatatg cgacaaacaa ttccagaagt tgatgctgat accattttcg ttgcacatag
     3961 tttaggtgtc attacaactt tgaaattttt aaacgattta gatgtgtcga aagtaggtgg
     4021 attagctatt gtttcaggtt tcaaagataa gttagaaggc atggaaactt tggatgcctt
     4081 tattgaacaa gaaattgatt tcgaccagct taaacataag attattaaac gttttgggat
     4141 tgcttctaaa acagacgata tcgtgccata tacgttaaca gctgaactgt gtaaggcact
     4201 tgatgctaaa ttttatttac aagaagaggg aggccatttt cttgaaaaag atggctatga
     4261 tacatttctg ttcttgagaa ataaaatatt aaagaatttc gattaaaata tgacaaattc
     4321 gtaaacgtat atcaattcgc tt
//
LOCUS       DANHPA010000149         4258 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.151, whole genome shotgun sequence.
ACCESSION   DANHPA010000149 DANHPA010000000
VERSION     DANHPA010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 4258)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4258)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4258
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.151"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(74..940)
                     /locus_tag="PTC28_002271"
     CDS             complement(74..940)
                     /locus_tag="PTC28_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDK5717508.1"
                     /translation="MVKLIATDMDGTLLNAAHEVSKENVEAIQYAQSQGVTVVIATGR
                     AFYEANDPIIPTGLKVPYICLNGAEVRDESFDIVHTSSLNHGLYQRIRQTLNNENMYY
                     QVYTNFGIYTEDPEKDLAIYLDIAKHSGQKGDVEKIRKHIQHRIDLGTLKVVDNYDKI
                     ESVPGELIMKVLAYDKDLAKIERVKKQLSESSNLAVSSSSLGNIEITHIDAQKGLALQ
                     AIAEQLGIDMADTMAVGDNLNDKSMLERAGVAVAMENALPELKDIATFVTDSNENSGV
                     AKAIYRALGKEE"
     gene            complement(1102..1575)
                     /locus_tag="PTC28_002272"
     CDS             complement(1102..1575)
                     /locus_tag="PTC28_002272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HDK5717509.1"
                     /translation="MTSHQYYMSIALEEARKAAKKGEVPIGAVVVKNGKIIARAHNLR
                     ETDQSPTAHAEHLAMERAAAQLGTWRLEGCTLYVTLEPCVMCAGTIVMSRVDTVVFGA
                     MDPKGGCVGSLMNLVQDSRMNHRASVVSGVLAYSCGEILRQFFRALRLYKKRQKN"
     gene            1645..2268
                     /locus_tag="PTC28_002273"
     CDS             1645..2268
                     /locus_tag="PTC28_002273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HDK5717510.1"
                     /translation="MKKPFIAIEGPIGVGKSSLAHQLSQSYHFYEAKEIVGENPYLSD
                     FYSDISKWSFQTEMFFLCHRYKDYQDLAEHTDGIVSDYHIYKNKIFARNTLNDAEYDK
                     FSRIYDILTEDLISPDFTVILDADLSVLKQRIAKRDRSFEANIQDSYLLKLKEDYANY
                     YHSLKSEGHAVLWVDTTDLDFVQNEADYTYVFNQINELIGGHNHESI"
     gene            2255..2920
                     /locus_tag="PTC28_002274"
     CDS             2255..2920
                     /locus_tag="PTC28_002274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HDK5717511.1"
                     /translation="MNQYNIPSNAIITIAGTVGVGKSSLTRAIAEKLNFRTSYENVEH
                     NPYLDKFYHDFKRWSFHLQMYFLAERFKEQKRMFEYGGGFVQDRSIYEDVDIFAKMHV
                     EQGTMTPEDFKTYSNLFEAMVLTPYFPKPDVLIYLESDYEAVLERIQARGRQMEIETD
                     PEYWEMLFQRYENWINQFNACPVVRVNINEYDLLSHPESVDVVLKKISHVIHTYRQVD
                     QRS"
     gene            complement(3481..4179)
                     /locus_tag="PTC28_002275"
     CDS             complement(3481..4179)
                     /locus_tag="PTC28_002275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDK5717512.1"
                     /translation="MISPKWILFDKDGTLIHFDDSWTKIGIQLVNDICDHFKLEDRLA
                     VYQAIGIKDERFEVNSVMNGGTLKDLIAVLQQFTNENIADWVAQHSQTLISQRVPEIN
                     LYEGVASLMQRLKAQGYALGIVTSDNHTGVTQFLEETQLTDVFDMVISTNDGQYEKPD
                     VRLLQPLWNRGVRGEDVIMVGDTDNDMLTGKNMKSALNVGVRTGLGQEAKFEAADVVI
                     DHVGLLENVLPKAK"
BASE COUNT         1282 a          888 c          689 g         1399 t
ORIGIN      
        1 taaaagccat taattattca cagaaaatga attttaatgg cttcataaat cgtatttact
       61 tatttttaaa actttactct tctttcccta atgcacgata gatggctttg gcaacaccgc
      121 tgttttcatt cgaatctgtc acaaatgttg caatatcttt caattctggc aaggcatttt
      181 ccattgcgac ggcaacgcca gcacgttcta acatcgattt atcatttaag ttatcgccaa
      241 ctgccatcgt atccgccata tcgataccga gttgttcagc aatggcttgt aaggctagcc
      301 ctttttgtgc atcaatatgt gtaatttcaa tgttaccgag tgacgatgag gaaactgcta
      361 agttgctact ttctgataat tgttttttca cacgctcaat tttagctaaa tctttgtcgt
      421 acgccaaaac tttcatgata agttcaccag gtacagattc gattttgtca taattatcaa
      481 cgacttttaa tgttccaaga tcaatgcgat gttgaatatg ctttctgatt ttctctacat
      541 cgcctttttg acctgagtgt ttcgcaatat ctaaatatat ggctaaatct ttttcggggt
      601 cttctgtata aataccaaag ttcgtataca cttgatagta catattttca ttgtttaatg
      661 tttgtcgaat gcgttggtac aaaccgtgat tcaaactgga ggtatgtaca atatcaaaac
      721 tttcatctct cacttctgca ccattcaaac aaatatatgg tacttttaac cctgtcggaa
      781 taattggatc gtttgcttca taaaatgcac gtccagtcgc aatgaccact gtcacacctt
      841 gagactgcgc atattgaatc gcctcaacat tttcttttga tacttcatga gctgcattca
      901 acaatgtccc atccatatct gttgctatca gtttcaccat ctttatccct ctctctactt
      961 ttcgttcttc ctttactcgt tttaaatata atctcatttt aacaaagtta cataaggaag
     1021 taccgtaaaa tgaattccta tcacgcttct taccattcgc tcatatagag aaatcacact
     1081 ttgaaatggt aaaacaatga cttaattctt ttgtcgtttt ttatacaagc gtaatgctct
     1141 aaaaaattgg cgtaatattt ctccacatga ataagccaac actcctgaca caacagacgc
     1201 acggtgattc attcgactat cttgaacgag attcatcaaa ctccccacac atcccccttt
     1261 tggatccatc gccccaaaaa caactgtatc gacacgactc attacaatcg tgcccgcaca
     1321 catcacacac ggctctaatg tgacatacaa cgtgcatcct tctaaacgcc acgtccctag
     1381 ttgtgcggct gctcgctcca tagccagatg ttccgcgtgg gcggttgggc tttgatcagt
     1441 ttctcgtaaa ttgtgagcac gtgctataat ttttccattt ttaacaacga cagcaccaat
     1501 tggcacttcc ccttttttag cagcttttct cgcctcttct agcgcaattg acatataata
     1561 ttgatgactt gtcatacaga aatagcctca cttatgttaa aatttataat actgaataaa
     1621 taaaataata ctggagcgaa atatatgaaa aaaccgttta tcgcaattga aggtcctata
     1681 ggcgttggca aatcttcatt agcacaccag ttgagtcaat cttatcactt ttatgaagcg
     1741 aaagaaattg tcggtgaaaa cccctatttg tcagattttt atagtgatat ttcgaaatgg
     1801 agttttcaaa ctgagatgtt ctttttatgc caccgttaca aagattatca agaccttgca
     1861 gaacacacag atggtatagt cagtgactat catatttata aaaataaaat ctttgcacgt
     1921 aatacgttaa atgatgcaga atacgataaa ttttcaagaa tttacgatat tttaacagaa
     1981 gatctcatct caccagattt tacggtcatt ttagatgcag atttaagtgt actcaaacaa
     2041 cgtatcgcta aacgtgatcg tagttttgaa gccaatattc aagatagtta tctattgaaa
     2101 ttaaaagaag attatgcaaa ttactatcat tctttaaaaa gcgaaggaca tgcagtgtta
     2161 tgggtggata cgaccgacct tgactttgtc caaaatgaag cagattatac atatgtattt
     2221 aaccaaatta atgaactcat tggaggccat aatcatgaat caatataata taccctcaaa
     2281 cgcgattatt accattgccg gtactgtcgg tgttggcaaa tcatctttaa cccgcgcaat
     2341 agcagaaaaa cttaatttta gaacatctta tgaaaatgta gaacataatc cctatttaga
     2401 taaattttat catgatttca aacgttggag ctttcattta cagatgtact ttttagcaga
     2461 acgctttaaa gagcaaaaac gtatgtttga gtatgggggt ggctttgttc aagaccgttc
     2521 aatttatgaa gatgtcgata tctttgcaaa gatgcatgta gaacaaggta cgatgacgcc
     2581 tgaagatttc aaaacatact ccaacctttt tgaagcaatg gtgttaacac cctatttccc
     2641 taaacctgac gtcctcattt acctcgagtc agattatgaa gcagttcttg aacgcatcca
     2701 agcacgtggg cgtcaaatgg aaatcgaaac agatcctgaa tattgggaaa tgctgttcca
     2761 acgttatgag aattggatta accaatttaa tgcttgtcct gttgttcgtg taaatattaa
     2821 tgaatatgat ttattgagtc accctgaatc ggtcgatgtg gtattgaaaa aaatcagtca
     2881 tgtgatccat acctatagac aagtcgatca acgttcataa atgttttaat caacaggtct
     2941 ttaaggtcga catattaagg ctcgcgttcc tagttggttc acttcaacta aaatcgactt
     3001 aattgaagcg tacatgagat ggtggccgaa ttgggtttta gagcagtaca aaaacctcat
     3061 gtgtaagaaa gatttcgctg tactgccccc gcaaggctaa ctagacttct caaatgcaaa
     3121 gtgcttgaga gattagacag ctactgtgtt aaacagcagt cactattaat catcagaaat
     3181 cgcgttaagc ctttgttttg gttttggcct ccaggaatct cacctcgttt tgtagtcgct
     3241 attctacagc tctttattaa tgcttgtccc tttatcattt taaacatttc taaattaaaa
     3301 tatgtaagaa agaggaaata acttttgaag atatcgtctt tcttttattt attcaaacgc
     3361 tcagattcat aaagaaaaca ggctggaaga ttttccagcc tgttttcttt atggctctgt
     3421 tttgaatgtc tacctcacta cttacgaaat gaaagcaaca agcaatttta ttggtttgac
     3481 ttattttgct ttgggcaaga cgttttccaa taaaccgacg tggtcaatga cgacatctgc
     3541 cgcttcaaac tttgcctctt gtcctaatcc tgtacggacg cctacattca gcgcactttt
     3601 catattttta ccggtcaaca tatcattatc tgtgtcgccc accattatta catcttctcc
     3661 acgcacaccg cgattccata atggctgaag taaacgaaca tccggctttt catactgtcc
     3721 atcattcgtt gaaatgacca tatcaaatac atccgttaat tgcgtttctt ccaaaaattg
     3781 cgtcacgcct gtatgattat cactagttac gatgcctaac gcgtaacctt gcgcctttaa
     3841 acgttgcatt aacgatgcta caccttcata aaggttgatt tcaggtacac gttgactgat
     3901 taaagtttga ctgtgttgtg cgacccaatc agcaatattt tcattcgtaa actgttgaag
     3961 aactgcaatt aaatctttca acgtcccccc attcatgaca ctattcactt cgaaccgttc
     4021 atctttaatc ccgattgcct gatatactgc tagacgatct tcaagcttaa aatggtcaca
     4081 tatatcatta actaattgta tccctatttt tgtccaacta tcatcaaaat gtatcagcgt
     4141 tccatcttta tcaaataaaa tccacttcgg tgaaatcatt tttttgcctc catttatgtc
     4201 tttgtatcaa actaaaagtg aaaaaataac gcattgactt tccaaaaaga ctctcttg
//
LOCUS       DANHPA010000150         4256 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.152, whole genome shotgun sequence.
ACCESSION   DANHPA010000150 DANHPA010000000
VERSION     DANHPA010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 4256)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4256)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4256
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.152"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            108..905
                     /gene="racE"
                     /locus_tag="PTC28_002276"
     CDS             108..905
                     /gene="racE"
                     /locus_tag="PTC28_002276"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HDK5717513.1"
                     /translation="MDRPIGVMDSGVGGLTVAKEIMRQLPNETIYYLGDVARCPYGPR
                     DQEEVKKFTIEMANYLVQYDIKMLVIACNTATAVALEPLQEQLKIPVIGVIEPGARTA
                     IMTTKNQNVLVLGTEGTIKSEAYRTHIKKINPHVDVYGVACPGFVPLVEEMKYKDPTI
                     TNIVIHQTLKSWRQTEADTVILGCTHYPLLYQPIFDYFGKTKTVISSGLETAREVSAL
                     LTFSHEHAHYTPQPKHRFFANGEVRHMTYIIQEWLKIDAEVERIQLG"
     gene            917..1501
                     /locus_tag="PTC28_002277"
     CDS             917..1501
                     /locus_tag="PTC28_002277"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XTP/dITP diphosphatase"
                     /protein_id="HDK5717514.1"
                     /translation="MADIVIASSNQGKINDFKVIFSEDNVIGINEMIEDFDVEETGTT
                     FEENARLKSEAAAKLLNATVIADDSGLEVAALNGEPGVYSARYAGVQKSDEANIEKVL
                     KGLENEENRAARFVCVISMTTATGETTTFKGTVEGEITLSQIGENGFGYDPIFLIPER
                     QKTMAQLTAEEKSEISHRRKAIDQLKAYIEGEEK"
     gene            1498..2007
                     /locus_tag="PTC28_002278"
     CDS             1498..2007
                     /locus_tag="PTC28_002278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDK5717515.1"
                     /translation="MKKLIILSDNHSETGILYDVYQQHEDADAFFHLGDSEFKYDDTE
                     LSLFHRVKGNMDFYPEFPDNQVTSVGSHRIFFAHGHLYGVNSSRQQLAQAAIAHEAVI
                     ALYGHTHVAKYEQIHGVHVINPGSISQSRSDIEETYAEIILEGTDSFVNFRNRHHDII
                     DKVTFQIEE"
     gene            complement(2198..2263)
                     /locus_tag="PTC28_002279"
     CDS             complement(2198..2263)
                     /locus_tag="PTC28_002279"
                     /inference="COORDINATES: protein motif:HMM:NF033428.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epsilon family phenol-soluble modulin"
                     /protein_id="HDK5717516.1"
                     /translation="MFIIDLIKKVIEFLKGLFGNK"
     gene            complement(2697..2849)
                     /locus_tag="PTC28_002280"
     CDS             complement(2697..2849)
                     /locus_tag="PTC28_002280"
                     /inference="COORDINATES: protein motif:HMM:NF019493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix protein, CopG family"
                     /protein_id="HDK5717517.1"
                     /translation="MIKNTNTRISVTVSKDNRDKLKELAKKENRSMSNMVEHLITSYI
                     ERSSEK"
     gene            2926..3442
                     /locus_tag="PTC28_002281"
                     /pseudo
     CDS             2926..3442
                     /locus_tag="PTC28_002281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500659.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
     gene            3756..4200
                     /locus_tag="PTC28_002282"
                     /pseudo
     CDS             3756..4200
                     /locus_tag="PTC28_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002447504.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         1454 a          689 c          854 g         1259 t
ORIGIN      
        1 ttaaaatggt atctttcagt gtagttttac ggaatgtcag attgttcaac ttcatattag
       61 atgtgataaa ataaaaagca ataatgaaca cgaataggat gaaagagatg gatagaccaa
      121 ttggagttat ggattcaggg gtcgggggac tcacagtagc aaaagaaatt atgagacaac
      181 tccccaatga aaccatttat tatttagggg atgtcgctcg ttgcccatac ggtcctcgag
      241 atcaagagga agttaaaaaa tttacaatcg aaatggccaa ttatttagta cagtatgata
      301 taaaaatgct tgtcatcgca tgtaatacgg caacagctgt tgcattggag cccttacaag
      361 aacagttgaa aattccagtt atcggcgtta ttgaacccgg tgcgagaaca gcaattatga
      421 cgactaaaaa tcaaaatgtc ctcgtacttg gtacagaagg aacgattaaa tcagaagctt
      481 atcgtacgca tattaaaaaa attaacccgc atgtcgatgt atacggtgtg gcatgtccag
      541 ggtttgtacc attagtagaa gagatgaagt acaaagaccc gacgattaca aatatcgtaa
      601 ttcaccaaac attgaaaagt tggcgtcaaa cagaagcaga tacggtcatt ttaggatgta
      661 cacattatcc gttactctat caaccgatat ttgattactt tggaaagacg aaaaccgtta
      721 tttcatcagg gttagaaaca gcgagagagg tcagtgcact ccttacattt agtcatgaac
      781 atgcgcacta cacgcctcag ccaaaacatc gcttttttgc gaacggtgaa gtacgtcata
      841 tgacttatat tattcaagag tggctcaaaa tagacgctga agttgaaaga attcagctag
      901 gataggagag gtagatatgg cagatatcgt cattgcatca tcaaatcaag ggaaaattaa
      961 tgattttaaa gtcatttttt ctgaagacaa tgtcattgga atcaacgaga tgattgaaga
     1021 ttttgatgtt gaagaaacag gcacgacatt tgaagaaaat gcccgcttga aatcagaggc
     1081 agccgcaaag ttactgaatg caacggtgat tgctgatgat agtggcttag aagttgctgc
     1141 attgaacggc gaacccggcg tctattcagc acgttatgca ggggtacaaa aaagtgacga
     1201 agcgaatatt gaaaaagtgc ttaaaggatt agaaaatgaa gagaaccgtg cagcccgttt
     1261 tgtttgtgtg attagtatga cgacagcaac tggagaaaca acaacgttta aaggcacggt
     1321 tgaaggagaa atcacgttaa gtcaaattgg tgaaaatggt tttggatatg atccgatttt
     1381 cttaattcct gaacgccaaa aaacaatggc ccaactgact gccgaagaaa aatcagaaat
     1441 cagtcatcgt cgtaaagcca ttgaccaatt aaaagcatat attgagggtg aggagaaatg
     1501 aaaaagctta tcatcctgag tgacaatcat tcagaaacag gtattttata tgatgtgtac
     1561 caacaacatg aagacgcaga tgcatttttt catttaggtg attcagaatt taaatatgat
     1621 gacacagagt taagtctatt ccatcgtgtg aaagggaata tggactttta tcctgaattt
     1681 cctgacaatc aagtcacatc ggttggtagt catcgtatat ttttcgcgca tggacatctc
     1741 tatggtgtta acagttcacg tcaacaactt gcacaagccg caattgcaca tgaagcagtc
     1801 attgccttgt atggtcacac acatgtcgca aaatatgaac aaattcatgg tgtacatgtg
     1861 atcaatccgg gaagtatttc acaatcacgg agcgacattg aagaaacgta tgctgaaatt
     1921 atactagagg gtacagacag ttttgtgaat ttccgcaatc gtcaccatga catcatcgat
     1981 aaagtgacat ttcaaataga ggaataaatt attgagcagt atagttttgg gattcagacc
     2041 tatcactgta ttgcttttta attgatgaaa acaaagccac cctactaacg attcatatga
     2101 aatgaaacgt agtagggtga cgttagaggt gagaatcgga atgaagatat gtatctccat
     2161 tagtatgatt cagcctcaaa ctcagtcaaa cgatgtctta tttgttaccg aataaacctt
     2221 tcaagaattc gataactttt ttgattaagt cgatgataaa catgtcgatt cacctcctaa
     2281 tgtttgatta atgtcattat aaatcacgta aggcattaat ttttgaaaag tcctcaagtt
     2341 gtttaaattc attcgcaact gtttaaataa tgaaaagtac agacagttgt gcatgccgaa
     2401 atgtccgaaa catgaaaggc ttccgtttat tttagtgttg ttaccatgat gaagacgttg
     2461 aatatcaata aggattcgaa aaattttcgg aaagtggatg attaaatggc ttctatgatc
     2521 cttttagtgg atttaatttt aaaagtcgca atatcgagaa aatagagacg tgttaagatt
     2581 ttattttctt cttcccatta ctgacacgcc tatacctatc aactgatttc tttgatgatg
     2641 catcaagttc ttcatcaatt tactgagtcc gtttcttagt ctagcatcaa ttcacctcat
     2701 ttttctgaac ttctctcgat gtaagatgta atcaaatgct caaccatgtt cgacatactt
     2761 ctgttttctt ttttagcgag ttccttcaac ttgtctcgat tatcttttga aactgtaacg
     2821 ctaattctcg tgttagtatt ctttatcatt ttatcacctc acaaataatg tagcacagtg
     2881 actacacttt taaaaaaata gaaattaatg cttgtatagt acatcgtacc gcaagtgggt
     2941 gatgtggcag tatatagaga cggtatttat aaacaatacg gccggtactg ttgacaatgg
     3001 tggtaatacg aagcagtttt taattttaga gcaaaatttt gatggcaatg caaacatgac
     3061 cgcaacatta agatgaaaca attactatgg atgtacgcat tttatccgcc ctcataacaa
     3121 aagcgagaat accacttcta aaatcactaa taagattaac ccaccattgc acaaagctgt
     3181 aaataactca gctagtaaga ttatcagtgg aagtagaacg ccttatcacc tcaaatggtc
     3241 aaaaggtgca tattttaatg cgaaagtgga tggcctaggt gctacatcag caacacgcta
     3301 tggagagaat cgcgctaatt atcaattcaa tgtaggacaa gccgaatacg tactaggcgc
     3361 gttaatttat gtgtttgaaa tcattgatag ttggtgtcgc atctattgga aaaatcataa
     3421 tgaatggatc tggcatgaat gactaatcgc taaagaagtt ttttaattgt aagttgggac
     3481 tatccctata tagattgctt tttttgtgtg ttaggaaatg acgttttagc ttcttaatgc
     3541 tatacatatt tcggtgataa accatgggac attaaattat ttaattatta tttcaagtga
     3601 acccatggca ataaattact tgtaataaga ttaaactata ttatggttac caaggagatg
     3661 ttattaaaac ttggaagtaa aattaaaact aagggttttt aaattcgaaa ctaagaaaaa
     3721 catttggaac attgttagcg agtgcagttt tattaatgga gatgagtcca ttagcagatg
     3781 ctaaagcaag caatgtgaac agtcagactt ttaaaacagc caatgatagt acggaagcca
     3841 gatatgtaag tgtcgatgga gttaaaataa ataaaaattc tgacttggct attaacccaa
     3901 aagcgcaaaa tcgaattggg actacaaaga ttgttaagac cgctattaaa ttaatcatta
     3961 acaataaaag caaggcggtt gcactagtag aaaagtaggt gaaaaaaagc ggttaatgct
     4021 tttaataaag catacactcc tttagtaaaa gagttaaagc atttgttgaa atggagtgaa
     4081 gtccctgcta atgcagttag agatgctgct attagagcgg gtcgtgcagc tggtttatct
     4141 gagtcacaag tccatactct aggagtgact ttaaaggaag ctatatcttg gttattttaa
     4201 tatgtttagg aggtttatat gttaaaagaa aaagaaagtt taagattact ttatca
//
LOCUS       DANHPA010000151         4244 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.153, whole genome shotgun sequence.
ACCESSION   DANHPA010000151 DANHPA010000000
VERSION     DANHPA010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 4244)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4244)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4244
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.153"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            407..949
                     /locus_tag="PTC28_002283"
     CDS             407..949
                     /locus_tag="PTC28_002283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDK5717518.1"
                     /translation="MNERDIRVQKTNLKLSEVFLTLLEDYWLTKITINQICQRANVHR
                     TTFYKHFKDKYELLYYVSRMALKPYFALALDMRLREPFSSIDKTINQQILKILHTQKG
                     DAKFYQVVTASFYDYFQKELQRYEAELPTQFPFPIEVFSYVYASTICSINQWCSDYDL
                     QLDAYYRDEIYRNLMNFHQK"
     gene            1043..1717
                     /gene="tenA"
                     /locus_tag="PTC28_002284"
     CDS             1043..1717
                     /gene="tenA"
                     /locus_tag="PTC28_002284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017000202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiaminase II"
                     /protein_id="HDK5717519.1"
                     /translation="MKFTERLWQRIQPIWDSYLEHPFVKGIGDGTLDKEKFKHWMKQD
                     YIYLIDYARLFAIGATKATDLEMMTTFGNLVSGTLNTEMQLHRQYAAQFGISEQELES
                     TQPASTTLAYTSYMLNLAQRGGVENVIAAVLTCTWSYHYIGEALNQIEGAAEHPFYGE
                     WIKMYSSPEFTAFKEDVIEMMDRVAEGMSEEALDALEEIVVHTSYYEYMFWDMAEYLE
                     TWPIKG"
     gene            complement(1843..2475)
                     /locus_tag="PTC28_002285"
     CDS             complement(1843..2475)
                     /locus_tag="PTC28_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717520.1"
                     /translation="MKETTRQHPQFQQQFENQPIHRSTYYGKKRRSWVSFILTLIAMV
                     LVAIAAYSMYSETLFKMSFLDENVTFDKLKVIADQLTAQSFIDTSNIEQTLNYVIMGL
                     NFFFILVLVNIIFAILTLIFNRTILKVINWFISIWILLIPIAFLFYINRAAEEITQKL
                     APYIGNVDPATVFSPSNALHNAIIFTAIAMVLYFISLFFRNRRPKIRKQL"
     gene            2636..2971
                     /locus_tag="PTC28_002286"
     CDS             2636..2971
                     /locus_tag="PTC28_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDK5717521.1"
                     /translation="MEVLKTLDAYEAFVANHQIAVVHVSRDNCSVCHAVLPRIQELVA
                     RYEGVALGNVSADDVPEIAGALSIFTVPVDIIFLEGKEMHREGRFIDLERIESQLNTI
                     YEGVKGSNL"
     gene            3094..3996
                     /locus_tag="PTC28_002287"
     CDS             3094..3996
                     /locus_tag="PTC28_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDK5717522.1"
                     /translation="MKRNVMSNLVGRYLSQQRHLKFKTQAEVDVFLEKRRVLNQSKHK
                     QPDQINVKSNLVKDMFDEMQVFRFNFGHHIKNKILYIYGGTFVFQPSVFHWRFMDKLA
                     YETLHEIVLPIYPKAPEFTYRETHEAIEQAYRRLLKETEPENIVIMGDASGGNMALSF
                     AQKLMEQEELPLPGKLYLISPWLDISLSNPEITEQVQKKDPIHNIFSLQSIAKVWADD
                     LERKNPRISPMYGPVRGLPPVYMFGGTCEVFYPDMRKLADYFEAEQQPIHFYEYRDMV
                     TAFPLYPIVESRKVLKQIRKTIDA"
BASE COUNT         1415 a          619 c          904 g         1306 t
ORIGIN      
        1 tggatatttc ggattgatga tttaaaaata tattgagtca gttggggttc atgaaaggcg
       61 atacaagaaa gttcgagaag cgttagcaat ttgcataatc gactgtatta atgagaacaa
      121 agtatgtaaa tcatcaatga gttaaagtaa cttataaatt aattggaaca atcatgttat
      181 ttgtttcgta aaagttattt gaataaattt tagtttctat tgagttgtgt cgaaagttga
      241 agtacaatta ttaataattt aataaaaaac ggtgtaaaat aatattataa gaaaaatttt
      301 gtgttgttgg agggggcatc tccaatgata tgagtgatga atgtttcgaa tttacacctc
      361 attgataagc atcaccatag aagaaaagaa aggtgcgcat gagtttatga atgaaagaga
      421 tatacgtgta cagaaaacga atttgaaatt atcagaagta tttttaacct tattagaaga
      481 ttattggctc accaaaatta ccattaacca aatatgccaa agagcgaacg tccatagaac
      541 gactttttat aaacatttta aagacaaata cgaattactc tattatgtga gtcgaatggc
      601 gttgaaacct tatttcgcct tggcattaga catgcgttta agagaaccat tcagtagtat
      661 cgataagacg attaatcaac aaatattaaa aattttacat acgcaaaaag gcgatgcgaa
      721 gttttatcaa gtagtgaccg caagtttcta cgattatttt caaaaggaac tccagcgcta
      781 tgaagcagaa ttacctactc aattcccttt cccaatagaa gtgtttagtt atgtttatgc
      841 ttccacaatc tgttcgatta atcagtggtg tagtgattat gatctacaat tagatgcgta
      901 ctatcgtgat gaaatttatc gcaatttgat gaattttcac caaaaataaa acgcgtgtgt
      961 atgatgtaga tgattgcata tcgtctgtac acacctttat gatgataagg aaggaaactc
     1021 taatttgaaa ggcgtgttca agatgaaatt tactgaacga ttatggcaac gtattcaacc
     1081 gatatgggac agctacctag agcatccgtt tgtcaaaggg ataggtgacg ggacgttaga
     1141 taaggaaaag tttaaacatt ggatgaagca agactatatt tatttgatag attatgcgcg
     1201 attatttgcg ataggtgcaa caaaagcgac ggatttagaa atgatgacca cttttggcaa
     1261 tttagtctct gggacattga atacagaaat gcaactccat cgtcaatacg ccgcgcaatt
     1321 tggcattagt gaacaagaat tagaatcaac gcaaccagcg agtacgacat tggcttatac
     1381 aagttatatg ttgaatttag cccaacgtgg tggtgtagaa aatgtgattg ccgcagtgct
     1441 cacgtgtaca tggagttatc actatattgg agaggcgtta aatcaaatag aaggcgctgc
     1501 agaacatcct ttttatggtg aatggataaa aatgtacagt tcacccgagt ttacggcgtt
     1561 taaagaagat gtcattgaga tgatggatcg tgtcgctgaa ggaatgtcgg aagaggcatt
     1621 ggacgcatta gaagagattg tcgttcatac gagctattat gaatatatgt tttgggatat
     1681 ggcagagtac ttggagactt ggccaatcaa aggataaatg aagaagtgat gaagattgat
     1741 gtgcttttgg gatggtagta tttaatcatt gaaagacaat caaaaagaag tcgctatgga
     1801 gaatgtggtt gtctctatag tgacttcttt aatttgagtc atttaaagct gtttacggat
     1861 ttttggacgt ctgtttctga aaaatagact gataaaataa agaaccatgg caatagcggt
     1921 aaaaataatc gcattatgaa gtgcattcga tggtgaaaaa acagtagcag gatctacgtt
     1981 gccgatgtaa ggtgcaagtt tttgtgtgat ttcttcagca gcacgattaa tataaaataa
     2041 gaaagcaatt ggaatgagta aaatccatat agagatgaac caattgatga ctttcaaaat
     2101 ggtgcggtta aagatgagtg tcaaaatcgc aaaaataata ttaaccagta ctaaaatgaa
     2161 gaaaaaattg agacccataa ttacataatt gagggtttgt tcaatatttg atgtatcgat
     2221 aaatgattgt gctgtcagtt gatcggcaat cactttaagt ttatcgaatg tgacattttc
     2281 atcaagaaag ctcattttaa ataaagtttc gctatacata ctatatgcag caatcgcaac
     2341 gagtaccata gcgatcagtg ttaaaataaa gctcacccat gaacgtcgct ttttaccata
     2401 atatgtacta cggtggatag gttggttttc aaactgttgt tgaaactggg ggtgttgtcg
     2461 tgtggtctct ttcatatgta acgcctccta tatcattgaa caagctttgt taaaatcttt
     2521 cgctaataca attatgcatt atagtacacc tagaatcata ttcatagtgc ttttttataa
     2581 aatatgatag aactgagata agttcataat gggaaatgga aaaggaggtt gcaagatgga
     2641 agtattaaaa acattggatg cgtatgaagc gtttgttgcc aaccatcaaa tcgcggtcgt
     2701 tcacgtttcg agagacaatt gttctgtatg tcatgccgtt ttaccacgga ttcaagagct
     2761 agttgcacgt tatgaaggtg ttgcgttagg caatgtcagt gcagatgacg tccctgaaat
     2821 tgcaggagcg ctgtcaattt ttactgtccc tgtcgatatc atattccttg aaggtaaaga
     2881 aatgcatcgt gaaggtcgct ttattgattt agaacgaatc gaatcacaac tgaataccat
     2941 ttatgaaggc gtcaaaggct caaatttatg ataatatgaa gatgattttg tgaaaacagt
     3001 tattgcgctc tgagggataa catataaaat aaatatataa gcaaagtttt caagtgatac
     3061 actacgattg ttgagaaaaa gtgagggata caattgaaac gaaatgtcat gagtaattta
     3121 gtggggagat acttgtcgca acaacgtcat ctcaaattta aaacccaagc agaagtggat
     3181 gtgtttttag aaaagagacg tgtgttaaat caatccaagc ataaacagcc agatcaaatt
     3241 aatgtgaaat caaatttagt caaagatatg tttgatgaga tgcaggtgtt tcgctttaat
     3301 tttggtcacc atattaaaaa taaaatctta tatatttatg gaggcacttt cgtctttcaa
     3361 ccctctgttt ttcattggcg gtttatggat aagttggcgt atgaaacgtt acacgaaatt
     3421 gtgttgccga tttatcctaa ggcgcctgaa tttacatatc gtgaaacgca tgaggcgatt
     3481 gagcaagctt atcgtcgctt attaaaagaa acagaacctg aaaatatcgt cattatgggt
     3541 gatgcttcag gtgggaatat ggcgcttagt tttgcgcaaa aattaatgga acaagaagaa
     3601 ttgccactgc ctggaaagct ctatcttatt tcgccttggt tagatatttc gctatccaat
     3661 ccggagatca ctgaacaagt gcagaaaaaa gatccgatcc acaatatttt cagtttacaa
     3721 tcgattgcta aagtgtgggc cgatgatttg gaacgtaaaa acccgcgtat ttcaccgatg
     3781 tatggacctg tgagaggatt accacctgtt tacatgtttg ggggcacatg tgaagtgttt
     3841 tatcctgata tgagaaagtt agcagattat tttgaagcgg aacaacagcc gattcatttt
     3901 tatgagtatc gcgatatggt gacagccttt ccgttgtacc cgattgttga gtcaaggaaa
     3961 gtgttgaagc agattcgaaa aacgattgat gcgtgaaggt ttcaaataaa tcagtatgga
     4021 tatacagatt gcatgaatcg tgttgtgctt tcttaagggc tgatgcttca ggagttttgc
     4081 acgatttttg caatctaacg atatgttatt actcattaat caaaccaata tgcatcatta
     4141 gtttgtgatt aagttttgtt tatcatgacg ctgatgtgaa taggaaaatg actacgtatg
     4201 aaaaaggata ccgacaaatg attgattggg tatgcctttt tatt
//
LOCUS       DANHPA010000152         4035 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.154, whole genome shotgun sequence.
ACCESSION   DANHPA010000152 DANHPA010000000
VERSION     DANHPA010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 4035)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4035)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4035
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.154"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            151..822
                     /locus_tag="PTC28_002288"
     CDS             151..822
                     /locus_tag="PTC28_002288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717523.1"
                     /translation="MMENFASQLQSILHEDEWMLSLTQSDSNGSIYVLFRKGAFAYMP
                     IRISNHKNHSYFSNKTFYTTLEEDVLLSQIRTHLDHSSWYIFRYEDYFTLKMLTKLNM
                     KNLRIYVDNSLGIYDGALMGLLFYQIRYFNRNHKEMNTVSESFQKYLRRLFAAGLLNG
                     YRQANNDLSVYVTQMGKTMLTEYWHVYQERYLTDIKKIDYRYVEVPMDEILYTIDDDH
                     KIIQK"
     gene            1290..1565
                     /gene="rpsP"
                     /locus_tag="PTC28_002289"
     CDS             1290..1565
                     /gene="rpsP"
                     /locus_tag="PTC28_002289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HDK5717524.1"
                     /translation="MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQIGTYNPAA
                     VNAPEVKIDAELALKWLKDGAKPTDTVHNLLSREGILKTFDEQKKAK"
     gene            1888..2391
                     /gene="rimM"
                     /locus_tag="PTC28_002290"
     CDS             1888..2391
                     /gene="rimM"
                     /locus_tag="PTC28_002290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HDK5717525.1"
                     /translation="MKVEVGKIVNTHGIKGEVKVQSHSDFTEIRFQPGEVLQAEYQGQ
                     TLLLTVKSHRMHKGLHMLTFEGYTNINDIEHLKGTHLYQERDHEAIELDEHEFYYSDI
                     IGCTVFDGDRPIGRVTEIFETGANDVWVVKGDKEHLIPYIADVVKEVDIEGRRIVITP
                     LEGLLNE"
     gene            2388..3119
                     /gene="trmD"
                     /locus_tag="PTC28_002291"
     CDS             2388..3119
                     /gene="trmD"
                     /locus_tag="PTC28_002291"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HDK5717526.1"
                     /translation="MKIDYLTLFPEMFEGVLNQSILKRARENEALTTRLINFRDYANN
                     KHNQVDDYPYGGGQGMVLKPEPIFNAMADLEVSDDTRVILMTPQGQPFNQKLAESLAE
                     AEHLVFICGHYEGYDERIREHLVTDEISVGDYVLTGGELPAMVMTDAIVRLIPGVLGN
                     QVSHEDDSFSSGLLEYPQYTRPSDYEGMTVPAVLLSGDHAKIAQWRHEQSLTRTWLKR
                     PDLLDHYPLTDQDQKFIQTLKRTLK"
     gene            3227..3577
                     /gene="rplS"
                     /locus_tag="PTC28_002292"
     CDS             3227..3577
                     /gene="rplS"
                     /locus_tag="PTC28_002292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011303276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HDK5717527.1"
                     /translation="MTNHKLIEAVTKSQLRDDIPSFRPGDTLRVHVRIIEGTRERIQV
                     FEGVVIKRRGGGISETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYL
                     RSLRGKAARIQEIR"
     gene            complement(3845..3982)
                     /locus_tag="PTC28_002293"
     CDS             complement(3845..3982)
                     /locus_tag="PTC28_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-class phenol-soluble modulin"
                     /protein_id="HDK5717528.1"
                     /translation="MGDLFESITNIVTSAIQHDWVNMGAAIVATVQHGVELIAKLFGL
                     G"
BASE COUNT         1291 a          686 c          874 g         1184 t
ORIGIN      
        1 aaacttaaaa caacgtaaaa agggattgct ccaaaagatg tttgtgtaac gtcaatatac
       61 atgtatgtaa tcattagtat taaatgaaga aaaagtgtgt cattgattga gggaatcaat
      121 gtcgtagggt gaagtaaggg ggaatgtctg atgatggaaa attttgcgtc tcaactgcaa
      181 agtattttac atgaggatga gtggatgttg tcgctaacgc agtctgattc caatggttcg
      241 atttatgtgt tgtttcgaaa gggtgctttt gcgtatatgc cgattcgtat cagtaaccat
      301 aaaaatcatt cgtatttctc caataaaact ttttatacga cactggaaga agatgtttta
      361 ctcagtcaaa tcagaacaca cctcgatcat agtagttggt atatatttag atacgaagac
      421 tacttcacac ttaagatgtt aacgaagctc aatatgaaaa atttgaggat ttacgttgat
      481 aactcattgg ggatatacga tggtgcgctg atgggcttgt tgttctatca aattcgatat
      541 tttaatcgaa accataaaga gatgaatacg gtgtcagaat cgtttcaaaa atatttgagg
      601 cggttgtttg cggcaggtct gttgaatggt tatagacaag cgaacaatga tttgtctgta
      661 tatgtgacgc aaatggggaa aaccatgctt acagagtatt ggcacgtcta tcaggagcgt
      721 tatctcactg atataaaaaa gattgattat cggtatgttg aagtgcctat ggatgaaatt
      781 ttatatacaa ttgatgacga ccataagatc atacaaaagt aatgaacgta tgatgtcagt
      841 gtgagataga tgatagtatg agacggtaaa aaaagattgg gatatagaaa ttttttagtc
      901 tcaagccatt catagattaa taacttatta atgtttttaa atcagtcgga aaatgaaggc
      961 gaatgggata caaaaaatgg atgctattgg ttttcttgat ttcataaact tgccctctat
     1021 ttcctgtatt tgatgtcaga ttgcccagaa ggctgacact cctgaggaat cagccataaa
     1081 ggtaatcaaa gccaaaaatc attgagggca agttaagcaa aatcccctgt caatagcctt
     1141 caaaattttt gtatcctatc cccaaatgtg cacagcatga cagaaatttt aaaatggtaa
     1201 agtattttct ctttacaaaa ccatgagttc ctgttattat aatttcttgt agataacaaa
     1261 acttatgaca ttaaaggaga gaattataaa tggcagttaa aattcgttta acacgtttag
     1321 gttcaaaaag aaacccattc tatcgtatcg tagtagcaga cgcgcgttca ccacgtgacg
     1381 gtcgtatcat cgaacaaatc ggtacttaca acccagcagc ggtaaatgcg ccggaagtta
     1441 aaatcgatgc agaattagca cttaaatggt taaaagacgg tgcgaaacca acagatacag
     1501 ttcacaacct tttatcacgt gaaggtattt taaaaacttt tgacgaacag aaaaaagcaa
     1561 aataatgtaa gcatatcaac ggggaaggga gagacacctt tcctatttga ttttaagcga
     1621 taacatttgt tgatatcgcg gtgattcaag cggatagtgc atgacaggat cgataagcgt
     1681 agtcgtgcaa gaagtgactg actttaaaac agtaaatttc aagttttaaa tatcgagtcg
     1741 cctttctgga gttcaagttg agagatgatt tgaaactcta gataaatgga atcaccaatc
     1801 atgaggtgag acgagaagtg acttgatgag aggtgcttcg gtctcatctc ttttttgtat
     1861 aaatagtgat aataggaggc tcccgatatg aaagtagaag tgggtaaaat tgtgaacaca
     1921 cacgggatca aaggcgaagt caaagttcag tctcattcgg actttacaga gattcgcttt
     1981 caacctggcg aagtgttaca agcagaatat caaggtcaaa cgctcctttt aacggtgaag
     2041 tcccatcgta tgcataaagg attacatatg ttaacgtttg aaggctatac gaatattaat
     2101 gacatcgaac atttgaaagg gacacatctc tatcaagagc gtgatcatga agcgattgaa
     2161 ttagatgaac atgaatttta ttactcagac attatcgggt gtacggtgtt tgacggtgat
     2221 cgtccgattg gtcgcgtcac ggaaattttt gaaacaggtg cgaatgatgt gtgggtcgtg
     2281 aaaggtgaca aagaacatct cattccatac attgcagatg ttgtgaaaga agtcgacatt
     2341 gaaggacgtc gtatcgtcat tacaccatta gaagggttgt taaacgaatg aaaatcgatt
     2401 acttaacgct cttcccagaa atgtttgaag gtgtgctcaa tcagtctatt ttaaaacgtg
     2461 caagagaaaa tgaggcatta acgacgcgat tgattaattt tcgtgattat gccaacaata
     2521 aacacaatca agtcgatgat tatccttacg gtggcggaca aggcatggta ttgaagccag
     2581 aaccgatttt taatgcgatg gcagatttgg aagtttcaga tgacacacgc gtgattttga
     2641 tgacgccaca aggacaaccg ttcaatcaaa agttggcgga atctcttgct gaagcggaac
     2701 atctcgtttt tatttgcggc cattatgaag gctatgacga acggattcgc gaacatttag
     2761 ttacagatga aatttctgtc ggcgattatg tgctgacagg gggcgagttg cctgcgatgg
     2821 tcatgacaga tgcgattgtg cgtctcatcc cgggtgtact agggaatcaa gtgtcgcatg
     2881 aagatgattc attttcgagc ggcttattag aatatccaca atatacgcgt cctagtgatt
     2941 atgaggggat gacggtacct gctgtgctat tgtctggaga tcatgcgaaa attgcacaat
     3001 ggcgtcatga gcaatcattg acacgtactt ggttgaaacg tcctgattta ttggaccatt
     3061 atccattgac agaccaagac cagaaattta ttcaaacgtt aaaaagaaca ttgaaataag
     3121 accgaatgta tgctagtata ttttaagtgt ggaaacacga atatcactat gatccgctgc
     3181 tatatattgt cgaggcaaga acataggttg aaggagagaa ttaatcatga caaatcacaa
     3241 attaattgaa gcagtaacaa aatcacaatt acgtgacgat atcccatcat tccgtcctgg
     3301 tgacacttta cgtgtacacg tacgtatcat cgagggtact cgtgaacgta tccaagtatt
     3361 cgaaggtgtt gtcatcaaac gtcgtggtgg cggtatttct gaaacattca ctgttcgtaa
     3421 aatctcatca ggtgtaggtg ttgaacgtac gttcccatta cacacaccaa aaatcgagaa
     3481 aatcgaagtg aaacgtcgcg gtaaagtacg tcgtgcgaaa ctttattact tacgtagcct
     3541 tcgtggtaaa gctgcacgta tccaagaaat tcgttaattc gagtcttaag ggcacgcata
     3601 tcaaacaggg ttgggacaat tcggtgtctc aaccctgttt tattgatgta acaatttaat
     3661 tgcaatgcat tattgttgtt tgagtactgt gatcagggct aggatattta ttcaccctag
     3721 cccccaaatg tgattgaatc agaagttaca gttcatatct ctgatgtgtg tttgcatttt
     3781 atgcttttca ttttccaagt tctccagtgg gcgtgattag gagatttttc tatagattgc
     3841 attcctaacc caaaccgaat aattttgcga ttaattcgac accgtgctgt actgtagcga
     3901 caatcgcagc acccatgttc acccagtcgt gctgaatggc agaagttaca atgtttgtga
     3961 ttgactcaaa caaatcaccc attcgaaaca cctcctttta ttgtataact ttattttaaa
     4021 tcctcttata cataa
//
LOCUS       DANHPA010000153         3942 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.155, whole genome shotgun sequence.
ACCESSION   DANHPA010000153 DANHPA010000000
VERSION     DANHPA010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3942)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3942)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3942
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.155"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..202
                     /locus_tag="PTC28_002294"
     CDS             <1..202
                     /locus_tag="PTC28_002294"
                     /inference="COORDINATES: protein motif:HMM:NF033425.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-1/alpha-2 family phenol-soluble modulin"
                     /protein_id="HDK5717529.1"
                     /translation="NCKMNSSLFTLKHSNKRIRPYPPFNHPHRLKYGYSINKEEVIAM
                     MWADIILGIVKLIKGLIDTFKK"
     gene            589..1893
                     /locus_tag="PTC28_002295"
     CDS             589..1893
                     /locus_tag="PTC28_002295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HDK5717530.1"
                     /translation="MYSKRQPILFYLILFLSTTFIGSLLLYLPWTGQKPISFVDAMYV
                     ATSAFTVTGLTTVDITEQFNVLGHTVIMLLIQIGGMGIVAVSLLTLMISQKKITFQNN
                     QLFKLELNIDETINVVNFAKFIFIFTVVFEALGAMILATVFVPEYGWSKGMFISVFTS
                     ISALNNAGFSLFSDNLVSYASDPVVNLMIAILIIVGGIGYIVLFDLMTTRHLKRLHVH
                     TKVTLFVTFILIVVGTLGFLILEHHHALKGMSFPQQILVSFFQSVSTRTAGFNTIDFS
                     HLAPGTLMLTMILMFIGAGPISAAGGIKVTTFTLVLLYVITSLKGHRYTQVFHRSIDQ
                     KQTQKAVAITLTAMMFIIFIIFWFAVAQPNLQFEAIAFEVISAFGTVGLSTGISTEYD
                     TFAKALIIITMIAGKIGVLTLLGVLHNRTRETFHYAKSHLYL"
     gene            complement(2018..2461)
                     /locus_tag="PTC28_002296"
     CDS             complement(2018..2461)
                     /locus_tag="PTC28_002296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDK5717531.1"
                     /translation="MTKLYPYIAFENTKEALEYYEEVFGATEINRLPVTKEQAGHFGL
                     SQEDATDATMHAEFTIASTQLFASDSFGKAASINGAISLMLDYDVNVGEDAQEIEALY
                     DRVKDHNSITVEMPLAEQFWGGEMGVFTDRYGIRWMIHGQDTTAQ"
     gene            2770..2843
                     /locus_tag="PTC28_002297"
     tRNA            2770..2843
                     /locus_tag="PTC28_002297"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2804..2806,aa:Arg,seq:tct)
     gene            complement(3016..3213)
                     /locus_tag="PTC28_002298"
     CDS             complement(3016..3213)
                     /locus_tag="PTC28_002298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717532.1"
                     /translation="MTDFKKIIQKLLDSDVSGYKIYKDTGISQARISDLRRGVRELGG
                     ISLDTAEKLYNYQKQLEKENE"
BASE COUNT         1167 a          758 c          639 g         1378 t
ORIGIN      
        1 taactgtaaa atgaattcat ctttatttac acttaagcat tcaaataaac gaattaggcc
       61 atatcctcct tttaatcacc cgcatcgttt aaaatatggt tacagtataa ataaagagga
      121 ggtcatcgct atgatgtggg cagatatcat tttaggcatt gttaaattaa ttaaagggtt
      181 aatcgataca ttcaaaaaat aatccgacat gataaaggct gagacattca attgtccagc
      241 ctttttttag tgagtaaaat agtacttcga ttcccataca acaatctggc tcaacatgca
      301 tgatgttcaa atactactct gcacattgac caccttacac cccttatact acctcacccg
      361 cttaccattt tcgtccgtaa acttttcaca tgcgcatcca tgcaaagatt atgcttcaca
      421 ccgtcccttc attatgaagc aatctatatg ttatcactac aaaatacata caaaacctgc
      481 gctcgatgtg acgattcaaa gccgatttga tatacttttg aaaaatagtg atttgttttt
      541 gaaacatatc gtgatattat aacttcaaaa agaaccgagg cgtcaaagat gtatagtaaa
      601 aggcaaccta tcttgtttta tcttatttta tttttaagta ctactttcat tggtagtctt
      661 cttctttact taccttggac tggtcagaag ccgatttctt ttgtcgatgc catgtatgta
      721 gcgacgagtg cttttacagt gaccggcctg acaaccgtgg atattacaga gcagtttaac
      781 gttttaggtc atactgtcat catgcttctc attcaaattg gcggtatggg aattgtagcc
      841 gtgtctctat tgacactaat gatttcacaa aagaagatta catttcaaaa taatcaatta
      901 ttcaagttag aacttaacat cgatgagacc atcaatgttg ttaatttcgc aaaatttatt
      961 ttcattttta cggtagtatt tgaagcgcta ggtgccatga tcctcgcaac agtattcgtg
     1021 cctgagtatg gatggtctaa aggcatgttc attagtgtct ttacgtctat ttcagcactc
     1081 aataatgctg gattttcttt attcagtgac aatttagttt cttatgcgag tgatcccgta
     1141 gtcaatttga tgattgcgat attaattatt gtcggtggga taggctatat cgtgttattc
     1201 gacctaatga caacacgcca tttaaaacga cttcacgttc atacgaaggt cacattattt
     1261 gtcacattta ttttaattgt tgttgggaca ctcggctttt taatattaga acatcatcac
     1321 gcattaaaag ggatgtcttt tccgcaacaa atattagttt catttttcca atccgtcagt
     1381 acacgtacag ccggttttaa cacgatagac ttttcacatc tcgcgccggg tacactcatg
     1441 ttgaccatga ttttaatgtt tattggtgca ggtccgatta gtgcagccgg cgggattaaa
     1501 gtcacaacat ttacacttgt actattatat gtgatcacct cattgaaagg tcaccgctat
     1561 acacaagtct ttcatcgttc gattgatcaa aaacaaacac aaaaagcagt tgcgattaca
     1621 ttaacagcaa tgatgttcat tatctttatt atattttggt ttgcagtggc gcaaccgaac
     1681 ttacaatttg aggcgatcgc tttcgaagtc atttccgcat ttggaacagt gggcttatct
     1741 acaggcattt ctacagaata tgataccttt gcgaaggcac tgattattat tacaatgatt
     1801 gccggtaaaa taggtgtact cacattgtta ggtgttttac ataatcgcac aagagaaact
     1861 ttccattacg cgaaaagcca tttatattta taaaaaaatc aaaacacgcc atcacaccgt
     1921 ttaaaatgtg atgacgtgtt tttagttgat gtgattccta agtatgcacc ggacaatatc
     1981 tcaatgatag cgcactgccc tatgcgacta ctttgaatta ttgtgccgtt gtatcttgac
     2041 cgtgaatcat ccaacgaata ccgtatcgat ctgtaaatac acccatttcc cctccccaga
     2101 actgttctgc taaaggcatt tcgactgtaa tactgttatg atcttttacg cggtcataca
     2161 gcgcttcaat ttcttgagca tcttccccaa cattcacatc atagtctaac atgagtgaaa
     2221 tcgcaccgtt aattgacgcc gctttaccaa atgaatcaga cgcaaacaat tgcgttgaag
     2281 caatagtgaa ttccgcatgc atcgtcgcat cagttgcatc ctcttgtgac agtccaaaat
     2341 gacctgcttg ttcttttgtt actggtaaac gattaatttc agtggctccg aaaacttcct
     2401 cataatattc taacgcttct ttggtatttt caaacgcaat atatggatat aattttgtca
     2461 tagtccctct ccctttcata tcacttactt tattactata taccttttag ttagataaaa
     2521 gtaacaaagt gtatgataag gggccatcac tatcatacta tggattaaag tcttatcaaa
     2581 aaattgaaaa ctaacctaaa atattttaaa ggtatagtga aaagcattgt tcatttttta
     2641 gtgataattt aaattttact atctatttgt tgtaattttt tgtattaggt gttaaatgtt
     2701 taattttttt cttaagctta tgttgattta taacgaccga ttcgctataa ttatccttgt
     2761 gttgaaaatg tcctggtagc tcagctggat agagcaatgg ccttctaagc catcggtcgg
     2821 gggttcgaat ccctcccagg acgctaattg gctatatttc gtttttctac cgttgtatca
     2881 cgtaacttaa aacgttgata tgacggtatt ttgttgtatt tcgttaactt tggttgaatg
     2941 tcgtattttg tactaaacgt ccccgaaatt ataaaaatat agaaaaacac cccacctatt
     3001 gcaggcgggg ttaatttatt cattttcttt ttctaattgt ttttggtagt tgtatagttt
     3061 ttcggcagta tcaagagaaa tacctcccag ttccctgaca cctcttctta aatcggaaat
     3121 acgtgcttgt gatataccgg tatctttata gattttatat ccagatacat cactatctag
     3181 tagtttttga attatctttt tgaaatctgt catgattatc tcaaccattc ataccattta
     3241 tattttttat tgcctatttt ttcatactca ccatttccaa tatatttaat gcccaaatgc
     3301 ttcaaatgta taattcttat tatgcggatt atttcaggga ttaagacaac taatgctaga
     3361 attacaatta ctgtgtatgt gttcatattt gccttacctc ctaatttata gtaatatact
     3421 tattgaaaag ggtgccctgt gtgaatatag ggctgaaatg gaatcatttc tattcttggt
     3481 ttcttgattc gcggtcaaga taaccgagat gccaaagtct aagttgctta attagtgctg
     3541 gtaatcgcaa tactaaagcg aatgccagca tttttattat gtcatccatt ttcgcccccc
     3601 cttttcaaga gtgctgtaag tcatgaacta acttacatat atcatcatac tacccaattg
     3661 gaacatagcc aacccctttt cctcatcttt ttttaatttt tacacaaaaa ataccacacg
     3721 atgtggtaga taaataggca accgtcgcaa cagttgacct taaatgctgc ttaggaattg
     3781 gattattgac ttaataacct tcccatatca gactttatat tatctgctaa tacttgtagt
     3841 tctggaaaat aattatgagc aaaaccaatt attattttat tctttataaa tgtattaagt
     3901 tctctacctt tgagaagagc agcatctatt aaatctacaa gt
//
LOCUS       DANHPA010000154         3877 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.156, whole genome shotgun sequence.
ACCESSION   DANHPA010000154 DANHPA010000000
VERSION     DANHPA010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3877)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3877)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3877
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.156"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            72..977
                     /locus_tag="PTC28_002299"
     CDS             72..977
                     /locus_tag="PTC28_002299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase, lipoprotein e(P4) family"
                     /protein_id="HDK5717533.1"
                     /translation="MNKWSKTTAALLALGIVSSSVSTVTYASGDEAVKTEQAEKSKTA
                     VKDQTAQMLGQQNIMSVAWYQNSAEAKALYAQGYNTAKETLSKKIKNHHGGKKLAIVL
                     DIDETVLDNSPYQAMSALKGKAFPEGWHEWVQSAQAKPVYGAKSFLQYADRHDVEIFY
                     VSDRSHEKDLDATIKNLRNEKLPQADKKHVLLKKEGEKGKAERRDKVRTDYNLVMLFG
                     DNLLDFDEPKQPTAKSREALVKQHEDDFGSKYIIFPNPMYGSWEATLYDNNYGLENNK
                     KIQSREQSLRYFDAKTNKVKSYEMK"
     gene            complement(1127..1324)
                     /locus_tag="PTC28_002300"
     CDS             complement(1127..1324)
                     /locus_tag="PTC28_002300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjzD family protein"
                     /protein_id="HDK5717534.1"
                     /translation="MKYFITLIWAILLVEMINFVLNSLSGGGPLNVVTPLFVAVIMVI
                     ALALLDVATTPPKQSQETNEI"
     gene            1474..2415
                     /locus_tag="PTC28_002301"
     CDS             1474..2415
                     /locus_tag="PTC28_002301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020369794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HDK5717535.1"
                     /translation="MNVGIKGFGAYAPDRVVDNAYFESYLDTSDEWISQMTGIKERRW
                     ADENQDTSDLAYEASIRAIEDAGIDAQDIDMVIVATSTGDHRFPTVANMLQQRLGLGK
                     VASMDQLAACSGFMYGIITARSFVLSGEYQNVLVVGADKLSKITDLNDRSTAILFGDG
                     AGAVIIGEVSENRGILSYELGSDGVGGKYLYQDQETNFIRMNGREVFKFAVRVMGESS
                     QRAVEKANLGPDDINMFIPHQANIRIMESARQRLNLPKEKMSVSVDKYGNTSAASIPL
                     SVKQELENGSIKDDDVVVFVGFGGGLTWGSIVIRWGK"
     gene            2434..3678
                     /gene="fabF"
                     /locus_tag="PTC28_002302"
     CDS             2434..3678
                     /gene="fabF"
                     /locus_tag="PTC28_002302"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HDK5717536.1"
                     /translation="MTKKQRVVVTGLGGLSPIGNDVPTMWENALNGMNGIDKITRIDT
                     EPYQVHIGGELKDFNVEDFIPKKEARKMARFTQYAVVASREALTDSGLTIDETNANRV
                     GVWIGSGIGGMETFEQAYDQLKAKGPRRVSPFFVPMLIPDMASGQVSIDTGAKGPNGA
                     TVTACATATNSIGEAFKIIERGDADVMIAGGTEAPITHMSIAGFSASRALTTNGDIET
                     ACRPFQEGRDGFVMGEGAGILILESLASAQARGAKIYAELVGYGATGDAYHITAPGPE
                     GEGGSRAMEAAIKDAGIQPSDIQYLNAHGTSTSVGDLSEIQAVKNTFGEAAYNLKISS
                     TKSMTGHLLGATGGVEAIFSILSIRDSKIAPTIHANSPDPEIDLDITPNVAVDHDIEY
                     AMSNSLGFGGHNAVLIFKKFSE"
BASE COUNT         1296 a          657 c          840 g         1084 t
ORIGIN      
        1 aagttttaat atagatgtgt gaataacgta ttagtctaat tcgcaaatta tacatagaaa
       61 aggtgaatca tttgaataag tggtcaaaaa caacagcagc acttttagca ctcggtattg
      121 tttcttctag tgtatctact gtgacatatg cgtcaggcga tgaagcagtt aaaactgagc
      181 aagcagagaa aagtaagaca gcagtaaaag atcaaacagc tcaaatgtta ggccaacaaa
      241 acatcatgag tgttgcttgg tatcaaaact cagcagaagc aaaagcatta tatgcacaag
      301 gctataacac agcaaaagaa acattaagta agaaaattaa aaaccatcat ggtggtaaaa
      361 agttagcaat cgttcttgat attgatgaga ccgttcttga taattctcca tatcaagcca
      421 tgagtgcatt aaaaggtaaa gcttttccag aaggttggca tgaatgggtt caatctgcac
      481 aagctaaacc tgtttatggg gctaagtcgt ttttacaata tgcagaccgc cacgatgttg
      541 aaatttttta tgtttcagac cgttcgcatg aaaaggactt agacgcgaca attaaaaatt
      601 taagaaatga aaagttacca caagctgaca agaagcatgt gttattgaaa aaagaaggag
      661 aaaaagggaa agctgaacgc cgtgataaag tacgtacaga ttacaattta gtgatgttat
      721 ttggcgacaa cttacttgac tttgatgagc ctaaacaacc gacagcgaaa tcacgtgaag
      781 ctttagttaa gcaacatgaa gatgatttcg gtagcaagta catcattttc cctaacccaa
      841 tgtatggtag ctgggaagcg acattatacg acaataacta cggtttagaa aacaataaaa
      901 aaattcaaag tcgtgaacag tcattacgtt actttgatgc gaaaacaaat aaagtaaaat
      961 catatgaaat gaagtaaatt ttaccaaaat ctaaaaaact gatgaggcat gattgaagtc
     1021 tcgtcagttt tttacatatg ggcaagcgct ttgaattacg taaaaaggct agaaattgaa
     1081 caaaacttct gttcaacatc caaccttttc aacattgcat actatgtcaa atctcattcg
     1141 tttcttgtga ttgtttgggt ggtgtcgttg caacatctaa caatgcaagt gcaatcacca
     1201 taatgacagc gacaaacagt ggtgtcacaa cattgagtgg accgccacca ctcaagctat
     1261 ttaaaacgaa attaatcatt tctacaagta aaatagccca aatcaatgtg atgaagtatt
     1321 tcattgtata ttgcctccat ttaattgata attctattat agtatgcttc agatgttttg
     1381 tataccatcc ctagcatgtc acttgtcttt ttttgtgaca atatgttaaa ttaatacctg
     1441 gtattaaaaa acttaaaaga aggtgttcaa accatgaatg taggtattaa aggatttggc
     1501 gcatatgccc cagatcgtgt tgtcgataat gcatattttg aatcatacct agatacatct
     1561 gacgaatgga tttcacaaat gactgggatt aaagaacgta gatgggcaga tgagaaccaa
     1621 gatacatctg atttagcgta tgaggcaagt attcgtgcga ttgaagatgc aggtatcgat
     1681 gcacaagaca tagacatggt tattgttgca acatctactg gagatcatcg ttttccaaca
     1741 gtggcaaata tgttacaaca gcgactagga cttggtaaag ttgcatctat ggatcaatta
     1801 gccgcatgtt ctggatttat gtatggtatc attacagcgc gttcatttgt attatcaggt
     1861 gaatatcaaa atgtgctcgt agtgggtgca gataaacttt caaaaattac agatttaaat
     1921 gaccgctcaa ctgctatttt gtttggagac ggtgccggtg cagtgattat tggcgaagta
     1981 tctgaaaatc gtggtattct gagctatgag ttaggttcag atggtgtggg tggcaaatac
     2041 ctttaccaag atcaagaaac aaactttatt cgtatgaatg gccgcgaagt tttcaaattt
     2101 gcggtacgtg tgatgggtga atcgtcacaa cgtgcagttg aaaaagcgaa tttaggtcca
     2161 gatgatatta atatgtttat tccacatcaa gcaaatattc gtattatgga gtcagcacgt
     2221 caacgattaa atttaccaaa agaaaaaatg agcgtctcag tagataaata tggtaacaca
     2281 tcagcggctt ctatcccgct cagtgtcaaa caagaattgg aaaatggaag catcaaagac
     2341 gatgatgttg ttgtatttgt aggcttcggt ggaggactga cttggggctc aatcgtcatc
     2401 agatggggta aataaataga ggaggaaatg aatatgacaa aaaaacaacg tgttgtagtg
     2461 acaggtcttg gtggcttatc accaatcgga aatgatgtcc cgacaatgtg ggaaaatgca
     2521 ttaaatggta tgaatggtat cgataaaatt acaagaatcg atacagaacc ttatcaagtg
     2581 cacattggtg gagaactgaa agattttaat gtagaagact ttattcctaa aaaagaagca
     2641 cgtaaaatgg cgcgttttac acaatatgcc gttgtagcat cacgtgaagc attaacagat
     2701 tcaggactta ccattgacga aacgaatgcg aatcgtgtcg gtgtttggat cggttcaggc
     2761 atcgggggta tggaaacatt tgaacaagca tatgatcaat tgaaagcgaa aggaccacgt
     2821 cgcgttagtc ctttcttcgt accgatgtta attccagaca tggcatcagg acaagtgtca
     2881 atcgatacag gtgcgaaagg gccaaacggt gcaacagtta cagcatgtgc gaccgcaacg
     2941 aactctattg gtgaagcatt taaaattatc gaacgtggcg atgcagacgt gatgattgca
     3001 gggggaacag aagccccaat cacacatatg tctattgcag gattcagtgc gagccgtgca
     3061 ttaacaacaa acggtgatat cgaaacagca tgtcgtccat tccaagaagg tcgtgacggc
     3121 tttgtgatgg gtgaaggtgc agggatttta attttagaat cattagcatc tgcacaagca
     3181 cgtggcgcga aaatttatgc tgagcttgtc ggctacggtg caacaggtga tgcgtatcat
     3241 attactgcgc caggtccaga aggtgaaggg ggttctcgtg caatggaagc tgcgattaaa
     3301 gatgcaggta tccaaccgag cgacatccag tacctcaatg ctcacggtac aagtacatca
     3361 gtaggcgact tatctgaaat tcaagcggtt aaaaacacgt ttggtgaagc agcgtataac
     3421 ctcaaaatta gttctacaaa atcaatgacg ggtcacttat taggtgcaac aggcggtgtc
     3481 gaagcgattt tctctatttt atctatccgt gatagtaaaa tcgcaccgac tatccatgca
     3541 aattcaccag atccagaaat tgacttagat attacaccaa atgttgcggt agatcacgac
     3601 atcgaatatg cgatgagcaa cagtttaggt tttggtggac acaatgcagt actcattttc
     3661 aagaaattta gtgaatagat tgatggaact tagcgatgat actctctatg atgatagaag
     3721 gtgtcatcgc tttattcatg tatataactt ttcaaaaaag acgaggtcat ttcaaaattg
     3781 cctcgtcttt ttgggctata ccatgattaa agttattttt atttctttga atagttatac
     3841 agcaatgttt gcattagaag tacatttgga tggttac
//
LOCUS       DANHPA010000155         3855 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.157, whole genome shotgun sequence.
ACCESSION   DANHPA010000155 DANHPA010000000
VERSION     DANHPA010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3855)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3855)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3855
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.157"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(82..1314)
                     /locus_tag="PTC28_002303"
     CDS             complement(82..1314)
                     /locus_tag="PTC28_002303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HDK5717537.1"
                     /translation="MNNMKRLFRYILRSSKYIDFPLLITYLALCFIGLTMVYSASMVA
                     ATRGTLTGGIPVAGTYFYTRQLIYVIVGFFIVFFMAYIMDVRILKQRNIQLGMMAIML
                     GLLFATLLFGSEINGSRSWLKLGFMNLQASELLKIAIILYVPYIIERKHYEIQRQPIV
                     ILWPIAFVGFCLGLVLLQKDVGQTLLIGGIFFSIIVYSGIGVKNLIKIGSYAMLALIV
                     VILIIVIFRINILPSYLTARFSALENPFNFESGIGYHLSNSLLAIGNGGLFGRGLGNS
                     IMKLGYLPEPHTDFIFAIISEELGFVGAFIVLGMIFFIVYRAFELASRTASYFYKLVC
                     VGIASYIALQTFVNLGGISGLIPLTGVPLPFISFGGSSMLSLSIAMGLLLIIAKQIKY
                     DDAKQRYMKKQQAKMRRY"
     gene            complement(1385..1660)
                     /locus_tag="PTC28_002304"
     CDS             complement(1385..1660)
                     /locus_tag="PTC28_002304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlaN family protein"
                     /protein_id="HDK5717538.1"
                     /translation="MSKQQQMSNAAYDQLNKDADRILQLIKVQIDNLTLPQCPLYEEV
                     LDTQMYGLQKEVDFAVNLGLVSEEDGKKLMLRLEKELSKLHEAFTRV"
     gene            1797..2279
                     /locus_tag="PTC28_002305"
     CDS             1797..2279
                     /locus_tag="PTC28_002305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717539.1"
                     /translation="MIQIKGDVKFPITLDSTTWIFDDRKISLEDLEKGIFEGQKPIEF
                     EDNREWNRAILEGQTNPPTLNSEIDYKKRAVLQGSFAINMTPFFKNAEPYENVTTIRL
                     SNDEAHIDVPFDLLPYLFFQFAKGGKRLYHDDGVDSFVYTLEDGYDYVFEHVTHIEVF
                     "
     gene            2280..2483
                     /locus_tag="PTC28_002306"
     CDS             2280..2483
                     /locus_tag="PTC28_002306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2197 domain-containing protein"
                     /protein_id="HDK5717540.1"
                     /translation="MRKVTCIICDTEVLLDENTRLAKRLKNNPIKTFMCDECKSRLDT
                     PKQRPPILTTHDKKDATSYHDEA"
     gene            complement(2607..3734)
                     /locus_tag="PTC28_002307"
     CDS             complement(2607..3734)
                     /locus_tag="PTC28_002307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent flavin oxidoreductase"
                     /protein_id="HDK5717541.1"
                     /translation="MNTKYEKLFETLELPNGTTLRNRFVLAPMTHTLSNDDGTASDVE
                     LDYMESRSKDVGLAITAATYVNEEGKAFPGEPSISKEEDLEGLSELARRMKKGGAKAI
                     VQIHHGGAKSLPEWVPNGDVKAPSAVSTVGFGHTEPHDAREITAEEIEQMIKDFGKAT
                     SLAIKAGFDGVEIHGANHYIIEQFQSPYYNRRDDKWKELFSLPNAVADEVLRVARKEG
                     PQDFIVGYRFSPEEAEDPGITMDNTEKLIKHLIEKPLDYLHVSLMNVHSVVRRGEHEG
                     KKRVDLILDWMEDRMPLIAIGSVFSADDALSAIETGVPLIAMGRGLLFDENLISKTKE
                     GREDEIISYFDPEKADHHNMPYLLWKAFADKWYPYPEKPNA"
BASE COUNT         1225 a          744 c          670 g         1216 t
ORIGIN      
        1 aaaaagctaa cttctatata aagtatagaa attagctttt ggtgcatcac aagtatccgt
       61 catacacacg ccatctattt gttaataacg tctcatttta gcttgttgtt ttttcatgta
      121 gcgttgtttc gcatcatcat atttaatttg cttagcaata atgagtagta gtcccatcgc
      181 gatacttaaa cttaacatcg atgaaccccc aaaactaata aatgggagcg gtacacctgt
      241 taatgggatt aagcctgaaa taccacctaa attgacaaaa gtttgtaatg caatataact
      301 cgcaatacca acacatacca atttgtaaaa atatgacgct gtacgggaag ccaattcgaa
      361 agcacgatag acgataaaga aaatcatacc taacacgatg aaagccccca caaaaccaag
      421 ctcttcacta ataatcgcaa aaatgaagtc tgtatgcggt tcaggtaagt atccgagttt
      481 cataatactg ttgcccaatc cacgtccaaa cagtcctcca ttaccgatag cgagtaacga
      541 attcgataaa tggtaaccaa taccagactc aaaattaaat gggttttcca atgcgctaaa
      601 acgtgctgtt aaatatgatg gtaaaatatt aatgcggaaa atgacaataa ttaaaattac
      661 gacaattaac gctaacatcg cgtaagagcc gattttaatc aagtttttga caccgatacc
      721 agagtaaacg ataatactaa aaaatatacc gcctatcaac aatgtttgac cgacgtcttt
      781 ttgtagtaag acaaggccaa gacaaaaacc gacaaatgca atcggccaca aaataacgat
      841 cggttgtcgc tgaatttcgt aatgctttct ttctattata tatggtacgt agagtatgat
      901 agcaattttt aaaagttcag aagcttgcaa gttcataaat cctaacttta accagcttcg
      961 tgaaccgtta atctcactac caaataatag tgtcgcaaaa agcaaaccga gcatgatcgc
     1021 catcatccca agttgaatat tacgctgctt taaaatgcgt acgtccataa tatacgccat
     1081 aaaaaacaca ataaaaaaac caacgatgac gtatatgagt tgtctcgtat aaaaatatgt
     1141 acctgcaaca ggaataccac ctgtgagtgt gcctcttgtt gctgcgacca tacttgcact
     1201 ataaaccatg gtcaaaccaa taaagcagag tgcaagatat gtgattaata atggaaaatc
     1261 gatatattta gaagatctca aaatataccg aaatagtctt ttcatattat tcatatgtgt
     1321 caatcatcca attctcgcac ttagacgtcg aaaaaacgtg ctattgtatg ttagatagca
     1381 actattaaac gcgagtaaat gcttcgtgta attttgataa ttctttctct aaacgtaaca
     1441 ttaacttttt gccatcttct tcgctaacaa gtccaagatt tactgcaaag tcgacttctt
     1501 tttgtaaacc atacatctgt gtatctaaaa cttcctcgta taaagggcat tgtggtagtg
     1561 taagattatc tatttgaact ttaatgagtt gaagaatacg atctgcgtct ttattcagtt
     1621 ggtcatatgc agcattgctc atttgttgtt gcttgctcat gacatagtcc ccctattaat
     1681 tttcttctta tgtaaaaagt ttatctcatc gactgttaaa aagcaagtaa atttggcata
     1741 cgctctggga caagtatgtt aaaataaacg tagctaaact gagggagtgc atacaaatga
     1801 ttcaaatcaa aggtgacgtt aaatttccaa ttacactcga tagtacgact tggatttttg
     1861 acgatcgaaa aatttcactt gaggatttag aaaaaggtat ttttgaagga caaaagccga
     1921 ttgaatttga ggacaacaga gaatggaatc gtgccatatt agaaggtcaa acgaatccac
     1981 ctactttaaa ttctgaaatt gattataaaa aacgtgctgt attacaaggt tcttttgcga
     2041 ttaatatgac accttttttc aaaaatgcag aaccatatga aaacgtgaca acgatcaggc
     2101 tgtctaacga tgaagcgcat atcgatgtgc cattcgacct gttgccttat cttttcttcc
     2161 aattcgctaa aggtggcaaa cgtctctatc acgatgatgg tgtagacagt tttgtttata
     2221 cgttagaaga cggttatgac tatgttttcg agcacgttac acatatagag gtgttctaaa
     2281 tgcgtaaagt cacttgcatc atatgtgaca ctgaagtttt gttagatgaa aatacacgat
     2341 tagcgaaacg tttgaaaaat aatcccatta aaacgtttat gtgcgatgaa tgtaagagtc
     2401 gtcttgatac accgaagcaa cgtccaccta tcttgactac ccatgataaa aaggacgcga
     2461 cttcttatca tgatgaagct taatatgaac cggggcatgg acttaagatg ccccggtttt
     2521 tgtttgttaa gcataagaaa aaggcgaatg gcttgaccgt ttaagacgtg gaagcgattc
     2581 gcccttttta tatcgtttaa ctcagattat gcatttggtt tttctggata tggataccat
     2641 ttatcagcaa atgctttcca taataaatat ggcatgttgt gatgatctgc tttttctggg
     2701 tcgaagtaag aaatgatttc gtcttctcta ccttcttttg ttttactaat aagattttca
     2761 tcaaataata aaccacggcc catcgcaatt aaaggtacgc ctgtttcgat ggcacttaat
     2821 gcgtcatctg ctgagaatac tgaaccgatt gcgatgagtg gcatacggtc ttccatccaa
     2881 tcaagaatta aatctacacg ttttttacct tcgtgttcac cacgacgtac aacggaatgc
     2941 acattcatta atgacacgtg taaataatca agtggttttt cgattaagtg tttgattaat
     3001 ttttcagtgt tatccattgt aatacctgga tcttctgctt cttcaggtga gaaacggtaa
     3061 ccgacaataa agtcttgtgg tccttctttt ctggctacac gtaacacttc atctgccacc
     3121 gcatttggta aagagaataa ttctttccat ttgtcatcgc ggcggttgta gtatggtgat
     3181 tgaaattgtt cgataatgta gtggtttgcc ccgtgaattt cgacaccatc aaatccagct
     3241 ttaattgcaa gtgatgtcgc tttaccgaaa tctttaatca tttgttcaat ttcttcagct
     3301 gtaatttcac gcgcatcatg tggttctgta tgaccgaaac ctacagttga aacagcactt
     3361 ggcgctttaa cgtcaccatt aggtacccat tcaggtaagc ttttcgcacc accgtgatgg
     3421 atttgaacga ttgcttttgc gccacctttt ttcattcttc ttgcaagttc acttaaacct
     3481 tcaagatctt cctctttaga aatagatggt tcacctggaa atgctttccc ctcttcattc
     3541 acatatgttg ctgctgtaat cgctaaaccg acatcttttg agcgagattc catatagtct
     3601 aattccacat ctgaggcagt cccatcgtca ttagataatg tatgtgtcat aggtgctaaa
     3661 acgaaacggt ttcttaatgt tgttccgttg ggtaattcaa gtgtttcaaa taatttttca
     3721 tactttgtgt tcactgtatt tccctcctat tcattaactg ccttcatttt aatacatcgc
     3781 ctgaggaaaa caaaataatt ggcttaaaaa taaaattact ttgaaataag actaattaat
     3841 atacctttta aattc
//
LOCUS       DANHPA010000156         3846 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.158, whole genome shotgun sequence.
ACCESSION   DANHPA010000156 DANHPA010000000
VERSION     DANHPA010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3846)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3846)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3846
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.158"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..414
                     /locus_tag="PTC28_002308"
     CDS             <1..414
                     /locus_tag="PTC28_002308"
                     /inference="COORDINATES: protein motif:HMM:NF013579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDK5717542.1"
                     /translation="PKDSVLLSFKLTIGRVKLTNKELTTNEAIAHFYSSNINKLYTYL
                     YLKNFEYGYLGNTSSIATAVNSKIIKKMPILVPEQKVLKRFINIAEPFMNRINIIQNE
                     NIELNQLRDTLLPKLMSGEIEIPDDIEVNEDELSI"
     gene            398..3520
                     /locus_tag="PTC28_002309"
     CDS             398..3520
                     /locus_tag="PTC28_002309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002505894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HDK5717543.1"
                     /translation="MSFQFSEDDLEQVALKWFESLGYSVKNGRDSSDNGIMNERESDK
                     DVVLDDRLEAALRRINPELNNSAIEQAMREISIEKSPSLLENNRSFHEMITNGIEVEH
                     YNDDGETINDLVYVFDFNNPGNNDFLAVNQLTVVNGDYKKRPDIVLFINGLPVVVIEL
                     KNSTNESVGIEDGYHQLETYKMRIPQLFNHNAVLVTSDGVNTKAGSLTADYDRFMTWR
                     TKDGKTEYSSTFRSLDILIHGMLNKEVLLDLIRHFVLFQDDGKGHIVKILAAYHQYYA
                     VNKAVDRAMEATSEHGDGKGGVIWHTQGSGKSLTMVFFSGKLIQKLNNPTLVVVTDRN
                     DLDNQLYGTFVKSKGRSGKGLLRQTPKQAESRKELKELLSVESGGIVFTTMQKFEPEE
                     GQATMDALTERKNVVVMADEAHRTQYGFKATYDEKGEGIKYGYAKYLRDALPNASFVG
                     FTGTPVSSTDKNTQMVFGNYIDVYDMTQAVEDGSTVKIYYESRIIPLNLPTDLDIDEA
                     YDAITSDQEEDTKSRLKSKWSRIEALSGAEQRIHALATDIINHFETRQKAMKGKGMIV
                     TMSRRIAVDLYDEIVRLKPEWHSDDDDKGVIKVVMTGSSSDPQNFQKHIGPKKRRNLL
                     ENRMKDVNDELQLVIVRDMWLTGFDVPSMHTMYIDKPMKGHNLMQAIARVNRVFKDKP
                     GGLIVDYVGIAESLKEALKEYTDSDREQTGIDTDKALEVMLMKYDIIQDMLYNHDYSD
                     FESEDQLNRYNAISNTMDYIIGLGEKERERFIKTVTELSKAFALCATEEAAQELNSEI
                     AFLKAVKSGLVKLLAPPTDASERKKTPAEIEAEINQLISKSVMTEEVVDIYQTLGIEN
                     PDISILSDEFLKDVEGLQQKNVAVELLNKLLKGQVKSLMKTNTTVSKRFSEMLSKSIQ
                     KYNNRSIEASKVIEELIQMAKEINQEKQRGKDLGLSTEEIAFYDALASHETAKEAMGD
                     KELRAIAHELTKTVKNNMSVDWSKRESAKAKMRVQVRRLLKKYGYPPDLQKMAVEQVV
                     EQAELMASQQ"
BASE COUNT         1452 a          527 c          757 g         1110 t
ORIGIN      
        1 cctaaagatt ctgttttatt aagttttaaa cttacaattg gaagagtaaa acttactaat
       61 aaagagttaa ctacaaatga agcaattgca cacttttatt cgagtaatat aaataaacta
      121 tatacctatc tatatttaaa gaactttgaa tatggatatt tagggaatac atcttctata
      181 gcaacagcag ttaactcaaa aataattaaa aaaatgccaa tattagtacc agagcaaaaa
      241 gtactaaaaa ggtttataaa tattgcagaa ccttttatga acagaattaa tataatacaa
      301 aacgaaaata tagagttaaa tcaattaaga gacacattat tgccaaaatt aatgtcaggt
      361 gaaattgaga tacctgatga catcgaggtg aatgaagatg agctttcaat ttagtgaaga
      421 tgatttagaa caggttgcat tgaaatggtt tgagagtctt ggctattctg ttaagaatgg
      481 tcgagatagt agtgacaatg ggattatgaa tgaacgtgag agcgacaaag atgttgtgct
      541 tgatgatcgt ttggaagcgg ctttgagacg tattaatcct gaactaaata atagtgcaat
      601 tgaacaggct atgcgtgaaa tttctattga gaagtctcct agtttattag agaataaccg
      661 ttcttttcat gaaatgatta caaatggtat tgaggttgaa cactataatg atgacggtga
      721 gacgattaat gatttggtat atgtattcga ctttaataac ccgggaaata atgatttctt
      781 agcggttaat caattaactg ttgtaaatgg agattataaa aaaagaccag atattgtgtt
      841 attcataaat ggattaccgg tagtggtaat tgaactgaaa aattctacaa atgaatctgt
      901 tggtattgaa gatggatacc atcagttaga aacttataaa atgagaattc cacaattatt
      961 taatcataat gcagtattag tgacgagtga tggtgttaat acaaaagctg gttctttaac
     1021 tgctgattat gatcgtttta tgacttggcg tacaaaagat ggaaaaactg aatattcatc
     1081 aacgtttcgt agtttagata tattgattca cggtatgtta aataaagaag tactattaga
     1141 tttaatacgt cattttgttt tgttccaaga tgacggtaaa ggacatatag ttaaaatatt
     1201 agctgcatac caccaatact atgcagtgaa taaagctgtt gatcgtgcta tggaagcaac
     1261 atctgaacat ggagatggca agggtggcgt tatttggcac acacaaggtt ctggtaagag
     1321 tttgacaatg gtcttcttct caggaaagtt aattcaaaaa ttaaataatc caacattagt
     1381 ggtcgtaaca gaccgtaatg acttagacaa tcaattgtat ggtacttttg ttaagtccaa
     1441 aggacgctca ggtaaaggat tattaagaca gacacctaaa caagctgaat cacgaaaaga
     1501 attaaaagaa ctattatcag tagaatcagg tggtatcgta tttacaacta tgcagaaatt
     1561 cgaacctgaa gaaggacaag cgacaatgga tgctttaaca gaacgtaaaa atgtagttgt
     1621 tatggcagac gaagcacacc gcacacaata tggtttcaaa gcaacttacg atgaaaaagg
     1681 tgaaggtatt aaatatggtt atgcaaaata tttaagagat gctttaccta acgcttcatt
     1741 tgttggcttt actggaacac ctgtatcttc aacagataaa aatacacaaa tggtatttgg
     1801 taattatatt gatgtatatg atatgactca ggctgttgaa gatggaagta cggttaaaat
     1861 ttattatgaa agtcgtatta tcccattaaa tttaccaacc gatttagata ttgatgaagc
     1921 gtatgatgcc attacttctg atcaagaaga agatactaaa tctcgattga aatctaaatg
     1981 gtcacgtata gaagcactat ctggtgcaga gcaacgtata catgctttag cgactgatat
     2041 cattaatcac tttgaaacaa gacagaaggc tatgaagggt aaaggtatga ttgtcacaat
     2101 gagtcgtcgt attgcagtcg atttatatga tgaaattgta agacttaaac ccgaatggca
     2161 ttcagatgat gatgacaaag gtgttatcaa agtcgttatg acaggttcat ctagcgatcc
     2221 gcaaaacttc caaaaacata taggtccgaa aaagcgaaga aaccttctag agaatcgtat
     2281 gaaagatgtt aatgatgaac tgcaactcgt aattgtgcga gacatgtggt taacaggatt
     2341 tgatgtacct tcaatgcata caatgtacat agataaaccg atgaaaggtc ataatttaat
     2401 gcaagctatt gcgcgtgtta atagagtatt taaagataaa ccaggcggct taattgttga
     2461 ttatgtaggt attgctgaaa gtctgaagga agcattaaaa gagtatacgg actctgatag
     2521 agaacaaaca ggcatagaca cagataaagc tcttgaagtt atgttaatga aatacgatat
     2581 catacaagat atgctgtata atcacgacta ttctgatttt gagtcagaag atcaattaaa
     2641 tcgctataat gctatctcaa atacgatgga ttatatcatt ggattaggtg aaaaagaaag
     2701 agagcgattt ataaaaactg tgacagagct ttctaaggca tttgcattat gtgcaacaga
     2761 ggaagcagca caagaactta atagcgaaat tgcattttta aaagctgtaa aatcaggcct
     2821 tgttaaattg ttagctccac ctactgatgc aagtgagcgt aaaaagacac ctgctgaaat
     2881 agaagcagaa ataaatcaat taatttcaaa atcagtgatg actgaagaag ttgtagatat
     2941 ttatcaaaca cttggaatag aaaatccaga tatctcaata ttgtcagatg aattcttaaa
     3001 agatgtagaa ggacttcaac aaaaaaatgt agcggttgaa ttgttgaaca aattgcttaa
     3061 aggacaagtt aaatcattga tgaaaacaaa tactactgta tccaaaaggt tttctgagat
     3121 gctaagcaaa tcaatacaaa aatacaacaa tcgttctata gaagcttcaa aagtcataga
     3181 agaattgatt caaatggcga aagaaataaa tcaagaaaaa caacgaggaa aagacttagg
     3241 tctgagcacg gaggaaattg ctttttatga tgcattagcc tctcatgaaa ctgcaaaaga
     3301 agcaatgggg gataaagaat tacgagctat tgcacatgaa ttaacaaaaa cggtcaagaa
     3361 taatatgagt gtagactggt caaaacgtga gagcgcaaag gctaaaatga gagtccaagt
     3421 aagacgacta ttaaagaaat atggttaccc acctgatctt caaaaaatgg ctgtagaaca
     3481 agttgtagaa caagcagaac taatggccag ccaacaataa aaataaatta atcatagcat
     3541 ccttcaccgc aaagtgaggg atgctatgat tttatataaa catactaaga ttagctgtga
     3601 agaaatttat gacgatagat ttcttcacag ctatttttta tagttgtaga gagaagtaga
     3661 tcgcgcagct ccgtggatct ttgaatccgt aaaataaact gatcagcttt actccctttt
     3721 tgaaattcga ttgaagtgtg ttgggttcta gaaaccgtgt ataggaaaat gaaatgaaaa
     3781 aggctaagta aagttaaaga tttctcaatt caataaagaa aggcatgatt tttatcaatt
     3841 gtttag
//
LOCUS       DANHPA010000157         3785 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.160, whole genome shotgun sequence.
ACCESSION   DANHPA010000157 DANHPA010000000
VERSION     DANHPA010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3785)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3785)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3785
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.160"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..1107
                     /locus_tag="PTC28_002310"
     CDS             <1..1107
                     /locus_tag="PTC28_002310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002493196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid recombination protein"
                     /protein_id="HDK5717544.1"
                     /translation="KKNFNNLIDEKIEQNYTGKRKIRTDAVKHIDGLITSDKEFFDNQ
                     TPEDTKQFFEHAKEFLEQEYGKDNLLYATVHMDEKTPHMHYGVVPITDDGRLSAKEVV
                     GNKKALTEFQDRFNEYVNQRGYDLERGQSRQVTNAKHEQISQYKQKTEYHKQEYERES
                     QKSDYIKQKNDKLMQEYQKSLNTLKKPINVPYEQETEKVGGLFNKETQETGNIVISQE
                     DFNAFQKQIEAAQSISDDYERIKSGDKLNEMEKEYKEVRDTFLKTYEMYQGLQQENRE
                     LKEENKEIKDDLDKTNKLLYHCKIAISKLLEELNRMFERREFVDKIRGLGKDNDQVLN
                     VMRIIDKENNPQHYQEQKQEEQKSEPKRDRGMSR"
     gene            1632..2576
                     /locus_tag="PTC28_002311"
     CDS             1632..2576
                     /locus_tag="PTC28_002311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017722130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HDK5717545.1"
                     /translation="MSKKEQRIFSNQSIGRENSNFVKTGYSNSRLSGQTLGKSQPALS
                     FDAMTIVGNLNKTNAKKLSDFMSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADT
                     WDRRNMRVEFNPNKLTHEEMIWLKQNIIDYMEDDGFTRLDLAFDFEDDLSDYYAMTDK
                     AVKKTVFYGRNGKPETKYFGVRDSDRFIRIYNKKQERKDNADVEVVSEHLWRVEVELK
                     RDMVDYWNDCFNDLHILKPAWATLEKINEQAMVYTLLHEESMWGKLSKNTKTKFKKLI
                     REISPIDLTELMKSTLKANEKQLQKQIDFWQREFRFWK"
     gene            2706..3353
                     /locus_tag="PTC28_002312"
     CDS             2706..3353
                     /locus_tag="PTC28_002312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002331392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type A-7 chloramphenicol O-acetyltransferase"
                     /protein_id="HDK5717546.1"
                     /translation="MTFNIIELENWDRKEYFEHYFNQQTTYSITKEIDITLFKDMIKK
                     KGYEIYPSLIYAIMEVVNKNKVFRTGINSENKLGYWDKLNPLYTVFNKQTEKFTNIWT
                     ESDKNFISFYNNYKNDLLEYKDKEEMFPKKPIPENTIPISMIPWIDFSSFNLNIGNNS
                     SFLLPIITIGKFYSENNKIYIPVALQLHHSVCDGYHASLFMNEFQDIIHRVDDWI"
     gene            3633..>3785
                     /locus_tag="PTC28_002313"
     CDS             3633..>3785
                     /locus_tag="PTC28_002313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010889940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid recombination protein"
                     /protein_id="HDK5717547.1"
                     /translation="MSYSIVRVSKVKSGTNTTGIQKHVQRENNNYENEDIDHSKTHLN
                     YDLVNDN"
BASE COUNT         1520 a          453 c          660 g         1152 t
ORIGIN      
        1 aaaaaaaact ttaataactt gattgatgag aaaatagaac aaaattatac aggaaaaaga
       61 aagattagaa cagatgcagt taaacacatt gacggtttaa ttacgtcaga taaggaattt
      121 tttgataatc agacaccaga agatacaaaa cagttttttg aacatgctaa agaattttta
      181 gaacaagaat acggtaaaga taatttatta tatgcaacag ttcatatgga cgagaaaaca
      241 ccacatatgc attatggcgt tgtgcctata actgatgacg gtcgtttaag tgcaaaagaa
      301 gttgtaggga ataaaaaggc tttaacagag tttcaagata gatttaacga atatgttaat
      361 caacgtggtt atgatctgga acgtgggcaa tcaagacaag ttacaaatgc aaagcatgag
      421 caaataagtc agtataagca gaaaacagaa tatcataaac aagaatatga gcgtgagagc
      481 caaaaatcag actatataaa gcaaaaaaac gataaattga tgcaagagta tcaaaaatca
      541 ttaaatacgc ttaaaaagcc tataaatgtt ccatatgagc aagaaactga aaaagtaggt
      601 ggtttattta acaaagaaac acaagaaact ggaaatattg taataagcca agaagatttt
      661 aatgcttttc aaaagcaaat agaagctgca caatcaatct cagatgacta tgaacgtatt
      721 aagtctggag ataaattaaa tgaaatggaa aaggaatata aagaagttag agataccttt
      781 ttaaaaacat atgagatgta tcaaggttta caacaagaaa atagagaatt gaaagaagag
      841 aataaagaga taaaagatga tttggataaa actaataaac ttttatatca ctgtaaaatt
      901 gctatttcta agttgttaga agaattgaat cgtatgtttg aaagaagaga atttgtagat
      961 aaaatacgag ggttagggaa agataatgac caagttctga atgttatgcg tattatagac
     1021 aaagagaata atcctcaaca ttatcaagaa caaaaacaag aagaacaaaa aagtgagcca
     1081 aaacgtgata gaggtatgag tagataaaaa aactgctgtt aatcagcact ctcaatgtga
     1141 taacagcagt ttcaaacctc attcaaaacc tatttagata ataggttaaa gggactaact
     1201 tcccacgtgc gtattataac aagaacacgc tattatgccg agaaaatcta tttgtcgatg
     1261 agagccctta attagactta aagcgccagc ggtcaatagc gtcagctatt aaatcgaccg
     1321 atggacagct ttaggattat taaggagcgc agaatcgtcg gcaaatagag gaattggaat
     1381 aatgcaataa actaaaaagt cttgatctaa atagaccaag acttttgata gtgttatatt
     1441 aataacaaaa taaaaataag aagtcgtcca ctccccgacc aaagtttgtg gaacgaccag
     1501 accaaatata ctgattatgt tatttgtaat ttttgtataa ttagatatta aacgatattt
     1561 gattatactt caacatttac atttgacgat tgggtggacg acttcttaaa aattaaggag
     1621 tcgatttttt tatgagtaaa aaagaacaac gaatcttttc aaatcaaagc ataggaagag
     1681 aaaattcaaa ttttgttaaa accggatact ctaatagccg gttaagtggt caaactttgg
     1741 gaaaatctca acccgcatta agttttgatg ccatgacaat cgttggaaat ttgaacaaaa
     1801 ctaatgctaa aaagctatct gactttatga gtgtagagcc acaaatacga ctttgggata
     1861 tacttcaaac aaagtttaaa gctaaggcac ttcaagaaaa agtttatatc gaatatgaca
     1921 aagtaaaagc agatacttgg gatagacgta atatgcgtgt tgaatttaat cccaataaac
     1981 tcacacatga agaaatgatt tggttaaaac aaaatattat cgactacatg gaagatgacg
     2041 gttttacaag attagactta gcttttgatt ttgaagatga tttgagcgat tactatgcaa
     2101 tgactgataa agcagttaag aaaactgttt tttatggtcg taatggcaag ccagaaacaa
     2161 aatattttgg tgtccgtgat agtgatagat ttattagaat ttataataaa aaacaagaac
     2221 gtaaagataa cgcagatgtt gaagttgtgt ctgaacattt atggcgtgta gaagttgaat
     2281 taaaaagaga tatggttgat tactggaatg attgttttaa tgatttacac atcttgaaac
     2341 ctgcgtgggc tactttagaa aaaattaatg agcaagctat ggtttatact ttgttgcatg
     2401 aagaaagtat gtggggaaag ctaagtaaga atactaagac taaatttaaa aaattgatta
     2461 gagaaatatc tccaattgat ttaacggaat taatgaaatc gactttaaaa gcgaacgaaa
     2521 aacaattgca aaagcagatt gatttttggc aacgtgaatt taggttttgg aagtaaaata
     2581 agttttattt tataaaaatt gctaattcag tataattaat atttacgagg tgacataacg
     2641 tatgaaaaaa tcagaggatt attcctccta aatataaaaa tttaaaattt aggaggaagt
     2701 tatatatgac ttttaatatt attgaattag aaaattggga tagaaaagaa tattttgaac
     2761 actattttaa tcagcaaact acttatagca ttactaaaga aattgatatt actttgttta
     2821 aagatatgat aaaaaagaaa ggatatgaaa tttatccctc tttaatttat gcaattatgg
     2881 aagttgtaaa taaaaataaa gtgtttagaa caggaattaa tagtgagaat aaattaggtt
     2941 attgggataa gttaaatcct ttgtatacag tttttaataa gcaaactgaa aaatttacta
     3001 acatttggac tgaatctgat aaaaacttca tttcttttta taataattat aaaaatgact
     3061 tgcttgaata taaagataaa gaagaaatgt ttcctaaaaa accgatacct gaaaacacca
     3121 taccgatttc aatgattcct tggattgatt ttagttcatt taatttaaat attggtaaca
     3181 atagcagctt tttattgcct attattacga taggtaaatt ttatagtgag aataataaaa
     3241 tttatatacc agttgctctg caacttcatc attctgtatg tgatggttac catgcttcac
     3301 tatttatgaa tgaatttcaa gatataattc atagggtaga tgattggatt tagtttttag
     3361 attttgaaag tgaatttaat tttatacacg taagtgatca taaaatttat gaacgtataa
     3421 caaccaccat ttttggttgc tggtgttttg attttgaatt tggttttgaa cttatggact
     3481 gacttgttca gtccattttt tgtgcttgca caaaaacatg ttttagcctc gcagagcata
     3541 cgatttaatg acttattgca aaataagtct agtatcttag acttaaacta ttaaatacac
     3601 atgaaacctt tgtgcttagg agtgattttt atatgtctta ttccattgtt agagtttcaa
     3661 aagttaaatc tggaacaaat acaacaggta ttcaaaaaca tgttcaaaga gaaaataata
     3721 attatgaaaa tgaagatata gaccatagta aaacacattt aaattatgat ttagtaaatg
     3781 acaat
//
LOCUS       DANHPA010000158         3782 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.161, whole genome shotgun sequence.
ACCESSION   DANHPA010000158 DANHPA010000000
VERSION     DANHPA010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3782)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3782)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3782
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.161"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(37..645)
                     /locus_tag="PTC28_002314"
     CDS             complement(37..645)
                     /locus_tag="PTC28_002314"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717548.1"
                     /translation="MLKTKKFTPALTLIPENIEIDQVDFSDQTLIEGIAPLFYYIYAK
                     SLKVSNRSIQLKKWRTNDNNFYTGKTIMMHDLIELMINQPHPSAVYQLSNELFNSEKD
                     RQMQADKFIKKYNLSLSAIINVTGRYMLKERHEVTHSDLYRLYRQFEDILMSNREMLC
                     FGYDSVHGFFKTDMGIVIFTSYPSIEQVRSDVSQLEKSSSSW"
     gene            complement(599..1918)
                     /locus_tag="PTC28_002315"
     CDS             complement(599..1918)
                     /locus_tag="PTC28_002315"
                     /inference="COORDINATES: protein motif:HMM:NF019850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase"
                     /protein_id="HDK5717549.1"
                     /translation="MHTISGILKILEPILVEQSIKNDFEINDFEINIKNLEHSNAALI
                     NISEASWRKWFRNKKSLKSNFSHIESLEIEIPLIISDERLPESWFGNYIIVENAFEAM
                     KLLGTYFREKYQNPLIAITGSFGKSSTRMMLETVLGDYELLYNRGNANMRIPIMLNLC
                     KLIRNPDFALFEVSLNALNNRGNMATNIKPDIAIVTGIGEAHLSSFSGTEEIAEFKAR
                     LFKGLSEEGVAIINGDTLHVDVLERRARLNTTHIKKYQIENDNEQSNIRVTDVKTLKG
                     AHEIAVVFNGNNIKFMLNSLSKGMVYNSLAVLLALSELNVDLEACVAKFSEFKPLKKV
                     LEFKEVTYKNAIYTLIDDTHNASLPAMINAIETFNNQAHFFKGRKVIAIGKINDLGED
                     SEMLHRRLIPILNACNADYILCLDSDLKMVVNRVKNKKIYTCTDIDT"
     gene            1983..2159
                     /locus_tag="PTC28_002316"
     CDS             1983..2159
                     /locus_tag="PTC28_002316"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717550.1"
                     /translation="MENKNTNNINEEIEKELLEYQAQKHDHPEPSSFSWPKALAFIIV
                     LMMFFIPIFKHIFM"
     gene            complement(2152..3771)
                     /locus_tag="PTC28_002317"
     CDS             complement(2152..3771)
                     /locus_tag="PTC28_002317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000393940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(glycerol-phosphate)
                     alpha-glucosyltransferase"
                     /protein_id="HDK5717551.1"
                     /translation="MYNTILKKFESEVSLLSQRIFLSLGTKEKKASVKHIKKSLNISK
                     DIMKQIENFKRKNEIYPEWVKLDFVTQEKQLPFEKVVDEMLRTRRNYIEFGVSFDKNW
                     IISFLPEVINANAFVRPIKGSKQRRLELAVNNVNHYLKHYTNVKRAFSIEDYEQKEVI
                     RFETQGYFFTPEAFYELEPSGGIKGVRKSKELHHEIDEMITTATYYLKNEMKENGQYE
                     YGRFPHFDRSISFYNILRHCSTTYSLIEGLSYLNEDIIEIQNAFTYIHQNAYYECGEV
                     AYIYDTTRDINEIKLGQNAAYIFAVVEFIKNSEPNTGLLKRAQKVANGILNMIDTDTL
                     ETYHVLNYPELSVKEKFRIIYYDGEAALALLRLYQVDQNEKWLNAVIRMFDKFIAQNY
                     WKYHDHWLSYCTNELVKIKPEARYIEFGLKNVSGYLDYIYHRETTFPTFLEMLTAAYQ
                     LIGNAKAMGFENTVRENIDEDFLVATLHHRANYQRAGYFYPEVAMYFKNPQRILGSFF
                     IKHHGYRVRIDDIEHYLSGYIQYQSHFKPIT"
BASE COUNT         1201 a          704 c          513 g         1364 t
ORIGIN      
        1 gtaactgagt caactgttga caaaagccat ccctttctac catgatgacg atgatttttc
       61 caattgagac acgtcgcttc gtacctgttc tatagacggg tatgacgtaa aaatgacaat
      121 gcccatatca gttttaaaaa agccatgaac tgaatcatat ccaaagcata acatttctct
      181 atttgacatt aatatatctt caaattgacg atataaccga tacaaatcac tatgtgtcac
      241 ttcatgacgt tcttttagca tataacgtcc agttacgtta ataatggctg acaaagacaa
      301 attgtacttt ttaataaatt tatcagcttg catctgcctg tctttctcac tattgaataa
      361 ttcatttgac aattgataca cagcacttgg atgtggttga ttaatcataa gctcaatcag
      421 atcatgcatc ataattgttt taccagtata aaaattgtta tcatttgttc gccatttttt
      481 taattggata gaacgattag acacttttaa tgattttgca taaatatagt agaacaatgg
      541 tgctattcct tcaatcaaag tttgatcaga aaaatcgacc tgatctattt cgatattttc
      601 aggtatcaat gtcagtgcag gtgtaaattt ttttgttttt aacacgattt acaaccattt
      661 ttaagtcact atctaaacac aaaatatagt cggcattgca cgcatttaat ataggaatta
      721 atcgtctatg cagcatttct gagtcctcac ctaagtcatt aattttacca attgctatca
      781 cttttctccc cttaaaaaag tgcgcttgat tattaaatgt ctcaatggca ttgatcatag
      841 ctggaagtga tgcgttatgt gtatcatcaa tcaaagtata aattgcattt ttataggtga
      901 cttctttaaa ttccagaacc ttctttaaag gcttaaactc tgaaaattta gcaacacacg
      961 cttctaaatc tacatttaat tctgataatg ctaaaagtac tgctaatgaa ttataaacca
     1021 tacctttact taaactattc agcataaact taatgttatt tccattaaaa actactgcaa
     1081 tctcatgtgc cccctttaaa gttttaacat ccgtcacacg aatatttgac tgctcattgt
     1141 cattttctat ttgatatttt ttaatatgtg tcgtattaag acgtgctctt ctttcaagga
     1201 catctacatg taatgtatct ccgttgataa ttgcaacgcc ttcttctgat agccctttga
     1261 ataaacgtgc tttaaactca gcaatttctt cagttcctga aaatgatgaa agatgtgctt
     1321 ctccaattcc tgtgacaata gcaatatctg gttttatatt tgttgccata ttgcctcgat
     1381 tgttcaatgc attcaaagat acctcaaaca acgcaaaatc tggatttcga attaacttac
     1441 atagattcag cataataggt attctcatat tagcgttacc tctattatac aaaagttcgt
     1501 aatcacctag tacagtttct aacatcattc ttgtagagct tttcccgaat gaacctgtga
     1561 ttgcaattaa aggattttga tacttttctc tgaaatatgt ccccagtaac ttcattgcct
     1621 caaaagcatt ttcgacaata atatagttcc caaaccaact ttcaggtagt cgttcatcac
     1681 taatgattaa aggaatctct atctctaagg attcaatatg cgaaaagtta gattttaatg
     1741 attttttatt acgaaaccat ttccgccaac ttgcttcact gatattaatt aatgccgcat
     1801 tcgaatgttc caaattttta atatttatct caaaatcatt aatctcaaaa tcatttttga
     1861 tactttgctc cacaagtatc ggttctaaaa tttttaaaat tccacttatt gtatgcatat
     1921 gtttttaacc tttcataaag ttgttaagtg ctttataatt taaggacagg agatgatgtg
     1981 tcatggaaaa taaaaataca aataacatta atgaagaaat tgaaaaagag cttcttgaat
     2041 atcaagctca aaaacacgat catccggaac cttctagttt cagttggcct aaagcacttg
     2101 catttatcat tgtattaatg atgtttttca ttccaatttt caaacacatt tttatgtaat
     2161 tggcttaaag tgtgactgat attgaatgta cccagataaa tagtgttcta tatcatcaat
     2221 acgtacgcga taaccatggt gcttaataaa gaagcttcct agtattcgtt gaggattttt
     2281 aaaatacatt gcgacttcag gataaaagta ccctgcacgt tgatagttag cacggtgatg
     2341 caacgttgcc actaagaaat cttcatcaat attttctcgc actgtatttt caaatcccat
     2401 cgctttcgca tttccaatta attggtatgc agcagttagc atttctagaa atgtcgggaa
     2461 tgtcgtttca cggtgataaa tataatctaa ataaccggat acgtttttaa gtccgaattc
     2521 gatataccgt gcttcgggtt tgattttcac aagttcattt gtacaataac ttaaccaatg
     2581 gtcatggtac ttccaataat tttgtgctat aaacttatca aacattcgga taaccgcatt
     2641 aagccacttc tcattttgat cgacttgata taaacgtaat aaagcaagtg ctgcttcccc
     2701 atcatagtaa ataattctaa acttttcttt cactgaaagc tctgggtaat ttagaacatg
     2761 atacgtttcc aaagtgtcag tatcaatcat gtttaatatc ccattggcta ccttttgcgc
     2821 tctttttaaa agtcctgtat ttggttcact attcttgata aattcaacca cagcaaaaat
     2881 atatgctgca ttttgcccta attttatttc attaatatca cgagtcgtat cataaatata
     2941 cgcaacttca ccacattcat agtaagcatt ttgatgaata taagtgaatg cattttgaat
     3001 ctcgataata tcctcattaa ggtaagacaa accttcaatt agagaataag tagttgaaca
     3061 atgcctcaat atgttataaa agctaatact tctgtcgaaa tgtggaaaac gaccatattc
     3121 atattgacca ttttctttca tctcattttt taaataatat gttgctgtcg ttatcatttc
     3181 atcaatttca tgatggagtt ctttcgattt acgaacacct ttaatccccc cagatggttc
     3241 taattcataa aacgcttcag gcgtaaaaaa atagccttgt gtttcaaaac gaatgacttc
     3301 tttttgttca taatcttcaa ttgaaaaagc tctttttacg ttcgtataat gcttcaaata
     3361 atggttaacg ttattaacag caagctctaa ccttctttgt ttactcccct ttataggtct
     3421 tacaaatgca ttagcattaa tgacttcagg taaaaatgaa ataatccaat ttttatcaaa
     3481 gctgactcca aattcaatat aattccttct cgtccgtaac atttcatcaa ctactttttc
     3541 aaaaggcaac tgcttttctt gagttacaaa gtccaattta acccattcag gatatatttc
     3601 atttttcctt ttaaagtttt caatttgttt catgatgtct tttgaaatat tcaacgactt
     3661 tttaatgtgt ttaacacttg ctttcttctc ttttgttccc aaactaagga aaatacgttg
     3721 actaagtaga cttacttctg attcaaactt tttcaaaatt gtattataca tcacttacct
     3781 cc
//
LOCUS       DANHPA010000159         3717 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.162, whole genome shotgun sequence.
ACCESSION   DANHPA010000159 DANHPA010000000
VERSION     DANHPA010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3717)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3717)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3717
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.162"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..437
                     /locus_tag="PTC28_002318"
     CDS             <1..437
                     /locus_tag="PTC28_002318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDK5717552.1"
                     /translation="FNHESEGTKKLITLALNILDETKRGSVFVMDEFDDSLHLNLSKI
                     MIKLFNLMENRSQFILTSHQLFLLDCDLRVDQIYLAKKDFEGASELYSIFDFNDDYGK
                     RSDLTIFKRYLEGVYGAVPNVTINDFTTLIGKKHHVDGGEDE"
     gene            825..1763
                     /gene="mdh"
                     /locus_tag="PTC28_002319"
     CDS             825..1763
                     /gene="mdh"
                     /locus_tag="PTC28_002319"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDK5717553.1"
                     /translation="MRRKKVSIIGSGHTGATLAFIVASHGNADVLIVDREKNASVMKG
                     KTLDMQQSGSILGFNVHVNSTVDYADTKDSDVVVITAGVPRQPGMSRDDLVQTNEQVM
                     VEVTKKIVQYSPHCTIIVLTNPVDAMTYTVYRTSGFPSERVIGQSGVLDTARFNTFVA
                     EALDVAVNDVTGLVLGGHGDTMVPLVRHSQVNGVPLNELLPPEKIEEIVERTRKGGAE
                     IVQLLGTGSAYYAPAAAVYEMLIAILEDQKRVLPTIAYCQGEYQLDDIYIGVPTVLGA
                     NGVERIIELELTDEEKAQLKRSAEAVEGVKAALKSL"
     gene            complement(1894..2604)
                     /locus_tag="PTC28_002320"
     CDS             complement(1894..2604)
                     /locus_tag="PTC28_002320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HDK5717554.1"
                     /translation="MHMSSKQVAWRDLWAIVIYFLAQIILGNVFSLFLIPSTQIPVAM
                     ALLIVGILTSIFVIIYLAWSHRHGLKTKITVALMQSRKHIKLMISVYVLYMIANMIFT
                     YVLQLLPEQWQFKETGNQEALMAFFHQPAWLPLVFLSLAILTPITEELLFRHIIIGEL
                     GKKWGLMFTGLISIVIFASLHMFAAHHPLEAVPYIFLATMFVVAYIKSGCNIAVSIFL
                     HMFNNTLAFIGVLFQIFS"
     gene            complement(2908..3525)
                     /locus_tag="PTC28_002321"
     CDS             complement(2908..3525)
                     /locus_tag="PTC28_002321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1361 domain-containing protein"
                     /protein_id="HDK5717555.1"
                     /translation="MNARYIARITYVVLILISILIPNQLMFLTLNVSLAYIPLELAYL
                     IKLFIPRRAFEWPLFIIYLFIFILMLPNTFYMVTDLIHLNQFTFNFLAELNLYEWFHF
                     TLLISSVIFSLYCYVLIVMEIYHLIQVTPLRIVALFGMMVLSGLGIYVGRFLRFHSVH
                     IINHPFSVIVSTLKSLNLEALIFVSFIILIQALLFLFVKGVRSRT"
BASE COUNT         1289 a          580 c          787 g         1061 t
ORIGIN      
        1 ctttcaatca tgagtctgag gggacgaaaa aattgattac tttggcattg aatatactag
       61 acgaaactaa aaggggaagc gtttttgtga tggatgaatt tgatgattct ctacacctaa
      121 atctttcaaa aattatgatt aaactgttta atctaatgga gaacaggagt caatttattt
      181 tgacttcgca tcagctgttt ttactagatt gcgatttacg cgtggatcaa atttatttag
      241 ctaagaaaga cttcgaaggt gctagtgaat tgtacagtat atttgatttt aatgatgact
      301 atggtaaaag gtcagattta acaattttta aacgctattt ggaaggtgtc tatggtgcgg
      361 tccctaatgt aacgataaat gattttacaa ctttgattgg caaaaagcat catgtggatg
      421 gtggtgagga tgagtaaaaa caaaagacga ggaagataaa aaaggcaaaa caccaaacaa
      481 aatagttaaa atatactgtg agggttacac tgaaaaacac tatgttgaca tgttaaggaa
      541 aaagcatagc aagtctaata tcagtgtgag tgttgaagcg gtttctcaaa gtcataaagc
      601 attggtcaaa atccttatac gaatatccac catgatttaa aagttatttt taatattaca
      661 aagcgtttat aagtaagtca taaaccatcc cccttatgtc aacttctata atgattcatt
      721 agcgtttgtc acaaagatta catgtaataa tgtgaatagt gttatacatt tataaaaatg
      781 caatgatata ataaaagtga tgaaagacaa gggggttttg gaatatgaga cgaaaaaaag
      841 tttcaattat tggatcaggt cacacgggtg caacacttgc atttattgtt gcttctcatg
      901 gcaatgcgga tgtgttgatt gttgaccgtg aaaagaacgc gtcagtgatg aaagggaaaa
      961 cattagacat gcaacaaagt ggctcaattt tgggatttaa tgtgcatgtg aactctactg
     1021 tcgactatgc ggatacgaaa gattcggatg ttgttgtcat tacggcaggg gtcccacgtc
     1081 aacctggtat gagtcgtgat gatttagtcc aaacgaatga acaagtcatg gttgaagtga
     1141 cgaagaaaat tgtgcaatat tcacctcact gtacgattat cgtcttaacg aacccagttg
     1201 atgcgatgac gtataccgtt tatcgtacgt caggttttcc gagtgaacgt gtcattggac
     1261 aatcgggtgt gttagatact gcgagattta atacatttgt tgcagaagct ttagatgttg
     1321 cagtgaatga tgtgacagga ttagtgttgg gcggacatgg ggatacgatg gtgccgttag
     1381 tgcgtcatag ccaagtgaat ggcgtgccac ttaatgaatt gttaccacca gaaaaaatag
     1441 aagaaattgt tgaaagaaca cgtaaaggtg gcgcagaaat tgtccaactg ttaggcacgg
     1501 gttcagctta ttatgcaccg gcagcggcag tttatgaaat gttgattgcg attttagaag
     1561 atcaaaaacg tgtattacca acgatcgctt attgccaagg ggagtatcag ttggatgata
     1621 tttatatcgg cgtgccaact gttttaggtg caaatggtgt cgaacgtatt attgaattag
     1681 agttaacgga tgaagaaaaa gcgcagttga aacgttcagc tgaagcggtc gaaggtgtaa
     1741 aggcagcgct gaaaagttta taaaccagtt gatgattgaa ctgacgtcca ttttaccggt
     1801 ccaacactga atcgagctgt aacgattcat gtattcaatt tcgtatataa aaataacccc
     1861 cacgtcgttt gattgtacgt gggggtttaa gtattatgaa aaaatttgga aaaggacgcc
     1921 gataaaagca agtgtattat taaacatatg caagaaaata gacacagcaa tgttacaacc
     1981 acttttaatg taagcaacga cgaacatcgt tgctagaaaa atatacggta ccgcttcaag
     2041 tggatggtgt gcggcaaaca tatgcaaact tgcaaaaata acgatagaaa tcagacctgt
     2101 aaacatgagg ccccattttt tgccgagctc gccaataatg atatgacgga aaagcaattc
     2161 ctcggtgatc ggtgtcaaaa tggctaaact taaaaatacg agtggtaacc aagccggttg
     2221 atggaaaaag gccatgagtg cttcttggtt gcctgtttct ttaaattgcc attgttcagg
     2281 taacaactgt aatacataag tgaaaatcat attcgcaatc atatagagca catacacact
     2341 gatcatcagc ttaatatgct ttctactttg catcaatgcg acggttatct tagtttttaa
     2401 gccgtgacga tgcgaccatg ccaaataaat aatgacaaag atggacgtga gtataccgac
     2461 aattaacagt gccattgcga ccggtatttg tgttgatggg attaagaata gactgaacac
     2521 attgcccaga atgatttgtg ctaaaaaata gatgactatc gcccataaat cacgccaggc
     2581 gacttgcttt gaagacatat gcatcatttt cctcctaggt actttgcttc tacagttatt
     2641 aaatgccaaa cagcaataaa tataagctta caaattgaag acatgtaaga atataactgt
     2701 attttagcaa taatttcact ttaaagggaa gttgccagtt tggataatgt cgttcgtaat
     2761 acaacagttg aattccgaat acagcaatgc ccataggtag taacagcatg acgaggggcc
     2821 accatttgcg ccagccgatt tgatagtaaa atagagtgat cagaagttga aaggccggta
     2881 tcgcactgat aaatataact gttgaaatca tgtacggctt cgaactcctt tcacaaataa
     2941 aaatagtaaa gcttgaatta atatgataaa tgacacaaaa ataagtgcct caagattcag
     3001 tgattttaat gttgagacga tgacggaaaa tgggtgatta ataatatgca cgctatgaaa
     3061 acgtaaaaag cgacctacat aaatgccgag tccactcaaa accatcatgc cgaacaaagc
     3121 aacgatacgt aatggagtaa cttgaatgag gtgataaatt tccatcacaa ttaacacata
     3181 acaataaagt gagaagatga ctgatgagat gagtaatgtg aaatggaacc actcatataa
     3241 attgagttca gccaaaaagt taaatgtaaa ttgattcaaa tggattaaat ctgtcaccat
     3301 ataaaatgtg tttggtaaca ttaatataaa gataaataag tatatgataa aaagcggcca
     3361 ttcaaatgca cgcctcggta taaaaagttt gatcaaatag gccaattcta atggaatata
     3421 agctaaagat acattgagtg ttaaaaacat taattgattg ggaataagta ttgaaataag
     3481 aattaatacc acataggtga tacgtgcaat gtatcgggca ttcatcgtga tacctccttc
     3541 tatgagatat atagcataac cgttaatttc gatggtttca aatttttcac tgtcttttaa
     3601 ataggaatca gtctcgagtt gtagagatga cagtgaaagt gaagggaagc ggaatcttta
     3661 catcacgtgc acaggctccc tttagatgat aataagctat aaaatttttg tttataa
//
LOCUS       DANHPA010000160         3710 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.163, whole genome shotgun sequence.
ACCESSION   DANHPA010000160 DANHPA010000000
VERSION     DANHPA010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3710)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3710)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3710
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.163"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            74..703
                     /locus_tag="PTC28_002322"
     CDS             74..703
                     /locus_tag="PTC28_002322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HDK5717556.1"
                     /translation="MTHEQDFQTILTGRRSVKLFDTEVKIPREEMNEMIRKATLAPSS
                     INMQPWRFVVVDTPEGKDTLRPLVQFNSRQNDTSAAMVVIFGDMLNYEHAEEIYGAAV
                     EKGYMPQEVKDDLVGKFVAMYEGLDQQSMNDVVKVDSSLAAMQFMLVAREHGYETNPI
                     GGFNREDIAADLGLDPERYVPVMIIAIGKAAEEGRPTSRLDVERIVQYR"
     gene            1035..1754
                     /locus_tag="PTC28_002323"
     CDS             1035..1754
                     /locus_tag="PTC28_002323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase family protein"
                     /protein_id="HDK5717557.1"
                     /translation="MFVDKNTPFNEESLRQEIAKYMNRDLKDISSIEEIVAFIELEHL
                     YRAALEEISTKLRILDEDFQIKYAHNPIHHMERRVKEIPSLLQKLKRKGYPLTAQAAR
                     ENIMDIAGIRVVCNYIDDIYTVEQLLLKQTDIQLLTRKDYVENPKKNGYRSLHIVISV
                     PIFLTDGMNDTPVEIQLRTIGMDMWASLEHKLHYKNQRGDSEMYCDTLKACAMEIGDV
                     EEKMQRIHLSIQRDREKLGTC"
     gene            complement(2064..2621)
                     /locus_tag="PTC28_002324"
     CDS             complement(2064..2621)
                     /locus_tag="PTC28_002324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDK5717558.1"
                     /translation="MKQWFFPLLFLSIVIVIAVTVVMHYDAIQHETSNRYHTLSDSFF
                     NQNRKTHGFGTYNRDLSFNGDNRHYGNDYRLPEDTSVLAPTNGTVTRTFKDKLGGNVL
                     EIREDNGQYFQWFMHLNEFKVKAGDTVAAGDVIALSGNTGEQTTGPHLHFQRMHGGVG
                     NRFAEDPDDFVDQLPDQQRSLYRLN"
     gene            complement(2789..3496)
                     /locus_tag="PTC28_002325"
     CDS             complement(2789..3496)
                     /locus_tag="PTC28_002325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase"
                     /protein_id="HDK5717559.1"
                     /translation="MKKSLLLTTTLAATIGTAGLAASGHDANAAEQGIDQVKLAAMAQ
                     HNDPSLNQHPIEEGSYEYNFTLDGVSYNFWSNGVQFGWSYNGFGQATQDYSSIAQPTQ
                     MADVSGLASQQSYSNGPSTTQQATSQAPKQQTAPSYTTQSTSTRSVKLANGNTAGSYG
                     TRAAQEMASRTGVSASVWETIIARESNGQLHARNASGASGLFQTMPGWGSTSTYEGQI
                     AAATKAYNTQGLSAWGM"
BASE COUNT         1161 a          626 c          753 g         1170 t
ORIGIN      
        1 ctatgtataa aatataattg aatcgcactt tatttaatga aatgtttaca ttataaaagg
       61 aaaggtgact attatgacac acgaacaaga ttttcaaaca atccttacag gccgtcgctc
      121 tgttaagtta ttcgatacag aagtaaagat tccacgtgaa gaaatgaatg aaatgattag
      181 aaaggcaaca ttagcaccgt catcaattaa catgcaacct tggcgttttg ttgttgtgga
      241 tactccagaa ggtaaagata cattacgtcc actcgtacaa ttcaatagcc gtcaaaatga
      301 tacttcagca gcgatggttg tcatttttgg tgatatgttg aattatgaac atgctgaaga
      361 aatttacggg gcagccgttg aaaaagggta tatgcctcaa gaagtcaagg acgatttagt
      421 aggcaaattt gtcgcaatgt atgaagggct agatcaacaa tctatgaatg acgttgttaa
      481 agtcgatagt agtttagcgg caatgcagtt catgctcgtt gcacgtgaac atggttatga
      541 aacaaatcca atcggtggct ttaaccgtga agacattgca gcagaccttg gtttagaccc
      601 tgaacgttat gtaccagtca tgatcatcgc tatcggtaaa gcagctgaag aaggtcgtcc
      661 aacatcacgc ttagatgttg aaagaattgt acaatatcgt taaaaataaa catactttaa
      721 gagatacagt tgagtgatgt ccattcaact gtattttttt gcaacgcttc atctaaagtg
      781 acaaacatga tgcatgctac acgaaagaca caaagttttt agtcgaacgc acaacgactt
      841 aagcaccttc aaatcataaa aaaacgtgat tttatctaaa aattcattgc ttcaaggaca
      901 agtttttatc acatttttaa atttcactgc agctttaagg aaaagtagta aaggactatt
      961 gaacctgata tgatgaaaga taacatagca tttaggacct tgattttaaa tatagtgatg
     1021 ttgaggtgaa agaaatgttc gtagataaaa acacaccttt taatgaagaa agtttaagac
     1081 aagaaatcgc taaatatatg aaccgtgatt tgaaggacat tagtagtatt gaagaaattg
     1141 tcgcatttat tgaactagaa catttatatc gtgcggcttt agaagaaatt agtacaaagt
     1201 tgcgtatttt ggacgaagat ttccaaatta aatatgcaca taatccgatt catcatatgg
     1261 aacgtcgggt caaagagatt ccgagcttat tgcaaaaact aaaaagaaaa ggctatccgc
     1321 tgacagcaca agccgcaaga gaaaatatta tggatattgc cggtattcgc gttgtttgta
     1381 actatattga cgacatttat accgtcgaac aattgttgtt gaaacaaacc gatattcaat
     1441 tattgacgcg aaaagattat gttgaaaatc caaagaaaaa tggctataga agtttgcata
     1501 ttgtcatttc tgtcccgatt tttctcacag atggtatgaa cgacacgcct gtagaaatcc
     1561 aattgcgcac tattggaatg gacatgtggg cgagtttaga gcacaagttg cattataaaa
     1621 atcaacgtgg tgattctgag atgtattgtg atacgttgaa agcgtgcgca atggaaattg
     1681 gtgatgtgga ggagaaaatg caacgaattc atttgagtat ccagcgtgac agagaaaaat
     1741 tagggacctg ttgatatgtg tagatttctt taaacatttt ccctttccta aggggcttgc
     1801 gcggttttga taatctggat ggaccttact cttatgtgac gctatacatc aagaatacat
     1861 cccaattttt tccaatagtc aatttaaatt taatcaagtt tctcaccatt ctaggcatga
     1921 tagttgaaac gttatagcca ttttgttgat tttgtcttat attttatttt cactgaacag
     1981 aatgggaagt aagaaacatg aaaaaacagg tgctaaaagg aatataacct taaagcacct
     2041 gttttttatt ttatcagtct catctagttc aatcgataaa gactacgctg ttgatctgga
     2101 agttggtcga caaagtcatc ggggtcttca gcgaaacgat tgcctacgcc cccatgcatt
     2161 cgttgaaaat ggagatgagg tcctgtcgtt tgttcgcccg tatttccgga caatgcaatg
     2221 acgtcaccgg cagctacagt atcgcctgct ttcactttga attcatttaa atgcatgaac
     2281 cattgaaagt attgaccatt atcttcgcgg atttctaaca cattgccacc gagtttgtct
     2341 ttgaaagttc ttgttacagt gccattcgta ggtgcaagga cagatgtatc ttcgggtaaa
     2401 cggtaatcat taccgtaatg tcggttgtcg ccgttgaaag atagatcgcg attgtacgtg
     2461 ccaaagccgt gtgttttacg gttttgattg aaaaatgagt cagataaggt atgatatctg
     2521 ttcgatgttt cgtgctgaat tgcatcgtaa tgcatgacaa ctgtgacagc tattacaata
     2581 acgatgctta aaaagagcag aggaaaaaac cattgcttca taagctcacc ttgtttttaa
     2641 gattgttttc tattgtataa ggcgctgtat atcaatgcaa tgattttgac tgaaaagtga
     2701 tttagatgtt agtcaagaga ggcgaaacaa tagaaaaaga acttgaagtg tgtcacacac
     2761 ttcaagttct tttaatgtta tatgaagatt acatacccca agcagataaa ccttgtgtat
     2821 tgtaagcttt tgtagctgca gcaatttgac cttcataagt gcttgttgaa ccccaaccag
     2881 gcatagtttg gaataaacca gatgcgcctg aagcgttacg agcatgtaat tgaccgtttg
     2941 attcacgtgc aataattgtt tcccatactg atgcagaaac acctgtacgg ctagccattt
     3001 cttgagcagc tcttgttccg tagctaccag cagtgttacc attagctaat ttaactgaac
     3061 gagttgatgt tgattgtgtt gtgtatgatg gtgctgtttg ttgttttggt gcttgactag
     3121 tcgcttgttg cgttgttgat ggaccattgc tgtaagattg ttgtgaagct agtccactta
     3181 cgtcagccat ttgtgttggt tgtgcaattg atgagtagtc ttgtgttgct tgaccaaaac
     3241 cattgtatga ccaaccgaat tgtacaccgt ttgaccaaaa gttatatgat acaccgtcta
     3301 aagtgaagtt gtattcgtat gaaccttctt caattgggtg ttggtttaat gatggatcgt
     3361 tgtgttgcgc cattgctgct aatttaactt gatcaatccc ttgttctgct gcatttgcat
     3421 catgtccgct tgctgctaat cctgctgttc cgattgttgc tgcaagtgta gtagttaaga
     3481 gtaatgattt tttcataata aataagtcct ccagtaaagt aagttttata tattcatttt
     3541 caaaagtatg cgtaattaaa aaattcaaca atcacactct accaacgaaa cgccattttg
     3601 taaattacgc gtaattaaca aaacattaca atcgtttttc attttgctgt tttgtaacat
     3661 aaatgtcatg ttgttaaaaa gttgttcatc actattcatg ctgataaagg
//
LOCUS       DANHPA010000161         3707 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.164, whole genome shotgun sequence.
ACCESSION   DANHPA010000161 DANHPA010000000
VERSION     DANHPA010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3707)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3707)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3707
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.164"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..676
                     /locus_tag="PTC28_002326"
     CDS             <1..676
                     /locus_tag="PTC28_002326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717560.1"
                     /translation="EAHKKLKVSNGYAFTKANYIDHHVALHTENFVENTRRSAGPSWK
                     FLLFSPTDKHHEKIFHFVVVSGRTFNKDKVNKGRRLIHNGGEPPEKKYLTELIELNRG
                     VDFEKLNQSLHVNHQLNADKMLFDMINNDSSDKIKFIMITYDVDHQSKMLKEIKVWIP
                     NPMTYSAIEFLNLTEEMNDVIKNDEHYQINEEEIEVLKQDREDVEWIDTEVFGFEIEE
                     IKESDL"
     gene            698..1885
                     /locus_tag="PTC28_002327"
     CDS             698..1885
                     /locus_tag="PTC28_002327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HDK5717561.1"
                     /translation="MFKGENLKALRMIEGYSRKSLADVLQVSEQAVWQYEEQNMMPEI
                     NKIYTLAQKFNVKTKFFFSPKQELFSIRAVDTHSIAFRSKNQRTSTKILSQNHAQANF
                     YAQLTSHLSAYVKQPHLPILTLVSKIDRYFSQNIDARVRIQLIANDAREMILGDQSNH
                     QLLLALEKYGVYIYEKDLTDDADAYSFWSKYQVPFIILSNNKGVAVRRHFDLAHELGH
                     LLLHRQIEFDMLSHEDFQRIEKEADIFAAEFLLPEKQFIASFNQVKKKSNPDHFVMLK
                     ERWYVSIQAMAMRAYYLGLISDTQYRYFWSLINKKGYKKREPLDAEIKLPKPVKINSL
                     LNMLFTKKVLTPESLLNNLQVEPEFLYKKANISQKLFEKFMQQEKQTAEADVLKGYII
                     PFT"
     gene            complement(1981..3585)
                     /locus_tag="PTC28_002328"
     CDS             complement(1981..3585)
                     /locus_tag="PTC28_002328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HDK5717562.1"
                     /translation="MNTLLMLVALSAVITPFICLVLLRMSALVGMTISAIVVTLLGFS
                     VWGIEAGVIGASLLQGAHKTLTIILILFGALTLLNTLRETNAVARINASFQSVSSDMR
                     IQVIIVAFLFGSLIEGASGFGTPAMVTAPLMVALGFRPLVSVTTALIADSISVSFGAV
                     GTPVIVGLSTLKRANEQLFSETAIHITLIDLFSGVFIPLIIVTTMIIFFGKSNKLNAV
                     LEILPWTLLIGAVYAIVAWIYASLTGPEFVSILSSLTTLIVAVVTARKGWLVPKNEWT
                     EALTDDYKVSDLSQPHEMSLLAAWSPYLIVVVLLLLTRIVAPVKTLTTTVLDLSWTHI
                     LGYPTISSSWQLLYSPGTILFIAAIFAILIQRKSFRHFSKACKDSAKTISVTGFTLIA
                     TLAMVHVFSNSGLNSKDLLSMPEFIANGMAHTFGDMWLFVAPFLGALGSFITGSATVS
                     TLTFAPVQANIADAIGADLYTVLAAQVIGGAAGNMICVHNVVAVCAVVNMAGKEGSVI
                     RKTLGPALLYCALVGISAFVFATFFL"
BASE COUNT         1291 a          646 c          709 g         1061 t
ORIGIN      
        1 tgaagcgcat aaaaaattaa aagtaagtaa tggttatgca tttactaaag cgaattatat
       61 tgatcaccac gttgcgcttc ataccgagaa ttttgtggaa aatacaagac gtagtgcagg
      121 accttcatgg aagtttttat tatttagccc gaccgacaaa catcacgaaa agatttttca
      181 ttttgtagta gtaagtggta gaacttttaa taaggataaa gtcaataagg gtagaagatt
      241 gattcataat ggtggtgaac ctccagaaaa gaaatatttg actgaattaa tagagttgaa
      301 ccgcggtgtt gattttgaaa agctaaacca atcattacat gttaaccatc aacttaatgc
      361 agataaaatg cttttcgata tgataaacaa tgactcaagc gacaaaatca aatttattat
      421 gattacttat gatgttgatc accaatcaaa aatgttaaaa gaaataaagg tttggatacc
      481 aaatccaatg acttacagtg ctatcgaatt tttaaattta acagaagaaa tgaatgatgt
      541 tataaaaaat gatgaacact atcaaatcaa tgaagaggaa attgaagttt taaaacaaga
      601 ccgagaagat gtagaatgga tagatacaga agtgtttggg tttgaaattg aagaaatcaa
      661 agaaagtgat ttataattaa aggaagcgtg aaatattatg tttaaaggtg agaaccttaa
      721 agcgttaaga atgattgaag gatacagtcg taaatcatta gcagacgtat tacaagtttc
      781 agaacaagca gtttggcagt atgaagaaca aaacatgatg cctgaaatca acaaaatata
      841 tactttggcg caaaaattca atgtaaaaac aaagttcttc ttctcaccaa aacaagaatt
      901 atttagtata agggcagttg atacgcactc gattgctttt cggtctaaaa atcaaaggac
      961 aagcacgaaa attttaagtc agaaccatgc acaagcaaac ttttatgcgc aattgactag
     1021 tcatttatcg gcatatgtga agcaacctca tcttccgata ttaactttag taagtaagat
     1081 tgaccgttat ttttcacaga atatcgatgc aagagtgcgt attcaattga tagcaaatga
     1141 cgcgcgggaa atgatactcg gtgaccaatc gaaccatcag ctgttattag cattagaaaa
     1201 gtatggggtt tacatttatg aaaaagattt aactgatgat gccgacgcgt atagtttttg
     1261 gtcaaaatat caagtaccat ttattatttt gtctaataac aagggtgttg ctgttcgaag
     1321 acattttgat ttagcacatg agttaggtca tttgttactt catcgtcaaa ttgaatttga
     1381 tatgttgtca cacgaagatt ttcaacgcat cgaaaaagaa gcagatattt ttgcggctga
     1441 atttttatta cccgaaaagc aatttatcgc gtcttttaat caagttaaaa agaaatcaaa
     1501 tcctgatcat ttcgtgatgt taaaagaacg atggtatgtt tctattcaag cgatggcgat
     1561 gcgtgcttat tatttaggtc tcatttcaga tacgcaatat cgttactttt ggtcattaat
     1621 taataaaaag ggttataaaa aaagagaacc gttagatgca gaaatcaaat tacctaagcc
     1681 agtaaaaatc aatagcttat tgaatatgct ttttaccaaa aaagtactga cacctgaaag
     1741 cctacttaat aacttgcaag ttgagcctga atttttatat aaaaaagcaa atatcagtca
     1801 aaagctattc gaaaaattta tgcaacaaga aaagcaaaca gctgaagcag atgttttaaa
     1861 gggttacatt atccctttca cataattact ttatggcgta aagcgttatc tctccttaaa
     1921 ccaaataata aaaaaagagt gccgaagact ttcatagcct gagcactctt ttttgatatg
     1981 ttataagaaa aatgttgcga atacaaatgc actgataccg acaagtgcac agtataataa
     2041 tgcaggtccg agcgttttac gaatgacact accttctttg cctgccatat ttacaacggc
     2101 acacactgct acgacgttat gcacacaaat catgtttcct gctgcacccc caataacttg
     2161 ggcggctaag acagtataca ggtcagcacc aatcgcatct gcaatgttcg cttggacagg
     2221 tgcgaatgtt aatgttgaaa cggtcgcact tcctgtaatg aatgagccaa gtgcacctaa
     2281 aaacggtgcg acgaatagcc acatatcacc aaatgtatgc gccatcccat tcgcgataaa
     2341 ttcaggcatg ctgagtaaat ctttactgtt gaggcctgag ttactgaaaa cgtgtaccat
     2401 cgctaacgtg gcaatgaggg tgaaacctgt cacgctaatt gttttggccg aatctttaca
     2461 tgcttttgaa aagtgacgga atgatttacg ttggatgaga atcgcaaaaa tggctgcgat
     2521 aaataaaatc gttcctggtg aataaagtaa ttgccaacta gatgagatgg ttgggtaacc
     2581 taaaatatga gtccaagata agtcgagtac agttgttgtc aatgttttga ccggtgctac
     2641 aatacgcgtt aataataaga gtacgactac gattaagtaa ggagaccatg cagccagtaa
     2701 actcatttca tgtggctgtg ataagtctga cactttgtag tcatctgtta aagcttctgt
     2761 ccattcattt ttagggacga gccagccttt acgcgcagtt acaacagcaa cgattaatgt
     2821 tgtcaatgaa cttaaaatgg agacgaactc aggaccagta agtgaagcat agatccaagc
     2881 aacaattgcg tacacggcac cgatgagtaa tgtccatggc aagatttcta atacggcgtt
     2941 taatttatta gatttcccga agaaaataat cattgttgtc acgataatca gtgggatgaa
     3001 cacaccgctg aataagtcaa ttaatgtaat gtgaatcgca gtttcggaaa atagttgctc
     3061 attggccctt tttaatgtac ttaacccgac gatgacgggt gttccgactg ctccgaatga
     3121 aacggaaata ctgtcggcaa ttaacgcagt agtcacactt acaagcggtc taaagccgag
     3181 tgcaaccatc aaaggtgcag tcaccatggc aggtgttcca aaaccagatg ccccctcgat
     3241 taaagaacca aataaaaatg cgacgataat gacttggata cgcatgtcac tggatacact
     3301 ttggaaactt gcattgatac gtgcgacggc attcgtttca cgtaatgtat ttaagagcgt
     3361 taatgcgcca aataaaatta aaatgatcgt taatgtttta tgtgcacctt gtaataaaga
     3421 tgccccgatt acacctgctt caatgcccca cactgaaaag cctagcaatg ttacgacgat
     3481 cgcactaatt gtcatcccaa cgagcgcgga catccttaac aaaacaagac aaataaatgg
     3541 tgtgatgact gcacttaatg caacaagcat caataaagta ttcatttctt gaccccctaa
     3601 agaactttcc cttaatagac atcttatgac tagatgactg tatcgattga attgtaagcg
     3661 tttttactac agattgcaat caaatttttt cgagtatctt tttgttt
//
LOCUS       DANHPA010000162         3534 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.166, whole genome shotgun sequence.
ACCESSION   DANHPA010000162 DANHPA010000000
VERSION     DANHPA010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3534)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3534)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3534
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.166"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..695
                     /locus_tag="PTC28_002329"
     CDS             <1..695
                     /locus_tag="PTC28_002329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020220026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDK5717563.1"
                     /translation="NIKAIIFDLEGTLLDRQKSRDKFIEEQYERFHDYLVRVQASDFR
                     KKFIELDDDEDHDKPDLYKEIIKQFNIDRLTWKDLFNDFEMHFYRYVFPFYDTTYTLQ
                     KLKEADYKIGVIANGKSKIKRYRVYALGIESYVTHLTTSEMVGFRKPHPRIYEEIIEK
                     LDVAPEEVVYVGDDALNDVAPARAMGMVSVWYRHGEREDEVIPLESEMDFEITTLEEL
                     LDILNIEREAEK"
     gene            695..1495
                     /locus_tag="PTC28_002330"
     CDS             695..1495
                     /locus_tag="PTC28_002330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDK5717564.1"
                     /translation="MHLFRSSDGTALNYRSMGKGYPIVMVHSVYMNHTVFEDIAKRLS
                     RYFQVILVDLRGHGYSDKPLTIDFHDYSQDLKELMEFLYIECATFIAIEMGSAVALDL
                     VQRDPKKVSELILINPTVSGEGLPHERLFRKYAETIRTWSDSEQDKFLEKHLYYAKGK
                     VRKFLKSVNDSAALLTDYEKNAVDQSFTDFELGEPLSEVQVRTLVIAGVANERIAPSE
                     SENIAELMPNATYELFKKSGVYPFVEEKEKFLKTVKSFMQRTTHNMDL"
     gene            1587..2090
                     /locus_tag="PTC28_002331"
     CDS             1587..2090
                     /locus_tag="PTC28_002331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717565.1"
                     /translation="MKKLVSAMLITGLTFSGIYAGTADAMSGNTLESVKSLQHGDRTV
                     EGVTIGERMSDVFRDKGHGIHTKEAYGHHHYYEIHTKDGVMIVTASGAGRHAKVTRVS
                     MIYNKLNGPKYQEVKDQVSARAIKREHHNHVTGGSGYISDGKVAYQFATSTPKNQTLK
                     LYRIDVE"
     gene            2179..2895
                     /locus_tag="PTC28_002332"
     CDS             2179..2895
                     /locus_tag="PTC28_002332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717566.1"
                     /translation="MRPNDRTLLENVEDYFTHKGVSPSLIDDVKENLRKDIQKSEAED
                     KDYIEYRQKSPAEMILTIQKNLFILQFNPVVFFIINFILISSLYDKQLVPFGAATGLS
                     LVYMLVMLPISIVIYTRIMHKNYLYRNKIESYAGGALAVFALVLILMNAFDLNLGIHV
                     VTHYAHIAMAVIGVIVTSFGLYKKYLEYTGIGLLLLQKTIDVIVADDQAAQLISIAIW
                     VMILVLIIFYTIELSASKRT"
     gene            complement(3106..3477)
                     /locus_tag="PTC28_002333"
     CDS             complement(3106..3477)
                     /locus_tag="PTC28_002333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016424365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SarA family transcriptional regulator"
                     /protein_id="HDK5717567.1"
                     /translation="MAVTRVKDCFELLSMVTYADRLKSVIKKEFKISFEEFAVLTHLS
                     YRIEEEYYLKDIINNLNYKQPQVVKAVKNLSQEGYFDKRRNENDERTVLILINDQQRE
                     KINALLDRVNETIKSTDIRPQ"
BASE COUNT         1156 a          581 c          727 g         1070 t
ORIGIN      
        1 caaacattaa agcaattata tttgatttag agggaacgtt gttagatcga caaaaatcac
       61 gtgacaaatt tattgaagag caatacgaac gttttcatga ttatttagta cgtgtacaag
      121 cctcagactt ccgcaaaaaa tttatcgaac ttgatgacga cgaagatcat gataaacctg
      181 atttatacaa agaaatcatc aagcaattca acattgatcg tttaacatgg aaagatttat
      241 ttaacgactt tgaaatgcat ttctatcgtt acgtttttcc attttatgac acgacctata
      301 ctttgcaaaa actgaaagaa gcggattata aaattggtgt tatcgcaaat gggaaatcta
      361 aaattaaacg ttatcgtgtt tatgcgttag gtatcgaatc ttacgtgaca catttgacga
      421 cttctgaaat ggtgggcttt cgaaaaccgc atccacgtat ttatgaagaa attattgaga
      481 aattagatgt cgcaccagaa gaggtggtgt acgtcggcga tgatgcgttg aatgacgtcg
      541 cacctgctcg agcaatgggc atggttagcg tctggtatcg tcacggtgaa agagaagatg
      601 aggttattcc tttagaatcg gaaatggatt ttgaaattac aacactggaa gaattattag
      661 atattttaaa catcgaacgg gaggctgaaa agtaatgcat ttatttagat catcagatgg
      721 gacagcattg aattatcgct caatgggaaa aggttatccg attgtgatgg tacattcagt
      781 gtatatgaat catacagtat ttgaggatat tgcgaagcgt ttgtcacgct attttcaagt
      841 gatattagtc gacttgagag gacacggata ctctgacaaa ccgttaacga ttgattttca
      901 tgattatagt caagatttaa aagaattgat ggagtttctg tacatcgaat gtgcgacatt
      961 tatcgcgatt gaaatgggaa gtgcggttgc attagacctc gttcaacgtg atccaaagaa
     1021 agtctcagaa ctcattttaa ttaatccgac tgtctctgga gaaggcttac cacatgagcg
     1081 cttgttccgt aaatacgctg aaacgattcg tacttggagc gattcagaac aagataagtt
     1141 tttagaaaag catttatact atgctaaagg aaaagtgcgc aagtttctta aaagtgtcaa
     1201 tgactcagca gctttattaa cagattatga gaaaaatgca gtggaccaat catttacaga
     1261 ttttgaactt ggtgaaccat tgtctgaagt gcaagtacgc acactcgtga ttgcaggagt
     1321 ggcgaatgaa cgtatcgcgc cgagtgaatc tgaaaatatt gccgagttga tgccaaatgc
     1381 gacgtacgaa ttatttaaaa agtcaggcgt atatccattt gtagaagaaa aggaaaaatt
     1441 tctcaaaaca gtgaaaagct ttatgcaaag aacgacacat aatatggact tgtaaccatt
     1501 ttgtaataca actgttattt tattgcaatt tagggtatga tgataatgag cacaaaaaag
     1561 agagacaaaa gaggagcgtg tgccctatga aaaaactagt cagtgcaatg ttaataacag
     1621 gacttacatt ttcggggatt tatgcaggta cagcagatgc gatgtcaggg aatacattag
     1681 aatcagtgaa atcattacaa cacggcgatc gcacagtaga aggtgtgaca attggcgaac
     1741 gaatgagtga cgtattccga gacaaaggcc atgggattca tacgaaagaa gcttacggtc
     1801 atcatcatta ttatgaaatt catacaaaag atggtgtgat gattgtgact gcgagcggcg
     1861 cgggtcgaca tgcgaaggtg acacgtgtga gtatgattta caataaactg aacggtccga
     1921 agtatcaaga ggtgaaggat caagtgagtg cacgtgcgat taaacgtgaa catcataacc
     1981 atgtcacagg gggtagcggt tatatttcag atggcaaagt ggcataccaa tttgcgactt
     2041 ctacaccaaa aaatcaaaca ttaaagcttt atcgcattga tgtagagtaa tgtacgacgc
     2101 aactgtacaa acggaagcgt ctacacgcca ggtctcactt ctgatataat ggtgctatca
     2161 aatgagacgg aggattttat gagacctaat gatcggactt tactggagaa tgtagaagat
     2221 tactttacgc acaaaggtgt atctccaagt ttaatcgacg acgttaaaga aaatttgaga
     2281 aaagatattc aaaaatcaga agcggaagat aaagactata tcgaatatcg tcaaaaatct
     2341 ccggctgaaa tgatactaac aatacaaaaa aacttattta tattacagtt caacccggtc
     2401 gtgtttttta tcatcaactt tatattaatt tcatcgctct atgataaaca attggtgcct
     2461 ttcggtgctg ccacaggttt atcactcgtg tatatgcttg tcatgttgcc gatatcgatc
     2521 gttatatata cacgaatcat gcataaaaat tatttgtatc gcaataaaat agagagttat
     2581 gcagggggag ctttagcggt ttttgccctc gtactcattt taatgaatgc gtttgatttg
     2641 aacttaggta ttcatgttgt gacgcattat gcacatatcg cgatggcagt aattggcgtg
     2701 atcgtgacga gctttggatt gtataaaaag tatttagagt acacaggaat tggcttatta
     2761 ttacttcaaa agaccattga tgtgattgtt gctgatgatc aggcggctca gctcatttcc
     2821 attgcaattt gggtgatgat tttagtgttg attattttct acacaattga attgtcagcg
     2881 agcaaacgaa cataagtggt atccaagcag tataaaatac cctttcgaag cgtgttacat
     2941 taagcaatgt cacttcgaaa gggtattttg gtgagggtta aacggagcaa aaaagtaaaa
     3001 ccactcgttg tagtcgtata aaaagacaat gagtggtttt actttacact tgtacgtatg
     3061 ctccataagc cccatacgtt tcataattca tgctttgttc caaaattact gtggtcgaat
     3121 atctgtagat ttgattgttt cattaacacg gtctagtaaa gcgttgattt tttcacgttg
     3181 ttgatcgtta attaaaatca gtactgtacg ttcatcgttt tcattacggc gtttatcgaa
     3241 atatccttct tgagataagt ttttaacagc tttcacgact tgcggttgct tatagtttaa
     3301 gttgttaatg atatctttta aataatattc ctcttctatt ctatagctta agtgtgttaa
     3361 aaccgcgaac tcttcaaaac taattttaaa ttccttttta atcacacttt ttaatctatc
     3421 agcgtaagtc accatagata ataactcaaa acaatccttg actcttgtaa cagccatact
     3481 cataacctcc catatatatt acccttaaac gtcttttgaa atataataca cgat
//
LOCUS       DANHPA010000163         3460 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.167, whole genome shotgun sequence.
ACCESSION   DANHPA010000163 DANHPA010000000
VERSION     DANHPA010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3460)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3460)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3460
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.167"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            149..637
                     /locus_tag="PTC28_002334"
     CDS             149..637
                     /locus_tag="PTC28_002334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDK5717568.1"
                     /translation="MIKILTHNDLNQFKQLINDAQLIETNPNHYEVELTPEDIAALFH
                     PDNQARTVLLGAFDADALVGFIQLNYNSQLTKRHKAVIEHLYVVPQYRSEGVAQQLLE
                     VLIPHAKENGIENIFISVASNNIAAKIFYDNFGFEFLALEENARKINGHYIEDHWLIY
                     YT"
     gene            648..1019
                     /locus_tag="PTC28_002335"
     CDS             648..1019
                     /locus_tag="PTC28_002335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgA family protein"
                     /protein_id="HDK5717569.1"
                     /translation="MKETTKIQHTWRYQKYNVMMRNYKDYQRIQALIKQGASFKVVDA
                     TIQEILIKPIEHPAFMNTFQHLWGYFKKIATPSEKERYTSLLKQLDMQTVAYDTCIQF
                     IQHLTLKYEQPYLLQSAIMKL"
     gene            complement(1076..2299)
                     /locus_tag="PTC28_002336"
     CDS             complement(1076..2299)
                     /locus_tag="PTC28_002336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase family protein"
                     /protein_id="HDK5717570.1"
                     /translation="MNKRKTSRFTYFIMSVSIIAIFVSGCYLYYQFKHLNEEDALTIQ
                     DRKQQRQAHTAEKSQEIKPLETIVDQQNPVFNTIDRYLESVQFNGTIAVFENGHLKMD
                     KGYGYQDFEKQKKNSPNTVYLIGSAQKFLTGIIVKKLELENKIHVEDSVSTYIPDFQL
                     PQDVTIKDLLMHQSGFYKYQGSDDISDLDGAIKAIEARGIDPKFYHKHFYNDANYLVL
                     AKVIENVTGQSYVQNYYRYIGNPFRLMHTSFFDDERYKEDMAKGYRLDKKTHNVVFRE
                     PHYLNQYYGAGNLYMSAHDMGVLVRKLQTNRIFPEKITLPYIHEFMTPRYPEKYRYGF
                     YVYNNFNRINGIFFGQIFTTYYNDKYIIVLGTNYDQPKPHNNEARIKHIYFDILNQHA
                     IINQPGITVPVPKSS"
     gene            3090..3317
                     /locus_tag="PTC28_002337"
     CDS             3090..3317
                     /locus_tag="PTC28_002337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000617704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717571.1"
                     /translation="MIRFDVNGSDHANPPNFDRIPTPHLHIMTDEYKNGTIAIPLYDI
                     QNIELINEMIDALDFFMDYTKIKKDNIIIKP"
BASE COUNT         1200 a          624 c          530 g         1106 t
ORIGIN      
        1 aaggtatatt ttaataaaga taaacagcat tctttttata aatatgtttt ttgaattcag
       61 aaaattctta aataacgttg aatttacaat tttatttgtt tatgattaat agtgagatat
      121 cggattgaag taaactggag gtggcgcaat gataaaaata ttgacgcaca acgatttgaa
      181 tcaatttaaa caactcatca acgacgcgca actgattgaa acaaatccca atcattatga
      241 agttgaactc acacctgaag acatcgctgc tttatttcac ccagataatc aggcacgcac
      301 agtactatta ggtgcatttg acgctgatgc attagtcggt ttcattcagc ttaactacaa
      361 ttcacagctt acgaaacgtc ataaagcagt cattgaacat ttatatgttg tacctcaata
      421 tcgaagtgaa ggggttgccc aacaattatt agaagtcctc atccctcacg ccaaagagaa
      481 tggcattgaa aacatcttca tctctgtcgc atcaaacaac attgccgcaa aaatttttta
      541 tgataacttt ggcttcgaat ttctagcttt agaagaaaac gcacgtaaga ttaatgggca
      601 ttatattgag gatcattggc tcatttatta tacataagag gtgtaaaatg aaagaaacga
      661 cgaaaattca acatacttgg cgctatcaaa aatacaacgt catgatgcgt aactataagg
      721 actatcaaag aattcaagca ctaatcaaac aaggcgcctc ttttaaagtg gtagacgcaa
      781 ccattcaaga gattttaata aaaccaattg aacatcccgc gtttatgaat acattccaac
      841 atttatgggg ttatttcaaa aaaatcgcga caccctcaga aaaagaaagg tatacctctt
      901 tactcaaaca acttgacatg caaacggtag catatgacac atgtatccaa tttatccagc
      961 acctcacgct aaaatatgaa caaccttatt tacttcaaag tgctatcatg aaactataat
     1021 aagaaacgca acgaaccttt gatgatgaga ttcattgcgt ttttattgcg tcgatttatg
     1081 atgatttcgg cactggcact gtgataccag gctgattgat aatcgcatgc tgatttaaaa
     1141 tgtcaaaata aatatgctta atacgtgctt cgttgttgtg tggtttaggt tgatcatagt
     1201 tcgtacctaa cacaataatg tatttatcgt tgtaatacgt cgtaaatatt tgtccgaaga
     1261 aaatgccatt gatgcggttg aaattattat atacataaaa accgtaacga tatttttcag
     1321 gataacgcgg cgtcatgaat tcgtgaatat atggtaaggt aatcttttca ggaaatatac
     1381 gattcgtctg taacttcctc accaacacac ccatatcgtg tgctgacata tacaaattgc
     1441 ccgcaccata atattgattt aaataatgcg gctctcgaaa gactacattg tgtgtctttt
     1501 tatccaatcg atatcctttc gccatatcct ctttataccg ttcatcatca aagaagctcg
     1561 tatgcattaa tctaaatgga ttcccaatat aacgataata attttgaaca taagattgtc
     1621 ccgttacatt ttcgatcact ttagccaaca caagataatt ggcatcgtta taaaaatgtt
     1681 tgtgataaaa tttagggtca ataccacgtg cttcaatggc tttgatcgcc ccatctaaat
     1741 ctgaaatatc atctgaacct tgatatttat aaaaaccgct ttgatgcata agtaagtctt
     1801 taatcgttac atcttgtggt aattgaaagt caggtatata ggttgacact gaatcttcaa
     1861 catggatttt attttcaagt tctaactttt taacgatgat acccgttaaa aacttttgag
     1921 ctgagccaat taaataaacg gtattgggac tatttttctt ttgtttttca aaatcttgat
     1981 aaccataccc cttatccatt tttaaatgac cattttcaaa caccgctata gttccattga
     2041 attggacact ttctaaatac cgatcaatcg tattaaatac agggttttgt tgatcaacga
     2101 ttgtttcaag tggtttgatt tcttgtgatt tttcagctgt atgcgcttgt cgctgttgtt
     2161 tcctatcttg aatcgtcaac gcatcctctt cattcaaatg tttaaactga tagtataaat
     2221 aacaaccact tacgaatatg gcaataattg aaacactcat gatgaaataa gtgaatcgag
     2281 atgtttttct tttgttcaca tttgttctac tcctctatca ttctccactt ttacctattc
     2341 attaactgaa gcgttaacta ctaaaggtat catcaaatta ggagaattga agtgttggtg
     2401 taatacttcg ctgtttaatg atatgtccct ctattgaaac atttgagcaa ttgtattgta
     2461 taaagtgtac catgaaatat atcgaattta aaaatgattt tatgttttta tcgtgcaacg
     2521 ctattgtgaa atgataaact tgcgatgact tcggatatat cctccatctt tcatgcaaaa
     2581 aaggtcgtta tttagtccta ttacgccttg gattttggct gacttaaatc atttcaagcg
     2641 caattcaatc cttcaaattg agacttgcaa atataagaag cacaatataa tattgatgta
     2701 aatattccag ttgcctcaac ctccgttcaa tccacctacc tttaactcaa gtttttgatt
     2761 gactacattt taaattcatt gtatccacac gatatgacaa ttttcagcta ctattttcaa
     2821 tctaatccgt cccacatcag caaatcacaa tgaaacatta ataaaggaga atgcctatgg
     2881 aaaaagaaat atacgaacaa ttaatgtgta aaataaaggt cttcgaaaaa aatattgtca
     2941 acttaccgag agttggagag caaattcagc accatttgat tcatattatc gatgacgctg
     3001 aaagatttaa attaatcatt aataaacgag gtcataaaaa tcccgataac cttacaataa
     3061 tgctatacag tatgaatcaa aatagcacta tgatacgatt tgacgtaaat ggaagtgatc
     3121 atgccaatcc tccaaacttt gaccgaatac ctacgccaca cctccatatc atgactgatg
     3181 aatataaaaa cgggactatt gctataccat tatacgacat acaaaatatt gaactgatta
     3241 acgagatgat agatgctcta gattttttta tggattatac taaaataaaa aaagacaata
     3301 tcatcatcaa gccataatca ctttaaagca gaaaggagtg aattgcatat ggagagcatt
     3361 gaacaaaaaa tgaatgaata ttttaaatgg atgaaacaaa actataaata caaaaaatta
     3421 gaagattcaa cagaaataac tacaccgttt atcaaccctt
//
LOCUS       DANHPA010000164         3448 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.168, whole genome shotgun sequence.
ACCESSION   DANHPA010000164 DANHPA010000000
VERSION     DANHPA010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3448)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3448)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3448
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.168"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(252..914)
                     /locus_tag="PTC28_002338"
     CDS             complement(252..914)
                     /locus_tag="PTC28_002338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDK5717572.1"
                     /translation="MKAIEINHITKKFGSRTIIRDFSLDIHQGEFVAIVGKSGCGKST
                     LLNMIGLLETIETGEVKIYNQAIPNINSATATKLRRHTINYLFQSYALISDMTVKDNL
                     LLALEYVKISKKEKLDKIQQVLQKLEIDTLLNDKINTLSGGEQQRVAVARTILKPGDI
                     ILADEPTGALDPKLADIAFEFIRELRDTDNKTIVLVTHNVEQAKQADRLIDLSELNEL
                     VQ"
     gene            complement(914..3109)
                     /locus_tag="PTC28_002339"
     CDS             complement(914..3109)
                     /locus_tag="PTC28_002339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDK5717573.1"
                     /translation="MKNIQLVGKIRYLIFALVAIQAIIILMMTTFRLGEWYDEKWDEV
                     QNSANQHQFYLNRITIEQKEDVMDVLKQFPELLILTSTVDEETKHELIGLTGKAEQFP
                     EIQLYDHTIMSQQDIVKLLNSKNEKATIGDFNGSIHNIKEFNTPYFAKKHSIVDLQSY
                     IHTTKSINGSYTVYGSEQQFKQLIKALSVVTHQSETALTTINGGVAKMDNTVTVVLSC
                     LLIMTMLAVFILFIAVTVANLKNLGHLTLLGWSKWAVANKVLRQFVVFSILIIPVFAV
                     ILWYVSGWHSITLKVLSYFFLGGVINLTLTLFMTGIAVLTVFSMKPVDAIKGKVPHRT
                     LYGMGALGYVLLSILLVFGSVRLDEPIKEVVQNFRIAKQWENVSNYYTLKDMQTGEDL
                     STIAGKSNALDRDIYHWYQSIVKDANVFIAHSEYFDKDLLEYYREQAIYENVPEKAFW
                     YMTFSPNYLKNIHLNVAQQYIDNAESGTKVFLIPDSYTKQQKEKFEQWIKESESTERN
                     ENDIPTAYNQENRFKFITYHFQQKIFSWNNTPNDEVMVKDPIIYIITPENMNYLQSES
                     LRSNDLNSYIKFKDRKTAENYTTKSYLEQYHLADNELKFVPIQVFIDGLQKDLAETIV
                     WFGSFIVGALLLSILLLISLAYVYRLTHYERLYISKFLGFSFFKMYSLPMILILSIWA
                     IDMLVVLFWPSKSGIVSITIYGAIQLLIFYLYMSRNDIKQLLLTIKEKS"
     gene            complement(3129..3347)
                     /locus_tag="PTC28_002340"
     CDS             complement(3129..3347)
                     /locus_tag="PTC28_002340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717574.1"
                     /translation="MKLKSPTFHGVKIHWEYGRTFFTYSYSIVQTGRFTHSATANSTF
                     SGWKRPGVKAVAKQYVGWRSAVAYWNCR"
BASE COUNT         1118 a          640 c          507 g         1183 t
ORIGIN      
        1 aaaataaaga ttgcttttta taatatctcc tcctataaaa tgaataataa aagaaaatag
       61 actattttga attttaatta taaacagttc ggtttataag tgttttctct attgcatata
      121 tatttcgtca ataaataatc ggaaaagata gggcattgtc aacgtgttac gttatgtatg
      181 attgactagt aacatcaaat tctagtaaac gttatagaat ctattcttat tttaagaacc
      241 tataaaagaa gttactgaac caattcattc aattcactaa gatctattaa acggtcagct
      301 tgtttagcct gctcaacatt atgtgtgaca agtacaatgg tcttattatc agtatcccgc
      361 aattctcgta tgaactcaaa agcgatgtca gcgagttttg gatcaagcgc accagtcggc
      421 tcatctgcta aaatgatgtc acctggtttt aaaattgttc ttgctaccgc tacacgttgt
      481 tgctcgccac ccgataaagt attgattttg tcattcaata atgtatcaat ttcaagtttc
      541 tgtaacactt gctgaatttt gtctagcttc tctttcttgc tgattttgac atactccaac
      601 gcaagtaata agttgtcttt tacagtcata tcagaaatga gcgcatagga ttgaaataaa
      661 tagttaatcg tatgtcttct caattttgtc gctgtagctg agttaatgtt aggaatcgcc
      721 tggttgtaaa ttttgacttc acccgtttct atcgtctcta gaagccctat catattgagc
      781 aatgtcgact tcccacaacc cgatttccca acaattgcaa caaattctcc ttgatgtata
      841 tcaagtgaaa aatcacggat aattgttcta cttccaaatt tcttcgttat atgattgatt
      901 tcaattgctt tcattatgat ttctccttaa ttgtaagaag taattgttta atatcattac
      961 gcgacatata taggtaaaaa atgagtaact gaatcgcacc gtaaattgta atagaaacaa
     1021 tccctgattt tgacggccag aataaaacga caagcatatc aatcgcccaa atacttaaaa
     1081 tcaaaatcat cggaaggctg tacattttaa agaaactgaa gcctaaaaat tttgaaatat
     1141 aaagacgttc ataatgtgtt aatcgataca cataagccaa tgatatgagt aaaagaatgg
     1201 atagcaataa tgcaccaacg ataaaactac caaaccaaac gatggtttct gctaagtctt
     1261 tttgaagtcc atcaataaag acttgaatag ggacaaattt cagttcattg tctgccaaat
     1321 gatattgttc caagtagctt ttcgtagtat agttttctgc tgtctttcga tccttaaact
     1381 tgatataact attcaaatca ttacttctca aactttctga ttgcaagtaa ttcatatttt
     1441 ctggtgtaat gatataaata atcggatctt ttaccatcac ttcgtcattc ggggtattgt
     1501 tccaactaaa tattttttgt tgaaaatggt aagttataaa tttaaaacga ttttcctgat
     1561 tatatgcagt cggaatatca ttttcatttc gttcagttga ctcactttct ttaatccatt
     1621 gttcaaattt ttctttctgc tgtttcgtat aactatcagg aattaaaaac acttttgtac
     1681 cactctcagc attatcgata tattgctgtg ctacattgag gtgaatattc tttaaataat
     1741 taggtgaaaa tgtcatatac caaaatgctt tttctggcac attttcataa atcgcttgct
     1801 ctcgataata ttcaagcaaa tctttatcaa aatattcaga atgcgcaatg aatacgttag
     1861 catctttcac gatagattga taccaatgat aaatgtcgcg atctagcgca ttagattttc
     1921 cagctatggt cgaaagatct tcccctgttt gcatatcttt taatgtatag taattagaaa
     1981 cattttccca ttgtttcgca atccgaaaat tttgtacgac ctctttgatt ggttcatcta
     2041 aacggacact accgaatacg agtaaaatac ttagaagcac ataacctaat gcgcccatgc
     2101 catagagtgt acggtgaggc actttccctt taattgcatc taccggtttc attgagaaca
     2161 cagtcaacac cgctatgcca gtcatgaaga gtgtgagtgt taaattgatg acgccaccta
     2221 aaaagaaata agacaaaact tttaatgtta tcgaatgcca gccactcaca taccataaaa
     2281 taactgcaaa aacaggaata atcaggattg aaaacaccac aaattgacgc aacactttat
     2341 tcgcaactgc ccattttgac caccctaaaa gcgttaaatg ccctaaattt ttaaggttcg
     2401 caactgtaac agcaataaat aatataaaca ctgctaacat tgtcatgatt aataaacatg
     2461 acaatacaac agtgactgta ttgtccattt tagcaacgcc gccattaatc gtggtcaaag
     2521 ccgtttcaga ttgatgcgtc actacagaca aagctttgat caactgtttg aattgttgtt
     2581 ctgaaccata aactgtgtat gagccattga tactttttgt cgtatgaata taagactgca
     2641 aatcgacaat agaatgcttt ttagcaaaat atggcgtatt gaattcttta atgttatgaa
     2701 tagaaccatt aaaatctcca atcgttgctt tttcattttt actatttaat aattttacta
     2761 tatcctgttg tgacatgatt gtatgatcat acagttgaat ttctggaaat tgttccgctt
     2821 tacctgttaa accaatcaat tcatgctttg tctcttcatc aaccgtcgat gtcaaaatca
     2881 atagttcagg aaactgtttt aatacatcca tgacatcttc tttttgctcg atggtgatac
     2941 ggtttaaata aaactgatgc tgattagccg aattttgtac ctcgtcccat ttttcatcat
     3001 accattcacc caaacgaaaa gttgtcatca tcagaataat gatggcttgt atagcaacta
     3061 atgcaaagat gagataccgt atctttccta ctaattgtat atttttcatt tattctcacc
     3121 tattgtgctt atctacaatt ccaataagct acagccgatc tccatccaac atattgtttt
     3181 gccactgctt taacacctgg tcttttccaa ccagaaaaag ttgaattagc cgttgccgag
     3241 tgtgtaaatc tacctgtttg aactatagaa taactgtaag taaaaaacgt tcttccatac
     3301 tcccaatgta ttttgacacc atgaaatgtt ggacttttta atttcatatt ttctacctct
     3361 taaaacagaa ttaataagcg cttacattga cattatacta cattatccac taaagtaaat
     3421 aattatttta tttagtttca aattatat
//
LOCUS       DANHPA010000165         3441 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.169, whole genome shotgun sequence.
ACCESSION   DANHPA010000165 DANHPA010000000
VERSION     DANHPA010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3441
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.169"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(626..2068)
                     /locus_tag="PTC28_002341"
     CDS             complement(626..2068)
                     /locus_tag="PTC28_002341"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HDK5717575.1"
                     /translation="MSKLPASFMWGGALAANQFEGGYDQGGKGLSVIDVMTGGAHRKT
                     REITMSVEADKYYPNHVGIDFYHRYKEDIALFKEMGLQCLRTSIAWTRIFPNGDELEP
                     NEEGLQFYDNIFDELLKNNIEPIITLSHFEMPLHLAREYGGFRNRKVVDYFARFAQVV
                     FERYKDKVTYWMTFNEINNQMDTGNPIFLWTNSGVSLNDNDNPEEVLYQVAHNELIAS
                     AKAVKIGKMINQNFKIGSMISYVPIYPYSCHPKDMMKAQIKNRLRYFFPDVQVRGYYP
                     SYAKKMFEQKGYHIGWQDGDEEILREGVVDYIGFSYYMSTVVKHDTQTGVSNNIINSG
                     LPNSVENPHIKISEWGWAIDPEGLRYTLNVLYERYQVPLFIVENGFGAIDKVENNQIH
                     DDYRINYLREHIEAMIDAVDKDGVDLIGYTPWGIIDIVSFTTGEMKKRYGLIYVDRDN
                     EGRGTLERLKKDSFYWYQKVIETNGKDLGE"
     gene            2390..3097
                     /locus_tag="PTC28_002342"
     CDS             2390..3097
                     /locus_tag="PTC28_002342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDK5717576.1"
                     /translation="MLLKYEKIAHDIHTFITNHQFKAGDKLPSVTTLKEKYEVSKSTI
                     IKALELLEHDGIIYQAQGSGIYVRNARNDNHINVFKTNGFSKSLNEHQLTSKVLKLEE
                     ITDIPETVMQELNLSKGDSVYYLERLRYVDGNVLCIEYSYYNKEIVKYLNTEITEGSI
                     FDYLEQNMQVKVGFSDIYFNADQLNTNEAQLLKLEPNDPCLRYHQTFYTTTGIPFDAS
                     DIVFHYKNAHFYIPSKR"
BASE COUNT         1124 a          696 c          462 g         1159 t
ORIGIN      
        1 tttatatatg tttttaaaat aaattataaa atttaatata catttttata gcaagggttt
       61 ctcctagcct ctcacataca tctataattt ggatttcaga tcttttgaaa gcacttatgt
      121 ctccaaaact actcctaccc ttgaaaatta aatcatagaa gcgatgtcca aaacaaataa
      181 caaaatcata tcaaccacaa caactttttc atcttatact cgttctttta attgatccaa
      241 cattaatatt gcccattcga aaatttgcat gctcacttaa caaattgaga tgataccttg
      301 tcttcataat gatacacacc tagaagccat ttcaaaacct ttaacttctc ctcgttcaaa
      361 agattgaaac gatacatcgt cgccttatgt tgcatgcgta ccgtactccc cgcataacat
      421 aagtatcttt tccaaccgtt taacatttta acgactctct ttcgttaatt tcctttacaa
      481 aagacgaaaa atgtattttt gtcttcgcaa tactaaattt aaatgaagca atgcctctcg
      541 attaaagtga atctaattat caaaaaatgt acctttcaaa ccagtcacaa ccaacaaaag
      601 catgcctttt cacatacttt ttaagttatt cacctaaatc tttaccattt gtttctatca
      661 ctttttggta ccaatagaac gaatctttct tcaacctttc taatgtccct cgtccttcat
      721 tgtccctgtc tacataaatc agaccgtaac gctttttcat ctctcctgtc gtaaatgaaa
      781 cgatatcgat aataccccag ggtgtataac caattaaatc cacgccatct ttatcaaccg
      841 catcaatcat tgcttctata tgttctctca aataattaat acggtaatca tcatgaattt
      901 ggttgttttc caccttatct atcgcaccaa aaccattttc tacaatgaat aaagggactt
      961 gataacgttc atatagaaca ttaagcgtat aacgtagccc ttctggatcg atagcccatc
     1021 cccactcact tattttaatg tgtggatttt caactgaatt aggaagacca ctattgatga
     1081 tattattact aacaccagtc tgtgtatcat gttttacgac tgtagacatg taataactaa
     1141 agccaatgta atcgacaaca ccttctcgta aaatctcctc atctccatcc tgccatccaa
     1201 tatgataccc tttttgttcg aacatttttt tagcatagct cgggtaataa cctcttactt
     1261 gtacatcagg aaagaaatac cttaatcgat tcttaatttg tgccttcatc atatctttcg
     1321 gatgacaaga atatggataa atgggtacat aagaaatcat actaccaatt ttgaagttct
     1381 gattaatcat tttaccgatt ttgacagcct ttgcgcttgc aatcaattca ttatgtgcaa
     1441 cttgatacaa tacttcttca ggattgtcat tgtcatttaa acttacaccc gagtttgtcc
     1501 ataaaaaaat cggattaccc gtatccattt gattattaat ttcgttaaat gtcatccagt
     1561 acgtgacttt atctttgtat ctttcaaata caacttgtgc gaaacgagca aaataatcca
     1621 ctactttacg gttacgaaaa ccaccatatt cacgtgctaa atgtaatggc atttcaaagt
     1681 gtgacaatgt aataatcggt tcgatattat tcttgagtaa ttcatcaaag atattatcat
     1741 aaaattggag cccctcttca ttaggttcta actcgtcacc gttcggaaaa atacgtgtcc
     1801 aagcgattga cgtccgaagg cattgtaatc ccatttcttt aaacagggca atatcttctt
     1861 tgtaacgatg ataaaaatca atacctacgt gatttgggta atatttatcc gcttccactg
     1921 acattgttat ttctctcgtt tttctatgtg cgcctcctgt catcacatcg ataacactta
     1981 accctttccc cccttgatca tagccgcctt caaattgatt ggcagctaga gcgccgcccc
     2041 acataaagct tgctggtaat ttagacatca tccattgcct cctttatttt tttaatagtt
     2101 caaaattgat tttctttagt tatctgtttc tcttctgtaa taagaacgcc ttcaaaatct
     2161 gttgaattcg tcacatcaat agggattaca cattcatagc cattatattc aatttgcttt
     2221 tttgaatttt aaaaactgct aacctagttt gacattttca ttttctttaa aaaacttcaa
     2281 agtcttcaac gtccattata attgtaccgg ttcaatttgt acataacgat acaaaataaa
     2341 aaacgacaca tgttataata aattatctag aaattgaaat gagggcttat tgttgctgaa
     2401 atacgaaaaa atcgctcatg atattcatac attcatcaca aaccatcaat ttaaagcagg
     2461 agataaattg ccgagtgtca cgactttaaa agaaaaatat gaagtcagta aaagtacgat
     2521 tattaaagca ttagaattac ttgaacatga cggcattatt tatcaagcac aaggcagtgg
     2581 catttatgta aggaatgcga gaaatgacaa tcacattaat gtcttcaaaa caaatggttt
     2641 ttcaaaaagt ttaaatgagc accaactaac aagtaaggtt ttaaaattag aagaaatcac
     2701 tgatattcct gagacagtca tgcaagaact gaatttatca aaaggtgata gtgtttatta
     2761 tttagaaaga ctacgctatg tcgatggcaa tgtgttatgt attgaatatt cttattacaa
     2821 taaagaaatc gtcaaatatt tgaatactga aattacagaa ggatctatct ttgattattt
     2881 agaacaaaac atgcaagtta aagttgggtt ttccgatatt tattttaatg ctgatcaact
     2941 caacactaat gaagcacaac tcttaaaact cgaacccaat gacccgtgct tacgttacca
     3001 ccaaactttt tacactacta ctggtatacc attcgacgca tcagatattg ttttccatta
     3061 caaaaatgcc catttctata taccgagtaa aagatagaaa tgccgtaaaa agccggtaat
     3121 atgcacatct cgtgaatatt atcggctttt aagtactttg cttcaggtat taagttagcc
     3181 cggacacctt gaccccagtt tggatacaac aatgtcgaca tcatataaac attgtgcgtt
     3241 gcgagtttta actctgggtc aacgtgctct tgcaccgctt tgacggttcg ctgattgcat
     3301 actaaagtgc ccacgataat taaaaaaaca actatgacta aagacatgaa ctgcttgaat
     3361 cctatcattc ttttcatttt atccctcctc gattatataa tatattgtaa ttttattcat
     3421 acatttaatt tattattaac t
//
LOCUS       DANHPA010000166         3310 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.170, whole genome shotgun sequence.
ACCESSION   DANHPA010000166 DANHPA010000000
VERSION     DANHPA010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3310)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3310)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3310
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.170"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            424..768
                     /locus_tag="PTC28_002343"
     CDS             424..768
                     /locus_tag="PTC28_002343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pathogenicity island protein"
                     /protein_id="HDK5717577.1"
                     /translation="MKEVKEKVQELPDEHRLVLNVIINAPNKYITKEKMLNQLGYEKT
                     SSNERWIRRIISELSTIYAYPIGCNYSSDRRGYYMITTQEEKAQAIKSLTRLIEGSIR
                     RREAVESLVIKE"
     gene            923..1432
                     /locus_tag="PTC28_002344"
     CDS             923..1432
                     /locus_tag="PTC28_002344"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717578.1"
                     /translation="MRLKRINKTLIYRVAKITEWQLLTDFNPFYVSEKIDDINEYIES
                     MYHLNTSVVHYDSTHGISPASYPIDKLAEHIVEQKEALKRYKKKTSAMIAMLNKVIAT
                     YSLEDRKQIIKYMRTGSKYKTCGAIQRLQVDLYPIYYNWRVTCQNKRKLKRLEDRRTR
                     ASKIKQHSH"
BASE COUNT         1169 a          516 c          677 g          948 t
ORIGIN      
        1 gaaaaaaagt gtggtactgg tggtactaaa tggcaaaaca cgttggtatt actggcttta
       61 agcggtacta cattccctta aaaacagtgt tacccaagtg tgtctccaag tgtgacccaa
      121 caataaatct ataaaaatag ttccctaagt tccctataat ttataaacat atacctatat
      181 agaaagttac acatttacta tatagctttt atatacgtat atatataggt tcgaaaaaaa
      241 cagggaactt ggggaaccat ttgggtggat ctattgggag agtaggagag acgcggttcc
      301 actttttata aaatatggtg gaacaacagg ggaaccgatg tggaaccact cacataatat
      361 gcgataaaaa cgtcaggctt tatgttgcag aaccattaaa tattaaagca aggaagtgac
      421 agaatgaaag aggtaaaaga aaaggtgcaa gaattaccag atgaacaccg cctagtactc
      481 aatgtgataa tcaatgcacc gaataaatat attactaaag aaaaaatgct taatcaatta
      541 ggatatgaaa agacttcaag taatgaacgt tggatacgtc gcattataag tgaattgtcg
      601 acaatttacg cttacccgat tggttgcaac tattcatctg accgtagagg atactacatg
      661 attacaacgc aggaggaaaa agcacaggca atcaaaagtt taacaagatt gattgagggc
      721 agtataagac gacgtgaagc ggttgaaagc ctcgttatca aagagtaagg ccattaatcc
      781 gcttctttcc tagaaaaacc tagtggtaac gagtgcgtaa aagattcgtg ataaggtgca
      841 attacgaata aacatttatt agctatctgt aataccaaaa cggtacttcg cttttaaatt
      901 atcataaaaa aagggtgata tggtgagatt aaaaagaatc aataaaacgc ttatttatcg
      961 tgtggcaaaa ataacagaat ggcagttact cactgacttc aatccttttt atgtaagtga
     1021 gaaaatagac gacattaacg aatatataga atcaatgtac cacctcaaca cctcagtggt
     1081 tcattatgat tctacacatg gtatctcacc cgcttcatac cctatcgata agctagcaga
     1141 acatatcgta gaacaaaaag aggcattgaa gcggtacaag aaaaagacca gcgcgatgat
     1201 tgcaatgctt aataaagtga ttgccacata cagtcttgaa gatagaaagc aaatcattaa
     1261 gtatatgcgt acaggaagca aatacaaaac gtgtggtgcg attcagaggc tacaggtaga
     1321 tttgtacccg atttattata attggcgtgt aacgtgccag aataagcgaa aattgaagcg
     1381 gttggaagat aggcgcacac gtgccagcaa gattaagcaa cacagtcatt aagatgttac
     1441 aagtgtattt atggatacgc ttgttgtagt cataatataa gtttatgtat gctctttccg
     1501 tattgtacgg ttagagcttt ttaatttgat tggctcgaat ttgagcatat taacttatta
     1561 cggttataca tagtggtgag acacaagagc tgacagaacg aatcattacg tcaggtcaat
     1621 aataagcatg ttaaaaaggg gtcggtaaaa tacagatagc ccaattctgt acctactcaa
     1681 aaatgagtat ctttagtgtt attttactac aaactactac atatctgtca gtgcttcata
     1741 aacgctcata gaagcacggt aacgtaaaaa ggataaatac cattaatttt tatttacaag
     1801 cctaaaatgg acgtaatttg aatgaacatg acaggtttgg gacaaatata atgtgtgtag
     1861 gttggtattt agtaatatgt gaatgttgaa gcggtagaca tatgaggggt gaagtccttt
     1921 aaatgctaac aaatgttaag gtttcagaag agtaaggggg gaatgattcg ttccgtcgta
     1981 aatcatgatg ttagacaatt caaaattggt tagtcaaaaa agtctaatca actaacgcac
     2041 taagttggtg cattatcaga acgtaatttt acgttttgct acataccagt acatttaata
     2101 ttctttaatt ttgagatgat ttgaaaagca ggctttaaac aaccaaaagt aataaacatg
     2161 atcattgagg ggcaaacaac ttataagaat actactgaac aattaaagtt tacaacaggg
     2221 cccaagtttg gactttgcaa aattacacag ctcaaatttg ggtcctgacc taagtaccct
     2281 aattgagtac gcagaattca cttttaaggc gtgtaaaagt atacggtcaa aaaagggcgc
     2341 gtactattat cctaaaatgt ctaacagcta atataagcaa cacacatatt tacctacgtg
     2401 gtcaatttgg ctacataggt gacaacatac tgttaataag tgaatatgtg tttaaaaata
     2461 acaaggttat acaaaggtac ggtgacaata tacgttggat aagtggttgc atattaagta
     2521 caaagtcaaa aaagactaca tattttggtt tcttaatagt cggaaatgaa tatgaagtta
     2581 ttcaaaaatg agcaacagct ttttagcata gtaaagggag cctcgagttg gggcgtcctt
     2641 tgtggttctc cacttttggg gaaactaaac aacacacagt gcattttaat ggcaagttaa
     2701 tgaccgttct ggtgaatgtt ccgcttcaaa atagtgtgta ccaactatca ttcccaacat
     2761 aatgggaaag tcataggaaa ggtttaacaa ggtgaggggg tcgtaaatca cgacgttatg
     2821 tgtaggctac accaaccata ttgctattgt ggcaatgtgg atattaaata aagggagata
     2881 tttaagaaga tgagtgggcg ccgttctatt aagtgactta cctcacgccc gtcttttaat
     2941 gtgggggact tgtcaccact taggcaagtg aatttgttgt agtaggacaa acggacaaat
     3001 ttgtcttgtt gtgattttat gtgatgctcc atattttaga cagtgggttg atctaaaaat
     3061 acggtataag tgaagtgtgg tgaagcagtt ggttattgta ggcacctttt gaatacgttc
     3121 aaataaaaaa gtcatagcat tttaacgcta taccatgtta ccgatatggg aatatgccct
     3181 gtatttatag gttctcacgc atgcaggcat tgaatacgtt tttgaatacg ttatttaata
     3241 agtaatgtaa atcgatagga agtatatacc tataaaaaca ctgatatatc aatcgttata
     3301 ggctattaca
//
LOCUS       DANHPA010000167         3260 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.171, whole genome shotgun sequence.
ACCESSION   DANHPA010000167 DANHPA010000000
VERSION     DANHPA010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3260)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3260)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3260
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.171"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..363
                     /locus_tag="PTC28_002345"
     CDS             <1..363
                     /locus_tag="PTC28_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HDK5717579.1"
                     /translation="RNRPGTFKEIITEINQVTRGWINYFGRGFIRVFLETTQSWLNRR
                     LRQLILKRWKRVRTKYKMLRQYGLDHRSAMKIAQSRKKYWRLSNTHEVHRALTTKQLY
                     KWGLIPLAQLAELAYARY"
     gene            complement(442..1767)
                     /locus_tag="PTC28_002346"
     CDS             complement(442..1767)
                     /locus_tag="PTC28_002346"
                     /EC_number="1.8.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-disulfide reductase"
                     /protein_id="HDK5717580.1"
                     /translation="MKKHIIVVGAVAGGATSASQIRRLDKDSRITVYEKDSFMSFANC
                     GLPYYLGNVIEERDDILSTNPEKFKAYKDIDVKVKHEVLKIDDKKQTVTVKNHFTGET
                     FEDAYDALVLSPGARATQLNFDVPHLFTLRNMDDTDQIDTYIRQYNVKTVLIVGAGYV
                     SLEMVENMHHRGLHPTLIHRSEAVNKLMDQDMNSVIFDALNQYNIPYRLNEEIKSIDG
                     HTVTFTSGAVEDYDLIIAGVGVRPNSEFIQNSGIQLDAKGYIPVNDKFETNIPNIYAV
                     GDIVTSFYRHVDLPAHVPLAWGAHRGASIIAEQIAGHPEVTFKGYVGANIVKFFDYTL
                     ASTGISPQELKNFDYQMVEVNLYTHAGYYPGNSKVHLRAYFDKETRRILRAAAVGQKD
                     VDKRIDVLTMALMHQATIDELTEFEVAYAPPFAHPKDLINMLGYKARNL"
     gene            complement(1798..2622)
                     /locus_tag="PTC28_002347"
     CDS             complement(1798..2622)
                     /locus_tag="PTC28_002347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDK5717581.1"
                     /translation="MKQHLICLDLDGTLLNDEKEIPEYTFRVLKALQQQGHAIIIATG
                     RPYRASQRYYNELGLDTPIVNFNGAFVHHPYDETFPVQHHRLDEGLATSIIETLKNMK
                     VKNMIAEVKDCVFLDQPDPRLFEGFTMGNPVTKVGDLRENLNEDPTSLLIEAEEAMIP
                     RVKQVLTRFYAENIEHRRWGAPFPVIEIVKKGISKAVGIDIVKDCLQIEHDHIIAFGD
                     EDNDLEMIKYATHGIAMGNAIDELKHVAKETTLSNNEDGIGIYLNRFFNLNMPKDK"
     gene            2736..3044
                     /locus_tag="PTC28_002348"
     CDS             2736..3044
                     /locus_tag="PTC28_002348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002465312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sulfur cluster assembly factor"
                     /protein_id="HDK5717582.1"
                     /translation="MEEALKDSILGALENVIDPELGIDIVNLGLVYKVDLDDDGLCTV
                     EMTLTSIGCPLGPQIVDQVKTVLAELPEIQDTEVNIVWNPPWNKDMMSRYAKIALGIS
                     "
BASE COUNT          968 a          618 c          626 g         1048 t
ORIGIN      
        1 cgaaatagac ctggtacctt taaagagatt atcactgaaa ttaaccaagt gacgcgaggt
       61 tggataaatt actttggtag aggttttatc agagtatttc ttgaaaccac acaatcttgg
      121 ttaaaccgcc gacttagaca actcattctt aaacggtgga aaagagttag aacgaaatat
      181 aagatgttgc gtcaatatgg tcttgaccat agaagtgcaa tgaaaatcgc acagtctcgc
      241 aagaaatact ggcggttatc aaacacgcac gaggttcatc gtgcacttac aacaaaacaa
      301 ctctacaagt ggggattaat accattagcc cagcttgcag agttggctta cgcaagatat
      361 tgaaccgccg agtacggaac cgtacgctcg gtggtgtgag aggacgagta gtcaattaat
      421 ggctattctc ctactcgatt cttatagatt gcgcgcttta taacctaaca tattaattaa
      481 atctttaggg tgtgcaaatg gaggcgcata agcaacttca aattctgtca attcgtcaat
      541 tgttgcttga tgcattaatg ccatagtcaa gacgtcaata cgcttatcaa catctttttg
      601 tcccactgcg gctgctctta aaatgcggcg tgtctctttg tcaaagtatg ctcttaaatg
      661 gactttactg ttgccagggt aataaccagc gtgtgtataa aggttgactt ccaccatttg
      721 ataatcaaag ttttttaatt cttgaggtga gattcctgta cttgctaagg tgtaatcgaa
      781 aaatttaaca atattggcac cgacgtaacc tttaaatgtc acttctggat gacctgctat
      841 ttgttcagcg atgatacttg caccgcgatg tgcaccccaa gcgagtggta cgtgtgcagg
      901 gaggtcaacg tgacgataaa agcttgtgac aatatcacca actgcataaa tgtttggaat
      961 attcgtttca aatttgtcat tgactggaat atagcccttt gcatcaagtt gaataccaga
     1021 attttgaatg aactctgagt tagggcgaac acccacgcca gcaatgatta aatcatagtc
     1081 ttcaacagca cctgaggtaa atgtcactgt atgcccatca atagacttga tttcttcgtt
     1141 taaacggtat ggaatattgt actggttcaa cgcatcaaaa atgacactgt tcatgtcttg
     1201 atccatcagt ttattcactg cttcagaacg gtgaatgagt gttggatgca gaccgcgatg
     1261 atgcatattt tctaccattt ccaagctgac gtaccccgca ccgacaatta aaacagtttt
     1321 cacattgtac tgacggatat atgtatcaat ctggtcagta tcatccatat ttcgtaacgt
     1381 gaaaagatgt gggacatcga aattaagttg agttgcacgt gcaccaggac tcaatactaa
     1441 agcatcataa gcgtcttcaa atgtttcacc tgtaaaatgg tttttgactg tcactgtctg
     1501 ttttttatca tcgattttga gcacttcatg ttttactttt acgtcaatgt ctttataagc
     1561 tttaaacttt tctggatttg tcgataaaat atcgtctctt tcttcgatga catttccaag
     1621 gtaataaggt aaaccacagt tcgcaaagct cataaaacta tctttttcat atactgtaat
     1681 acggctgtct ttgtctaaac gtcgaatttg gcttgcactt gttgcgccac cagctactgc
     1741 accgacgaca ataatatgct tcttcatgtt aatatctcct ttttctatct cttattttta
     1801 tttatcttta ggcatattta aattaaagaa acgattcaaa taaatcccga taccgtcttc
     1861 attattagat aatgttgttt cttttgcgac atgtttcagt tcatcgatgg catttcccat
     1921 tgcaatacca tgagtcgcat acttaatcat ttctaaatca ttatcttcat caccaaatgc
     1981 aataatatgg tcatgctcga tttggagaca gtctttcacg atatcaattc cgactgcttt
     2041 actgatgccc tttttgacaa tttcaatgac agggaaaggg gcgccccaac gacgatgttc
     2101 aatattttca gcatagaagc gtgtcaacac ttgtttcaca cgtggaatca tggcttcttc
     2161 tgcttcaatt aatagtgaag tcggatcttc atttaagttt tcgcgaagat cgcccacttt
     2221 tgttacagga ttgcccatgg taaagccttc aaaaagacga gggtcaggtt ggtctaaaaa
     2281 gacacaatct ttcacttcag caatcatatt tttgactttc atatttttca aagtttcaat
     2341 aatgctcgtt gcaagtcctt catctaaacg atggtgttga actgggaatg tctcatcata
     2401 agggtgatga acaaatgcgc cattaaagtt aacgataggc gtatccaatc caagctcgtt
     2461 gtagtaacgt tgacttgcac gataagggcg gcctgttgca atgatgatgg catgcccttg
     2521 ttgttgtagt gcttttaaca cacgaaatgt atattctgga atttcttttt catcatttaa
     2581 aagtgttcca tctaaatcca aacaaattaa atgttgtttc attcatactc tccttaatac
     2641 caagtttcag tgtattcata tcatagcatt ttattgtgga aaagtgggga ttttgttata
     2701 ttgttactag tgaaattgaa aatgaggtga tacagatgga agaggcactt aaagatagta
     2761 ttttaggcgc gcttgaaaat gtcattgacc ctgaattagg gattgatatt gtcaacttag
     2821 gtcttgtata taaagttgat ttagatgatg atggtttatg tactgtagaa atgacactca
     2881 cttcaatcgg ttgtccatta gggccgcaga ttgttgacca agttaaaaca gtattagcag
     2941 aacttccaga gattcaagat accgaagtga acatcgtttg gaatccacca tggaataaag
     3001 acatgatgtc acgttatgct aaaattgcgt taggtatcag ctaatatttt gaagtagtta
     3061 aaggggcttt ctcaattgtg aatgcaattt tgaaggtctt tttatttacc tatggggagc
     3121 ataccaactt actgcactct cccatgacac cttgaagtga cagcttaata gcatcattgg
     3181 aagtgtagct ataacgatgt aaaaaaattt tagacacgta ataaaacgct tacatgaatt
     3241 ttgcgaatat aattgcacga
//
LOCUS       DANHPA010000168         3248 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.172, whole genome shotgun sequence.
ACCESSION   DANHPA010000168 DANHPA010000000
VERSION     DANHPA010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3248)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3248)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3248
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.172"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..1910
                     /gene="ltaS"
                     /locus_tag="PTC28_002349"
     CDS             <1..1910
                     /gene="ltaS"
                     /locus_tag="PTC28_002349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polyglycerol-phosphate lipoteichoic acid
                     synthase LtaS"
                     /protein_id="HDK5717583.1"
                     /translation="FTFFLLMVLTIALKTYFAYYVDLSLGVKGLTQNLILLMNPYSLV
                     ALILSVFLFFKGRKAFWFMFVGGFLLTFLLYANVVYFRFFSDFITFSTLNQVSNVDSM
                     GGAVSASFQWYDFVYFLDLIVYLFVLVFKRKWLSRNVFQKKFVPVVMATAIALFFLNL
                     AFAETDRPELLTRTFDHKYLVKYLGPYNFTVYDGVKTVQNNQQKALASEDDLTEVLNY
                     TKQKQATPNMEYYGKAKGKNVIKIHLESFQTFLINKKIHGEEVTPFLNKLSSGNEDFR
                     YYPHFYHQTGQGKTSDAEFTMDNSMYGLPQGSAFSLKGDNTFQSLPAIMHQQQGYTTN
                     VMHGDYKTFWNRDQVYRHFGIDKFYDATYFDMSPENLENLGLKDKEFFKEAADYLSKE
                     KQPFYSHLITLTNHYPFTLSDEDATIAKGDTGNSTVDGYIQTARYLDESLEQFINDLK
                     ERGLYDDSVIMIYGDHYGISENHNKAMSQLLGEEITPAKFNDLNATGFWLKAPGVEPK
                     VDDTYAGQVDVMPTLLHLLGIDTKNYLMFGTDMLSKDHKEIVPFRNGDFVTRNYKYVN
                     GKAYSNRDNQPLETPPADLDKDKKQVQHDLEMSDKVLNGDLFRFYKNPDFNKLNPADY
                     KYPTGPKANQK"
BASE COUNT         1073 a          585 c          576 g         1014 t
ORIGIN      
        1 tttttacgtt tttcctactg atggttttaa caatcgcatt aaaaacgtat tttgcttatt
       61 atgtggactt atcacttggc gtgaaaggtt taacacaaaa tttaatttta ttaatgaacc
      121 catatagttt agttgcactt attttaagtg tattcttatt ctttaaagga cgtaaagcgt
      181 tttggttcat gtttgttggc gggtttttgc tcaccttttt attatatgcc aatgtcgtgt
      241 atttccgctt tttctcagat ttcatcacat ttagtacatt gaaccaagtg agcaatgtag
      301 actccatggg cggtgcagtg agtgcatcat tccaatggta cgactttgtt tacttccttg
      361 atctgattgt gtacttattt gtactcgtgt tcaaacgtaa atggttgagc cgcaatgtat
      421 ttcagaaaaa gtttgtaccc gttgtcatgg ctacagcaat cgcgttattc ttcttgaact
      481 tagcgtttgc agaaacagac cgacctgaat tattaacgcg tacatttgac cataaatatc
      541 ttgtgaaata cttaggacct tacaacttta cagtatatga tggtgtcaaa acagtacaga
      601 acaatcaaca aaaggcactc gcttctgaag atgatttaac agaagtattg aattatacaa
      661 aacaaaaaca agctacaccg aatatggaat actatggaaa agctaaaggt aaaaatgtca
      721 ttaaaatcca tttagaaagc ttccaaacat tcctaattaa taaaaaaatt catggtgagg
      781 aagtgacgcc gtttttaaat aaattgtcgt caggtaatga ggactttaga tattacccac
      841 atttctatca ccaaactgga caaggtaaaa cgtcagacgc tgagttcaca atggacaaca
      901 gtatgtatgg tttacctcaa ggttcggcct tttcattaaa aggtgacaat acttttcaat
      961 ctttaccagc tattatgcat caacaacaag gctatacaac aaatgtcatg cacggtgact
     1021 ataaaacatt ttggaaccgt gaccaagtat acagacattt tggtatcgat aagttttatg
     1081 atgcaacata ttttgacatg tctccagaaa acttagaaaa ccttggatta aaagataaag
     1141 agtttttcaa agaggcggcg gattacttat ctaaagaaaa acaaccgttc tattcacatt
     1201 tgattacgtt gacgaaccat tatcctttta cattaagtga tgaagacgca acgattgcaa
     1261 aaggtgacac aggtaactca acggtcgatg gttacattca aacagcacgt tacttagatg
     1321 agtcgttaga acagttcatt aatgacttga aagagcgtgg tctgtacgat gattcagtca
     1381 ttatgattta cggtgaccat tatggtatct cagaaaatca taacaaagcg atgtcacaat
     1441 tattaggtga agagattaca ccagcgaagt ttaatgactt gaatgcaacg ggtttctggt
     1501 taaaagcacc aggggttgag cctaaagtgg acgacacgta tgcaggtcaa gttgatgtga
     1561 tgccaacatt acttcacttg ttaggtattg atacgaaaaa ttatctcatg tttggtacag
     1621 atatgttatc caaggaccat aaagaaattg taccattccg taatggtgat ttcgtgacga
     1681 gaaattataa atatgtcaac ggtaaagcct acagtaacag agacaatcaa ccgttagaaa
     1741 caccaccagc agatcttgat aaggacaaaa agcaggtaca acatgactta gaaatgagtg
     1801 ataaagtctt gaatggagac ttattccgat tctataaaaa tcctgatttc aacaaattga
     1861 acccagcaga ttataaatat ccgacaggtc caaaggcaaa tcaaaaataa aatgttatga
     1921 tagggaagtg tacaaattag tgcatttccc tgttttttag gttgtatata tttggttgtg
     1981 tatttttaac ggttggtgag agatttactg cccgttttta aattttgaaa gacctgttta
     2041 tttaaatttg aagaagcatc gtttttactt taaagcttgt caacaaacct ttataactaa
     2101 aacaccctat attcaacccc gaagtctcaa ataaggtcaa acgcttgatg acgcggaagc
     2161 taactaaatt cacatctgaa aaagatgtcg ctaaaagtct atgtgtatca ccttcaactg
     2221 ttcattgcca tttaaaagag gtgagtaatt tgtaaagaca tacgcacatg atgctttacc
     2281 tgagcactta gcttttgacg aattcaaatc aacgaaagat atcgaaggac caatgagctt
     2341 tatttactgt gatagtgtaa cccatgatat catcgacatt ttacctaatc gttgcaaaca
     2401 ttcatcaaat atttgccctg aacctcaaat actatgcatc atcctcattt aacaaatggc
     2461 ccgattgaaa ggattaataa taaaacaaat gtgtgtctta tagttataga aatttctgga
     2521 atcttaatca tttctaagat acttgtaagt gcatataaaa aacggaatgg gtcttaaaaa
     2581 tttttgatgc tattgttgca atatttttat taaacttgtc cgcattacga tttgtggttt
     2641 taattgtcat catggtttcg ctttcctaga gccggccctt caactcaatt cggcttgatt
     2701 gaagccaaat tggattttag gagcagtaca gaaacctcat atgcaacaag atttcgttgt
     2761 actgccttgc atggctgatt agacttctca aaagtgaaaa cactgagaag tcagcccgct
     2821 actgcgataa acgcctccca ccattaaagt aaagaggcga ctgtcaacag tatgcacgtt
     2881 ccccctcagg cgtctcagcc atctgggtaa tcctatatca atacagcgaa actgagtgca
     2941 agattatgaa atccagaaaa caatggcatc attttttata cacattcacc ccttattttc
     3001 gaaggatcaa tcattattaa tcgatatcag tctataaata gaagcagaga ttaggaaacc
     3061 ataatgtctc agtgccgtta ttgtctcacc aaccgacgtt gacaaagaac ccgtctcaat
     3121 cgcctctatc gttggaaagt attttagatt aaaacatttc ctttcataaa aagaataaac
     3181 ttgtccatat ttatcttggc gtttatatat gaaatgcagc attttcattt cgccattttc
     3241 ctacattt
//
LOCUS       DANHPA010000169         3207 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.173, whole genome shotgun sequence.
ACCESSION   DANHPA010000169 DANHPA010000000
VERSION     DANHPA010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3207)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3207)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3207
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.173"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(6..512)
                     /locus_tag="PTC28_002350"
     CDS             complement(6..512)
                     /locus_tag="PTC28_002350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002494354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2'-5' RNA ligase family protein"
                     /protein_id="HDK5717584.1"
                     /translation="MILGLALIPSKDFQSEVNAYRKRYDKHYTMIQPHITIKSNFEID
                     EKDLDQVKAEIEKRLEGAQQAEVYVSKASNFAPITNVIYFKVEKNAALEDLFNRFDGE
                     DFYGKSEHAFVPHFTIAQGLTSQEFEDIYGQVHLAGIEHKEIIDTLSLMHFKEDVEEW
                     EEIATFSL"
     gene            complement(566..1300)
                     /locus_tag="PTC28_002351"
     CDS             complement(566..1300)
                     /locus_tag="PTC28_002351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HDK5717585.1"
                     /translation="MTTFNPGEVTVTHLQSDYLEREITLSVYLPKDYSDLYKSKVIFC
                     FDGRDFLRYGQLHRVYEKLRKNGEVERAIIVGLHYQNVKMRHMEFHPEGEKAAQTVQA
                     VANEILPWIDENFATYKVGNARILLGDSLAGSIALLTALSYPRVMSQVGLLSPHYDDI
                     VKLIFDRCQFKSELNIWHAVGKEEIDFKLPTSGERADFLTPNRTLKGLFESKQMTYYY
                     EELDGGHNWKTWQKELPKMLTYFLGN"
     gene            complement(1403..2974)
                     /locus_tag="PTC28_002352"
     CDS             complement(1403..2974)
                     /locus_tag="PTC28_002352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HDK5717586.1"
                     /translation="MLETIVGWLNDIVWSKPLVYGLLLTGVAFSLMSRFLQVRHFKEM
                     IRLMFQGEKSPTGISSFQAIALSLAGRVGTGNIVGVSTAIFIGGPGAVFWMWATAFLG
                     AGTAFIESALGQIYKQEEDGEYRGGPAYYIEKGIKGKFGKVYGLVFAIVTIISVGLLL
                     PGVQSNAIASSMHNAFGIPAWVIAVVLVVVLALIIFGGVKWIAKVATAVVPFMAIIYI
                     LMAIVIIVLNIQEVPALFALIFKSAFGMEAAFGGIIGAMIEIGVKRGLYSNEAGQGTG
                     PHAAAAAEVSHPAKQGLVQAFSVYVDTLFVCTATALIILISGTYNTTDGTVAADGMPS
                     LLKNGEIFVQNTDGTKDYSGTAMYAQAGIDKALQGSSYHFDPNFSGFGSYFIAIALFF
                     FAFTTILAYYYIAETNVSFLTNRIAKNQNQLWRNVTRLVLIAATAYGAVKTADIAWAM
                     GDLGVGLMAWLNIIAIWILYRPAMHALKDFERQKKEKGTGKTAIYRPDPKEIPTATFW
                     LEDYPKRLKEEDIQP"
BASE COUNT          985 a          707 c          502 g         1013 t
ORIGIN      
        1 tcatattata atgaaaaagt agcgatttct tcccattctt ctacatcttc tttaaaatgc
       61 atcaatgata atgtatcaat gatttcttta tgttcaatgc ctgctaaatg cacttgacca
      121 tagatatctt caaactcttg gcttgttaaa ccttgtgcaa ttgtgaagtg tggtacaaat
      181 gcgtgttcag atttaccata aaaatcttcg ccatcaaaac ggttgaataa atcttctaat
      241 gctgcatttt tctcgacttt aaaataaata acgtttgtaa tcggtgcaaa gtttgatgct
      301 tttgatacat aaacctctgc ttgttgcgcc ccttctaaac gtttttctat ttcagcttta
      361 acttgatcaa gatctttttc atcaatttca aaattactct taatcgtaat atgaggttga
      421 atcattgtgt agtgcttatc ataacgttta cgataagcgt tgacctcgct ttggaaatct
      481 tttgacggaa ttaacgctaa tcctaaaatc atttgaattc ctcctttgta ttcgcttact
      541 tttattatag caaattttct tacaactagt tacctaaaaa gtaagttaac atttttggca
      601 attctttctg ccaagttttc caattgtgcc caccatctaa ttcttcgtag taatatgtca
      661 tttgtttcga ttcaaataaa ccttttaatg tacgattcgg tgttaagaag tctgctcgct
      721 caccacttgt tggcaattta aaatcaatct cttctttacc taccgcatgc caaatgttta
      781 attctgattt aaactgacaa cgatcaaaaa tgagtttcac aatatcatca taatgcggac
      841 tcaacaaacc gacttgactc atcacacgtg ggtacgaaag tgcagttaac aatgcgatac
      901 tccctgctaa actatcacct aataaaattc tcgcgttccc tactttatat gttgcgaaat
      961 tctcatcaat ccacggtaaa atctcatttg cgaccgcttg aaccgtttgt gcagcttttt
     1021 cgccttctgg atggaattcc atatgacgca tcttcacatt ttgataatgc agtccgacga
     1081 taattgcacg ctcgacttcc ccattttttc ttaatttctc atatacacga tgaagttgac
     1141 cataccttag aaagtcacga ccatcaaaac aaaaaattac tttcgattta tataaatcag
     1201 aataatcttt cggcaaatag actgataatg taatttctcg ctctaagtag tcgctttgta
     1261 gatgtgtgac cgttacttca cccggattaa atgtagtcat aaaaagcgcc tcctcatacg
     1321 aattaatctc attgtatcag gagacgcatg ctgtgttaat ttataaagct tgatttgacg
     1381 ctattttgtc taatttgtga cgttacggtt gaatatcttc ttctttcaaa cgtttcggat
     1441 aatcttctaa ccagaacgta gcagttggaa tctctttagg atctggacgg taaatcgcgg
     1501 ttttgcctgt ccctttttcc ttcttctgac gttcaaagtc ttttaatgca tgcatggctg
     1561 gtcgatataa aatccaaatc gcaatgatgt ttaaccatgc catcaatccg acacctaagt
     1621 cacccatagc ccatgcgatg tcagccgttt tcactgcacc gtatgcggtc gctgcgatta
     1681 agacgagacg tgtcacatta cgccataatt ggttttgatt tttcgcaata cgattcgtta
     1741 agaaactaac attcgtttca gcgatgtagt aatacgctaa aatcgttgta aaggcaaaga
     1801 agaataatgc aatcgcgata aagtacgaac caaatcctga gaaattcgga tcaaagtggt
     1861 aactcgaacc ttgtaacgct ttatcaatcc ctgcttgtgc atacatcgca gtaccagagt
     1921 aatctttcgt accatccgtg ttttgcacga aaatttcacc attttttaat aaactaggca
     1981 taccatcagc cgcaactgtt ccatctgttg tattgtatgt accagaaatt aaaataatta
     2041 acgctgttgc tgtacaaacg aataaagtat ctacgtaaac agaaaatgct tgaacgagac
     2101 cttgcttcgc tggatgagac acttctgctg ctgccgctgc gtgaggtcct gtaccttgac
     2161 ctgcttcatt tgaataaagt ccacgtttca caccaatctc aatcattgca ccgataatac
     2221 caccaaaagc agcttccata ccgaatgctg atttaaagat aagcgcaaac aatgcaggta
     2281 cttcttgaat attaagtacg ataatgacaa tcgccattaa aatataaata atcgccataa
     2341 atggaacaac cgccgtcgct actttcgcaa tccattttac gccaccaaaa ataatgagtg
     2401 ctaaaacgac tacaagtacg actgcaatca cccacgcagg aataccgaac gcattatgca
     2461 ttgaacttgc aatcgcattt gactgaacac ctggcaacaa tagaccaact gaaataatcg
     2521 tcacaatcgc gaagactaaa ccgtaaacct tcccaaattt acctttaatc cctttttcaa
     2581 tataatatgc cggacccccg cggtattcgc catcttcttc ttgtttataa atttgaccta
     2641 gcgctgactc gataaaggct gttcctgcgc ctaaaaatgc agtagcccac atccaaaaga
     2701 ctgcaccagg acctccgatg aaaatcgcag tcgatacacc aacgatattc cctgtcccca
     2761 cacgacctgc taatgataac gcaatagcct gaaaactaga aatcccagtt ggtgactttt
     2821 cgccttgaaa catgagacga atcatttctt taaagtgacg gacttgtaaa aaacgactca
     2881 tcaaactaaa tgctactccc gttagtaaaa gcccatagac taatggctta ctccaaacta
     2941 tatcattgag ccatcccaca atcgtttcta acataaacat tccccctttt tcttctgtac
     3001 ccttttttat aattttctga taaatatggt ataagtatac acagttaaaa aattccgtgc
     3061 aactcttttt taagaacaac acaccatacg aaaatgcaaa tcattcaagt attggttaaa
     3121 ttttttcttt taacgtgatt ctgattggga tatactgtaa tcagtgttct tatagaagga
     3181 ggaaacaatg tatgacaaat aaagtgt
//
LOCUS       DANHPA010000170         3186 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.174, whole genome shotgun sequence.
ACCESSION   DANHPA010000170 DANHPA010000000
VERSION     DANHPA010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3186)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3186)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3186
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.174"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            12..854
                     /locus_tag="PTC28_002353"
     CDS             12..854
                     /locus_tag="PTC28_002353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat protein"
                     /protein_id="HDK5717587.1"
                     /translation="MRKLFVFGLSCFLICFILGTAVWFGFEKKKQSVEKIDKTFEKNA
                     INQIVINVDSTHIKMVPSDDFHISYEGKQDMKVSKQSRVLTITEMNRSGFRTPNLNPF
                     NNLEGQLEIGIPQNQVKEIDLTSNLGAIDIVDVNVEHATIWNGDSGELNIHNSELTHS
                     KFSANETLVNIENSRIDKSEFNIKQGKINGEKTLLKNSIFKLNSGDIHLKEMQTDCDF
                     KSSVKDGNIYLGYRQPPTDVMLSLNPENGKAIINNDEIKKGKNGTGTHQIELYTTRGD
                     ITVD"
     gene            complement(955..1998)
                     /locus_tag="PTC28_002354"
     CDS             complement(955..1998)
                     /locus_tag="PTC28_002354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="linear amide C-N hydrolase"
                     /protein_id="HDK5717588.1"
                     /translation="MQQVSSDVSTFRGTHYDYGVATGQWLQQTAMLKNREKEWKKRVP
                     RFDIDVEKTYQIFQQFAPKIWDEIQGIQDVLNIPTRQAILNFAHYRFTTLPESGCSVF
                     VGGDYLVRNYDYHPATYDARYQLFQPTDGGYAQIGPMSRTTGRMDGMNEHGLVMAYNF
                     MHRKKPANGFVCYMIGRLVLEYCRNVEEAIQFLNVLPHRSSFSYIVQDKTGAHAIVEV
                     TPRSIDVRYDTTCTNHFKLLTHENRNYTKESEERLARLDAQVQSSEPSRFDIFKRFND
                     PQYELYSKLFKSWSGTIHTTMYEPRQLYAWITLGENQPPIKFDFGAWLNGQPIDKTIL
                     TGHLDTDIHFATH"
     gene            complement(2710..3099)
                     /locus_tag="PTC28_002355"
     CDS             complement(2710..3099)
                     /locus_tag="PTC28_002355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717589.1"
                     /translation="MPYISLVSSWKNNDIDKIEDMLDDRVAAYYVNELGEPQSLTKSN
                     VIDMLRKRMNQISKMKDTQWNFEMIHRAQINDDQMIIFYVYSVENPDYPKTTKTLVAI
                     TFGDTQSLNHRIKTIYITTNVTEIHST"
BASE COUNT         1003 a          533 c          628 g         1022 t
ORIGIN      
        1 acatcacagt catgagaaag ttatttgtat ttggactcag ttgcttttta atttgtttta
       61 ttttgggaac agccgtgtgg tttggttttg aaaagaaaaa acaatctgtt gagaaaatcg
      121 ataaaacctt tgaaaaaaac gcaatcaatc aaattgtaat taacgttgat tcaacgcata
      181 taaaaatggt gccgagcgat gactttcata tctcgtatga aggcaaacaa gatatgaaag
      241 tttcaaaaca aagtcgcgtg ctgaccatta ctgagatgaa tcgctcaggt tttcgaacgc
      301 cgaatctcaa cccctttaat aatttagaag ggcagcttga aatcggtatt cctcaaaatc
      361 aagttaaaga aatcgatctc acttcgaatt taggtgcgat agatatagta gatgtcaatg
      421 ttgagcatgc aacgatttgg aatggtgaca gtggagaatt gaatattcat aatagtgagt
      481 tgacccattc taaatttagc gccaacgaaa cgcttgtcaa tattgaaaac agtcgcatag
      541 ataaaagtga attcaatatt aaacaaggaa aaattaacgg tgaaaagacg ctactcaaga
      601 acagtatttt taagttgaat agtggtgata ttcacttgaa agagatgcaa acggattgtg
      661 atttcaaaag ttcagtgaaa gatggcaaca tttacttagg gtatcgtcaa ccgccaactg
      721 acgtgatgct gtcgcttaat cctgaaaatg gtaaagctat catcaataac gacgagatta
      781 aaaaaggaaa aaatgggaca ggtacacatc aaatagaact ttatacgaca cgtggcgata
      841 ttactgttga ttaggcaaat aatacagagg cttggatatg aggtgatccg agccctgtat
      901 tttttatatt gtgacgggga tttgacatag aaattttatg tcccatcccc aacattaatg
      961 tgtagcaaag tgaatgtcag tatcgaggtg acctgttaat atagttttgt caattggctg
     1021 gccattaagc caagcgccga aatcaaattt gatgggcggt tgattttcac ctaaagtgat
     1081 ccaggcataa agttgtcgtg gttcatacat cgttgtgtga atcgtgccac tccaactttt
     1141 aaataattta ctatagagtt catattgtgg gtcattaaaa cgtttgaaaa tatcgaaacg
     1201 tgatggctca gatgactgga cttgggcatc tagccgcgcc aaacgttctt ctgactcttt
     1261 ggtatagtta cggttttcat gtgttagtaa tttaaaatga ttcgtacaag tcgtatcgta
     1321 acggacatca atgcttctcg gtgtcacttc aacaatggcg tgtgcacctg tcttatcttg
     1381 cacaatatag ctgaatgagc ttcgatgggg caatacattt agaaattgaa tcgcttcttc
     1441 gacattacga caatattcta atactaaacg cccaatcata taacacacaa agccattcgc
     1501 aggtttttta cggtgcataa aattataagc cataactaat ccatgctcgt tcatcccatc
     1561 catacgccca gttgttcgtg acatcggacc aatttgcgca tagccaccat cagtgggttg
     1621 gaacagttga taacgtgcat cgtatgtggc cggatgataa tcgtaattgc gtactaagta
     1681 atctcctcca acaaataccg agcaaccact ctcaggtaat gtcgtaaagc gataatgtgc
     1741 aaagtttaaa atcgcttgtc ttgtcggtat gtttaacaca tcttgaatcc cttgaatttc
     1801 atcccatatt ttaggagcga actgttggaa aatttgatag gttttttcta catctatgtc
     1861 aaaacgaggg acgcgctttt tccattcttt ttctctattt ttcaacatgg cagtttgttg
     1921 tagccattga ccggtagcaa caccataatc ataatgtgta ccacgaaaag ttgaaacgtc
     1981 tgatgatact tgttgcatgt gtattcatcc tttctgacat ctgtataaca taatttgtta
     2041 ataggttgta atatttcctt aatggtaatt catacactat tttaatatac ttattttatc
     2101 attataacaa ttcgaaaagt atattaaatc aatagggggg gaagtatatg tgggaatact
     2161 attttaaagc taagcgttgg ttctatagaa atttcaccaa ataactgctg ttttgaagtt
     2221 tttacaaata agtttaacat gcatacacga taacacgatg cgtatatgaa agcgtttcgt
     2281 ataggtttta aatataaata acacacgagc aaaaacgaga acgaaatgaa ataatttcga
     2341 tatgagtagg ttacagtgag aagtcaataa ggatatttac ttgagggaac tgaggtatgg
     2401 tacgtatctc ggttcttttt tatgaatgaa cccgtgtgtc acaacaaaag tggggcagaa
     2461 atctcccttc aaaagatggg gccgtcccac tttaacatgt tgaacgataa ctgaaaatcc
     2521 tgtgtatcgt cgcgctttca gtccaattta cgccaatgaa atgaagtgag aaagagatgt
     2581 tgtgcatgtg aaagattcaa ttgctgaact gcatcgtgat tgaaaggagg tctgatgtat
     2641 acgtcttgca ctcaccttat tcagataaat acagtttgaa gtgatggcgt caagcattca
     2701 atgatggcgt tatgttgagt ggatttctgt gacatttgtt gtgatgtaaa tcgttttaat
     2761 acgatggttg agtgattgcg tgtctccaaa tgttatggca acaagtgttt tcgttgtttt
     2821 tggataatct ggattttcta cggagtatac ataaaatata atcatttgat cgtcgttgat
     2881 ttgtgcacga tgaatcatct caaaattcca ttgtgtatct ttcattttgg aaatctgatt
     2941 catacgtttt cgcaacatat cgatgacatt tgattttgtg agtgactgtg gttctccgag
     3001 ttcattcaca taatatgcag cgacacgatc atctagcata tcctcaattt tatcaatatc
     3061 attgtttttc catgaactta ctaatgatat atatggcatt ttaagagccc tctttcatta
     3121 ttctttatat tgataatgta acatattggc tttaaaattt gaattgattt ctgattaata
     3181 aagtcg
//
LOCUS       DANHPA010000171         3158 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.175, whole genome shotgun sequence.
ACCESSION   DANHPA010000171 DANHPA010000000
VERSION     DANHPA010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3158)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3158)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3158
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.175"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            26..1132
                     /locus_tag="PTC28_002356"
     CDS             26..1132
                     /locus_tag="PTC28_002356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016424838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDK5717590.1"
                     /translation="MIGYGVVGVGYFGAELARAMKKNKGAKIISVYDPENGEQISSEL
                     ECKCANSLEELVSDSEIDCVIVATPNNLHKEPVLEAAKNKKHVFCEKPIALNYKDCVE
                     MVSACKEAGVIFMAGHIMNFFNGVHHAKELIQQGVIGDVLFVKSARNGWEEAQPSISW
                     KKMRDQSGGHLYHHIHELDCVQFIMGGMPEKVTMTASDIAHNGEAFGDEDDFIMMNLE
                     FSGNRYAHLEWGSAFRWGEHYVMIQGTKGAIMLNMYDTGGTLRVDGKETHFLIHETQE
                     EDENRTQIYHGTEMDGAIQYGHPGKRTPLWLNTLIHKEMEFFNDVIHGKEVSSEYLKL
                     LDGTAAEEAIATADAATLSNLEDRKVSLSEILNR"
     gene            1173..2621
                     /locus_tag="PTC28_002357"
     CDS             1173..2621
                     /locus_tag="PTC28_002357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5717591.1"
                     /translation="MKQKEGAVSSSQNMTAIKVDAKPFGMKDKIGYMLGDIGNDAILG
                     LVNSFLMIYYTNVLGIAGSVVGILFLISRIIDAFADVSVGRMVDVAELTPDGRFKPWI
                     RRMKYPFCIISLLLFLPLVHDWNDGAKIAYIFATYLIFGVVLSAINIPYGSMAAAISD
                     HPDDRAALSTFRSVGAAIGMSSTGFLIPMFIYTTNAHGEKTISGMRFFIIAIICCSIA
                     FIVYNIINHMLVERVQVKKKEKVTVGKLLKGLFTDRAILVLIIVDFFVVLTQILYGTT
                     TTYLFNDYFHSPKAMSIAMLFNWGTVVLVAAPTIYLVRKFGKKEVTMIALPFSSLMFF
                     LLFFLHTTNPWVYVTLMFFATIGYSVFNVIVWALITDVIDAHQYNTGLREDGTVYGLN
                     SFARKVAQAFSGGIGGFMLAFIGYQSSTVGGAMQSEVVQERIYMISNLLPAVLFLVAA
                     LILMFGYPMNKKTTDRIARELREERERMQVKI"
     gene            2672..>3158
                     /locus_tag="PTC28_002358"
     CDS             2672..>3158
                     /locus_tag="PTC28_002358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase"
                     /protein_id="HDK5717592.1"
                     /translation="MLAFNQEVRAENNPVKDQSIFKSGDTTQANYFRIPALYTLSNGE
                     MIASADARYGGTHDAKSKINIATSTSFDGKNWTSPTFALQFHDYESQLIDWPRDNVGK
                     NRQIQGSASFIDSAIVQDKNTNKIFLMADMMPAGIGNNNALKSDSGFKEINGKYYMKL
                     KL"
BASE COUNT         1081 a          429 c          664 g          984 t
ORIGIN      
        1 aggagttttt agaatgacaa atgaaatgat aggatatggc gtagttggcg ttggttattt
       61 tggtgcagag cttgctagag caatgaaaaa aaataaagga gcgaagatta tatcagtata
      121 tgatccggaa aatggtgaac aaatatcttc agaacttgaa tgcaaatgtg cgaatagttt
      181 agaggaatta gtatctgaca gtgaaattga ttgtgtcatt gttgcaacac ctaacaacct
      241 tcataaagaa ccagtactag aagcagcaaa aaataaaaaa catgtatttt gtgaaaaacc
      301 tattgcatta aactataaag attgtgttga gatggtcagt gcatgtaaag aggctggagt
      361 tatctttatg gcaggtcaca ttatgaattt ctttaatggt gtgcatcatg caaaagaatt
      421 gattcaacaa ggtgtaatag gggatgtgtt atttgtaaaa tcagctcgaa acggttggga
      481 agaagcacaa ccaagtattt cctggaaaaa aatgagagat caatcaggtg gtcacttata
      541 tcaccatatt catgaattag actgtgttca atttataatg gggggaatgc ctgaaaaagt
      601 tacaatgacc gcatctgata ttgctcataa tggtgaggca tttggtgatg aagatgattt
      661 tataatgatg aacttagagt tctctggaaa cagatatgca catttagaat ggggttctgc
      721 attccgatgg ggagagcact atgtcatgat tcaaggaaca aaaggcgcaa tcatgttaaa
      781 tatgtatgac acaggtggga ctctgagagt tgatggaaaa gaaacacatt tcctaattca
      841 tgaaacccaa gaagaggatg agaaccgtac tcaaatttat catggcacag aaatggatgg
      901 tgccattcaa tatggtcatc caggaaaaag aacaccactt tggttaaata cattaattca
      961 taaagaaatg gaattcttta acgatgttat acacggaaaa gaagtatcaa gtgaatattt
     1021 aaaactttta gatggtacag cagcggaaga agctattgct actgccgatg cagcaacttt
     1081 atcaaattta gaagatagaa aagtttcatt gagtgaaatt ttaaatcgct aacgacaaca
     1141 aggacgaatt catttaaaag gtgatgaaag atatgaaaca aaaagaaggg gcagtttcaa
     1201 gcagtcaaaa catgaccgct atcaaagttg atgcaaagcc atttggaatg aaagataaaa
     1261 ttggatatat gttgggtgac ataggtaatg atgcaatttt aggtctcgta aatagctttt
     1321 taatgattta ttatacgaat gtactgggta ttgcaggcag tgtagtagga atactatttt
     1381 taatttcaag aattattgat gcatttgcag atgtatcagt tggacgtatg gtagatgtag
     1441 cagaattaac gcctgatggt cgatttaaac cgtggattag aagaatgaag tatccgtttt
     1501 gtatcatctc attactacta tttttaccat tagttcatga ttggaatgat ggggcaaaga
     1561 ttgcatatat ttttgcgact tacttgattt ttggcgtagt tttatcagcc attaacatcc
     1621 catatggttc tatggctgcg gcaatcagtg atcatcctga tgatcgagcg gcactgtcaa
     1681 catttagaag tgtgggggca gcaataggga tgtcttcaac gggattttta atcccaatgt
     1741 tcatttatac aacaaatgcg catggtgaaa aaacaatttc tggaatgaga ttctttatta
     1801 tcgcaatcat ttgttgttcg attgctttta ttgtatataa tattatcaat catatgttag
     1861 tagaacgagt gcaagttaag aaaaaagaaa aagtgactgt aggtaaatta ttaaaaggct
     1921 tatttactga tagagcgatt ctagttctaa tcatagtaga tttctttgta gtattaactc
     1981 aaattttata tggtactact acgacatatt tgttcaatga ttacttccat agcccgaaag
     2041 cgatgtcaat tgctatgcta tttaactggg gaacagttgt attagttgca gctcctacaa
     2101 tttacctagt aaggaagttt ggtaaaaaag aagtaactat gattgctcta ccattttcat
     2161 cattgatgtt tttcttgtta tttttcttac acacaacgaa cccttgggtg tatgtcactt
     2221 taatgttttt tgcaacaatt ggttattcag tatttaatgt aatcgtttgg gcattaataa
     2281 ccgatgtaat tgatgcgcat caatataata caggtttacg cgaagatggt acagtttatg
     2341 gtctgaactc atttgcaaga aaagtggctc aggcgttttc tggtggtatt ggtggattta
     2401 tgctagcgtt tattggatat caatcttcta cagttggagg tgctatgcaa tctgaggttg
     2461 tgcaagaaag aatttatatg atatcaaatt tacttcctgc tgtattattc ttagttgctg
     2521 cattgatttt aatgtttggt tatccaatga ataaaaagac gacagataga atcgctagag
     2581 aattaagaga agaacgtgaa agaatgcagg ttaaaatata atgaagaaga ttatcaaatt
     2641 gggagtatta tttacactaa tcagtacgtt gatgttagct tttaatcaag aggttcgagc
     2701 agaaaataac ccggtcaaag atcaaagtat tttcaaatcg ggcgatacaa cccaagcgaa
     2761 ttattttaga atccctgcat tgtatacgtt aagtaatgga gaaatgattg caagcgctga
     2821 tgcacgctat ggtgggacac atgatgcaaa aagtaaaatt aatatagcga catctactag
     2881 ttttgatggt aagaactgga catcccctac atttgcatta caattccatg attatgaaag
     2941 tcaattgata gattggccac gtgataatgt tgggaaaaat agacaaattc aagggagcgc
     3001 ttcatttatt gactcagcaa ttgtacaaga taaaaatacc aataaaattt ttttaatggc
     3061 agatatgatg ccagcgggta ttggtaataa taatgcccta aaaagtgatt caggttttaa
     3121 agaaattaat ggcaaatatt acatgaaatt aaagttga
//
LOCUS       DANHPA010000172         3061 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.176, whole genome shotgun sequence.
ACCESSION   DANHPA010000172 DANHPA010000000
VERSION     DANHPA010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3061)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3061)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3061
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.176"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..250
                     /locus_tag="PTC28_002359"
     CDS             <1..250
                     /locus_tag="PTC28_002359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="head protein"
                     /protein_id="HDK5717593.1"
                     /translation="TLPSLGDLTAHHLRKYAKGIIVGHNGRLIVYSVNKDIDFYLLRH
                     SLDILGVNFKSKYSSSEDRQNKMLSELKQIGLIDYKVL"
     gene            274..459
                     /locus_tag="PTC28_002360"
     CDS             274..459
                     /locus_tag="PTC28_002360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717594.1"
                     /translation="MTKILDYEKLDKMNAEIKEASKKIKAPDVEDMPYELPDTPEDFD
                     DLTDEEIRYLAFGIKPD"
     gene            636..1220
                     /locus_tag="PTC28_002361"
     CDS             636..1220
                     /locus_tag="PTC28_002361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4355 domain-containing protein"
                     /protein_id="HDK5717595.1"
                     /translation="MKEQWLKLSLQFFNDAGTEENTETDNTVENSDSTEETNDTEQLT
                     EAQLKLVNERVNEEMARRTKEMRQQIQDELTEKQKEADKLRKMNAEQKHQYELEKAEK
                     ERDDYKQQLESYKMRQEAMAMFNEAGMQAPESLLNMVVQDTAEATKEAVDSFVSMVNQ
                     EVQRQLESKATQNHVAGNHVEAPKTDEAWKTFLN"
     gene            1235..1456
                     /locus_tag="PTC28_002362"
                     /pseudo
     CDS             1235..1456
                     /locus_tag="PTC28_002362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729310.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2202..2525
                     /locus_tag="PTC28_002363"
     CDS             2202..2525
                     /locus_tag="PTC28_002363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head-tail connector protein"
                     /protein_id="HDK5717596.1"
                     /translation="MKTFLDKVKKRIGIEDHLQDKLLCEIITNVVDELKLRLPKEQAF
                     IPQPLYFIVIEVAVKRYNKVGSEGMVSESVEGHSMSYEEDDFKQYDGFINKFFDDGCG
                     EVLFF"
     gene            2522..2830
                     /locus_tag="PTC28_002364"
     CDS             2522..2830
                     /locus_tag="PTC28_002364"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717597.1"
                     /translation="MRFSDRVMLVTKRRKQYDPDTNQYKRETVTHETLVCNINPLSPT
                     RTSLLFGDVYKAINVIRLNTVVDYEPTHALIDGVCYAIKKRVDSRRQTAFYVEEVVLS
                     "
BASE COUNT         1063 a          451 c          717 g          830 t
ORIGIN      
        1 tactttacca agtttgggag atttaacggc tcatcattta aggaaatatg caaaagggat
       61 aatagtggga cataatggta ggttaatcgt ttacagtgtc aataaagata ttgattttta
      121 tttgttgaga cactcattag atatattagg tgtaaatttt aaaagtaaat acagtagctc
      181 ggaagataga caaaataaaa tgctaagcga acttaaacaa attggattga ttgattataa
      241 agtgctataa taaagatgct aggaggggat acaatgacaa aaatactcga ttatgaaaag
      301 ctagacaaaa tgaatgcaga gataaaagaa gcgagtaaaa aaataaaggc gcccgatgta
      361 gaagacatgc cttatgaatt acctgacacc ccagaagatt ttgatgattt aacagatgaa
      421 gaaattagat atttagcctt tggaattaaa cctgattaag cacctaacca attataaagg
      481 ttgcggtgct ctttttatac gcatttttaa gctactgtgc tgcagtggct ttttttatgc
      541 ccaaaccgtg cttatggcgt taaaagatgc aagtgtagtc caaaccatgc aatgacatta
      601 aacttgcaag agtagattta aatgaggtgc gaaatatgaa agaacaatgg ttaaagttaa
      661 gcttacaatt ttttaatgat gcaggtactg aggaaaatac ggaaacggat aatactgtag
      721 aaaatagtga ttcgactgag gaaacgaatg atacggaaca gttaactgaa gcgcaactta
      781 agttagtgaa tgagcgtgtg aatgaagaaa tggcacgtcg tacgaaagag atgcgtcaac
      841 agattcaaga tgaattgact gagaagcaaa aagaagctga taaattacgt aagatgaatg
      901 ccgaacaaaa gcatcaatac gagcttgaaa aggctgaaaa agaacgtgat gactataagc
      961 aacaactgga gtcatacaag atgcgtcaag aggcaatggc gatgtttaat gaggcaggca
     1021 tgcaagcccc tgaatcttta ttgaatatgg ttgttcagga tacagcagaa gcaacaaaag
     1081 aagctgtaga tagctttgtt tcgatggtca atcaggaagt gcagcgtcaa ttagaaagta
     1141 aagcgacaca aaaccacgtt gcagggaatc atgttgaagc gcctaaaaca gatgaagctt
     1201 ggaaaacatt tttaaattaa gaaaggttga tttgatgatg aaatttaatt tgaaattcaa
     1261 tttacaattt tttgctgatg attcagctag tggtggcggt acgtcctcac ctatagcagc
     1321 tacaaaaacg aaagtggcac tgggtgaaac gaaattaaag gacaaacaca ctggcattgt
     1381 aaaaactgtg acagatgcga agtcgtatgt gacgcctgca ttgattactg atgatgcaat
     1441 ttatatggaa ggtcgttcgt ttacggtcat gaaaggtgat gtcgctgaat tacgtgacta
     1501 cgaccgcaca caagcgaacc atttagatag cccgaaaatt actgaaacaa cttacttttt
     1561 agatcaagag aagtattggg gtcgttttat tgatgcgctt gataaacgtg atactgaggg
     1621 caatattgat gtgaactatg tggtggcacg tcaatccgct gaagtggtcg cgccgtattt
     1681 agataattta cgttttaaaa atattgctga gaatgcaaaa gagcatattg cggttactgc
     1741 taaaaaagaa tacgatgcga ttttggctgt cactgaaaaa atgacggatg atatagcgcc
     1801 aacaaataga acgttatttg tatcgcctgc gttctacact aaagttaagc aacttgtcat
     1861 tcaattgcca caaggggata acaagcaaca ggtgttaggt caaggtgtac aagggaaaat
     1921 tgatgttttt actgttgtcg ttgtaccgac taagttcttg caaggtgttg aggcgattgc
     1981 agttgcaggt caagtgtgtg cgtcaccgct tcaagtgaat cagacaaaaa caaatagcaa
     2041 tattccaggt cgcttcggtg agtctgttga acaattgcta tacacaggtg cgtttgtacc
     2101 ggaagagtta caaaaattca tctacacgtt gggtggcaca gcagtaacac ctaaaaaaga
     2161 tggggttgat gttcatcaat aataaaaagt aggtgattaa agtgaagact tttctggata
     2221 aagtcaaaaa gcgcattggc attgaggatc acttacaaga taagctgttg tgtgaaatta
     2281 tcacaaatgt agtggatgag ttgaagctcc gtttaccaaa agaacaagcg tttattccgc
     2341 aaccccttta ctttattgtg attgaggttg cggtgaagcg ttataacaag gtaggttctg
     2401 aaggtatggt gtcggaaagt gttgaagggc attcaatgtc gtatgaagaa gatgacttca
     2461 agcaatatga tggctttatt aataagtttt ttgatgatgg ctgcggtgag gtgttgttct
     2521 tttgaggttt tcagatcgtg tcatgttggt gacaaaaaga cgcaagcagt acgaccctga
     2581 cactaatcag tataagcgtg aaactgtgac gcatgagaca cttgtttgta atatcaatcc
     2641 attgtcgcca acaaggacat ccctgttatt cggagatgtc tataaggcga taaatgtgat
     2701 tcgtttgaat acggtagtgg attatgaacc gacacatgct ttaatagacg gtgtgtgcta
     2761 tgcgataaaa aagcgtgtag atagtagaag acaaacggcc ttttatgtag aggaggttgt
     2821 gttgtcatga atcacgtgat atggtgaata tataaattag gaaaggggtg aaaaaatgaa
     2881 ccgggtcgaa agagaggaaa ctcgcaaaga aaaaaataag gcgttataag gacattacag
     2941 aaattgtgcg aaatgtaatg gctatcctca taagccttat cacaataatc aaaatgatag
     3001 tcgggggtta atcccctatc gacttcatta tgaaatgagg tgataaatat gacaaataga
     3061 c
//
LOCUS       DANHPA010000173         3022 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.177, whole genome shotgun sequence.
ACCESSION   DANHPA010000173 DANHPA010000000
VERSION     DANHPA010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3022)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3022)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3022
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.177"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            243..1211
                     /gene="pfkA"
                     /locus_tag="PTC28_002365"
     CDS             243..1211
                     /gene="pfkA"
                     /locus_tag="PTC28_002365"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002462395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HDK5717598.1"
                     /translation="MKKIAVLTSGGDSPGMNAAIRAVVRKALYHNIEVYGVYQGYQGL
                     INDDIRKLELGSVGDIIQRGGTFLYSARCPEFKEKEVRQKGIENLRKRGIEGLVVIGG
                     DGSYRGAQRISEECKEIQTIGIPGTIDNDINGTDFTIGFDTALNTIIESVDKIRDTAS
                     SHARTFIIEVMGRDCGDLALWSGLAVGAETIILPETETDIKDIAEKIQHGIDRGKKHS
                     IIIVAEGCMTGDMCASELTKYINVDARVSVLGHIQRGGSPTGADRVLASRLGGYAVEL
                     LLNGETAKGVGIKDNRLVATNFDEIFNTSERQINQRMLGLTEELSI"
     gene            1230..2990
                     /gene="pyk"
                     /locus_tag="PTC28_002366"
     CDS             1230..2990
                     /gene="pyk"
                     /locus_tag="PTC28_002366"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDK5717599.1"
                     /translation="MKKTKIVCTIGPASESEDMLEKLMKAGMNVARLNFSHGSHDEHA
                     ARIRSIRKIAKKLEKNIGILLDTKGPEIRTHDMKDGIITLEKGSHVIVSMQEVEGTAE
                     KFSVTYENLINDVEVGSFILLDDGLIELEVESIDHAAGEVHCKVLNTGELKNKKGVNL
                     PGVRVNLPGITDKDAEDIRFGIEQDVDFIAASFVRRASDVLEIRKILEEVGNRTISII
                     PKIENQEGIDNIEEILEVSDGLMVARGDMGVEIPPEAVPIVQKDLIRKCNKLGKPVIT
                     ATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGAYPEEAVKAMHDIAVA
                     AEQAQNYKQLLSDRTKLVETSLVNAIGVSAAHTALNLSVKAIVAATESGKTARTISKY
                     RPKSDIIAVTPFETTARQCTLVWGVYPVVREGNFTTDELLNNSVATAIESERVENGDL
                     LIIIAGVPTGESGTTNLMKLHLVGEDLASGQGIGRNSAVGRTVVVNNGSELKGRDLDQ
                     AVIVTPSIDESIIPYLDQAVALVTEEAGLTSSSAIIGLEKGIPTVVGVNNVVDTIPDN
                     ALVTVDATQGRVYEGYANVL"
BASE COUNT         1001 a          479 c          674 g          868 t
ORIGIN      
        1 agcaaaaaat cttaaaatgc gcatttttgg gtatattatt gatacaccat agattcaaca
       61 gtgtgttatt taaattgctt ttacaattga atgaaagtgc tatgaaaaca tgaaatatgg
      121 cggattgatg aattcatttg aataaaccgt tttcatttgt ttttgtattt atttatgatg
      181 gaatgcgcaa tgaaattgtg gtatttttaa cataacaact atgcaagaaa gggtatgtct
      241 acatgaaaaa aattgcagtt ttaacaagtg gcggagattc tccggggatg aatgcagcaa
      301 ttcgagcagt tgtaagaaaa gcgctttatc acaatattga agtctatggt gtgtatcaag
      361 gttatcaagg tttaatcaat gacgacattc gcaaactcga gttgggttca gttggcgata
      421 ttattcaacg tgggggtact ttcttatatt cagcacgttg cccagaattt aaagaaaaag
      481 aagtacgcca aaaagggatt gaaaacctta gaaagcgtgg gattgaaggt ttagtcgtta
      541 ttggtggcga tggaagttac cgtggtgcac aacgtattag tgaagagtgt aaagaaattc
      601 aaacgattgg tattccaggt acaattgata acgatattaa tggtactgat tttacaatcg
      661 gttttgatac agcgttaaat acaattattg aatctgtgga caaaatccga gatactgctt
      721 caagccacgc acgcactttt atcattgaag ttatgggccg tgactgtgga gatttagcat
      781 tatggtcagg tttagctgta ggcgctgaaa caatcatttt acccgaaaca gagacagaca
      841 ttaaagatat cgcagaaaaa attcaacatg gtattgatag aggtaaaaag cattctatta
      901 tcattgttgc agaaggttgt atgacgggtg atatgtgcgc atcagaatta acaaaatata
      961 ttaatgttga tgcacgtgta tctgtgctcg gccatattca acgtggcggt agcccaactg
     1021 gtgcagaccg agtacttgca tcacgtttag ggggctatgc tgttgagctt ttacttaacg
     1081 gcgaaacggc gaaaggtgtc ggcattaaag acaaccgatt agttgcgact aattttgatg
     1141 aaatttttaa cacttcagaa cgtcaaatta accaacgtat gttaggttta actgaagaat
     1201 tatctatata attataggag gcatttccaa tgaaaaaaac taaaatcgtt tgtacgattg
     1261 gaccagcatc agaatcagaa gatatgttag aaaagttaat gaaagcaggt atgaatgttg
     1321 cgcgattaaa cttttcacat ggctcacatg atgaacatgc agcacgtatt cgttcaattc
     1381 gtaaaatagc gaaaaagtta gagaaaaata ttggtatctt acttgatact aaaggacctg
     1441 aaatccgtac gcatgacatg aaagatggca tcattacgct tgagaaaggg tcacatgtca
     1501 tcgtgagcat gcaggaagtt gaaggtacag cggaaaagtt ctctgtcaca tacgaaaact
     1561 taattaacga tgttgaagtc ggttcattta ttttattaga tgatggcttg attgaattag
     1621 aggtagaatc tattgatcat gcagcaggtg aagttcactg taaagtttta aatacgggag
     1681 aacttaaaaa taaaaaaggt gttaacttac caggagtacg tgtcaactta ccaggtatta
     1741 cagataaaga tgcggaagat attcgttttg gtatcgaaca agacgttgac tttattgcgg
     1801 caagtttcgt tcgtcgtgca agtgacgttt tagaaatccg taaaatttta gaagaagtgg
     1861 gcaaccgtac aattagcatt atccctaaaa tcgaaaatca agaaggtatc gataatattg
     1921 aagaaattct tgaagtttct gacggcttaa tggtagccag aggggatatg ggtgttgaaa
     1981 ttccaccaga agcagtgccg attgtacaaa aagatttaat ccgtaaatgt aataagctag
     2041 ggaaaccagt tattactgca acacaaatgt tagactcaat gcaacgtaat cctcgtgcga
     2101 cacgtgcaga agcgtctgac gtagcgaacg cgatttacga tggtacagat gcggtaatgc
     2161 tttcaggtga aactgcagca ggggcttatc cagaagaagc tgttaaagca atgcatgata
     2221 tcgcagtagc tgctgaacaa gctcaaaact acaagcaact gttatcagac cgtacgaaac
     2281 ttgttgaaac ttcgctcgta aacgcaattg gtgtatctgc tgcacataca gccttaaact
     2341 taagtgttaa agcgattgtg gctgcaacag aaagtggtaa aactgcgcgt acgatttcga
     2401 agtatagacc aaaatctgac attatcgcag taacaccatt cgaaacaaca gcgcgtcaat
     2461 gtacacttgt atggggtgta tatccagttg ttcgtgaagg taactttact acagatgaat
     2521 tattgaacaa ttctgtagca acagctatcg aaagcgaacg tgttgaaaac ggtgatttac
     2581 tcattatcat agcaggtgta ccaacaggtg aatctggtac gacaaacttg atgaagttac
     2641 atcttgtcgg tgaagactta gcaagtggtc aaggtattgg tcgtaactca gcagtaggtc
     2701 gtacagtcgt tgtcaacaat ggttcggaat taaaaggtcg cgacttagac caagctgtta
     2761 tcgtgacacc atcaattgac gaaagcatta tcccatattt agatcaggct gtagctttag
     2821 ttactgaaga agctggctta acttcttcaa gtgctatcat tggacttgaa aaaggtattc
     2881 caacagttgt aggtgtcaac aatgtcgttg atacaattcc tgataacgca ttagttacag
     2941 tagatgcgac gcaaggtaga gtttatgaag gttatgcaaa cgtactataa tttttaaata
     3001 gatgatacga tattaatttt aa
//
LOCUS       DANHPA010000174         3001 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.178, whole genome shotgun sequence.
ACCESSION   DANHPA010000174 DANHPA010000000
VERSION     DANHPA010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3001)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3001)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3001
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.178"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(456..2192)
                     /locus_tag="PTC28_002367"
     CDS             complement(456..2192)
                     /locus_tag="PTC28_002367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5717600.1"
                     /translation="MIRRYLEFVKPYRWLIVGTIIVGILKFGIPLLIPLLIKYVIDDV
                     INNAALTVDDKLMRLGVSMLIAAFIFVVVRPPIEFFRQYLAQWTSNKILYDIRKKLYD
                     HLQALSSKFYANNKAGEVISRVINDVEQTKDFIMTGLMNIWLDCITIIIALSVMFFLD
                     VQLTLAAIVVLPFYILTVYFFFGRLRALTRERSQKLAETQGFLHERVNGMAVIKSFAI
                     EENEAKNFDQRNTNFLNKAFKHTRWNAYSFSAINTVTDIGPLIVIGYGAYLAITGSVT
                     VGTLAAFVSYLEQLYGPLRRLVSSFTTLTQSFASMDRVFQLFDEPYDIKNAPQAKAIP
                     IREGQIEIENVSFKYNPEERNVLNHLNLDIQHGETVAFVGMSGGGKSTLIHLIPRFYD
                     VTEGHIKIDGHDVKDFDTASLRRQIGMVQQDNILFSDTVKENILLGRPDASFEEVVEA
                     AKLANAHDFIMALPQGYDTEVGERGVKLSGGQKQRLSIARIFLNDPPILILDEATSAL
                     DLESEAIIQEALEKLSHDRTTIIVAHRLSTITHADKIVVIENGEIVEQGSHETLMQRE
                     GAYRRLFSIQNL"
BASE COUNT          949 a          620 c          503 g          929 t
ORIGIN      
        1 ttaaattgga aataacttga ttaatcacct ctaggcacat gcatcattga cacattccat
       61 ttatagattt ttccactaac aatgaattca aaaatgattt attcttatca cattttgcaa
      121 tcagaacatc ctatttattt ttaaatttaa attttcacct tgcttttagg cgtcacgtta
      181 tacctcacaa acatcaaaag gagctaggac attaaatttc cttagctcct ttactatatg
      241 ttgtgtatgc caagggatgg gacataaaaa tttaagcctc aaacccttca tagatcgatg
      301 attcattaat aactttaaaa aagtcagata atgagggtga aaaggataaa aaattgatgt
      361 tattgttttg gggttcatca tcttgcatca atagcatcaa aatttttctg tgttccaatc
      421 cctttcatat cactatcata cgattgcaat tgcaattata agttttgaat tgagaataat
      481 cgacggtatg cgccttctcg ttgcattaac gtctcatggg aaccttgctc cacaatttca
      541 ccattttcaa tgacgacaat tttatctgca tgtgtaatcg ttgaaagtcg atgtgctaca
      601 ataatagtag tccggtcatg actcagcttt tctaacgcct cttgaataat cgcttcactt
      661 tctaaatcta acgcacttgt tgcttcatct aaaatcaata taggtggatc atttaagaaa
      721 atacgagcaa tcgataagcg ttgtttttgc ccaccagaaa gttttacgcc acgttcgccc
      781 acttccgtat cataaccttg aggcaatgcc ataataaagt cgtgggcatt tgcgagtttc
      841 gccgcttcta caacttcctc aaatgacgca tctggacgac cgagcaaaat attttctttc
      901 accgtatcag aaaataaaat gttgtcttgc tgcaccatac cgatttgacg tctcaaactt
      961 gccgtatcga aatctttaac gtcatggcca tcaattttaa tatggccttc cgtcacatcg
     1021 taaaagcgag gaataagatg aattaaggtt gactttccgc ctccactcat accgacaaat
     1081 gcgactgttt cgccatgttg gatatccaaa ttcaaatggt tcaatacatt tcgctcttct
     1141 ggattgtact taaatgagac attttcgatt tcaatttgcc cttcacgaat cggtatcgct
     1201 ttcgcttgtg gtgcattttt aatatcataa ggctcgtcaa acaattgaaa aacacgatcc
     1261 attgatgcaa aactttgcgt taatgttgta aaagaagaca caagtcgacg caatggcccg
     1321 tatagttgtt caaggtagct gacaaatgcc gcaagtgtcc ccactgtcac agatcccgta
     1381 atggctaaat aagcaccgta acctataaca attaatggac caatatcagt cacagtgttg
     1441 atagccgaaa atgaataagc attccaacgt gtatgtttaa aggccttgtt taaaaagttc
     1501 gtgttgcgtt gatcgaaatt tttagcttca ttttcttcaa tcgcaaaact tttaatgacc
     1561 gccatcccat tgacacgttc atgaagaaaa ccttgtgttt cagcaagttt ttgtgaacgt
     1621 tcacgagtca gagcccttaa acggccgaaa aagaaatata ccgttaaaat gtaaaaaggt
     1681 aagacaacga ttgccgctaa cgtcagttgt acgtctaaga aaaacatcac cgacaacgca
     1741 ataataatcg taatacagtc aagccaaata ttcatgagcc ccgtcatgat gaaatctttc
     1801 gtctgttcga catcattaat aacacgtgaa atgacttcac ctgctttgtt gttcgcataa
     1861 aactttgaac ttaacgcttg taaatgatca tacaattttt ttcgaatatc atataaaatt
     1921 ttgttacttg tccattgtgc taaatattgt ctaaaaaact caatcggcgg acgtactact
     1981 acaaaaataa acgccgcgat aagcatagac acacctaaac gcattaactt atcatctact
     2041 gttagagccg cattatttat gacatcatca atgacatatt tgattaataa tggaatcagt
     2101 aatggaatac caaacttcaa tattccgact ataatcgtac caacaatcag ccatcgatac
     2161 ggctttacaa actctaaata tcttcttatc aaaaaaacgc ccccccggta ttatcctacg
     2221 tcaacattga ccccatttgt atcatgtgtt aaataaattt cgcgcgtctc tttgaatgac
     2281 gaattgaacg ggactgggac atgatgtttt cccagtctct gcttctattt atggattgat
     2341 atccattaat ggtgattaaa ccgttgaaaa ataagggtgt atgtaaaaaa tgatgcgatc
     2401 gttttcttga tttcatcaac ttgcaagcag ttgcgcagta ttgaaatatg attgcccaga
     2461 aggctgagac tcctgaggga taagttaaac gctaaacaac gtcatttaac tttaaaagtg
     2521 gctaccgttt aacgcagtag ctgtctgact tctcaatgcg catgattttg agaagtctag
     2581 tcagccttgc gggggcagta cgacgaaatc tttgttacac atgagattcc tgtactgctc
     2641 ccaaaatcca attcggcttc aaacaaatgt tgacttcaat caagccgaat tgagttggag
     2701 ggccagcccc taggaaaggg aagccatgat ggcaatcaaa aaccgaaaat cgtagggagg
     2761 gcaagtttaa caaaatattg catcaatcgc atcaaaaatt tttatgtccc gcccccgtat
     2821 tacattgtca tcgccaatcg gtgttgttat tcaattacaa acgatatgat attttaaaag
     2881 tttttcacct tttgaaatcg ttgacgccac actttaataa aatcaggtgc aaatggtccc
     2941 tttttctgct caatccattg ttgtaaaata tcaacattgc gtcttaaaat catatcaata
     3001 t
//
LOCUS       DANHPA010000175         2972 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.179, whole genome shotgun sequence.
ACCESSION   DANHPA010000175 DANHPA010000000
VERSION     DANHPA010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 2972)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2972)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2972
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.179"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            157..585
                     /gene="lacA"
                     /locus_tag="PTC28_002368"
     CDS             157..585
                     /gene="lacA"
                     /locus_tag="PTC28_002368"
                     /EC_number="5.3.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-6-phosphate isomerase subunit LacA"
                     /protein_id="HDK5717601.1"
                     /translation="MKVIIGADQYGLSLKEHIKTFLLQHQYEVLDVTSEELEDFVDVT
                     VAVAKEVQQNDENLGVVIDAYGVGSFMVATKIKGMIAAEVSDERSAYMTRSHNNSKMI
                     TMGAALVGQTLAENIVKGFIEGHYDGGRHQIRVDMLNKMG"
     gene            601..1116
                     /gene="lacB"
                     /locus_tag="PTC28_002369"
     CDS             601..1116
                     /gene="lacB"
                     /locus_tag="PTC28_002369"
                     /EC_number="5.3.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-6-phosphate isomerase subunit LacB"
                     /protein_id="HDK5717602.1"
                     /translation="MKIAIGSDHIVTDTKMEVSQFLKSLGHEVLDCGTYDFARTHYPI
                     FGKKVGEAVTSGEADLGICICGTGVGINNAVNKVPGVRSALVRDMSSAIYAKEELNAN
                     VIGFGGKIIGELLLCDIVEAFINAEYHPTAENKRLIEKIAQVESENENQKEDSFFDEF
                     LEKWDNGEYHD"
     gene            1187..2155
                     /gene="lacD"
                     /locus_tag="PTC28_002370"
     CDS             1187..2155
                     /gene="lacD"
                     /locus_tag="PTC28_002370"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase"
                     /protein_id="HDK5717603.1"
                     /translation="MSNKQELLARLSDENGIISALAFDQRGALKRMMAQFQASEPEVR
                     DIEQLKKLVSEELTPYASSILLDPEYGLPATQVRHSSTGLLLAYEKTGYDVNAKGRLP
                     DCLVDWSAKRIKEAGAQAVKFLLYYDVDDEAYINDQKEAYIERIGSECKAEEIPFFLE
                     ILAYDDSIKDNKSKEYAKVKPRKVIEAMRVFSNERFGVDVLKVEVPVDMNYVEGFSQG
                     EFVYTREEAAAYFKQQDEATHLPYIYLSAGVSAQLFQETLKFAHEAGAQFNGVLCGRA
                     TWSGAVKAYIENGEEAAREWLRTEGYHNINELNHVLKETAISYKSK"
     gene            2181..2495
                     /locus_tag="PTC28_002371"
     CDS             2181..2495
                     /locus_tag="PTC28_002371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017174827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HDK5717604.1"
                     /translation="MNREEVAMLGFEIVAYAGDARSKYLEALSAAQVGDYDKAEQLIE
                     EGNQCIVDAHKAQTSLLQKEAMGDDIAYSVTMMHGQDHLMTTILLKDMLKHIIELYKR
                     GS"
     gene            2501..>2972
                     /locus_tag="PTC28_002372"
     CDS             2501..>2972
                     /locus_tag="PTC28_002372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDK5717605.1"
                     /translation="MNKLIGFIEKGKPFFEKLSRNIYLRAIRDGFISAMPIILFSSIF
                     LLIAYVPNIFDFKWSKETEALIMKPYHYSMGIVGLFVAGTTAKALTDSYNRKLERTNQ
                     INFISTMLASMSGFLFLASNTLEAGGFANAFMGTKGLLTAFLSAFITVMIYNICI"
BASE COUNT         1035 a          405 c          658 g          874 t
ORIGIN      
        1 ttttttgttt ataaatgatt aaaaatgttt atatttgatt gaaagtaaac aaataatgtt
       61 gaatttttgt ttagatagtt gtatgattta actgtaaaac aatgaaagcg tttgaaaatt
      121 gatggattta gcttttattt cgaaaggatg attattgtga aagtgattat tggtgcagat
      181 caatatggtt taagtttaaa agaacatata aaaacttttt tacttcaaca ccaatatgag
      241 gttttagatg tcacaagcga agaattagaa gatttcgtag atgttaccgt tgctgttgct
      301 aaagaagtac aacaaaatga tgaaaattta ggtgttgtta ttgatgcata tggcgttgga
      361 agcttcatgg tcgcaacaaa aattaaagga atgatagcag cagaggtgtc agacgaacgt
      421 tcggcctata tgacgagaag ccataataac tcgaaaatga ttacaatggg tgcagcattg
      481 gtagggcaaa ctttagctga aaacattgtg aaaggcttta tcgaaggtca ctatgatggt
      541 ggacgtcacc aaattcgtgt agacatgtta aataaaatgg gataagagga ggagcatgag
      601 atgaagattg caattggttc ggatcatatt gtaacagata cgaaaatgga agtatcacaa
      661 tttttaaaat cattgggtca cgaggtgctt gattgtggta cgtatgattt tgcacgaaca
      721 cattatccaa tttttggaaa aaaagtggga gaagctgtca caagtggaga agcagattta
      781 gggatatgta tttgtggtac aggagtggga atcaataacg ctgtcaataa agtgccaggt
      841 gtgcgttctg cattggttcg tgatatgtca tcagctatct atgctaagga agaactaaat
      901 gcaaatgtca taggctttgg tggcaaaatt attggcgagt tattactttg tgatatagtc
      961 gaagccttta ttaatgctga atatcaccct accgcagaaa ataaaaggtt gatagaaaaa
     1021 atagcgcaag ttgagtcgga aaatgaaaat caaaaagaag attccttttt tgatgagttt
     1081 ttagaaaagt gggacaacgg agaatatcac gattaactta tctaaatcat taaagtatat
     1141 ttgcagattt gagtgtattg attttattaa atgtagaggt gtaaaaatga gtaacaaaca
     1201 agaattatta gcacgcttaa gtgacgagaa tggaatcatt tcagcattgg cttttgacca
     1261 acgtggcgca ttaaaacgta tgatggcaca atttcaagca tctgaacccg aagttagaga
     1321 tatagaacaa ttaaaaaaat tagtttcaga ggagctcaca ccttatgcgt cttctatttt
     1381 attagatccg gaatatggtt tgcctgcaac acaagtaaga catagctcga caggtttatt
     1441 attagcatat gaaaaaacgg gatatgacgt gaatgctaaa ggacgtttac ctgactgctt
     1501 agttgattgg tcggccaaac gtattaagga agcaggcgca caagctgtca aattcttgct
     1561 ctattatgat gtcgatgatg aagcatatat caatgatcaa aaagaggcgt atatcgagag
     1621 aattggttca gaatgtaagg cagaagagat accgttcttt ttagaaattc tagcatatga
     1681 tgattcaata aaagataaca aaagtaagga atacgcaaag gtaaaaccaa gaaaagttat
     1741 tgaagcgatg cgcgtatttt caaatgaacg ttttggagtg gatgttttaa aagtggaagt
     1801 acctgtagat atgaactatg tcgaagggtt cagtcaaggt gaatttgtgt acacgcgtga
     1861 agaagcagct gcgtatttca agcaacaaga tgaagcaaca cacttaccgt atatttattt
     1921 gagtgccggt gtttctgccc aattattcca agagacatta aaatttgcac acgaggctgg
     1981 agcgcagttt aatggtgtgt tatgtggacg tgcaacatgg tctggtgcag tgaaagcata
     2041 tatagaaaac ggtgaggagg cagcaagaga atggctgcgc actgaaggtt atcacaatat
     2101 aaatgaacta aatcatgtgc taaaagaaac agctatttca tacaaaagca aataattaac
     2161 aaacggtgga ggtaataagg atgaacagag aagaagttgc aatgttagga tttgaaattg
     2221 tggcatacgc tggagatgca cgctcaaaat atttagaagc attatcagca gcacaagttg
     2281 gcgattatga taaagctgaa caactgattg aagaaggtaa tcaatgtatt gtggatgcgc
     2341 acaaagcaca aacgagttta ttacaaaaag aagcgatggg tgatgatatt gcttacagcg
     2401 taaccatgat gcatggacaa gatcacttaa tgacaaccat tttattaaaa gacatgttaa
     2461 aacatatcat cgaattgtac aaacgaggga gctgacatct atgaacaaac tgattgggtt
     2521 tattgaaaaa gggaaaccgt tttttgaaaa actttctcgt aatatttatt taagagcgat
     2581 tcgtgacggt tttatctcag ctatgccaat tattttattt tcaagtattt tcttattgat
     2641 tgcttatgta ccgaatatat ttgatttcaa gtggagtaaa gagaccgaag cactcattat
     2701 gaagccatac cattattcaa tgggaattgt agggttattt gttgcgggaa caacagccaa
     2761 agcgctaacg gattcataca atcgtaaatt agaaagaaca aatcaaatca actttatctc
     2821 gacgatgctg gcttcgatga gtggtttctt atttctagct tcgaatacac ttgaagcagg
     2881 aggatttgca aatgctttca tgggaacgaa aggcttacta acagcatttt tatctgcctt
     2941 tattactgtg atgatttata acatttgtat ta
//
LOCUS       DANHPA010000176         2923 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.180, whole genome shotgun sequence.
ACCESSION   DANHPA010000176 DANHPA010000000
VERSION     DANHPA010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 2923)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2923)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2923
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.180"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            110..1117
                     /locus_tag="PTC28_002373"
     CDS             110..1117
                     /locus_tag="PTC28_002373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002484800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HDK5717606.1"
                     /translation="MRKKFIAAVIGTTAAATALSAHADASTTYRVQPGDSLWAIATKY
                     NITIAQLKQYNGLNSNLIFPNQVLKVSGGSSTSRTTTHHSSHSTTSSTVYTVRYGDTL
                     SGIAARYGTTYQNIMKWNGLNNFLILPGQKLNVSGPSTTPSRSTAKKPAPKTSSRNAS
                     YYTVQPGDSLSLIASKYGTTYQHIMELNGLTSFLIFPGQQLKVSGSAPSRQTTPTPSP
                     SYQSPTFNHQNLYDWGQCTWYVFNKRKEMGRPISTYWWNANAWDDNAARDGYTINNQP
                     AVGSILQSDLGYYGHVSYVERINADGSILVSEMNFTAAPGILTYRTVPAHRVSAFKYI
                     H"
     gene            complement(1503..1778)
                     /locus_tag="PTC28_002374"
     CDS             complement(1503..1778)
                     /locus_tag="PTC28_002374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717607.1"
                     /translation="MAKKSKKSLSVLSTALTGATLVVDFYNSYIYRSKNRKLSYISVG
                     LGLVDVVLSFYLSLGAKSKFTKAWSFFSASRQVWSGIQKIQAIRTRG"
     gene            2083..2598
                     /locus_tag="PTC28_002375"
     CDS             2083..2598
                     /locus_tag="PTC28_002375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717608.1"
                     /translation="MNQVTKIAIATTLSLGTLLGATAGASAIHADAHAATEQQTPYYT
                     YNGLFNFKGNKALEDKNFYRALQHDNFKYEGLKVGQSTFADVKKAVGNDVKKYYEEKG
                     VTYYEKNDVIFGIDSEGKLVNMTLLIEKINHSDKSVRDHVKQGEIYDAKTTHVAFYSG
                     NSIVIKAKESR"
BASE COUNT         1013 a          516 c          539 g          855 t
ORIGIN      
        1 gtttttgtaa tcataatgtt atataacaga catatttcta catgataatc ggtgtataat
       61 ataaaactgt ataagaataa tatcttctat tttataagga gggaaacgaa tgcgtaaaaa
      121 gtttatcgca gccgtaatag gaacaacagc agctgccaca gcattatcag cacatgcaga
      181 cgcttcaaca acgtatcgtg tacaaccagg tgattcactt tgggctattg caacaaagta
      241 taacatcaca atagcacaac ttaaacaata taatggatta aactctaact taatctttcc
      301 gaatcaagtg ttgaaggttt ctggtggtag cagtacatca cgcacaacaa ctcaccattc
      361 aagtcatagc actacgtcat caacagtcta tacggtacgt tacggagata ctttatcagg
      421 cattgcagcg cgatatggca caacgtacca aaacattatg aaatggaacg gtttgaacaa
      481 cttcttgatt ttaccaggtc aaaagttaaa tgtaagtggt ccgtctacaa caccaagtcg
      541 ttccacagcg aagaagccgg cacctaaaac gtcttcaaga aatgcgagtt attatacagt
      601 acaaccaggt gattcactgt cgttgattgc gtctaaatat ggtacaacat atcaacatat
      661 tatggagtta aatggattaa catccttctt aattttccca ggtcaacaat taaaagtgag
      721 tggatcggca ccgtcacgtc aaacaacacc gacaccaagt ccaagttatc aatctcctac
      781 attcaaccat caaaacttat acgattgggg tcaatgcaca tggtacgtat ttaataagcg
      841 taaagagatg gggcgcccaa tcagtacata ctggtggaat gcaaatgctt gggatgataa
      901 cgctgcacgt gatggttata caattaataa ccaacccgca gtgggatcaa tcttacaatc
      961 tgacttaggt tactatggtc atgtttcgta tgtagagcga attaatgctg atggtagtat
     1021 actcgtatca gaaatgaatt tcactgcagc accaggcatt ctcacttacc gtactgtacc
     1081 agcgcatcgt gtaagtgcct tcaaatatat ccattaatca aaaaacgtga gtataccttt
     1141 tacatggtgc tcacgttttt attttttaag acaagggtcg aatgagaaaa ttttcgtcat
     1201 ttgaaaaaat cccaaaaagt ttgaaatgca tgtcatattc tattaacaaa atggtaacaa
     1261 acatcttgtc gatgattctt aggtaaggat aaagccgttg agtcaatcca tttgtatcgt
     1321 catattcaca gaaacggatg ctttaatgat tagctttaaa aacttggatg aagcgaagat
     1381 ataacgactt gagcatctgg gcaatggtta ctagttacta cataaaaagg cgtgaacaga
     1441 aatcataatg tttcatgttc acgcctatat ttaatgattt gaaaatgaat caagtcgtta
     1501 ccctacccac gtgtgcgaat cgcttggatt ttttggatac cactccatac ttggcgactt
     1561 gctgagaaga aagaccatgc ttttgtgaat ttgctttttg caccaagtga taaatagaag
     1621 cttaatacga catctactaa gccaagccca actgaaatat agcttagctt gcgatttttt
     1681 gagcgataaa tgtaagaatt gtaaaagtct acaactaatg ttgcgcctgt taaagcagtt
     1741 gaaagcacac ttaatgattt tttagatttt ttagccatta tacttccccc aatgaatata
     1801 gtatgatgtc attcattata acattactga taggtcaaaa cccaacatat gcactttcct
     1861 taaatgattg ttaacacgtc ttttagatac agcgttgtag aaaaatttca gtccaatgac
     1921 cgaaaaactt ttggatgaaa atgttatctt aatttgttat cattcgagta aggaacaatt
     1981 tgatatataa gttattataa attggaaatt taattcgaca attacaaata acataaattc
     2041 ctaattttta gaacagtatc gagagaaaga ggagtggtac acatgaatca agttacaaaa
     2101 attgcaatcg caacaacttt atcattaggc acattattag gggcaacagc tggggcaagt
     2161 gcaatccatg cagatgcaca tgccgcaacg gaacagcaaa caccttatta cacatataac
     2221 ggcttattta acttcaaagg gaataaagct ttagaggaca aaaactttta ccgcgcatta
     2281 caacacgata actttaaata tgaaggttta aaagtcggcc agtctacatt cgctgatgtt
     2341 aaaaaagcgg tagggaacga cgtgaaaaaa tattatgaag aaaaaggtgt cacttactac
     2401 gagaaaaatg atgtcatttt cggtattgat agcgaaggta aattggtcaa catgacatta
     2461 ttaattgaaa aaattaatca cagtgataaa tctgtgcgtg atcatgtgaa acaaggcgaa
     2521 atttatgatg ccaaaacaac acatgtcgca ttttactcag gtaactcaat tgtgattaaa
     2581 gcaaaagaga gccgttaaga ttgaggcgta ctttgcccat acaacgtcat agttaaaaaa
     2641 actccgagac ttttcgtgaa tagtagacga taagtctcgg agtttttgag ttgatgagag
     2701 cttgtttaag tatttcaatt taatgcaatc gtgtggcttt gttcagcttc tgcaatagac
     2761 ttggcgagac gctgtgtatt tgcaggcgat tgtaagaaat acagtgtttc tatattaata
     2821 atcaaaacaa ttgtgcaaca acccccctat aaagggagtt tttacaagga ttatcttatt
     2881 aaagtttaat gaaaatcgct atttataaat gatgagtaag gat
//
LOCUS       DANHPA010000177         2719 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.181, whole genome shotgun sequence.
ACCESSION   DANHPA010000177 DANHPA010000000
VERSION     DANHPA010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 2719)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2719)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2719
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.181"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(170..1126)
                     /locus_tag="PTC28_002376"
                     /pseudo
     CDS             complement(170..1126)
                     /locus_tag="PTC28_002376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613563.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
     gene            complement(1110..2435)
                     /locus_tag="PTC28_002377"
     CDS             complement(1110..2435)
                     /locus_tag="PTC28_002377"
                     /inference="COORDINATES: protein motif:HMM:NF016988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDK5717609.1"
                     /translation="MLTFFNLHRDQQRPRLQELLDYYLTNNRGINKREGRDEPYADYR
                     IAHAFVKNGTDFIRGYIGGNEITFRDEKYNEEIQNINDLNDAHVTNVEILEDCIIYGR
                     AYEIVYRNVDNQDIFKRLDPKNVFVIYSNDIEVEPVAAVRYRSEKINGKDVTLIDFYT
                     ADYRAYFYVDDNRLRERADMPQEVNMHQMLQIHEYNANRFRQGVFENVLDLIDAYDYA
                     ESDTANYMTDLNDAMLKIEGHLDLKLEEVKKMRKSRIILAKTKADASGRMGNANVDFI
                     YKQYDVAGVEAYKKRIQKDIHKFTNTPDLSDENFGGVQSGEAMKYKLFGLEQLRSTIE
                     RQLTKGFKRRFAIIQSVRNQLNDPIDLTRMRIEYKPNIPQSLSEYADIFIKLGGRVSQ
                     ETLLSWLPNIENPKEELEKVKAEEQDNQDYHDAIPVQQEKADMNDVELE"
BASE COUNT          729 a          652 c          417 g          921 t
ORIGIN      
        1 tattacgatt taattcttta ttatctgata tcttatcaaa ttttcttcta tattcacttg
       61 aatgaatgta tttcatatca actctatagt catcattctt ctttctttta ttgagtccta
      121 caggttcttg ctcattataa tttgtgttat tcgtatcaat cgcctgaccg tcgttatccc
      181 ttaatcgata tttcccttgt ctatctttga agaacttgtc acgccagtta cctacatgtg
      241 gcactgtcgt acttcgacaa tggggatgca tcggcggggc attaacacct ggcaccatgt
      301 ctttgacttt aaacactttc ttatcataat gacgacagat tttagatgtc ttttcatcac
      361 gtttcgccac gaactcatat tcggcatcgt cacccattgt ctctaaataa tgcaatttct
      421 gcgcttctgt ttgaacgcgt gcagcttcgg taatcaataa ccttttcgta ttagcgactg
      481 tctgcttctg tttcttgcgt atctctggca caaactcata cggatgacgc ccacgtaaca
      541 tcacatgact ggccatccgc tcaacatctt ttctcagttc atcttgattg ttccaaagtc
      601 gctcagacca attcagcttg ccaaagttag agtacacaat cgcttcaaca tctgtcggct
      661 tcacatgcac atccgcacct aaaatacctg cttgatgttt cagtgtacgt gtcacgctat
      721 cttgtaagtg atgattcacc actttctctt gttccgcata ggctttcgtc acaatcaaac
      781 cgagctcatg ctttaacaac tgctcacggt tcacatacat cgttgtgtta taacgtttca
      841 acgctttatt tgctttttcg ctaaagtctt tattttcaac ataggccttc gcttgcattt
      901 gaaacgcttc aacatcaaac gcattcgcaa tctttttcgc ttctcgccag tcaatccctt
      961 cagctgtcgc aagcttgcca taatacgcta ataagttttt gtagatatcc gcaatcatca
     1021 tcgcaacaat acgctcaatt tcagcaatct ttgcagcatc ttccaaagtc tcagattgta
     1081 tcgcttgttg tgcccgctct aaccagtaat cactcaagtt cgacatcgtt catatccgct
     1141 ttctcttgtt gtacaggtat cgcatcatgg tagtcttgat tatcttgttc ctccgctttc
     1201 actttttcaa gttcttcttt cgggttctca atattcggta accacgataa caacgtctct
     1261 tgactcacac gaccaccaag tttaataaag atgtccgcgt attctgatag cgattgcggg
     1321 atgttcggct tatattcgat acgcatacgc gtcaaatcaa tcgggtcgtt cagttgattt
     1381 ctcacactct gaataatcgc aaatcgacgt ttaaaacctt tcgtcaactg cctttcaatt
     1441 gttgagcgta actgttcaag cccgaataac ttatatttca tcgcctcacc tgactgcaca
     1501 ccgccaaagt tctcatctga taaatcagga gtgttcgtaa acttgtggat gtctttttga
     1561 atacgcttct tatacgcttc aacacccgca acatcatatt gcttgtaaat aaaatccaca
     1621 ttcgcattac ccatacgccc tgatgcatcc gcttttgtct tagcgaggat gatacgtgac
     1681 ttacgcatct ttttcacttc ttcaagcttc aaatcaagat gtccttcaat tttcaacatc
     1741 gcatcgttta aatcagtcat gtagttcgct gtatcagatt ccgcataatc atacgcatcg
     1801 attaaatcga gtacgttctc aaacacacct tgtctgaacc tgttcgcatt gtactcgtga
     1861 atttgtaaca tctgatgcat attcacttcc tgtggcatgt cagcacgttc tcttaaacgg
     1921 ttatcatcta cataaaaata agcacgataa tcagctgtat agaaatcaat cagcgtcaca
     1981 tctttaccgt ttattttttc agaacgataa cgtactgctg caactggttc gacttcaata
     2041 tcattactgt aaatcacaaa tacattcttt ggatctaaac gtttaaaaat atcttgattg
     2101 tcaacattac gatacacaat ctcataagcg cgcccataaa taatacagtc ttctaaaatc
     2161 tccacattcg tcacatgcgc atcattcaaa tcattaatat tttgaatttc ttcgttatac
     2221 ttttcatcgc ggaaagtgat ttcattcccg ccaatgtagc cccgaataaa atcagtgcca
     2281 tttttaacaa acgcatgcgc aatacgataa tccgcatatg gttcatcacg tccctcacgc
     2341 ttgttaatcc ctctgttatt cgtcaaataa taatcgagca gctcttgtaa tcgaggtcgt
     2401 tgctgatctc gatgcaaatt aaaaaacgtt aacaattttt caccttttta cagtcaaagg
     2461 agtgattttc atgcaacttg aaaaaagaga aaaaatggag gtaccgtata ttttatattg
     2521 acgaaaatgg aataaggaag tcactatcta aaaaccgaca aaaccatttt caccgtcttt
     2581 acggtatatg ctcagccatc ttgttaacgt ttgaatagga atatctagat ctctagaaac
     2641 ttctgaggca cgtctcgctg attttactca ttgaattgct ttcattttaa agctatgatc
     2701 ctattttctt cttgccatc
//
LOCUS       DANHPA010000178         2697 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.182, whole genome shotgun sequence.
ACCESSION   DANHPA010000178 DANHPA010000000
VERSION     DANHPA010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 2697)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2697)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2697
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.182"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..481
                     /locus_tag="PTC28_002378"
     CDS             <1..481
                     /locus_tag="PTC28_002378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717610.1"
                     /translation="QSPLISNIIAFGALICSIWSIVYTYSQNKYQITISEFTAEKFED
                     IPLYFCFDVINTSTKGIRIKKIELIKNGEMLNDLQFEPTKRLVFYYPNPSNSPLYSKP
                     FKTESFLAPQSSKSYKYHLNEIPDSIRICADKPFYRFKKNKLFIINPDDIEQYNESH"
     gene            complement(505..687)
                     /locus_tag="PTC28_002379"
     CDS             complement(505..687)
                     /locus_tag="PTC28_002379"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717611.1"
                     /translation="MIDIRNNLKLLIESEIDDIRIPALVLKTIKFFLEEQISTEDRIK
                     IIRMLDAMYRKGDNAN"
     gene            complement(884..1111)
                     /locus_tag="PTC28_002380"
     CDS             complement(884..1111)
                     /locus_tag="PTC28_002380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="BetR domain protein"
                     /protein_id="HDK5717612.1"
                     /translation="MDANKLKAEIVLKGLKPSELLEKMQEKGIKMSKASYYRRIKDFD
                     KFDRAEILAIAEILELNKEQILDIFFDAKVS"
     gene            1287..1598
                     /locus_tag="PTC28_002381"
     CDS             1287..1598
                     /locus_tag="PTC28_002381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002475322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDK5717613.1"
                     /translation="MKPDIKARRLELNLTLEQVGNMVGVGKSTVRKWETGDIENMKRD
                     KIVKLAEALKVSPSYIMGVEDEKPQQNTLAAHLDGDYTEEELAEILEYAKFVRQKHRN
                     K"
     gene            1612..2073
                     /locus_tag="PTC28_002382"
     CDS             1612..2073
                     /locus_tag="PTC28_002382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin"
                     /protein_id="HDK5717614.1"
                     /translation="MSKYEELMKKHSHIPISDNYKLKGNFKGIFANGAILIDKDLSNF
                     QKHAVLAEEIAHYKYTYGNILDQSNMLNKKLELFARRKAYESVITLQGLIDAYNNGIS
                     NIHEMADFFEVNLDFAQECLKHYQMKYGLYTHYGDYIIRFDPLTINKQLSD"
     gene            2120..>2697
                     /locus_tag="PTC28_002383"
     CDS             2120..>2697
                     /locus_tag="PTC28_002383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717615.1"
                     /translation="MLIRKDENRSGCSGCFGCFGIVLLIILLFSGCSAIFGNSDEDDT
                     EDTSPKTEDNSKKESETSDKEEKTSAKENAENDNTKTDSTDGEINTTPEDDTVYGKLS
                     QPHGNNKIVNVDDTLYILNDNDEILQAEKSFSKLPLDKNLDKNLLNEHIKDYMAKDAE
                     FVSNLTDTKQKYHSKSLNKDYYVQLVLDEHGNV"
BASE COUNT         1006 a          422 c          412 g          857 t
ORIGIN      
        1 tcaatcaccc ctaattagta atatcattgc ttttggtgca ttaatatgct ctatttggtc
       61 aattgtctat acatatagtc aaaacaagta ccaaattact atttctgaat ttactgcaga
      121 aaagttcgaa gacataccat tatacttttg tttcgatgtc atcaatacat ccacaaaagg
      181 aattcgaata aaaaaaatag aacttataaa aaatggtgaa atgcttaatg atttacaatt
      241 tgaacctaca aaaagacttg tgttttatta tcctaatccc agtaattcac cactttattc
      301 aaaaccattt aaaactgagt catttcttgc tcctcaatca tctaaaagtt ataagtatca
      361 cttaaatgaa attcctgact caatacgaat atgtgctgat aaaccatttt atagatttaa
      421 aaaaaataaa ttattcatta taaaccctga tgatatagaa caatataatg agagccatta
      481 aaaaccagat cacgcgaaat atgattagtt agcattatct ccttttctat acatggcatc
      541 gagcattcgt attattttaa tacggtcctc ggtgctaatt tgttcttcta aaaagaactt
      601 aatagttttt aagacaagtg caggaattcg aatatcatcg atttcacttt caattaaaag
      661 ttttaaatta tttcgaatat ctatcatttt caatccctcc tttcacaatt aagataaaat
      721 agctgtactt attcgttaaa ttgcaaatca agcaaaaata tgtcattttg gacgattaaa
      781 caaacattta ttagtcaaat aagcactaaa gtgtgtttta atcttgaaag tcgacaaaaa
      841 taagaatgtt gatactttta ggattgaact cttaaagtat cttttaggac actttggcat
      901 caaaaaaaat atctaggatt tgttctttat taagctctaa tatttctgct attgctaaga
      961 tttccgctct atcaaactta tcaaaatcct taatacgtct gtaatatgaa gcttttgaca
     1021 ttttgatacc tttttcttgc attttttcta aaagttcact aggtttaaga cctttaagaa
     1081 caatttcagc ttttaattta tttgcatcca tatctctcac ctccataagt gtcttaaagg
     1141 atacttaaaa tatacatctc tcttatcctg atgtcaacac taaagtttct aaaaagatac
     1201 ttatgtcaac aaaaacattt taattgttgc tttaaagata cttaagtatt ataattgaaa
     1261 catcaaagaa cgaggaggtt catgcgatga aacccgatat taaagcaaga cgcttagaat
     1321 tgaatttaac attggagcaa gttgggaata tggtcggtgt aggtaaatct actgttcgta
     1381 aatgggaaac tggcgatatt gaaaatatga aacgcgataa aattgttaaa ttagcagaag
     1441 ctcttaaagt ttcaccttct tatattatgg gtgtcgaaga tgaaaaacct caacaaaaca
     1501 ctttggcagc acaccttgac ggtgattata ccgaagagga attagcagaa attttagaat
     1561 acgctaagtt tgtaagacaa aagcatagaa ataaataaaa ggtgatgtta tttgagcaaa
     1621 tatgaagagt taatgaaaaa gcatagccac atccctatca gcgataacta caaacttaaa
     1681 ggcaatttta aaggaatctt tgctaatggc gctattttga ttgataaaga tttatcaaat
     1741 ttccaaaagc acgcagtctt agccgaagaa attgctcact ataagtacac atacggcaac
     1801 atcttagacc aatccaacat gttgaataaa aagcttgaat tatttgcacg acgtaaagcc
     1861 tatgaatcag taatcacgct gcaaggctta atagacgctt ataataacgg catctctaac
     1921 attcacgaga tggccgattt tttcgaggta aatttagatt ttgcgcaaga gtgtttaaaa
     1981 cattatcaaa tgaaatatgg cttatatact cactacggcg attacattat ccgatttgac
     2041 ccattaacaa ttaataaaca attaagtgat taaaccgctt catgcgttta atataaattt
     2101 ttttatggag gaaatgcaga tgttaatacg aaaagacgaa aataggtctg gttgctcggg
     2161 atgttttggt tgttttggta ttgtactgtt aatcatctta ttatttagcg gatgcagtgc
     2221 catttttgga aactcagacg aggatgacac tgaagataca agtccaaaaa ctgaagacaa
     2281 ttcaaaaaaa gaaagtgaaa cgtcagataa agaagaaaaa acttcagcaa aagaaaatgc
     2341 tgaaaatgat aatacaaaaa ctgattcaac tgatggagaa atcaatacga ctcctgaaga
     2401 tgatacagta tacggaaaat tgtcgcagcc acatggtaat aacaaaattg tcaatgttga
     2461 tgatacttta tatattctta atgataatga tgaaatttta caagctgaaa aaagtttctc
     2521 gaaactacca ctcgataaaa atttagacaa aaaccttttg aatgagcata taaaagatta
     2581 tatggcaaaa gacgctgagt ttgtatctaa tttaacagat acaaagcaaa agtatcattc
     2641 aaagtctttg aataaagatt actatgtgca attggttctc gatgagcatg gcaacgt
//
LOCUS       DANHPA010000179         2690 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.183, whole genome shotgun sequence.
ACCESSION   DANHPA010000179 DANHPA010000000
VERSION     DANHPA010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 2690)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2690)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2690
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.183"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..928
                     /locus_tag="PTC28_002384"
     CDS             <1..928
                     /locus_tag="PTC28_002384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086037612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="leukocidin/hemolysin toxin family protein"
                     /protein_id="HDK5717616.1"
                     /translation="KNKLLAATLSISLVLPLITPYSEEAKAANTIEEIGEGAQIIKRT
                     EDVSSRKWGVTQNIQFDFVKDPKYNKDALIIKMQGFIKSRTSFTDVKGKGYESTKRML
                     WPFQYNIALKTNDPNVSLINYLPKNKIESIDVSQTLGYNVGGNFQSAPLLGGKGAFNY
                     SKKISYTQKNYISEVAQQNSKNIRWEVKANSFNTENGQVSAYDRHLFVRSPIGPNARD
                     FFVPNDELPPLIQSGFNPSFIATVSHEKDKGDTSEFEIAYGRNLDITYATFFPRTGIF
                     AERRHNALMNRNLVTKYEVNWKTHEIKVKGHN"
     gene            930..1910
                     /locus_tag="PTC28_002385"
     CDS             930..1910
                     /locus_tag="PTC28_002385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086037611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leukocidin/hemolysin toxin family protein"
                     /protein_id="HDK5717617.1"
                     /translation="MKISKVIKAATATSVALMLFSNPVYAANQITPVSEKKVDDKITL
                     YKTTATADSDKLNISQLLTFNFIKDKSYDKDTLVLKAAGNINSGYKSPNPNDYIYSSF
                     YWGAKYNVSISAESKGAVNVVDYAPKNQNEEFQVQNTLGYSFGGDISISKGLSGGLNG
                     SESFSETINYKQESYRTTIDKHTDNKTIGWGVEAHKIMNAGWGPYGRDSFHDLYGNEL
                     FLGGRQSKLNAGQNFLPTSQMPLLARGNFNPEFLSVLSHKPNGAKTSKIKVTYQREMD
                     EYTNYWNGFHWMGTNYKNQNNATFTSFYEIDWDQHTVKLIKTHSDEKNPS"
     gene            complement(1969..2553)
                     /locus_tag="PTC28_002386"
     CDS             complement(1969..2553)
                     /locus_tag="PTC28_002386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4355 domain-containing protein"
                     /protein_id="HDK5717618.1"
                     /translation="MKEQWLKLKLQFFNDAGTEEAVSDENVETEPTQEVEELSESQMK
                     LVNERVNEEMARRTKEMRQQIQDELTEKQKEADKLRKMNAEQKHQYELEKAEKERDDY
                     KQQLESYKMRQEAMAMFNEAGMQAPESLLNMVVQDTAEATKEAVDSFVSMVNQEVQRQ
                     LESKATQNHVVGNHVTTPNNNKNTPQKVELNSPF"
BASE COUNT          928 a          481 c          441 g          840 t
ORIGIN      
        1 aaaaaataaa ttattagccg caacactatc tataagttta gttcttccac ttattacccc
       61 atacagtgaa gaagccaaag ctgcaaacac tatagaagag atcggcgaag gagcacaaat
      121 tattaaaaga actgaggatg taagcagcag aaaatggggc gttactcaaa acattcagtt
      181 tgactttgtt aaagacccta aatacaacaa agatgcatta attattaaaa tgcaaggttt
      241 tatcaaatct agaacaagtt ttactgatgt taaagggaaa ggatatgaat caacaaaaag
      301 aatgctttgg ccttttcaat ataatattgc tctaaaaaca aatgatccta atgtctcttt
      361 aattaattat ctccctaaaa ataaaattga atcaatagat gtgagccaaa cattaggtta
      421 caatgttggc ggtaacttcc aaagtgcacc attacttggg ggtaaaggcg catttaatta
      481 ttcaaagaaa attagctata ctcaaaagaa ttatattagt gaagtcgcac aacaaaattc
      541 aaaaaatatc agatgggaag tcaaagcaaa ttcatttaat acagaaaatg gacaagtatc
      601 agcatatgac agacacttat ttgtaagaag tcctatcggg ccaaatgcaa gagacttttt
      661 tgtgccaaat gatgagttac ctcctttaat tcaaagtggt tttaatccat cgtttattgc
      721 aactgtatct catgaaaaag ataaaggcga tacaagtgaa ttcgaaattg cttatggtag
      781 aaatctagac attacgtatg caactttctt cccaagaact ggcatatttg ctgaaagacg
      841 tcataatgct ttaatgaatc gaaatcttgt cactaaatat gaagtgaact ggaaaacaca
      901 cgaaattaaa gtaaaggggc ataattaata tgaaaataag caaagttatc aaagctgcta
      961 ctgcaacatc cgtggcattg atgttatttt ctaatcctgt ctatgccgct aatcaaatta
     1021 cacctgtatc tgaaaaaaaa gtagacgata aaatcacttt atataagact accgctactg
     1081 cagattcaga taagttaaat atttctcaac tcttaacttt taattttatt aaggataaga
     1141 gctatgataa ggatacctta gtacttaaag ctgcaggtaa tattaactca ggttataaaa
     1201 gccctaaccc taacgactat atctattcaa gtttttattg gggggctaag tataatgtgt
     1261 caatcagtgc agaatcaaaa ggtgctgtta acgtagttga ttatgcacca aaaaatcaaa
     1321 atgaagagtt tcaagttcaa aacactctag gctactcttt tggaggagat attagtatct
     1381 ccaaaggttt gtcaggcggt ttgaacggct cagaatcatt ttcagaaaca ataaactata
     1441 aacaggaaag ttatagaaca actatcgata aacacacaga taataaaact attggctggg
     1501 gcgttgaagc acataaaatc atgaatgctg gttggggccc atatggtcga gatagcttcc
     1561 atgacctata tggaaatgaa ttgtttttag gtggtagaca aagtaaatta aacgctggac
     1621 aaaacttctt acctacgagt caaatgccac ttttagcaag aggtaacttt aatcctgaat
     1681 ttttaagtgt attatcacat aaaccaaatg gcgctaaaac atcaaaaatt aaagtcacgt
     1741 atcaaagaga aatggatgag tatacaaatt attggaatgg ctttcattgg atgggtacaa
     1801 actataaaaa tcaaaacaat gccacattta catcatttta tgaaattgat tgggatcagc
     1861 atacagtaaa actaatcaaa acacattctg atgaaaaaaa cccatcataa tttaaatttg
     1921 atatatcaat aattcaaata ttttcaaagt gatattttgt aatacgccct aaaaaggaga
     1981 attcaattct actttttggg gtgtattttt attattattc ggtgtcgtca catgattccc
     2041 aacaacatgg ttttgtgtcg ctttactttc taattgacgc tgcacttcct gattcaccat
     2101 cgaaacaaag ctatctacag cttcttttgt tgcttctgct gtatcttgaa cgaccatatt
     2161 caataaagat tcaggggctt gcatacctgc ctcattaaac atcgccatcg cctcttgacg
     2221 catcttgtat gactcaagtt gttgcttata gtcatcacgt tctttttcag ccttttcaag
     2281 ctcgtattga tgcttttgtt cggcgttcat cttacgtaat ttatcagctt ctttttgctt
     2341 ctcagtcaat tcatcttgaa tttgttgacg catctctttc gtacgacgtg ccatttcttc
     2401 attcacacgc tcattcacta acttcatttg agactcagac agttcttcaa cttcttgtgt
     2461 cggttcagtt tcaacattct catcactcac ggcttcctca gtacctgcat cattaaaaaa
     2521 ttgtaatttc aactttaacc attgttcttt catatttcgc acctcatttt catctactct
     2581 tgcaagtttt atgtcattgc atggtgtgga ctacacttgc atcttttaac gccataagca
     2641 cggtttgggc ataaaaaata gccactgcaa tacagtagct taaaattggg
//
LOCUS       DANHPA010000180         2688 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.184, whole genome shotgun sequence.
ACCESSION   DANHPA010000180 DANHPA010000000
VERSION     DANHPA010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 2688)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2688)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2688
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.184"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..732
                     /locus_tag="PTC28_002387"
     CDS             <1..732
                     /locus_tag="PTC28_002387"
                     /inference="COORDINATES: protein motif:HMM:NF012798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDK5717619.1"
                     /translation="CLEFRTHLIDNCNSINTARTIWFTFKAVFSYASLYYGLSPNPCT
                     GIPTIPKKKTKFNFVTKEEFHNKIVNLKNDTYREMLTFMFYTGTRVGEAMGMLWEDVN
                     LERKEISISKTWDITQRKMADYPKTSSSIAILPIPKILVEMLSDMYEIASNKYYGFND
                     SMFVFGGYAPPDYAHFSRTVKTIFPKITSHGLRHSYASYLADKGCDIYVLRDLLRHSS
                     ITETVDTYTHFYNNKKHDVMSLFDD"
     gene            complement(761..1912)
                     /locus_tag="PTC28_002388"
     CDS             complement(761..1912)
                     /locus_tag="PTC28_002388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HDK5717620.1"
                     /translation="MKSVLIQSAIQKEWLAKLEAHREELTKYAQSNDRAHRFPHENIQ
                     WLVDEGYTQLTLPESYGGRGATLEDMVVLQSVLGSIDGPTALSIGWHIALVGEVFERR
                     IWDKAILDDFAEAVKNGALANRAVSEAETGSPTRGGRPQTYARFENSHFILNGVKTFT
                     SMSPVLTHIIVAAYIPEKEQVGFFMVKKDTPGLEIANNWNMVGMRATESHDVILNDVP
                     VQPDQLIEIRGEGPPYQNGWLLHIPATYLGIAQAARDYAVDFALEYSPNSIEGTIADL
                     PVVQQNIGQMETKLITARHLLWSTARAYQKMTPQDVVAAETAASKVVVMNEGLDVIDL
                     AMRIVGAKSLEMERPLQRYFRDMRAGLHNPPMQDMAFTKIASIAIDSRR"
     gene            complement(2350..>2688)
                     /locus_tag="PTC28_002389"
     CDS             complement(2350..>2688)
                     /locus_tag="PTC28_002389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDK5717621.1"
                     /translation="YKIKNMKELMTISFTTKGIYTEIKKKYSLTYEELFILTFILEHQ
                     QETYNVKDIIRSSKFKPYYITKAMQKLKDFGFLTKKRNEQDERTVIIEVSKEQYEKIA
                     SLFNEIETLL"
BASE COUNT          774 a          550 c          455 g          909 t
ORIGIN      
        1 tgtttagagt ttagaactca tcttatagat aattgtaatt caataaatac agctcgtacg
       61 atctggttca cttttaaagc tgttttttca tatgcttctc tttactacgg tttgtcgcca
      121 aatccttgta ctggtatacc tacaatacct aaaaagaaaa ctaaattcaa ctttgtaact
      181 aaagaagaat ttcacaataa aatagttaat ctgaaaaacg acacatatcg agaaatgtta
      241 acttttatgt tttatacagg cactagagtg ggcgaagcaa tggggatgct ttgggaagat
      301 gtgaatctag aaagaaaaga aataagtata tctaaaactt gggatatcac tcaaaggaaa
      361 atggccgatt atcctaaaac tagctcatca atagctatat tgccaatacc aaaaattctc
      421 gttgaaatgt tatctgatat gtatgaaatt gcatcaaata aatattatgg ctttaacgat
      481 tcaatgtttg ttttcggtgg ttacgcccca cctgattacg cacatttttc gagaaccgtt
      541 aaaaccattt ttcctaaaat aacatcacac gggttaagac attcttatgc aagttacctt
      601 gctgataaag ggtgcgatat ttatgtgttg cgagatttgt tgcgccattc aagtataact
      661 gaaacagttg atacttacac tcatttttac aataacaaaa agcatgatgt tatgtcacta
      721 tttgatgact aatggtatcg aaatggtatc atttttataa ttatctcctg gaatctatag
      781 caatactggc gattttagta aacgccatgt cctgcatggg tgggttatgc aagcctgcac
      841 gcatgtctcg aaaatatcgt tgcaatgggc gctccatttc taaacttttt gcaccgacga
      901 tacgcatcgc caaatcaatc acgtccaatc cttcattcat cactacgact ttacttgcag
      961 cggtttctgc agcaacaaca tcttgtggtg tcattttttg gtaagcacgt gcagtactcc
     1021 atagtaaatg cctcgctgta ataagttttg tttccatttg accgatattt tgttgcacaa
     1081 ccggtaagtc tgcaatcgtc ccttcaatgc tattcggact atattctaat gcaaaatcaa
     1141 ctgcataatc tcgagcagct tgggcaatac ctaaataagt tgcgggaatg tgtaataacc
     1201 aaccattttg atacggtggc ccttctcctc tgatttcgat gagctggtct ggttgaactg
     1261 gcacatcatt cagtatcaca tcatgacttt ctgtcgcacg catgccgacc atattccaat
     1321 tattggcaat ttctaaacct ggcgtatctt tcttgaccat aaaaaagcct acttgttctt
     1381 tttcagggat gtaggctgcc acaatgatat gtgttaagac aggactcatc gacgtaaatg
     1441 ttttaacacc atttaaaata aaatggctat tttcaaagcg cgcatacgtt tgggggcgtc
     1501 cacctcttgt aggactgcct gtttccgctt cacttaccgc tctatttgcc agtgcgccgt
     1561 ttttcactgc ttcagcaaaa tcatctaaaa tcgctttatc ccaaatgcga cgttcaaaca
     1621 cttcccctac aagtgcaatg tgccaaccaa ttgaaagtgc agtaggtcca tcaatcgacc
     1681 caagtactga ctggaggacg accatatctt ctaaagtggc tcctcgtccg ccgtacgatt
     1741 caggtaatgt caattgcgta tacccctcat caactaacca ttgaatattc tcgtgaggaa
     1801 aacgatgcgc tcgatcatta ctttgcgcat attttgtcaa ttcttcacga tgcgcttcaa
     1861 gctttgcgag ccattctttc tgtatagcag actggattaa cacagatttc atttctaaaa
     1921 cctctcaatc tttttatttc ttacttactt tgtcaacatt ataatataaa tatgtgcgaa
     1981 tgcctaatcc gagttttaaa atgggtttta aaatacgccg ttgatagcta cagtttccgc
     2041 cttgattgaa ggggattttg tgataacgtt ttgtacgcat cagaccccat ctagtcatgc
     2101 tgtgttgcga taacataaaa aaagcgacaa aaagcttatg gtgtacgctt tttgtcgctt
     2161 attccccatc tctttttcac tatctttagt gcactaaaga ccccatctag atagcggttt
     2221 tctttggata tgtcgctgct agaaacagat gatatgccct tcaatccgaa actacttgcc
     2281 gctaatccaa tattgttcat tgtttattgc ccattcatgc tacatgctgt caatccgtca
     2341 atgatatgct taaagtaacg tttcgatttc gttaaataaa ctcgcaattt tttcgtattg
     2401 ctcttttgaa acttcaataa tgactgttct ttcatcttgt tcattacgct ttttagttaa
     2461 gaaaccaaag tctttaagct tttgcatcgc tttcgtaatg taatatggct taaacttaga
     2521 agatcttata atatctttca cattataagt ttcttgttga tgttccaaaa taaacgttaa
     2581 tatgaatagt tcctcgtaag ttaagctata ctttttctta atttctgtgt aaatcccttt
     2641 tgtcgtgaag ctgattgtca ttaactcttt catatttttg attttata
//
LOCUS       DANHPA010000181         2611 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.186, whole genome shotgun sequence.
ACCESSION   DANHPA010000181 DANHPA010000000
VERSION     DANHPA010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 2611)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2611)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2611
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.186"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            33..383
                     /locus_tag="PTC28_002390"
     CDS             33..383
                     /locus_tag="PTC28_002390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000171449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717622.1"
                     /translation="MTLEKQLKEYITNLFNLPKDEKWECESIEEVADNILPDQYIRLG
                     PLTNKILHTYTYYSDTLHERHIYPFILYYQKQLIAIGYIDETNDMDFLYLHNTVMPLL
                     DQRHLLEKENYNNE"
     gene            468..779
                     /locus_tag="PTC28_002391"
     CDS             468..779
                     /locus_tag="PTC28_002391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000833212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717623.1"
                     /translation="MKRYITRSIANYLPAMLQQQLWKLVAQRENEQFKELEEIDYFHI
                     FQFNMHNSQLYIKHKQERPEYVKIHKANYSKAININKVYIIREDDVDLSYYVMLLPEE
                     Y"
     gene            798..1319
                     /locus_tag="PTC28_002392"
     CDS             798..1319
                     /locus_tag="PTC28_002392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000836008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1643 domain-containing protein"
                     /protein_id="HDK5717624.1"
                     /translation="MKSIKSVLETEAIFSQDKMHRYLLKKTWDIDKEVLTIITMYPHY
                     DGVINVDLTTQLIVNKVAEKDEYGGVNFINLFSNIDTPINLKHIENSHDKHTDIHIMK
                     AVKEADSVLLAWGSYGKKPLVENRVNEVLDMLKPHSKKISILTNPQTNEIMHPLNPYA
                     RKAWTIKPLKETK"
     gene            1321..1527
                     /locus_tag="PTC28_002393"
     CDS             1321..1527
                     /locus_tag="PTC28_002393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001077283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717625.1"
                     /translation="MNQTWKEVYQYLMHQPHIDVIKGIIAFSSNKKNNSELDELYSIY
                     MNDDSITSIVHPDLIESIELIHNE"
     gene            1520..1942
                     /locus_tag="PTC28_002394"
                     /pseudo
     CDS             1520..1942
                     /locus_tag="PTC28_002394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019469189.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="JAB domain-containing protein"
     gene            complement(1933..2577)
                     /locus_tag="PTC28_002395"
     CDS             complement(1933..2577)
                     /locus_tag="PTC28_002395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDK5717626.1"
                     /translation="MDIANMTIMLLIGVLGGFISGLIGIGGAIIIYPAILILPPLIGI
                     PAYSAYIASGLTSSQVFFSTLSGSLNARKQPAFSPKLVIYMGGGMLIGSMLGAILASL
                     FNATFVNTVYVIIAILALILMFIKVKPTTQETKSKPLLFIIVGFGIGVISGIVGAGGA
                     FIIIPVLLALFKLPMNTVVNNSIAIAFISSVGAFFIKLMQGYIPVESAIFLIIE"
BASE COUNT         1016 a          453 c          392 g          750 t
ORIGIN      
        1 atacatcaaa aacattatag gaggtcataa ccatgacact agaaaaacaa ctcaaagagt
       61 atataactaa cttattcaat ctgccaaagg acgaaaaatg ggaatgtgaa tctatcgagg
      121 aagtggcaga taatatcctt cctgatcaat atatcagact tggtccgctt accaacaaaa
      181 tccttcatac gtatacttac tactctgaca cacttcatga aaggcatata taccccttta
      241 tcctctacta tcaaaaacaa cttattgcga ttggttatat tgatgaaaca aacgatatgg
      301 acttcttata tcttcataac acagttatgc cactactaga tcaaagacac ttacttgaaa
      361 aggagaatta taataatgaa taaatggata cacatagctc agataagcgt cacagtcatt
      421 acagaagtta ttacaataat gaaagatata gaaaaggaga aatgagcatg aaacgttata
      481 ttacacgtag tattgccaat tacttgccag caatgttgca gcaacagtta tggaaacttg
      541 tagcgcaacg cgaaaacgaa caattcaagg aactagaaga gattgattac tttcatatat
      601 tccagttcaa tatgcataat agtcaattat atatcaaaca taagcaagaa cgtccagagt
      661 acgtaaaaat tcataaggca aattattcaa aagctatcaa tattaataag gtctacatta
      721 tccgagaaga tgatgtagac ctttcttatt acgtcatgtt gttacctgaa gaatattaaa
      781 taaaggagtt agataaaatg aaatcaatca aaagtgtatt agaaactgaa gcgatattta
      841 gtcaggataa aatgcatcgt tatcttctca agaaaacttg ggatattgat aaagaagtac
      901 ttacaattat aacgatgtat cctcattatg atggtgttat caacgttgac cttacaacac
      961 aacttattgt caataaagta gctgaaaaag atgaatatgg tggcgttaat tttataaatc
     1021 ttttttcaaa tattgatacc cccattaatt taaaacatat cgaaaacagc catgacaagc
     1081 acacggatat tcacattatg aaagctgtca aagaagccga tagtgtttta ttggcttggg
     1141 gttcctacgg aaaaaaacct cttgtggaaa atcgagtgaa tgaagtatta gacatgttaa
     1201 aacctcacag taagaaaatc agtatattaa caaatcctca aacaaatgaa atcatgcatc
     1261 cattaaatcc atacgctaga aaggcatgga caattaaacc attaaaggag actaaataga
     1321 atgaatcaaa catggaaaga agtataccaa tatttaatgc atcaaccaca catcgatgtt
     1381 attaaaggca ttatcgcctt ttcatcaaac aaaaaaaata attcagaatt agatgagcta
     1441 tattccattt atatgaatga tgattctatc acatccattg ttcaccctga cttaatagaa
     1501 agtatagagc ttatccataa tgagtagaaa aagaatagat gttgtcaaag tccaaatggt
     1561 taaagaagat acactttggt atttaaaaag acgtattgaa gaaccaaaag acgctgctga
     1621 tattatgcgt gacttcatag gaaatgctga ccgagaacac ttcattttaa tttgcttgaa
     1681 tagcaaaaat gaacctacac atattgaaac cgtctctata ggaaccatta attttgcggt
     1741 tatacatcct cgagaaatat ttaaaacagc catattaagt aacgcaacgg gtatgattat
     1801 tggccataac cacccaagtg gagacatcac accttctcca ggagatatca aaataactca
     1861 gagaataaaa gagattagtg aaatgatggg cattatatta tatgaccaca taatattttc
     1921 agaaaatgat catcattcaa ttatcaaaaa aattgcactt tctactggta tatatccttg
     1981 cattaatttt ataaaaaatg cccctactga agatataaaa gcaattgcta tgctattgtt
     2041 cactaccgta ttcattggta atttaaataa tgctaataat acaggaatga tgataaatgc
     2101 tccacctgca cccacaattc ccgaaattac accaattcca aatccaacta taataaatag
     2161 caaaggttta gatttcgtct cttgtgtagt aggtttaact ttaataaaca tcaatattaa
     2221 agcaagtatg gcgattatta catataccgt atttacaaaa gtagcattaa acaaactagc
     2281 taaaattgcc cctaacatgc ttccaatcaa cataccccct cccatatata taacaagttt
     2341 aggagagaaa gctggttgtt ttcttgcatt taatgatcca ctaagtgtac tgaaaaatac
     2401 ttgactagag gtaagtcccg aagcaatata tgcactatac gcaggtatac ctattaatgg
     2461 tggcaatata agaatagctg ggtaaataat aattgcgccc ccaataccta ttaatccaga
     2521 tataaatcca cccagtacgc caattagcaa cataatagtc atatttgcta tatccattat
     2581 ttacttttaa ctaataaatt aactgcttca t
//
LOCUS       DANHPA010000182         2585 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.187, whole genome shotgun sequence.
ACCESSION   DANHPA010000182 DANHPA010000000
VERSION     DANHPA010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 2585)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2585)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2585
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.187"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            132..>2585
                     /locus_tag="PTC28_002396"
     CDS             132..>2585
                     /locus_tag="PTC28_002396"
                     /inference="COORDINATES: protein
                     motif:HMM:NF037833.1,HMM:NF038186.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001636252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YPDG domain-containing protein"
                     /protein_id="HDK5717627.1"
                     /translation="MKKFKKPRRLDFLPNKLNKYSIRKFTVGTASILIGSLLYLGVQN
                     QADASEINEQTKAETQGFTNNSLNSDEEDSSVNTVAAQQSSEQNTDVEKTAEAAPFVE
                     EQNNDEQRTTQESNNTEKFSENKVINEELTSTEDISGESAKEDKNIENSNDENQVEEP
                     SAEEKVTENNKTPDAKLHNVIEKDNVLETKVSSQGTSNEDGTVIDTETEETNPPKSPL
                     NTSVESNYVSETNENVTSRDAQFDEVVSQNLPKNFNVLSAKEAEAAITYAQLKAYAEK
                     MNQQPTAALLNLSTSPSNAFYRSALRAVGDTTTQMVTVSGTEHFKKYGDVVHQTYPEE
                     FPNAGTLTAINPVTKPNTGTKGALQFDQQISFDKDFRIKLRVANNNQSNTTDSDGWGF
                     IFTTGSGQDFLDQGGILRDRGMANAAGFKIDTSYNNVGGKADPLDKDKTNNLTNIGAV
                     KIGYGTFVKNGADGTTQQVGTNALGSKDKPVNKIQYADNATDYNDGKFHGQRLNDVIL
                     SYDAASSTLTATYAGKTWQATVNDLGLNKSDKYNFLITSSQMANRNSNGIMRTDLSAA
                     EITIPAEIPQTETHEPGYEEGRTKPNVPVTVPQTGDTTIPPGSQYEIPTGGVPEGWTA
                     EVDPNNGTVTVTPPADATPGTSVDIPVKVTYPDGSSEETPAKVTVVPNDAQDNTPGYE
                     EGRTKPNVPVTVPQTGDTTIPPGSQYEIPTGGVPEGWTAEVDPDNGTVTVTPPADATP
                     GTSVDIPVKVTYPDGSSEETPVKVTVDTPDSGNHDPGYEEGHTKPNVPVEVPQTKDPN
                     VPPGTTFEIPPAGIPEGWTA"
BASE COUNT         1007 a          443 c          541 g          594 t
ORIGIN      
        1 gtatattcga tttggtgtta atgttaattg tagaagattc atattttagg aattgttgtt
       61 tttataaaaa tataccttta acaacaataa cttaagtgtg tttcaatctt atttaggagg
      121 taattcagga aatgaaaaag tttaaaaagc caagaagact tgatttttta cctaacaaac
      181 tcaacaagta ttccatcagg aaattcacag tgggtacagc atcaatctta attggatcat
      241 tgctgtattt gggtgttcag aatcaagcag atgcatctga aattaatgaa cagacaaaag
      301 cagaaacaca agggttcaca aataattcat taaactcaga tgaagaagat tcttcagtga
      361 atactgtagc ggcgcaacaa tctagcgaac aaaatacaga tgtagaaaaa acggcggaag
      421 ctgctccgtt cgttgaagaa caaaataatg atgagcaaag aaccactcaa gaaagtaaca
      481 atacagaaaa attttctgaa aataaagtca ttaacgaaga attaacttca actgaagaca
      541 tatcaggtga atcagcaaaa gaagataaaa acatcgaaaa tagcaatgac gaaaatcaag
      601 ttgaggaacc atcagcagaa gaaaaagtga ctgaaaataa taaaacacct gatgctaaat
      661 tgcataatgt tattgagaag gataacgtat tagaaacaaa agtgtcaagt cagggaacgt
      721 ctaatgagga tggcacagtc attgatacag aaacagagga gacgaatcca ccaaaaagtc
      781 ctctaaatac ttctgtagaa agtaattatg ttagtgagac aaatgaaaat gtaacatcaa
      841 gagatgcgca atttgatgaa gtagtgtctc aaaacttacc aaaaaacttt aatgtattat
      901 cagcaaagga agctgaagca gcaattacct atgcacaact caaggcatat gcagagaaga
      961 tgaatcaaca accaacagcg gcattattaa acttaagtac gagtccatct aatgctttct
     1021 atagatctgc tttaagagct gttggtgata caacaactca gatggtaacg gtttctggca
     1081 ctgaacattt caaaaaatat ggtgacgttg tacaccaaac ttatccagaa gaattcccaa
     1141 atgcaggtac gttaacagct attaatcctg ttacaaaacc gaatacaggg acaaagggtg
     1201 ctttgcagtt tgatcaacaa ataagttttg ataaagattt taggattaaa cttcgtgtag
     1261 caaataataa ccagtcgaat acaactgatt cagatggatg gggatttatc tttacaacag
     1321 gtagtggaca ggatttctta gatcaaggcg gtattttgag agacagaggt atggcaaatg
     1381 ctgctggatt taaaatcgat acgtcttaca ataatgtagg aggtaaagcg gatcctttag
     1441 ataaagataa aacaaataat cttactaaca ttggtgctgt taagataggc tatggaacat
     1501 ttgttaaaaa tggtgctgat ggtacaacac agcaagttgg aacaaatgct ttaggcagta
     1561 aagataaacc agttaataaa attcaatatg cagataacgc tacggattat aatgatggaa
     1621 aatttcatgg tcagcgttta aacgatgtca ttcttagtta tgatgccgct tctagcacac
     1681 taacggcaac atacgcaggt aaaacttggc aagcaactgt aaacgatttg gggttaaata
     1741 aaagtgataa atacaatttc ttaattactt caagtcaaat ggcaaataga aattctaatg
     1801 ggataatgag aacagatttg tctgcagcag aaataactat tcctgctgaa attccacaaa
     1861 cagaaacaca tgaaccagga tatgaagaag gacgcacaaa gccgaacgta ccggtaacag
     1921 tgccacaaac aggagatacg acaataccac caggaagtca atatgagatt ccaacaggtg
     1981 gtgttccaga aggctggaca gcggaagtag atccaaataa tggaacagta acagtaacgc
     2041 caccggcgga tgcgacacca ggaacatcag tagatattcc ggtgaaagtg acatatccgg
     2101 atggatcaag tgaggaaaca ccggcgaaag tgacagtagt accgaatgat gcacaagata
     2161 acacaccggg atacgaagaa ggacgtacaa agccgaacgt accggtaaca gtgccacaaa
     2221 caggagatac gacaatacca ccaggaagtc aatatgaaat tccaacaggt ggtgttccag
     2281 aaggctggac agcggaagta gatccagata atggaacagt aacagtaacg ccaccggcgg
     2341 atgcgacacc aggaacatca gtagatattc cagtgaaggt aacatatcca gatggatcaa
     2401 gtgaggaaac accagtcaaa gtaacagtag atacaccaga tagtggtaac cacgatccag
     2461 gatacgaaga aggacataca aaaccgaacg taccagtgga agtgccacaa acgaaagatc
     2521 caaatgtacc accaggaaca acatttgaga taccaccagc aggtattcca gaaggttgga
     2581 cagcg
//
LOCUS       DANHPA010000183         2561 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.188, whole genome shotgun sequence.
ACCESSION   DANHPA010000183 DANHPA010000000
VERSION     DANHPA010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 2561)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2561)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2561
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.188"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            59..1177
                     /locus_tag="PTC28_002397"
     CDS             59..1177
                     /locus_tag="PTC28_002397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002502341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HDK5717628.1"
                     /translation="MAELMRGLEGVIAAETKISSIIDSQLTYAGYDIDDLTENAQFEE
                     IVFLLWNYRLPTKKELSELKEKLFEYMTLNPRMYSHFEEYTTDKVHPMTALRTSVSYL
                     AHFDENADDNDEEALQERAIRIQAKIASLVASFARVREGKEPVKPDPALSYAANFLYM
                     LRGEKPTDVEVEGFNKALILHADHELNASAFTARCAVSSLSDMYSGVTAAVSSLKGPL
                     HGGANERVMQMLTEIGSVDNVEGYLQKAFANKDKVMGFGHRVYKNGDPRAKYLKEMSQ
                     KITNETGQSELFDVSVKIAEIMKEEKGLLPNVDFYSATVYHSMGIDHDLFTPIFAVSR
                     TSGWTAHILEQLRDNRIMRPRATYIGDVNRKYVPIEER"
     gene            1223..2485
                     /gene="icd"
                     /locus_tag="PTC28_002398"
     CDS             1223..2485
                     /gene="icd"
                     /locus_tag="PTC28_002398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HDK5717629.1"
                     /translation="MSEKIVKTDSGLQVPNQPIVPFIIGDGIGPDIWKAASRVIDAAV
                     EKAYAGEKKIDWKEVLAGQKAYDQTGEWLPAETLDTIKEYLIAIKGPLTTPIGGGIRS
                     LNVALRQELDLFNCLRPVRWFKGVPSPVKHPEQMDMVIFRENTEDIYAGIEFKEGSEE
                     VKKVIDFLQNEMGAKNIRFPETSGIGIKPVSKEGTERLVRAAIQYAIDNNRKSVTLVH
                     KGNIMKFTEGAFKQWGYDLAENEFGDQVFTWQQYDRLVEEKGKDEANKIQDQAEKDGK
                     IIIKDSIADIFLQQILTRPADHDVVATMNLNGDYISDALAAQVGGIGIAPGANINSET
                     GHAIFEATHGTAPKYADLDKVNPSSVLLSGVMLLEHIGWQEAADLITNSVEKTIASKV
                     VTYDFARLMEGATEVKTSEFADELIKNL"
BASE COUNT          897 a          416 c          547 g          701 t
ORIGIN      
        1 tataatagtt attgaaagcc attacaaaga acgaatataa agtaaagggg aaattcatat
       61 ggcagaatta atgagaggtc tagaaggggt aatcgcagct gaaacaaaaa tcagttcaat
      121 tatcgatagc caacttacat atgcgggcta cgatatagat gatttaactg aaaatgcaca
      181 atttgaagag attgttttct tattgtggaa ttatcgatta cccacgaaaa aagaattgtc
      241 agaattaaaa gaaaaattat ttgagtatat gactttaaat ccaagaatgt atagtcattt
      301 tgaagaatat acgactgata aagtacatcc tatgacggct ttacgtacat cggtttctta
      361 tttagcacac tttgatgaaa atgccgatga taacgatgaa gaagcattac aagagcgtgc
      421 gattcgtatc caagccaaaa tcgcatcact cgtcgcttca tttgcaagag taagagaagg
      481 taaagaaccg gttaagcctg atcctgcttt aagttatgca gcaaatttct tatatatgct
      541 tagaggcgaa aaaccgactg atgttgaggt agaaggcttt aataaagcat tgattttaca
      601 tgcggatcac gaattgaatg cgtctgcttt tacagcgcgt tgtgcggtgt catcattatc
      661 agatatgtat tcaggtgtca ctgctgccgt atcatcatta aaaggaccgt tacatggtgg
      721 tgcaaacgaa cgcgtcatgc aaatgttgac tgaaatcgga tcagtggaca acgttgaagg
      781 ctacttacaa aaagcatttg caaataaaga taaagtaatg ggcttcggtc accgcgtgta
      841 taaaaatggt gatccacgtg cgaaatactt gaaagaaatg agccaaaaaa tcactaatga
      901 aactggacaa agtgaattgt tcgatgtttc tgttaaaatt gcagaaatca tgaaagaaga
      961 aaaaggatta ttacctaacg ttgacttcta cagtgcgaca gtatatcaca gtatgggcat
     1021 tgatcatgat ctctttacac caatttttgc ggtaagtcgt acatctggtt ggactgcgca
     1081 catcttagaa caattaagag ataatagaat tatgcgtcct cgtgcaacat atatcggtga
     1141 tgttaaccgt aaatatgtac cgattgaaga acgctaatga agtctatata ttataaagtt
     1201 tcaaaattcg gaggtattaa acatgagtga aaagattgta aaaacggaca gcggattaca
     1261 agttccaaat caacctatcg taccatttat catcggcgac ggtattgggc ccgatatttg
     1321 gaaagcagca agtcgtgtca tcgatgctgc cgtagaaaaa gcttatgccg gtgagaaaaa
     1381 aattgactgg aaagaagtat tagccggtca aaaagcatac gaccaaacgg gtgaatggtt
     1441 accagcagaa acgttagata caattaaaga atatttaatt gcgattaaag gaccattaac
     1501 aacgccaatc ggtggcggta tccgttcatt aaacgtagcg ctacgtcaag aattagactt
     1561 atttaactgt ttacgtccag tgcgttggtt taaaggtgta ccttcaccag tgaaacatcc
     1621 agaacaaatg gacatggtca tcttccgtga aaatactgaa gacatttacg caggtatcga
     1681 atttaaagaa ggtagcgaag aagttaaaaa agtgattgat ttcttacaaa atgaaatggg
     1741 cgctaaaaat attcgcttcc ctgaaacttc tggaatcggt attaagccag tatctaaaga
     1801 agggacagag cgtttagtac gtgcagccat tcaatatgca attgataata accgtaaatc
     1861 agtaacactt gtgcataaag ggaacattat gaagtttact gaaggtgcgt tcaaacaatg
     1921 gggttatgat ttagcggaaa atgagttcgg cgatcaagta tttacatggc aacaatatga
     1981 tcgtttagtt gaagaaaaag gaaaagacga agcgaacaaa attcaagatc aagctgagaa
     2041 agatggcaaa atcattatta aagattctat tgcagacatc ttcttacaac aaattttaac
     2101 acgtccagct gatcacgatg ttgttgcgac aatgaacctt aacggtgact atatttcaga
     2161 tgcattagct gcgcaagtcg gtggcattgg tattgcacca ggtgcgaaca ttaactctga
     2221 aacaggtcat gcaattttcg aagcgacgca cgggacagcc ccgaaatatg ctgatttaga
     2281 caaagtgaat ccttcatcgg tattactttc aggtgtgatg ttgttagaac acataggctg
     2341 gcaagaagct gcggatttaa ttactaattc tgtagaaaaa acgattgctt caaaagttgt
     2401 gacatatgac tttgcgcgtt taatggaagg tgcaactgaa gtaaaaacgt cagaatttgc
     2461 agatgaattg attaaaaatt tataataagt tgattaaaag gccgggaatt tcctggccct
     2521 ttatttatgt taaaagcacg aatgaaattc aaacattgga t
//
LOCUS       DANHPA010000184         2537 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.189, whole genome shotgun sequence.
ACCESSION   DANHPA010000184 DANHPA010000000
VERSION     DANHPA010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 2537)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2537)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2537
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.189"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..1795
                     /locus_tag="PTC28_002399"
     CDS             <1..1795
                     /locus_tag="PTC28_002399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717630.1"
                     /translation="DGYNRFNINHKTIYFTRDFRYYSLSFQDYHIFILGELVDVRDSK
                     KPVNAIVSDLLQYPIDSDSFLNEMSFFNGSYGLFIAHEENLYFYNDATSFLSLYYHNE
                     KPVYASHSKLLHQLIQQIFGVEERLIKDKMRGFLDFSKFENIYKFNSNMRFELNHHEL
                     KRVYPIDDYQTQEIAHVVEQVIPLMTEMVAFVYRLDRPVVMSLTGGYDSRVSLALLKN
                     KLSHTLFFTYLRTDEQKITRAQKNIYDTDQKAVQFLVDQLNLNHHFFNIDNNQGKKEV
                     AELYAHYESSHSKNMINHYSQDAQFQGVAHVKSTIFELAKGIRPLKLEAQHHDIYDFV
                     DELKKWSPIKEKAWIQQALTQFINRNALFSFLDKGYHPCDVLYLESKMNGWHSTIIQE
                     SDPYMDVYNLINCRFILFQLICMNYEDRKNLAFHKSVIEQRWPLLHFFGVNTKVNLYE
                     KYQMIEKQLEECQTNKINAQNMKLSYETQDFNRVFQQQRVHFKLKRRKFVESERYHLN
                     IENQSGESVQISMRTFYKNNKGRARIFITIDNMKYDIVDLAYESVEKSIAPGSKMCIA
                     IQSTKDIDKKSWIEAAKFEIKEIYANKKVIE"
     gene            1792..>2537
                     /locus_tag="PTC28_002400"
     CDS             1792..>2537
                     /locus_tag="PTC28_002400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDK5717631.1"
                     /translation="MRAIIEIFKEQIVNLPKISKLAIYNMKSQYANHYLGIFWNILQP
                     VLQVIIYYIVFGLGLRGSSGLVMGVPFIVHLISGLFPWLFISQGINSGASAIQKNIGL
                     LAKMKFPSSIFISIALTNNMINLLITTTIVFVISVINHYVPWWHYFWFVYFMIGAFSI
                     IFGISLIMSTLTVIVRDTKNLLQNIIRMLFFLTPIFWVLEEQHGILAKLASLNPFAYL
                     IGVYRTALVHSQTAVYGTWSDHIYFWVTTL"
BASE COUNT          834 a          383 c          445 g          875 t
ORIGIN      
        1 tgatgggtac aatcgtttca atatcaatca caaaacaatt tattttacta gagattttcg
       61 gtattattcg ttgtcatttc aagattatca tatatttatt cttggggagc tcgtagatgt
      121 gagagacagc aagaaaccgg ttaatgcgat tgtaagtgat ttgctacaat accccattga
      181 ttctgattct tttctaaatg agatgtcttt tttcaatggt agttacggat tatttatcgc
      241 tcatgaagag aacttgtatt tttataatga tgcaacttct tttctttcgc tgtattacca
      301 caatgaaaag ccggtttatg cctctcattc gaaattgtta catcaattga ttcaacaaat
      361 ctttggtgta gaagagagac ttattaagga taaaatgcgc ggcttcttag attttagtaa
      421 atttgagaac atttataaat ttaattctaa tatgcgtttt gaacttaatc atcatgaatt
      481 gaaaagggta tatcctattg atgattatca gacacaagaa atagcacatg ttgtagagca
      541 agtcattcct ttgatgacag agatggttgc gtttgtttat cgtcttgacc gtcctgttgt
      601 gatgtcactt acgggcggtt atgattcacg ggtgtcactt gcattgctga aaaacaagct
      661 atcacatact ttatttttca cttatttaag aactgatgaa caaaaaatta ctcgtgcaca
      721 aaagaatatt tatgatactg atcaaaaagc tgtacaattt ctcgttgatc aacttaattt
      781 aaaccatcac ttttttaata ttgataacaa tcaaggaaaa aaagaagtcg ctgaattata
      841 cgcacattat gaatcgagtc attctaaaaa tatgattaat cactatagcc aagatgctca
      901 gtttcaaggt gtagcccatg tcaagtcgac aatttttgag cttgcaaaag ggataagacc
      961 tttgaaactt gaagcgcaac atcatgacat ctatgacttt gtagacgagc tgaaaaaatg
     1021 gtcgcctatc aaagagaagg cgtggattca acaagcatta acccaattta tcaatagaaa
     1081 cgcactcttc tcatttttgg ataaagggta tcatccatgt gatgtattat acctagagtc
     1141 taaaatgaat ggttggcata gtaccattat tcaagaaagt gatccttaca tggatgtgta
     1201 taacttaatt aattgtaggt ttattttatt tcaattgata tgtatgaatt acgaagatag
     1261 aaagaatctt gcatttcaca agtcagtgat tgaacaacgc tggccgttac ttcatttttt
     1321 tggtgtaaat acaaaagtca atttatatga aaagtatcaa atgattgaaa aacagctgga
     1381 agaatgtcaa acaaataaaa taaatgcaca aaacatgaaa ctcagttatg aaacacaaga
     1441 ttttaatcgt gtatttcaac agcaaagggt gcattttaaa ttgaagcgta gaaagtttgt
     1501 tgagagcgaa cgatatcatt taaatattga gaatcaaagt ggtgagtcag ttcaaatttc
     1561 gatgcgtact ttttataaaa ataataaagg cagagcacgt atatttatca ctattgataa
     1621 catgaaatac gatatcgttg acttagcgta tgaaagcgtt gaaaaatcaa tagcaccggg
     1681 ttcgaaaatg tgcattgcaa tccagtcgac taaggatatc gataagaagt cttggataga
     1741 agcagctaaa tttgaaatca aagaaattta cgcaaataag aaggtcatag aatgagagca
     1801 atcatagaaa tatttaaaga acaaattgtc aatttaccta aaatttctaa attagctatc
     1861 tataacatga aaagtcaata tgccaatcat tatttaggta tcttttggaa tattttgcaa
     1921 cccgttctcc aagtgattat ctactatatt gtttttggtc ttggattaag aggaagttcc
     1981 ggattagtga tgggtgtgcc atttattgtt cacttgattt caggtctatt tccttggctt
     2041 ttcatttccc aaggtatcaa ttctggtgct tcagcgattc aaaaaaatat tggtttgtta
     2101 gctaagatga aattcccgtc ttctattttt atatctattg cactgacgaa caatatgatt
     2161 aatttactga ttacaacaac catcgttttt gtaatttctg tgattaacca ttatgtacca
     2221 tggtggcatt atttttggtt cgtttatttt atgataggag ccttttcaat tatctttggc
     2281 atttctttaa taatgagtac gcttactgtt attgtaagag atactaaaaa tttattgcaa
     2341 aatattattc gaatgctttt ctttctcaca cctatttttt gggtgcttga ggaacaacat
     2401 ggcattttag caaagttagc aagtttgaat ccttttgcat atcttattgg tgtgtatcgt
     2461 acagcattag ttcactctca aacagccgtt tatggcactt ggtctgatca tatctatttt
     2521 tgggtcacaa cgctatt
//
LOCUS       DANHPA010000185         2533 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.190, whole genome shotgun sequence.
ACCESSION   DANHPA010000185 DANHPA010000000
VERSION     DANHPA010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 2533)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2533)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2533
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.190"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..327
                     /gene="tnpA"
                     /locus_tag="PTC28_002401"
     CDS             <1..327
                     /gene="tnpA"
                     /locus_tag="PTC28_002401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002458050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HDK5717632.1"
                     /translation="IIEAEACKDHIHMLVSIPPKLSVSQLVGYLKGKSSLMIFDRHVH
                     LKYRYGDRKFWCKGFYVDTVVRNKKVIEEHIRNQLQEDIVAEKRTMMEYIDSFTGEEN
                     KRLRKK"
     gene            complement(513..1768)
                     /locus_tag="PTC28_002402"
                     /pseudo
     CDS             complement(513..1768)
                     /locus_tag="PTC28_002402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614739.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            1911..2533
                     /locus_tag="PTC28_002403"
                     /pseudo
     CDS             1911..2533
                     /locus_tag="PTC28_002403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002478735.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
BASE COUNT          981 a          367 c          450 g          735 t
ORIGIN      
        1 ataatagaag ctgaagcatg taaagatcat atacacatgc tggtgagtat cccaccaaaa
       61 ctaagtgttt ctcaattagt aggatattta aaaggtaaaa gtagtttaat gatttttgat
      121 agacatgtac atttgaaata tagatatggg gatagaaaat tttggtgcaa aggattttat
      181 gtagatacgg ttgtaagaaa taaaaaggta atagaagaac acattcgaaa tcaattacaa
      241 gaggatatcg tagcagaaaa acgcacaatg atggaatata tagattcatt tacaggggaa
      301 gagaacaaaa ggttgagaaa aaaatagaac ccttttaagg ggcgctgaga aagtagtaca
      361 gttggctgct cttctcagtg cccttacaag ggatggtcag taacagagga tttcagccga
      421 agaacaaact acccgttcac acagagggtt tgattcagcc agaagaattg taaacattgt
      481 agaaagcaat atcttctgat ggtcataaaa agttactcta tggacttaac tttattttga
      541 gaaggggttt gaagtttaaa gttcccatat attgaaagat agatgaaaaa agcaccgata
      601 cttagaaaaa taaacatata gatgcccatg cctatagagg agaggtaaac acctaatata
      661 atccctaatc gtgcaatgag ttctgacaaa ttaaaaccta atgcattaaa agcagaatat
      721 gtgcctcttt tattttctgg aatgattttg aagcgctgct catctaaaat tggggaataa
      781 atgatttctc caatggtagc tatgaacatc aataaaatga gtgaataaaa ctcgtttaaa
      841 taggttatac tcgcatagcc gatgacgtaa aatatgagac caagtattaa tgattttttg
      901 actgagagtt ttaaaataat ttttgtcacg aaatatgtac atgtaatcac aacaattgta
      961 ttcacaatca taagaagaga atacaattta acgccgtcta tattaaaaaa agcaaccgaa
     1021 atagtattaa attctgcttt taaacgaata gcaatatacg aagacgcgga tagttcgccc
     1081 atcatcataa tactaaaccc taaggtcatc accataaaac gccgatcttt gaatacctgt
     1141 tcataacttt ttaaaacatt gaaagggtgc attaaaagtg atcgcttttc agtcacatgg
     1201 gtctctttgg ggagccatct taataaagaa agaaatacaa gtataaaaat caaaaatgca
     1261 ataaagaaaa gtgtcgattt gttattatga taaagtatcc ccccattaaa gcaccaaatg
     1321 ctaatgcaag attcgtcaac caataatcaa ttttataaat gtacctttca acatcaggtg
     1381 tgattgcatc cataataatg gtatccattg cgggatattg aaccccccac acaatattat
     1441 aaatcgcata acaaatgcta aagaatataa tatatgaaga gccatttaat atcattatgc
     1501 ccatcaaaag cagcatgatg gccatgacga attgatagat taagacagct ttctttttag
     1561 gaaaagtctc tatcaaatag ccgccaatca tagatactgg aaaattagca accacaagta
     1621 atgtgagaaa gatgccagca aatttgggat tcgccatatc acttaaatat agagcgataa
     1681 aaggtaaaaa agcactcgtg atgagttctt gaaaaaagtt acttatcaat cttactttta
     1741 aagttacact taaatttctc caaatcataa ttctcacctt atagattgtt tatagtcttc
     1801 tatgaaatag tatcacacct taaaaagact gacaatttcc aattgtaaga attaagagaa
     1861 cactttatag tgtgtttaga aaatcaatgg aggggtttta agagaaaaac atgaatatat
     1921 taaatgcatc taatgtcttt aaaagttatt tggatgagct tctattcgat aatataaaat
     1981 taacaattaa cacaggtgat attacagtat tgattgatcc caatggagaa ggacaaacaa
     2041 cattattaaa aattttatca ggtatagaaa gtcctacaac aggtgatgtt agttggaaga
     2101 aagggttaga aattagctat ttagaacaat cgcctcatta tgaagataac aaaacgattt
     2161 atcagtgttt aaagtcggtt tttactgagt taaatgccat atcagataat ttaagaaagt
     2221 tagagtcaaa aatgagtgaa cctacagaag atattgatag tgtaatttcc tattatggag
     2281 aattacaatc ttattttgag gaaagagctg gttatgaaat agattctcaa atcagaaaag
     2341 ttgtacacgg ataaaatata gaatatttac ttgaaatgaa ttggggtgac ttatcagggg
     2401 gtgaacgtac aaaaattggc atcgctcaat cattgattaa accaactgga ctgctacttt
     2461 tagatgaacc tactaatcac ttagatatag aatcaaaaga aacgatagaa gatgcgttat
     2521 tagattttga agg
//
LOCUS       DANHPA010000186         2516 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.191, whole genome shotgun sequence.
ACCESSION   DANHPA010000186 DANHPA010000000
VERSION     DANHPA010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 2516)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2516)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2516
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.191"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(320..1174)
                     /locus_tag="PTC28_002404"
     CDS             complement(320..1174)
                     /locus_tag="PTC28_002404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDK5717633.1"
                     /translation="MQNVKAIFLDMDGTILRSNNRASEETAQILNQLREEGYKVFLAT
                     GRAYEEIHLLIPDDLSFDGIISSNGTLGHIGESVLFEHDLNVEAVNSIVTAAQQDGIY
                     YEVFPFHDPRFALEQDKAWMLKMIDGDKPEAVHQSEWLSRHEAIEGKLTWRADIPADV
                     GYSKIYLFHPDLAHIQQFREKMMAQTEEWNIEVSNSTPNNVETMAYHINKGTGIEEMC
                     AHYNIAISDTLVIGDSDNDRTMFEKGAVTVAMTNAAPHIKAMTDYETDVDNNADGAAQ
                     FLKKHLLK"
     gene            complement(1249..2028)
                     /locus_tag="PTC28_002405"
     CDS             complement(1249..2028)
                     /locus_tag="PTC28_002405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDK5717634.1"
                     /translation="MLFSIQQGAKRKSGRTLLSDINWQVNEGECWLVYGLNGAGKTTL
                     LNMINAYDFLTAGEIQLFGMVPGQRGYSAHHVREHIGYVSGLLRDRFSAGEIVRDVVL
                     SGIFKSIGLYEQPTETQVALAREMLALLNMQAFETQYFGLLSTGEQQRVLFARALMNE
                     PSLLILDEPANGLDFVGREQLMATLSQIRQHFPQTVVIYVSHFIEEVTEDFTHALLLK
                     QGTIQNQGRIEAVLTNHTLSQLFDIPVALYQHHGRYQIVKV"
     gene            complement(2136..2402)
                     /locus_tag="PTC28_002406"
     CDS             complement(2136..2402)
                     /locus_tag="PTC28_002406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717635.1"
                     /translation="MTQYINNYYFSLVYTTLLVFFSLPLTHIYTQNVLLYGLMTFVIL
                     LSTVVVEMTLNRTHDLKTKAKRMLWTIVPINVIVFSIFIFFIFK"
BASE COUNT          757 a          519 c          416 g          824 t
ORIGIN      
        1 actatcaaag ttaaatgacg ttattttgtt ttcaacttca tccctcggga gtctcatcca
       61 ttttggcaat cgaatcataa caacactaca aaatcgtgta gtgtttgaag ccaacagtat
      121 catttatata atcaatgcat taaaaattgt ataccgataa acaaaatctt ttatcatttg
      181 ttatcgttaa catacattaa atttttgaaa ggggctgaga tgtttttgta tctcaggctc
      241 tttttatgta aaaaaaccat caaacattgt tgtcttgttg tttgatggtt tttcatattt
      301 gaattgtttt ttgacatcgt tattttaata aatgcttttt gagaaattgt gctgccccgt
      361 ctgcattgtt atcgacatct gtttcataat ctgtcattgc tttaatgtgt ggtgcagcgt
      421 tagtcatcgc tacagttaca gcaccttttt caaacatcgt ccgatcgtta tcgctatctc
      481 caatgactaa cgtatccgat attgcgatat tgtaatgcgc gcacatttct tcaatacctg
      541 tacctttatt gatgtgatat gccatcgttt caacattgtt cggtgttgaa ttcgacactt
      601 caatattcca ttcttctgtt tgcgccatca tcttttcgcg aaattgttga atatgtgcta
      661 aatcaggatg aaataaataa atttttgaat accctacatc agctggaata tcagcgcgcc
      721 atgttaactt gccttcaatc gcttcatgtc gagaaagcca ctcactctga tgtacagctt
      781 ctggtttgtc accgtctatc attttcagca tccacgcttt gtcttgttct aaagcaaatc
      841 gcgggtcatg aaatggaaat acttcataat atattccatc ttgttgcgca gctgtgacaa
      901 tgctgttcac ggcttcaaca ttcaagtcat gttcaaacaa cactgattct ccaatatgtc
      961 cgagtgttcc attggaagaa ataatgccat caaacgataa atcatctgga atgagtaagt
     1021 gaatttcttc atacgcacgt cctgtcgcca agaacacttt atatccctct tcgcgcaatt
     1081 gattcaaaat ctgtgctgtt tcttcagaag ctctgttgtt actacggaga atcgtgccat
     1141 ccatatctaa aaagatcgct ttcacgtttt gcatagttac tttcctttca ttcataaatt
     1201 atatgttcat tgtgtcacca aaaaagatat ggtgcaacaa tcaactcgct aaactttcac
     1261 aatttgatat cgaccgtgat gttgatacaa tgcgacaggt atatcaaaaa gttgagacaa
     1321 tgtatgattt gttaataccg cctctatgcg cccttgattt tgtattgtcc cttgcttaag
     1381 taaaagtgcg tgtgtaaaat cttcggtcac ttcttcaata aagtgtgata cataaatgac
     1441 taccgtttgt ggaaaatgtt gacgaatctg tgataaagtt gccatcaatt gttctcgtcc
     1501 aacaaaatct aaaccgtttg ctggctcatc taaaattaat aatgaaggtt cattcatcaa
     1561 agcacgcgcg aataaaacac gttgctgctc tcctgtagat aataacccga aatattgtgt
     1621 ttcaaatgct tgcatattga gtaatgccaa catctctcgc gccaatgcga cctgtgtctc
     1681 agtcggttgt tcatagagtc cgattgattt aaaaatacca ctcaacacga catctcggac
     1741 aatttcacct gctgaaaagc gatctcgtaa taaaccagac acataaccaa tatgctcacg
     1801 aacatgatgt gccgaatagc cacgttgacc tggaaccatg ccaaataatt gaatctcacc
     1861 cgctgttaaa aagtcgtaag cattaatcat attcagtagt gtcgtcttac ctgcaccgtt
     1921 caagccataa actaaccaac attctccctc gttcacttgc cagttaatgt cggataataa
     1981 tgttcgccca cttttacgtt tcgcaccttg ttgtatagaa aataacatgt gcccaccccc
     2041 atgttgcata ttagttttat catagcaaaa tttcaggttt gtaccaatag cgtggggaaa
     2101 agtcgctgaa aaaggccagg aaacacttcc cagccttact taaaaataaa gaagataaat
     2161 attgaaaaaa caatcacgtt aattggtaca atcgtccata acatccgttt cgctttcgtt
     2221 tttaaatcgt gtgttcggtt taacgtcatt tcaacgacca cagtactgag taaaatcacg
     2281 aaagtcatga gtccgtacag caacacattt tgcgtataaa tgtgagtgag tggcaatgaa
     2341 aaaaatacga gcaacgttgt gtaaacgagt gaaaaataat agttgttaat gtattgcgtc
     2401 atccaaagca cctctatcat cagtttgatt catattatta cttatcatat accctcatat
     2461 gcattcatta attgaagtta ttcaaattat gacatctcta aaaaatgcga tagctt
//
LOCUS       DANHPA010000187         2465 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.192, whole genome shotgun sequence.
ACCESSION   DANHPA010000187 DANHPA010000000
VERSION     DANHPA010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 2465)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2465)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2465
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.192"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(1..251)
                     /locus_tag="PTC28_002407"
                     /pseudo
     CDS             complement(1..251)
                     /locus_tag="PTC28_002407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728793.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
     gene            complement(273..467)
                     /locus_tag="PTC28_002408"
                     /pseudo
     CDS             complement(273..467)
                     /locus_tag="PTC28_002408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000159527.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
     gene            662..877
                     /locus_tag="PTC28_002409"
     CDS             662..877
                     /locus_tag="PTC28_002409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000957143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HDK5717636.1"
                     /translation="MLTNLEEVRKQKNVTLVDIADLLKIRYQTVSDKINGISDFKFGE
                     ALLIKNTFFPEYEIEYLFSREKEKVTT"
     gene            893..1648
                     /locus_tag="PTC28_002410"
     CDS             893..1648
                     /locus_tag="PTC28_002410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001148636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /protein_id="HDK5717637.1"
                     /translation="MQTLQNKPDIGKMFNIQEKENGEIAISGRELHQALEVSTRYDKW
                     FERMAEYGFESGTDFISQVEKVHGQKRARTYEQVNHILTLDTAKEIAMIQRSEPGKRA
                     RQYFIQVEKAWNSPEMVMQRALKIANNTILQLETQIERDKPKIVFADAVATTKTSILV
                     GELAKIIKQNGIDIGQRRLFEWLRQNGFLIKRNGVDYNMPTQYSMERGLFEIKETTIS
                     HSDGHTSISKTPKVTGKGQQYFINKFLSEKVTT"
     gene            1662..1823
                     /locus_tag="PTC28_002411"
     CDS             1662..1823
                     /locus_tag="PTC28_002411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014533246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717638.1"
                     /translation="MEQTANYRIYVEENECNGYVIYANSMSEVYELIKKVDRFTEIKI
                     SPSEKKGVK"
     gene            complement(1827..2090)
                     /locus_tag="PTC28_002412"
     CDS             complement(1827..2090)
                     /locus_tag="PTC28_002412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002487566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
                     /protein_id="HDK5717639.1"
                     /translation="MNSYIISYDLNDHKDYPKLISRIKDYPNAERINKSVWFVNSVFS
                     AKEIRDELKLFVDNDDSLFVAKLTGEAAWSNVICDSKHLKDYL"
     gene            2147..2341
                     /locus_tag="PTC28_002413"
     CDS             2147..2341
                     /locus_tag="PTC28_002413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000390105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717640.1"
                     /translation="MQEQNKKVIYYYYDEEGNRRLWSVNNLNESVVSGYKARIEFFKK
                     KNPDVDNLFIQIDGVEFKLL"
BASE COUNT          922 a          391 c          427 g          725 t
ORIGIN      
        1 tcaccattca cttgcaatgc aaagtcgtgg ttaggtatgt gtccgttgta ttgcgtcgtg
       61 aactctacac catctattaa cgtttctcca gtacctgccg aagcatagcc atatacagcg
      121 acctcttcgg atattacgtt gtgtgaattt atatgtaaga ctttgttatt ttgctcattt
      181 aattgctcgt tagcaaagtc cagtacgcgt ttttgacggg gaggtgcgag tttgattaat
      241 gtagtgattg attcactaat aattgtatca tctaaatcca taagattttc aggcttaata
      301 ttcaaacctt tacaaatttt tattacgtta tctaccttcg cattaaaaac tcctctttct
      361 agaatagaac gaacagtcgt gtaagctaac ccgatgtctt ttgaaaaagc tttaaccgat
      421 cctgatttca tttccattaa atgttttaag tgtttttctt tttccatttt tagtcacctc
      481 atttccgttt ctacttatat aataacatgc gaaaaatcgt atatcaatat aaagataata
      541 aaaaaatacg aaatttagta ttgacttggt acgaaaattc gtatatagtg tagttaagcg
      601 cttcaagagt gcttgttttt aaagtctaaa atacgaaaat tcgtattaag gaggaggtac
      661 tatgttgact aacctagagg aagtcagaaa acaaaaaaat gtgactctag tggatatcgc
      721 agatttatta aagattcgat atcaaacagt gtcagataag attaacggta tttcagattt
      781 taaatttgga gaagcattgc ttattaaaaa cactttcttt ccagaatatg aaattgaata
      841 tctgttttcg agagaaaaag aaaaagtcac aacttaaaaa ggaggataaa caatgcaaac
      901 attacaaaac aaacctgaca tcggaaagat gttcaatatt caagaaaaag aaaatggaga
      961 aattgcaatt agtggtcgag aacttcatca agcattggaa gtttcaacta gatacgataa
     1021 gtggtttgaa agaatggcag aatacggttt cgaaagcgga acagatttca tttcacaagt
     1081 cgaaaaagta cacggtcaaa aaagggcgcg tacttacgaa caagttaatc atattctcac
     1141 actagacact gcaaaagaaa tcgcaatgat tcaacgaagt gaaccaggta aacgtgcaag
     1201 acaatatttc atccaagtcg aaaaagcatg gaacagtcct gaaatggtta tgcaacgcgc
     1261 tttgaaaata gcaaataata caatcttgca actagaaact caaattgaaa gagataaacc
     1321 taaaatcgta tttgcagatg ctgtagccac aactaaaaca tcgattctgg ttggtgagtt
     1381 agcgaagatt attaaacaaa acggcatcga tattggtcaa cgtagattat tcgaatggtt
     1441 acgtcaaaat ggatttctca ttaaacgtaa tggtgtagat tacaacatgc caactcaata
     1501 ctcaatggaa cgaggtttgt ttgaaatcaa agagactaca atcagtcatt ctgacggaca
     1561 tacatcgatt agtaagacac ctaaagtcac tggaaaaggt cagcaatatt tcattaataa
     1621 atttttgagt gaaaaagtca caacttaaaa aggaggatac catggaacaa actgctaact
     1681 atagaattta cgtagaagaa aatgaatgca atggatacgt aatatatgca aacagtatga
     1741 gcgaagttta cgaattaata aaaaaagtag atagatttac agaaattaaa ataagcccct
     1801 cagaaaagaa gggcgtgaaa taaaaactag agataatctt tcaaatgctt agaatcgcat
     1861 atgacattgc tccatgcagc ttcaccagtc aacttagcta caaacaggct gtcatcatta
     1921 tcaacaaata gtttcagttc gtctctaatt tctttcgcac tgaatactga gttaacaaac
     1981 caaacagatt tattgattct ttcagcatta ggataatcct ttattctact tatcaattta
     2041 gggtaatcct tatggtcatt caagtcatac gaaatgatat agctattcat tgttattcac
     2101 ctccttaggt tgataacaac attatacacg aaaagaggac aacgaaatgc aggaacaaaa
     2161 caaaaaagtc atctattact actatgacga agaaggtaat agacgacttt ggagcgtaaa
     2221 caacttaaac gaatctgttg taagtggata caaagctaga attgaatttt tcaaaaagaa
     2281 aaatcctgat gtagataatc tattcattca aatagatggt gttgaattta aattactgta
     2341 aggaggatta acatgttttc tttaatcgta agcattttag caataattct atcaattatc
     2401 acaatagcaa ttaattcaaa tgataagtaa tcaaggaggg acaattatgg aaaagaaaaa
     2461 gatag
//
LOCUS       DANHPA010000188         2403 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.193, whole genome shotgun sequence.
ACCESSION   DANHPA010000188 DANHPA010000000
VERSION     DANHPA010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 2403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2403
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.193"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            353..466
                     /locus_tag="PTC28_002414"
                     /pseudo
     CDS             353..466
                     /locus_tag="PTC28_002414"
                     /inference="COORDINATES: protein motif:HMM:NF028245.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putative holin-like toxin"
     gene            798..2177
                     /locus_tag="PTC28_002415"
     CDS             798..2177
                     /locus_tag="PTC28_002415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
                     /protein_id="HDK5717641.1"
                     /translation="MKVSFKSKKSNLSDYWLERAQQAIQSETLEDAAKVAEIERIVAM
                     MIADIYKNLLAYYAKLATAEGIDWREAKQIADKFDVEAFQMRAKAYVENKDFSDKANK
                     ELKRYNTAMYVNREQLLKHELGLIVTKGYAEQENVINKHLHDSVTRTLKHQSGILGAD
                     VHVKQSDVEAIVYSNFGKLNWSERLWNNQDELRKDVERMASHVMLRGRHPYEFVPEIR
                     KKQKQTVANTKRLLITEAARVQTEAQKLHYLETIGKDAEYEFVAKRDEKTSKICRHYD
                     KKVFKVKDMVPGVNAPPMHPHCRSTTVPYVGNWRDKFFKDRQGKYRLRGDEETKQLLA
                     KKEMTDAIDSGKIKVELNVEKQNRHQLGHQLYEDYKKKNIQKGLPIPSYTILDNSELN
                     SLVLQKASKGHLTTDTNGNWDNKEIINFDKIIGKAYIDGKFIATRWGKVHYSKTGTHI
                     VPRLKEDKQ"
     gene            2174..2368
                     /locus_tag="PTC28_002416"
     CDS             2174..2368
                     /locus_tag="PTC28_002416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LSM domain protein"
                     /protein_id="HDK5717642.1"
                     /translation="MKLWTYVGKNVLIELKNGQQFVGKADDYDDEIANNRGEESIYLD
                     DGIQIYDIYKSQIKSIEVLD"
BASE COUNT          866 a          340 c          521 g          676 t
ORIGIN      
        1 acttagtcca gtgaacaata tggattaggt gcttttttat tggtagacag tggaattact
       61 aattgagtaa tagtttgtta ttggcttact gagcgcatta tcaatcgttt ttttcatttt
      121 tacataactg taaacaatca gtattcatac cagaagttat catgtgccaa cacaataatt
      181 gcttatggct tatcatgtag atgctgattt aaatttaaca taactaggcg aaatgttgtt
      241 gtcactataa aataaacagg tgagaaagtt agatagatgg tggctatctt agtataaagt
      301 gaggtgatgc ctatgagagc atcaacaaaa tctttagaaa ggagaggctt taatgattag
      361 tattgcagat gcactaatga ttatgctagg gtttggtaca tttactgtag ccctcataca
      421 tttagttgtc tcaatcgata aaaaatcaaa aaataaccat cactagcttt ggagaatgtg
      481 atggttattt aataatcaaa taataatcca ccgtcttttt aacggtctca ttaaggcaat
      541 acacttcatg tgtgttacct tttatattta taaattaaca tatcaatttc actttgtcta
      601 atacattaga ttcatctatt gaaaacagct ttctacaata tacataaaaa atagggcgct
      661 tagtccaaca acaataagga ataagtgatt ttttatatga gtaaccggat ggatgagtaa
      721 tggtttgtat taaagttact ggttcattaa aaggatttat gtaacgcttg caattgatac
      781 aactaataat cattgaaata aaagtatcgt ttaaatcaaa aaagtcaaac ttgagtgatt
      841 actggttaga gcgggcacaa caagcgatac aatctgagac gcttgaggat gcagctaaag
      901 tggctgaaat tgagcgtatc gttgcgatga tgattgcaga catatacaaa aacttattag
      961 cgtattatgc caaacttgcg acggctgaag ggattgattg gcgagaagca aagcaaatcg
     1021 cggataagtt tgatgttgaa gcgttccaaa tgcgagctaa ggcctatgta gagaataaag
     1081 attttagtga taaggcgaat aaagagctta aacgctacaa tacagcgatg tatgtaaacc
     1141 gtgagcagtt attaaagcat gagctcggtt tgattgtcac aaaaggctat gcagaacaag
     1201 agaacgtgat taacaaacat ctccatgata gtgtgacacg tacactgaaa catcagtcgg
     1261 ggatattagg tgcggatgtg catgtgaagc agtcagatgt tgaagcgatt gtgtactcta
     1321 actttggcaa gctgaattgg tctgagcgac tttggaacaa tcaagatgaa ctcagaaaag
     1381 atgttgagcg gatggcaagc catgtgatgt tgcggggacg tcatccatat gagtttgtgc
     1441 cagagatacg caagaaacag aagcagacag tcgctaatac gaaaaggtta ttgattaccg
     1501 aagctgcacg cgttcaaaca gaagcgcaga aattgcatta tttagagacg ataggaaaag
     1561 atgctgaata tgagtttgtg gccaaacgtg atgaaaagac gtctaaaatc tgtcgtcatt
     1621 atgataaaaa agtgtttaaa gtgaaagaca tggtgcctgg tgttaatgcc ccgccgatgc
     1681 atcctcattg tcgaagtacg acggtacctt atgtaggtaa ctggcgtgac aagttcttca
     1741 aagatagaca agggaagtat cgattaaggg gtgacgagga aacgaagcaa cttttagcta
     1801 aaaaggaaat gacggatgcc attgatagtg gtaaaataaa agttgaattg aacgttgaaa
     1861 agcagaatcg acaccaatta ggtcatcaat tgtatgaaga ttataagaaa aaaaatatac
     1921 aaaaagggct tccaataccg agttatacaa tattggacaa tagtgaattg aattcacttg
     1981 tactacaaaa agctagtaaa ggtcatttga caactgatac taatgggaat tgggataaca
     2041 aagaaattat taacttcgat aaaattatcg gtaaagcata cattgatggt aaatttatcg
     2101 caacgagatg gggaaaggtg cactactcaa aaaccggaac ccatattgta ccaagattga
     2161 aagaggataa acaatgaaac tatggacata tgtggggaaa aatgtattga tagaattgaa
     2221 gaatggtcaa caatttgttg gtaaagctga tgattatgac gatgaaatag ctaataatag
     2281 gggagaagaa tctatatatt tagatgacgg aatacaaata tacgacatat ataaaagtca
     2341 aattaaatcg attgaagttt tagattaagc accggatgaa gtggtaaatc attcatctcg
     2401 gtg
//
LOCUS       DANHPA010000189         2266 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.194, whole genome shotgun sequence.
ACCESSION   DANHPA010000189 DANHPA010000000
VERSION     DANHPA010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 2266)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2266)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2266
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.194"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            35..934
                     /gene="yut"
                     /locus_tag="PTC28_002417"
     CDS             35..934
                     /gene="yut"
                     /locus_tag="PTC28_002417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urea transporter"
                     /protein_id="HDK5717643.1"
                     /translation="MSKSIHTFFKNISQVVLLENTWTGLLILIALWIGNWKIGLAAMI
                     GSTISLMTARHFNYTDEEIHSGLAGFNPVLIAIDLTLFLLWSWQSILVILISIVLAMP
                     IAQAIKNFLKPFHLPELTTPFVVITWVVLLMSQQFKFVKTNVDVLPLTADVHINLNTT
                     FHPIHAFFNDVSQIFLVEHTISGILIVIACFIASRRAGIYLLIANFLGLLLEFFFGAD
                     IGTLNEGLFGFNLMLSIIAIGVTFRSANHLKAVIAFVLTVVMTPMMYAATATFLEPIG
                     IPSLTFPFIITTWTLLLAGQSTT"
     gene            complement(1104..2048)
                     /locus_tag="PTC28_002418"
     CDS             complement(1104..2048)
                     /locus_tag="PTC28_002418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HDK5717644.1"
                     /translation="MARRTYFHHVEHRKTQAHSKTTLWFSLIITLFFTVVEFVGGLVS
                     NSLALLSDSFHMLSDVIALGLSMVAVYFASRRPTARYTFGFLRFEILAAFLNGLALAV
                     ISVWIFYEAIMRIIFPQTVESGLMLVIATIGLIVNIILTIILMRSLKGENNINIQSAL
                     WHFIGDLLNSVGVIVAVGLIYLTGIQLIDPILSMVIALVILRGGYKIMRNAWLILMES
                     VPEHLETDEIMETMKSVDQVLDVHEFHLWSITTDHYSLSAHVVLDSRNSEDAYRTINR
                     LERLLKEKYGLAHTTLQIEHLDINHLNESYFEEVKHDE"
BASE COUNT          699 a          514 c          363 g          690 t
ORIGIN      
        1 tttgttttag taatagagaa agaagtgaac tttaatgtca aaatcgatac atactttttt
       61 caaaaacatt tctcaagtcg tcctactcga aaatacgtgg acaggtttac tcattttaat
      121 cgcactttgg attggcaact ggaaaatcgg acttgccgcg atgattggaa gtaccatcag
      181 cctcatgacc gcacgtcatt tcaattatac tgacgaagag attcattccg gactcgcagg
      241 cttcaatcct gtactgattg cgattgactt aactttattt ctactctggt cttggcaaag
      301 tatactcgtc attttaatca gtattgtatt agcgatgcct attgcacaag ccattaaaaa
      361 ctttctaaaa cctttccatc tacccgaact cactacacct tttgtcgtca tcacatgggt
      421 tgttctcttg atgtcacagc agttcaaatt tgttaaaacg aacgtcgatg tcttaccgtt
      481 aactgcagat gtgcatatca atttaaatac aacttttcat ccgatacacg ccttttttaa
      541 cgacgtgagt caaatctttt tagtcgaaca tacaatcagc ggtatactca ttgttatcgc
      601 ttgttttatt gcttcaagac gcgcgggcat ttatctttta attgccaact tcttaggttt
      661 attattggaa tttttctttg gcgcagatat tggcacattg aatgaaggtc tcttcggctt
      721 taacttgatg ctatctatca tcgcaattgg tgtaacattc cggtctgcca accatctcaa
      781 agcagtgata gcctttgttt taacggtagt catgacgcct atgatgtatg cagcaaccgc
      841 aacattttta gaaccgattg gcatcccatc actgacattt ccatttatta tcacaacatg
      901 gactttactt ttagccgggc aatcaacaac ctagccagat atttccaaat aaacaaaaca
      961 tcaataaagt gcacccatcg ccttaatacg cgcgatgcgt gcactttttt gagcatattc
     1021 aacttattct acgtttgctt gcgaaacctt tccctcttaa aagtaacaca caagtgatga
     1081 agtccagtgc gtgctatcta acatcattca tcatgcttca cttcttcaaa atacgactca
     1141 ttcaaatgat taatatccaa atgctcaatc tgtagtgttg tatgtgccaa cccatacttt
     1201 tctttcaaca accgttccaa tcgattaatc gtacggtacg cgtcttcact atttctgcta
     1261 tccaacacga catgcgcact aagcgaataa tgatccgtcg taattgacca taaatgaaac
     1321 tcatggacgt ccaacacttg gtctactgat ttcatcgtct ccataatctc atcagtctcc
     1381 aaatgttcag gtacggattc cattaaaatc aaccatgcat tgcgcataat tttataacca
     1441 ccgcgcaaaa tgactaaggc aatgaccata cttaaaattg ggtcaatcaa ctgaatcccc
     1501 gttaaataaa tcaaaccgac cgcgacgata acaccaacag aattcaataa gtccccaatg
     1561 aaatgccaca atgcactttg aatattaata ttattttcac ccttcaatga gcgcattaaa
     1621 atgatggtta aaataatatt cacaatcaaa ccaatcgttg caatgacaag cattaaacca
     1681 ctttcgacgg tttgcggaaa aatgatacgc ataatggctt cataaaaaat ccatacagaa
     1741 atcactgcga gtgctagccc atttaaaaac gctgcgagaa tttcaaacct taaaaatcca
     1801 aatgtataac gtgcggttgg tcggcggctc gcaaaataaa ccgcgaccat cgataaacct
     1861 aacgcaatga cgtcactcaa catatgaaat gaatctgata acagtgcaag tgagttagaa
     1921 acgagtcccc ctacaaactc tacaactgta aaaaagagtg taatgatgag tgaaaaccac
     1981 aatgtcgttt tcgagtgtgc ctgtgttttg cgatgctcaa catgatgaaa atatgttctt
     2041 ctagccataa aagtactcct ttgataatat ttctcagttc ttataaacga cgcgaggtga
     2101 atacgaccac tgccgcattc acttcatgag ttctacttgc tatatgttat gaaatcgtca
     2161 ttcactaaac tttcgtctac ttgatattgt cgatcagtta aacacgggcg gactgccaca
     2221 gccaaacctc catgttgatt ttcattttat cataccctat aactta
//
LOCUS       DANHPA010000190         2067 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.195, whole genome shotgun sequence.
ACCESSION   DANHPA010000190 DANHPA010000000
VERSION     DANHPA010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 2067)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2067)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2067
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.195"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            81..698
                     /locus_tag="PTC28_002419"
     CDS             81..698
                     /locus_tag="PTC28_002419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComK"
                     /protein_id="HDK5717645.1"
                     /translation="MDQKSNIMYAISKGDMFLRPVDGPDGALTSTEIYRYDGDHFIIH
                     DRAQRIIERSCRHYGESYSGRKAQAKRIANISNKTPILLTPIYQTYFFPTHSDRVPEN
                     SWLNMHYVVKLKPLKGARCKVTFANDLTVTLPISHHSVKHQFLNCVYFAYLVGRSNQV
                     QTHNPEKPIDYDQQPFNIFEALSQYALLENAKRELEEKKKKTTYL"
     gene            911..985
                     /locus_tag="PTC28_002420"
     tRNA            911..985
                     /locus_tag="PTC28_002420"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:943..945,aa:Asn,seq:gtt)
     gene            987..1075
                     /locus_tag="PTC28_002421"
     tRNA            987..1075
                     /locus_tag="PTC28_002421"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1022..1024,aa:Ser,seq:gct)
BASE COUNT          663 a          366 c          393 g          645 t
ORIGIN      
        1 cattgactta gttcagaata ttcatataat aagaattaga cagagagacc cgacacctta
       61 agagatagga gggttctatt atggaccaaa aatccaacat catgtatgca attagtaagg
      121 gagatatgtt tttgagacca gtagatggtc ctgatggtgc actcacgagt acggaaatct
      181 atagatatga tggtgatcat tttattattc acgatcgtgc ccaacgtatt attgagcgca
      241 gttgtagaca ttacggtgaa tcgtactcag gaagaaaagc acaagctaaa cgtatcgcca
      301 atatctctaa caagacaccc atattgctca ctccaattta tcaaacctac tttttcccca
      361 ctcactcgga tagggttcct gaaaatagtt ggctgaacat gcattacgta gtcaaactta
      421 aaccattaaa aggcgcccgt tgtaaagtca cttttgccaa tgatttaact gtcacactgc
      481 ctatttcgca tcatagtgtt aaacatcaat ttttgaattg tgtttatttt gcttatttag
      541 taggaaggtc taatcaagta caaacacata atcctgaaaa acctattgat tatgaccaac
      601 aaccttttaa tatttttgaa gcactatcgc aatatgcttt attagaaaat gcaaaaagag
      661 aattagaaga aaagaagaaa aaaacgactt acctgtagct atgttatttt gaattttgta
      721 ttgaataaat tatgattgta tgacttgcga gaaaacgcaa catgtttcat ctagactatt
      781 tattcaacaa agtgtaaagt tagcggaatt tatatacgca tagtgtaaat gttccgttaa
      841 cttttttgtt attaaccctt gatttctcca atgatgttga tataataata tttgtgattg
      901 aaaaagttat tccacagtag ctcagtggta gagctatcgg ctgttaaccg atcggtcgta
      961 ggttcgagtc ctacctgtgg agccatggaa acgtactcaa gttggctgaa gaggcgcccc
     1021 tgctaagggt gtaggtcgcg aaagcggcgc gagggttcga atccctccgt ttccgctagg
     1081 acgtcaaaaa agtttaaaat gcttttttga cgctttttta tttcttcgtc aaacccagtc
     1141 gtatcaaggg tttcaggaga ttataaaaat aagagacaaa ctttgtttaa ctacctttaa
     1201 cttagtttta aaaatttttc ggcacaatgt gactagataa tgactaaaaa attatcattt
     1261 tagtcacaag cattttatca attagtcaca tcgttttata ctcagataaa attacaaaat
     1321 tggacggtct agttcagtaa tgtcaatttc acttattgaa cccttgacaa atcgtaggaa
     1381 agggactggg acatgatgat ttcccagtct ctgcttctat ttatggattg atatccatta
     1441 atggtgatta aactgttgaa aaataagggt gtatgtaaaa aatgatgcga ttgttttctt
     1501 gatttcatca acttgcaagc agttgcgcag tatttgaaat atgattgccc agaaggctga
     1561 gacgcctgag ggataagtta aaggctaaac aacgtcattt aactttaaaa gtggctaccg
     1621 tttaacgcag tagctgtctg acttctcaat gcgcatgctt ttgagaagtc tagtcagcct
     1681 tgtgggggca gtacgacgaa atctttgtta cacatgagat tcctgtactg ctcccaaaat
     1741 ccaattcggc ttcaaacaag tgttgacttc aatcaagccg aattgagttg gagggtcagc
     1801 ccctaggaaa gggaagccat gatggcaatc aaaaaccgaa aatcgtaggg agggcaagtt
     1861 taacaaaata ttgcatcaat cgcttcaaaa gtttttatgt cccgccccct tttttatttt
     1921 atgcatgtca aaacaccacg atatcaagga cttgaaattg ttacggcaaa attcctaaaa
     1981 atttagtttg agtatagtta aatttatttt ttaggaattt aggtcacaag cgagtcacgc
     2041 gaccttttca tatttacaat atacatt
//
LOCUS       DANHPA010000191         2040 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.196, whole genome shotgun sequence.
ACCESSION   DANHPA010000191 DANHPA010000000
VERSION     DANHPA010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.196"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..507
                     /locus_tag="PTC28_002422"
     CDS             <1..507
                     /locus_tag="PTC28_002422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613257.1"
                     /note="phosphoenolpyruvate-dependent sugar
                     phosphotransferase system; catalyzes the phosphorylation
                     of incoming sugar substrates concomitant with their
                     translocation across the cell membrane; IIB is
                     phosphorylated by IIA and then transfers the phosphoryl
                     group to the sugar; IIC forms the translocation channel;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose transporter subunit IIBC"
                     /protein_id="HDK5717646.1"
                     /translation="YPFFKVYDNQILDDELKGIDSTNELHAKVGENFNTSKADAILNA
                     STNQSVADMTQEANSSNPITKPINVLVLCAGGGTSGLLANALNQAATEYEAPVKAAAD
                     SYGAHMDIMKDFDLVILAPQVASNYQDIKQDTDRLGIKLAKTQGGEYISLTRDGQAAL
                     KFVQDHFR"
     gene            525..1931
                     /gene="lacG"
                     /locus_tag="PTC28_002423"
     CDS             525..1931
                     /gene="lacG"
                     /locus_tag="PTC28_002423"
                     /EC_number="3.2.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-galactosidase"
                     /protein_id="HDK5717647.1"
                     /translation="MKKLPEDFIFGGATAAYQAEGATNIDGKGRVAWDTYLEKNYWYT
                     AEPASDFYHRYPVDLELSEKFGVNGIRISIAWSRIFPKGYGEVNPKGVDYYHRLFKEC
                     MKRNVEPFVTLHHFDTPEALHSNGDFLNRENIQHFVDYAEFCFNEFKEVNYWTTFNEI
                     GPIGDGQYLVGKFPPGIQYHFEKVFQSHHNMMVAHAKAVALFKEQGHQGEIGVVHALP
                     TKYPFNPDDPEDVRAAELEDIIHNKFILDATYLGHYSKETMDGVNHILSINGGALDLR
                     PEDFEILEVAKDLNDFLGINYYMSDWMRSFEGESEITHNSKGDKGGSKYQLKGIGQRE
                     FDVDVPRTDWDWMIYPQGLYDQIMRVKKDYPNYKKIYITENGLGYKDEFINDTVQDDA
                     RIDYVKQHLEVIADAIEDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFETQQRYP
                     KKSAYWYKKLAETRIIES"
BASE COUNT          698 a          310 c          417 g          615 t
ORIGIN      
        1 tatccattct tcaaagtcta tgataatcaa attttagatg atgagttgaa aggtattgac
       61 agtacgaacg aattacatgc aaaagtggga gaaaacttta atacgtcaaa agcagatgct
      121 attttaaatg cgtctacaaa tcaatccgtc gctgatatga ctcaagaagc aaacagttca
      181 aaccctatta ctaaacctat taatgtactt gtactatgtg ctggaggagg aacaagtggt
      241 ttactagcca acgctttaaa ccaagctgct acggagtacg aagcacctgt taaagctgct
      301 gcagatagtt atggcgcaca tatggatatt atgaaggatt tcgatctcgt cattttagcc
      361 ccacaagttg cttcaaacta tcaagatatt aaacaagata cagataggct cggaataaag
      421 cttgctaaga cacaaggtgg ggaatacatt agccttactc gtgatggcca agcagctttg
      481 aaatttgtgc aagatcattt tagataaaag gagatcaaaa tctaatgaaa aagttaccag
      541 aagactttat ttttggtggt gctacagcag catatcaagc tgaaggtgcg acaaatatag
      601 atggtaaagg tagagtagca tgggatactt atttagaaaa aaattattgg tacacagccg
      661 aaccagctag cgacttttat catcgctatc ctgttgactt agagttaagt gaaaaatttg
      721 gtgtgaatgg aatacgaata tcaatcgcat ggtcacgtat ttttcctaag ggctatggag
      781 aggttaatcc taaaggtgta gattattatc atcgtctttt taaagaatgc atgaaaagga
      841 acgttgaacc tttcgtaaca ttacatcatt ttgatacacc agaagcttta cattctaatg
      901 gtgacttctt aaacagagag aatattcaac attttgttga ttatgctgaa ttttgtttta
      961 acgagtttaa agaagtgaat tattggacaa cattcaatga aatcggacct attggggatg
     1021 gccagtatct tgtagggaaa ttcccacccg gtattcaata tcattttgaa aaagtgtttc
     1081 aatcacatca caatatgatg gttgcacatg caaaagcagt tgctttattc aaggaacaag
     1141 gtcatcaagg tgaaatcggt gttgttcatg ccttgcctac aaaatatcct tttaacccgg
     1201 acgatcctga agatgttcgc gcggctgaat tagaagatat tatccataat aagtttatat
     1261 tagacgcaac gtatttaggg cattactcta aagaaacgat ggatggcgtt aaccacattt
     1321 tgagtattaa cggtggggca ctggatttaa gaccagaaga ttttgaaata ctagaagttg
     1381 ccaaagactt aaatgatttc ttaggaatta actattatat gagtgattgg atgcgtagtt
     1441 ttgaaggtga aagtgaaatt acgcataatt ctaaaggtga caaaggcggt tcaaaatacc
     1501 aactgaaagg gattgggcaa cgtgaatttg atgtagatgt ccctagaaca gattgggatt
     1561 ggatgattta tcctcaaggt ttgtatgatc aaattatgcg tgtaaaaaaa gattatccta
     1621 attacaaaaa aatttatatt acagaaaatg gattaggtta taaagacgaa tttattaatg
     1681 atacagttca agacgatgca cgtattgatt atgtcaaaca acatttagaa gtgattgcag
     1741 atgcgattga ggatggagct aatgtaaaag gttatttcat ttggtcatta atggacgtgt
     1801 tctcatggtc caatggctat gaaaaacgtt atggtttatt ctatgttgac tttgaaacac
     1861 agcaacgcta tccgaaaaag agtgcatatt ggtataagaa actcgcagaa acacgaatca
     1921 ttgaatcata gtatgaaaaa ccgagacttt taaacgggtc ttggtttttt gatgcatttt
     1981 accattatca aagtaatcat tctgaacgtc tataatcgtt aaaccttgtt ttaacattag
//
LOCUS       DANHPA010000192         2026 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.197, whole genome shotgun sequence.
ACCESSION   DANHPA010000192 DANHPA010000000
VERSION     DANHPA010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 2026)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2026)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2026
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.197"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            75..251
                     /locus_tag="PTC28_002424"
     CDS             75..251
                     /locus_tag="PTC28_002424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717648.1"
                     /translation="MYIIVIILAVLTVIAWITAIRAFRQTGQKGKINPNTWVIIGAVL
                     TTLTIMMMFIFSQN"
     gene            514..1338
                     /locus_tag="PTC28_002425"
     CDS             514..1338
                     /locus_tag="PTC28_002425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717649.1"
                     /translation="MLVAEGHDVFIQTPPTMRQTTVAQTREIDLFDLSNVVSALEDIA
                     LVVVIGNPLFSNTRLTQSQPIQLQRLMYDNLGYAMKQANIQQCIVWQSQLQPVLKQMM
                     EAFQIEVIHHALKTTKWFPNRRVLYQWSEERQTVRSIQALDIPQSVSMEAVTAMYGRF
                     LKTLNGRLVNGIYDGQQFTIVLMPFKIPLIQMRHHSSSDLTQRVILNITGGWLAQQSG
                     HTARMEFRRLEGDTTTCLIALHDFVPRLPWGVYRLTQAPMHRFVSYLFRQYWHQFK"
     gene            complement(1558..2007)
                     /locus_tag="PTC28_002426"
     CDS             complement(1558..2007)
                     /locus_tag="PTC28_002426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019164946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDK5717650.1"
                     /translation="MTKHPKALHDELCFLFYVASKEVIKKYTACLKEYELTYTGYITL
                     ISIGDDEVVNIKRLGDRIYLNSGTLTPLTKKLVAQGLIKKVRKPEDERNLNISLTDKG
                     RKLKQQLAHLNEEVHASLSMEGTDMTELVGILQRFLENNFPSHPVTV"
BASE COUNT          611 a          344 c          437 g          634 t
ORIGIN      
        1 cactttatat ttttctgtaa tcatttttat gataatatga agttattcat gattgaacac
       61 gggaggagct agcggtgtat attatagtaa ttattttggc agtgctgacc gtcattgctt
      121 ggattacggc aattcgtgca tttcgtcaga cgggacaaaa gggcaaaatc aatcccaata
      181 catgggttat catcggtgca gtgttgacaa cattgacgat catgatgatg tttattttca
      241 gtcaaaatta aacatgtatc gtatacatgt tgataataga aatgaaagac aaaagtgaga
      301 aattgcatgg gcagttttta aacttttgtc ttttttgatg tagtagcggg catgaatcat
      361 ttgttaaatt ttggtgagaa tctactataa ttcagtgtat gaaagtggag aagtggtata
      421 atactaaaaa atgaaacaga tgagagagtg aaagacatag tgaatatttt agtgattact
      481 gatggtcacc cctataccca taattatgta gccatgttgg ttgctgaagg acatgacgtt
      541 tttatccaaa caccgccgac gatgagacaa acgactgttg cacaaacacg agagattgac
      601 ttgtttgatt tgtcgaatgt tgtctctgca ttagaagata ttgcacttgt tgtcgtgatt
      661 ggaaacccac tattttcaaa tacgaggctc acgcaaagtc agccaataca attgcaacga
      721 ttaatgtatg acaatttagg ttatgcgatg aagcaggcga atattcagca atgtatcgtt
      781 tggcaatcgc aattgcagcc tgtgcttaaa caaatgatgg aggcttttca aattgaagtg
      841 attcatcatg ctttgaaaac aacgaaatgg tttccgaatc gccgcgtcct ttatcaatgg
      901 agtgaggagc gacaaacagt acgttcgatt caggcgttag atattccaca aagtgtatca
      961 atggaagcgg tcactgccat gtacggtcga tttttaaaaa cgttgaatgg gcgacttgtg
     1021 aatggtattt atgatggaca acagtttaca attgtgctca tgccatttaa aataccactt
     1081 atccaaatgc gtcatcattc gagcagtgac ttaacacagc gcgtgatttt gaatattaca
     1141 ggaggatggc ttgcacaaca aagtggacat acagcacgta tggagtttcg acgtttagag
     1201 ggtgatacaa cgacatgctt aattgcattg catgactttg ttccgcgatt accttggggt
     1261 gtgtatcgct tgacacaagc accaatgcat cgatttgtct cttatttatt ccgtcaatat
     1321 tggcatcaat ttaagtaaag ggaaggaata acggggcgtg ttaggctata acgacatcgg
     1381 gggagtagaa atgtgatggt catgattcta ctccagcggt ccgattgtaa atgaagatgg
     1441 cgctattatg aataatagcg ctaaaaggaa taactgcaat gatactgggg aggtagcgat
     1501 atttatatct gtagcacatt gccccgtcgt taacactatg gttatacagc tgtaaaatta
     1561 aactgttaca gggtgcgaag gaaagttgtt ttcaagaaat cgttgtaaga ttccgactaa
     1621 ttctgtcata tccgtccctt ccattgataa tgacgcatgt acctcttcat ttaaatgtgc
     1681 gagttgttgc ttcagtttgc gtcctttatc agtaagtgaa atgttcaagt tacgttcatc
     1741 ttcaggcttt cgtacttttt tgatcaagcc ctgagccact aattttttag tcagtggtgt
     1801 caaagtgccg gaatttaaat atatgcgatc accgagtcgt ttgatattga caacctcatc
     1861 atccccaatt gaaatgagtg taatataacc tgtgtaagtg agttcatatt cttttaaaca
     1921 agcagtatat tttttgataa cttccttcga tgcaacataa aataaaaaac ataattcgtc
     1981 atgcagcgct ttcggatgtt ttgtcatgtt gtagaccccc aatact
//
LOCUS       DANHPA010000193         1991 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.198, whole genome shotgun sequence.
ACCESSION   DANHPA010000193 DANHPA010000000
VERSION     DANHPA010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1991)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1991)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1991
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.198"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            176..1057
                     /locus_tag="PTC28_002427"
     CDS             176..1057
                     /locus_tag="PTC28_002427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDK5717651.1"
                     /translation="MKLKGFALVIVMVVFMLAGCHFNANQSKETGKSSDKGPERIISL
                     MPSNTEILYELGLGDKVVGVSTVDDYPKGVKEKQQFDAMQLNKEALIKAQPDLILAHE
                     SQKASQGKVLDSLEESGIRVAYVKDAHSINEMYETFNQIGKLTGTEQQAEQLVKETKH
                     NIQQVIDTIPKHKKAPHVFIEIASQPEMYTAGKGTFMNDMLKQLHARNVFDDTEGWPK
                     VSKEQIIKKNPDVMIATSGVSTKDYRNDVQQRGGFERVNAVKEDRVVALNDDMLSRPG
                     PRLDDAMKMLRDAVYEK"
     gene            1047..>1991
                     /locus_tag="PTC28_002428"
     CDS             1047..>1991
                     /locus_tag="PTC28_002428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDK5717652.1"
                     /translation="MKNNVTKGFMSISAWSLLLMVVCTYSLFSRLEWHTPLTSTLVME
                     VRLPRMLLALFAGMGLTIAGQMFQIILNNPLADSFTLGLANGATVGAAIAVLLGLPFV
                     WVAPLAMVLGMLSLVVVMTIAYTISRGYPTRSLILAGILIGSLLNAVLFLLVQFNPQR
                     LQNIVAYMFGGFGAAEYREAAVVMSVFVIITLIFFMLVPKVKLLQMNTLSSAALGLHV
                     ERLSVTVLILATMMSTVIIGFVGVIGFIGMVIPQFVHRLSRGTLPFKMLLNILIGGTA
                     MVLADVLGAQLLDPIQLPASVVLAILGIPLMFYLMIVER"
BASE COUNT          582 a          352 c          471 g          586 t
ORIGIN      
        1 gtggtatttg attgccttct tggctctttg tttaagttcc ccatcatgat gcagtcgatg
       61 aaagtgtcta tttaggtagt tttcaaaaat ttacataaaa aattaattta aggcgccaaa
      121 aatcaacaaa aaatgataag ataaacaaaa taagatgaaa aatgggagtg gaaggatgaa
      181 attaaaaggg ttcgcacttg tgatcgtcat ggttgtcttc atgctcgcgg gttgtcactt
      241 caatgcaaat cagtcgaagg agacgggcaa atcttctgat aaaggtccgg aacgtatcat
      301 ttcattaatg ccaagtaata cagagatttt atatgagctc ggactaggtg ataaggtcgt
      361 aggtgtttct acggtagatg attatccaaa aggcgtgaaa gagaagcagc aatttgacgc
      421 aatgcaactt aataaggaag cgttgattaa agcgcaaccg gatttgattt tagcgcatga
      481 atcacaaaaa gcatctcaag gtaaagtgtt ggatagttta gaagaaagtg gcattcgtgt
      541 tgcttatgtc aaagatgcgc attcgattaa tgaaatgtat gaaacgttta atcaaatcgg
      601 aaagctcaca ggaactgaac aacaagcaga acaattagtg aaagaaacga aacataacat
      661 tcaacaggtg atcgatacga ttccgaagca caaaaaagca cctcacgtgt tcattgaaat
      721 tgcatctcaa ccagaaatgt atacagcggg taaagggact tttatgaatg atatgttaaa
      781 gcaactccat gctcgaaatg tgtttgatga tacggaaggt tggccgaaag tgtctaaaga
      841 acaaattatc aagaaaaatc cagatgtgat gattgcgacg tcaggtgttt cgacaaagga
      901 ttatcgcaat gatgtacagc aacgtggtgg tttcgagaga gttaatgcag tgaaagaaga
      961 ccgtgttgtc gctttaaatg atgacatgtt atcacgacct ggaccgcgtt tagatgatgc
     1021 gatgaaaatg ttgagagatg ctgtgtatga aaaataacgt aacgaagggc ttcatgagca
     1081 tcagtgcatg gagccttctt ttaatggttg tctgtacata cagtttattc agtcgattag
     1141 agtggcacac ccctttaaca tcgacattgg ttatggaggt acgtctacct agaatgctac
     1201 tcgcattgtt tgcaggcatg gggctcacaa tagcaggaca aatgtttcaa attatcttga
     1261 acaaccccct tgccgatagt tttacacttg gactggcaaa cggtgcgaca gtgggggcgg
     1321 caatcgctgt acttctcggc ttaccttttg tatgggttgc gcctttagcg atggtgttgg
     1381 gcatgctctc attagtcgtt gttatgacta tcgcttatac catttcgagg ggctatccga
     1441 cgcgctcgct cattctagcc gggatactca tcggttcgtt gttgaatgca gtgctgtttt
     1501 tactcgtcca attcaatccg caaagactcc aaaatattgt ggcgtacatg ttcggtggct
     1561 ttggtgctgc ggaatatcga gaagcggccg tggtgatgag cgtctttgtc attattacat
     1621 tgatcttctt catgttagtt ccgaaagtta aattactaca aatgaacacg ctctcgagtg
     1681 ctgcgttagg gcttcatgtc gagcgtttat cggtgactgt attaatatta gcgaccatga
     1741 tgtctacagt cattatcggc tttgtagggg tgattggctt tatcggtatg gtcattccac
     1801 aatttgtaca tcgtttgagc cgagggacat taccttttaa aatgctttta aatattttaa
     1861 ttggtgggac agctatggta ctggcagatg ttttaggtgc acaattactc gacccgattc
     1921 aactgcccgc aagtgtcgtc ttagcaattt taggcattcc actgatgttt tatctcatga
     1981 tagttgaacg a
//
LOCUS       DANHPA010000194         1988 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.199, whole genome shotgun sequence.
ACCESSION   DANHPA010000194 DANHPA010000000
VERSION     DANHPA010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1988
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.199"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..1966
                     /locus_tag="PTC28_002429"
     CDS             <1..1966
                     /locus_tag="PTC28_002429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDK5717653.1"
                     /translation="KVKVLQFGVNPHYHNPIGTRTEEAIKHKDGVIFAGSWTKKYPQR
                     NKDLARIFDGLSLSGNDLTIFDRNLHLERERYLFPSKYIPYITGPLSHDELMKVHKIF
                     RWALNVNSVKYSETMFANRVFELQAFGNLIISNYSVGVNNQFPNIFMVNDKSDVGPIL
                     NRHSDSELREFQAKNIRNVMLENTTYHRIDEIANFIGLASASIQHVIGVVVKERTEAL
                     IEMFKRQMNVKKILLTEQELNDRIHELDFITFFDENYIYEEYYLADLISAFYYTDVDF
                     VQKVLTTDYQVHDYTDTYHDKHLTLFDAQAYQSGDYQIGYTLDDAELFYNEKQILSKN
                     DLVSVIVPIHNNGRYLEDKCMRSLRRSSLFNRFEIIFVDDGSTDEETRHVIQRLRRKY
                     PNIVYYRFESGSGSASRPRNKGVELASTPYITYLDPDNEAIGDGYAQLYEKLKEDSSL
                     DMVIGNIIKEDNRKRSVFNYHGTIKKYNNDNALITNTKKFLKNAGLRAQSIQALMVKA
                     NVIKNNNIKMVEGAAGQDTVFFQELMLYSKKVLGIKVPIHMYYAAVSGSVTNSISKKL
                     FDKYYKLELERIPFLEQHHLMDAYMEQRFNLYVKGWYKPRLDIVKSEEREEAVKRFLD
                     IYHLYEKYERPHDVELDDYIKTLKKEVKHL"
BASE COUNT          717 a          277 c          386 g          608 t
ORIGIN      
        1 aaaagttaaa gttttacaat ttggtgtaaa cccacattat cataatccaa ttggaacaag
       61 aactgaagaa gcgataaaac ataaagatgg agtgatattc gctggtagtt ggacaaaaaa
      121 atatcctcaa agaaataaag acttagcacg tatttttgat ggattgagtt taagtggtaa
      181 cgatttaaca atctttgatc gaaatttaca tcttgaaagg gaaagatact tatttcctag
      241 taaatacatt ccatatatta ccggtccatt gagtcatgat gaactaatga aagtacataa
      301 gatttttaga tgggcactga acgtcaattc tgtgaagtat tccgagacga tgtttgcgaa
      361 tcgtgtcttt gaattacaag cattcggaaa tttgattatt tctaattatt cagtaggtgt
      421 gaacaatcaa tttcctaata tatttatggt gaatgataaa tctgatgtag gacctatttt
      481 aaaccgacat tcggacagtg aattaaggga gtttcaagca aagaatattc gcaatgtgat
      541 gttggaaaat acgacatatc accgaattga cgaaattgct aacttcatcg gtttagcaag
      601 cgcttctata caacacgtaa tcggtgttgt agtgaaagaa aggacagaag ctttaattga
      661 aatgtttaag cgtcaaatga atgtgaagaa aatattgctg accgaacaag aactgaatga
      721 tcgtatacat gagttggatt ttattacatt ttttgatgag aactacattt atgaagaata
      781 ttacttagct gatttaatca gtgcgtttta ttacacagat gtcgattttg ttcaaaaggt
      841 gttaaccacc gactatcaag tgcatgacta taccgatacg tatcatgaca aacatttaac
      901 tttatttgat gctcaagctt atcaatcagg ggactatcaa atcggttata cattagatga
      961 tgccgaatta ttttacaatg aaaagcaaat tttaagtaaa aatgatttag tcagtgtaat
     1021 cgtaccaatt cataataatg ggcgctactt agaagataag tgtatgcgta gtttgagacg
     1081 atcttctttg ttcaacagat ttgaaattat ttttgtcgat gatggttcaa ctgacgaaga
     1141 aacgcgtcat gttattcaaa gattaagacg aaaatatcct aatatcgttt attatcgatt
     1201 tgaatctggc tcaggtagtg cttcgagacc aagaaataaa ggtgtggaac tcgcctctac
     1261 accatacatt acgtatttag atcctgataa tgaagcgata ggtgatggat acgcacaact
     1321 gtatgaaaaa ttaaaagaag attcatctct tgatatggtc ataggtaata ttattaaaga
     1381 ggacaatcgt aaaagatccg tctttaatta tcacggtacg ataaaaaagt ataataacga
     1441 caatgcatta atcacaaata caaaaaagtt tttgaaaaat gcagggttac gggctcaaag
     1501 tattcaggcc ttaatggtca aagcgaatgt catcaaaaat aataacatta aaatggttga
     1561 aggtgcagca gggcaagaca ccgtattctt tcaagagttg atgttatatt ctaaaaaagt
     1621 attgggcatc aaagttccta tacacatgta ttatgctgcg gtaagtgggt cggttacgaa
     1681 ttcaatctca aaaaaattgt ttgataagta ttacaaacta gagcttgaac gtattccttt
     1741 tttagaacaa catcatctca tggatgcgta tatggaacag cgctttaatt tgtatgtgaa
     1801 gggctggtat aaaccaagac tagatatagt gaaaagtgag gaacgagaag aagctgtaaa
     1861 acgtttttta gatatttatc atctgtatga aaagtatgag agaccgcacg atgttgaatt
     1921 agatgattat attaaaacgt taaaaaaaga agtgaaacat ctataagggg gttagatgat
     1981 gcacaatc
//
LOCUS       DANHPA010000195         1947 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.200, whole genome shotgun sequence.
ACCESSION   DANHPA010000195 DANHPA010000000
VERSION     DANHPA010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1947)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1947)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1947
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.200"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            50..262
                     /locus_tag="PTC28_002430"
     CDS             50..262
                     /locus_tag="PTC28_002430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2975 domain-containing protein"
                     /protein_id="HDK5717654.1"
                     /translation="MIVVIAMLLFMYGVMPNFYHLLNVEVKYKEVLNSLDMGSLLIIV
                     IGFVILALATIYEKSQKIKEENDLTI"
     gene            272..484
                     /locus_tag="PTC28_002431"
     CDS             272..484
                     /locus_tag="PTC28_002431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016911130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDK5717655.1"
                     /translation="MIKIKLDEVLKERNVSLTELSNAVNVTIANLSILKTGKAKAVRF
                     STLEAICNYLDCQPGDIIVNQKDDVG"
     gene            720..1764
                     /locus_tag="PTC28_002432"
                     /pseudo
     CDS             720..1764
                     /locus_tag="PTC28_002432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_075773664.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="B domain-containing protein"
BASE COUNT          754 a          256 c          342 g          595 t
ORIGIN      
        1 tctaggcaat atatatggac attttaatta ttcagaaggt aatcatacat tgattgttgt
       61 gattgcgatg ttactgttta tgtatggtgt gatgcctaat ttctatcact tacttaatgt
      121 tgaggtaaaa tacaaggaag tcttaaatag tttggatatg gggagtttgc ttattatagt
      181 cataggtttt gtaattttag ctttagccac aatatatgaa aagtctcaaa agataaaaga
      241 agaaaatgat ctcacgatat agggagatgc tatgattaaa ataaaattag atgaagtatt
      301 gaaagagaga aatgtttcgc ttactgaatt atcaaatgcc gttaatgtaa cgattgcaaa
      361 tttatccatt ttaaaaacag gaaaggctaa ggctgtacga tttagtactt tagaagcgat
      421 atgtaattat cttgattgcc aacctgggga catcatagtt aatcaaaaag atgatgttgg
      481 ataatacgac caaaatttca tgaaattcgt aaattagaaa atgtttttgc atcataaata
      541 caggaggact agggtaatgt tcctagtcct tttcttatgg gtcaatcatt gcggtgtgca
      601 tttaaataaa tatttaaatc tatatcgtgt tttgtccttt actttctata ctttatatta
      661 tattatatta ttagcttaaa tgttacataa catattttat ttgaagggtg ttggacttaa
      721 tggaaaacaa aaactttttt agtattcgta aactatctat tggtgtaggt tcttgcttaa
      781 tcgcgagttc tttacttgta aacacgccaa gttttgctga agaaacagat aatgcgaaca
      841 ttaatgacgc acaacaaaac gccttttatg aaattttaca tttgccaaac ttaactgaag
      901 agcaacaaaa tggattcatc caaagtctta aagatgatcc aagtgtgagc aacgatattt
      961 tagtagaagc taagaaatta aatgacactc aagctaaacc tgattacagt gaagcacaac
     1021 aaaatgcatt ttatgaaatt ttacatttgt caaacttaac tgaagagcaa caaaatgggt
     1081 tcatccaaag ccttaaagat gatccaagtg taagtaaaga aattttagca gaagctaaga
     1141 agttaaatga cactcaagct aaacctgatt acagtgaagc acaacaaaat gcattttatg
     1201 aaattttaca tttgtcaaac ttaactgaag agcaacaaaa tgggttcatc caaagcctta
     1261 aagatgatcc aagtgtaagt aaagaaattt tagcagaagc taagaagtta aatgatagtc
     1321 aagcacctaa agttgataaa gctaaaaaaa ctgacaaagc tgaagcgaaa gcagatgata
     1381 aagctaaagg tgaagaagcc aaaaaatctg aagacaaaaa aagatagcaa agcagataag
     1441 gcaaaatcga aaaacgctac acatgttgtt aaacctggtg aaactttaga taatattgct
     1501 aaagatcatc atacaactgt tgataaaatt gctaaagata acaaaataaa agataaaaat
     1561 gtgattaaac taggtcaaaa acttgttgtt gataaacaaa aagcaactca aggaaaacaa
     1621 gaagctgtag cgaaaaatga agtgaaggct ttacctaata ctggtgaaaa tgatgatatc
     1681 gcattattca gcacaacagt tgcgggtggc gtaagtatcg ctttaggttc attattatta
     1741 ggaagaaaca gaaaaactag ctaagactaa aattttctat actataaaaa attaactgtg
     1801 atagtagtgt tcaagtgcta cgtcacagtt ttttattttg ccattaagta gaaagcgcat
     1861 ctaaatataa gaatatttta gaagttagtg ctataaatta aaaagttttt acattgattt
     1921 tacctcttca tattgaaaag tggtatt
//
LOCUS       DANHPA010000196         1895 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.201, whole genome shotgun sequence.
ACCESSION   DANHPA010000196 DANHPA010000000
VERSION     DANHPA010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1895)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1895)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1895
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.201"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(129..470)
                     /locus_tag="PTC28_002433"
     CDS             complement(129..470)
                     /locus_tag="PTC28_002433"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717656.1"
                     /translation="MKKIVLSFSIILLSIILTGCVDKEIKELNGEWESYDGNKLKLII
                     KNDSMNIIEYDDYSTKEEAEKRPHKAKIVKEDGKLYGIDSEGDKAVYTMLVIRLFQMV
                     FFSKELNSLVN"
     gene            complement(1651..1830)
                     /locus_tag="PTC28_002434"
     CDS             complement(1651..1830)
                     /locus_tag="PTC28_002434"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717657.1"
                     /translation="MANVAIKLEINNQMSEQEKLMFKSDNIADVITMIRSKSGNTIIL
                     KTEDNFKVEYYGKEN"
BASE COUNT          642 a          331 c          254 g          668 t
ORIGIN      
        1 acaggtatat acaggttaaa agtaattgaa acatatggaa attgggagtt agctttataa
       61 ttatataaac ttaactccct tttctttttt gcccatttac gtgttttgtg agtagaggat
      121 agactggttt aatttactaa gctatttaac tctttcgaaa aaaataccat ctgaaacaag
      181 cgaatcacca acatggtata aacagcctta tctccctctg aatcaatccc gtatagtttc
      241 ccatcttctt ttactatttt ggctttatga ggtctttttt ctgcctcctc tttggttgaa
      301 taatcgtcat attcaataat attcatgctg tcatttttaa ttataagttt taacttatta
      361 ccatcataac tttcccattc accattcaac tccttaattt ctttatcaac acaaccagtt
      421 aaaataatag ataataaaat gatactaaat gataaaacaa ttttcttcat aattcatagc
      481 cttctattta ttattcataa ctaaattgta caacacttat acgaacaaca taagatacaa
      541 tatttaagaa gaataatata ccgcttcatt tcatagctta tttaagctgt ataagcacgt
      601 cagaaagcat ctatttaata tgtgactaaa aagctatatc gcttatatca gcgtatacga
      661 caacagaata aagcatagag aagcggtaag ttaataaggt acagattcag aagatatgaa
      721 gcaattgaat tggtctgaat gatatacata cctgcaatat taggacacaa agatagaact
      781 aaaattaatg ggctatcagc gtgtatttac gtgatatgag cgtgttaatt aattagactt
      841 ataaactaat aaacatcgta tatgaggctg tgtggaagca tacagaagcg gtgatataat
      901 gacaaatgat atatgacagt ttcatactgt atgataggca tacgtgcctt aatgcaataa
      961 catatatatc aattgtattt aattaataac acaacaacag atatgtgata tgagagacac
     1021 acagacaagc tacaagccac acaaaccgct tcaagcgcct tgctacacgt ccatatagcc
     1081 atgtataagc gtgttaatgc ttaagggtat taaaccattc agaaccgttt tattacttta
     1141 tatttgcgta tatcactttg tacagcttta attttgcacc ttttaattgt tagtaaataa
     1201 aatcgcaatt ttatccgaaa actagggcga taaaatccct tgtatatccc atgtttatat
     1261 ttttcaacat tttgccgttt tgtccatcat tgtgcagatt gctgttttta gagtgtaaaa
     1321 aggtaaaata acaagtttta acacttgtgc gcttactaca tgttatacaa atcgcttcaa
     1381 gttgctaaaa atacgattaa aatgacacac taatatactt taacgctttc atctactaaa
     1441 ttggtgcgct cctttattca ctaaattttc agtcatttta gtacttaaaa agtatcatct
     1501 ttttgcatac agtaaataaa cggggggtag tattggatta ctaaatgtac gatgttcaat
     1561 ttttgcttat aactgatgca caatcacccc attataaaaa acactgacag tcatttgacc
     1621 gccagtgcat ttgtttactg ttattaaact ttaattttct tttccataat actcaacctt
     1681 aaaattatcc tcagtcttca aaataattgt attacctgat ttactcctaa tcatagttat
     1741 cacatcagca atgttgtctg acttgaacat taacttttcc tgctcactca tttggttgtt
     1801 gatttctaat tttattgcta catttgccat tgaaatattc ctcccactat atacgaacct
     1861 ttgttctttt aatacaaaca tttgttctat ataaa
//
LOCUS       DANHPA010000197         1865 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.202, whole genome shotgun sequence.
ACCESSION   DANHPA010000197 DANHPA010000000
VERSION     DANHPA010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1865)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1865)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1865
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.202"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..252)
                     /locus_tag="PTC28_002435"
     CDS             complement(<1..252)
                     /locus_tag="PTC28_002435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Arm DNA-binding domain-containing protein"
                     /protein_id="HDK5717658.1"
                     /translation="MPVYKDDKTGKWYFSVRYKDVFGNNKRKMKRGFKTKRQAKVAEA
                     DFIQKTKNGYSDKQIYEVVFYEQLKNTDLRERTIRRKKYD"
     gene            368..565
                     /locus_tag="PTC28_002436"
     CDS             368..565
                     /locus_tag="PTC28_002436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002452298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717659.1"
                     /translation="MSPKVKARKKPVVVDAEKAKKTTFIDTLEGRMKAEKGDWIITGV
                     NGEQYPVKPDIFEKTYEVLPD"
     gene            complement(562..969)
                     /locus_tag="PTC28_002437"
     CDS             complement(562..969)
                     /locus_tag="PTC28_002437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015977903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIR domain-containing protein"
                     /protein_id="HDK5717660.1"
                     /translation="MLGKLFVSYRADDEGSRYKNLLVGWSENPNKNFFDIKFEDTSIG
                     ISINSTDAYYIKRRIKEKIKDSNKVICIIGKNTFGSEWVNWELATAYDLNKPIVAIKI
                     DRSYKSPIEIYGKNVHWAYSFTYEAIKKALLEV"
     gene            complement(963..1400)
                     /locus_tag="PTC28_002438"
     CDS             complement(963..1400)
                     /locus_tag="PTC28_002438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015977901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4231 domain-containing protein"
                     /protein_id="HDK5717661.1"
                     /translation="MESYLRDRLEDQINWYDSKSMSCQKNYNLNKYIQIIAGALIPAI
                     TPFSLVFNTLTFTIATSILGLLIVISQSISSIKKFHENYIQYRTTCEVLKHEKYLYLY
                     NVEPYDNEKEPIKLLVSRVESIISNENINWQTMRQDIKEEERC"
     gene            complement(1448..1711)
                     /locus_tag="PTC28_002439"
     CDS             complement(1448..1711)
                     /locus_tag="PTC28_002439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002489384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717662.1"
                     /translation="MTKFFATQGIYNPSNTTIEVFQKQQILANFDKFYHAFGQLTFNM
                     EKQATYNYYMTHQKQNFIQIAQNDKIIKQNEEIIELLKVIANK"
BASE COUNT          575 a          303 c          252 g          735 t
ORIGIN      
        1 atcatatttt tttctgcgta tagtcctttc tcttaaatcg gtatttttta attgttcata
       61 aaacacaact tcgtaaattt gtttatctga ataaccgttt ttagtttttt gaataaaatc
      121 tgcttctgca actttagctt gacgttttgt tttaaatcca cgcttcattt tgcgtttatt
      181 atttccaaac acatctttat accttactga aaaataccat ttacctgttt tgtcgtcttt
      241 gtacaccggc atttcgtcat tcctcctcaa aaaaagtaaa aaaataataa gggtacgtgg
      301 gaggtacccg tgtaatatta aatagtcatt tttcatgtta taataaatta aaaagtaggt
      361 gaaacgaatg tctcctaaag taaaagccag aaaaaaacct gttgtagtcg atgcagaaaa
      421 agctaaaaaa acaactttta ttgatacttt agaaggtcgt atgaaagctg aaaaaggaga
      481 ctggattatc accggagtaa acggtgaaca atatccagtc aaacctgata ttttcgaaaa
      541 aacttatgaa gtgcttcccg attaaacttc gagaagtgct tttttaatag cttcatatgt
      601 aaaagaatat gcccaatgta cattctttcc ataaatttct ataggtgact tataacttct
      661 atcaattttt attgcaacaa taggcttgtt taagtcataa gctgttgcta attcccaatt
      721 tacccattcg gatccaaaag tgtttttccc aataatacat ataaccttat tagaatcttt
      781 gattttctct ttgattcttc tttttatata ataagcatct gtagaattta tgcttattcc
      841 aatactagta tcttcaaact ttatatcgaa gaaattcttg tttggatttt cagaccaccc
      901 tactaataaa tttttgtatc ttgaaccttc atcatccgcc ctataactta caaataattt
      961 tcctaacatc tttcttcctc cttaatatcc tgtctcatcg tttgccaatt gatattctca
     1021 ttagaaataa tcgattcaac acgtgagact aaaagtttta tcggttcttt ctcgttatca
     1081 taaggttcaa cattatataa gtataagtat ttttcatgtt ttaaaacttc acatgtagtc
     1141 ctatattgaa tataattttc atggaatttc tttatactac tgattgattg agatatcaca
     1201 atgagcaaac ctaatattga tgtagcgata gtaaaagtta aagtattaaa tactagcgaa
     1261 aaaggggtta ttgctggtat taatgcacct gcaataattt gtatatattt atttaaattg
     1321 taattttttt ggcaagacat gcttttgcta tcataccaat tgatttgatc ttctaaccta
     1381 tcacgaagat aactctccat ccctcaacct ccaatttaat agggtaggcg tgctagccct
     1441 ttaaaaatca tttgttcgct ataactttta acaattcaat gatttcttcg ttctgtttta
     1501 taattttgtc attttgagct atttgtataa aattttgttt ttgatgggtc atataataat
     1561 tatatgtagc ttgtttttcc atattaaatg tcagttgacc aaaagcatgg taaaatttat
     1621 caaagtttgc taatatctgc tgcttttgaa agacttctat tgtagtgttt gaaggattgt
     1681 aaataccttg agtagcaaag aatttagtta ttttctcttt ttgagattct ttgctctctt
     1741 taattttaag ttgcttggtt tttacttgtt cttctttaag tcttttttct tcttttaaaa
     1801 gatcaattgg attgtcgttt agccattccc aaacaacatt atctttttgt tcacgtgtta
     1861 aagat
//
LOCUS       DANHPA010000198         1851 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.203, whole genome shotgun sequence.
ACCESSION   DANHPA010000198 DANHPA010000000
VERSION     DANHPA010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.203"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..1579
                     /locus_tag="PTC28_002440"
     CDS             <1..1579
                     /locus_tag="PTC28_002440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HDK5717663.1"
                     /translation="NKERILLIAYLEKYVLNREDLYFDEVQIENFIKFTEKWYFPLQP
                     FQKFIIPFIFLFEKEGDFLYYEQFFITLGRGGGKNGLITALSNYFISYLHGVPNYDIS
                     VVANSEDQAKTSFEEAYNMIEKNKLEDVFHKTKSVITDTETKSRFRFRTSNAGTKDGG
                     REGCVIYDEVHRFEDSETVDVFSSGLGKVKWPREFFIGTDGYVRDGFLDKLKERSMSI
                     LNGETPDDRLFPFICKLDDASEVENSEIWEKANPMFSKPMSHYAKGLFRKVKNQYNEM
                     SFSPTKRQEFMTKRMNLPEVDLEKVVAPWEEILATNRPLPELERKQCIGGLDYASIKD
                     FAAVGLLFRDGENYIWKSHSFVRKGFLDTVKLKAPIHEWEKQGLLTIVDEPSIDPLHI
                     VMWFDMMRETYGLEKVVADNFRMDLLRPYFEDYDIEIEVIKNPKAIQSLLAPRIETMF
                     ANHRVIFGDNPLMRWYTNNVAVKTKPDGNKEYIKKDEVRRKTDGFHALVHALYRADEL
                     LEVDINESLDFLNAIDF"
     gene            1594..>1851
                     /locus_tag="PTC28_002441"
     CDS             1594..>1851
                     /locus_tag="PTC28_002441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDK5717664.1"
                     /translation="MGLFDSILKRNKELTWMYDLDMFEDDTTNAYLKRTTLQTCIEFI
                     ARTLSQTEFKITQDHKTIKDESYYKLNVRPNTDMSATDFWQK"
BASE COUNT          647 a          259 c          382 g          563 t
ORIGIN      
        1 aaataaagaa cgcattttac ttattgcata tttagaaaaa tacgttttga accgtgaaga
       61 tttatatttt gatgaggttc aaattgaaaa tttcatcaaa ttcactgaaa aatggtattt
      121 tccattgcaa ccattccaaa aatttataat cccatttatt tttctgttcg agaaagaagg
      181 agacttctta tactacgagc agttttttat tactcttgga cgtggtggcg gtaaaaacgg
      241 cttgattact gcgttatcca attattttat ctcttatttg catggcgttc ctaattatga
      301 catatcagtt gtggcaaact cagaggatca agcaaaaaca tcatttgaag aggcctataa
      361 catgattgaa aaaaataaac tcgaggatgt atttcacaaa acaaaatcag tgattactga
      421 tactgaaaca aaatcacgtt ttagatttag aacttctaat gctggcacaa aagatggtgg
      481 gcgtgaaggg tgcgtgattt acgatgaagt acacagattt gaagatagtg aaacagttga
      541 cgttttcagt tctggactag ggaaagtaaa atggccaaga gaatttttta ttggcactga
      601 tggttatgtt cgtgatgggt ttttggataa gttgaaagaa cgttcgatgt cgattttaaa
      661 tggtgaaacg ccagatgata gattgtttcc attcatttgc aagttagatg atgcgtcaga
      721 agttgaaaat tctgagattt gggaaaaagc aaatcctatg tttagcaagc caatgagtca
      781 ttatgcaaaa ggattgttca ggaaagttaa aaatcaatat aacgagatga gttttagtcc
      841 tacgaagcgg caagaattta tgacaaagag aatgaattta cctgaagtag atttagaaaa
      901 agtagtcgcg ccttgggaag aaatcttagc aacgaatcga ccgcttccag aattagaaag
      961 aaagcaatgt ataggtggtt tggactatgc aagtattaaa gactttgcag cagtaggttt
     1021 attatttcga gatggagaaa attacatttg gaaatctcat tcgtttgtta gaaaaggatt
     1081 tttagacaca gtgaaattga aagcaccaat tcatgaatgg gagaaacaag ggttattgac
     1141 cattgttgat gagccttcaa tagacccatt gcatatagtg atgtggtttg acatgatgcg
     1201 tgaaacatat ggtcttgaaa aagtcgttgc cgataatttt agaatggact tgctgagacc
     1261 gtattttgaa gactatgaca tcgaaattga agttattaag aatcctaaag ccatccaatc
     1321 cttattagct ccacgaattg agactatgtt cgctaaccat cgtgttattt ttggagataa
     1381 tccattaatg cgctggtata caaacaatgt agctgtgaaa actaaacctg acggcaacaa
     1441 agagtatatc aaaaaggacg aagtgagacg gaaaactgat ggattccatg cattagttca
     1501 tgcactgtat cgtgctgatg aacttttaga agtagatata aacgaaagct tagatttttt
     1561 aaatgctatt gatttttaga gaggagggta aagatgggat tatttgattc tattttaaaa
     1621 agaaataaag agctgacttg gatgtatgac cttgacatgt ttgaagacga tactacaaat
     1681 gcttatttaa aaagaacaac acttcaaacc tgtattgaat ttattgctag gacgttgtca
     1741 caaactgagt tcaaaattac tcaagatcat aaaacaatca aggatgaaag ttactataaa
     1801 ttgaatgtac gacctaatac ggacatgtcc gcaactgatt tttggcaaaa g
//
LOCUS       DANHPA010000199         1836 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.204, whole genome shotgun sequence.
ACCESSION   DANHPA010000199 DANHPA010000000
VERSION     DANHPA010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1836)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1836)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1836
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.204"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            335..757
                     /gene="fosB"
                     /locus_tag="PTC28_002442"
     CDS             335..757
                     /gene="fosB"
                     /locus_tag="PTC28_002442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FosB/FosD family fosfomycin resistance
                     bacillithiol transferase"
                     /protein_id="HDK5717665.1"
                     /translation="MIKAINHITYSVSDLRNSIKFYKDILKATLLVEGKHTAYFTLGG
                     VWLALNEEKNISRNEIKQSYTHIAFSISESDFDSWYYWLKCNQVNILKGRERNIKDKQ
                     SIYFTDHDGHKIELHTGTLQERLDYYQQEKTHMKFFKH"
     gene            825..1154
                     /locus_tag="PTC28_002443"
     CDS             825..1154
                     /locus_tag="PTC28_002443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717666.1"
                     /translation="MIEYEWKHLKPENRESGQFIEVLHPDFKEFGMSGKVYDRSDFEC
                     IELHVAEYEISDFQVEHLAEDCRLCTYTLIDHTRHIKTNRTSIWKMHEGDWKLLFHQG
                     TVKQDPY"
     gene            complement(1259..>1836)
                     /locus_tag="PTC28_002444"
     CDS             complement(1259..>1836)
                     /locus_tag="PTC28_002444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1829 domain-containing protein"
                     /protein_id="HDK5717667.1"
                     /translation="LAGIDIHTKARSILIQNVLNQFNLVLDGEEIVTNVKNNSFAQSK
                     HNLIQGILKIYDLTLTTKSNVSRLFYEEVFDFLYNEEILGSAKVSVSGESGIKYFIDF
                     ILPETKSKPEKLINFANHLDFNKVTTDAFMYRDVKHNRPSRSGLAPQMLIVANDVEHP
                     ITAKARQAAEHEHLSILHWSDKDRIKAILTQ"
BASE COUNT          631 a          246 c          339 g          620 t
ORIGIN      
        1 agggattgaa ttgcgcttgg aatgatttaa gtcagccaaa atccaaggcg taataggact
       61 aaataacgac cttttttgca tgaaagatgg aggatatatc cgaggtcatc gcaagtatat
      121 tatttcataa tagcgttgca cgataaaaat gtaaaatcat ttttaaattc gatatatttc
      181 atggtacact tttttatcac atgtttttag tggcatatgc gataaatcac atgtattaaa
      241 cagtgggctt tctaactatt attttattaa cacaaaatat agtttaaaat atcgttgaga
      301 taaaagaagt cgtgatgtat taaatgagga tttcatgatt aaagctatca atcatatcac
      361 atattctgtt tcggatttaa ggaattctat taagttctat aaagatatct taaaagcgac
      421 attattagtt gaagggaagc atacagctta ttttacacta ggaggtgttt ggttagcact
      481 aaacgaggaa aagaacatat ctagaaatga gataaaacaa tcatacacac atattgcatt
      541 ttctataagt gaaagtgact ttgacagttg gtactattgg ctaaagtgta atcaagtgaa
      601 tatattaaag gggagagaaa gaaatataaa agacaagcaa tcgatttatt ttacagatca
      661 tgatggtcat aaaatagagt tacataccgg tactttacaa gagcgtttag actattatca
      721 acaagaaaaa acacatatga aattttttaa gcattaaaca cgaatcactt ttattaagga
      781 agtgatggtg ctgttaatac acaattactt gaaggaggca ttaaataatt gaatacgaat
      841 ggaaacattt gaagcctgaa aatcgggaaa gtgggcaatt tattgaggtt ttgcatccag
      901 attttaaaga gtttggtatg tcgggaaaag tgtatgatag gagtgacttt gaatgtattg
      961 aattacatgt agctgagtat gaaataagtg attttcaagt tgaacattta gcagaagatt
     1021 gtagattatg tacatatact ttgatagatc atacgcggca cattaagaca aatagaacat
     1081 caatctggaa aatgcatgag ggtgattgga agttattgtt tcatcaagga acagtgaaac
     1141 aagatccata ttaacatgga aaagcaccta agactttgag aaagtctagg tgcagtttta
     1201 ttcttagctg gaaatattga attggagtta tttcaacttt gaatcttctg ttattacttt
     1261 actgtgtcaa aatggctttt atcctatctt tatctgacca atgtaatatt gaaagatgtt
     1321 catgctctgc tgcttgacgg gctttagctg taattggatg ctcaacgtca tttgcgacga
     1381 tgagcatttg aggggctaat ccgcttctac taggtctatt atgtttaaca tctctgtaca
     1441 taaaagcatc agtcgtcact ttattaaaat ctagatggtt tgcaaaattg ataagttttt
     1501 caggttttga ttttgtttcc ggtaaaatga aatcaataaa atatttgatt cctgattctc
     1561 ctgaaactga aacctttgcc gaacctagaa tttcttcgtt gtataaaaaa tcgaatactt
     1621 cttcataaaa gagtcgtgac acatttgact ttgtcgttaa tgttaaatca tatattttta
     1681 aaatcccttg tatcaagtta tgttttgact gagcgaaact attatttttg acattagtga
     1741 caatttcttc tccatctaaa acgaggttaa attggtttaa cacattttga atgagtatac
     1801 ttctggcttt tgtatgaata tcaatacctg cgagct
//
LOCUS       DANHPA010000200         1787 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.205, whole genome shotgun sequence.
ACCESSION   DANHPA010000200 DANHPA010000000
VERSION     DANHPA010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1787)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1787)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1787
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.205"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            370..933
                     /locus_tag="PTC28_002445"
     CDS             370..933
                     /locus_tag="PTC28_002445"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HDK5717668.1"
                     /translation="MCQVLGVSRSGYYDWTNRKPSARIVKREGLKKLGIRSITKKKYK
                     ATTHSKHQLPVSTNLLNQQFKVSQPGSVWSTDITYVYTKEGWFYLATVMDLFSRRIIG
                     WAMAPRMTKTLVISALNKAYTIQEPREGLVHHSDQGSQYASIEYQNLLREKGIQSSMS
                     RKGNCYDNACIASFHSIIKKELISSEL"
     gene            950..1078
                     /locus_tag="PTC28_002446"
     CDS             950..1078
                     /locus_tag="PTC28_002446"
                     /inference="COORDINATES: protein motif:HMM:NF024729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717669.1"
                     /translation="MFSIVEYLLTFYNSKRVHSTLNDMSPIKFEKKYATQSPSAAR"
BASE COUNT          619 a          302 c          323 g          543 t
ORIGIN      
        1 ataataaaag aaatcaattt ataggagtgt cagtgatggc gagaagaaaa tacgagcata
       61 gctttaaaat ggaagcaatt taattagtag aattagggag acgtgcctca gaagtttcta
      121 gaaatctaga tattcctatt caaaccttaa caagatggct gagtatatac cgtaaagacg
      181 gtgaaaaggt tttgtcagta gcggtaaacg ggcgtcaaag aagcaaacag aagctgattt
      241 agaaaagcga ttaagagatt tagaagaaga gaataaaatc ttaaaaaagg ctatgcacat
      301 ctttgccaaa gactagaaat catatacaag tttatctatg aacaccgaca tgaatttcgt
      361 gtcgtaaaga tgtgccaagt tctaggtgtt tcgagaagtg gttattatga ttggacaaat
      421 cgtaagccaa gtgcgcgcat agtgaagcgt gaaggtttga agaagctcgg tataagatct
      481 atcacaaaaa agaaatacaa ggcaacgacc cattcaaagc atcagcttcc tgtatccacc
      541 aatttattga accaacagtt taaagtatcg caacctggca gcgtatggag cactgacatt
      601 acgtatgtct acacgaaaga aggatggttc tatttagcca cagtcatgga cttattttcc
      661 cgtagaatca ttggttgggc gatggcacct cgtatgacta aaacacttgt gatatcagct
      721 ttaaacaaag cgtatacaat tcaagaacct agagaggggt tagtccacca ctcagaccaa
      781 ggaagtcaat atgcatcaat agaatatcaa aatttactac gtgaaaaagg gattcagagc
      841 agtatgagtc gtaaaggaaa ctgttacgac aacgcatgta tagcatcttt tcatagtatt
      901 atcaaaaagg aattgatatc atcagaacta taaaaccagg gtagaagcaa tgtttagcat
      961 tgtggagtat ctccttactt tttataattc taaacgagta cattcaacgt taaatgatat
     1021 gagccccatt aaatttgaga agaaatacgc aacacaatca cctagcgcag cgcggtagaa
     1081 ttctcttttt tctgtgtccg tattcttggc atagatccat acctcttcct acactttata
     1141 accgccattt acaacaagct tttcgttgtt tctgttagtt ataaaaacaa tcataattct
     1201 tttcaaaatt tagttattgc agcatctgcg cctttgatat gtgtaagttt aggcttgatt
     1261 ttattaatac taggttatct caacatttta accttagtgt ttttgtctaa tattttcaac
     1321 tttttacctg ttacacaaga tggtcaaata attttaattt caataattat agccagctca
     1381 gcgtaatttg gttttatgct tttcataatg taaaatgaca ctccttcgta tatctcatgt
     1441 ctcaatcaaa caacctccat tcaaagattg agttaagaca tgattatata ttttagaaaa
     1501 taaaaatgta ggaaaaacag cattttcatt ccgccatttt cctacatttt ataaccgcca
     1561 tttacaaagg ctacattaaa actattggtg agctaaacca aaaggttcaa ttaaccaatg
     1621 aacgttctac cgattctatt tggttaccgt ttgattgttt gtatgatata aaaatttaaa
     1681 ctataggaga tgttgtttat tgtctaatat taatttccct gacccgttcg gaaaaagcat
     1741 ggagaatttt caaaaatggg gagagtcgtc gcaagagtaa atacatt
//
LOCUS       DANHPA010000201         1771 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.206, whole genome shotgun sequence.
ACCESSION   DANHPA010000201 DANHPA010000000
VERSION     DANHPA010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1771)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1771)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1771
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.206"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            102..464
                     /locus_tag="PTC28_002447"
     CDS             102..464
                     /locus_tag="PTC28_002447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulator"
                     /protein_id="HDK5717670.1"
                     /translation="MNNHFDMETEAIFFYESNRKKIISELKKQHGLKLNDILFLYHLK
                     TTNSRRISLHKVKQSIDFSLMEIHKSLTALTEKNIIGKERSTEDERKVFITIDDAQAE
                     NMQQLLDNFNQIQKDILQ"
     gene            893..1762
                     /locus_tag="PTC28_002448"
     CDS             893..1762
                     /locus_tag="PTC28_002448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717671.1"
                     /translation="MSLLLWFLICVLFILVLLALLRLKFYQHQLDVEAYTKMQLLNKI
                     SILKQERYQSKEKRAITTTYHLNLRNTRQLLNHLLEDFKSDEKIKDFRIITTSQIAPK
                     NPLFPFISEFDFIVITNVGMILMNIKSLKSKTFYHFDSRIPTTDEQDLNRIVGHYIAH
                     QYHNQFQSDLKTSYTFNEIISENKITYEFHEYDPYQIAERATQNIQEAVESFVQVPVS
                     TIGVIYCVDQRGERIDGDAQPYSRIYTSESETDIQYAIQALIDTSHTQLESHTMQQLV
                     SSFENHHESSKHQ"
BASE COUNT          651 a          310 c          267 g          543 t
ORIGIN      
        1 gctgtttttt tgaattactt taagaatatt cttttaaaag tataaatttt ttaatataat
       61 ataacttagg gtaataggaa agttgataaa ggagtgaaat tatgaacaac cattttgata
      121 tggagacaga agctatcttc ttttacgaat caaatagaaa gaaaattatc agtgaactta
      181 agaaacaaca tggcctaaaa ctgaatgaca ttttgttttt atatcacctt aaaacgacaa
      241 atagtcgtcg tatttcatta cacaaagtca aacaatcaat tgattttagt ttaatggaga
      301 tacataaatc gttaacggcc ttaacagaaa aaaatatcat tggtaaagaa cgttctacag
      361 aagatgaacg aaaagtcttc attacaattg atgatgcaca agcagaaaat atgcaacaac
      421 tacttgataa cttcaatcaa attcaaaaag acattttaca ataattggct aaccttgaat
      481 tggtaaactc caaattacag atatcattcc ggtgatatct gtaattttat aagacagggt
      541 ttgaattggt atccgtagta tatcacgata taaccactgc aattttaacg caataatcac
      601 cttgtactat ttaaacaaac gaatcagttg cgcctgtaat tgaaaagctt gatttcagac
      661 taactcgaac ctccacctta gactaagatg acacaccttt agcaatgact ttccaatggc
      721 ttgagcctct ttgcatgttc tacgctacaa cgagccccct atcaaaatgc acaaaattag
      781 acattaatga ataattaaca tatgattaag attaactata ccctttcatc tgttgacccc
      841 atatgcgatt agcgtgattc gcgttttaaa ctctaggaag gaggatacat agatgtcatt
      901 gttattatgg tttttaattt gtgtactttt tattttagtt ttattagcgc tcctacgtct
      961 aaagttttat caacatcaac tcgatgtaga agcttataca aagatgcaac tactcaataa
     1021 aatttccatc ttaaaacagg aaagatatca atctaaggag aaacgggcga ttacaacgac
     1081 gtatcatctt aatttgagaa atacacgaca actgttgaat cacttgctag aagatttcaa
     1141 aagtgatgaa aaaattaagg atttccgcat tattacaaca agtcaaattg caccaaaaaa
     1201 tccactattt ccatttatct cagaatttga ttttattgtg attacgaatg tcggcatgat
     1261 tttaatgaac atcaagtcat tgaaatccaa aacattttat cattttgata gtcgcatacc
     1321 tacaacagat gaacaagatt tgaatcgcat tgtcggtcac tatattgcac atcaatatca
     1381 caatcaattt cagtctgact taaaaacatc gtacacgttt aatgaaatta tttctgaaaa
     1441 caaaatcacc tatgaatttc atgaatatga tccgtatcaa attgctgaaa gagcaacaca
     1501 aaacatccaa gaagctgttg aatcattcgt acaagtgcct gtatcgacaa tcggtgtgat
     1561 atattgtgtt gaccaacgtg gcgaacgtat tgatggtgac gcacagccat atagccgcat
     1621 ttatacgagt gaaagtgaaa cagacattca atatgcgatt caagcgctca ttgatacgtc
     1681 tcatacacaa ctcgaaagtc atacaatgca acaattagta tcatcgttcg aaaaccatca
     1741 tgaatcgtca aaacatcaat aaggttattc a
//
LOCUS       DANHPA010000202         1740 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.207, whole genome shotgun sequence.
ACCESSION   DANHPA010000202 DANHPA010000000
VERSION     DANHPA010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.207"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            187..1425
                     /locus_tag="PTC28_002449"
     CDS             187..1425
                     /locus_tag="PTC28_002449"
                     /inference="COORDINATES: protein motif:HMM:NF019310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5717672.1"
                     /translation="MKEVHKLLLGRVLTNIGDSIVLISLTWYVAVTYHNTLYLGIIGV
                     IVGVIDVFMFFLGPILDRYNIKKILCISTLAQVFIVILMSLYFLLDHHHLLILYILLS
                     MSTLFSSVIYPAESVLIPKLSTDARQVVKYNAIFQMTYKGLDVVLDALVGVLLSIFLI
                     VNIFSFNVIIFVVAFFVFKLLRLNSTTIHHKDNIEASDRILSRYLADLKEGMIYVSRP
                     KILKLLLPLSIINFSLSAVTVIYPKIAVLEGNDSKVFSLILFVNGLGLILGYLVGPRI
                     IRYIKFSKLLFSSFFILFIIWLCIYLFINVSYVYILPMFLVSNIMIGIINLAFINAFQ
                     LLPPQNMLGRVATTNETLLSILIPFGAFTGGILPQLFGTININFILVSIACLVISIFY
                     VIDKDIKKMNDLMMTGDEQL"
     gene            1422..>1740
                     /locus_tag="PTC28_002450"
     CDS             1422..>1740
                     /locus_tag="PTC28_002450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717673.1"
                     /translation="MNYDVIIIGAGPAGIYSSIILKRGIPTQNVEENISVGIIEKGLI
                     GGFTRYAHIQISKQWSFSGSNLISNLYNEAKNLNVHFHSNEEVTNIEKICNDKFLIKT
                     NSKI"
BASE COUNT          569 a          214 c          304 g          653 t
ORIGIN      
        1 agatagtttt ggatttagaa acatttcagc tcaatatttt aaagatgcaa atagtggatt
       61 gtgtgtgttt aaaattgcta ttggacattt aaaaggagcc aaatattatt tgctattaga
      121 tagttttaaa aaaacaaata atttgaagaa aaatgatttt gttaaaaaat atgtggagtg
      181 ggtgaaatga aagaagttca caagttactt ttgggacgag tgctaacaaa tattggagat
      241 agtatcgtac tcatctcatt aacgtggtat gtcgctgtca cttatcataa cacgttatac
      301 ttaggcatca ttggtgtcat cgtaggggtt attgatgtat ttatgttctt tttagggccc
      361 attttagata gatataatat taaaaaaatc ttatgtatta gtacacttgc acaagttttt
      421 atagtgatac tgatgtcttt gtatttctta ttagatcatc atcatttgct tattttgtac
      481 atattgttaa gtatgtctac actattttcg tctgtgattt atcctgcaga aagtgtactt
      541 attcctaaat tatctactga tgcgcgtcaa gtggttaaat ataatgcaat atttcaaatg
      601 acatataagg ggctagatgt ggtattagat gctttagttg gggttttact cagtatattt
      661 ttgatagtga atatcttttc gtttaatgtc atcatatttg ttgtggcctt ttttgtgttt
      721 aaactgctta ggttaaattc aacaacaatt catcataaag acaatataga agctagcgac
      781 cgaatattaa gtcgttattt agcagattta aaagaaggga tgatctacgt atcgcgtcct
      841 aaaatattaa aacttttgct tcctttgtcc attatcaact tttctctctc agctgtaacg
      901 gtaatttatc ctaaaatagc tgtgcttgaa ggaaatgata gtaaagtgtt ttcattgatt
      961 ttatttgtta atggtctagg gctcatatta ggttacctag taggaccaag aatcattaga
     1021 tatatcaagt ttagcaaatt actatttagc agctttttca tactgttcat tatatggtta
     1081 tgcatttacc tattcattaa tgtaagttat gtttatatat taccgatgtt tttagtttca
     1141 aatatcatga ttggaataat caacttagct tttatcaacg cgtttcaatt attgccacct
     1201 caaaatatgc taggtcgtgt agcaactaca aatgagacat tactgagtat tttgatacca
     1261 tttggggcgt tcactggtgg gattttacct caactttttg gtacgatcaa tatcaatttt
     1321 attttagtga gtattgcgtg tttagtaatt tcgatttttt atgtaattga taaagatatt
     1381 aagaaaatga atgacttaat gatgacggga gatgagcagt tgtgaattat gatgttataa
     1441 taataggtgc tggaccagca ggtatttatt caagtattat tttgaagaga ggtataccta
     1501 cccagaacgt tgaagaaaat atttctgttg gaataataga aaaaggtctt ataggtggat
     1561 ttacacgata tgcacatata caaatatcaa agcagtggtc attttcagga tctaatttaa
     1621 tcagtaattt atataacgaa gctaaaaatt taaatgtaca ttttcattca aatgaagaag
     1681 taactaatat tgaaaaaata tgtaatgata aatttttaat aaaaaccaac tcgaaaattt
//
LOCUS       DANHPA010000203         1691 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.209, whole genome shotgun sequence.
ACCESSION   DANHPA010000203 DANHPA010000000
VERSION     DANHPA010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.209"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..810
                     /locus_tag="PTC28_002451"
     CDS             <1..810
                     /locus_tag="PTC28_002451"
                     /inference="COORDINATES: protein motif:HMM:NF012493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717674.1"
                     /translation="HIIVLSRFINHIQALKRQFEKLNQETNVYILNSHMKTSQLKEEM
                     TALKEEGKPFVLFTTGSYAGEGFDLPALDTLMLVMPIKAKGSIQQYLGRLLRNLNDKE
                     ELRVYDYVDYAIPMFYKMYMKRLRTYKTLGYILEENSGSELYQSNMIEGDYMSLLMKD
                     LKAANWTVFMMAYLSKDMIHWLVSLDDLHSTDKIIVMSEKTERIMAKNLTPLYESGFQ
                     IQVVPKVSQNFIIIDNRLVWMLSSTREDDVKHQMSLRLFSESIAKKLVNKT"
     gene            967..>1691
                     /locus_tag="PTC28_002452"
     CDS             967..>1691
                     /locus_tag="PTC28_002452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDK5717675.1"
                     /translation="MNKYERLDEIARRVNEKGTIRITDIVEDLNVSDMTVRRDLIELE
                     EQGILTKIHGGARSNKASQYKEMSHREKHTRKSEEKLEIAKKAAKLIEDGNVIFLGPG
                     TTVEMLAKEIDNQRLSIVTNCLPVFQILEHKRSEQFSVYLIGGSKRQLTESFVGEMAN
                     TLLEKMRFSKIFFSANGIKGNDVMTSSYEEAYTQNLAIKHSNEKYILADDSKIGKEDF
                     VSFCELKDLTAIVTNTLNNDQLQ"
BASE COUNT          635 a          210 c          341 g          505 t
ORIGIN      
        1 catatcatcg tgctatcacg ttttattaat catattcaag cactaaaaag acaatttgaa
       61 aagttaaatc aagagacaaa tgtgtatatt ttaaatagtc atatgaaaac ctcacaatta
      121 aaagaggaaa tgacagcatt aaaagaagag gggaaaccgt ttgttctctt tacaacagga
      181 agttatgctg gcgaaggatt tgacttgcca gcgttagata cattaatgct agtgatgcct
      241 ataaaagcaa aaggaagtat tcaacagtat ttagggagac tcttgagaaa cttgaatgat
      301 aaagaagagt tacgtgtata tgattatgtc gattatgcga tccctatgtt ttataaaatg
      361 tatatgaagc gattacgcac gtataaaacg cttggttata tattggagga gaatagcggt
      421 tcagagttat atcaaagtaa tatgattgaa ggggattata tgtcattact catgaaagat
      481 ttgaaagcag ctaattggac tgtattcatg atggcttatt tatccaaaga tatgattcac
      541 tggctggtgt cattagatga tttacattca acagacaaaa taattgttat gtcagaaaaa
      601 acggaaagga taatggcaaa aaatttaaca ccattatatg aaagtggctt tcaaatacaa
      661 gtggtaccca aagtgagtca aaatttcatc attattgata atagacttgt gtggatgttg
      721 tccagtacga gagaagacga tgttaaacat caaatgtctt tacgcttgtt tagtgagtcg
      781 atagcgaaga aattagtgaa caaaacataa aaacacagaa tgcacaatga tgtttgaatt
      841 tgttggaaat atcgtttttg tgtgactttc aaacattttg tagtaacctt atgataatat
      901 atgtttgaaa tgttaaatat aacttaagat aagtattaaa aacgttaata taaaggtgtg
      961 aaatgtttga acaaatatga acgactagat gagatagcac gtcgagtaaa cgaaaaaggt
     1021 acaatacgta ttacggatat tgtggaagac ttgaatgtgt ccgatatgac tgtaagacgg
     1081 gatttaatcg aattagagga acaagggata ttgacgaaaa tacatggggg tgccagaagt
     1141 aataaagctt ctcaatataa agagatgtct caccgtgaaa aacatacccg aaaaagcgaa
     1201 gaaaagttag aaattgctaa aaaagcggca aagttgattg aagatggaaa tgttattttt
     1261 ctaggtcctg gtacaacagt tgaaatgtta gcgaaagaaa tcgataatca acgcctatct
     1321 atcgtgacta attgtttgcc tgtttttcaa attctagaac ataagcgttc agaacaattt
     1381 tctgtgtatt taatcggtgg ttcaaaaaga cagttaacag aatcatttgt tggtgagatg
     1441 gccaatacat tgttagaaaa aatgcgcttc tcaaaaatat tttttagtgc aaatgggatt
     1501 aaagggaatg atgtgatgac gtcatcttat gaggaagcct atacacaaaa cttagctatt
     1561 aagcactcaa atgaaaaata tattttagct gatgattcaa aaataggaaa agaggatttt
     1621 gtatcatttt gtgaattgaa agatttaact gcgattgtaa cgaatacttt gaacaatgat
     1681 cagttgcagt a
//
LOCUS       DANHPA010000204         1661 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.210, whole genome shotgun sequence.
ACCESSION   DANHPA010000204 DANHPA010000000
VERSION     DANHPA010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.210"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..>1661
                     /locus_tag="PTC28_002453"
     rRNA            <1..>1661
                     /locus_tag="PTC28_002453"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          423 a          360 c          515 g          363 t
ORIGIN      
        1 ttctaagggc gttgaagcat gatcgcaagg acatgtggag cgcttagaag tgagaatgcc
       61 ggtgtgagta gcgaaagacg ggtgagaatc ccgtccaccg attgactaag gtttccagag
      121 gaaggctcgt ccgctctggg ttagtcgggt cctaagctga ggccgacagg cgtaggcgat
      181 ggataacagg ttgatattcc tgtaccacca ttattcgttt taagcgatgg ggggacgcag
      241 taggataggc gaagcgtgct gttggagtgc acgtccaagc agtgagattg agtgttaggc
      301 aaatccggca ctcttaagat tgagctgtga tggggagagg aacttgttcc tcgagtcgtt
      361 gatttcacac tgccgagaaa agcctctagc tagaataacg gtgcccgtac cgcaaaccga
      421 cacaggtagt caagatgaga attctaaggt gagcgagcga actctcgtta aggaactcgg
      481 caaaatgacc ccgtaacttc gggagaaggg gtgctctttg aggttcacgc ttcgaagagc
      541 cgcagtgaat aggcccaagc gactgtttat caaaaacaca ggtctctgct aaaccgtaag
      601 gtgacgtata ggggctgacg cctgcccggt gctggaaggt taagaggagt ggttagcgca
      661 agcgaagcta cgaatcgaag ccccagtaaa cggcggccgt aactataacg gtcctaaggt
      721 agcgaaattc cttgtcgggt aagttccgac ccgcacgaaa ggcgtaacga tttgggcact
      781 gtctcaacga gagactcggt gaaatcatag taccggtgaa gatgccggtt acccgcgaca
      841 ggacggaaag accccgtgga gctttactgt agcctgatat tgaaattcgg tacagtttgt
      901 acaggatagg taggagcctt agaagcgtga gcgctagctt acgtggaggc attggtggga
      961 tactacccta attgtattgg atttctaacc cgcagcactt atcgtgctgg gagacagtgt
     1021 caggcgggca gtttgactgg ggcggtcgcc tcctaaagag taacggaggc gctcaaaggt
     1081 tccctcagaa tggttggaaa tcattcatag agtgtaaagg cataagggag cttgactgcg
     1141 agacctacaa gtcgagcagg gtcgaaagac ggacttagtg atccggtggt tccgcatgga
     1201 agggccatcg ctcaacggat aaaagctacc ccggggataa caggcttatc tcccccaaga
     1261 gttcacatcg acggggaggt ttggcacctc gatgtcggct catcgcatcc tggggctgta
     1321 gtcggtccca agggttgggc tgttcgccca ttaaagcggt acgcgagctg ggttcagaac
     1381 gtcgtgagac agttcggtcc ctatccgtcg tgggcgtagg aaatttgaga ggagctgtcc
     1441 ttagtacgag aggaccggga tggacatacc tctggtgtac cagttgtcgt gccaacggca
     1501 tagctgggta gctatgtatg gacgggataa gtgctgaaag catctaagca tgaagccccc
     1561 ctcgagatga gatttcccaa cttcggttat aagatccctc aaagatgatg aggtgaatag
     1621 gttcgaggtg gaagcgtagc gatacgtgga gctgacgaat a
//
LOCUS       DANHPA010000205         1653 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.211, whole genome shotgun sequence.
ACCESSION   DANHPA010000205 DANHPA010000000
VERSION     DANHPA010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1653)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.211"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(1..1612)
                     /locus_tag="PTC28_002454"
                     /pseudo
     CDS             complement(1..1612)
                     /locus_tag="PTC28_002454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000108743.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
BASE COUNT          416 a          326 c          281 g          630 t
ORIGIN      
        1 tttctgcttc tttttctttc tgttcctggt aatcagcaaa acttaatttc tctatatcgg
       61 taggtacatt ttccaataaa tgaacgataa acttcttgat attattaata aagttttctt
      121 gattgccttc tcttttacca atcttcttta aatacgtttc ccatttagcc gtcatttcag
      181 cactcgttaa gaggtgctga ctttcgactg cctggcacaa taatttacct ttttcagtca
      241 caacaagttt atttttaatg acttggatat attctttttg tttcaaggct tcaataatgc
      301 ttgctcttgt cgcttctgtt ccgatcccct cgacttcttg taaaatcttg attgcttctt
      361 catcatcaac cgttttatta gcggttttca tagcagttaa taatgtaccc tctgtaaaag
      421 ctttcggtgg ttgtgtttct ttttcggcac tcttaacgtc aacctcggca tgttctccaa
      481 tgataaccaa gggtaacgtt tgaacgtcct ctttttcttc tttggtttgt tgtttgaaaa
      541 gaattttcca accttcttgt tttggtgtct ttccgatcga ttgaaacagc aaatcagcta
      601 ctttcgtttg tatcttggtt tcttcataca agtaatcagg taaaaacatg gcaacggtcg
      661 ttttaacgac taaagcataa atttttcgtt gcaaatcgtc cattttcgct aatgcagatt
      721 cggtaggtac ttgttttgtt gggataatgg cgtggtgttc ctgtacctta ctaccgtcca
      781 cataacgctt tctaggctct gtttgaacca tttcaagatc aagtcctaaa aaaccgctat
      841 atttgccaaa attcgctttt aaataagcaa attcgttctc tgtaataaat ggtgtatctg
      901 ttcttggata actcaataat tttgcttcat acagtccttg catagctttt aaagtttggc
      961 tcgctgtcgc tttataaagc tgattgactt ttgattgcaa actacttaaa gaaaacaaac
     1021 tcggactatt cgttttcttc tctttggttt gcacgtcagc gattctgccc tcttgattgc
     1081 ctattttagc ttgtttagaa gaaacaaagg ataaaagttc ctcttggctc ttaaatcgct
     1141 gtgtggggct tagaacgccc ttaaatgacc cttggtttac ttttatacta gcttccacct
     1201 cgaaaaaagg ttctttttta aagttttcta tggcttcctg gcgctgaaaa ataaggtata
     1261 aggtgggcgt ttgaacacgt cctagtgaaa atgtaccctg tacgcccttc tgctgtaaat
     1321 ttaacgtata caaagggctt gtgttcattc cgatcaacca atcggcaatt tgccgtgttt
     1381 gtgcttcttg ataaaagggg tagtaattca ttcctggttg taagttttga aaaccgctac
     1441 ggatcacatc tttttctaaa ctattaatcc ataatctttt atacgtttta tctttagaaa
     1501 atgcatttgc tttatgaatg atcgaccagg caatgttttc gccttctctg tcgctatctg
     1561 ttgcgacaat gattgtattt gcttgtttta aaagttcagc aacaatttta taagtagttc
     1621 agttttggag tacaaaatga caaaatgtac ttc
//
LOCUS       DANHPA010000206         1638 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.212, whole genome shotgun sequence.
ACCESSION   DANHPA010000206 DANHPA010000000
VERSION     DANHPA010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1638)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1638)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1638
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.212"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            54..989
                     /gene="sph"
                     /locus_tag="PTC28_002455"
     CDS             54..989
                     /gene="sph"
                     /locus_tag="PTC28_002455"
                     /EC_number="3.1.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000676801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sphingomyelin phosphodiesterase"
                     /protein_id="HDK5717676.1"
                     /translation="MLLGIMNTGVSHAASDENQAELKLATHNVYMLSGFLYPNWGQSK
                     RADLISKSKYIQDNDVVIFNEAFYPASANQLFNNLKSSYPYQTAVLGRSTSGWDRTEG
                     HYSSTTFENGGVAIVSKYPIKERIQHIFQHGCGFDNDSNKGFVYTKIEKNGKFVHVIG
                     THTQSEDTRCSVGQDRAIRAEQMKEISNFVKSKNIPKDEVVYIGGDMNVNKNAGNGEF
                     QDMLKNLNVSDVTYTGHSSTWDPQSNSIAKYNYPNSAPEYLDYIFVDKDHRQPGQLIN
                     EAVAEKSPTWDVYKFPYLYVYNDYSDHYPVKAYSK"
     gene            complement(1275..>1638)
                     /locus_tag="PTC28_002456"
     CDS             complement(1275..>1638)
                     /locus_tag="PTC28_002456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717677.1"
                     /translation="EQDTDYDGSEYFIAKYEELDGLVGTGDSEIKAVNDLLTIKKDWF
                     EANLNVGTPIPEPMTKKIEEQTRLTLRLPSHIDKQLNQYMQRENVSKNTAIIVLLQSG
                     LYHNFHEEIENKVSHRLN"
BASE COUNT          558 a          313 c          256 g          511 t
ORIGIN      
        1 tgaaaaaatt aaaacaaaaa aaacgattaa catcactatt attagccact acaatgcttt
       61 taggtatcat gaatactggc gttagccatg ctgcttcaga cgaaaatcaa gcggaattaa
      121 aattagcgac gcacaatgtt tatatgcttt ctggtttcct ttatcctaac tgggggcaaa
      181 gtaagcgtgc agatttaatt tcaaaatcta aatatataca agataatgat gtcgtaattt
      241 tcaatgaagc attctatcct gcttcagcaa atcaactgtt caataatcta aaatcttctt
      301 atccttacca aactgcggta cttggccgtt ccacttcagg atgggaccgc actgaaggtc
      361 attattcaag tacgactttt gaaaatggtg gtgttgctat cgtaagtaaa taccctatta
      421 aagagcgaat tcaacatatc ttccagcacg gatgcggctt tgataatgat agtaataaag
      481 gctttgtcta tactaaaatt gaaaaaaatg gaaaattcgt tcacgttatc ggtacacaca
      541 cacaatctga ggatacacgc tgctcagtag gtcaagatag agcaattaga gctgaacaaa
      601 tgaaagaaat tagcaatttt gtaaaaagta aaaatatccc taaagatgaa gtagtttaca
      661 tcggtggtga tatgaatgta aataaaaatg ctggaaatgg tgaattccaa gacatgttga
      721 aaaacttaaa tgtcagcgat gtaacttata caggtcattc aagcacatgg gatcctcaat
      781 ctaactcaat tgccaaatac aattatccta atagtgcgcc agagtattta gactatattt
      841 ttgtagataa agaccatcgc caaccaggcc aactcattaa tgaagctgta gctgaaaaat
      901 caccaacttg ggatgtttat aaattcccat acctttatgt ctacaacgac tactctgatc
      961 actatccagt aaaagcgtat agtaaataaa agtagtccta actcaccgta tatttaatca
     1021 cacctgttcc tttcccaaca accaaacagg taactctaat atttccataa agaccgagac
     1081 gttcgttatc catcgcgaaa catctcggtt ttttatatga atcaattgca cggcacatca
     1141 tacagcactg tttataacga catttcatcc aatacaaaat acaagcgacc ttccataatc
     1201 catttgtact acagtaaaaa gctagaaacc ccgtcatatc aggattccta gcttttgatg
     1261 gtgattaatt caactcaatt aagacgatgt gaaactttat tttcaatttc ttcatgaaag
     1321 ttatgatata aaccagattg caacaaaact ataatggcag tatttttact aacattttct
     1381 cgttgcatat attgatttaa ttgcttatct atatgagagg gtagacgtaa tgtgagcctt
     1441 gtttgttctt caattttttt agtcattggt tctggtatag gcgtacctac gtttaaattc
     1501 gcttcgaacc aatctttttt tattgttaaa agatcattta cagcttttat ttctgaatca
     1561 ccagtaccaa caagtccatc tagctcttca tatttagcta taaaatattc actaccgtca
     1621 taatccgtat cctgctct
//
LOCUS       DANHPA010000207         1593 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.213, whole genome shotgun sequence.
ACCESSION   DANHPA010000207 DANHPA010000000
VERSION     DANHPA010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.213"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..664)
                     /locus_tag="PTC28_002457"
     CDS             complement(<1..664)
                     /locus_tag="PTC28_002457"
                     /inference="COORDINATES: protein motif:HMM:NF025025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDK5717678.1"
                     /translation="MKNKKPIFSIVITTYNSEASVLKTVYSALNQSIEASDYEIIVVD
                     DCSTDETFTLLKGLQGDNLKIFQLDENSGGPSKPRNIGIEKARGEYIFFLDGDDWLDE
                     NILEKVKGLDTCSKSDLIITRVIKDRDGKQSEHARFMTIEEVKHKNHEELPYFYYYLG
                     PIGKFVKRKILINHNIRFRDDLVFGEDKIFFMNCYNKINKVTVTKNISAYINRSQDNQ
                     SIV"
     gene            753..>1593
                     /locus_tag="PTC28_002458"
     CDS             753..>1593
                     /locus_tag="PTC28_002458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol--glycerophosphate
                     glycerophosphotransferase"
                     /protein_id="HDK5717679.1"
                     /translation="MQSVNVTQNGSKLTISFQQTSNTTSISKLYVKNEFHSITYPKNG
                     DDLEFEIDLDEVIQVFKQYDRDKAFVVVEENQEILTTQKNLKVFNNFSNVHKLHRYSD
                     GVNSIYPYISKNGFLHLSFTDNIPTKTYLLRRHIDDLMINNSSLSISGKFSLINSTME
                     TANIVITTRLSNHEKRIPFKTDRISGNTKTEVHEFSVDIYNEFIEFMQYPFDLEDIID
                     IYIDIHIQELKESIKVKLGNPRIMVERFLKGEIISHFENEIISATPYFTMKGRNLSFR
                     VNRY"
BASE COUNT          562 a          269 c          204 g          558 t
ORIGIN      
        1 taactattga ttgattatct tgagatcgat taatataagc tgaaatattt ttagtaaccg
       61 taactttatt gattttatta tagcaattca tgaagaatat tttgtcttcc ccaaacacca
      121 aatcgtctct aaatctgata ttgtgattga tgagtatttt tcttttaaca aatttcccaa
      181 taggtcctaa atagtaataa aaatatggta gctcctcatg attcttatgc ttcacttctt
      241 caatagtcat gaaccgtgca tgctcactct gtttgccatc tctatcttta atcactcttg
      301 taataattag atcactttta ctacatgtat ctaacccttt aactttctct aaaatattct
      361 cgtctagcca atcatcgcca tctaaaaaga aaatatactc tcctctcgcc ttttcaatcc
      421 caatgtttct tggtttagaa ggccctccag agttttcatc taactgaaat atttttaaat
      481 tatctccttg tagccccttt aataaagtaa acgtttcgtc tgtcgagcaa tcatccacta
      541 caatgatttc ataatcacta gcttcaatac tttgatttaa cgctgaatat actgttttta
      601 atacactggc ttcagaatta taagtcgtaa taacaataga aaaaatcggc tttttatttt
      661 tcatttatat cccccctaat gtataatgaa aagttgtaaa agctgcttat ggatttttaa
      721 ccaagaacta gcttaacatg gaggttatga aagtgcaaag tgttaatgta actcaaaatg
      781 gttcaaagct tactatttct tttcaacaaa caagtaatac tacatcaatc agtaaattgt
      841 acgtaaagaa tgaatttcat tccattacat atcccaaaaa tggtgatgat ttggaatttg
      901 aaatagattt agatgaagtt attcaagttt tcaaacaata cgatagagat aaagcttttg
      961 ttgttgttga agaaaatcaa gagatattaa cgacacaaaa aaatttaaaa gtgtttaata
     1021 acttttcaaa cgtacataaa ctacatcgct atagtgatgg cgtaaattca atttatccat
     1081 acatttcaaa aaacggattt ttacacctat catttactga caatattcca acaaaaactt
     1141 atctactcag acgtcatatc gatgacttaa tgattaataa cagttcatta tcaatctctg
     1201 gtaagttttc acttattaac tcaacaatgg aaactgcaaa tattgttatt acaactcgat
     1261 tatcgaatca tgagaaaaga attcctttta aaactgatag aattagtggc aatacaaaga
     1321 ctgaagttca tgaattttct gtagatatat acaatgagtt tatcgaattc atgcaatatc
     1381 catttgatct tgaggatatt atcgatatat acatcgacat ccatattcaa gaacttaaag
     1441 aatcaataaa agtaaaactt ggaaatccaa gaatcatggt cgaaagattt cttaaaggtg
     1501 aaattatctc tcactttgaa aatgaaataa tttccgctac tccttatttc actatgaagg
     1561 ggagaaattt atctttcaga gttaacagat att
//
LOCUS       DANHPA010000208         1581 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.214, whole genome shotgun sequence.
ACCESSION   DANHPA010000208 DANHPA010000000
VERSION     DANHPA010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1581)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1581)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.214"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..232)
                     /locus_tag="PTC28_002459"
     CDS             complement(<1..232)
                     /locus_tag="PTC28_002459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000394000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDK5717680.1"
                     /translation="MEFETFNLTDLYTISSGLSKNRKYFGTGTPFLTFKDVFDNLILP
                     NEFSGQVITEEKEREKYSVKKGDLFLTRTSEKQ"
     gene            complement(222..>1581)
                     /locus_tag="PTC28_002460"
     CDS             complement(222..>1581)
                     /locus_tag="PTC28_002460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017175164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HDK5717681.1"
                     /translation="DEYADEEDKDEYLAENIFWVPKEARWQYINDNSKKPEIGQIIDK
                     AMIAIERENESLKGVLPKDYARPALDKEKLGDIIDLFTFKVGDSESKKQDVLGRVYEY
                     FIAKFASAEGKNAGEFYTPASIVKLLVEMIEPYQGRIYDPCCGSGGMFVQSEHFIERH
                     QGRIGDIAVYGQESNPTTWKLAKMNLAIRGIDSDLGDHHADTFHNDLHKDLKADFILA
                     NPPFNASDWGQEKLLDDYRWKFGIPPKGNANYAWIEHMISKLAPSGTAGFVLANGSMS
                     TSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFVTKNKAKNGKNERRGEV
                     LFIDARNIGSMVSRTLKEFSDEEIKDIANVYHSWRGTSDNQYEDKAGFCKVAKTEEIK
                     DNEYILTPGRYVGLAEVEEDSEPFEQKMERITADLSEQFAKSKELEDQIRKSLEGLGY
                     GV"
BASE COUNT          452 a          322 c          205 g          602 t
ORIGIN      
        1 tttgtttctc actagttctt gttaaaaaaa ggtctccttt tttaactgaa tacttttctc
       61 tttctttttc ttcagttata acttgcccag aaaattcatt aggtaatatt aaattatcga
      121 atacatcttt aaatgttaaa aaaggtgtac cagtaccaaa atattttcta ttttttgata
      181 aacctgaact aatagtatat aaatcagtta aattaaatgt ctcaaactcc ataacctaat
      241 ccctccaatg acttacggat ttggtcctcg agttcttttg atttcgcaaa ttgttcactt
      301 aaatctgctg tgattctttc cattttctgt tcaaatggtt ctgaatcttc ttctacttct
      361 gctaagccta cataacgccc tggtgttaag atatattcgt tatcttttat ttcttctgtc
      421 tttgctactt tacagaatcc tgctttatct tcatattggt tatcgcttgt tccgcgccat
      481 gaatgataga catttgctat atcttttatt tcttcatctg agaattcttt taatgttctt
      541 gataccatac taccgatatt tctagcatct ataaatagta cttctccacg tcgttcattc
      601 ttaccgtttt tagctttatt ttttgtcacg aaccacaaac acactggaat ttgagttgaa
      661 tagaatagtt gccctggtaa tgtaactata cattcaacta agtcttgttc aattaagttt
      721 ttacgtattt ctaattcatc tttaccactt gtagacattg aaccattcgc taaaacaaat
      781 cctgctgtac cgcttggggc aagtttagaa atcatatgtt caatccatgc atagttggca
      841 ttgcctttag gaggaatacc aaatttccaa cgataatcat ctaataattt ttcttgtccc
      901 caatcgcttg cattgaatgg tgggttagcc aatataaaat cagctttcaa atctttatgt
      961 aaatcattat gaaatgtgtc tgcatgatga tcccctaaat cactatctat gcctcgaata
     1021 gccaaattca tttttgctaa tttccaagta gttggattag attcttgacc ataaacagca
     1081 atatcaccta tacgaccttg atggcgttca ataaaatgct cactttgtac aaacattcct
     1141 cctgagccac aacaagggtc ataaattcta ccttgatatg gttcaatcat ttcaacaagc
     1201 aatttaacta ttgaagctgg tgtatagaat tccccagcat ttttaccctc agcgctcgca
     1261 aattttgcaa taaagtattc ataaacacga cctaagacgt cttgtttttt actttcagaa
     1321 tccccaactt tgaatgtaaa taggtcaata atatcgccta atttttcttt atctaatgct
     1381 ggtcttgcgt aatctttagg caatacccct tttaaagact cattttctct ttcaattgct
     1441 atcattgctt tatcgataat ttgaccaatt tctggtttct tagaattatc gttaatatat
     1501 tgccaacgtg cttctttagg aacccagaaa atattctctg ctaaatactc atctttatcc
     1561 tcttcgtcag catattcatc a
//
LOCUS       DANHPA010000209         1575 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.215, whole genome shotgun sequence.
ACCESSION   DANHPA010000209 DANHPA010000000
VERSION     DANHPA010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1575
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.215"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            252..443
                     /locus_tag="PTC28_002461"
     CDS             252..443
                     /locus_tag="PTC28_002461"
                     /inference="COORDINATES: protein motif:HMM:NF013677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDK5717682.1"
                     /translation="MPIQTLTRWLCIYRKDGENGFVGSGKRTSKKQAETDLEKRLRDL
                     EEENKILKKAMHIFAKDQK"
     gene            491..904
                     /locus_tag="PTC28_002462"
     CDS             491..904
                     /locus_tag="PTC28_002462"
                     /inference="COORDINATES: protein motif:HMM:NF013483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HDK5717683.1"
                     /translation="MCRVLGVSRSGYYDWKNRKPSARVVKREGLKKHIYQIYIKSQKR
                     YGSPKITQLLRRHGHTVTQKTVSRLMKALGIRSITKKKYKATTHSKHHLPVYPNLLNQ
                     QFKVSQPGSVWVANITYGKRTCDVSFKQSVYNSRT"
     gene            846..1091
                     /locus_tag="PTC28_002463"
     CDS             846..1091
                     /locus_tag="PTC28_002463"
                     /inference="COORDINATES: protein motif:HMM:NF012870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HDK5717684.1"
                     /translation="MAKELVMSALNKAYTIQEPKEGLIHHSDQGSQYASIEYQKLPRE
                     KGIQSSMSRKGNCYDNACIALWNISLLFTIPKEYIQR"
BASE COUNT          600 a          224 c          304 g          447 t
ORIGIN      
        1 ttggacttat tattacatta gtatcaataa tttggttagt ttatgaagaa tattcaatta
       61 ataaaaaaat gtgatgctag actaagaaac ggacacggta aattgataag aatttaatgt
      121 ataatacaag aaatcaattg ataggagtgt cagtgatggc aagaagaaaa tacgaacata
      181 gctttaaaat ggaagtaatt caatgagtag aatcagggag acgtgcctca gaagtttcta
      241 gagacctaga tattcctatt caaacgttaa caagatggct gtgtatatac cgtaaagacg
      301 gtgaaaatgg ttttgtcggt agcggtaaac ggacgtcaaa gaagcaagca gaaacggatt
      361 tagaaaagcg attaagagat ttagaagaag agaataaaat attaaaaaaa gctatgcaca
      421 tctttgccaa agaccagaaa taatatacaa gtttatctat gaacactgac atgaattccg
      481 tgtcgtaaaa atgtgccgag ttctaggtgt ttcgagaagt ggttattatg attggaaaaa
      541 tcgtaagcca agtgcgcgcg tagtgaagcg tgaaggtttg aagaagcata tttatcaaat
      601 ctatattaaa agtcaaaagc gatacggaag cccgaaaatc acacaattac tgagacgtca
      661 tggccatact gtcacccaaa aaactgtcag tagattgatg aaggcacttg gtataaggtc
      721 tatcacaaaa aagaaataca aggcaacgac ccattcaaag catcatcttc ctgtataccc
      781 gaatttattg aaccaacagt ttaaagtatc gcaacctggc agcgtttggg tggcgaacat
      841 cacgtatggc aaaagaactt gtgatgtcag ctttaaacaa agcgtataca attcaagaac
      901 ctaaagaggg gttaattcat cactcagatc aaggaagtca atatgcctca atagaatatc
      961 aaaaattacc acgtgaaaaa gggattcaga gcagtatgag tcgtaaagga aactgttacg
     1021 acaacgcatg tatagcattg tggaatatat ccttactttt tacaattcca aaagagtaca
     1081 ttcaacgtta aataatatga gccccattga atttgagaag aaatacgcaa caaaatcacc
     1141 tagctcagaa tgtacttttt gattttcaaa aggacaagat gggctaggca agcaagcgaa
     1201 gcgcggtaga attctctttt tctgtgtccg gtttcttgac atagatccaa tgatattata
     1261 tgaatcaaat cagtataaat tttcagtaga aacttcaaga attttaattg tgtaaaagag
     1321 gttataattt tattaaatta tgtataattt aatctgttga ggattgaaaa agctgtgagt
     1381 attgaatcat atatagagag aagtgttaaa agaagcataa ctaacatgtg aggttagatt
     1441 ctattatcaa cataacatac tatcaatcta aatagctaac atgtgtttat tcttgtgtat
     1501 taaagaaaaa atatattccg atttctaatt attagcaatt aatttattag atagattttt
     1561 gaagcgattt taatg
//
LOCUS       DANHPA010000210         1565 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.216, whole genome shotgun sequence.
ACCESSION   DANHPA010000210 DANHPA010000000
VERSION     DANHPA010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.216"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..780
                     /gene="bla"
                     /locus_tag="PTC28_002464"
     CDS             <1..780
                     /gene="bla"
                     /locus_tag="PTC28_002464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000733274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class A beta-lactamase"
                     /protein_id="HDK5717685.1"
                     /translation="HAKELNDLEKKYNAHIGVYALDTKSGKEVKFNSDKRFAYASTSK
                     AINSAILLEQVPYNKLNKKVHINKDDIVAYSPILEKYVGKDITLKALIEASMTYSDNT
                     ANNKIIKEIGGIKKVKQRLKELGDKVTNPVRYEIELNYYSPKSKKDTSTPAAFGKTLN
                     KLIANGKLSKENKKFLLDLMLNNKSGDTLIKDGVPKDYKVADKSGQAITYASRNDVAF
                     VYPKGQSEPIVLVIFTNKDNKSDKPNDKLISETAKSVMKEF"
     gene            complement(1115..1543)
                     /locus_tag="PTC28_002465"
     CDS             complement(1115..1543)
                     /locus_tag="PTC28_002465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HDK5717686.1"
                     /translation="MILSHKDFLYQIEEDGTTVTIYKNNDTKTYTAIEATGELTPHHF
                     CVLNYIKVDLNQSETFEERFLSRTADLNDVHGFISLRVLRPWDPQNHYVVISLWDDRK
                     SFEVWQASEQPLNYHHQWNGALDEEIVNSDLSYYIKFDAQ"
BASE COUNT          593 a          221 c          232 g          519 t
ORIGIN      
        1 catgccaaag agttaaatga tttagaaaaa aaatataatg ctcatattgg tgtttatgct
       61 ttagatacta aaagtggtaa ggaagtaaaa tttaattcag ataagagatt tgcctatgct
      121 tcaacttcaa aagcgataaa tagtgctatt ttgttagaac aagtacctta taataagtta
      181 aataaaaaag tacatattaa caaagatgat atagttgctt attctcctat tttagaaaaa
      241 tatgtaggaa aagatatcac tttaaaagca cttattgagg cttcaatgac atatagtgat
      301 aatacagcaa acaataaaat tataaaagaa atcggtggaa tcaaaaaagt taaacaacgt
      361 ctaaaagaac taggagataa agtaacaaat ccagttagat atgagataga attaaattac
      421 tattcaccaa agagcaaaaa agatacttca acacctgctg ctttcggtaa gactttaaat
      481 aaacttatcg caaatggaaa attaagcaaa gaaaacaaaa aattcttact tgatttaatg
      541 ttaaataata aaagcggaga tactttaatt aaagacggtg ttccaaaaga ctataaggtt
      601 gctgataaaa gtggtcaagc aataacatat gcttctagaa atgatgttgc ttttgtttat
      661 cctaagggcc aatctgaacc tattgtttta gtcattttta cgaataaaga caataaaagt
      721 gataagccaa atgataagtt gataagtgaa accgccaaga gtgtaatgaa ggaattttaa
      781 tattctaaat gcataataaa tactgataac atcttatatt ttgtattata ttttgtatta
      841 tcgttgacat gtataatttt gatatcaaaa actgattttc cctctattat tttcgagatt
      901 tattttctta attctcttta acaaactaga aatattgtat atacaaaaaa ttataaataa
      961 tagatgaata gtttaattat aggtgttcat caatcgaaaa agcaacgtat cttatttaaa
     1021 gtgcgttgct tttttctcat ttataaggtt aaataattct catatatcaa gcaaagtgac
     1081 aggttattaa aattttgaaa aatcgctata cacatcattg tgcatcaaat ttaatataat
     1141 atgacaaatc ggaattcaca atctcttcat ctaatgcgcc attccattga tgatggtaat
     1201 tcaatggttg ctcagaagct tgccacactt caaaactttt acggtcatcc cataatgaaa
     1261 tcacaacata atgattttgt gggtcccagg gtctcaaaac acgtagcgat atgaagccat
     1321 gtacatcatt caaatctgct gtgcgactta gaaagcgttc ctcaaatgtt tcactttgat
     1381 tcagatctac tttaatataa tttaagacac aaaaatgatg cggtgtgagc tcgcctgtcg
     1441 cttctatagc agtatatgtt ttggtatcat tatttttata tatggtcact gttgtcccat
     1501 cttcttcaat ttgataaaga aaatctttat gagagagtat catgctttat acctccttat
     1561 actta
//
LOCUS       DANHPA010000211         1542 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.217, whole genome shotgun sequence.
ACCESSION   DANHPA010000211 DANHPA010000000
VERSION     DANHPA010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1542)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1542)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.217"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            107..583
                     /locus_tag="PTC28_002466"
     CDS             107..583
                     /locus_tag="PTC28_002466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717687.1"
                     /translation="MILLWFGIHRYINHDEKQLKSPSVILWAISMLLYFVAIVLYQTD
                     ALHLYERIHEIALVTVFGFIVAWTYSHLYRSIDTIVYTVMIVLFTLVIFATSGPSLLV
                     SDAITMMLVIRLILTAVFVGIGVHVVIKQLKTKNMENFPLLYFFAFGYWITIAYWL"
     gene            complement(747..1475)
                     /locus_tag="PTC28_002467"
     CDS             complement(747..1475)
                     /locus_tag="PTC28_002467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000717383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HDK5717688.1"
                     /translation="MKKLIATTSIATAGVAALTLAHGHDAQAAEYNGGYNPQDPTSYS
                     YSYTIDNQGNYHFTWEGNWSPERFNGGNASASYYTGYDATAGSSYTQPTRTYSAPSYT
                     TQTTSTSSSYSSRDYASSYTTTTTSTRSVSRGGSSANLYTVGQCTYYVFDRVGGTIGS
                     TWGNASNWASAAAAAGYTVNNRPSAGAILQTTQGAFGHVAYVESVGSDGSIRVSEMNY
                     GYGPGVVTSRTISASQAASYNYIH"
BASE COUNT          430 a          263 c          336 g          513 t
ORIGIN      
        1 gaaaatttta aataattgaa tcatatatgt tttagctaga tagaaaacgg ttatagtata
       61 aacatgaaga ggtgattcca tcttatactt aatagttcta gtagcgatga ttctattatg
      121 gtttgggatt caccgataca tcaatcacga tgaaaaacaa cttaaaagtc cttctgtaat
      181 attatgggct atcagcatgt tactgtattt tgtagcgatt gtactgtatc agactgatgc
      241 ccttcattta tatgagcgaa tccatgaaat tgcacttgtc acagtttttg gtttcattgt
      301 ggcttggact tattcacatc tttatcgctc tatagatact atcgtttata cagtgatgat
      361 tgtattgttc acacttgtta tttttgccac aagtggccca agcctgttgg tttctgatgc
      421 cataacgatg atgctcgtca tacgcttgat tttgacagca gtgtttgtag ggataggtgt
      481 acacgtcgtc attaagcaac tgaaaactaa aaacatggaa aacttcccat tactctattt
      541 ctttgcattt ggttattgga taacgattgc ttattggttg taaagcatga agtggtttaa
      601 agtgatgagt tggcatgtat ggcgagcgta gcgattttaa acttgtgaga ttgtaaaaga
      661 gaagtatgtg attcaactta aaaatacaca aaaaagaacc ctctgcatat caaaatgcgg
      721 agggtttaat atatgaaaga ttcatgttag tgaatgtagt tgtaagatgc tgcttggcta
      781 gctgagattg tacggcttgt tacaacacca ggaccgtaac cgtagttcat ttctgatacg
      841 cgaatagaac catcagaacc aacgctttca acgtatgcta cgtgaccgaa agcaccttga
      901 gttgtttgta aaatcgcgcc tgctgatggg cggttgttta cagtgtagcc tgctgcagct
      961 gctgcgcttg cccagttact tgcgttaccc caagttgaac cgattgtacc acctacacga
     1021 tcaaatacat aataagtaca ttgtcctaca gtgtataggt tcgcacttga tccacctctt
     1081 gatactgaac gtgtagacgt tgtagttgtt gtataagatg atgcataatc acgtgaactg
     1141 tatgagctag acgtacttgt agtttgtgtt gtgtaagatg gtgcgctgta agtacgtgtt
     1201 ggttgcgtgt atgaagaacc tgctgttgca tcgtaaccag tgtagtaaga agctgatgcg
     1261 ttaccaccgt taaagcgctc tggtgaccag ttaccttccc atgtgaagtg gtagtttcct
     1321 tgattgtcga ttgtgtaaga atagctataa gacgttgggt cttgtgggtt atatccaccg
     1381 ttgtattctg ctgcttgtgc atcgtgacca tgagctaatg ttaaagcagc aactcctgct
     1441 gtagcgattg aagttgtagc gattaatttt ttcattgtaa aaaatcctcc tagataattt
     1501 gttcaagatt ataaagtaat tcactaaagt gtgatttgat tt
//
LOCUS       DANHPA010000212         1533 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.218, whole genome shotgun sequence.
ACCESSION   DANHPA010000212 DANHPA010000000
VERSION     DANHPA010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.218"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(137..1057)
                     /locus_tag="PTC28_002468"
     CDS             complement(137..1057)
                     /locus_tag="PTC28_002468"
                     /inference="COORDINATES: protein motif:HMM:NF033831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sce7725 family protein"
                     /protein_id="HDK5717689.1"
                     /translation="MYYPYLRGKQYELIAVRELIEKKLISKNVVPIIEPIKETATLRS
                     TLETGIENNHQIYTIINPQVGEYSLYEENHPITGEVLDLNYDAILMNNAKDVSKNAHL
                     LSKSEKFIAIYSSRDDLKNFAMLKEKSLVPSINFVKDGHRFSRFFRQEHQEIGLIRDA
                     FDKQKRNVDYADESDKFFSDDHLYYRDEGYVAFSDYSIVGDHYLDNGFAPVAVAIHIV
                     YFDSNDVLRIKHFVSESNDDNSDPAGKFREALEKLINWAETTTTLNHSDALKQFQVLW
                     NEKRYPGLGFTKKLSIMHHLEIMDNYLSRR"
     gene            complement(1032..>1533)
                     /locus_tag="PTC28_002469"
     CDS             complement(1032..>1533)
                     /locus_tag="PTC28_002469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019167917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sce7726 family protein"
                     /protein_id="HDK5717690.1"
                     /translation="IMDYYTVFDHVEIIVDEAHLNKVKSRYLNTSVGISVLSKKNTIS
                     QKQRPSPNRQWLNHIAIYKVLRKEERKSIIKMFYGYSPEFDQFSEYQALLKMFQKIEI
                     EPLYEQFIQLLKQRDTVKAYQNDFKNVPYELRFITYFSQFRKNDYHNLNIALGGGKDV
                     LSISKR"
BASE COUNT          483 a          284 c          203 g          563 t
ORIGIN      
        1 gtatcatttt caatttcaac tgtatgaacg tctgtgtgat ttctattaat atcacagtga
       61 ccaactgtac caaacgattt gataatggct tgaatttcaa tattagaaaa acattcttca
      121 caaaatttca atgacttcac cttctactca aataattgtc cataatttct aagtgatgca
      181 taattgacaa cttctttgta aaacctaatc caggatacct tttttcattc cacaacactt
      241 gaaattgttt caaagcatct gaatggttta atgttgttgt tgtctccgcc caattgatta
      301 atttttcaag tgcttctcga aattttccgg ctggatctga attatcatcg tttgattctg
      361 aaacaaaatg cttaattctc aaaacatcat ttgaatcaaa ataaacgatg tgtatcgcaa
      421 ctgcaacagg tgcaaaacca ttatctaaat aatgatcacc tacaatcgaa taatctgaga
      481 atgcaacata gccctcgtct ctatagtaca aatgatcatc agagaaaaat ttgtctgact
      541 catctgcata atcaacattc cttttttgtt tgtcaaatgc atctctaatt aaccctattt
      601 cttggtgctc ttgtctaaaa aaacgactaa agcgatgacc gtctttcaca aaattaatac
      661 ttggcactaa gcttttttct ttaagcatcg caaaattttt aagatcatct cttgaagaat
      721 aaatggcaat aaatttttca cttttcgaaa gcaaatgcgc gtttttcgat acatctttag
      781 cattgttcat taaaatcgca tcataattaa gatccaaaac ctcacctgta ataggatgat
      841 tttcttcata caagctatac tcccctactt gaggattgat aatcgtataa atctgatggt
      901 tattttcaat tccggtttct aatgttgatc ttaaagtcgc agtttcttta ataggttcta
      961 taattggaac aacatttttg ctgattaact ttttttcaat taattcacgt actgcgatta
     1021 attcatactg cttacctctt agatatggat aatacatctt tacctcctcc taatgcgata
     1081 tttaaattgt ggtaatcatt tttcctgaat tgactaaaat acgttataaa tctgagttca
     1141 taaggtacat tcttaaaatc attttgataa gctttaactg tgtctctttg cttcaataac
     1201 tgaatgaact gttcgtacaa aggttctatt tcaattttct ggaacatttt taataacgct
     1261 tgatactcag aaaactgatc aaattcagga ctgtagccat aaaacatttt aataattgat
     1321 tttctttctt ctttccttaa cactttgtaa atcgcgatat gatttaacca ttggcgattt
     1381 gggctaggcc tctgtttttg actaatcgta tttttcttag acaacacaga aattccaacc
     1441 gacgtattta agtagcgtga ctttacttta ttgagatgtg cttcatctac aatgatttcg
     1501 acatggtcaa acactgtata ataatccata att
//
LOCUS       DANHPA010000213         1532 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.219, whole genome shotgun sequence.
ACCESSION   DANHPA010000213 DANHPA010000000
VERSION     DANHPA010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.219"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            105..1157
                     /locus_tag="PTC28_002470"
     CDS             105..1157
                     /locus_tag="PTC28_002470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDK5717691.1"
                     /translation="MKIELGLTSFADNQDMHTENGVLPAISNGERIRNVVEEIKLADE
                     VGLDVYGLGEHHRPDYAVSSPTTVLAAAAAVTKNIKLSSAVTVLSSDDPIRVYQQFAT
                     IDALSDGRAEIMAGRGSFIESFPLFGYDLKNYEQLFDEKLELLLKINQNTIIHWEGAL
                     TPNIDGRGVYPRAVQKELPVWLATGGTPESSLKAGSLGLPITYAIIGGDPKRFRRNIA
                     MYKAVAESNGHNGDTLQVASHSWGYVADTDEQAQREFYPSVEAHHNVLAKERGWPPFS
                     NEHFQREIGPNGAMYVGSPETVAQKIIDTIEALGITRFMLHLPLGSMPHERTMHAIRL
                     FGEKVKPIVDSYFENK"
     gene            1171..1524
                     /locus_tag="PTC28_002471"
     CDS             1171..1524
                     /locus_tag="PTC28_002471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDK5717692.1"
                     /translation="MILRYVTNLKVAKQLYDAAQPKLKGDQGMKDAFKMFNLPESMVK
                     VIGITEAVAAGLFAISIFDKRLSQVASVLTLGVLVGAIYKHIEAGQGKEGAQHAIDVA
                     SLAGLSLVDNLVNKK"
BASE COUNT          512 a          246 c          325 g          449 t
ORIGIN      
        1 gcgtgtacgc tataaattga aatcggaatc tttcttattg acaaatcgta taagagaggg
       61 atataatctt agtataattt ttatacttga aaggtggtgt tgagatgaaa attgaattag
      121 ggttgacatc ttttgcagat aaccaagata tgcatacaga aaatggtgta ttaccagcaa
      181 tttcaaacgg agaacgtatt cgtaatgttg ttgaagaaat taaattagca gatgaagtag
      241 gcctagacgt ctatggatta ggggaacatc accgccctga ctacgctgta tctagcccaa
      301 caacagtgct tgcggcagca gcggctgtaa ctaaaaacat taaattgtca tctgcagtaa
      361 cggttttatc atcagatgat ccaatccgtg tgtatcaaca atttgcgaca attgatgcat
      421 tatctgatgg acgtgcagaa attatggcag gtcgtggttc atttattgaa tctttcccat
      481 tatttggtta cgaccttaaa aactacgaac aactttttga tgaaaaatta gagctattat
      541 tgaaaattaa tcaaaatacg attatacact gggaaggtgc attgacacca aatattgatg
      601 gacgtggtgt atatccacgt gcggtacaaa aagaattacc agtgtggtta gcaacaggcg
      661 gcacacctga gtcatcatta aaagcaggat ctttaggttt accgattact tatgcgataa
      721 taggtggtga cccaaaaaga tttagacgta atattgcgat gtacaaagct gttgctgaat
      781 caaatggtca taatggtgac acacttcaag ttgcttctca ttcttggggt tacgttgcag
      841 atacggatga acaagcgcaa cgtgagtttt atcctagtgt agaagcacat cataatgtat
      901 tggctaaaga aagaggttgg ccaccattct ctaatgagca tttccaaaga gagattggtc
      961 caaatggtgc gatgtacgtt ggtagtccag aaacagtcgc acaaaaaatt attgatacca
     1021 tcgaggcatt aggtattaca cgatttatgt tacacttacc attaggttct atgccacatg
     1081 aaagaacaat gcatgcaatt agactttttg gggaaaaggt aaaacctatc gtcgattcat
     1141 attttgaaaa caaataggag gaatttagaa atgattttac gttacgttac aaacttaaag
     1201 gtagcaaagc aattatatga tgcagctcaa ccaaaattga aaggtgacca aggtatgaag
     1261 gacgctttta aaatgttcaa cttacctgaa agtatggtta aagtgattgg aattactgaa
     1321 gctgttgctg ctggtctttt cgctattagt atttttgaca aacgtttatc acaagttgct
     1381 tcagtgttaa cacttggtgt attagtaggt gcaatttaca aacacattga agcaggtcaa
     1441 ggtaaagaag gtgcacaaca cgcaatcgac gtggcatctt tagcagggtt aagcttagtt
     1501 gacaacttag ttaacaaaaa ataattacaa ta
//
LOCUS       DANHPA010000214         1496 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.220, whole genome shotgun sequence.
ACCESSION   DANHPA010000214 DANHPA010000000
VERSION     DANHPA010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1496)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1496)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1496
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.220"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            61..678
                     /locus_tag="PTC28_002472"
     CDS             61..678
                     /locus_tag="PTC28_002472"
                     /inference="COORDINATES: protein motif:HMM:NF016988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDK5717693.1"
                     /translation="MDLDVEEVKKMRKSRIILAKTKADASGRMGNANVDFIYKQYDVA
                     GVEAYKKRIQKDIHKFTNTPDLSDENFGGVQSGEAMKYKLFGLEQLRSTIERQLTKGF
                     KRRFAIIQSVRNQLNDPIDLSHMRIEYKPNIPQSLSEYADIFIKLGGRVSQETLLSWL
                     PNIENPKEELEKVKAEEQEASENHDYHDAMTVQQEKADINNVELE"
     gene            662..>1496
                     /locus_tag="PTC28_002473"
     CDS             662..>1496
                     /locus_tag="PTC28_002473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
                     /protein_id="HDK5717694.1"
                     /translation="MSNLSDYWLERAQQAIQSETLEDAAKVAEIERIVAMMIADIYKN
                     LLAYYGKLATAEGIDWREAKQIADKFDVEAFQMRAKVYVENKDFSDKANKELKRYNTA
                     MYANRENLLKHELGLIVTKAYAEQENVINKHLHDSVTRTLEHQSGILGADVHVKPTDV
                     EAIVYSNFGKLNWSERLWNNQDELRKDVERMASHVMLRGRHPYEFVPEIRKKQKQTVA
                     NTKSLLITEAARVQTEAQKLHYLETIGKDAEYEFVAKRDEKTSKICRHYDKKVFKVKD
                     MV"
BASE COUNT          506 a          242 c          385 g          363 t
ORIGIN      
        1 acagaaacag ataacactgg agaaaataat aattagactg aaaaaataaa gacagggcat
       61 ttggacttag atgttgaaga agtgaaaaag atgcgtaagt cacgtatcat cctcgctaag
      121 acaaaagcgg atgcatcagg gcgtatgggt aatgcgaatg tggattttat ttacaagcaa
      181 tatgatgttg cgggtgttga agcgtataag aaacgtattc aaaaagacat ccataagttt
      241 acgaatacac ctgatttatc agatgagaac tttggcggtg tgcagtcagg tgaggcgatg
      301 aaatacaagt tgtttgggct cgaacagtta cgctcgacaa tcgaaaggca gttgacgaaa
      361 ggttttaaac gtcgatttgc gattattcag agtgtgcgaa atcaactgaa cgacccgatt
      421 gatttgtcgc atatgcgtat tgaatataag ccgaatatcc cacaatcgtt gtctgagtat
      481 gcggacatct ttattaaact tggtggacgt gtcagtcaag agacgttgtt atcgtggtta
      541 ccgaatatcg agaacccgaa agaagaactt gaaaaagtga aagcggagga acaagaggcc
      601 tcagaaaatc acgactacca cgacgccatg actgtgcaac aagagaaagc ggatataaac
      661 aatgtcgaac ttgagtgatt actggttaga gcgggcacaa caagcgatac aatctgagac
      721 gcttgaggat gctgcgaaag tggctgaaat tgagcgcatt gtggcgatga tgattgcgga
      781 catctacaaa aacttattag cttattatgg caagcttgcg acggctgaag ggattgattg
      841 gcgagaagca aagcaaatcg cggataagtt tgatgttgaa gcgttccaaa tgcgagctaa
      901 ggtctatgta gagaataaag attttagtga taaggcgaat aaagagctta aacgctacaa
      961 tacagcgatg tatgcgaatc gtgaaaattt gttaaagcat gagctcggtt tgattgtgac
     1021 gaaagcctat gcagaacaag agaacgtgat taacaaacat ctccatgaca gtgtgacgcg
     1081 tacgcttgag catcaatcag gtattttagg tgcggatgtg catgtgaagc cgacagatgt
     1141 tgaagcgatt gtgtactcta actttggcaa gctgaattgg tctgagcgac tttggaacaa
     1201 tcaagatgaa ctcagaaaag atgttgagcg gatggcaagc catgtgatgt tacgtggccg
     1261 acatccgtat gagtttgtgc cagagatacg caagaaacag aagcagacag tcgctaatac
     1321 gaaaagctta ttgattaccg aagctgcacg cgttcaaaca gaagcgcaga aattgcatta
     1381 tttagagacg ataggaaaag atgctgaata tgagtttgtg gccaaacgtg atgaaaagac
     1441 gtctaaaatc tgtcgtcatt atgataaaaa agtttttaaa gtgaaagaca tggtgc
//
LOCUS       DANHPA010000215         1495 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.221, whole genome shotgun sequence.
ACCESSION   DANHPA010000215 DANHPA010000000
VERSION     DANHPA010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1495
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.221"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            6..1436
                     /gene="spa"
                     /locus_tag="PTC28_002474"
     CDS             6..1436
                     /gene="spa"
                     /locus_tag="PTC28_002474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_075773664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="staphylococcal protein A"
                     /protein_id="HDK5717695.1"
                     /translation="MENKNFFSIRKLSIGVGSCLIASSLLVNTPSFAEEGDNNAEAQQ
                     NAFSEVVKLPNLSEEQRNGFIQSLKDDPSTSQDVLNEAKKLNDSQEGSQPAPDYSDEQ
                     QNAFYEILHLPNLTEEQRNGYIQSLKDDPSVSANILVEAKNMNVNQTPTQPAPSFDEA
                     QQNAFYEIVNLPNLTEEQRNGFIQSLKDDPSVSKDILVEAKKLNDSQAKPDYSEAQQN
                     AFYEILHLPNLTEEQRNGFIQSLKDDPSVSKDILVEAKKLNDSQAKPDYSEAQQNAFY
                     EILHLPNLTEEQRNGFIQSLKDDPSVSSDILAEAKKLNDSQAPKEDKAEDKGSKEDKA
                     EDKGSKEDKAEDKGSKEDKAKDKDNKEGKAADKGMDKAKDAMHVVQPGETVEKIAKAN
                     NTTVEQIAKDNHLEDKNMILPGQKLVVDNQKAMKDSKEAKANHEMKALPETGEENDMA
                     LFGTSLTGGLSLALGLYILGRGRKTN"
BASE COUNT          618 a          265 c          271 g          341 t
ORIGIN      
        1 aatcaatgga aaacaaaaac tttttcagca ttcgtaaatt atcaattggg gtgggttcat
       61 gtttaatcgc gagctcttta cttgtgaata caccaagttt cgcagaagaa ggagataata
      121 acgcagaagc gcaacaaaac gctttctctg aggtagtaaa attacctaac cttagcgaag
      181 aacaacgtaa tggtttcatt caaagcctta aagatgatcc aagtacaagt caagatgtgc
      241 ttaatgaagc taaaaaatta aatgatagtc aagagggatc tcaacctgct cctgattaca
      301 gtgatgaaca acaaaatgca ttttatgaaa ttttacacct tccaaactta actgaagaac
      361 aacgcaatgg ctatattcaa agtcttaaag atgacccaag tgtaagcgct aatattcttg
      421 ttgaagctaa aaatatgaat gttaaccaaa cacctacaca acctgcgcca agtttcgatg
      481 aagcgcaaca aaatgcattc tatgagattg taaacttacc aaatcttact gaagagcaac
      541 gtaacggttt catccaaagc cttaaagacg atccaagtgt aagtaaagat atccttgttg
      601 aagctaaaaa gttaaatgac agccaagcaa aacctgatta cagtgaagcg caacaaaatg
      661 cattttatga aattttacac cttccaaact taactgaaga acaacgtaac ggtttcatcc
      721 aaagccttaa agacgatcca agtgtaagta aagatatcct tgttgaagct aaaaagttaa
      781 atgacagcca agcaaaacct gattacagtg aagcgcaaca aaatgcattt tatgaaattt
      841 tacaccttcc aaacttaact gaagaacaac gtaacggttt catccaaagc cttaaagacg
      901 atccgagtgt aagtagtgat attcttgctg aagctaagaa attaaatgac agccaagcgc
      961 ctaaagaaga caaagctgaa gataaaggca gcaaagaaga caaagctgaa gataaaggca
     1021 gcaaagaaga caaagctgaa gataaaggca gcaaagaaga taaagctaaa gacaaagaca
     1081 acaaagaagg caaagctgca gacaaaggta tggacaaagc gaaagatgca atgcatgtcg
     1141 ttcaacctgg tgaaacagta gaaaaaattg ctaaagctaa taacacaact gtagaacaaa
     1201 tcgctaaaga taatcattta gaagataaaa acatgatttt accaggtcaa aaacttgttg
     1261 ttgacaacca aaaagcaatg aaagacagca aagaagctaa agcaaaccac gaaatgaaag
     1321 ctttacctga aacaggtgaa gaaaacgata tggcattatt cggtacatca cttacaggtg
     1381 gtcttagctt agcattaggt ttatacatct taggacgtgg cagaaaaaca aactaagatg
     1441 agaccacaaa ctgtaaaaga acagtgttaa catctttata aatcatatta aaaaa
//
LOCUS       DANHPA010000216         1424 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.222, whole genome shotgun sequence.
ACCESSION   DANHPA010000216 DANHPA010000000
VERSION     DANHPA010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1424)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1424)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1424
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.222"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            126..1217
                     /locus_tag="PTC28_002475"
     CDS             126..1217
                     /locus_tag="PTC28_002475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-deoxy-7-phosphoheptulonate
                     synthase/chorismate mutase"
                     /protein_id="HDK5717696.1"
                     /translation="MTSKLETYRKQIEDINDQILDLLSKRGELAQKIGEEKRKQSTVI
                     YDPQREKEMLNTLIDKNQGPFNDNVIKQLFKEIFKASTDLQKSDNEKHLYVSRKLKPE
                     DTIVHFDNGGIIGEGQKSFVFGPCSVESYDQIDAVAKDLKAKGEKFIRGGAFKPRTSP
                     YDFQGLGEEGLKILKQMKDKYDLNVVSEIVHPNDFELADQYLDVFQIGARNMQNFELL
                     KEAGRTRKPILLKRGLSATIEEFVYAAEYIASEGNQNIILCERGIRTYEKATRNTLDI
                     SAVPILKQGTHLPVMVDVTHSTGRKDIMLPAAKAALAVGADGVMAEVHPEPAVALSDS
                     GQQMDLNEFNEFYNVIKPLADMYNEKKLK"
BASE COUNT          522 a          222 c          274 g          406 t
ORIGIN      
        1 aatattttaa ccaaattaag cgtaaaaggt tgaaaatgct acatattatt gttagtatac
       61 tcaatatcta cttttaaatt ttactgcttt aaagcaagtt agaaaaatgg ttggggtgaa
      121 aaatgatgac aagtaaatta gaaacgtaca gaaaacagat tgaagacatt aatgatcaaa
      181 ttttggactt attatcaaaa cgaggcgagt tagcacaaaa aatcggtgag gaaaaacgca
      241 aacaaagcac tgtaatttat gatcctcaac gtgaaaaaga aatgctcaac acgctgattg
      301 ataaaaacca aggcccattt aatgataatg taattaaaca actgtttaaa gaaattttta
      361 aagcctcaac agatttacaa aaatcagata atgaaaaaca tttgtatgtc tcacgtaagt
      421 taaaacctga ggatacgatt gtacattttg ataatggtgg tattattggt gaaggccaaa
      481 aatcgtttgt cttcggtcca tgttcggttg aatcttatga ccaaatcgat gcagtggcta
      541 aagacttgaa agcgaaaggc gaaaaattta tccgtggcgg cgcattcaaa ccgcgtacat
      601 caccgtatga cttccagggc ctcggtgaag aaggattaaa aatacttaaa caaatgaaag
      661 ataaatatga ccttaatgtt gtcagtgaaa ttgttcatcc aaacgatttt gagcttgctg
      721 atcaatactt ggatgttttc caaattggtg cgcgtaacat gcaaaacttc gaattattaa
      781 aagaagcagg tcgtacacgt aaaccaattt tattaaaacg aggcttgtct gcaacgattg
      841 aagagtttgt atacgctgca gaatacattg catcagaagg aaaccaaaat attattttat
      901 gtgaacgtgg tattcgaaca tacgaaaaag caacacgtaa cacattagat atttcagcag
      961 tgccaatctt gaaacaaggt acgcatttac cagtcatggt tgatgtgacg cacagcacag
     1021 gtcgcaaaga cattatgtta ccagcagcga aagcagcact tgcagtaggg gctgacggcg
     1081 taatggcaga agtacatcca gaacctgcag ttgctttaag tgatagtggt caacaaatgg
     1141 acttaaacga gttcaatgaa ttctacaatg tgatcaaacc tttagctgat atgtacaatg
     1201 agaaaaaatt gaaataatag gttgattgaa aaaagggcaa aatcctacaa tgtgcgtagg
     1261 agcttgtcct ttttatttgt ctattgatat gtataaaaga aatcgtgaca tttgattaag
     1321 tgctttaaat taaagttttt ctatgtgtaa aattgcagtg atatgatttc caatcgtacg
     1381 accttctgtt tacaaacatc atatcatcaa atatggatat catt
//
LOCUS       DANHPA010000217         1355 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.223, whole genome shotgun sequence.
ACCESSION   DANHPA010000217 DANHPA010000000
VERSION     DANHPA010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1355)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1355)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1355
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.223"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            141..>1355
                     /locus_tag="PTC28_002476"
     CDS             141..>1355
                     /locus_tag="PTC28_002476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HDK5717697.1"
                     /translation="MKLTTVGLGYIGLPTSIMFAKHGVDVIGVDINEEAVKSLNDGHI
                     HIEEPGLQEAYEEVLATGKFKASQTPEEADAFIIAVPTPNNDDQYESCDISIVMSATK
                     SIIPYLKKGNTVIVESTIAPRTMDDHVKPLLEEHGFTIGEDLYLVHCPERVLPGKILE
                     ELIHNNRIIGGITPACIEAGKRVYSTFVKGEMIETNARTAEMSKLMENTYRDLNIALA
                     NELAKISIHLNINVLDVIEMANKHPRVNIHLPGPGVGGHCLAVDPYFIIAKDPENSPL
                     IQTGRRINRSMPAYVVETTKNMLRELTGNKIVVFGLTYKGDVDDIRESPAFDIYELLR
                     QESNLEVVTYDPHVELDFVEKDIQKAVADASLVLILSDHSEFKQLTDSDFVNMKDKVI
                     FDTKNVIRNQFES"
BASE COUNT          481 a          194 c          274 g          406 t
ORIGIN      
        1 tttgtatttt taattgaaat taatcttcat atacttaaaa attaaaatag aaataacgtt
       61 caattgactg agatgtcatt gtgaataagt tgataaatga aacactcaaa acaatttcta
      121 tggaagaaag gtgtatgaaa gtgaaactta caactgtagg attaggatac attggtttac
      181 ccacatcaat tatgtttgcg aaacatggtg tagatgtgat tggtgtagat attaacgaag
      241 aagctgttaa aagtttaaat gatggacata ttcacatcga agaaccaggt ttacaagaag
      301 cttatgaaga agtattagct acggggaaat ttaaagcatc acaaacacca gaagaggcag
      361 acgcgtttat tatcgcagtg ccaacaccga ataatgatga ccaatatgag tcttgtgata
      421 tttcaattgt catgagtgca acaaaaagca tcattcctta tttgaaaaaa gggaatactg
      481 tgattgttga atcaacaata gcaccgagaa cgatggatga ccatgttaaa ccgttattag
      541 aagaacacgg atttacaatt ggagaagatt tataccttgt tcattgtccc gaacgcgtac
      601 taccggggaa aatattagaa gaattaattc ataataatcg aattattggt ggaatcacac
      661 cagcgtgtat cgaagcaggg aagcgtgttt atagtacatt tgtcaaaggc gaaatgattg
      721 aaacaaacgc gcgtactgct gaaatgagta aattgatgga aaatacctac cgtgatttaa
      781 atattgctct agcgaatgaa ttagctaaaa tcagtattca tttaaatatt aatgtattag
      841 atgtcatcga aatggcaaat aaacatccac gtgtgaacat tcatttgcca ggaccaggcg
      901 taggaggaca ttgtttagct gttgatccgt atttcatcat tgcgaaggat cctgaaaatt
      961 ctccgttgat acaaacaggg cgtcgaatta atcgttccat gccagcttat gtcgttgaga
     1021 caaccaaaaa tatgttgcgc gaattaactg gcaataagat tgtggttttt ggtttaacgt
     1081 acaaaggaga tgtggatgat atccgagaat cacctgcttt tgatatttat gaattacttc
     1141 gtcaagaatc gaatcttgag gtggtaacat atgaccctca tgttgaatta gattttgtag
     1201 agaaagatat tcaaaaagca gtggctgatg cttcgttagt tttaatttta agtgatcatt
     1261 cagagtttaa acaactgact gacagcgatt ttgtaaatat gaaagataaa gtgatttttg
     1321 atacaaaaaa tgtgattcga aatcaatttg aatca
//
LOCUS       DANHPA010000218         1350 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.224, whole genome shotgun sequence.
ACCESSION   DANHPA010000218 DANHPA010000000
VERSION     DANHPA010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1350)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1350)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.224"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..1350
                     /locus_tag="PTC28_002477"
     CDS             <1..1350
                     /locus_tag="PTC28_002477"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HDK5717698.1"
                     /translation="KVSKFGGSSVASAEQIKKVLNIVNSDSERRIIIVSAPGKRYSDD
                     VKTTDLLIRLYEKVINQLDYTHKKQEILNRFKDIIDELPLETDILTEIDRTLESHIAT
                     LKDTPERLLDALKSSGENFNAQIIAAYNNEQGIPTIYLSPQDAGIIVTDDPGNAQILE
                     SSYDKIKEIRNTDKKIIIPGFFGYSETEHIVTFPRGGSDITGAIVARGVKADLYENFT
                     DVSGIFRANPSVIKHPEVIHKITYREMRELSYAGFGVFHDEALQPLYRYRIPVVIKNT
                     NRPSDKGTYIVHDREINHDKVVSGISCDKGFTSINIKKYLMNRQVGFTVKVLEILAKY
                     NISFDHMPSGIDNISIIMRSNQLAGKEQKVLEEIRHYCQIDELNVEHDLAILMIVGEG
                     MSSTVGTANKITDALAQANINLKMMNQGSSEISMMFGISTKDAEAAVKACYEHCYKR"
BASE COUNT          474 a          237 c          254 g          385 t
ORIGIN      
        1 aaagtatcaa aatttggagg cagttcagtc gcatcagctg aacaaattaa aaaagtttta
       61 aatatcgtaa acagcgattc tgaaagacgt attattatcg tatccgcacc tggtaaacgc
      121 tatagtgatg atgtcaagac aaccgatcta ctcattaggt tgtatgaaaa agtgattaac
      181 caactcgatt atacacataa aaaacaagag atccttaatc gcttcaaaga tattattgat
      241 gaattaccat tagaaacaga tattctcact gagattgatc gtacactcga atcacacatt
      301 gcaactttaa aagatacacc tgaacgtttg ctcgatgcgt taaaatcatc aggtgaaaac
      361 tttaatgcac aaatcattgc tgcatacaat aacgaacaag ggatcccgac gatatactta
      421 tcaccacaag atgcgggcat cattgtaacg gatgatccag gcaacgcaca aattttagaa
      481 tcgagttacg ataaaattaa agaaattaga aatacagaca aaaaaattat tattccgggc
      541 ttttttggct attcagaaac ggagcatatc gtgacattcc cgcgaggtgg ctctgatatt
      601 acaggtgcaa ttgtcgcaag gggtgttaaa gcggatttat atgaaaactt tacggatgta
      661 tcaggtattt tccgcgccaa tccatcagtt attaaacatc ctgaagtcat tcacaaaatt
      721 acttatcgcg aaatgcgtga attgtcttac gctggctttg gcgtatttca tgacgaggca
      781 ttacaaccgc tatatcgcta tcgtatccct gtcgtcatta aaaatacgaa tcgcccaagt
      841 gataaaggga catatattgt gcacgaccgt gaaatcaacc atgacaaagt cgtgtcaggt
      901 attagttgtg acaaaggctt tacaagtatt aacattaaaa agtatttgat gaatagacaa
      961 gtcggtttta cagttaaagt tttggaaata ttggcaaagt ataacatttc atttgaccat
     1021 atgccatctg gaattgataa tatcagtatt attatgcgct cgaatcaact tgctggcaaa
     1081 gaacaaaaag ttttagagga aattcgccat tattgtcaaa ttgacgaatt gaatgttgaa
     1141 catgacttag caatattaat gatcgtcggt gaaggtatga gttctacagt cggtactgcc
     1201 aataaaatta ccgacgcttt agcacaagcc aatattaatt taaaaatgat gaaccaaggt
     1261 tcttccgaaa tttcgatgat gttcgggatt tcaacaaaag atgctgaagc agctgtaaaa
     1321 gcgtgttatg aacattgtta caaacgttaa
//
LOCUS       DANHPA010000219         1337 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.225, whole genome shotgun sequence.
ACCESSION   DANHPA010000219 DANHPA010000000
VERSION     DANHPA010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1337)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1337)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1337
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.225"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            63..>1337
                     /locus_tag="PTC28_002478"
     CDS             63..>1337
                     /locus_tag="PTC28_002478"
                     /inference="COORDINATES: protein motif:HMM:NF012948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HDK5717699.1"
                     /translation="MKVTYPDGSIDEITTRIVVEQDETDADADADADADADADADADA
                     DADADADADADADADADADADADADADADADADADADADADADADADADADADADADA
                     DADADADADADADADADADADADADADADADADADADADADADADADADADADADADA
                     DADADADADADADADADADADADADADADADADADADADADADADADADADADADADA
                     DADADADADADADADADADADADADADADADADADADADADADADADADADADADADA
                     DADADADADADADADADADADADADADADADADADADADADADADADADADADADADA
                     DADADADADADADADADADADADADADADADADADADANKGDSNLTKKDAKQSLPETG
                     VTTNAAPLAGTLLAGLGSLFLYRRKNNKDNKDK"
BASE COUNT          370 a          340 c          429 g          198 t
ORIGIN      
        1 atggaacagt gacagtaacg ccaccggcgg atgcgacacc aggaacatca gtagatattc
       61 cagtgaaggt aacatatcca gatggatcaa ttgatgaaat tacaacgaga atcgttgtag
      121 aacaagatga aacagatgca gacgcagacg cagacgccga cgccgacgcc gatgcggatg
      181 ccgacgccga tgcagatgca gatgccgacg ccgatgccga cgcagatgcg gatgccgatg
      241 cggatgccga tgccgacgca gatgcggatg ccgatgcgga tgccgacgcc gatgctgatg
      301 cggatgccga tgcggatgct gacgcggatg cggatgcgga tgccgacgct gacgctgatg
      361 cagatgccga cgccgatgca gacgccgacg cagatgcgga tgccgacgca gatgccgatg
      421 cagatgcaga tgcagatgca gacgccgatg ccgacgctga tgcggacgct gatgcagatg
      481 cagatgccga tgcagacgca gatgccgacg cagatgctga tgccgacgcc gatgcggatg
      541 ccgacgccga tgccgatgca gatgctgacg ccgatgcaga cgccgacgca gatgcggatg
      601 ccgacgcaga tgccgatgca gacgccgatg ccgacgcaga tgcggacgct gatgccgatg
      661 cggatgccga tgccgacgca gatgcagatg cagatgctga tgccgatgcc gatgcagatg
      721 ccgacgcaga tgcagatgca gatgcagatg ccgacgccga tgcggacgct gatgccgatg
      781 cagacgccga tgcggatgca gacgcagatg cagatgcaga tgcagatgca gatgcagacg
      841 ccgatgcaga tgcagatgca gacgccgatg cggatgccga cgcagatgca gatgcagatg
      901 cagacgccga tgctgatgcc gatgcagacg cagatgcaga tgcagatgca gatgcagatg
      961 ccgatgcaga tgcagatgcc gatgccgacg cagatgcaga tgcagatgca gacgccgatg
     1021 ctgatgccga tgcagacgca gatgcagatg cagatgcaga tgcagatgca gatgccgatg
     1081 cagacgcaga cgcagatgca gatgcagacg ccgatgcgga tgctgatgct gatgccgacg
     1141 ccgatgcaga cgcggatgcc gatgcggatg ccgacgcaaa taaaggtgac tcaaatctta
     1201 cgaagaaaga tgcaaaacaa tcattaccag aaacgggtgt aacaacaaat gcagcaccgc
     1261 ttgcaggtac acttttagct ggtctaggtt cactcttctt atatagaaga aaaaataata
     1321 aagacaacaa agataaa
//
LOCUS       DANHPA010000220         1333 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.226, whole genome shotgun sequence.
ACCESSION   DANHPA010000220 DANHPA010000000
VERSION     DANHPA010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1333)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1333)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.226"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(333..>1333)
                     /locus_tag="PTC28_002479"
     CDS             complement(333..>1333)
                     /locus_tag="PTC28_002479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDK5717700.1"
                     /translation="IIIIQSIILPLLLSGFLFYICLPFQKMLEKRHLPRWASITIILL
                     ALTAMMAAVIGVIGPVIATQIENLIHQIPFIQREAERLINFALDQRDRLPDQVTEKIN
                     DIVSYFSQMASDLLSNSLNIISSIVSTLFLLILVPFFLIYMLKDHERFIPAVANIFNG
                     ERKIFIVNLLKDLNQTLMSYIQGQVTVSLILGAILYIGYSIIGLEYTMLLVMFAIVAN
                     MIPFLGPWMAFLPAGILGLIQSPTTFIWVCVITLIAQQLEGNVITPNVMGKSLNIHPL
                     TIIIVILASGSLGGFTLILVAVPLYAVLKTIVRNVFKYRHQIMHKAHSDVEDKGML"
BASE COUNT          473 a          219 c          245 g          396 t
ORIGIN      
        1 ctccatgact tcattatgtc aagacattta agtctattct atagtagatg aatatgatga
       61 atacgaaaaa ttgttaaaag aaagctttgt tagcatttac tgttttggtt ttgtatagtt
      121 acgagaataa cagcgattaa attgagcgtt gagaaagata atcattggag gagcgacata
      181 aatatttcgg atgtcattga taagttgtga gaagatagag gtatagagaa cttaatgact
      241 cttcggcaat ttattagttt tattgatttt gaaagttaag caataaaaaa catgctaacc
      301 gcattgttga agttagcatg tctctttatc aattaaagca ttcctttatc ctcgacgtca
      361 ctatgggctt tatgcataat ttgatgacgg tacttgaaca cgttacgtac gatagtttta
      421 agtactgcat aaagtggtac tgcgactaaa atcagtgtaa agccgcctaa actacctgaa
      481 gctaaaatca caatgataat cgtaagtgga tgaatgttta atgatttacc cataacgtta
      541 ggtgtaatga cgttaccttc gagctgttgt gcaatcaaag taataacaca gacccaaatg
      601 aacgtggttg gactttgaat taagcctaaa ataccagctg gtaagaacgc catccaagga
      661 cctaaaaacg gaatcatatt cgctacaatc gcaaacatga ctaagagcat tgtgtactct
      721 aaaccaataa tcgaataacc aatatataaa atagccccta gaattaaact cactgtcact
      781 tgaccttgaa tgtaagacat cagcgtttgg tttaaatctt ttaataagtt aacgatgaaa
      841 attttacgtt cgccattaaa aatatttgcg acggctggaa taaagcgttc gtggtctttt
      901 aacatataaa tcaagaagaa tggtactaaa atcaacaaga acaatgtcga cacaatactt
      961 gaaataatgt taagcgagtt agacaacaaa tccgaagcca tctgactaaa ataagacacg
     1021 atgtcgttaa ttttttctgt cacttgatca ggtaagcgat cgcgttggtc gagtgcaaaa
     1081 ttaattaaac gttcagcttc acgttgaata aatggaattt gatggattaa attctcgatt
     1141 tgtgtggcaa taaccggtcc aatcacacca atcactgccg ccatcattgc tgttaatgcg
     1201 agtaagataa tcgtaatact tgcccatctc ggtaaatgac gcttctcgag cattttttgg
     1261 aatggcaaac agatgtaaaa taaaaaacca ctcagcaata aaggtaatat aatagattga
     1321 atgataataa tga
//
LOCUS       DANHPA010000221         1322 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.227, whole genome shotgun sequence.
ACCESSION   DANHPA010000221 DANHPA010000000
VERSION     DANHPA010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1322)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1322)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.227"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..373
                     /locus_tag="PTC28_002480"
     CDS             <1..373
                     /locus_tag="PTC28_002480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="nucleotide pyrophosphohydrolase"
                     /protein_id="HDK5717701.1"
                     /translation="MFIVLTIMVQQIKKIMKIEDSDPLMQSAVIFSYILRDVELNTVD
                     YILTLGELGDKLLVFTEERTDLVSLSYILTKITDLIALLDVTAHFNNTDIKTCVQQAY
                     DEIKNRKGKIIDGKFIKEADL"
     gene            394..837
                     /locus_tag="PTC28_002481"
     CDS             394..837
                     /locus_tag="PTC28_002481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717702.1"
                     /translation="MKSDNTLAAERYLYNLLLKDKLSVYGCHEVTIGLEPLKKGREIV
                     DFLTYDSKNVFRAYEIKVTKEDLKSDSKLSFVGHYNYIVLPRKLYEEIKETDLLPFNV
                     GIIIVGEGLIKKSGRKTLSMSDNIKLLESLMRSLNRENKKHKFIF"
     gene            962..>1322
                     /locus_tag="PTC28_002482"
     CDS             962..>1322
                     /locus_tag="PTC28_002482"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDK5717703.1"
                     /translation="MIELIQMYRKNKLEIESLKLRKDICNDEIFNWGAVNANNDKAKL
                     GKKHDFLTRIQQTDNVIDELNIINERLQTLESRQKKILDVVDQFDGLEHQILKLRFIK
                     GYKITEIAAKLGYSEQYI"
BASE COUNT          525 a          161 c          246 g          390 t
ORIGIN      
        1 tatgtttatt gttttgacta ttatggtgca acagattaaa aaaataatga aaatagaaga
       61 cagtgatcct ttaatgcaaa gtgctgtaat attctcttat attttaagag atgttgaact
      121 taacacagta gactatatct taactttagg ggaattaggc gacaaattac tggtatttac
      181 tgaagaaaga actgatctcg taagcttaag ttatattcta acgaaaataa cagatttaat
      241 tgctttgtta gacgtaactg ctcattttaa caatactgat attaagacat gtgtgcagca
      301 agcatatgat gagattaaaa acagaaaagg aaaaattatt gatggtaaat tcatcaaaga
      361 agcagatcta taaatctaaa tgaggtgtta taagtgaagt cggataatac tttagcagca
      421 gaaagatatt tgtataactt gctgctaaaa gacaagttaa gtgtttacgg atgccacgaa
      481 gtcaccattg gactagaacc tttgaaaaaa ggacgagaaa ttgtagactt tttaacctat
      541 gatagcaaaa atgtctttcg agcatacgaa attaaagtta caaaagagga tttgaaaagt
      601 gactctaaat tgtcctttgt aggtcactat aattacattg ttttacctag aaaactatac
      661 gaagaaataa aagaaacaga cttattaccg tttaatgttg gaattattat tgtgggcgaa
      721 ggtctaataa aaaaatcagg cagaaaaact ttaagcatga gcgataatat caaattatta
      781 gaaagtttaa tgcgatcatt gaatagagaa aataagaagc acaaattcat attttaggag
      841 gtgtaggaat gaaatacatt attgcagcac tgatcatttt gtatgtagca catgatactt
      901 atattcgttt gacagctaac gatgatgtag atcaatacga tttcagagcg gaagtgagtg
      961 aatgattgaa ctgattcaga tgtatagaaa aaataaatta gaaatagaaa gtttaaagct
     1021 cagaaaagat atttgcaatg atgagatctt taattgggga gcagtgaatg caaataacga
     1081 caaggctaaa ttaggaaaga aacacgactt tctaacacgc atacaacaaa cggataatgt
     1141 aatcgatgaa cttaatatca tcaatgaacg cttgcaaact ttagagtcaa gacaaaaaaa
     1201 gatacttgat gtagttgatc aatttgatgg tttggaacat caaatactta aattaagatt
     1261 tattaaaggg tataagataa ctgaaatagc tgctaagtta ggttactcag agcaatacat
     1321 cc
//
LOCUS       DANHPA010000222         1317 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.228, whole genome shotgun sequence.
ACCESSION   DANHPA010000222 DANHPA010000000
VERSION     DANHPA010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1317)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1317)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.228"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(5..>1317)
                     /locus_tag="PTC28_002483"
     rRNA            complement(5..>1317)
                     /locus_tag="PTC28_002483"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          284 a          390 c          298 g          345 t
ORIGIN      
        1 ttagaaagga ggtgatccag ccgcaccttc cgatacggct accttgttac gacttcaccc
       61 caatcatttg tcccaccttc gacggctagc tccaaaatgg ttactccacc ggcttcgggt
      121 gttacaaact ctcgtggtgt gacgggcggt gtgtacaaga cccgggaacg tattcaccgt
      181 agcatgctga tctacgatta ctagcgattc cagcttcatg tagtcgagtt gcagactaca
      241 atccgaactg agaacaactt tatgggattt gcttgacctc gcggtttcgc tgccctttgt
      301 attgtccatt gtagcacgtg tgtagcccaa atcataaggg gcatgatgat ttgacgtcat
      361 ccccaccttc ctccggtttg tcaccggcag tcaacttaga gtgcccaact gaatgatggc
      421 aactaagttc aagggttgcg ctcgttgcgg gacttaaccc aacatctcac gacacgagct
      481 gacgacaacc atgcaccacc tgtcactttg tcctccgaag aggaaaactc tatctctaga
      541 gcggtcaaag gatgtcaaga tttggtaagg ttcttcgcgt tgcttcgaat taaaccacat
      601 gctccaccgc ttgtgcgggt ccccgtcaat tcctttgagt ttcagtcttg cgaccgtact
      661 ccccaggcgg agtgcttaat gcgttagctg cagcactaag gggcggaaac cccctaacac
      721 ttagcactca tcgtttacgg cgtggactac cagggtatct aatcctgttt gatccccacg
      781 ctttcgcaca tcagcgtcag ttgcagacca gaaagccgcc ttcgccactg gtgttcctcc
      841 atatctctgc gcatttcacc gctacacatg gaattccact ttcctcttct gcactcaagt
      901 tttccagttt ccaatgaccc tccacggttg agccgtgggc tttcacatca gacttaaaaa
      961 accgcctacg cgcgctttac gcccaataat tccggataac gcttgccacc tacgtattac
     1021 cgcggctgct ggcacgtagt tagccgtggc tttctggtta ggtaccgtca agatgtgcac
     1081 agttacttac acatttgttc ttccctaaca acagagcttt acgatccgaa gaccttcatc
     1141 actcacgcgg cgttgctccg tcaggctttc gcccattgcg gaagattccc tactgctgcc
     1201 tcccgtagga gtctggaccg tgtctcagtt ccagtgtggc cgatcaccct ctcaggtcgg
     1261 ctacgtatcg tcgccttggt aggccgttac cccaccaact agctaatacg gcgcggg
//
LOCUS       DANHPA010000223         1293 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.229, whole genome shotgun sequence.
ACCESSION   DANHPA010000223 DANHPA010000000
VERSION     DANHPA010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1293)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1293)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.229"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..339)
                     /locus_tag="PTC28_002484"
     CDS             complement(<1..339)
                     /locus_tag="PTC28_002484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717704.1"
                     /translation="MATINILNKVFSKNVLRELIREGESDLLNKAYYQIFNDDAPHLN
                     NHKKIEQLYNVLKKNYRNEYFFKNTMLNKLLLGKHALNTTVAMTELPIKRSKADFILI
                     NGKAIVYEIKT"
     gene            521..1066
                     /locus_tag="PTC28_002485"
     CDS             521..1066
                     /locus_tag="PTC28_002485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020219632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HDK5717705.1"
                     /translation="MTKYGLLIIDVQNDYFSGGKMVLHEPEKALHHIQQLEHDFKSKN
                     LPIIYIQHINIQPNPAFFEKGTDGVELHSELSLQDDSVIIEKHFPNSFFQTKLQATLD
                     QLEVDTLVITGMMTHMCVDSTTRAAAELGYNPVLIHNATATRNLAFNENNVQANDVQN
                     AFISSLSNFSTVMSTDDWIKA"
BASE COUNT          401 a          242 c          194 g          456 t
ORIGIN      
        1 tgtctttatt tcatatacaa tcgccttacc attgattaat atgaaatctg cttttgagcg
       61 ctttataggt aattctgtca tagcaacagt cgtattcaaa gcgtgcttac ctagaagtaa
      121 tttgtttaac atcgtgtttt taaaaaaata ttcattccga taattctttt ttaatacatt
      181 atacagttgt tctatttttt tatgattatt gagatgaggg gcatcgtcat taaaaatttg
      241 gtaataagcc ttgttcagta ggtcactttc gccttcacgt atcaattctc ttaacacatt
      301 tttagaaaac actttattta aaatattgat tgttgccatc gtcacacctc tttccatcat
      361 caccaggtca aaccttctca agtctattcg taaatctatt atacatgata tgtgcatagg
      421 atcctaccgt taatagtgat tgactttccg cttctcaatc actttaacat tgtccccatc
      481 tcgtttatgc taaatagtat aaactaagga ggtttgagtt atgacaaaat atggtttact
      541 tataattgac gttcagaacg attatttcag tggaggaaaa atggttttac atgaacccga
      601 aaaggccctt catcatattc aacaacttga gcatgacttt aaatcaaaaa atttacctat
      661 catttatatt caacatatca atatacagcc aaatcctgca ttttttgaaa aaggaacgga
      721 tggggtggaa ttacactctg aattatcatt gcaagatgat agcgtcatca ttgaaaagca
      781 ttttccaaac agtttctttc aaacaaaact tcaagccaca cttgatcagc tagaggtgga
      841 tacactcgtc attactggta tgatgacgca tatgtgtgtc gattctacaa caagagctgc
      901 cgctgaatta ggttacaatc ctgtgttgat tcataatgcg acagcgacac gcaatttagc
      961 atttaatgaa aacaatgttc aagcaaatga tgtacaaaac gcatttattt cgtcattaag
     1021 taatttttca acggtaatgt ctactgacga ttggataaaa gcataattca ttctatattc
     1081 tttgactact attggtgtat aggcatgatg acaaactcat tcataacgtc atgtacaatt
     1141 tagcaggctt tcttttatct tacagttatt gctgccattt atcatacagc atttgttatt
     1201 tttcaattcg cccggtcatt tcagtgatta ataacattcg ctttatgccc cacctattct
     1261 gcaatacatc actatgagtc atctgacttt caa
//
LOCUS       DANHPA010000224         1280 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.230, whole genome shotgun sequence.
ACCESSION   DANHPA010000224 DANHPA010000000
VERSION     DANHPA010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1280)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1280)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1280
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.230"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(397..594)
                     /locus_tag="PTC28_002486"
     CDS             complement(397..594)
                     /locus_tag="PTC28_002486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717706.1"
                     /translation="MKTFSENRLSLIIVIVAVIIGYALQYVFNLPLIAGAFIGVLLGV
                     LGGFITQLIKSKRERRNSKNS"
     gene            733..1239
                     /locus_tag="PTC28_002487"
     CDS             733..1239
                     /locus_tag="PTC28_002487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HDK5717707.1"
                     /translation="MKKITTGVLILAIAIVVLIFQYINGDGPFKKSSTDVRGESYLVK
                     RVIDGDTIIIDKDGQDERVRLIGVDTPETVKPNTPVQPYGKAASNFTKKHLTNQRVRL
                     EYDREPKDKYGRTLAYVWLGDEMFNVKLAKEGLARAKFYPPNDKYRILIEQAQKEAQK
                     KQLNIWER"
BASE COUNT          456 a          190 c          253 g          381 t
ORIGIN      
        1 ggaggtgtag tatggttttt gaatgtaaaa aaggaccatt gaatgtgaaa atagacatta
       61 aaaaaacgtc aatcaaagaa tgtattaaag gccttgtttt ttggagtatt attatttcat
      121 tggtcgcata ttcacgaaag aaaaataaga aagacgtcag taaatgataa aagggagcta
      181 tgattatgaa cgaaattact aaaatacgtc tcagaacagt attgaactat ggcattggag
      241 tggcagcatt aatttttgcg gtgtatatat taacgaaata gtgcactggg cagtaggatt
      301 cgttaaatga ttgatttgaa ttaaaaaggg gagttgctta tttttgcggc tcccctttta
      361 attaatctca gttgttagtc ttatcacgtg atattattat gaatttttgg aattacgccg
      421 ttctctcttg gatttaatga gttgcgtaat gaacccacct aaaacaccga gtaatacgcc
      481 gataaatgcg cctgcaatga gaggtaagtt gaatacatat tgcaaagcat aaccgattat
      541 cactgcaaca atcacgatga ttagagacag acgattttca ctaaaagtct tcattttttg
      601 gttcactcct aatcgttttg attataacat ttttcactga aaagaacagt gtcatatctg
      661 tgtaaaattg acgcttatag ttaggattac atatgatatg atggtgttaa tcatacataa
      721 aaaggagtcg ctatgaaaaa aattacaaca ggcgttttaa tccttgccat tgccattgtc
      781 gttttaatct ttcaatatat caatggagat ggccctttta aaaagtcttc aacggatgtg
      841 agaggcgaat catatctcgt taaacgcgta atcgatggag ataccattat tatcgataaa
      901 gatgggcaag atgaacgtgt acgcttaatt ggtgtggata caccagaaac agttaaaccg
      961 aatacgccag tgcaaccata cggaaaagct gcatcaaatt ttacaaagaa acatttaacg
     1021 aatcaacgtg ttagattgga atatgatcgt gaaccaaaag ataaatacgg acgtacattg
     1081 gcttatgttt ggttaggaga cgaaatgttt aatgtaaaat tagcaaaaga aggtttagct
     1141 agagccaaat tttatccacc gaatgataaa tatcgtatat tgattgaaca agcccaaaag
     1201 gaagcacaaa agaaacagct gaacatttgg gaacgctaaa acattaaaga cactttgagg
     1261 ctaatataca gtctcaaagt
//
LOCUS       DANHPA010000225         1188 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.232, whole genome shotgun sequence.
ACCESSION   DANHPA010000225 DANHPA010000000
VERSION     DANHPA010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1188)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1188)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.232"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            260..853
                     /locus_tag="PTC28_002488"
     CDS             260..853
                     /locus_tag="PTC28_002488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000690636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HDK5717708.1"
                     /translation="MKIGYARVSTGLQNLNLQEDRLNAYGCEKIFSDHISGSKSKRPG
                     LDKAIEFARSGDTIVVWRLDRLGRNMEDLITLVNELNERGVSFHSLEENITMDKSSST
                     GQLLFHLFAAFAEFERNLILERSSAGRIAARARGRYGGRPEKLNQKDLNLLKTLYDNG
                     TPIKTIAEQWQVSRTTIYRYLNKLEEKEDEKQGEVSN"
     gene            825..>1188
                     /locus_tag="PTC28_002489"
     CDS             825..>1188
                     /locus_tag="PTC28_002489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000790716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDK5717709.1"
                     /translation="MKNKEKYLTNFSEAKRKEATQKYNIIKPFILGKQSLSSISKSKG
                     IALSTLYRWNKLYKEQGLTGLIHNTRVDKGEHKLKQNIIDEIKRLALKNKRNSIATIH
                     RKIANYCIENNFYKPSYKQ"
BASE COUNT          462 a          159 c          213 g          354 t
ORIGIN      
        1 agatatgttt caaacataat acatatgtaa actatgcttg actcttatta aattagtttt
       61 gttaataaca tttaaaatat attattaaag atgagagtgt acagaaaata accattttct
      121 gtacactctc tttttatgcc gaaataagtg agtaatacat atattttcgt gttcaaaaac
      181 ccaacaaaaa atctatgttc acaaaagacc ttgaaattaa gttatggtac actgtatatg
      241 tatataggag gtttgtattt tgaaaatagg ttatgcaaga gtttcaactg gattacaaaa
      301 tctgaattta caggaggacc gattaaacgc atatggttgt gaaaagatat ttagcgacca
      361 tattagtggt tcaaaaagta aaagacctgg attagataaa gcaattgaat ttgcgagatc
      421 aggagatacg attgttgttt ggagactcga cagactagga cgtaatatgg aggatttaat
      481 cacattagtt aatgagctta acgaacgagg tgtaagtttc catagtttag aagaaaatat
      541 aacgatggat aaatcaagtt ctacaggaca attattattt catttattcg cagcgtttgc
      601 agaatttgaa cgaaatttaa ttttagaacg ttcttcagct ggccgaattg cagcacgtgc
      661 tagaggacgc tatggaggta gacccgaaaa attaaatcaa aaagatttaa acttacttaa
      721 gacactttat gataatggca cgccaattaa gacaattgca gagcagtggc aagtttcacg
      781 tacaacgatt tatcgttacc tcaataaatt ggaggaaaag gaagatgaaa aacaaggaga
      841 agtatctaac taatttttct gaagccaaac gtaaagaagc tactcaaaag tacaatatta
      901 taaaaccttt tatcttgggc aagcaatctt tatcaagcat ttctaaaagc aaaggtattg
      961 cgttaagtac actttatagg tggaataaat tatataagga acaaggtctt actggtctaa
     1021 ttcataatac aagagttgat aaaggtgagc ataaattaaa acaaaacata atagacgaga
     1081 ttaaacgcct tgcactcaag aataaaagaa atagtattgc tacgattcat aggaaaatcg
     1141 ctaattattg tatagagaat aatttttata aaccaagtta taaacaag
//
LOCUS       DANHPA010000226         1170 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.234, whole genome shotgun sequence.
ACCESSION   DANHPA010000226 DANHPA010000000
VERSION     DANHPA010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.234"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            1..1170
                     /gene="cstB"
                     /locus_tag="PTC28_002490"
                     /pseudo
     CDS             1..1170
                     /gene="cstB"
                     /locus_tag="PTC28_002490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000465472.1"
                     /note="internal stop; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="persulfide dioxygenase-sulfurtransferase CstB"
BASE COUNT          423 a          182 c          199 g          366 t
ORIGIN      
        1 atttaacaaa atatttaaaa gttgcagata aagaaggatt cacaattact aaagctgcag
       61 aaacacatat tcatgctgat tttgcttcag gtattagaga tgtggcaaat aaattgaatg
      121 caagtatata cgtatctgat gaaggtaaag atgaatttaa ttataaaaat atgcctaaac
      181 aaacacattt cgttaagcat caagatatta tctatttagg aaagattaaa ttagaagtct
      241 tacacactcc aggccatccc cctgagagta ttagtttttt acttactgac gaaggtgggg
      301 gttccagtat accaatggga ttatttagcg gtgacttcat ctttgttggt gatgtaggta
      361 gaccagatct attagaaaaa gctgtaaatg ttgaaggttc tacaaaaatc ggagcaaaac
      421 aaatgtatca gtccatacaa tttgctgcaa cattaccaga ctatattcaa atttggccag
      481 gtcatggtgc agggagtcct tgtggtaaag cgctaggttc attacctaca actactttgg
      541 gttatgagaa aataaacaac tgggctttta atgttaaaga tgaaacttca tttatcgaaa
      601 ctttaacact caatcagcca gctccaccac accatttttc acaaatgaaa aaaataaatc
      661 aatttggtat gcaaatgtac caaccatata atgtttaccc tagttcaagc aatacacaaa
      721 ctgcttttga tcttcgaagt aaagaagcat tccatggtgg tcatatgcat ggaactatca
      781 atattccttt taataaaact tttataaatc aaattggttg gtatttagat tatgactaag
      841 atattgaatt aattggcgat aaatctaccg ttcaacaagc tattcatgct ttacaattaa
      901 ttggttttga aaatgtaaaa agttaccgtt tgccacaaac aaatatcgtc acatcatcta
      961 ttcatagttc tgaaatgact ggtgaagaac ataatgtatt agatgttcgt aatgatgatg
     1021 aatggcgtaa aggtcattta aaacaagcaa ttcatattcc tcacggtaaa cttttaaatg
     1081 aagatatacc tttcgataaa aatgacctaa tttatgtaca ttgtcaatca ggtgttagaa
     1141 gttcaatagc ggtaggaata ttagaatata
//
LOCUS       DANHPA010000227         1167 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.235, whole genome shotgun sequence.
ACCESSION   DANHPA010000227 DANHPA010000000
VERSION     DANHPA010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1167)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1167)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.235"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..328
                     /locus_tag="PTC28_002491"
     CDS             <1..328
                     /locus_tag="PTC28_002491"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5717710.1"
                     /translation="IQLSLLPKILNENQLIDGNAYFSIAYQSSDALFNALAGIVITAF
                     GLFSIYVIDSVTFLINGVMFIFLSRQIYLINRHKTVEKSGYLKMHFQTLCSGLALWKG
                     KLFFPY"
     gene            298..906
                     /locus_tag="PTC28_002492"
     CDS             298..906
                     /locus_tag="PTC28_002492"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717711.1"
                     /translation="MERKIIFPLLIGVIVINFSVTGIFANLPFYALGELHYSLLMSSS
                     GIGILAGSLIVKGKWMRSVPLGVFYILGIALIGVSWILFSLLKHESTFIMIVSFVLFL
                     TGWVVVGMFNIISQTIIQLSVSEEQLGMAMGTMIGVSTSIAPLGALLGGSLGVLFGSH
                     TVMILFASLLVFVSVFWMSQSSIRELTDFEHIEWGRQDYWKT"
BASE COUNT          351 a          121 c          248 g          447 t
ORIGIN      
        1 aatacaattg agcttattgc ctaaaatttt aaatgaaaat caattaattg atggtaatgc
       61 ctattttagt attgcatatc aaagtagtga tgcgttattc aatgcgttag caggaatagt
      121 gattactgca tttggattgt tttctattta tgttattgat agtgttactt ttttgattaa
      181 tggtgtgatg tttatatttt tgagccgaca aatatattta ataaatcggc ataagactgt
      241 agaaaagagt gggtatttga aaatgcattt tcaaacgctt tgttctgggt tagctttatg
      301 gaaaggaaaa ttatttttcc cttactaata ggtgtcattg ttattaattt ttcagtaact
      361 ggtatttttg caaatttacc gttttatgca ttaggagaac tgcattatag ccttttaatg
      421 tctagttctg gaattgggat tttagcggga tctctaattg taaaaggaaa gtggatgagg
      481 agtgttcctt taggtgtgtt ttatatccta ggcattgcac ttatcggtgt ttcttggatt
      541 ttattttcgt tacttaagca tgaaagcact tttataatga ttgtctcatt tgttttattt
      601 ttaacgggtt gggttgttgt gggtatgttt aatattattt ctcagacaat tattcaatta
      661 tctgttagtg aagaacaact aggaatggcg atgggaacaa tgattggggt ctccacatca
      721 atagctcctc tgggtgcgtt attaggtggg agtttaggtg ttttatttgg gagtcacacg
      781 gtaatgatat tgtttgcaag cttattagtg tttgtgtcgg tattttggat gtctcaatct
      841 tcaattagag aattgactga tttcgagcat atagagtggg ggagacaaga ctattggaaa
      901 acttaaaaat agttttagca gatgaagcgg atgttgattt tttattagat atatataacg
      961 acgattttgt aaatttagta gctttacaag gaggagaatc aagtatttaa aaaaatgata
     1021 tcaagaatac tttgaaaata tttaaagaaa agggggacga attttttatt aaacaaggtg
     1081 aagagaatgt ttggaatggg aatgctatat gactttgatt attataataa aaattctcgt
     1141 attggtcttg cgcttcataa aaactaa
//
LOCUS       DANHPA010000228         1151 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.237, whole genome shotgun sequence.
ACCESSION   DANHPA010000228 DANHPA010000000
VERSION     DANHPA010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1151)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1151)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.237"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            81..539
                     /gene="perR"
                     /locus_tag="PTC28_002493"
     CDS             81..539
                     /gene="perR"
                     /locus_tag="PTC28_002493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide-responsive transcriptional repressor
                     PerR"
                     /protein_id="HDK5717712.1"
                     /translation="MTAELESHDHQLKESIASLREAGVRITPQRQAILNFLIKAESHP
                     TADEIYQSLSPDFPSISVATIYNNLKVFKKTGIVKELTYGDASSRFDFDTQNHYHVIC
                     EKCGKIVDFHYPLLHEVEQLAQHVTEFDVTHHRMEIYGVCQSCKEAEKEL"
BASE COUNT          414 a          151 c          209 g          377 t
ORIGIN      
        1 ataaatattg acaataaata ggtaaacctt atatattatt aggtaagaat tattattaat
       61 aagaaagacg ggtgaaccta atgactgctg aattggaatc tcatgatcat caattaaaag
      121 agtcaatagc gtctttacgt gaagcaggcg tgcgtattac accgcaacgt caagcaatat
      181 taaatttcct catcaaagcg gaatcacatc caactgctga cgaaatatat caatcattat
      241 cacctgactt cccaagtata agtgttgcaa cgatttacaa taaccttaaa gtatttaaaa
      301 agacaggcat tgttaaagag ttaacatatg gtgatgcgtc gagtcgtttt gatttcgaca
      361 cacagaatca ttatcatgtc atctgtgaga aatgtggtaa gattgttgac ttccactatc
      421 cattacttca tgaagttgaa caacttgcgc aacatgtaac agaatttgac gtcacgcatc
      481 acagaatgga gatatatggt gtttgtcaat cgtgtaaaga ggctgaaaaa gaattataag
      541 tgattgaagg cttattcaga aagcgtatga atgaaacgtt atgatgaata agcctttttt
      601 aagttttagt gattattttt agtttaagat gcgttgattg ttttgaatcg tgcatgttaa
      661 ttcaggtatt aaatttttga acgacggaca acttagtaag atgttaatct tcttggttag
      721 aactgaacga tatgtgtgcg ttcgcttttg aattgagtga cgctataact gtttaaattg
      781 attcaaaaga taattcacgc tatgttttaa atgttttgat gtaaaaataa ctcaatacgt
      841 gttagttttc aaaaacatag taaatttgat tagaaataac agttgatttt gtgttgacga
      901 tgggtattct acttggtaag ataaggaagt cgtttcgagg agattgtaaa aataatgctt
      961 tcatgattga acgcatgtaa acgaatgatt aaaagtgtaa aattaacgct tgaaactttc
     1021 tccgtaacat tataagatat taaatgttga acgagacaac aacttattaa caaaaaattt
     1081 aaaaaaactt taaattaaat cttgacagag aaatttgttt aaagtataat gttttcttgt
     1141 aacagcaaaa a
//
LOCUS       DANHPA010000229         1133 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.238, whole genome shotgun sequence.
ACCESSION   DANHPA010000229 DANHPA010000000
VERSION     DANHPA010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1133)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.238"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            3..1085
                     /locus_tag="PTC28_002494"
     CDS             3..1085
                     /locus_tag="PTC28_002494"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HDK5717713.1"
                     /translation="MSEKIELKVSQTLKEKPDLNQLTFGEVFTDYMLSFEYSTAEGWH
                     DLKIIPYGPIELSPAAQSLHYGQAVFEGLKAYKHDGEVVLFRPEENFKRINQSLERLK
                     MPQIDEALLLEGLKQLVDIDRDWVPSGEGQSLYIRPFVFATQGALGVHPSHEYRLLII
                     LSPSGSYYGGDSLRPTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQANANQLGFDQ
                     VLWLDGVEQKYVEEVGSMNIFFVIDGKVVTPSLNGSILPGITRKTVLELAASLGYETE
                     ERRISIDELYELHQSGALTEVFGTGTAAVISPVGTLQYREEEIVINNNETGPITQKLY
                     DHYTGIQSGQLEDPHGWRVVVPHYER"
BASE COUNT          362 a          195 c          254 g          322 t
ORIGIN      
        1 tcatgtcaga aaaaatcgaa ttaaaagtga gccaaacatt aaaagaaaag cctgatttga
       61 atcaactcac ttttggtgaa gtctttaccg attacatgtt aagttttgaa tactcaacag
      121 cagaaggatg gcacgattta aagattattc cttatggtcc aattgaactg tcaccagctg
      181 cacaaagtct ccattacgga caagctgttt ttgaaggatt aaaagcatat aagcatgatg
      241 gcgaagttgt cttgtttaga cctgaggaaa actttaaacg aattaatcaa tcattagaac
      301 gcttaaaaat gccgcaaatt gatgaggcgt tattattaga aggattaaaa caactcgtcg
      361 atatcgatcg tgattgggtg ccgagtggag aaggtcaatc gctctatatt cgaccatttg
      421 ttttcgctac acaaggcgct cttggggtgc atccttcaca tgagtatcgc ttattaatca
      481 ttttatcgcc atctggttca tattatggcg gagattcatt acgtccaacg aaaatttacg
      541 tagaagatga gtatgtacgt gcagtacgtg gtggtgtcgg atttgcaaaa gtagctggca
      601 actatgcagc aagcttactc gcacaagcca acgcaaatca actcggcttt gaccaagtgt
      661 tatggttaga tggtgtggag caaaaatatg tggaagaagt gggaagcatg aacatcttct
      721 tcgtcattga tgggaaagtg gtcacaccgt cattgaatgg tagtatttta cctggtatta
      781 ctcgcaaaac agtattagaa ttagctgcat cattaggcta tgaaactgaa gaacgccgta
      841 tttctattga tgaattgtat gaattacatc aaagcggtgc cttgacagaa gtatttggta
      901 caggtacggc cgctgtgatc tcgccagtgg gtacgttgca atatagagaa gaagaaatcg
      961 tgattaataa caatgaaaca ggtccaatta cgcaaaaact atatgatcat tatacaggca
     1021 ttcaaagtgg acaattagag gatccacacg gttggcgcgt tgtcgttccg cattatgaaa
     1081 gataataaca atgaaaagct aggaatcctg atatgacggg gtttctagtt ttt
//
LOCUS       DANHPA010000230         1130 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.239, whole genome shotgun sequence.
ACCESSION   DANHPA010000230 DANHPA010000000
VERSION     DANHPA010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1130)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1130)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.239"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            86..1075
                     /gene="ccpA"
                     /locus_tag="PTC28_002495"
     CDS             86..1075
                     /gene="ccpA"
                     /locus_tag="PTC28_002495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolite control protein A"
                     /protein_id="HDK5717714.1"
                     /translation="MTVTIYDVAREARVSMATVSRVVNGNQNVKPETRDKVNEVIKRL
                     NYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLARGLEDIATMYKYHTIISNSDDDP
                     EKEKEIFNNLLSKQVDGIIFLGGTLTDEIKEQISRASIPVVVSGTNGKDDGIASVNID
                     FVQASKEVTAQLVKTGSKKFAFVGGGYSKKAQEDVYEGLKEVLEQHQLAVDEHLLYVG
                     NETYTDGLRAYEKLSHYQPDAVLSISDEQAIGIVHGALDHGLEVPKDIQVVSFNNTRL
                     VEMVRPQLSSVIQPLYDIGAVGMRLLTKYMNNEDIENPNVILPHKIQYRGTTR"
BASE COUNT          411 a          171 c          236 g          312 t
ORIGIN      
        1 tgatcattga aattatgata cactttgaaa atgacatgaa aacttattat aatactaaat
       61 aaagcgtttt ctaggaggaa cgattatgac tgtaaccatt tatgatgtgg cgagagaagc
      121 aagagtatct atggcgacgg tatcacgtgt agtgaatggt aatcaaaacg tgaaacccga
      181 aacaagagat aaagtgaatg aagtaatcaa acgtttaaac tatcgtccaa atgctgtagc
      241 aagagggtta gcaagtaaaa aaacaacgac agtaggtgtg attataccgg atatttctaa
      301 catctactac tcacaattag cacgaggatt agaagatatt gcgacgatgt ataaatatca
      361 tacaattatt tctaattcag atgatgaccc tgagaaagaa aaagaaatct ttaacaattt
      421 attaagtaaa caagtggatg gtatcatttt ccttggtggt actctgacag atgagattaa
      481 agaacaaatt agccgtgcat ctattccagt tgtcgtatca ggaacaaatg gtaaagacga
      541 cggtattgca tcggttaaca ttgatttcgt gcaagcaagt aaagaagtga cagcgcaatt
      601 agttaaaacc ggttctaaaa agtttgcttt cgttggtggt ggctattcta aaaaggctca
      661 agaggatgtc tatgaaggcc ttaaagaagt gttagaacaa catcagctcg cggttgatga
      721 acatttacta tacgttggta atgaaacgta tacagatggg ttacgtgcat atgaaaagtt
      781 aagtcattat caaccagatg cggtattatc tattagtgac gaacaagcca ttggtattgt
      841 tcacggtgcg ttagatcatg ggttggaagt accgaaagac attcaagtgg tgagcttcaa
      901 caacacacgt ttagttgaaa tggtgagacc acaattatca agtgttatcc aacctttata
      961 tgatatcgga gcggtaggta tgcgtctctt aacaaaatat atgaacaatg aagatatcga
     1021 gaatccaaat gtaattttgc cacataaaat tcaataccgt ggcacaacac gttaatcatg
     1081 aattaaacga caaatatgaa aaaaggctaa gataacatga ttgtcttagc
//
LOCUS       DANHPA010000231         1123 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.240, whole genome shotgun sequence.
ACCESSION   DANHPA010000231 DANHPA010000000
VERSION     DANHPA010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1123)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.240"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..>1123
                     /locus_tag="PTC28_002496"
     CDS             <1..>1123
                     /locus_tag="PTC28_002496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HDK5717715.1"
                     /translation="SEQKVWVIGEKSYKAQDNGYHFFKYLRKHHPEIPAYYIIERESQ
                     EVRNVLPLGNVIYYRSPEHFKIMLEADYICSTHHPHLLYPTNSKIYTKKISATKIFLQ
                     HGVLGTKNLTEINGNHLIDFDVDLFVTSSEREKEIVVRDLNFNDSQVLVSGLPRFDEL
                     FNPNVTVKKQILIIPTWRDWLTNLESVENSEYRIRMEQLLHSPKLKTLHSKGFSIIFC
                     LHPNMQPFLKLFDVPKYITSIKQGDVDVQRLIQESQLMITDYSSVAFDFSFLNKPVIY
                     YQYDTNQFLGNQPSHIDIESELPGVIVNNINHLENEIQNTVDNNFIVNKEIKARAKTF
                     YSFNDQNNSKRVYNLILNARQTGTIKSKIIFDPLTQHLT"
BASE COUNT          418 a          186 c          166 g          353 t
ORIGIN      
        1 aaagtgaaca aaaagtgtgg gtaatcggtg aaaaatctta caaggcccaa gataatggtt
       61 atcatttctt taaatattta agaaaacatc atcctgaaat cccagcatat tatattattg
      121 aacgtgaatc tcaagaagtt agaaatgttt taccacttgg taacgttatt tattatcgtt
      181 ctcctgagca cttcaagatt atgttagaag ctgactatat ttgttctaca catcacccac
      241 atttgttata tccgacgaac agtaaaatat acacaaaaaa aataagtgca accaaaattt
      301 ttctccaaca cggggtactt ggtactaaaa acctcactga aataaatgga aaccacttaa
      361 ttgattttga tgttgatctt ttcgttacaa gttcggaacg tgaaaaagaa attgtagtta
      421 gagatctaaa ttttaatgat agtcaagtat tagttagtgg tttaccgcgc tttgatgagc
      481 tattcaatcc gaacgttaca gttaaaaagc aaattctcat cattccaaca tggagagatt
      541 ggctaaccaa tttagaaagc gtcgaaaatt ctgagtatcg tatccggatg gaacaattat
      601 tacactcacc taaattaaaa acacttcaca gtaaaggatt tagtattatt ttctgcttac
      661 atccaaacat gcaaccattc ctaaaattgt tcgatgttcc taaatatatt acaagtatta
      721 agcagggaga tgtcgatgtt caacgactca ttcaagaaag ccaactaatg attacagatt
      781 attctagtgt tgcatttgat ttcagtttct taaataaacc tgtgatttac taccaatatg
      841 atactaatca gtttctaggg aatcagccat cccatattga tattgaatca gaattaccag
      901 gggtaatcgt taataacatt aatcatttag agaatgaaat acaaaatact gttgacaaca
      961 attttatagt aaacaaagaa atcaaagccc gtgcgaaaac attttattct tttaatgacc
     1021 aaaataattc taaaagagtt tataatttga ttctaaatgc tagacaaact ggaaccatta
     1081 aaagcaaaat catttttgat ccgttaacac aacatttaac taa
//
LOCUS       DANHPA010000232         1119 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.241, whole genome shotgun sequence.
ACCESSION   DANHPA010000232 DANHPA010000000
VERSION     DANHPA010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1119)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1119)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1119
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.241"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..119)
                     /locus_tag="PTC28_002497"
     CDS             complement(<1..119)
                     /locus_tag="PTC28_002497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic lactone autoinducer peptide"
                     /protein_id="HDK5717716.1"
                     /translation="MRILEVLFNLITNLFQSIGTFAKIPTSTGFFDEPEIPEE"
     gene            complement(121..687)
                     /locus_tag="PTC28_002498"
     CDS             complement(121..687)
                     /locus_tag="PTC28_002498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory gene regulator AgrB"
                     /protein_id="HDK5717717.1"
                     /translation="MLLIDNGIEKMALKLQQRQNLSHIEFLKVRLGMQVVVINSFKAV
                     VTYGLALLLNIFLYTLIVHLTFLALRTYSHGAHAKTSMLCHVQNIASFVVLPWLIVQY
                     DISFQFLLSLSILAAMIVIKYAPAATKKRPIAPRRVKGLKIKSIIVFILLMTLAFIVP
                     TPYNRFVVYGVLLQSFTLLPIFSTKEEV"
BASE COUNT          379 a          179 c          192 g          369 t
ORIGIN      
        1 aattcctcag ggatttctgg ctcatcaaaa aatccagtac tagtagggat tttagcaaaa
       61 gtaccgattg attggaataa atttgtaata aggttgaata aaacttctaa aattctcatg
      121 ttaaacttcc tccttagtag aaaaaatagg taataatgtg aatgattgta ataatacccc
      181 ataaacgaca aagcgattat aaggcgttgg tacgatgaat gcaagagtca tgagtaaaat
      241 gaatacaatg attgatttga ttttaaggcc tttcactctt cttggagcta ttggtctttt
      301 tttcgttgca gcgggtgcat atttgattac gatcatcgca gccaatatac tcaagcttaa
      361 caaaaattga aacgaaatgt catattgtac tattaaccat ggtaaaacaa cgaatgaagc
      421 aatgttttgt acatgacaaa gcattgaagt tttcgcatgt gccccatgag aataagtcct
      481 caaggcaaga aaagttaggt gaacaatgag tgtgtataaa aaaatgttta ataggagtgc
      541 aagcccgtaa gtcacaacag ctttaaatga gttaatcacg acaacttgca tgcctaaacg
      601 cacttttaaa aactcaatat gacttaaatt ctgtcgttgt tggagcttca gcgccatttt
      661 ttcaattcca ttgtcaataa gtaacatacg gctctcctcc ttgtctaaat tataatacac
      721 aactattaaa acgctttatt ttttgcctaa ctgttcattt atcattccta actgttgtga
      781 ttggttgttt tttaatattt taccataaat ttttaaacag ttaagcataa aaatcaacaa
      841 cttacgcact ggttaacaca aggaccaaaa aacatgttgt aatatagtca tcatcacatt
      901 ggtgatggag ataaagtgat tttgtattaa gtgttgtcga gtacacttaa tcaaatttac
      961 tgattaagtt aagtcagatg ttcttagtca ttgtattctt cgctcagctt acatgactaa
     1021 gggagcaaca atctattgga gtctttgatt ttatttataa tttaaggagg tgctcactat
     1081 ggcagcagat atcattagca caatcgttga atttgttaa
//
LOCUS       DANHPA010000233         1107 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.244, whole genome shotgun sequence.
ACCESSION   DANHPA010000233 DANHPA010000000
VERSION     DANHPA010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.244"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            361..549
                     /locus_tag="PTC28_002499"
     CDS             361..549
                     /locus_tag="PTC28_002499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002474889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HDK5717718.1"
                     /translation="MRREIIELLNSNISAYKISKDTGVNEATIKQLRLGKSKLDRLGL
                     LNAEKLYNYQKQLEKENE"
     gene            complement(719..790)
                     /locus_tag="PTC28_002500"
     tRNA            complement(719..790)
                     /locus_tag="PTC28_002500"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(755..757),aa:Arg,seq:ccg)
     gene            942..>1107
                     /locus_tag="PTC28_002501"
     CDS             942..>1107
                     /locus_tag="PTC28_002501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HDK5717719.1"
                     /translation="MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSI
                     VSQLLFLQAQD"
BASE COUNT          412 a          165 c          209 g          321 t
ORIGIN      
        1 gcgtaaaaat taaaaaagtt agtgaaaggg gttgactacg ttagaatgct aacgtataat
       61 ataagtatac caaacagaag ggaggtaaaa taaatgaaga aacaaaaaaa gctcaaaagc
      121 tttaagttct cgataaaact taacttggcg gttatcgtaa tcgagatagc ttttgaacta
      181 aactaaatag tgggagggta acctcccttt caaatttagt atataatgtt cttcatttat
      241 ttgcaaacta tgaagataaa atatagtatc agaaaaacga acaaaaaaga aaaaatcgaa
      301 tttatagcat gtttgttatt tgtagtattg ttggtatata tagcgaaggt ggtgttctaa
      361 atgagacgtg aaatcataga actacttaac tctaatatta gcgcatacaa aataagtaaa
      421 gacacaggcg tgaatgaagc aactattaag caattaagat taggaaagtc taaattagat
      481 cggttaggtt tgttgaatgc cgaaaaatta tacaactacc aaaaacaact cgaaaaagaa
      541 aacgaataaa ttaaccccgc ctgcaatagg tggggtagtt aaaagtttta aggactcggg
      601 tccctaaaaa gtccctaaaa attagtttca tatggtgtgt tattgactag caaaacaaaa
      661 agaaccccgt cgttacagga ttcttaattt taaaaagtgt gttattgaat ggtatgaacc
      721 ccctcgagag gaatcgaacc tctattgtaa gaaccggaat cttatgtgtt atccattaca
      781 ctacgagggg ttaattgctt aagtctattc accattgtac ctttcgggca tgcgagggtc
      841 aactcctagc aaaaatttgt ctatgagtgc gttgtttttg accatttttg acttttgggt
      901 tagaatagaa acaaattaat aaatttagga ggaatcatca aatgaattta attcctacag
      961 ttattgaaac gacaaaccgc ggtgagcgtg catacgatat ttactcacgt ttattgaaag
     1021 accgtatcat catgttaggt tcagcgattg atgataacgt agcaaactca atcgtatcac
     1081 aattattatt cttacaagca caagacg
//
LOCUS       DANHPA010000234         1105 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.245, whole genome shotgun sequence.
ACCESSION   DANHPA010000234 DANHPA010000000
VERSION     DANHPA010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1105)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1105)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1105
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.245"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            236..>1105
                     /locus_tag="PTC28_002502"
     CDS             236..>1105
                     /locus_tag="PTC28_002502"
                     /inference="COORDINATES: protein motif:HMM:NF019310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5717720.1"
                     /translation="MTSQIFKLISNDFVVGLGNSIFSLVMMWYVLNQTGSAYYTATIG
                     SLSHIAQILVGSYAGIKADQMNQPVKMMVYSLRFNGIFLLIIGFVVLILDFNLYLLIV
                     LLFLREVTMVFQLPNQNKLIPRLVQAQEDVKRILSYRSLTKNLSMMLGFAIAGFLFSA
                     VPFFILILLIMVLFIIGSSAINTIKVTNKMHTFKSKRKKQKSLDEFKVVLNMILKDYY
                     LKRVMITAMMLNIISMVAPTFVVYFNQYLHAQPKDYGMFQFFIALGSILAASIGLKLK
                     HKMSSYNILVTFWS"
BASE COUNT          361 a          145 c          196 g          403 t
ORIGIN      
        1 tataaaaaag cgcctttagt gtacggtaaa gtatatgcaa aaaaagttga tatctatatt
       61 atagttattc gtccgtatct tggggaaaaa gatgacaaat tctttataaa gtatccgagt
      121 ttgaaacatg gaaaattaga atgttttgac ctaaatggta ataatataga agaattactt
      181 aaatatgatg atatactgaa ttctgaaaat tactatacga ggttaaaata tcagcatgac
      241 atcgcaaatt tttaaattaa tttcaaatga ttttgttgta ggtttgggga acagtatttt
      301 tagtctggtg atgatgtggt atgtactcaa tcaaactggc tcagcgtact atacggcaac
      361 aattggctct ttatcacata ttgctcaaat attagttggc tcttatgcag gaattaaagc
      421 agatcaaatg aatcaacctg taaaaatgat ggtctatagc cttcgtttta atggcatatt
      481 tcttttaatt attggttttg ttgtcttgat acttgatttc aatctttatt tattgattgt
      541 tttattgttt ttgagagaag tgacgatggt ttttcaactg ccaaatcaaa acaaattaat
      601 tccgcgttta gtacaggctc aagaagatgt aaagcgtatt ttgagttata gaagtttaac
      661 aaagaatctg tccatgatgt taggttttgc gatagcggga tttttatttt ctgcagtccc
      721 tttttttata ttaattctat tgatcatggt gctgtttatc atcggttcaa gtgcaattaa
      781 tactataaag gtgacaaaca agatgcatac gttcaaatca aaacgaaaaa agcagaaatc
      841 tctggacgaa ttcaaagtag ttctcaatat gattttaaaa gattactact taaaacgtgt
      901 aatgattact gcgatgatgt tgaatattat tagtatggtc gccccgacat ttgtggtcta
      961 ttttaatcaa tatttacatg cgcaacctaa agattatggt atgtttcagt tttttatcgc
     1021 tttaggaagt atactcgcag cttcaatagg attaaaatta aagcataaga tgtcttctta
     1081 taacatttta gtcacttttt ggtcg
//
LOCUS       DANHPA010000235         1089 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.247, whole genome shotgun sequence.
ACCESSION   DANHPA010000235 DANHPA010000000
VERSION     DANHPA010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1089)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.247"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(64..>1089)
                     /locus_tag="PTC28_002503"
     CDS             complement(64..>1089)
                     /locus_tag="PTC28_002503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001837745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE/DsrF/DrsH-like family protein"
                     /protein_id="HDK5717721.1"
                     /translation="KEELEKLAKMGQLIDVRTKEEYELGHINGSTLHPVEEIKSFNKN
                     SNKTYYIHCKSGNRSTKACDYLAKQGYDVVNLKGGYKDYEAKNFNSAPLIEKDIEIKE
                     NRKQFDFRGLQCPGPIVNISKEINNISTGEQIEVTVTDPGFNSDIKSWAKQTGNTLVN
                     LTEEANVINAIIQKEKPKEFEINDTATGTTIVLFSGELDKAVAAMIIANGAKAAGKDV
                     TIFFTFWGLNALKKAQSTRVKKKGISKMFDLMLPKDPIHMPLSKMNMFGLGNIMMRYV
                     MNKKNVDSLYSLIDQAIDQDIKLIACTMSMDVMGISKEELRDEVDYGGVGTYIGHTEQ
                     ANHNLFI"
BASE COUNT          317 a          201 c          144 g          427 t
ORIGIN      
        1 aattgtcttc ataaaattgt ttgaaaaaca aaaaaaactc ctttttaaaa tagattttat
       61 tgattagata aataagttat gatttgcttg ctcagtatgt ccaatataag tacctacgcc
      121 accataatcg acttcatctc ttaattcttc ttttgaaatt cccataacat ccatactcat
      181 ggtacaagca attaacttta tatcttgatc gattgcttga tcgataagtg agtataaaga
      241 atcaacattt ttcttgttca ttacataacg catcataata ttacctagtc caaacatatt
      301 catttttgat aatggcatat gtattggatc cttaggtaac ataaggtcaa acattttgga
      361 aatacctttc tttttaacgc gagttgattg cgcttttttt aatgcgttga ggccccaaaa
      421 agtaaagaaa atagttacat ctttacctgc tgctttagcg ccatttgcga tgatcattgc
      481 tgctactgcc ttatctaact caccgctaaa taaaacaatt gttgtacctg tagcagtgtc
      541 attgatttca aattcttttg gcttttcttt ttgaataatt gcattaatta catttgcttc
      601 ttcagtaaga tttacaaggg tattccctgt ttgtttcgcc caacttttaa tatcactatt
      661 gaaaccagga tctgtaactg ttacctcgat ttgctcaccc gttgaaatat tgttaatttc
      721 tttactgata ttaacaatag gtccagggca ctgaagacct ctaaaatcaa attgtttacg
      781 attctctttg atttcaatat ctttttctat taaaggagca ctattgaagt tctttgcttc
      841 ataatcttta tatccaccct ttaaattcac gacatcataa ccttgtttgg ctaaataatc
      901 gcaagcttta gtgcttcggt taccgctttt acaatgtata taatacgttt tgttgctatt
      961 cttattgaat gatttaatct cttctactgg gtgtaaagtt gaaccgttaa tgtgtcctaa
     1021 ttcatattct tcttttgttc taacatcaat caattgaccc atttttgcca atttttctaa
     1081 ttcttcttt
//
LOCUS       DANHPA010000236         1085 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.248, whole genome shotgun sequence.
ACCESSION   DANHPA010000236 DANHPA010000000
VERSION     DANHPA010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1085)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1085)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.248"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(178..1062)
                     /locus_tag="PTC28_002504"
     CDS             complement(178..1062)
                     /locus_tag="PTC28_002504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HDK5717722.1"
                     /translation="MQLEYKISQAKKGATLSIITYTFLTLLKIAYGWLASSQGLVADG
                     INNATDVISSIAILIALQISMKPVDNNHPYGHYRSEFIASLIASFIMFAVSIQVIITG
                     VKHFYQGEFVQPNQSAIIVGMISSIVMFAVFIFNRNLSKKVNSSALRAASYDNLSDAL
                     VSIGTVIGVLGVYMGVPMLDTIAAIVIGLLIMKASIDIFKETAVTLTDGYDEEELTQI
                     QQIISSVPGIKEIRDIKARSHGVISFIDVTIAVNPKLNVIESHEISDHIESKLQARLG
                     EVETIVHIEPYLLNDVER"
BASE COUNT          374 a          203 c          169 g          339 t
ORIGIN      
        1 tataaccatt ataggtaaca ggttcaatcg catatattcc aaaaaagcaa gcgacttggt
       61 aacacttttt aaaataattt ctaactacaa tatatgaaac tctattagag aaatattaat
      121 tgattttaaa aatgatttaa taaacattga cttttataga tgtgaatttt taatatccta
      181 tctctctaca tcattcaata aataaggttc aatatgcaca attgtttcaa cttcacctag
      241 ccgtgcctgt aattttgatt caatatgatc agatatctca tgactttcga tgacatttaa
      301 tttggggttg acagctatag tgacgtcgat aaatgaaata acaccgtgac ttctcgcttt
      361 aatatcacga atctctttaa taccaggaac agatgaaata atttgttgta tttgtgtaag
      421 ctcttcctcg tcatacccat cagtaagtgt aacggccgtc tctttaaaaa tatcaatact
      481 tgctttcata atgagcaaac caatcacaat ggctgcaata gtatcgagca tcggcacgcc
      541 catataaacg cctaaaacgc cgatcactgt accaatcgac acaagcgcat ccgaaaggtt
      601 atcataactc gctgctctta aagcactgct attcactttt ttagaaaggt tacgattgaa
      661 aataaataca gcaaacataa caatacttga aatcataccg acaataatag cagattggtt
      721 tggctgaacg aattcgcctt ggtaaaaatg cttcacgcct gtaataatca cttgaatact
      781 gaccgcaaac ataatgaatg aagcaatgag tgatgcgata aattcagaac gataatgccc
      841 ataaggatga ttgttatcca caggtttcat agagatttga agtgcaatga gtatggcaat
      901 cgaactaatg acatctgttg cattgttaat tccgtctgcc actagacctt gactgctcgc
      961 caaccatccg tatgcaattt ttaataatgt taaaaatgta taagtaatga tgcttagtgt
     1021 tgcgcctttt ttagcttgag aaattttata ttctaattgc aacgaaaaca cctctaaaat
     1081 gaatt
//
LOCUS       DANHPA010000237         1068 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.249, whole genome shotgun sequence.
ACCESSION   DANHPA010000237 DANHPA010000000
VERSION     DANHPA010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1068)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.249"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            90..1019
                     /locus_tag="PTC28_002505"
                     /pseudo
     CDS             90..1019
                     /locus_tag="PTC28_002505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000135759.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
BASE COUNT          400 a          181 c          186 g          301 t
ORIGIN      
        1 tgtgtctgct gtgtcatctt gtcttttgtg attcctttcc attttctttt agtacactgt
       61 gattagtcgt tcataataat tctgatgcta tcgaaattga aaattcatta aacaaaggca
      121 tacaagagaa taaaaattat caccttgatg aagggttaga ttattattta aaatttggcg
      181 cattgataag ttaattgaaa gtacgataga aaatgaaaag tttcccaaaa tgtgagtact
      241 gtaattttac ggggatatcc ctatcaaaaa atcacattca tttttaaaac gagcgttaca
      301 aagagctgtg tatgatcgct taattcactt taatccgtgt gacggcattg aactcaaaca
      361 taaagattta aatgtgcctc aaaaagcgca tatttaccaa aagaacaaat caaaccattt
      421 ctggagatgg ttaaaaaaga gacattcatc aatactatat gtttagaaca atgattgaaa
      481 ctgcaatacg agttggtgaa gctaatgcac tgcattggtc tgattaccac agcaaagata
      541 aaacgttatc cattaccaag tcttatgacc aaaagcacga ccgatggaat acaacgaaaa
      601 acaaagaaca tagaacgatt tatattacta atgatttagc gaaagaatta actaaactga
      661 aatatcttca aaatgcgaat cgaatcgtta acgaagatgt ttataataca actcatgact
      721 ttatattctg taatgcattt ggtgacccgc ttccacgaag tacaacacac aataccatga
      781 tgcatgtgac ccgcaaataa ttaggaaaag aaaacaagtt gagcattcac aagttaggac
      841 atacgcatgc gacgctgttg ttagaaagtg atgtcccaat gaaagttatt caagaacggc
      901 tcggacataa aacgatggca gtcaccgagc aagtgtatag tcatgtgact gaaaaaatga
      961 atcataaggc aaaagagaac tttgaaaaat ttattaatga cagcaacctt tttggataag
     1021 tctgtaccca ctttgcaccc aattcacata aaaagcagaa actggtgc
//
LOCUS       DANHPA010000238         1055 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.250, whole genome shotgun sequence.
ACCESSION   DANHPA010000238 DANHPA010000000
VERSION     DANHPA010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1055)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.250"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..621
                     /locus_tag="PTC28_002506"
     CDS             <1..621
                     /locus_tag="PTC28_002506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011018369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2058)-N(6))-methyltransferase
                     Erm(B)"
                     /protein_id="HDK5717723.1"
                     /translation="KGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQD
                     ILQFQFPNKQRYKIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTL
                     GLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDKYWKLYTYFVSKWVN
                     REYRQLFTKNQFHQAMKHAKVNNLSTVTYEQVLSIFNSYLLFNGRK"
     gene            767..1051
                     /locus_tag="PTC28_002507"
     CDS             767..1051
                     /locus_tag="PTC28_002507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008787627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="topoisomerase DNA-binding C4 zinc finger
                     domain-containing protein"
                     /protein_id="HDK5717724.1"
                     /translation="MPTKRSGPLVGKCPKCGNNIVLKKSFYGCSNYPECKFTLAEHFR
                     KKKLTKTNVKELLEGKETLVKGIKNKEKKPYNAVVKIGEKGYIDFISFSK"
BASE COUNT          386 a          179 c          185 g          305 t
ORIGIN      
        1 aaagggcatt taacgacgaa actggctaaa ataagtaaac aggtaacgtc tattgaatta
       61 gacagtcatc tattcaactt atcgtcagaa aaattaaaac tgaatactcg tgtcacttta
      121 attcaccaag atattctaca gtttcaattc cctaacaaac agaggtataa aattgttggg
      181 aatattcctt accatttaag cacacaaatt attaaaaaag tggtttttga aagccgtgcg
      241 tctgacatct atctgattgt tgaagaagga ttctacaagc gtaccttgga tattcaccga
      301 acactagggt tgctcttgca cactcaagtc tcgattcagc aattgcttaa gctgccagcg
      361 gaatgctttc atcctaaacc aaaagtaaac agtgtcttaa taaaacttac ccgccatacc
      421 acagatgttc cagataaata ttggaagcta tatacgtact ttgtttcaaa atgggtcaat
      481 cgagaatatc gtcaactgtt tactaaaaat cagtttcatc aagcaatgaa acacgccaaa
      541 gtaaacaatt taagtaccgt tacttatgag caagtattgt ctatttttaa tagttatcta
      601 ttatttaacg ggaggaaata attctatgag tcgctttttt aaatttggaa agttacacgt
      661 tactaaaggg aatggagata aattattaga tatactactg acagcttcca agaagctaaa
      721 gaggtcccta gcgcctacgg ggaatttgta tcgataaggg gtacaaattc ccactaagcg
      781 ctcgggaccc cttgtaggaa aatgtcctaa gtgtggcaac aatattgtat taaaaaaatc
      841 gttttatggt tgttcaaatt atcctgaatg taagtttact ttagctgaac attttagaaa
      901 gaaaaaacta accaaaacga atgtaaaaga attactggag ggaaaagaaa ccctggtaaa
      961 aggaatcaaa aacaaagaga aaaagcccta caatgccgtt gtaaaaattg gggaaaaggg
     1021 atatattgat tttatctctt tttcaaaata aacat
//
LOCUS       DANHPA010000239         1054 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.251, whole genome shotgun sequence.
ACCESSION   DANHPA010000239 DANHPA010000000
VERSION     DANHPA010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.251"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..1024
                     /locus_tag="PTC28_002508"
     CDS             <1..1024
                     /locus_tag="PTC28_002508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HDK5717725.1"
                     /translation="KEKSHDYQIVWVNNKSFPFNDPNVKSVKRLSPAYFYYLSRAKFW
                     INNQNFPYYLTKPNQTTYIQTWHGTPLKKMLNDVPIFEGRDEGYKDRVNTSIQSWDYL
                     ISPSPYATKHFKSAFNFKKDILEIGYPRNDLFYNQDENFIAQKTKKIKQKLGIASDKK
                     IILYAPTFRDDEVSKSKKHIINLKMDLNKMKDQLGQEYILLLRPHIIISNAIYIEEHL
                     KDFVVNVADYNEISDLYLITDICITDYSSIMFDFANTSKPLLFFTYDYEHYKEHLRGF
                     YFDFKEMSPGPLLYNDNELINAIKNIDNINRTYANKYSAFYNEFCTFENGTSAQTIIN
                     RFFNVK"
BASE COUNT          411 a          172 c          139 g          332 t
ORIGIN      
        1 aaaagaaaaa tcacatgatt atcaaatcgt ttgggtcaat aacaagtcat ttccattcaa
       61 tgatccaaat gtaaaatcag taaagcgact gtcaccagca tatttttatt atttatcacg
      121 tgcaaaattt tggataaaca atcaaaactt cccttattat ttaactaaac ctaatcaaac
      181 gacatatata caaacttggc atggtacacc tttaaagaaa atgttgaatg atgttcccat
      241 ctttgagggg agagatgaag gatacaaaga tcgtgttaat acgtccatcc aaagttggga
      301 ctatttgata tcaccaagtc cttacgcaac caaacatttt aaatcagctt tcaactttaa
      361 aaaggacata ctagaaattg gatatcctag aaatgacctc ttttataatc aagatgaaaa
      421 ttttattgct caaaaaacaa aaaaaataaa acaaaaatta ggaatagcta gtgataaaaa
      481 aatcatttta tacgctccta cttttagaga tgatgaagtg agtaaatcaa aaaaacatat
      541 catcaattta aaaatggact taaataaaat gaaagatcaa ttaggtcaag aatatatttt
      601 gcttctgcga ccacacatca ttatcagcaa tgctatatac atcgaagaac atcttaagga
      661 ctttgttgtt aatgtggcag attacaacga gattagcgat ttgtacttga ttactgatat
      721 ttgtattact gattattcat ctatcatgtt tgacttcgca aatactagta aaccgcttct
      781 attttttact tatgattacg aacattataa agaacactta cgtggatttt actttgactt
      841 caaagaaatg tcacctggtc cacttcttta caacgacaat gaactgataa atgctattaa
      901 aaacatcgat aatattaaca gaacttacgc caataaatac agtgcttttt acaacgaatt
      961 ctgtacattt gaaaatggaa catccgcaca aacaattatt aaccgctttt ttaacgtaaa
     1021 atagtaatta attaataatt taatactgac attt
//
LOCUS       DANHPA010000240         1034 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.253, whole genome shotgun sequence.
ACCESSION   DANHPA010000240 DANHPA010000000
VERSION     DANHPA010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1034)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1034)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.253"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            26..583
                     /locus_tag="PTC28_002509"
     CDS             26..583
                     /locus_tag="PTC28_002509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDK5717726.1"
                     /translation="MKNIVFICGSLRKGSYNRIYMEKMMQQVPENWNIKEVSFKDVPV
                     YNFDLEGDQEPAAVTAFRDALGEADGIIIVTPEYNTGTPGPLKNAIDWASRIKNRGDR
                     SPLIDRPFAIAGCSPGATGSALSQAQLRQTLTAMNAHIMPGPKLIVGRVHELITEAGT
                     IEDERTIAYMKRFVNAFDAYVDRLN"
BASE COUNT          363 a          160 c          200 g          311 t
ORIGIN      
        1 aatgattatc taaaggagag ttaagatgaa aaatattgta tttatttgtg gtagcttgag
       61 aaaaggttct tacaaccgca tttatatgga gaaaatgatg caacaagttc ctgaaaattg
      121 gaatattaaa gaggtatcat ttaaagatgt tcccgtttac aactttgatc ttgaaggcga
      181 ccaagagcca gcagctgtaa cagcatttcg tgatgcatta ggcgaagcag acggcattat
      241 catcgttaca ccagagtaca atacaggtac accagggcca ttgaaaaatg cgattgactg
      301 ggcgtctcgt attaaaaata gaggggatcg ttccccatta atagaccgtc cgtttgcgat
      361 tgcgggttgt tcaccaggtg ctacaggatc agcgctgtca caagcacagt taagacagac
      421 attaacagcg atgaatgcgc acattatgcc agggcctaaa ttgattgttg gtcgcgttca
      481 tgagttaatt acagaagcag gaacaattga agatgaacgt acgattgctt acatgaaacg
      541 ttttgtgaat gcgttcgatg cgtatgttga ccgtttaaat taattaataa aaagttcatg
      601 gtagtgttga ctatcatgag cttttttaat tttgatgtta agcaagtctt taagagaatt
      661 gcgcattgac atcgaaatct ataaagataa cttgattaca ttattcagtt aatacgtcga
      721 aaaaaaaaga aaataaatat gctgacaatt aacgttttga ttacaaaatg atttaatttt
      781 tacatattgt caataaatgc acaacgattc aattagcgag ccttattaaa aataaacttc
      841 aaacaggcac cagatcaatt taaaatgaac atcgtcaact attttaacta ttggattttt
      901 aaaggaacat atgaaatgat ttgtgtcatt tgaagtaagt atcatgtcat atcaaggctt
      961 atcctcattt attagagtaa aaccagtggg ataaaaagta taccactttg ttcaacagtc
     1021 caatctataa aata
//
LOCUS       DANHPA010000241         1026 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.255, whole genome shotgun sequence.
ACCESSION   DANHPA010000241 DANHPA010000000
VERSION     DANHPA010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1026)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1026)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.255"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..962)
                     /locus_tag="PTC28_002510"
     CDS             complement(<1..962)
                     /locus_tag="PTC28_002510"
                     /inference="COORDINATES: protein motif:HMM:TIGR02276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HDK5717727.1"
                     /translation="MKEKFIYVTNTDSNDISVISSKHGKELTRIPVGGSPRGSMALHK
                     SLPYGYVCNCAGNTISKIDLINNKEHSKITVGLAPRGVCVDPIKEIIYVSNSGSNDVS
                     IISTENDVEIFRIKVGDNPRFLSISSDGKYLSVPCSGSDNVYIIELAENVLDSKISSI
                     VELGENARPYHAFTHKNYNVYTANTHRHTVSVVDLYKKMLTSEIPVGYGPRAVIADPW
                     KDIVYVSCEASNSVSVVDINKNEEIKHIDVGPTPRGLKIDENSKILYVSAFKRTMLSK
                     YFQDGDGLSVVDLKSLERKSYIKAGLGPCSVSIYEPSLETLINT"
BASE COUNT          325 a          212 c          126 g          363 t
ORIGIN      
        1 taagtattaa ttagcgtttc taaacttggt tcatatatag aaacactaca aggacccaat
       61 cccgctttga tataactttt tctttctaaa ctttttaaat ctaccactga caacccatcg
      121 ccatcttgaa aatatttact aagcatcgtt cgtttaaacg ctgaaacata tagaattttg
      181 ctattttcat cgatcttaag acctcttggt gttggaccaa cgtctatatg ctttatttct
      241 tcattcttat ttatatcaac cacacttact gaattcgaag cttcacagct tacatataca
      301 atatctttcc agggatctgc tataacagct cttggaccat accccactgg tatttcacta
      361 gtcaacatct ttttatacaa atcgacaaca ctcactgtat gtctatgagt atttgcagta
      421 taaacattat aatttttatg tgtaaaagca tgatatggtc tagcattttc tcctaattca
      481 actatcgaac taattttgga atctaaaaca ttctcagcaa gttcaataat ataaacattg
      541 tctgatccag aacaaggcac acttaaatat ttcccatccg aagatataga taagaatcta
      601 ggattatcac cgaccttaat acgaaaaatc tctacatcgt tttcggttga aataatggag
      661 acatcatttg acccagagtt agaaacatat ataatctctt ttataggatc gacacatact
      721 cctctagggg ctaatcccac tgtgatttta ctatgttctt tgttatttat aagatcaatt
      781 tttgagattg tattacctgc acaattacaa acatacccgt atggtaaact tttatgtaaa
      841 gccatgctcc ctctcggact ccctcctaca ggaattctag ttaactcttt tccgtgttta
      901 ctactaatta cagaaatgtc atttgaatcg gtatttgtta cataaataaa tttttctttc
      961 atgaaatccc cccttactac atgtacttta tttatacact gaattttctg aaaagtaaac
     1021 catcat
//
LOCUS       DANHPA010000242         1006 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.256, whole genome shotgun sequence.
ACCESSION   DANHPA010000242 DANHPA010000000
VERSION     DANHPA010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.256"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            20..527
                     /locus_tag="PTC28_002511"
                     /pseudo
     CDS             20..527
                     /locus_tag="PTC28_002511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002510522.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
     gene            complement(717..947)
                     /locus_tag="PTC28_002512"
     CDS             complement(717..947)
                     /locus_tag="PTC28_002512"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717728.1"
                     /translation="MEFNGWNIVVEYKDDYEILKNDTSVVILDKDNDIAALIKEVNNE
                     LKIAKSGYSNTYTINAEEKKLTIEITNLFEED"
BASE COUNT          347 a          161 c          152 g          346 t
ORIGIN      
        1 tgattcttag acgtcttata tagtgattat tgaaagaaaa caaaaatgga ttttagagag
       61 aaaaccgtca caataccaat atgatgacgg acttatggat atgtcaatct gtacagaatc
      121 gtggtttgaa gatttggtga aaaaacatca tgaattaatc gaaaaggatg acatgtatat
      181 tttcgctata tttaataaaa atcagcaaca tatcggcatg attgatatcg tcaccattcg
      241 ccgcggaaac tttcaatggg ctgagcgtgg ttactttatt cataatcaac attggagaaa
      301 gggatacgcc tacgaagcat taagcaaaac tttgcatatt tctgataaag cacatggatt
      361 tcatcgactg gaggaacacg tgaacttaga taatcaccct caatccagct gttagaaaaa
      421 acaggttttg aacttgaatg tactcgaaaa actttatata cgaatttgat gagtggactg
      481 ataaccatat ttatttcatt aactttgatc atagtgtaag agattgattt ggaataaagc
      541 ggaaagaatt taaaacatga gatattttca aagcgccata aaacaacatg ttcaaaccac
      601 tattggtgct acttaacaga tttatactac atcaatattt tatttatgaa aaaacgccct
      661 ttaaagttca cattttgaca tgttactttg aagggcaaca tttaatgtat gattacctaa
      721 tcttcttcaa acagattagt aatttcaatt gtcagcttct tttcttcagc attgatcgta
      781 tacgtattac tatatccact tttggcaatt ttaagttcat tgttaacttc tttaattaac
      841 gcagctatat cgttgtcttt atctaaaata acaacagacg tatcattctt tagtatttca
      901 tagtcatctt tatattcgac tacaatattc caaccattaa attccaatac attcaccttc
      961 ttttattgaa tttattattt tatctgggta ttaatgttaa attcta
//
LOCUS       DANHPA010000243          995 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.257, whole genome shotgun sequence.
ACCESSION   DANHPA010000243 DANHPA010000000
VERSION     DANHPA010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 995)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 995)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..995
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.257"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..517
                     /locus_tag="PTC28_002513"
     CDS             <1..517
                     /locus_tag="PTC28_002513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717729.1"
                     /translation="HKLIGFMKPSDIDVGYHVDEDVHLLQGAELYLESRLKTKAENIS
                     EKDDFTLKLVFPERGIGKVERKNQVYWIELNHVVEHQLERVFHSLQDYSSTENVEIND
                     IIHNFLAERKKAKNILTALVNDKINNESNTNPNQIEGKSNIYTRYQNLKNSKLGKLQI
                     KYWNMRKKWGK"
     gene            519..>995
                     /locus_tag="PTC28_002514"
     CDS             519..>995
                     /locus_tag="PTC28_002514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HDK5717730.1"
                     /translation="MSKKPQTKNDQLIEAVSLLQTDYLQGLSRLEETINASDVYTYLK
                     SLEKNGKLNFINQFKNELEKEKSSNGSRILKKAKYKIGIIADEFLFNSFKDTADITFI
                     SSDAEIEKLSFDFVIVATTWRGIDETWQGVASPKSRMRAHLMLLLDELIERQIPLVF"
BASE COUNT          399 a          128 c          189 g          279 t
ORIGIN      
        1 acataaatta atcggcttta tgaaaccatc tgacatagat gtaggatatc atgtggacga
       61 ggatgtgcac ttattacaag gtgcagaatt gtatttagaa agtcgtctta aaacaaaagc
      121 cgaaaacatc agcgagaaag atgactttac attgaaatta gtgtttccag aaagaggaat
      181 tggtaaggta gagagaaaaa atcaagtgta ttggattgaa ttaaatcatg tagtagagca
      241 tcaacttgaa cgtgtatttc attcattgca agattatagt tcaacagaaa atgtggagat
      301 aaacgatatt attcataatt ttttagcgga aagaaaaaag gctaaaaata tattaactgc
      361 attagtcaat gacaagatta ataatgaatc gaacactaac cctaatcaaa ttgagggtaa
      421 aagtaatatc tatacacgat atcaaaattt aaaaaactca aaactaggta aactgcagat
      481 taaatattgg aatatgagaa aaaaatgggg gaagtaacat gtcaaaaaaa cctcaaacga
      541 agaacgacca actgattgaa gcggtcagtt tactgcaaac tgactattta caaggtttaa
      601 gtcgattaga agaaacaatc aatgcaagtg atgtttatac gtatttaaaa tcattagaaa
      661 aaaatggcaa gttgaatttt atcaatcagt ttaaaaatga attagaaaaa gaaaaatcta
      721 gtaacggttc gcgaattttg aaaaaagcca agtataaaat tggaatcatt gccgatgagt
      781 tcttattcaa ttcatttaaa gatacagcgg atattacttt tatttcgagt gacgcagaga
      841 ttgaaaaact gagctttgat tttgttatcg tggcaacgac atggcgagga attgatgaaa
      901 cttggcaagg tgtagcaagc cctaaaagta gaatgcgtgc acatcttatg ctgttattag
      961 atgaattaat cgaacgtcaa attccattag tattc
//
LOCUS       DANHPA010000244          974 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.258, whole genome shotgun sequence.
ACCESSION   DANHPA010000244 DANHPA010000000
VERSION     DANHPA010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 974)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 974)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..974
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.258"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(141..518)
                     /locus_tag="PTC28_002515"
     CDS             complement(141..518)
                     /locus_tag="PTC28_002515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HDK5717731.1"
                     /translation="MRYLLLGIGGIFTLLGFAGAVLPLLPTTPFLLVAVLCFAKSSDR
                     FHDWLIQTKVYQAYVEDFRKYRGYTMKKKIQLLISLYIVVGFSIWMVDVTMIRLGLLV
                     MVVIQTVVLFTWVKTLPKSYDMR"
BASE COUNT          334 a          196 c          147 g          297 t
ORIGIN      
        1 ttatattttc aaccgtggca aacccaatat taaaaaatga ccccttaacc tagcaactcg
       61 ataaaaaaag cagaaacgac acgtcactat aacgtgcaat ttctacttca tcaaatcgta
      121 ttcagtttaa catacatatg ttatcgcata tcataacttt ttggtaaagt ctttacccat
      181 gtaaataaga ccaccgtttg tattacaacc ataaccaata atcctaggcg aatcattgtc
      241 acatccacca tccaaatcga gaatcccact acaatgtata aactaattaa taattgtatt
      301 ttctttttca tcgtatagcc acgatattta cgaaaatctt caacgtaagc ttgatacact
      361 tttgtttgta taagccaatc atgaaaacga tcggaactct tcgcaaaaca gagtacagcg
      421 acaagtaaaa aaggcgttgt aggcaataat ggtaaaacgg cgcctgcaaa acctaataat
      481 gtaaagatac cccctatgcc cagtaaaaga tatcgcatta tcctatactc ctttatttat
      541 aataaatttg cgttcatgct tggtgtcgaa cttttatctc taaaactatc ataacgactc
      601 ttttacaaaa aaacaatcgt cttttcagag atgcgaccgt cctatacatc acttcgacgt
      661 tcagttattg cttgttgtgc gattttagta tacgccatgt cctgcatggg taatcttaaa
      721 gttgattttt tgaagtgaaa cactgttaaa aagctgtaaa aaagagattt agccattttc
      781 gatttttcaa atttgtgaga tttaaatatt aacggtatca aaaacggtat caccccacct
      841 attgcaggcg gggtgtttcc ataaaaaata ccacaccgtg agggtgtggt gagtaaatag
      901 gcaaccatcg caacagttag ctcctcacgc tataactgag taaattatag agtagatcgt
      961 ttatcaatat tata
//
LOCUS       DANHPA010000245          965 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.259, whole genome shotgun sequence.
ACCESSION   DANHPA010000245 DANHPA010000000
VERSION     DANHPA010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 965)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 965)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.259"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            170..301
                     /locus_tag="PTC28_002516"
     CDS             170..301
                     /locus_tag="PTC28_002516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020361779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="subtilosin A family bacteriocin"
                     /protein_id="HDK5717732.1"
                     /translation="MEKGIMVSNKGCSTCSIGAACLIDGPLPDFEVMGITGIFGLTS"
     gene            379..>965
                     /locus_tag="PTC28_002517"
     CDS             379..>965
                     /locus_tag="PTC28_002517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020361780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HDK5717733.1"
                     /translation="MNQYIFFNDNARLHQLPHGGVIEVKNGMFKDEVFDFEYLDLNSS
                     AFEACTYFDGSMTIIDILKDMCQKYKCDINDHIEWYTNLVNDLYKKNLINLVSNPVKK
                     NLNISGSTEYITPLHPVFEITHKCNLKCAHCYLESSPQVQDTLSLDEFIMIANNMYEN
                     GILTCEITGGEVFVHPNAKEILEFALKKFKKVGILT"
BASE COUNT          337 a          134 c          166 g          328 t
ORIGIN      
        1 cctttttctt tgataatctc tttaatccct agcaactcta ccataacaat ccccccttta
       61 taaaaaatta taccatttaa attactttta gtaacatgcg ttacaaaact tttgaataat
      121 ttatattaaa atgtgtttgt agttaaataa aataaagggg gataccaaaa tggaaaaagg
      181 cattatggta agtaacaagg gttgttcgac ttgttcaatt ggagctgctt gtcttattga
      241 tgggccatta cctgacttcg aagtcatggg aattactgga atttttggac taacttctta
      301 gcactgtttg tatgccggca aaatgatagg atttatcata gtttgtcggc gtacttttta
      361 ttaagggggg ggatagaaat gaatcaatat atatttttta atgacaatgc taggttgcat
      421 caattacctc atggtggagt aattgaggtg aaaaatggca tgtttaaaga tgaagtgttc
      481 gactttgaat atttagattt aaattcttct gctttcgagg catgtacgta ttttgatggt
      541 tccatgacaa taatagatat tttaaaagat atgtgccaaa aatataaatg tgatattaac
      601 gatcacatag aatggtatac aaatctagtt aacgatttgt ataagaaaaa tcttattaat
      661 ctcgttagta atcctgttaa aaaaaacctt aatattagcg gatcaactga atatattaca
      721 ccactacatc cggtgtttga aattacacat aaatgtaatt taaaatgcgc acattgttat
      781 ctagagtctt cacctcaagt tcaagatacg ctttcattag atgaatttat aatgattgca
      841 aataatatgt atgaaaatgg aattctaaca tgtgagatca ctggtggaga agtgtttgta
      901 catccaaacg caaaagaaat attagaattt gcactcaaaa agttcaaaaa agtcggtatc
      961 ttaac
//
LOCUS       DANHPA010000246          952 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.261, whole genome shotgun sequence.
ACCESSION   DANHPA010000246 DANHPA010000000
VERSION     DANHPA010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 952)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 952)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.261"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..656
                     /locus_tag="PTC28_002518"
     CDS             <1..656
                     /locus_tag="PTC28_002518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020361780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SPASM domain-containing protein"
                     /protein_id="HDK5717734.1"
                     /translation="EKHDNFRGKKNSFNQTCKTIKKLSENGLFVRVGMSIYEDNMWEI
                     NDMANLVRKLGASAFSYNWIDDFGRGKKMNQLKLNKLNNLSFAEFEVDVVKNNRDIIP
                     LVPLTKNKANNCGAGWRSIVMDPNGNIRPCALFPKEFVIGNLKEQSYKDVFSSEIVNR
                     LYSLQSPQKSKFCSDECSFKDYCAGCYLKGLNSNKNHRTNYCGWVKNQKLENLVEQI"
     gene            670..843
                     /locus_tag="PTC28_002519"
     CDS             670..843
                     /locus_tag="PTC28_002519"
                     /inference="COORDINATES: protein motif:HMM:NF015674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF308 domain-containing protein"
                     /protein_id="HDK5717735.1"
                     /translation="MKRDLITITIAIIFLISSVIFAIKQEWVFAVIFILIGIIYILKT
                     FKRGKSNDEHSSK"
BASE COUNT          368 a          127 c          170 g          287 t
ORIGIN      
        1 ctgaaaagca cgataatttt cgtggcaaaa aaaattcatt taatcagact tgtaaaacca
       61 ttaaaaaact ttctgaaaat gggctttttg taagggtcgg aatgtctatt tatgaggata
      121 atatgtggga aatcaatgat atggcgaatt tagtaagaaa actaggagct tcagcctttt
      181 cttataactg gatagatgac tttggtagag gtaaaaaaat gaatcagttg aaattgaata
      241 aactaaacaa cttgtctttt gctgaatttg aagtggacgt tgttaaaaat aatagggaca
      301 ttataccatt agttcctcta actaaaaaca aagccaataa ttgtggggct ggctggcgtt
      361 caatagtcat ggatcctaat ggaaatattc ggccgtgtgc actatttcca aaagaatttg
      421 taatcggtaa cttaaaagaa cagtcatata aagacgtttt ctcctcagaa atagtaaatc
      481 gattatactc tctgcagtct ccacaaaaaa gtaaattttg cagtgatgaa tgcagcttca
      541 aagactactg cgctggctgt tacttaaaag gtcttaatag taacaaaaac catcggacga
      601 attactgcgg ttgggttaaa aaccaaaaat tagaaaactt agtagaacaa atataaaagg
      661 agataaaaca tgaaaagaga cttaattaca ataaccattg ctataatttt tttaatatct
      721 agtgtaatat tcgccattaa gcaagaatgg gttttcgcag taatcttcat attgataggg
      781 attatctata tattaaaaac atttaaaaga ggtaaatcta atgatgagca ttcatctaaa
      841 taacttatgt atttggtatg agccagaaaa tttaataatt aaaaatgcaa atctatactt
      901 acaaaaagga aaaatttatg gattgcttgg aaagaatgga tctggtaaaa ca
//
LOCUS       DANHPA010000247          935 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.263, whole genome shotgun sequence.
ACCESSION   DANHPA010000247 DANHPA010000000
VERSION     DANHPA010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 935)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 935)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.263"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..102)
                     /locus_tag="PTC28_002520"
     CDS             complement(<1..102)
                     /locus_tag="PTC28_002520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001059082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HDK5717736.1"
                     /translation="MNNGTVKWFNAEKGFGFIERENGDDVFVHFSAIV"
BASE COUNT          315 a          136 c          158 g          326 t
ORIGIN      
        1 aacgattgct gagaaatgta caaatacatc gtcgccgttt tctctttcaa taaatccaaa
       61 acctttttct gcgttaaacc attttactgt accgttattc atatagaata cctccacgtg
      121 cttttgcaca aatatttgca ataaattcat tgattaaaaa agaggatatt ctaaacaaat
      181 acactacatt taaattcaag ttcttttatt acgataacct aactatacgc ttttgtttgc
      241 ataaagtaaa gcattattat ttttcatttc ttgaaaatag caacataaaa cacctttgaa
      301 gtctggcgca cgtaagcacg aaaaaattta aaaaaagatg gaattaagaa cttttgtcag
      361 cggattttca tgtttttgat tgtggctggt cgtgaaaata aaacagaatg ataaaaagag
      421 caagtgcaca atagcgatat ggacaatgga gtttttgcgc agtatattta aaataaagat
      481 agagagagat ttttgtgagg gatgcgttcc ttaataaatg tcggaatatt tttaaattta
      541 tttgagtatc gcataagatg gctagccaaa gcgggtactt tgaattttac agacttactg
      601 attgagttga ttcgaatgcg caggggatca tgcatttaaa aatcatttta cattaattgt
      661 aagggaatga aacaaatgaa cattttaatg ggaatcttat tatcactatt tatttttgtc
      721 acaggtgttc tctttatgaa atttaacagc acgttttgga ataatccact gttactcatt
      781 tttaaaaata gaaatgatgt gaatcaaata acgggaaaat cgttcatagc tatgagtcta
      841 ttgtatttca tcattgctat cctatatcat ccgacgatat cgagtatggt tgtattgtac
      901 ttagttttag ccctcattga tttcattgtc gttgg
//
LOCUS       DANHPA010000248          905 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.265, whole genome shotgun sequence.
ACCESSION   DANHPA010000248 DANHPA010000000
VERSION     DANHPA010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 905)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 905)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.265"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
BASE COUNT          296 a          166 c          105 g          338 t
ORIGIN      
        1 cggaatactt ttagcaaaaa acaccactct tattgtagtg tagttaaaat aattgcttgc
       61 ttaaattatc gaaaattgat tttgtctctt tatacatttc aagtttcaat tcagccaaat
      121 cactaataat cctcctgtta actagactgc aataaatagt actgacttta tgtcatctaa
      181 tgaacgacgg attatgatgt agatttacct ccttacaatg atgctcatta aattcataat
      241 cataaattaa atgctttcta gactcataga taattttgaa atagataagt atgatcacaa
      301 tgaaatcgac tattttcgca gccaatgatt aaccatgctc ttgttttata agctatttga
      361 aattttttgt atcataataa ggcaacttta tactaaaaat tgttcttata tagtcctgag
      421 gcggtaaaac gcacttaccc actctctcat caatgtattc aaattcatct aaatacatat
      481 catatctata gtcgtataac ctaacattac ttgcatcttg ttttatgact tcgagtaaaa
      541 gtgtttgatc acctcgttcg tttgaattta aaccttctcg tctttttatc catgtaattt
      601 cttcgtaagc tttgtctctt aaagccctag ttgcatattt accatactga tagattgtgt
      661 gctcgataat ctacacttcc atatcactaa taaaatctct acaattatta tcttcaataa
      721 gaaaacaaat aatcctctta atgatgataa aaccgggcca tgtacccaat cttcaaattg
      781 ttcgtcaatg ataggtttcc cattttatac taaagatgtt tcctgaacat aatatataag
      841 attatgtact ttcatttcgt cacctagtat actactcctc ttaatttctt gatatttgaa
      901 attaa
//
LOCUS       DANHPA010000249          892 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.266, whole genome shotgun sequence.
ACCESSION   DANHPA010000249 DANHPA010000000
VERSION     DANHPA010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 892)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 892)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.266"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(200..272)
                     /locus_tag="PTC28_002521"
     tRNA            complement(200..272)
                     /locus_tag="PTC28_002521"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(237..239),aa:Lys,seq:ttt)
     gene            complement(276..350)
                     /locus_tag="PTC28_002522"
     tRNA            complement(276..350)
                     /locus_tag="PTC28_002522"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(316..318),aa:Gln,seq:ttg)
     gene            complement(355..438)
                     /locus_tag="PTC28_002523"
     tRNA            complement(355..438)
                     /locus_tag="PTC28_002523"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(402..404),aa:Tyr,seq:gta)
     gene            complement(459..534)
                     /locus_tag="PTC28_002524"
     tRNA            complement(459..534)
                     /locus_tag="PTC28_002524"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(499..501),aa:Val,seq:tac)
     gene            complement(544..615)
                     /locus_tag="PTC28_002525"
     tRNA            complement(544..615)
                     /locus_tag="PTC28_002525"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(580..582),aa:Glu,seq:ttc)
     gene            complement(617..691)
                     /locus_tag="PTC28_002526"
     tRNA            complement(617..691)
                     /locus_tag="PTC28_002526"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(657..659),aa:Asn,seq:gtt)
     gene            complement(701..815)
                     /gene="rrf"
                     /locus_tag="PTC28_002527"
     rRNA            complement(701..815)
                     /gene="rrf"
                     /locus_tag="PTC28_002527"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT          246 a          208 c          216 g          222 t
ORIGIN      
        1 aactataaac tatgtgtacg acgattggat atgaatgaaa ctgtagattt tattcatttt
       61 aaattttgtt agaaaaagag caccgagctg agcggtgttc gagatgcacg tactggatgt
      121 ggcgttgcta atagcaggag gagaaaaggg ctagaaccca aaataaaaac cctatcccat
      181 ttggaataag gtttgaaagt gagccataga ggattcgaac ctctgaccct ctgattaaaa
      241 gtcagatgct ctaccaactg agctaatggc tcttatggct gggctagctg gattcgaacc
      301 agcgagtgac ggagtcaaag tccgttgcct taccgcttgg ctatagccca tcgatggtgg
      361 aggggggcag attcgaactg ccgaacccga aggagcggat ttacagtccg ccgcgtttag
      421 ccacttcgct acccctccga tatgtatgca attaaaaatg gtggagaatg acgggttcga
      481 accgccgacc ctctgcttgt aaggcagatg ctctcccagc tgagctaatt ctccatatat
      541 caatgacccc tacgggactc gaacccgtgt taccgccgtg aaagggcggt gtcttaaccg
      601 cttgaccaag gggccatggc tccacaggta ggactcgaac ctacgaccga tcggttaaca
      661 gccgatagct ctaccactga gctactgtgg atcaatctta acctggcacc gtcctactct
      721 cgcggaacgt aagtccgact accatcggcg ctaaagagct taacttctgt gttcggcatg
      781 ggaacaggtg tgacctcttt gccattggca ccagattaag ttgttgaatg ttatacattc
      841 aaaactagat agtaagtata tttatcacaa gcattacctt atgaacaatt at
//
LOCUS       DANHPA010000250          889 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.267, whole genome shotgun sequence.
ACCESSION   DANHPA010000250 DANHPA010000000
VERSION     DANHPA010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 889)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 889)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..889
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.267"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            57..746
                     /locus_tag="PTC28_002528"
     CDS             57..746
                     /locus_tag="PTC28_002528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014532914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717737.1"
                     /translation="MADAAEVLTKKNIENENIQIKDNHVHVNSYSTSDSNIVENNYNS
                     KDLTIESRLEHNEGTDTITADASLKDKYGNDIDKTFDIKFTRLVNENDFSAEFIDKTT
                     GDKIVYDTHKVNASVWPVVGVLVGYLAKHSIKLAIKKYGKNVVTSMIRTSPKVAVEAA
                     KKLGYSPTKSYSHGKKVFERNKRGNPMYITPDADNHSGGAWKGASSIKKLGNKKTRSG
                     TYDANLKRIGD"
BASE COUNT          348 a          116 c          163 g          262 t
ORIGIN      
        1 aatttaaaat tttagctagt atattagcat ttgttgtaac atttatatac ggaggtatcg
       61 ctgatgcagc agaagtatta actaagaaga atatagagaa tgaaaacata caaataaaag
      121 ataatcatgt tcatgttaat tcgtactcaa catccgactc taatatagtt gaaaataatt
      181 acaattctaa agatttaaca attgaaagta gactagaaca taatgaaggc actgatacta
      241 ttacggccga tgccagtttg aaagataaat acggcaacga tattgacaaa acttttgata
      301 tcaaatttac tagattagtt aacgaaaatg atttctctgc tgaatttatt gacaaaacca
      361 caggtgataa gattgtatat gatacacata aagtcaatgc ttctgtttgg ccagttgttg
      421 gtgttttagt tgggtattta gctaagcata gtataaaact tgctataaaa aagtatggta
      481 aaaatgttgt aacatctatg attcgtacaa gcccaaaggt tgctgttgaa gctgctaaaa
      541 agttaggtta ttcgccaaca aaatcttatt cccacggtaa aaaagtgttt gaaagaaata
      601 aacgaggtaa cccaatgtat ataactcccg acgccgataa ccatagtggt ggagcttgga
      661 aaggagctag tagtattaag aaattgggca ataaaaaaac gcgtagtggc acatatgatg
      721 ctaatttgaa gagaattgga gattaataat ggatattaaa ctaaaaaatc tagtaattca
      781 attcgactta aacagtgaaa gtccttattt tcaagttgaa gataattaca aaataagatg
      841 ggatattaac tcgattcaaa agagagacct tgcagaaata atgagatta
//
LOCUS       DANHPA010000251          883 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.268, whole genome shotgun sequence.
ACCESSION   DANHPA010000251 DANHPA010000000
VERSION     DANHPA010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..883
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.268"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..737)
                     /locus_tag="PTC28_002529"
     CDS             complement(<1..737)
                     /locus_tag="PTC28_002529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HDK5717738.1"
                     /translation="MPSTEESTQSKVNFNNTDNYGDFFPHVESVIGTDERKKVTSFTS
                     SPIKENVAIKVEWKNSEGNYEGYVASGVMVSKDTVLTAAHVVYDEGRKKIAERITVYS
                     GLYGNIIRGSAKGIKTYVLKGYTSTLDSKYDLAAIKLDTNLGSLTGSLGITSTIALGD
                     KIATAGYPDDKTDRTNSSDLKYYMWRSTGKIMNLDKYRVYYDADTSGGQSGSGVWDVK
                     SNKLVAIHTNGGKTFNFGTRITPQYLD"
BASE COUNT          265 a          186 c          113 g          319 t
ORIGIN      
        1 taatctagat attgtggagt aatccttgtt ccaaaattaa atgttttacc tccgtttgta
       61 tgaattgcca caagcttgtt gcttttaaca tcccatacac cactaccact ttgtcctcca
      121 gatgtatcgg catcataata aactctatat ttatccaaat tcattatttt accagtagat
      181 cgccacatat aatattttaa atcactactg tttgttcgat cggtcttatc atcaggataa
      241 cctgctgttg caattttatc ccctaaagca atagtagatg ttatccccaa cgagcctgtt
      301 aaactaccta aatttgtatc tagttttata gccgctaaat catatttact atctagtgta
      361 ctggtataac ctttaagtac atacgttttt ataccttttg cagaacctcg aatgatattt
      421 ccatataacc cactgtatac agttattctt tctgcaatct tttttcttcc ctcatcatat
      481 acaacatgag ctgcagttag cacagtatct ttactaacca ttacaccaga tgcaacatat
      541 ccttcgtaat ttccctctga attcttccat tcaactttta tagcgacatt ctctttaata
      601 ggagacgaag taaatgaagt gactttcttc ctttcgtcag taccgataac actttcgaca
      661 tgaggaaaaa aatctccgta gttatcggta ttattaaaat taactttact ttgtgttgat
      721 tcttctgtac taggcattgg taatatatct cctggcatag cagaaatatc cgtagcttgt
      781 gactcaataa ttccatcatc agctatgaat tcttctgcat ttacatatga cggagtatac
      841 atactaagaa ataatacaat aaaaacaagt tttgtcacct ttt
//
LOCUS       DANHPA010000252          851 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.269, whole genome shotgun sequence.
ACCESSION   DANHPA010000252 DANHPA010000000
VERSION     DANHPA010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 851)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 851)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.269"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..830)
                     /locus_tag="PTC28_002530"
     CDS             complement(<1..830)
                     /locus_tag="PTC28_002530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001802837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HDK5717739.1"
                     /translation="MLYIKYTQNIMSHKIWLLVLVSTLIPLIPFYKISNFTFSKDMMN
                     RNVSDTTSSVSHMLDGQQSSVTKDLAINVNQFETSNITYMILLIWVFGSLLCLFYMIK
                     AFRQIDVIKSSSLESSYLNERLKVCQSKMQFYKKHITISYSSNIDNPMVFGLVKSQIV
                     LPTVVVETMNDKEIEYIILHELSHVKSHDLIFNQLYVVFKMIFWFNPALYISKTMMDN
                     DCEKVCDRNVLKILNRHEHIRYGESILKCSILKSQHINNVAAQYLLGFNSNIKERVKY
                     "
BASE COUNT          302 a          132 c          113 g          304 t
ORIGIN      
        1 atatacttaa cacgttcttt aatatttgaa ttaaaaccta gtaaatattg tgctgccaca
       61 ttatttatgt gctgagattt taaaatagag cattttaata tcgattcacc ataacgtata
      121 tgttcatggc gattcaaaat ttttaaaacg tttctatcac atactttttc acagtcattg
      181 tccatcattg ttttacttat atatagtgca ggattaaacc agaatatcat tttaaaaaca
      241 acataaagct ggttgaatat taagtcatga cttttcacat gtgatagttc atgtagaata
      301 atatattcaa tttctttgtc attcatggtt tcgactacga cagttggtag tacaatttgg
      361 gatttcacta aaccaaatac catcggatta tcaatgtttg aactataact aattgttata
      421 tgctttttgt agaactgcat cttactttga catactttaa gtcgttcatt aagatatgac
      481 gattccaatg acgaactttt aataacatca atttgtcgga atgccttaat catataaaat
      541 aagcacaaca aactaccaaa tacccatatc aaaagaatca tatacgttat atttgaggtc
      601 tcaaactgat taacattaat tgctaagtct ttcgtaacag atgattgttg accatctaac
      661 atatgactaa ccgaagaagt cgtgtcagat acatttcgat tcatcatatc ttttgaaaat
      721 gtaaaattcg atattttgta aaatggtatt aatggaatta acgtggagac gagcactaat
      781 aaccaaatct tatgtgacat aatattttga gtatatttta tatagagcat tctcactaaa
      841 aaaattacac a
//
LOCUS       DANHPA010000253          846 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.270, whole genome shotgun sequence.
ACCESSION   DANHPA010000253 DANHPA010000000
VERSION     DANHPA010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 846)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.270"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            114..794
                     /locus_tag="PTC28_002531"
     CDS             114..794
                     /locus_tag="PTC28_002531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDK5717740.1"
                     /translation="MYKKLFYSKISELKKNGNYREFTEVNRVSSKYPLAKGEYGQEII
                     VFCSNNYLGNSQDKSVIESMAKGIGIIGGYIAGERGMIDVIRSYSSGFIFTTALPPAI
                     VAGCLQSIKVVRKRDDLISALHTNTKRLREKLKANGIEVLKDSTTHILPVIIGDSQKC
                     KEAAKMLFETFNIYVQAINAPTVKKGTERFRINVTPNHTAEQIDLLVSSIVFVFDQLN
                     IKRSVLVK"
BASE COUNT          304 a          110 c          165 g          267 t
ORIGIN      
        1 ataaagtggt acaaaaaaac aaagtcttaa ataagaaggc ataaatataa tcgtgtcttt
       61 gttatactat tggtttcatt taaagactca tacataaagc gaaggggaaa actatgtaca
      121 agaaattatt ctattctaag atttcggaat tgaaaaaaaa tggtaattac agagaattca
      181 cggaagtaaa ccgggtttct tctaagtatc cattagcgaa aggtgagtat ggacaagaaa
      241 ttatagtatt ttgcagtaat aattatttag gaaattcgca agataaaagc gtcatagaat
      301 ctatggctaa aggtattggt ataattggtg ggtatatagc tggagagaga gggatgattg
      361 acgttattag atcatattcg tcgggcttta tttttactac tgctcttcct ccagcaatag
      421 tagctggctg ccttcaaagt attaaagttg taagaaagag ggatgattta ataagtgcat
      481 tacacactaa tacgaagaga cttagagaaa aacttaaagc caatggcatc gaggtgttga
      541 aagacagtac tacacacatt ctcccagtaa taataggaga ttctcaaaaa tgcaaagagg
      601 ccgctaaaat gctatttgaa actttcaata tttatgtaca ggcaataaat gcacctaccg
      661 ttaagaaagg gacggaacgt tttagaatta acgttacgcc taatcataca gctgaacaaa
      721 tagatctttt agtttcttcc attgtttttg tttttgatca actaaatatt aaacgtagtg
      781 tattagtaaa atgaattatt tgatgtattt gttttgcatg tttatatggg gattgaattt
      841 tattgc
//
LOCUS       DANHPA010000254          810 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.272, whole genome shotgun sequence.
ACCESSION   DANHPA010000254 DANHPA010000000
VERSION     DANHPA010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 810)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 810)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.272"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            186..563
                     /locus_tag="PTC28_002532"
     CDS             186..563
                     /locus_tag="PTC28_002532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3899 domain-containing protein"
                     /protein_id="HDK5717741.1"
                     /translation="MKYLNNNALIYILFTPVASLIIWLFSTHTFTQLVNIFFTISILV
                     GILLFTLLVVQEGILDVTSYGFRKFRYQMMRKKNRSRLEDDEFFNPKAPKKAHHFVSP
                     WIKPALIMQLVYFLLAIIIAYLI"
BASE COUNT          268 a          132 c          123 g          287 t
ORIGIN      
        1 ccattataga cttttcataa aatttaatca ataacatttt gatttaactc aacaaagttt
       61 tagaaatttt agctttatac ctactcttta gacaggatat caatttttaa tgaactaaga
      121 ataagatgtc aaataggact atttccgtta caatatggga gtaaatacaa aaaaggactg
      181 aaacgatgaa atacttaaac aacaatgcgt taatctatat cttattcaca cctgtcgcaa
      241 gccttatcat ttggctcttt tcgacacaca cttttacaca attagtgaac atctttttta
      301 ctatatctat tttagtgggc attttattgt tcacactatt ggtcgtgcaa gaagggatac
      361 tcgatgtaac aagctatggt ttcagaaagt tccgctacca aatgatgcgt aaaaaaaatc
      421 gctcacgttt agaagatgat gaatttttta atccaaaagc acctaaaaaa gcacatcatt
      481 ttgtatcacc gtggattaaa cctgctttaa tcatgcagct cgtttacttt ttattagcga
      541 taatcattgc atatttaatt taaaaatgtg tatgtgttat acaaaaatgt ttctttagca
      601 tgtatatgaa gtctgataat tctgaaatgt cactgtggcg ctttaccact gtgtcgttat
      661 ccttatcata caagttcaaa gtatttattt agtcaataga aatctagcga cacgtactgt
      721 tttgagaggt tttcaccagt acaactacaa cgtcgtgatt attgataggc ggaatgtttg
      781 tgatgacttt ctactattat atagtgattt
//
LOCUS       DANHPA010000255          784 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.273, whole genome shotgun sequence.
ACCESSION   DANHPA010000255 DANHPA010000000
VERSION     DANHPA010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 784)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 784)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..784
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.273"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..373
                     /locus_tag="PTC28_002533"
     CDS             <1..373
                     /locus_tag="PTC28_002533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="exotoxin"
                     /protein_id="HDK5717742.1"
                     /translation="VTNYEGNHLDNYKSQTIYVKVFENSKHIITFEIQVDKKLVTAQE
                     LDTKARKFLIDKLNLYEFKGSPYETGYIKFIENDDKSFWYDLMPPPGNNFNQSKYLTM
                     YSDNKTVESKDIKIEVHLTKK"
     gene            complement(571..>784)
                     /locus_tag="PTC28_002534"
     CDS             complement(571..>784)
                     /locus_tag="PTC28_002534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1829 domain-containing protein"
                     /protein_id="HDK5717743.1"
                     /translation="NINTAKNALFDWDDVEAYRNQTFDANARLNIITDNEDDISDAVA
                     TMLSQYNVSVLSFHHKERLVQRFSNV"
BASE COUNT          295 a          125 c          128 g          236 t
ORIGIN      
        1 cgtaacaaac tatgaaggaa atcacttaga taattacaaa tcacaaacga tctatgtaaa
       61 agtttttgaa aatagcaaac atatcattac atttgaaata caagtcgaca aaaaactggt
      121 tacagcacaa gaactggata caaaggcgag aaaattttta attgataaac tcaatcttta
      181 tgaatttaaa ggatcgccat acgaaacagg gtatatcaag tttattgaaa atgacgacaa
      241 atcgttctgg tatgacttga tgccgccacc gggtaataat tttaatcaat ctaagtattt
      301 aacaatgtat agtgataata agaccgttga atctaaagac ataaaaattg aagttcattt
      361 aacaaagaaa tgatataaac acaataatat ggctaatgga tttggaacag gccatcacca
      421 taagggatat tttcattagt taagttctaa aagcaggcat tacagtgctt gcttttcatt
      481 ttattcaatc tgacaatgtc ggtatgatga aacactaatg tattcaaaat cgcaaaaaac
      541 aaaaagggta cgatgatgta catgtaccct ttatacatta ctgaaccttt gtactaaacg
      601 ttctttatga tggaatgaca agacactcac attatattga gatagcatgg ttgccacagc
      661 gtcactgata tcatcttcgt tatcagtaat gatgttgagt ctagcattag catcaaacgt
      721 ttgatttcta tacgcttcga catcgtccca atcaaaaagt gcgtttttag cagtattgat
      781 atta
//
LOCUS       DANHPA010000256          763 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.275, whole genome shotgun sequence.
ACCESSION   DANHPA010000256 DANHPA010000000
VERSION     DANHPA010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 763)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 763)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.275"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..>763)
                     /locus_tag="PTC28_002535"
     CDS             complement(<1..>763)
                     /locus_tag="PTC28_002535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000204270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HDK5717744.1"
                     /translation="DRGSRRFEEELVEYSSIEDVDENLVSEFKQLLDTNVDNEKLLKA
                     RGFMREGKLTVAGLLLFSNNINVYLPSARIRFMRYEGTKEESGARLNVVKDITFDKAL
                     PVAIREARAFINTQLREYTFLGKEGRFVTLPEYPEFAWFEGMINAIIHRRYDNQGDHI
                     RIKMFDDRLEISSPGVLPASVTLENIKEERYSRNPKLAAALTQYKWVRESNEGVGRIF
                     DEMKDYFLDDPVYSEPNNSSVQLTLKNNVVARKER"
BASE COUNT          232 a          174 c           89 g          268 t
ORIGIN      
        1 tctctttctt ttctagctac gacattattc ttcaaagtta gttgtactga actattatta
       61 ggctctgaat aaacaggatc atctaaaaaa taatccttca tttcgtcaaa tatacgtccc
      121 acgccctcat ttgattctct cacccattta tattgagtta atgctgcagc taattttgga
      181 ttccttgaat atctttcttc cttaatattc tctaacgtaa cagaagcagg caatacaccc
      241 gggctactaa tttctaacct gtcgtcaaac atttttattc ttatatgatc gccttgatta
      301 tcatatctac gatgtataat agcatttatc attccctcaa accaagcaaa ttccggatat
      361 tccggcaaag ttacaaacct tccctctttg cctaaaaaag tatattcacg taattgtgta
      421 ttgatgaaag ctctcgcttc tcttattgct actggcaaag ctttgtcaaa agtaatatct
      481 tttacaacgt taagtcttgc cccagattct tcttttgtac cttcatacct catgaatcgg
      541 atcctagcac taggtaaata aacattaata ttattactaa acaataataa acctgcaact
      601 gtcaatttac cttcacgcat aaaccctcta gcttttaata atttttcatt atctacatta
      661 gtatcaagta attgcttaaa ctcactaaca aggttttcat ccacatcttc aatactagaa
      721 tactcgacca attcttcttc gaaacgacgt gaaccgcgat cgt
//
LOCUS       DANHPA010000257          749 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.276, whole genome shotgun sequence.
ACCESSION   DANHPA010000257 DANHPA010000000
VERSION     DANHPA010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 749)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.276"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..>749)
                     /locus_tag="PTC28_002536"
     CDS             complement(<1..>749)
                     /locus_tag="PTC28_002536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="exo-alpha-sialidase"
                     /protein_id="HDK5717745.1"
                     /translation="YQYVTQYSVKFNGSNLQEYHNNNKVKMNIFYKDSIFKVTPTNYI
                     VYTTSMDGQKWGHPEILPPFLGLNHNASYLSPGQGLATSTGRLIFASYTSQGLVFIYS
                     DDHGITWQATKADLPFKNATAETQMVELKPNVIRAFFRTTTGKIGYITSLDNGHTWDN
                     VHYLSQINQTRYGTQISVIKYSQKYQGKDVIILSTPNSRTGRNNGQIWIGLVDSKTNN
                     IDWIHHKQVDEINVGYSYSALTETKDSKILL"
BASE COUNT          227 a          130 c          110 g          282 t
ORIGIN      
        1 ataataaaat tttcgaatcc tttgtctcgg ttaatgctga ataagaataa cccacattga
       61 tttcatcaac ttgtttatga tgaatccagt caatattatt tgttttacta tctactaaac
      121 ctatccatat ttgcccatta tttcttcctg ttcttgaatt tggggtgctg agaataataa
      181 catcttttcc ttggtatttc tgtgaatact ttattacaga aatttgtgta ccatatcggg
      241 tttgattgat ttgacttaaa taatgcacgt tgtcccatgt atgaccattg tctaaactcg
      301 taatatagcc tattttccca gttgtagttc tgaaaaaagc tctaatcaca tttggcttta
      361 attcgaccat ttgcgtttct gcagttgcat tcttaaaagg taaatcagct tttgttgcct
      421 gccaagttat tccatgatca tcactataaa taaaaacaag tccttgcgaa gtataagatg
      481 caaatattaa acgccctgta gaagttgcta aaccttggcc aggacttaaa taggatgcat
      541 tatgattcaa tcctaaaaat ggcggtaaaa tttcagggtg cccccatttt tgtccatcca
      601 tactcgtcgt ataaacgata taatttgtag gtgttacttt aaatatcgaa tctttataga
      661 aaatattcat tttaacctta ttattattat ggtattcttg caaatttgaa ccattaaatt
      721 tcactgaata ttgcgttaca tattgatat
//
LOCUS       DANHPA010000258          739 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.279, whole genome shotgun sequence.
ACCESSION   DANHPA010000258 DANHPA010000000
VERSION     DANHPA010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 739)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 739)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.279"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
BASE COUNT          280 a           75 c          146 g          238 t
ORIGIN      
        1 gatgaattta cagtttttac atataattag aaatggctga ttcaatcata tttaaactgg
       61 tcatatggta aagagaagtt tgattttgag gttaaaatga attcaaattg gtaacgactt
      121 tgaggatgaa aattattttg atatgtgaaa agggattttc tttgaatagc aagataggtt
      181 tgaaatatag ataactaaag ggtttagaaa gattgtgtag ttgataaacc ccgagtataa
      241 tggtttgttt ttcattgtga ggatagtaaa aaatatctta aatataaaat gtaatttatt
      301 gtgactttga atgaaatttt gagcgaacga gcaacttggt actagtgaaa attttatgca
      361 tttgcacaat aacaaaaaca gtgatgacca ttatagtcta agtggcgagc ggattcaact
      421 catttttagt gaagtggacg taaatgatgt taagttttgt tgtagatgat tggatagagc
      481 tattacatat atgatttgag gaaaatcata aaaaataggt aagtgtcacc tatataattg
      541 aaacaacgac acagctgtta aaagtgacag tgcatcgtaa gtacagcgat acagcctgtt
      601 ttaagcggat accgcgtcgt ctttacatca gctttcaaat aacgaggttt tggaaattgt
      661 aaaaataagt atacagtata aataagcaga taagtaaaaa taatgcgaaa taaaaaataa
      721 atatttcttg acatgaaca
//
LOCUS       DANHPA010000259          731 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.282, whole genome shotgun sequence.
ACCESSION   DANHPA010000259 DANHPA010000000
VERSION     DANHPA010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 731)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 731)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.282"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..144)
                     /locus_tag="PTC28_002537"
     CDS             complement(<1..144)
                     /locus_tag="PTC28_002537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717746.1"
                     /translation="MKNIFKVSALSISLGLVGLAGSQAYAAEGTPETQSNDFDGVNYV
                     HNEN"
     gene            complement(450..626)
                     /locus_tag="PTC28_002538"
     CDS             complement(450..626)
                     /locus_tag="PTC28_002538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016998564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HDK5717747.1"
                     /translation="MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVK
                     RKKKSEAARKRKFR"
BASE COUNT          236 a          129 c          101 g          265 t
ORIGIN      
        1 gttctcattg tgaacatagt taactccatc aaaatcattt gattgtgttt ccggtgttcc
       61 ttctgctgca taagcttgag accccgctaa gccgactaat cctagtgaaa tagaaagtgc
      121 tgaaacttta aaaatatttt tcattttcta attacctcct actcttgata taaaaagtat
      181 accaataaat ggataaattg taaatcatga tgctttgaaa aacaaacaat ttcataagca
      241 taataattat ttatctgtct atatattgct agataatttt atagttcata caaaaaggag
      301 atcaagcaac actttttgcc taatctctgt attttacact tcaaacctat ttgaaaatag
      361 caaaataaaa caacacactc tcttattagt gagagtgtgt tgcaatatat cattatttga
      421 atgttgaggg agttcaacac attgaatgat tatctgaact tacgtttacg cgcagcttca
      481 gatttctttt tgcgttttac gcttggtttt tcataaaatt cgcgtttgcg aacttcttga
      541 attgtaccgc tttttgaaac tgagcgttta aaacgacgta aagcatcttc taatgattcg
      601 tttttgcgga ctactgtttt agacatctgt atttccctcc ctccaaatat caaaaaaact
      661 tttattcatc atttacacag taagtaacca tgtaatgaat agtataaatt aaatcttttt
      721 ctcggtcaat c
//
LOCUS       DANHPA010000260          709 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.284, whole genome shotgun sequence.
ACCESSION   DANHPA010000260 DANHPA010000000
VERSION     DANHPA010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 709)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.284"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..>709
                     /locus_tag="PTC28_002539"
     CDS             <1..>709
                     /locus_tag="PTC28_002539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002469655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HDK5717748.1"
                     /translation="MIREIKNEFYYGRSRKGARKKFYENLSSLREQVANLIGAYSEEI
                     TITDNTTFGLNIVLNGMRFNEGDEIITTSMEHLASISPLINLKNKKGVVINEYKVKKG
                     DGVNLNKLEELISCKTKMMVISHIFWKTGEVVPIREVIDLAHSKGIKVLVDGAQAVGS
                     YPVNLRSINADFYCFPAHKWLYGPEGLGFLFVRKNIQKDLDIIFSGISTFQHFNGYND
                     YSIHDNGQKWELGTMFRP"
BASE COUNT          263 a           88 c          143 g          215 t
ORIGIN      
        1 gaatgataag agaaataaaa aatgaatttt attacggacg atcgagaaaa ggagcaagaa
       61 aaaagtttta tgaaaattta tctagtttgc gagaacaagt agctaactta attggcgcat
      121 atagcgagga aataactatt actgataata ctacttttgg tcttaatatc gtcctcaatg
      181 gcatgaggtt taatgaaggg gatgaaataa taacaacttc tatggaacat cttgcaagta
      241 tttcaccttt aataaatttg aaaaataaaa agggtgtagt aataaatgag tataaagtaa
      301 aaaaggggga tggggttaat cttaataaac tagaagaact aattagctgt aaaactaaaa
      361 tgatggttat atctcatata ttttggaaga caggagaagt agtacccatt agagaagtta
      421 ttgaccttgc ccatagtaaa ggaataaaag tactagtaga tggtgctcaa gctgtaggtt
      481 catatcctgt gaatttgcga agtattaatg cggattttta ttgttttcct gcacataagt
      541 ggctttatgg acctgaggga ttgggctttt tattcgttag gaaaaatatc caaaaagatt
      601 tggacattat attttccgga atttccacct ttcaacactt taatggttat aacgattaca
      661 gcattcacga caatggtcaa aaatgggaat taggaacaat gttcagacc
//
LOCUS       DANHPA010000261          708 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.285, whole genome shotgun sequence.
ACCESSION   DANHPA010000261 DANHPA010000000
VERSION     DANHPA010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 708)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.285"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..>708)
                     /locus_tag="PTC28_002540"
     CDS             complement(<1..>708)
                     /locus_tag="PTC28_002540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDK5717749.1"
                     /translation="VPPNISQVFKDLIPFSLVILTLYGLDILSRSVNKTNVAESILKV
                     FEPLFTAADGYVGITIIFGAFAFFWFVGIHGPSIVEPAIAAITYANIETNFKLLHAGE
                     HADKILTPGTQMFIVTMGGTGATLVVPFIFMWLSKSKRNKAIGRASVVPTFFGVNEPI
                     LFGAPIVLNPIFFIPFIMAPIINVWIFKFFVDVIGMNSFSVFLPWTTPGPLGIVMGTG
                     FGVWSFVLAMTLIIVDT"
BASE COUNT          266 a          138 c          117 g          187 t
ORIGIN      
        1 aagtatcaac aatgattaaa gtcattgcta aaacaaatga ccacacacca aatcctgtcc
       61 ccatcacgat tcctaatgga cctggagtcg tccaaggtaa gaacacacta aaactattca
      121 taccaatgac atcaacaaaa aacttaaaaa tccacacatt aataatgggt gccatgataa
      181 atggtataaa gaatatagga tttaatacga tgggtgcacc aaataaaata ggttcattta
      241 caccgaaaaa tgtaggtaca actgaggcac gcccaattgc tttattacgt tttgatttag
      301 acagccacat aaatataaac gggactacta atgtcgcacc agtgcccccc atagttacga
      361 taaacatttg tgtacctggt gttaaaattt tatctgcatg ttcaccagcg tgtagtaatt
      421 taaagtttgt ttcgatattg gcataagtaa tggctgcaat agcaggctcc acgatagaag
      481 gaccgtgaat accaacaaac cagaaaaacg caaaagcacc aaatataatt gtaataccca
      541 catagccatc tgctgcggta aataatggtt caaaaacctt taaaatagat tcagcgacat
      601 ttgttttatt cactgatctt gaaaggatat ccaatccata caaagttaaa ataacaaggc
      661 tgaatggaat taaatcttta aacacttgtg aaatatttgg gggcactt
//
LOCUS       DANHPA010000262          707 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.288, whole genome shotgun sequence.
ACCESSION   DANHPA010000262 DANHPA010000000
VERSION     DANHPA010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 707)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 707)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.288"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(230..379)
                     /locus_tag="PTC28_002541"
     CDS             complement(230..379)
                     /locus_tag="PTC28_002541"
                     /inference="COORDINATES: protein motif:HMM:NF024729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HDK5717750.1"
                     /translation="MIHHQDYQTRNEAMFSIVEYILTFYNSKRVHSTLNDMSPIEFEK
                     KYATK"
BASE COUNT          245 a          109 c          107 g          246 t
ORIGIN      
        1 ttttttatag gtgaccatta gcttcatacc atgatttgat gtgcttattt tttccagaga
       61 attttttaca tgcacttttt actccatatc tatacatatc ttgggcaaaa gctgtggtgg
      121 acctatgtca agaatacgga cacagaaaaa aagagaattc taccgcgctt cgcttgctag
      181 cctagccatc atgtactttt aaaaatcaaa aagtacattc tgagctgggt tattttgttg
      241 cgtatttctt ctcaaattca atggggctca tatcatttaa cgttgaatgc acccttttgg
      301 aattgtagaa agtaaggata tactccacaa tgctaaacat cgcttcattc ctcgtttgat
      361 agtcctgatg atgaatcaat tcttttttga tgatactgtg aaaagattct atacatttta
      421 ataatgagaa aaattaaatt tgctcatata cgtctttaaa ctttatcttg aatataacta
      481 ataaaataag catacctatc gaacaaaaga agtaaattaa gaaataattc aatggaatta
      541 agaaaccaaa taatacataa gatactggag tgattgatga actcatactt tgaattattg
      601 agaaaactct agatttataa ttttcgtcaa caatcttttg taacataact tggaagggta
      661 tattgtttaa tgcaactgag aatcctaaca atagatttga tattaat
//
LOCUS       DANHPA010000263          704 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.289, whole genome shotgun sequence.
ACCESSION   DANHPA010000263 DANHPA010000000
VERSION     DANHPA010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 704)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 704)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.289"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            6..>704
                     /locus_tag="PTC28_002542"
     CDS             6..>704
                     /locus_tag="PTC28_002542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDK5717751.1"
                     /translation="MMLINFEFKNHLSYRDDTVFSMETGKRLRKLKENTYEVQKTRHT
                     EKINLLKSAIVFGANGSGKSNLISALKLMQELILSGNMSATKKIPKVSFLLDDYSVEN
                     STKLCVEIVANGIQYQFEYVETAILRETLFYYENGKYHKYFERDEEAFIVTPKWVKDE
                     VTKTRRNELFLKVGQSVNDTHCLNVYRWFSNQLVFINGHLEHRDIKEMLHVIENEESK
                     RNLIEFLQKCDIKVA"
BASE COUNT          275 a           74 c          136 g          219 t
ORIGIN      
        1 gtaagatgat gctcattaac tttgaattta aaaaccatct ttcttataga gatgatacag
       61 tttttagtat ggaaacaggt aaaagactaa ggaagttaaa agagaatact tatgaagttc
      121 aaaaaacacg tcatacagaa aaaataaatt tattaaaaag cgcaattgtg tttggtgcaa
      181 atggttctgg taaatctaat ttaattagtg cattaaagtt aatgcaagaa ttaattttga
      241 gcgggaatat gagtgctaca aaaaaaattc ctaaagtttc ctttttatta gatgattatt
      301 cagttgaaaa tagtacaaag ttatgtgtag aaatcgtagc gaacgggatt caatatcaat
      361 ttgaatatgt agaaacggct attttacgtg aaacattatt ttattatgaa aatggcaaat
      421 accataaata ttttgaaaga gatgaagagg catttattgt tacgcctaaa tgggttaaag
      481 atgaagtgac gaaaacgaga agaaatgaac tctttttaaa agttggtcaa agtgtgaatg
      541 atacacattg tttgaatgtc tatcgatggt tctcaaatca gctcgtcttc attaacgggc
      601 atttagagca tcgggatatt aaagaaatgc tacatgtgat agaaaatgaa gaaagtaaaa
      661 gaaacctgat agagttttta cagaaatgtg atattaaagt ggct
//
LOCUS       DANHPA010000264          698 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.291, whole genome shotgun sequence.
ACCESSION   DANHPA010000264 DANHPA010000000
VERSION     DANHPA010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 698)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 698)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.291"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
BASE COUNT          246 a          105 c          132 g          215 t
ORIGIN      
        1 taaagacaca ctaagaatga ctaaactctt ttactatgaa tgtcaactat aggctcggta
       61 gaatcgaact gttagtcata gaaaaggatg ctcattttgc acaatacttt ttgcagataa
      121 aaggtgctac ttgtcattcg caagaagata tacgtattta gacatgttag atcacgataa
      181 gcttttgtac atgttcaaac tttatgaaaa aacgtggata ccatatcgta caatctacaa
      241 tactttcaag gatgttttca atgaaattaa ctaagtgata cgggcttgga taaattactt
      301 taggagaggt tttatttgta gggtccgtca gaaattatga ctattatcga atacgtatga
      361 gacccatcgc gaagtttcaa catagcacct ctgcaattaa tactcttagt ctaaattgca
      421 gaggtaattt atacattata tcgaagtact gaatacggaa ctgtatgctc ggtggtgtga
      481 aaggacgaat agtcaattaa tgtctattgt cctcctcgat tttaaggaga ttaacatatg
      541 aatataaaag tacgaaaact ttttaactgg actgaattac caaaaaaggg gcaatagcag
      601 aacttgtaaa tcaatatgac ggattaaagt ggatttctca agagcgagtt aaaggtaatt
      661 gttggcctta taagttagcc atagaaacat ctttagaa
//
LOCUS       DANHPA010000265          679 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.295, whole genome shotgun sequence.
ACCESSION   DANHPA010000265 DANHPA010000000
VERSION     DANHPA010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 679)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 679)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.295"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            83..670
                     /locus_tag="PTC28_002543"
     CDS             83..670
                     /locus_tag="PTC28_002543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019165399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717752.1"
                     /translation="MNTSKRERMEYLVHTLIDNEPHAFKFHGEMATHLFLTDQLHFDN
                     KVEICVKRNELLKILRVIPMAFTIKVINKKGEQLPYDDVQLHQMSSLEVYDHNDLLMN
                     IIIYDVDNEHWLFRLNHNVRIPEKYIYYHSLKWKVDYIKPEIVLMYLLHEPFNDKKVP
                     FYRHLIDKMSYFQFVTLKIAVGEDLLKRVISERST"
BASE COUNT          242 a           91 c          121 g          225 t
ORIGIN      
        1 gttgttaatt cattgataaa acacaattaa tctagtataa ttaaacgcaa ttgtaagcgt
       61 tttcccggag gggtgaaata acatgaatac atcaaaaaga gaacgaatgg aatatttagt
      121 acatacgtta attgataatg agccgcatgc gtttaaattt catggtgaga tggcaacgca
      181 tttattttta acggatcaac ttcactttga taacaaagtt gaaatttgtg tcaagcgaaa
      241 tgagctattg aaaattttac gtgtgattcc aatggctttt acgattaaag tgataaataa
      301 aaagggagag cagctgccat atgatgatgt gcaactccat caaatgtcct ctttagaagt
      361 ttatgatcat aatgatttgt taatgaacat tattatttat gatgtagata atgagcattg
      421 gctatttcga ctcaatcata atgtcagaat tcctgaaaag tatatttact atcattcgct
      481 caaatggaaa gtcgactata ttaagcctga aattgtgctc atgtatttac tacatgaacc
      541 ttttaatgat aaaaaagtac cgttttatcg tcatttaatt gataaaatga gttactttca
      601 atttgtaaca ttgaaaatag cagtcgggga agatttatta aaacgcgtca tttcagaaag
      661 aagtacttaa cgtgaatgt
//
LOCUS       DANHPA010000266          674 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.297, whole genome shotgun sequence.
ACCESSION   DANHPA010000266 DANHPA010000000
VERSION     DANHPA010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 674)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.297"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            1..370
                     /locus_tag="PTC28_002544"
                     /pseudo
     CDS             1..370
                     /locus_tag="PTC28_002544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002449171.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
BASE COUNT          270 a           93 c          117 g          194 t
ORIGIN      
        1 atctatatac actacaaata tattgagata tgtaacgaaa gaaaattttg actcttattt
       61 tcattttata tatacacaaa catatgaata tagaaaatgg attaaaatta ttactaaacc
      121 agcagtcaac caggcaagtt ttaccacggt cgattttaaa aaaataccat atcatgtccc
      181 tgaaattaaa gaacaacaaa aaattggcga tttcttcagc aaacttgacc gtcaaattga
      241 attagaagaa caaaaattag tgttgttaga agaacagaaa aagggatata tgcaaaagat
      301 tttctcgcaa gaacttcgat ttaaagatga caatggcaat gattatccag agtgggaaga
      361 gaagaaacta agtgatctgg gtagttatag taaaagttat tctttttcaa gagatgtaga
      421 aggagagggg aaagttcatc atattcatta tggagacatt cactcaaaat tgccttcaaa
      481 aattagcgat ataaatctat taccgacaat taaagaaagt aaagattttg agtttctaca
      541 aaaaggagac attatttttg cggatgcctc tgaagattat aaagatttag gcaaagccat
      601 aatggtagat atcgatgagg ataacataat tgcaggactt catacgcatg ttttcagacc
      661 aaaccttcaa gttg
//
LOCUS       DANHPA010000267          654 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.298, whole genome shotgun sequence.
ACCESSION   DANHPA010000267 DANHPA010000000
VERSION     DANHPA010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 654)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.298"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
BASE COUNT          224 a           89 c          104 g          237 t
ORIGIN      
        1 tctttcttaa ttttatcctt tatactttca gcatgtatac aattagtaca ttcatctttt
       61 acatttcttt acttgatttt atgggtttat gtaatgataa atgtcattaa aaaaacaaat
      121 aaatataacc aaggatacca ataattattg agtggctagc gtttagccac tcaatttttg
      181 tgtgagcaat gagacataat cccaacaagg acggtgattt tcttgtaaga gcataagagg
      241 aatatgtacc cattttataa tgggtaatct ggcaaagcca gatatttcaa gggtttcaga
      301 cattttgcta atgggggtca caaaaatcaa tttgtcacaa aagtgtgaca gctatttttg
      361 acgatttttg attttatttt tttgctggag cgattaaaaa aatatattta tttagcttac
      421 atttgcgttc taagcgacga aaataattat acgggtataa aaaagtatat attttttaag
      481 tttgctctat aaaccccctt aaaatgcaaa ataaggctat tggattataa cgcgcaaatt
      541 ttgattttag cacgatacca tttttggtat gtaagtgcgc ccttgaacaa taaaaaaggc
      601 ttaattaaac taaagtttaa ctaagatagt cacgtgtttt attatgttta aaaa
//
LOCUS       DANHPA010000268          653 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.299, whole genome shotgun sequence.
ACCESSION   DANHPA010000268 DANHPA010000000
VERSION     DANHPA010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 653)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 653)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.299"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            80..262
                     /locus_tag="PTC28_002545"
     CDS             80..262
                     /locus_tag="PTC28_002545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717753.1"
                     /translation="MKNIDKFKVISNEVLKDLSGGMSRCKWAQIACINDSMLVRFGTS
                     DPESACDYMKKICKDE"
     gene            387..>653
                     /locus_tag="PTC28_002546"
     CDS             387..>653
                     /locus_tag="PTC28_002546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter ATP-binding protein"
                     /protein_id="HDK5717754.1"
                     /translation="MKFSKRFYRAQVDSQDCGAAALAMILEFYGSHYSLDFLRRKLRT
                     TVNGTTAYGLVQVADKLGFETVPIKADISLFEIDDVQYPFIVHVK"
BASE COUNT          219 a           68 c          139 g          227 t
ORIGIN      
        1 cgttttgaaa ataaattata tatttaatga attaattttt aatattatta ttaaattgtt
       61 ttgtttagga ggaatagata tgaaaaatat tgataaattt aaagtgatat caaatgaggt
      121 actgaaagac ttaagtggtg ggatgtcccg ttgtaaatgg gctcagattg catgtataaa
      181 cgacagtatg ttggttagat tcggtacatc tgatccagag agtgcatgtg attatatgaa
      241 aaaaatatgt aaagatgaat aaccattaaa gcttttaata ataggattga attttgacat
      301 gatattaagt gggtgggaat taccgcccgc tttttgaata tttaaatgtt gttctaaaaa
      361 gtggtgggaa ggagtagaag tgtcgaatga aattttcaaa acgattttat cgtgcacaag
      421 tagattctca agattgtggc gcggcagcgc tcgctatgat attagaattt tacggttctc
      481 actattcttt ggattttctg agaagaaagt taagaacaac agtaaatggc actacagcat
      541 atggtttggt tcaggtagca gataagttag gttttgagac agttcctatt aaagcagata
      601 tatctttgtt tgaaattgat gatgtacagt atccttttat cgttcatgtt aaa
//
LOCUS       DANHPA010000269          652 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.300, whole genome shotgun sequence.
ACCESSION   DANHPA010000269 DANHPA010000000
VERSION     DANHPA010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.300"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..421
                     /locus_tag="PTC28_002547"
     CDS             <1..421
                     /locus_tag="PTC28_002547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HDK5717755.1"
                     /translation="PSLLKNAIIETLRFNSPVQLIPRQLSMPYTFRDKKLNVDDVVIC
                     MIGAANRDPKAYTAPDEFNIHRKSKNNKPFTSYSQNLSFGFGVHTCVGATYALIQLEL
                     VVRTLLKRLKNIKLETNVLHERGIYTRGPKSLIISFD"
BASE COUNT          253 a           86 c          101 g          212 t
ORIGIN      
        1 ccctagttta ctaaaaaatg caataataga aacacttcgt ttcaattcac cagtacagtt
       61 aatacctaga caattatcga tgccttatac ttttcgtgat aaaaagttaa atgttgatga
      121 tgtggtaata tgcatgattg gtgcggctaa tagagaccca aaagcttata ctgctccaga
      181 tgaatttaat atccatagaa aatcaaaaaa taataaacct ttcacttcat actcacaaaa
      241 tttatcattt ggctttggag tacatacttg tgtaggagca acgtacgccc ttattcaatt
      301 ggaattggta gttagaacat tattgaagag attgaaaaat attaaattag aaactaatgt
      361 attacatgaa agaggcatat atacgagagg accaaagtca ttgataatta gttttgatta
      421 atttgttaaa atagcgattg tcaaggtgct atcaataact atttactaca ttaaagcttt
      481 tcgaaaagat aaatgcagta aaaataatta agtttatata agtatttcct cattgatgca
      541 ttcaaggaca atataaaaaa attgtaaatt tagaagttga acatgtttgt attgttcaat
      601 catatacaat aatgaattag aacctcaatg aacattgaaa gtttggttag aa
//
LOCUS       DANHPA010000270          632 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.306, whole genome shotgun sequence.
ACCESSION   DANHPA010000270 DANHPA010000000
VERSION     DANHPA010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 632)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.306"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(227..315)
                     /locus_tag="PTC28_002548"
     tRNA            complement(227..315)
                     /locus_tag="PTC28_002548"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(278..280),aa:Ser,seq:gga)
     gene            complement(365..436)
                     /locus_tag="PTC28_002549"
     tRNA            complement(365..436)
                     /locus_tag="PTC28_002549"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(401..403),aa:Glu,seq:ttc)
     gene            complement(438..512)
                     /locus_tag="PTC28_002550"
     tRNA            complement(438..512)
                     /locus_tag="PTC28_002550"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(478..480),aa:Asn,seq:gtt)
     gene            complement(520..593)
                     /locus_tag="PTC28_002551"
     tRNA            complement(520..593)
                     /locus_tag="PTC28_002551"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(559..561),aa:Gly,seq:tcc)
BASE COUNT          188 a          138 c          138 g          168 t
ORIGIN      
        1 tgatcacttg tggctaaacg actcaaatct tgtgactaaa tttgtgtttt gggcactttc
       61 aatcagccac attgtgacca aaaattttaa aaactaagtt aagtatagtt aaattttgtt
      121 ttctatgtat ttaatgaagt agtctcaaat ccttgatatg acagtgtttt gagcttatat
      181 gtaaaaagag agccgaaaaa gtagtttaaa ctttttcggc tccttacgga gagcaaggga
      241 ttcgaaccct cgagacgctt gtggcgccta cacactttcc aggcgtgctc cttcggccaa
      301 ctcggacaac tctccacctt ataaaatata aaaaatcaga agcgatattt cacttctgac
      361 tatatgaccc ctacgggact cgaacccgtg ttaccgccgt gaaagggcgg tgtcttaacc
      421 gcttgaccaa ggggccgtgg ctccacaggt aggactcgaa cctacgaccg atcggttaac
      481 agccgatagc tctaccactg agctactgtg gaataacaat ggagcgggtg atgggaatcg
      541 aacccacaac atcagcttgg aaggctgagg ttttgccatt aaactacacc cgcattaaaa
      601 ataaacgata taggcggttg atgggaatcg aa
//
LOCUS       DANHPA010000271          626 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.309, whole genome shotgun sequence.
ACCESSION   DANHPA010000271 DANHPA010000000
VERSION     DANHPA010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 626)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 626)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.309"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..>626
                     /gene="argS"
                     /locus_tag="PTC28_002552"
     CDS             <1..>626
                     /gene="argS"
                     /locus_tag="PTC28_002552"
                     /inference="COORDINATES: protein motif:HMM:NF012952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HDK5717756.1"
                     /translation="DGAYIVDLEDLPPALIKKRDGASLYITRDLSAVLYRTETFNPTR
                     ILYVVGQEQSIHFKQLDKLTRLLELTPVIEHIPFGLILKDGKKMSTRQGKVILLEDII
                     AEVEQAVLRTLEKKKSNLRNKKEIAKEIAIASIKFHDLKNDRLSSYDLKIDEMLAFEG
                     DTALYIMYTYARIQSILGRTKYSDDFKVDFQFEESMWPILNHLKSYNE"
BASE COUNT          224 a           91 c          117 g          194 t
ORIGIN      
        1 tgatggtgct tatattgtag atttagagga tttaccacct gcactgatta aaaaaagaga
       61 tggggcatct ctatatatca cgagagattt atcagctgtt ttgtatcgta ccgaaacctt
      121 taatcctaca cgtatactat atgtagtagg ccaagaacaa tctattcatt tcaagcaact
      181 agacaaactt actagattat tggaattaac accagtcata gagcatattc cttttggttt
      241 gattttaaaa gatggtaaaa aaatgtccac aagacagggc aaggtaatac tacttgaaga
      301 cattattgca gaagtagagc aagccgttct aaggacttta gaaaagaaaa agtcgaactt
      361 aaggaataaa aaagaaattg ccaaagaaat tgctattgct tctatcaagt ttcacgatct
      421 taaaaatgat cgccttagta gctacgattt gaaaattgat gagatgttgg cttttgaagg
      481 ggatactgca ttgtacataa tgtatactta tgcaaggatt caatctatct taggaagaac
      541 caaatactct gatgatttta aggtggattt tcagtttgag gaaagtatgt ggcctatttt
      601 aaatcattta aaatcctata atgaaa
//
LOCUS       DANHPA010000272          613 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.312, whole genome shotgun sequence.
ACCESSION   DANHPA010000272 DANHPA010000000
VERSION     DANHPA010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 613)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 613)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.312"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..402
                     /locus_tag="PTC28_002553"
     CDS             <1..402
                     /locus_tag="PTC28_002553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015728586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717757.1"
                     /translation="SLFSKLAIAGAVLTGLASTVTLYQDSGVNYEAKAQEENPNSQHF
                     KKNVDDKELDFTDILSKDKITAKELSDKIANELSANGLDPKEYSFTLKVTTKDGGTIQ
                     GDGKVGEVPNNQSMEFNPSKDKITEFEITKS"
BASE COUNT          235 a           85 c          114 g          179 t
ORIGIN      
        1 agtttattta gtaaattagc tattgcaggt gctgtattaa caggtttagc tagtactgtt
       61 acgttatacc aagactctgg agttaattat gaagcaaaag cacaagagga aaacccgaat
      121 agtcaacact ttaagaaaaa tgtagatgat aaagaactcg attttacaga tatccttagc
      181 aaagataaaa ttacagctaa agagttatcc gataagattg caaacgaatt gagtgcgaat
      241 ggcttggacc caaaagaata tagttttaca cttaaagtaa ctaccaaaga tggtggaaca
      301 attcaaggtg acggaaaagt cggagaagtt ccaaataatc aatcaatgga attcaaccct
      361 agtaaagata aaattacaga atttgaaatc actaaaagtt aataataaaa cttatcactt
      421 ttaattttaa ggcgataaga acactaaggg ccgtgagcac ctggatttat tcaggtgtta
      481 gcggtcctca atttatgtta atcagtagtc tgagatgaat gaaaaatctt tctaaaaagc
      541 aaaattttta catagagtta gtacttggaa aacggaaagg gacttatttt acatttttct
      601 cttttagatg tgt
//
LOCUS       DANHPA010000273          603 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.314, whole genome shotgun sequence.
ACCESSION   DANHPA010000273 DANHPA010000000
VERSION     DANHPA010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 603)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 603)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.314"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..501)
                     /locus_tag="PTC28_002554"
     CDS             complement(<1..501)
                     /locus_tag="PTC28_002554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction protein TRAP"
                     /protein_id="HDK5717758.1"
                     /translation="MKFYITYGTYGYLNQIQLNNENHDLFIFSGNDQSVMIEETDDET
                     IFQQPKKFRVLTRFGSISSDDFHALISIPTTEDHKYQLEKKLESYLPHLDEYDGFNTY
                     RLLKPLQSNIYKVFLGFSSRKAYEDYKKSSVFREHFSKEAVRPLAGSSSAHASYLEQF
                     FYPISEE"
BASE COUNT          188 a           92 c          101 g          222 t
ORIGIN      
        1 ctcttctgaa attggataaa agaattgttc taagtatgaa gcgtgtgcac ttgatgatcc
       61 tgcaagtggt cgcacagctt ctttagaaaa atgttcacgg aatacagaag attttttgta
      121 atcttcatag gctttacgtg atgaaaatcc taaaaatact ttataaatat tgctttgtaa
      181 aggttttaat aatcggtaag tattgaaacc atcatattcg tctaaatgag gaaggtaact
      241 ctctagtttc ttttccaact gatatttatg atcttcagtc gtcggtattg atattaatgc
      301 atgaaaatca tcacttgaaa ttgaaccaaa gcgagttaag acgcgaaatt ttttaggttg
      361 ttgaaaaata gtctcgtcgt ctgtctcctc aatcatgaca gattggtcgt ttccagaaaa
      421 aataaataag tcatggtttt cgttgttgag ttggatttga tttaaatatc cgtaagtacc
      481 atatgtgata taaaatttca tggtgttctc ctccttgttt tcattcatta taagtttttc
      541 tcgcttaaat caccactaaa atatacttaa ttctcactta aattaagtga ctatttttgt
      601 acg
//
LOCUS       DANHPA010000274          567 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.321, whole genome shotgun sequence.
ACCESSION   DANHPA010000274 DANHPA010000000
VERSION     DANHPA010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 567)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 567)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.321"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..>567
                     /locus_tag="PTC28_002555"
     CDS             <1..>567
                     /locus_tag="PTC28_002555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002434477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717759.1"
                     /translation="REKVAVLFTGGRDSSLVACLESLKDKEVHLITCNSGIGIKSELS
                     EIRVKELIERFPNNIIGRTILPTYGLFRSIAIKNLEDDFKRWGVNLVLLGDKLAIHAA
                     ATVYCLEHDIKKIVDGCVGYQEDLAEQKNIAIELFKEFEAKYGIDYECPIYNFGDKDD
                     VKYALMTFGLSSKSLEGVSIFGDAFSEP"
BASE COUNT          197 a           54 c          119 g          197 t
ORIGIN      
        1 aaagagaaaa ggttgctgtt ttatttacag gtggaagaga ttcttctttg gttgcttgtt
       61 tggaatctct taaagataag gaagtacatt taataacttg caatagtggt attggtataa
      121 agagtgagct ttcagaaatt agagttaaag aactaattga acgatttcca aacaatatta
      181 ttggaagaac gattttacct acatatgggt tgtttagaag tattgcaata aaaaatttag
      241 aagatgattt caaaagatgg ggtgtaaatc ttgtgctttt aggggataag ttagctatac
      301 atgcagctgc gacagtatat tgtttagaac atgatataaa aaaaattgtc gatggttgtg
      361 taggatatca agaagattta gctgagcaaa aaaatattgc aatagaatta tttaaagaat
      421 ttgaagctaa gtatggtatt gattacgagt gtcctattta taattttggt gataaagatg
      481 atgttaaata cgctcttatg acatttggac tatcttctaa atctttagaa ggtgtttcta
      541 tatttggtga tgctttcagt gaaccaa
//
LOCUS       DANHPA010000275          562 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.322, whole genome shotgun sequence.
ACCESSION   DANHPA010000275 DANHPA010000000
VERSION     DANHPA010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 562)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 562)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.322"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..>562
                     /locus_tag="PTC28_002556"
     CDS             <1..>562
                     /locus_tag="PTC28_002556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_498907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5717760.1"
                     /translation="PVPERQQDETYKKLRLQVFIGIFLGYAGYYLLRKNFSIAMPYLA
                     DMGFSKAELGFALSAISIAYGFSKFVMGTVSDRSNARIFLTLGLVLTAIVNLLMGFIP
                     ALTSSVTIMFIMLFLNGWFQGMGWPPSGRVLVHWFSVSERGSKTAIWNVAHNVGGGLM
                     APIALFGIYLTGSLSFGYLQGFEGAFI"
BASE COUNT          136 a           93 c          144 g          189 t
ORIGIN      
        1 acctgtacca gaaaggcagc aagatgagac atataaaaaa ttaaggttac aagtgtttat
       61 tggtatcttt ttaggctatg caggttatta tttgttgcgt aaaaactttt caatcgcaat
      121 gccgtactta gcggatatgg gtttttcaaa ggcagaactc gggtttgcgt tatccgcgat
      181 ttcgattgct tacggtttta gtaagtttgt catggggacg gtcagtgata gaagtaacgc
      241 ccgtatcttt ttaacgttag gacttgtgtt aacagctatc gtcaatttac tgatgggctt
      301 cattcctgcg ttaacatcaa gtgtcacgat catgttcatc atgttattcc tcaatggttg
      361 gttccaaggt atgggctggc cgccgtcagg tcgtgtgctc gtgcattggt ttagtgtgag
      421 tgaacgtgga agtaaaacgg cgatttggaa cgtcgcgcat aacgtcggtg gtggtttaat
      481 ggcaccaatc gcattgtttg ggatttattt aacaggttca ttgagctttg gttatttaca
      541 aggctttgaa ggggcattta tt
//
LOCUS       DANHPA010000276          545 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.328, whole genome shotgun sequence.
ACCESSION   DANHPA010000276 DANHPA010000000
VERSION     DANHPA010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 545)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 545)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.328"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(242..406)
                     /locus_tag="PTC28_002557"
     CDS             complement(242..406)
                     /locus_tag="PTC28_002557"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717761.1"
                     /translation="MLKNSGVKVTPGLAEGLAAASTVGDVNALLAAAAGVTVAPWLAV
                     AIAGAGAVSL"
BASE COUNT          199 a          123 c           78 g          145 t
ORIGIN      
        1 cggtaatccg tagcctaaaa tcaaaaatat aaaaagcaca aaggacatta ttagcttaac
       61 atttgaatca agttctaatt cagtggacga aatttcttgc ttcattactg tcacaccaat
      121 caatgtataa aaaaagattg caataattga aaaaataagc cttttaactt tcaagaaata
      181 acctccttta tcaaaaaata aaataacagg gagaaagagt attcaccctg ttatacaaaa
      241 actataagct tactgcccct gctccggcaa tagcaactgc caaccatgga gccacagtaa
      301 cacccgccgc ggcagcaagt aaagcgttta cgtccccgac cgtacttgcg gctgcaagac
      361 cttcagctaa tccaggtgta accttaacac cactgttttt aagcaagctt aatacttccg
      421 ttacaccgaa aacctgagaa caataagtta atgctactaa tgttaaagtc gctataacaa
      481 ctttagcagc cgcttttgta ttaaaagcct ttaatgtaat catattactc atttcaatac
      541 aactc
//
LOCUS       DANHPA010000277          542 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.330, whole genome shotgun sequence.
ACCESSION   DANHPA010000277 DANHPA010000000
VERSION     DANHPA010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 542)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.330"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            30..227
                     /locus_tag="PTC28_002558"
     CDS             30..227
                     /locus_tag="PTC28_002558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002499642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717762.1"
                     /translation="MEKEILEKVKQLLENQTSYKISKETNLPYQTIQDIKNGKTKLLE
                     SKFKTVIRLYEYQKQLEQENE"
     gene            220..516
                     /locus_tag="PTC28_002559"
     CDS             220..516
                     /locus_tag="PTC28_002559"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717763.1"
                     /translation="MNKITMPDITYGGDPPNFCTHFSKISFLGAGLFKNGYKLFESTG
                     KVVEIQSWLVIDDAYAEPGHSHSTIVNKEGEAIGIHYVSDREDTPDKKLIVYTL"
BASE COUNT          221 a           84 c           90 g          147 t
ORIGIN      
        1 taaattatcg actcggttca ttttaaaaca tggaaaaaga aatattggaa aaagttaaac
       61 aacttcttga aaatcaaaca agctataaga tttctaaaga aacaaattta ccgtaccaaa
      121 caattcaaga tattaaaaat ggtaaaacta aactattaga atcaaagttc aaaactgtaa
      181 tacgtttata cgaataccaa aagcaactgg aacaagagaa tgaataaaat caccatgcct
      241 gacattacgt acggcgggga tccccccaat ttctgtaccc acttttctaa aatttcgttt
      301 ttgggtgcag gcctattcaa aaatggatat aaattattcg agtcaacagg aaaagtcgtt
      361 gaaattcaga gttggttagt aatagatgat gcttatgctg agccaggaca ctctcatagt
      421 acgattgtga ataaagaggg tgaagcaata ggtatacact atgtatcaga tagagaagac
      481 acaccagaca aaaaacttat agtatatact ttgtaaaaga tattgaaaac cttatttata
      541 ag
//
LOCUS       DANHPA010000278          539 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.333, whole genome shotgun sequence.
ACCESSION   DANHPA010000278 DANHPA010000000
VERSION     DANHPA010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 539)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 539)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.333"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..101
                     /locus_tag="PTC28_002560"
     CDS             <1..101
                     /locus_tag="PTC28_002560"
                     /inference="COORDINATES: protein motif:HMM:NF019493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ribbon-helix-helix protein, CopG family"
                     /protein_id="HDK5717764.1"
                     /translation="DKLKELAKKENRSMSNMVEHLITSYIERSSEK"
     gene            98..445
                     /locus_tag="PTC28_002561"
     CDS             98..445
                     /locus_tag="PTC28_002561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717765.1"
                     /translation="MKLIIDINDNNYKYLNELAQQDNTNVESIINDLIQTHIVNVNES
                     YRNIDKKELNDFANVMQRYFHEDLESMYDVIGSDEELSTDKQMLIVYKKLFQDVALRN
                     GIALELFEAYKKG"
BASE COUNT          217 a           81 c          100 g          141 t
ORIGIN      
        1 gagataaatt gaaggaactt gctaaaaaag agaatagaag tatgtcaaat atggttgaac
       61 atttgattac ttcttacatt gaaagaagtt ctgaaaaatg aagctaatca tcgatataaa
      121 cgataacaat tataagtatc ttaacgagct cgctcaacaa gacaatacaa atgttgaaag
      181 tattatcaat gatttaatac agacacacat cgttaatgtg aatgaaagct atagaaatat
      241 agataaaaag gaattaaacg acttcgctaa tgtcatgcaa cgttatttcc atgaagattt
      301 ggaaagtatg tatgacgtta tcggttccga cgaggagtta agtacagaca agcaaatgct
      361 tattgtgtat aagaagctgt ttcaggacgt ggcattaaga aacggcatag cgcttgaact
      421 ctttgaagca tataaaaaag gctaaccacc gtagcagtta acccacacac tataactgaa
      481 taaattatag cgtagatcgc ttatcaaaat tatagcacaa aaaaacaggg cagtcgcaa
//
LOCUS       DANHPA010000279          530 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.337, whole genome shotgun sequence.
ACCESSION   DANHPA010000279 DANHPA010000000
VERSION     DANHPA010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 530)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 530)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.337"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..462)
                     /locus_tag="PTC28_002562"
     CDS             complement(<1..462)
                     /locus_tag="PTC28_002562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HDK5717766.1"
                     /translation="MLHHNFTGMKRLQHPPRYLPGLDGLRAISVIAIIIYHLNAQWLA
                     GGFLGVDTFFVISGYLITSLLLFEYENYQTIDLANFWIKRFKRLIPAMLFVTLVSVLY
                     VALFAPQILHSIKGDAIAALLYVSNWWYIFQDVDYFDQFKPMPLKHLWSLAV"
BASE COUNT          193 a          102 c           83 g          152 t
ORIGIN      
        1 aacagccaat gaccataagt gtttcaatgg catcggtttg aactggtcaa aatagtctac
       61 atcttggaaa atgtaccacc aattcgatac atataacaac gctgcaatcg catccccttt
      121 aatcgaatgt aatatttgag gggcaaataa agcgacgtac aagactgata ctaaagtcac
      181 gaataacatc gctgggatta accttttaaa acgcttaatc caaaagtttg ctaaatcgat
      241 tgtttggtag ttttcatatt caaataataa tagtgatgta attaaataac cagagatcac
      301 aaaaaatgta tctacaccta aaaatcctcc agctagccac tgtgcattaa gatgataaat
      361 aataatcgcg atcactgaaa ttgcacgcaa cccatctaat cccggcaaat accgtggtgg
      421 atgttgcaat cgtttcattc cagtaaaatt atgatgtaac ataacaacat tctcctaatt
      481 gatgatttaa taagaaacga tttgtggata tatgctattc aatttaccac
//
LOCUS       DANHPA010000280          527 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.339, whole genome shotgun sequence.
ACCESSION   DANHPA010000280 DANHPA010000000
VERSION     DANHPA010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 527)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.339"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            106..441
                     /locus_tag="PTC28_002563"
     CDS             106..441
                     /locus_tag="PTC28_002563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015729199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HDK5717767.1"
                     /translation="MSLTNQQRRTFYNSMAWREKRADIMRRDHFECQRCKSMGKVAVD
                     EYELNKNHRKKIKLVVHHIKELADYPELCLDDDNLETLCVECHNEIHDRNFKINSKNK
                     IKKWDDEKW"
BASE COUNT          195 a           69 c          116 g          147 t
ORIGIN      
        1 agttgatatg agtgcataac tcaaatacaa atcaaaacaa aatcattagg cactgtatta
       61 aatatacggt gtctttttag tttgtaagca gaggggtata aggctatgtc attaactaac
      121 cagcaacgac gtacttttta taatagtatg gcatggagag agaaacgagc agacatcatg
      181 cgtcgtgatc actttgaatg tcaacgttgt aagtcgatgg ggaaggtagc tgttgatgag
      241 tatgaactta ataagaatca tagaaagaag attaaattag tagttcatca tataaaagag
      301 ttagctgact atcctgagct atgtttagat gatgataatt tggaaacttt gtgtgtcgaa
      361 tgccataacg aaatacacga tagaaatttt aaaattaatt cgaaaaataa aataaaaaaa
      421 tgggacgatg aaaaatggta aaaggttata taaattatca ataccccccg ttctaaagtt
      481 ttgagattga aacggcgcgg ggaaccggtg gggaggagtc tactccg
//
LOCUS       DANHPA010000281          488 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.350, whole genome shotgun sequence.
ACCESSION   DANHPA010000281 DANHPA010000000
VERSION     DANHPA010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.350"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(131..>488)
                     /locus_tag="PTC28_002564"
     CDS             complement(131..>488)
                     /locus_tag="PTC28_002564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717768.1"
                     /translation="QKQAAELELKKFFSLIDNEMPYFMPRCIVDTVWHEKLKDAENYN
                     EFCMEYNGNYIEHMENKGKGFLPWMEKYEEEYGKMTQEWFTDSSGKVLKDLYGKYIEE
                     GDIQLEWDCVPIATTD"
BASE COUNT          143 a           90 c           56 g          199 t
ORIGIN      
        1 cctttgtcat atatattaaa tagaaaaatt tcattgtgct tgcttgtttg aattttcttt
       61 atagaatatt ggtttttgaa acttttaaag tctccaggac aagaaccaaa aagttcttgt
      121 tctggattat ttaatctgta gttgctattg gtacacaatc ccattctaat tgtatatccc
      181 cctcttctat atactttcca tataaatctt ttaaaacttt tccactagaa tctgtaaacc
      241 attcttgagt catttttcca tattcttctt cgtatttttc catccaagga agaaatccct
      301 tacctttatt ttccatatgt tcgatataat taccattgta ttccatacag aactcgttat
      361 agttttcggc atcttttaat ttttcgtgcc atacagtgtc aacaatacat ctaggcataa
      421 aataaggcat ttcattgtca attagagaaa aaaacttttt taattctaac tctgcagctt
      481 gcttttga
//
LOCUS       DANHPA010000282          483 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.352, whole genome shotgun sequence.
ACCESSION   DANHPA010000282 DANHPA010000000
VERSION     DANHPA010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 483)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 483)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.352"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            149..343
                     /locus_tag="PTC28_002565"
                     /pseudo
     CDS             149..343
                     /locus_tag="PTC28_002565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000691527.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          183 a           72 c           85 g          143 t
ORIGIN      
        1 ttaaattcaa acaccctata agcaaaatga taaccaatac ttctagagac tcaaaaagaa
       61 aagctcaaaa atgagaatgt tgaaataaca aaaatgattg aaaaagaaga tcttgaaaga
      121 ttaatatcaa aaacaatgac attattcaat tagaaaagaa aaacaaaatg aacctgaagc
      181 agtagggttg agatggaatg gtaaagcata tacatgtagt atgggaaggt tttattcatg
      241 tgctcattat tgcggaatgt gagcaattgt aagcccaata gcaggcgcag ggtgtgaagt
      301 gatttgtggt gctgcattcg caacagcatg cgctcttaac taatttattt caattacaat
      361 attagcagcg ctgttttgac ttctgtttag ggttgattat catctcacat agcctaattt
      421 taattgtcca aatgacttta catcatcttt tctattaatg tcaccatata aaagaaacac
      481 ttt
//
LOCUS       DANHPA010000283          470 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.356, whole genome shotgun sequence.
ACCESSION   DANHPA010000283 DANHPA010000000
VERSION     DANHPA010000283.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 470)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 470)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.356"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..>470
                     /locus_tag="PTC28_002566"
     rRNA            <1..>470
                     /locus_tag="PTC28_002566"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          138 a           86 c          140 g          106 t
ORIGIN      
        1 cgtgaaattc cgtcggaatc tgggaggacc atctcctaag gctaaatact ctctagtgac
       61 cgatagtgaa ccagtaccgt gagggaaagg tgaaaagtac cccggaaggg gagtgaaaga
      121 gaacttgaaa ccgtgtgctt acaagtagtc agagcccgtt aatgggtgat ggcgtgcctt
      181 ttgtagaatg aaccggcgag ttacgatctg atgcaaggtt aagcagaaaa tgtggagccg
      241 tagcgaaagc gagtctgaat agggcgaatg agtatttggt cgtagacccg aaaccaggtg
      301 atctaccctt ggtcaggttg aagttcaggt aacactgaat ggaggaccga accgacttac
      361 gttgaaaagt gagcggatga actgagggta gcggagaaat tccaatcgaa cttggagata
      421 gctggttctc tccgaaatag ctttagggct agcctcaagt gatgattatt
//
LOCUS       DANHPA010000284          468 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.358, whole genome shotgun sequence.
ACCESSION   DANHPA010000284 DANHPA010000000
VERSION     DANHPA010000284.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 468)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.358"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(42..>468)
                     /locus_tag="PTC28_002567"
     CDS             complement(42..>468)
                     /locus_tag="PTC28_002567"
                     /inference="COORDINATES: protein motif:HMM:NF019310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDK5717769.1"
                     /translation="LSLGIVIGSILVSKLKVKSNRKFIDLSIIAHGAVFFIIGVSYNK
                     ILILLLALLFGIISVPAMIFPKTYIQENIPEQNQGRIFSLYYSFSTAGYPIGLALSGF
                     TVNMIGVRYSILAASTILIIIIAFSVIMRGFSANIKQSI"
BASE COUNT          174 a           84 c           63 g          147 t
ORIGIN      
        1 aaatttgcca ttcaaacttc tcctttaaca tgctgaaaca tttaaattga ttgtttaata
       61 tttgcactaa aacctctcat aatcaccgaa aaagcaataa taatgatgag tattgttgat
      121 gcagcaagaa tactatacct cacccctatc atattcactg taaaacctga taatgctaac
      181 cctattgggt aaccggccgt actaaacgaa taatataaag aaaatatcct accttgattt
      241 tgctcgggta tattttcttg aatataagtt ttgggaaata tcattgctgg gactgatata
      301 atgccaaata ataacgctaa caaaagtatg agaattttat tataggatac gcctataata
      361 aaaaagacgg ctccatgcgc gataatagaa agatctataa atttcctatt acttttaact
      421 ttcaatttag aaacgagtat actccctatc actatgccta aagataaa
//
LOCUS       DANHPA010000285          439 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.377, whole genome shotgun sequence.
ACCESSION   DANHPA010000285 DANHPA010000000
VERSION     DANHPA010000285.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 439)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 439)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.377"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..122
                     /locus_tag="PTC28_002568"
     CDS             <1..122
                     /locus_tag="PTC28_002568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000108743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="topoisomerase"
                     /protein_id="HDK5717770.1"
                     /translation="LLEGKETLVKGIKTKDKKSYNAVVKIGEKGYIDFISFSK"
     gene            238..>439
                     /locus_tag="PTC28_002569"
     CDS             238..>439
                     /locus_tag="PTC28_002569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000527318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-binding protein"
                     /protein_id="HDK5717771.1"
                     /translation="MGNLGAQKAKRNDTPISAKKDIMGDKTVRVRADLHHIIKIETAK
                     NGGNVKEVMEIRLRSKLKSVLIV"
BASE COUNT          192 a           57 c           90 g          100 t
ORIGIN      
        1 aattactaga gggaaaagaa accctggtaa aaggaatcaa aacgaaagat aaaaagtcct
       61 acaatgccgt tgtaaaaatt ggagaaaagg gatatattga ttttatatct ttctcaaaat
      121 aaacataaaa gccctttaaa tagggctttt atatattaat cacaaatcac ttatcacaaa
      181 tcacaagtga tttgtgataa aataagaata agaagaaata gaaagaagtg agagatcgtg
      241 ggaaatttag gcgcacagaa agcaaaacga aatgatacgc caatcagcgc aaaaaaagat
      301 ataatggggg ataagacggt tcgtgttcgt gctgacttgc accatatcat aaaaatcgaa
      361 acagcaaaga atggcggaaa cgtaaaagaa gttatggaaa taagacttag aagcaaactt
      421 aagagtgtgt tgatagtgc
//
LOCUS       DANHPA010000286          433 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.379, whole genome shotgun sequence.
ACCESSION   DANHPA010000286 DANHPA010000000
VERSION     DANHPA010000286.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.379"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
BASE COUNT          140 a           89 c           69 g          135 t
ORIGIN      
        1 ttttctctta taatagttta atttattcca ctgccagtct gtaacaatct ttcactgtca
       61 tattgttata cctagtgggt acaccaaaaa ccagttgaga cgtaattcct agctaatgcg
      121 ctaaaaagct ctaattagat agcaaaacaa tttctattga taggtatgag cgatatatga
      181 atttgatcat ttgcgcagtc atatgatttt atgtacaaaa ccctttcgca ccacttctaa
      241 aacaaagagg ttaagcaaca ttattttgct taacctcttt gttttgcgca tcagtcctat
      301 ttgacaaagc gtctcattgc gaaaaagaga gaatatacaa aaaaagcctc gaaacaataa
      361 tgattgcttc gaagcttttg aaataacctg gcaccgtcct actctcgcgg aacgtaagtc
      421 cgactaccat cgg
//
LOCUS       DANHPA010000287          432 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.381, whole genome shotgun sequence.
ACCESSION   DANHPA010000287 DANHPA010000000
VERSION     DANHPA010000287.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 432)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 432)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.381"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..>432
                     /gene="argS"
                     /locus_tag="PTC28_002570"
     CDS             <1..>432
                     /gene="argS"
                     /locus_tag="PTC28_002570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010098634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HDK5717772.1"
                     /translation="ALKNNKLLSAEKIVIDYSSPNIAKPFSMGHLRATVIGDSIAKIL
                     EANGAKVIRINHLGDWGTQFGKLIVAYKKWGEQKRVENNPILELFHLYTKFHEISKDN
                     PHIDLEAREAFKLLESGHSEYEHLWSWFRNVSMESFNALYKL"
BASE COUNT          161 a           56 c           82 g          133 t
ORIGIN      
        1 gctttaaaaa ataataaact attaagtgca gagaaaatag tcatagatta ttcaagccct
       61 aatatagcga aacctttttc tatgggtcat ttgagagcta cggttattgg agatagtatc
      121 gctaaaatac ttgaagcaaa tggagcaaaa gttattagaa taaatcattt gggagattgg
      181 ggaacacaat tcggcaagtt aatagttgct tataaaaaat ggggggaaca aaaaagagtt
      241 gaaaataacc ctatacttga gctttttcat ttgtacacaa agtttcatga aattagtaaa
      301 gataatccac atattgattt agaagccaga gaagctttca aacttttaga aagcggacat
      361 agtgaatacg aacatttatg gtcatggttt cgcaatgttt ctatggaatc ttttaatgct
      421 ttatacaagc tt
//
LOCUS       DANHPA010000288          414 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.390, whole genome shotgun sequence.
ACCESSION   DANHPA010000288 DANHPA010000000
VERSION     DANHPA010000288.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 414)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 414)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.390"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(<1..>414)
                     /locus_tag="PTC28_002571"
     CDS             complement(<1..>414)
                     /locus_tag="PTC28_002571"
                     /inference="COORDINATES: protein motif:HMM:TIGR01716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717773.1"
                     /translation="TEYWGYYELYLFTNTLDVINHETMMLLSREIVSQTKALNKLQLY
                     RRMLSAMLLNGYMTCIQRQKVKDAIFFEKCIERCLFTETEIYEKLVFQYAKHFLIYSK
                     SSSEDAINKMKKIIEVMRLVESHHIASYYENHLNH"
BASE COUNT          139 a           69 c           54 g          152 t
ORIGIN      
        1 atatggttta aatgattctc atagtaagat gcaatatgat gactttctac taagcgcata
       61 acttcaatga tttttttcat tttattgata gcgtcctcac tagaggattt actataaatt
      121 aaaaaatgct tagcatattg aaatacaagc ttttcgtaaa tttctgtttc agtaaacaaa
      181 cacctctcta tacatttttc aaaaaaaata gcatctttca ctttttgtcg ttgaatgcaa
      241 gtcatatatc catttaacaa cattgctgaa agcattcgac gatacaattg taatttatta
      301 agcgcctttg tttgtgatac tatttctcgt gataagagca tcatcgtctc atgatttata
      361 acatctaaag tatttgtaaa aagatacagc tcataatatc cccagtattc ggta
//
LOCUS       DANHPA010000289          405 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.396, whole genome shotgun sequence.
ACCESSION   DANHPA010000289 DANHPA010000000
VERSION     DANHPA010000289.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.396"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
BASE COUNT          152 a           53 c           81 g          119 t
ORIGIN      
        1 taattcgaat attttgatta ttgcgctgtt cttgaattat atttgtataa gaaggggtat
       61 gtatgagtaa agttaacatt gaaatcaaag agcttaaaca aaatgaagca gcaatgcatc
      121 aaggttgtgt aactggaccg ggtgagggcg gaactaaaga agcctaatat ttagtactga
      181 gaaattgagg caggctgcta ttggattttc atagaagcct gctctaatac ttttatagga
      241 gaaaaaaatg aataataaat ataaaataag tcctctatcc tactttacat tcgaaaacga
      301 tggaatggaa ttaacaaatt caaaatcgaa aaaacaataa ggatagattg tcccttcccc
      361 tttgttgtgc acatgaaaac ggttaaagat gttgaataca gttag
//
LOCUS       DANHPA010000290          392 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.405, whole genome shotgun sequence.
ACCESSION   DANHPA010000290 DANHPA010000000
VERSION     DANHPA010000290.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 392)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 392)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.405"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            complement(100..363)
                     /locus_tag="PTC28_002572"
     CDS             complement(100..363)
                     /locus_tag="PTC28_002572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001124190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDK5717774.1"
                     /translation="MPKIINIPTPENTFLGKEKFVKKLYAKPTNIHSMFDVSRSTIYN
                     WLTDYNKDDLGVKNLYIDYSSNMTLINIAKLEEYLLKRHKKWM"
BASE COUNT          122 a           63 c           60 g          147 t
ORIGIN      
        1 taaaatacat accactgagt gctaaaaaca acgttgatgt gaatgcagca gctgctgtca
       61 caaaccatgc aattaaattt ttcattttaa tcacctcctt tacatccact ttttatgtct
      121 ctttaaaaga tattcttcta atttggcgat gttaatcaat gtcatgttcg atgaataatc
      181 aatatagaga tttttgactc ctaaatcatc tttattataa tcagttagcc agttgtagat
      241 ggttgaacga ctaacgtcaa acattgagtg tatgttcgtt ggttttgcat acaacttttt
      301 gacgaatttt tctttaccta agaaagtatt ttcaggtgtg ggaatattaa tgattttagg
      361 cataatacgt aaactccttt cgtgtataat at
//
LOCUS       DANHPA010000291          352 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.437, whole genome shotgun sequence.
ACCESSION   DANHPA010000291 DANHPA010000000
VERSION     DANHPA010000291.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 352)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 352)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.437"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            90..272
                     /locus_tag="PTC28_002573"
     CDS             90..272
                     /locus_tag="PTC28_002573"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717775.1"
                     /translation="MDIIVERLMKDDKIQTIPRTEKDNNSLLQALCREFEIGHAYSEK
                     GGDRVVTLKKTIQYNL"
BASE COUNT          147 a           43 c           64 g           98 t
ORIGIN      
        1 aaaagggata atacaaccat taaaattctg aaatttctaa taatgaactt atcattaata
       61 ctaaagaaca tgtaacaggg ggttttagga tggacataat tgtggaaaga ttgatgaagg
      121 atgacaaaat acaaacgata ccgcgaacgg agaaggataa caactcattg cttcaagccc
      181 tttgtcgaga atttgaaatt ggacatgcgt atagtgaaaa agggggagac agagttgtca
      241 cgttaaaaaa gacaatacag tataaccttt gacatcatca aaaaatatag atacaatatg
      301 aatcattagt ttatattatt ataaatgata aaatattatt atcacattgg tt
//
LOCUS       DANHPA010000292          337 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.denovo.448, whole genome shotgun sequence.
ACCESSION   DANHPA010000292 DANHPA010000000
VERSION     DANHPA010000292.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 337)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 337)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.denovo.448"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..>337
                     /locus_tag="PTC28_002574"
     CDS             <1..>337
                     /locus_tag="PTC28_002574"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HDK5717776.1"
                     /translation="QVQGLNSKNIHTAKTINSGLSPIEKSAIARDVKNGKIDILYVSI
                     ETLISRNDIQSLIGDREIGLFVVDEAHTVTTWGRTFRVDYWFMGSYLNKLRKDYNFPI
                     VTFTATAIIG"
BASE COUNT          123 a           46 c           59 g          109 t
ORIGIN      
        1 atcaagttca aggtttaaat agtaaaaata tacatactgc aaaaactatt aactctggcc
       61 tttcacctat agaaaaatct gcaattgcaa gagacgttaa aaatggaaaa attgatatac
      121 tttatgtttc cattgaaact ctaattagta gaaacgatat acaaagttta attggcgaca
      181 gagaaattgg tctttttgta gttgatgaag cacatactgt aactacttgg ggtagaacat
      241 ttagagttga ttattggttt atgggaagtt acctaaacaa attaagaaag gattataatt
      301 tccctatcgt gacgtttaca gctactgcta tcattgg
//
LOCUS       DANHPA010000293         5036 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.guided.138, whole genome shotgun sequence.
ACCESSION   DANHPA010000293 DANHPA010000000
VERSION     DANHPA010000293.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 5036)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5036)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5036
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.guided.138"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            47..955
                     /locus_tag="PTC28_002575"
     CDS             47..955
                     /locus_tag="PTC28_002575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032491779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside nucleotidyltransferase ANT(6)-Ia"
                     /protein_id="HDK5717777.1"
                     /translation="MRSEKEMMDLVLSLAEQDERIRIVTLEGSRANINIPKDEFQDYD
                     ITYFVSDIEPFISNDDWLNQFGNIIMMQKPEDMELFPPEEKGFSYLMLFDDYNKIDLT
                     LLPLEELDNYLKGDKLIKVLIDKDCRIKRDIVPTDIDYHVRKPSAREYDDCCNEFWNV
                     TPYVIKGLCRKEILFAIDHFNQIVRHELLRMISWKVGIETGFKLSVGKNYKFIERYIS
                     EDLWEKLLSTYRMDSYENIWEALFLCHQLFRAVSGEVAERLHYAYPEYDRNITKYTRD
                     MYKKYTGKTGCLDSTYAADIEERREQ"
     gene            952..1494
                     /gene="sat4"
                     /locus_tag="PTC28_002576"
     CDS             952..1494
                     /gene="sat4"
                     /locus_tag="PTC28_002576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="streptothricin N-acetyltransferase Sat4"
                     /protein_id="HDK5717778.1"
                     /translation="MITEMKAGHLKDIDKPSEPFEVIGKIIPRYENENWTFTELLYEA
                     PYLKSYQDEEDEEDEEADCLEYIDNTDKIIYLYYQDDKCVGKVKLRKNWNRYAYIEDI
                     AVCKDFRGQGIGSALINISIEWAKHKNLHGLMLETQDNNLIACKFYHNCGFKIGSVDT
                     MLYANFENNFEKAVFWYLRF"
     gene            1587..2381
                     /locus_tag="PTC28_002577"
                     /note="aph(3')-IIIa"
     CDS             1587..2381
                     /locus_tag="PTC28_002577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032491780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase
                     APH(3')-IIIa"
                     /protein_id="HDK5717779.1"
                     /translation="MAKMRISPELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLK
                     MTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEY
                     EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE
                     EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKISGFIDLGRSGRADKW
                     YDIAFCVRSIREDIGEEQYVELFFDLLGIKPDWEKIKYYILLDELF"
     gene            2657..3229
                     /locus_tag="PTC28_002578"
     CDS             2657..3229
                     /locus_tag="PTC28_002578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001079940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HDK5717780.1"
                     /translation="MNRINRVTSILIQLQSKKIIPAKEIAQRFNISLRTVYRDIRTLE
                     EAGIPIGSEAGKGYFLVEGFLLPPVMFTAAEVGALITAGKFLNCHGDESFIKDFDSAM
                     YKIKSILKHGEKNYAQELENSINVYSTSGQKNTLADNVIAAIQTAICNKRVISIQYPA
                     SGGQEPESRMIEPISLGFYEQNWYLIGFAG"
     gene            3202..3609
                     /locus_tag="PTC28_002579"
     CDS             3202..3609
                     /locus_tag="PTC28_002579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HDK5717781.1"
                     /translation="MVLNRFCRLRNEYRNFRVDRIKSICIEEELCQSHDGSLEQILKQ
                     MLSYKKLYNVILRAEKGETYNSIKNRYSLGFLEETDLGSKMEIEFQTDSFEILSKQLI
                     EYGSGIEIVQPDELKCITRKHLAQITNHCLNLI"
     gene            3720..4379
                     /locus_tag="PTC28_002580"
     CDS             3720..4379
                     /locus_tag="PTC28_002580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RibD family protein"
                     /protein_id="HDK5717782.1"
                     /translation="MKPKIIMHTQISLDGRIKGFDNPEVYYQVAGGIHSDAVLFGSNT
                     VFTAFEKYPAETEADFEKIITSPEDPRPIGVIPDSRGILRSLHCLRNLGYLKEIVILV
                     STATPKEYLNYLEERHYPYIVSGNDHVDYEKAFQILHEQYGCKYMRTDSGGGLTNKLL
                     ENGLIDEISLVISPCFVGNKEKQLFDNLLLSEKVNLELQGTENAEHGCLSLRYAVKNK
                     D"
BASE COUNT         1676 a          816 c         1159 g         1385 t
ORIGIN      
        1 aaaagaagat gtaataatat agaaaaaata aacgaggagt atgtaaatga gatcagaaaa
       61 agaaatgatg gatttagtac tttctttagc agaacaggat gaacgtattc gaattgtgac
      121 ccttgagggg tcacgcgcaa atattaatat acctaaagat gaatttcagg attatgatat
      181 tacatatttt gtaagtgata tagaaccgtt tatatctaat gatgactggc ttaatcaatt
      241 tgggaatata ataatgatgc aaaagccgga ggatatggaa ttattcccac ctgaagaaaa
      301 gggattttcc tatcttatgc tatttgatga ttacaataaa attgatctta ccttattgcc
      361 cttggaagag ttagataatt acctaaaggg cgataaatta ataaaggttc taattgataa
      421 agattgtaga attaaaaggg acatagttcc gactgatata gattatcatg taagaaagcc
      481 aagcgcaagg gagtatgatg attgctgcaa tgaattttgg aatgtaacac cttatgttat
      541 taaaggattg tgccgtaagg aaattttatt tgctattgat cattttaatc agattgttcg
      601 ccatgagctg ctgagaatga tatcatggaa ggtcggcatc gaaacaggct ttaaattaag
      661 tgtaggcaag aactataagt ttattgaaag gtatatatcc gaggatttgt gggagaaact
      721 tttgtccacc taccggatgg attcctatga aaacatatgg gaagcattat ttctatgcca
      781 tcaattgttc agggcggtat ccggtgaggt ggcggaaagg cttcattatg cctatccgga
      841 gtatgatagg aatataacaa aatataccag ggacatgtat aaaaaataca ctggtaaaac
      901 cggctgcctg gatagcacat atgccgctga tatagaagag aggcgggaac agtgattaca
      961 gaaatgaaag cagggcacct gaaagatatc gataaaccca gcgaaccatt tgaggtgata
     1021 ggtaagatta taccgaggta tgaaaacgag aattggacct ttacagaatt actctatgaa
     1081 gcgccatatt taaaaagcta ccaagacgaa gaggatgaag aggatgagga ggcagattgc
     1141 cttgaatata ttgacaatac tgataagata atatatcttt actaccaaga cgataaatgc
     1201 gtcggaaaag ttaaactgcg aaaaaattgg aaccggtacg cttatataga agatatcgcc
     1261 gtatgtaagg atttcagggg gcaaggcata ggcagcgcgc ttatcaatat atctatagaa
     1321 tgggcaaagc ataaaaactt gcatggacta atgcttgaaa cccaggacaa taaccttata
     1381 gcttgtaaat tctatcataa ttgtggtttc aaaatcggct ccgtcgatac tatgttatac
     1441 gccaactttg aaaacaactt tgaaaaagct gttttctggt atttaaggtt ttagaatgca
     1501 aggaacagtg aattggagtt cgtcttgtta taattagctt cttggggtat ctttaaatac
     1561 tgtagaaaag aggaaggaaa taataaatgg ctaaaatgag aatatcaccg gaattgaaaa
     1621 aactgatcga aaaataccgc tgcgtaaaag atacggaagg aatgtctcct gctaaggtat
     1681 ataagctggt gggagaaaat gaaaacctat atttaaaaat gacggacagc cggtataaag
     1741 ggaccaccta tgatgtggaa cgggaaaagg acatgatgct atggctggaa ggaaagctgc
     1801 ctgttccaaa ggtcctgcac tttgaacggc atgatggctg gagcaatctg ctcatgagtg
     1861 aggccgatgg cgtcctttgc tcggaagagt atgaagatga acaaagccct gaaaagatta
     1921 tcgagctgta tgcggagtgc atcaggctct ttcactccat cgacatatcg gattgtccct
     1981 atacgaatag cttagacagc cgcttagccg aattggatta cttactgaat aacgatctgg
     2041 ccgatgtgga ttgcgaaaac tgggaagaag acactccatt taaagatccg cgcgagctgt
     2101 atgatttttt aaagacggaa aagcccgaag aggaacttgt cttttcccac ggcgacctgg
     2161 gagacagcaa catctttgtg aaagatggca aaataagtgg ctttattgat cttgggagaa
     2221 gcggcagggc ggacaagtgg tatgacattg ccttctgcgt ccggtcgatc agggaggata
     2281 tcggggaaga acagtatgtc gagctatttt ttgacttact ggggatcaag cctgattggg
     2341 agaaaataaa atattatatt ttactggatg aattgtttta gtacctagat ttagatgtct
     2401 aaaaagcttt aactacaagc tttttagaca tctaatcttt tctgaagtac atccgcaact
     2461 gtccatactc tgatgtttta tatcttttct aaaagttcgc tagatagagt tctatattag
     2521 agatgtaaag agttttggtg aagaggtttg tgagtatggc ttttataacc agggtgcaat
     2581 gagaagcact aacagcagct agcttaagaa cgcataggat atacttttta tggaagtcac
     2641 agaggaggaa taaaatttga acaggattaa cagagtaacc tctattctta ttcagctgca
     2701 atcaaaaaaa ataattcctg ccaaagaaat tgcacagcga tttaatataa gcttaaggac
     2761 agtttacaga gatatccgga cacttgaaga agccggaata ccaattggat ctgaggccgg
     2821 aaaaggatat tttcttgtag agggcttcct acttccgccg gtaatgttta cagcggcgga
     2881 agtgggtgca ttgattacag cagggaaatt tttaaattgc catggagatg aatcatttat
     2941 aaaggatttt gattcagcta tgtataaaat caaatctatt ttgaagcatg gtgaaaaaaa
     3001 ctatgcacag gagttggaga acagtattaa cgtgtacagc acatctggac agaaaaatac
     3061 attggcggat aacgttattg cagcaattca gactgcaatc tgcaataaaa gggtaatatc
     3121 aattcaatat cctgcatcag gagggcaaga accggaaagc agaatgatag agcctatatc
     3181 actggggttt tatgaacaga actggtactt aatcggtttt gcaggctaag aaatgaatat
     3241 aggaattttc gtgtggatcg gattaaaagc atttgcatag aagaagagct ctgtcaaagc
     3301 catgatggct ctttggaaca aatattaaaa caaatgcttt catataaaaa actatataat
     3361 gtaattctta gagctgaaaa aggggagaca tacaattcta tcaagaacag gtattctctc
     3421 ggcttccttg aagaaaccga tttgggaagt aaaatggaaa tcgaattcca gacagattcc
     3481 tttgagatat tgagcaagca gctgattgaa tatggatcag gcattgaaat agtccaacct
     3541 gatgaattaa aatgcataac ccgtaaacac ctggcacaaa ttacgaatca ctgcctaaac
     3601 ttgatttaga gaaagcgatt ggtctgttat gtattttttg taaggtttca tatcccctgc
     3661 tgacatacag ctgtcagtgt attatgatat tctactatca aaaaggagga ttgaaaaata
     3721 tgaaaccaaa gataattatg cacacacaaa ttagccttga tggccgcatt aaaggctttg
     3781 ataatccgga agtttactac caggttgccg ggggaattca ttcggatgcg gtgctgtttg
     3841 ggtccaatac tgtttttact gcatttgaaa aatatcctgc tgaaacagag gctgattttg
     3901 agaaaatcat aacaagcccg gaggacccca gaccaatagg agtcatacct gacagcagag
     3961 gtatcttgag aagtcttcat tgcttaagaa atcttggata tctgaaggaa attgtcattc
     4021 tggtatcaac tgccactccg aaggaatatt tgaattattt ggaggaaagg cattacccat
     4081 atattgtgtc aggaaatgat catgtggact atgaaaaagc ctttcagatc ctgcatgagc
     4141 aatatgggtg taaatacatg cggacagaca gtggcggtgg attaaccaac aaattattag
     4201 aaaacggact tattgatgaa atcagtcttg tgatatcacc atgttttgta ggtaataaag
     4261 aaaaacaact atttgataac cttctgttat ctgaaaaagt taatttggaa ttgcagggaa
     4321 cagagaatgc agaacatggc tgtctgtcat tgcgctatgc tgtgaaaaat aaggattagt
     4381 gcagcatact ttaaaaagtg tctgttggga cagtgtccta aaggaagcat aagctcatgg
     4441 ctagcggcgg tgttaaagta acggcactcg gccccaatat atagttgata tgcccctaag
     4501 cctttgaggg caaggcggtc aaccgcgcct tttccggtcc gcatacagtc gttcaatgag
     4561 ggtatcaagc tcggcaatgc ggcggtgctt ctcggtggtt cgtttcttcg ccgccgtttt
     4621 cggctaattc taattgatcc gaactgtaag gataagcaat tatccggggc tagttaagta
     4681 tcttagagag gaagataaag ataagtaaac caattttaaa gttgtaccga ataaagcctt
     4741 caagaggaca acatgctttt gaaggcttta ttgcttacaa ttacttggat tgtaacgcaa
     4801 aagcaggcac caaatcaatg aaaaatagcc tatccaggcg actgtttcag aaatatgggc
     4861 ttccgccaag gggataccag tggggtgcga catctttttt gcccactcaa ggcatgtgga
     4921 gtgtgtggcg ttgttgcgta gaaagtaagg ctggagtcct tatatctggc tgagcttaat
     4981 ctctggtaat tttgaggggg ctgacccatt agtccctttt gaaccaaaaa atcgaa
//
LOCUS       DANHPA010000294         4384 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.guided.149, whole genome shotgun sequence.
ACCESSION   DANHPA010000294 DANHPA010000000
VERSION     DANHPA010000294.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 4384)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4384)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4384
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.guided.149"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            115..612
                     /gene="dfrG"
                     /locus_tag="PTC28_002581"
     CDS             115..612
                     /gene="dfrG"
                     /locus_tag="PTC28_002581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000868795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethoprim-resistant dihydrofolate reductase
                     DfrG"
                     /protein_id="HDK5717783.1"
                     /translation="MKVSLIAAMDKNRVIGKENDIPWRIPKDWEYVKNTTKGHPIILG
                     RKNLESIGRALPDRRNIILTRDKGFTFNGCEIVHSIEDVFELCKNEEEIFIFGGEQIY
                     NLFFPYVEKMYITKIHHEFEGDTFFPEVNYEEWNEVFAQKGIKNDKNPYNYYFHVYER
                     KNLLS"
     gene            complement(684..2636)
                     /locus_tag="PTC28_002582"
     CDS             complement(684..2636)
                     /locus_tag="PTC28_002582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017431446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insertion element protein"
                     /protein_id="HDK5717784.1"
                     /translation="MTKLKRLATKEDEIVDVKIPISNEELKDRAKQYDLLTPKRFATR
                     YNKMLFLPTSFKWNGSEYPIQYNYCINPFCCNFGKEQHKFKDVKGKPSRYKMTGSSKD
                     KGHKGMYCNDNPIGRGVSQNCTVTPLSNWSVVEEIKRLIEINSIQDVEPDYQFHKEGC
                     SEEESTPFNEPKQFYKRGKSRGKSQRYQCKACKKFTNVLPKREETTTYHQQKNTILPM
                     FAKMVVGRVSVSRTCDILGIGVGTYYHKLEWLYRRCLEFLERYETQPLQTKKFNEMWL
                     NTDKMHYYLNNVRKKGQGSKKYTGFEDLNMQTYIVVSAEVLSRYVFRSDVAYDWNISM
                     DELNEDTRKFKEDHLNTFSRKNDRLDWSYYPQEPSANDSENRNAYLHELGKITNRSIF
                     VDGLNVDAPYTTTAHYWLIKQMVNADEWRMISDDDFSIRNAFYRVFTKELRLSDAHHF
                     ICQVNKTKSRKQCLKEFGQAKAELLDWGDIRGFKTKFLRTLASHYLTELLTSHQFHEE
                     AISKDGERYRKYADNPIKHPLATKDKGFYSVDCRTDLSALEPNEIAKMLLNVNDHSTN
                     SFIQQIRRYISSLERPLTTARGDKKSYIYANFNPKYAQFAITILRTYYNFCRPFKSAD
                     KKVLTPAQRLGITDKQFDWKDIIYFK"
     gene            complement(2643..2879)
                     /locus_tag="PTC28_002583"
     CDS             complement(2643..2879)
                     /locus_tag="PTC28_002583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001159903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717785.1"
                     /translation="MQFLEPKNKNAKSVDWEISEQVRVIVKQYAEYAERTESEAVDEF
                     LLNILDDKKFIEWIANKRSNKRIVEKMGIKDRVG"
     gene            complement(3116..3394)
                     /locus_tag="PTC28_002584"
                     /pseudo
     CDS             complement(3116..3394)
                     /locus_tag="PTC28_002584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000108743.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="topoisomerase"
     gene            complement(3394..4011)
                     /locus_tag="PTC28_002585"
     CDS             complement(3394..4011)
                     /locus_tag="PTC28_002585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002295591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HDK5717786.1"
                     /translation="MAKIGYARVSSKEQNLDRQLQALQGVSKVFSDKLSGQSVERLQL
                     QAMLNYIREGDIVVVTELDRLGRNNKELTELMNQIQIKGATLEVLNLPSMNGIEDENL
                     RRLINNLVIELYKYQAESERKRIKERQAQGIEIAKKKGKFKGRQLKFKENDPRLQHAF
                     DLFLNGCSDKEVEEQTGINRRTFRRYRARYNVTVDQRKNNEKRDS"
     gene            complement(4025..4195)
                     /locus_tag="PTC28_002586"
     CDS             complement(4025..4195)
                     /locus_tag="PTC28_002586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000713595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717787.1"
                     /translation="MKKFIYRVLENDEVVAIFNEQQYAQDFIAYEKTISDKQFEIEKV
                     DIADWLLQPREF"
BASE COUNT         1301 a          826 c          689 g         1568 t
ORIGIN      
        1 atataactta tagaaaaaat tgcttattca actaacgggc aggataatga gaaaaggttt
       61 tttgatagaa ataagaaatt agatggtaaa ttagttaaaa aggctgtgtt ataaatgaaa
      121 gtttctttga ttgctgcgat ggataagaat agagtgattg gcaaagagaa tgacattcct
      181 tggaggattc ccaaggactg ggaatatgtt aaaaatacta caaagggaca tccgataata
      241 ttaggtagga agaaccttga atcaatcgga agagccttac ctgacagaag aaatattatt
      301 ctgacgagag ataaggggtt tacctttaat ggttgtgaaa ttgttcattc aatagaagat
      361 gtttttgagt tatgtaaaaa cgaagaagaa atttttattt tcggaggaga acagatttat
      421 aatttgtttt tcccttatgt tgagaaaatg tacatcacaa aaatacatca tgaattcgaa
      481 ggagatactt tttttccaga agtgaattat gaggaatgga atgaggtatt tgcccaaaaa
      541 gggataaaga atgataaaaa tccgtataac tactattttc atgtatatga aagaaaaaac
      601 ttattgagtt aacgggtgcg ttaattgaag aagaacagta aagataaagc acaagagctt
      661 gggattactc caagctcttt ttgtcatttg aaataaatta tatctttcca atcaaattgt
      721 ttatctgtaa tccctaatct ttgagcaggt gtcaaaacct ttttatccgc tgatttaaaa
      781 gggcgacaaa agttgtagta agttcttaga attgtaatcg caaattgagc atacttcgga
      841 ttgaagttag cgtaaatata gctcttctta tcaccacgag ctgttgttaa tggtctttca
      901 agagatgata tataacgtct tatctgttga ataaagctat tggtcgaatg gtcattaaca
      961 tttaatagca tctttgcgat ttcgtttggt tccagagcag ataaatccgt tctacaatca
     1021 actgaataaa atcctttatc cttagtggct aatggatgtt tgatagggtt atcggcatat
     1081 ttgcgatatc tttctccatc tttactaata gcctcttcgt ggaattgatg acttgttagt
     1141 aattcagtta gataatgaga tgccaaagtc cgtagaaact ttgttttgaa tcctctgata
     1201 tctccccaat cgagcagttc tgcttttgct tgtccgaatt cttttaagca ttgttttctg
     1261 cttttcgtct tgttaacttg gcaaataaaa tgatgtgcat cgctcaacct taattctttc
     1321 gtgaatactc tataaaaggc gtttctaata gagaagtcat catcactaat cattcgccat
     1381 tcgtcggcat taaccatttg tttaattaac caatagtgag cagttgtagt ataaggagca
     1441 tcaacattta aaccatcgac aaatatactc ctattagtaa ttttccctaa ttcgtgaaga
     1501 taagcattcc tattttcgct atcgttagcg gatggttctt gtggataata agaccaatct
     1561 aacctatcat ttttacgact aaaagtattg agatggtctt ctttgaattt tcttgtatct
     1621 tcatttaatt catccattga aatattccaa tcataggcaa catcagaacg gaacacatat
     1681 cttgataaga cctcagcaga tacaactata tacgtttgca tattaaggtc ttcaaacccc
     1741 gtatatttct ttgaaccttg tcctttctta cggacgttat ttaggtagta gtgcatcttg
     1801 tccgtattaa gccacatctc gttaaatttc tttgtttgaa ggggttgtgt ctcatatcgt
     1861 tctaaaaact ccaaacaacg cctatacagc cactccagct tatgatagta ggttccaact
     1921 ccaattccta aaatatcaca agtacgactg actgaaaccc ttccaacaac catcttagcg
     1981 aacattggaa gaatggtgtt cttttgttgg tgataagtag tggtttcttc tctttttggt
     2041 agaacattag tgaacttctt acacgcctta cattgatagc gttgagattt gcccctactt
     2101 ttcccccttt tgtaaaattg cttcggctca ttgaatgggg ttgattcttc ttccgagcag
     2161 ccttctttat gaaattgata atctggctca acatcttgga tgctattgat ttctataagg
     2221 cgtttaattt cttcaacaac agaccaatta gataaagggg ttactgtaca gttttgcgat
     2281 acacctctgc caataggatt gtcattgcag tacatacctt tatgaccttt atctttggaa
     2341 ctaccagtca ttttatatcg acttggtttc ccttttacat ctttgaattt gtgctgttct
     2401 ttcccaaaat tacaacaaaa cggattgatg cagtaattat attgaatggg atattcagaa
     2461 ccgttccatt taaaagacgt tggcaagaac aacattttgt tataccttgt tgcaaatcgt
     2521 tttggagtta ataaatcata ttgtttagcc ctatctttta attcttcgtt tgaaatcgga
     2581 attttaacat ctacaatttc atcttccttc gtggctaatc ttttaagctt ggtcattgtc
     2641 tatcaaccca ctctatcttt gatacccatt ttttcaacaa tccgcttatt acttcgcttg
     2701 ttggcaatcc attcaataaa cttcttatcg tctaaaatgt tcaataagaa ttcatccact
     2761 gcttcgcttt cagtacgctc tgcatattca gcgtattgct taactatcac ccttacttgc
     2821 tctgatattt cccaatccac agacttagcg ttcttatttt ttggctcaag aaattgcata
     2881 ggaaaatgca cccctttttg cttagtaaat tgtaaccatt ttaacacacc aatttgcatt
     2941 cctacaataa ttatttcacg ttcgcatttt tatatacatt ttaacttaca ttttgtggtg
     3001 taaattaaca acaaacgttg atttaacaat aaaaaacgag tatcaaattc agttgcaatt
     3061 tgatactcat ttaggtttac attttcactt tttgtactcc aaaactgaac tacttaacaa
     3121 ttttaaactg ctttttttta tctgttgcca cttcaaaatc gtatcgatca ggaaaaatag
     3181 gcaatgattc aagtttccaa ttttgccact tttcgtcata atgacctggt tctgctaatt
     3241 ccactaaatg cccaaaacca aaggtgataa acgtttcatc tgtaaatagt gggtctttga
     3301 tctcaaaata accgtctttt ttggtgcttt gttttaaagc acttgcgtag gctaatgcct
     3361 ggcttggttt ttcagctaaa ataaccgtac tcattaacta tccctctttt cattgttttt
     3421 tctttgatct actgtcacgt tatatcttgc tcgatacctt ctaaacgttc ggcgattgat
     3481 tccagtttgt tcttcaactt ctttatcgga acaaccattc aaaaataaat cgaaagcgtg
     3541 ttgtaaacgt ggatcatttt ctttgaattt cagttgccga cctttgaatt ttcctttttt
     3601 cttagcaatt tcaattcctt gggcttggcg ttctttaatt cgtttgcgtt cagattccgc
     3661 ttggtactta tacaattcaa tcactaaatt attaatcagc cgtcttaaat tttcatcttc
     3721 aataccattc attgagggta aatttaagac ttccagggtt gcccccttaa tttgaatttg
     3781 attcatcaat tctgttaatt ctttattatt tcgtcctaat cgatctaatt cagtaacaac
     3841 aactatatcc ccttcacgaa tatagttaag catagcttgt aattgtaggc gttcgaccga
     3901 ttgaccgctt aatttgtctg aaaagacctt agaaacgccc tgtaacgctt gtaattgccg
     3961 atctaagttc tgttctttgc tactgacacg tgcataacca attttagcca ttttcaacca
     4021 acctctaaaa ttctctcggt tgcaataacc aatcagctat atctactttt tcaatttcaa
     4081 attgcttatc agaaattgtc ttttcgtaag cgataaaatc ttgcgcatat tgttgctcat
     4141 taaaaatagc caccacttcg tcattttcta aaactcgata aataaatttt ttcattttac
     4201 tcctcctatt atgcccaact taaatgacct attcaccaag tcaattatac tgctaaaacc
     4261 atattaggac aaataagtat actctattga cctataaatg atagcaactt aaaagatcaa
     4321 gtgttcgctt cgctctcact gcccctcgac gttttagtag cctttccctc acttcgttca
     4381 gtcc
//
LOCUS       DANHPA010000295         3825 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.guided.159, whole genome shotgun sequence.
ACCESSION   DANHPA010000295 DANHPA010000000
VERSION     DANHPA010000295.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3825)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3825)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3825
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.guided.159"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            1..648
                     /locus_tag="PTC28_002587"
     CDS             1..648
                     /locus_tag="PTC28_002587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002331392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type A-7 chloramphenicol O-acetyltransferase"
                     /protein_id="HDK5717788.1"
                     /translation="MTFNIIELENWDRKEYFEHYFNQQTTYSITKEIDITLFKDMIKK
                     KGYEIYPSLIYAIMEVVNKNKVFRTGINSENKLGYWDKLNPLYTVFNKQTEKFTNIWT
                     ESDKNFISFYNNYKNDLLEYKDKEEMFPKKPIPENTIPISMIPWIDFSSFNLNIGNNS
                     SFLLPIITIGKFYSENNKIYIPVALQLHHSVCDGYHASLFMNEFQDIIHRVDDWI"
     gene            928..2187
                     /locus_tag="PTC28_002588"
     CDS             928..2187
                     /locus_tag="PTC28_002588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002493196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid recombination protein"
                     /protein_id="HDK5717789.1"
                     /translation="MSYSIVRVSKVKSGTNTTGIQKHVQRENNNYENEDIDHSKTHLN
                     YDLVNDNKKNFNNLIDEKIEQNYTGKRKIRTDAVKHIDGLITSDKEFFDNQTPEDTKQ
                     FFEHAKEFLEQEYGKDNLLYATVHMDEKTPHMHYGVVPITDDGRLSAKEVVGNKKALT
                     EFQDRFNEYVNQRGYDLERGQSRQVTNAKHEQISQYKQKTEYHKQEYERESQKSDYIK
                     QKNDKLMQEYQKSLNTLKKPINVPYEQETEKVGGLFNKETQETGNIVISQEDFNAFQK
                     QIEAAQSISDDYERIKSGDKLNEMEKEYKEVRDTFLKTYEMYQGLQQENRELKEENKE
                     IKDDLDKTNKLLYHCKIAISKLLEELNRMFERREFVDKIRGLGKDNDQVLNVMRIIDK
                     ENNPQHYQEQKQEEQKSEPKRDRGMSR"
     gene            2712..3656
                     /locus_tag="PTC28_002589"
     CDS             2712..3656
                     /locus_tag="PTC28_002589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017722130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HDK5717790.1"
                     /translation="MSKKEQRIFSNQSIGRENSNFVKTGYSNSRLSGQTLGKSQPALS
                     FDAMTIVGNLNKTNAKKLSDFMSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADT
                     WDRRNMRVEFNPNKLTHEEMIWLKQNIIDYMEDDGFTRLDLAFDFEDDLSDYYAMTDK
                     AVKKTVFYGRNGKPETKYFGVRDSDRFIRIYNKKQERKDNADVEVVSEHLWRVEVELK
                     RDMVDYWNDCFNDLHILKPAWATLEKINEQAMVYTLLHEESMWGKLSKNTKTKFKKLI
                     REISPIDLTELMKSTLKANEKQLQKQIDFWQREFRFWK"
BASE COUNT         1537 a          454 c          667 g         1167 t
ORIGIN      
        1 atgactttta atattattga attagaaaat tgggatagaa aagaatattt tgaacactat
       61 tttaatcagc aaactactta tagcattact aaagaaattg atattacttt gtttaaagat
      121 atgataaaaa agaaaggata tgaaatttat ccctctttaa tttatgcaat tatggaagtt
      181 gtaaataaaa ataaagtgtt tagaacagga attaatagtg agaataaatt aggttattgg
      241 gataagttaa atcctttgta tacagttttt aataagcaaa ctgaaaaatt tactaacatt
      301 tggactgaat ctgataaaaa cttcatttct ttttataata attataaaaa tgacttgctt
      361 gaatataaag ataaagaaga aatgtttcct aaaaaaccga tacctgaaaa caccataccg
      421 atttcaatga ttccttggat tgattttagt tcatttaatt taaatattgg taacaatagc
      481 agctttttat tgcctattat tacgataggt aaattttata gtgagaataa taaaatttat
      541 ataccagttg ctctgcaact tcatcattct gtatgtgatg gttaccatgc ttcactattt
      601 atgaatgaat ttcaagatat aattcatagg gtagatgatt ggatttagtt tttagatttt
      661 gaaagtgaat ttaattttat acacgtaagt gatcataaaa tttatgaacg tataacaacc
      721 accatttttg gttgctggtg ttttgatttt gaatttggtt ttgaacttat ggactgactt
      781 gttcagtcca ttttttgtgc ttgcacaaaa acatgtttta gcctcgcaga gcatacgatt
      841 taatgactta ttgcaaaata agtctagtat cttagactta aactattaaa tacacatgaa
      901 acctttgtgc ttaggagtga tttttatatg tcttattcca ttgttagagt ttcaaaagtt
      961 aaatctggaa caaatacaac aggtattcaa aaacatgttc aaagagaaaa taataattat
     1021 gaaaatgaag atatagacca tagtaaaaca catttaaatt atgatttagt aaatgacaat
     1081 aaaaaaaact ttaataactt gattgatgag aaaatagaac aaaattatac aggaaaaaga
     1141 aagattagaa cagatgcagt taaacacatt gacggtttaa ttacgtcaga taaggaattt
     1201 tttgataatc agacaccaga agatacaaaa cagttttttg aacatgctaa agaattttta
     1261 gaacaagaat acggtaaaga taatttatta tatgcaacag ttcatatgga cgagaaaaca
     1321 ccacatatgc attatggcgt tgtgcctata actgatgacg gtcgtttaag tgcaaaagaa
     1381 gttgtaggga ataaaaaggc tttaacagag tttcaagata gatttaacga atatgttaat
     1441 caacgtggtt atgatctgga acgtgggcaa tcaagacaag ttacaaatgc aaagcatgag
     1501 caaataagtc agtataagca gaaaacagaa tatcataaac aagaatatga gcgtgagagc
     1561 caaaaatcag actatataaa gcaaaaaaac gataaattga tgcaagagta tcaaaaatca
     1621 ttaaatacgc ttaaaaagcc tataaatgtt ccatatgagc aagaaactga aaaagtaggt
     1681 ggtttattta acaaagaaac acaagaaact ggaaatattg taataagcca agaagatttt
     1741 aatgcttttc aaaagcaaat agaagctgca caatcaatct cagatgacta tgaacgtatt
     1801 aagtctggag ataaattaaa tgaaatggaa aaggaatata aagaagttag agataccttt
     1861 ttaaaaacat atgagatgta tcaaggttta caacaagaaa atagagaatt gaaagaagag
     1921 aataaagaga taaaagatga tttggataaa actaataaac ttttatatca ctgtaaaatt
     1981 gctatttcta agttgttaga agaattgaat cgtatgtttg aaagaagaga atttgtagat
     2041 aaaatacgag ggttagggaa agataatgac caagttctga atgttatgcg tattatagac
     2101 aaagagaata atcctcaaca ttatcaagaa caaaaacaag aagaacaaaa aagtgagcca
     2161 aaacgtgata gaggtatgag tagataaaaa aactgctgtt aatcagcact ctcaatgtga
     2221 taacagcagt ttcaaacctc attcaaaacc tatttagata ataggttaaa gggactaact
     2281 tcccacgtgc gtattataac aagaacacgc tattatgccg agaaaatcta tttgtcgatg
     2341 agagccctta attagactta aagcgccagc ggtcaatagc gtcagctatt aaatcgaccg
     2401 atggacagct ttaggattat taaggagcgc agaatcgtcg gcaaatagag gaattggaat
     2461 aatgcaataa actaaaaagt cttgatctaa atagaccaag acttttgata gtgttatatt
     2521 aataacaaaa taaaaataag aagtcgtcca ctccccgacc aaagtttgtg gaacgaccag
     2581 accaaatata ctgattatgt tatttgtaat ttttgtataa ttagatatta aacgatattt
     2641 gattatactt caacatttac atttgacgat tgggtggacg acttcttaaa aattaaggag
     2701 tcgatttttt tatgagtaaa aaagaacaac gaatcttttc aaatcaaagc ataggaagag
     2761 aaaattcaaa ttttgttaaa accggatact ctaatagccg gttaagtggt caaactttgg
     2821 gaaaatctca acccgcatta agttttgatg ccatgacaat cgttggaaat ttgaacaaaa
     2881 ctaatgctaa aaagctatct gactttatga gtgtagagcc acaaatacga ctttgggata
     2941 tacttcaaac aaagtttaaa gctaaggcac ttcaagaaaa agtttatatc gaatatgaca
     3001 aagtaaaagc agatacttgg gatagacgta atatgcgtgt tgaatttaat cccaataaac
     3061 tcacacatga agaaatgatt tggttaaaac aaaatattat cgactacatg gaagatgacg
     3121 gttttacaag attagactta gcttttgatt ttgaagatga tttgagcgat tactatgcaa
     3181 tgactgataa agcagttaag aaaactgttt tttatggtcg taatggcaag ccagaaacaa
     3241 aatattttgg tgtccgtgat agtgatagat ttattagaat ttataataaa aaacaagaac
     3301 gtaaagataa cgcagatgtt gaagttgtgt ctgaacattt atggcgtgta gaagttgaat
     3361 taaaaagaga tatggttgat tactggaatg attgttttaa tgatttacac atcttgaaac
     3421 ctgcgtgggc tactttagaa aaaattaatg agcaagctat ggtttatact ttgttgcatg
     3481 aagaaagtat gtggggaaag ctaagtaaga atactaagac taaatttaaa aaattgatta
     3541 gagaaatatc tccaattgat ttaacggaat taatgaaatc gactttaaaa gcgaacgaaa
     3601 aacaattgca aaagcagatt gatttttggc aacgtgaatt taggttttgg aagtaaaata
     3661 agttttattt tataaaaatt gctaattcag tataattaat atttacgagg tgacataacg
     3721 tatgaaaaaa tcagaggatt attcctccta aatataaaaa tttaaaattt aggaggaagt
     3781 tatatatgac ttttaatatt attgaattag aaaattggga tagaa
//
LOCUS       DANHPA010000296         3575 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.guided.165, whole genome shotgun sequence.
ACCESSION   DANHPA010000296 DANHPA010000000
VERSION     DANHPA010000296.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 3575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3575
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.guided.165"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..1787
                     /gene="mec"
                     /locus_tag="PTC28_002590"
     CDS             <1..1787
                     /gene="mec"
                     /locus_tag="PTC28_002590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001801873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PBP2a family beta-lactam-resistant peptidoglycan
                     transpeptidase"
                     /protein_id="HDK5717791.1"
                     /translation="VKDINIQDRKIKKVSKNKKRVDAQYKIKTNYGNIDRNVQFNFVK
                     EDGMWKLDWDHSVIIPGMQKDQSIHIENLKSERGKILDRNNVELANTGTAYEIGIVPK
                     NVSKKDYKAIAKELSISEDYIKQQMDQNWVQDDTFVPLKTVKKMDEYLSDFAKKFHLT
                     TNETESRNYPLGKATSHLLGYVGPINSEELKQKEYKGYKDDAVIGKKGLEKLYDKKLQ
                     HEDGYRVTIVDDNSNTIAHTLIEKKKKDGKDIQLTIDAKVQKSIYNNMKNDYGSGTAI
                     HPQTGELLALVSTPSYDVYPFMYGMSNEEYNKLTEDKKEPLLNKFQITTSPGSTQKIL
                     TAMIGLNNKTLDDKTSYKIDGKGWQKDKSWGGYNVTRYEVVNGNIDLKQAIESSDNIF
                     FARVALELGSKKFEKGMKKLGVGEDIPSDYPFYNAQISNKNLDNEILLADSGYGQGEI
                     LINPVQILSIYSALENNGNINAPHLLKDTKNKVWKKNIISKENINLLTDGMQQVVNKT
                     HKEDIYRSYANLIGKSGTAELKMKQGETGRQIGWFISYDKDNPNMMMAINVKDVQDKG
                     MASYNAKISGKVYDELYENGNKKYDIDE"
     gene            complement(1833..2261)
                     /locus_tag="PTC28_002591"
     CDS             complement(1833..2261)
                     /locus_tag="PTC28_002591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000872606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HDK5717792.1"
                     /translation="MKYDDFIVGETFKTKSLHITEEEIIQFATTFDPQYMHIDKEKAE
                     QSRFKGIIASGMHTLSISFKLWVEEGKYGEEVVAGTQMNNVKFIKPVYPGNTLYVIAE
                     ITNKKSIKKENGLVTVSLSTYNENEEIVFKGEVTALINNS"
     gene            complement(2358..3101)
                     /locus_tag="PTC28_002592"
     CDS             complement(2358..3101)
                     /locus_tag="PTC28_002592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001830227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphoryl diester phosphodiesterase"
                     /protein_id="HDK5717793.1"
                     /translation="MLTVYGHRGLPSKAPENTIASFKAASEVEGINWLELDVAITKDE
                     QLIIIHDDYLERTTNMSGEITELNYDEIKDASAGSWFGEKFKDEHLPTFDDVVKIANE
                     YNMNLNVELKGITGPNGLALSKSMVKQVEEQLTNLNQNQEVLISSFNVVLVKLAEEIM
                     PQYNRAVIFHTTSFREDWRTLLDYCNAKIVNTEDAKLTKAKVKMVKEAGYELNVWTVN
                     KPARANQLANWGVDGIFTDNADKMVHLSQ"
BASE COUNT         1261 a          592 c          535 g         1187 t
ORIGIN      
        1 gcgttaaaga tataaacatt caggatcgta aaataaaaaa agtatctaaa aataaaaaac
       61 gagtagatgc tcaatataaa attaaaacaa actacggtaa cattgatcgc aacgttcaat
      121 ttaattttgt taaagaagat ggtatgtgga agttagattg ggatcatagc gtcattattc
      181 caggaatgca gaaagaccaa agcatacata ttgaaaattt aaaatcagaa cgtggtaaaa
      241 ttttagaccg aaacaatgtg gaattggcca atacaggaac agcatatgag ataggcatcg
      301 ttccaaagaa tgtatctaaa aaagattata aagcaatcgc taaagaacta agtatttctg
      361 aagactatat caaacaacaa atggatcaaa attgggtaca agatgatacc ttcgttccac
      421 ttaaaaccgt taaaaaaatg gatgaatatt taagtgattt cgcaaaaaaa tttcatctta
      481 caactaatga aacagaaagt cgtaactatc ctctaggaaa agcgacttca catctattag
      541 gttatgttgg tcccattaac tctgaagaat taaaacaaaa agaatataaa ggctataaag
      601 atgatgcagt tattggtaaa aagggactcg aaaaacttta cgataaaaag ctccaacatg
      661 aagatggcta tcgtgtcaca atcgttgacg ataatagcaa tacaatcgca catacattaa
      721 tagagaaaaa gaaaaaagat ggcaaagata ttcaactaac tattgatgct aaagttcaaa
      781 agagtattta taacaacatg aaaaatgatt atggctcagg tactgctatc caccctcaaa
      841 caggtgaatt attagcactt gtaagcacac cttcatatga cgtctatcca tttatgtatg
      901 gcatgagtaa cgaagaatat aataaattaa ccgaagataa aaaagaacct ctgctcaaca
      961 agttccagat tacaacttca ccaggttcaa ctcaaaaaat attaacagca atgattgggt
     1021 taaataacaa aacattagac gataaaacaa gttataaaat cgatggtaaa ggttggcaaa
     1081 aagataaatc ttggggtggt tacaacgtta caagatatga agtggtaaat ggtaatatcg
     1141 acttaaaaca agcaatagaa tcatcagata acattttctt tgctagagta gcactcgaat
     1201 taggcagtaa gaaatttgaa aaaggcatga aaaaactagg tgttggtgaa gatataccaa
     1261 gtgattatcc attttataat gctcaaattt caaacaaaaa tttagataat gaaatattat
     1321 tagctgattc aggttacgga caaggtgaaa tactgattaa cccagtacag atcctttcaa
     1381 tctatagcgc attagaaaat aatggcaata ttaacgcacc tcacttatta aaagacacga
     1441 aaaacaaagt ttggaagaaa aatattattt ccaaagaaaa tatcaatcta ttaactgatg
     1501 gtatgcaaca agtcgtaaat aaaacacata aagaagatat ttatagatct tatgcaaact
     1561 taattggcaa atccggtact gcagaactca aaatgaaaca aggagaaact ggcagacaaa
     1621 ttgggtggtt tatatcatat gataaagata atccaaacat gatgatggct attaatgtta
     1681 aagatgtaca agataaagga atggctagct acaatgccaa aatctcaggt aaagtgtatg
     1741 atgagctata tgagaacggt aataaaaaat acgatataga tgaataacaa aacagtgaag
     1801 caatccgtaa cgatggttgc ttcactgttt tattatgaat tattaataag tgctgttact
     1861 tctcccttaa atacaatttc ttcattttca ttgtatgttg aaagtgacac tgtaacgagt
     1921 ccattttctt tttttatgga tttcttattt gtaatttcag cgataacgta caatgtatta
     1981 cctgggtata caggtttaat aaatttaacg ttattcattt gtgttcctgc tacaacttct
     2041 tctccgtatt taccttcttc tacccataat ttaaatgata ttgaaagtgt atgcatgcca
     2101 gatgcaatga tacctttaaa tctactttgt tctgcttttt ctttatctat atgcatatat
     2161 tgaggatcaa aagttgttgc aaattggata atttcttctt ctgtaatatg aaggcttttt
     2221 gttttgaatg tttctcctac tataaaatca tcgtatttca tatatgtctc tctttcttat
     2281 tcaaattaat tttttagtat gtaacatgtt aaaggtaagt ctaccgtcac tgaaacgtaa
     2341 gactcacctc taactttcta ttgagacaaa tgcaccattt tatctgcatt gtctgtaaag
     2401 ataccatcaa ctccccaatt agcaagttgg tttgcacgtg ctggtttgtt tacagtccat
     2461 acgttcaatt cataacccgc ttcttttacc atttttactt ttgctttagt aagtttggca
     2521 tcttcagtgt ttactatttt agcattacag taatctaaaa gtgttctcca gtcttcacga
     2581 aacgaagttg tatggaatat aactgctctg ttatattgtg gcatgatttc ttctgcaagt
     2641 ttaacaagca caacattaaa gcttgaaatg agcacttctt gattctgatt taagtttgtt
     2701 aattgttctt ccacttgctt aaccatactt ttagaaagtg ctagtccatt cggtccagta
     2761 atacctttta attctacatt taaattcata ttatattcat ttgctatttt tactacatca
     2821 tcgaaagttg gcaaatgttc atctttgaat ttttcaccaa accaagatcc tgcagaagca
     2881 tctttaattt catcataatt caattcagtt atttccccgg acatatttgt agtccgttct
     2941 aaataatcat catgaatgat aatcagttgt tcatcttttg taattgcaac atctaactcc
     3001 aaccagttta taccttctac ttctgaagca gctttaaatg atgcaattgt attttccgga
     3061 gctttactag gtaatcctct atgtccatat acagttagca tattacctct ccttgcattt
     3121 ttattttttt aattaacgta actgtattat cacattaatc gcacttttat ttccattaaa
     3181 aagagatgaa tatcataaat aaagaagtcg atagattcgt attgattatg gagttaatct
     3241 acgtctcatc tcatttttaa aaaatcattt atgtcccaag ctccattttg taatcaagtc
     3301 tagtttttct gtacccctta tctgcaattt tacttaggat tgcttttaac ttacctctta
     3361 tctgcaattt tacttaggat tgcttttaac ttacccctta tcagcaattt tactgagaac
     3421 tgcttttaac gcacctctta tctgcaattt tgcctagaac tgcttttaac gtacctctta
     3481 tctgcaattt tacttagaac tgcttttaac gtacctctta tctgtaattt tactgagaac
     3541 tgcttttaac aaacctctta tctgcaattt tactt
//
LOCUS       DANHPA010000297         2684 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.guided.185, whole genome shotgun sequence.
ACCESSION   DANHPA010000297 DANHPA010000000
VERSION     DANHPA010000297.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 2684)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2684)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2684
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.guided.185"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            78..1031
                     /locus_tag="PTC28_002593"
     CDS             78..1031
                     /locus_tag="PTC28_002593"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HDK5717794.1"
                     /translation="MNPFDAAYHDLCKEILEIGNQRDDRTATGTISKFGHQLRFDLSK
                     GFPLLTTKKVSFKLVATELIWFIRGDTNLRYLLQYNNNIWNEWAFEKYVQSEDYTGPD
                     MTDFGHRAQSDAAFAETYREEMTKFKQQILTDDDFMKKHGDLGNVYGKQWRNWVSANG
                     QQYDQLKALIEQIKTNPNSRRHIISAWNPTEIETMALPPCHTLFQFYVQDNKLSCQLY
                     QRSADIFLGVPFNIASYSLLTHLIAKECGLEVGEFVHTFGDAHIYSNHLDAVKTQLAR
                     SSFAPPELKINTDRSIFDIEYEDLEIVNYESHPAIKAPIAV"
     gene            1050..1529
                     /locus_tag="PTC28_002594"
     CDS             1050..1529
                     /locus_tag="PTC28_002594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HDK5717795.1"
                     /translation="MTLSILVAHDQQRGIGFEGQLPWYLPNDLKHVKKLTTGHTLVMG
                     RATYESIGKPLPYRRNVVITSNPDFKPDGVEVIHSIEEIDAIGDDHIFIFGGQTLFET
                     FIDRVDDMYITVIDDKFQADTFFPPYTFEDWEVTSAVEGTVDEKNKYPHTFLHLTRK"
     gene            1548..2402
                     /locus_tag="PTC28_002595"
     CDS             1548..2402
                     /locus_tag="PTC28_002595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014613922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HDK5717796.1"
                     /translation="MQQRIIVTDSTSDLDHAFLKQHNVHIVPLSVTINGESYEDQKDI
                     SSESFSQYLGDSSYDFKTSQPPIGRFVETYEKLGQNGAEIISIHLSSGLSGTYQTAVQ
                     ASEMVDAKVTVIDSKSISFGLGYQLQNAIRWVEEGIPTEEIISKLQNLQKNIKLYVII
                     GQLDQLIKGGRISKTKGLIGNLMKIKPIGSVIDGKLEMIHNARTQNASIKYVLKDLKP
                     FVGDASIKSIGISHAKAKDFMDKFKEKLDETFTVQNFDFGHTTPVISTHTGAGAIGLV
                     VLKDSSDS"
     gene            2420..>2684
                     /gene="msrA"
                     /locus_tag="PTC28_002596"
     CDS             2420..>2684
                     /gene="msrA"
                     /locus_tag="PTC28_002596"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001831118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDK5717797.1"
                     /translation="MALATLAGGCFWCLVKPFDTFDGVERVTSGYSGGTVENPTYEQV
                     CTNTTGHVEAVQIEYDDNVISYDDILDIYFKTFDPTDKNGQFFD"
BASE COUNT          901 a          455 c          525 g          803 t
ORIGIN      
        1 ctgcgcatac gttgatatcg ctttgaaaat ggcgtaaaat cgtctattat agatactaag
       61 agaaagaggt gaatgtcatg aatccgtttg atgcagctta tcacgattta tgtaaagaaa
      121 tattagaaat tggcaatcaa cgtgatgacc gaacagctac gggaacaatt tcaaaatttg
      181 gacatcagtt gcgttttgac ctttcaaaag gcttcccatt gttaacaaca aaaaaagttt
      241 cttttaaact tgttgcaact gaattgattt ggtttattcg tggtgatacg aatttaagat
      301 atttattaca atataataac aatatttgga acgaatgggc ttttgaaaaa tatgtacaaa
      361 gcgaagatta cacagggcca gatatgactg actttggtca tagagcacaa agtgacgcgg
      421 catttgctga aacttatcgc gaagaaatga caaagtttaa acaacagatt ttaactgatg
      481 atgattttat gaaaaagcac ggggatttag gcaatgttta tggtaagcaa tggcgtaact
      541 gggttagtgc aaacggtcaa caatacgatc aattgaaggc actaattgaa caaattaaaa
      601 cgaatcctaa ctcacgtcgt catatcatta gtgcttggaa tcctactgaa attgagacaa
      661 tggcgttacc tccttgtcat acactctttc aattttatgt acaagataat aagctaagct
      721 gtcaactcta tcaacggagc gccgacattt ttttaggtgt accgtttaat atagcgagct
      781 atagcttatt aacacattta attgcgaaag aatgtggcct tgaagtaggc gaatttgtcc
      841 acacatttgg tgatgcacat atttacagca accatttaga tgctgtgaaa acgcaattag
      901 cacgttcaag ttttgcgccg ccagaattaa aaatcaatac agatcgttct attttcgaca
      961 ttgaatatga agatttagag attgtaaatt atgaatctca tccagcgatt aaagcaccta
     1021 tcgcggtata aacaaaaagg agtaatcata tgacattatc tattttagtc gcacatgacc
     1081 aacaacgtgg cattggcttt gaaggacagt taccatggta cttacccaat gacttaaagc
     1141 atgttaaaaa actgacaact ggacatacac ttgtaatggg acgcgcgaca tacgaatcca
     1201 ttggtaaacc gttaccttat cgtagaaatg ttgttattac gagtaatcct gatttcaaac
     1261 cagacggcgt ggaggtcatt catagcattg aagaaattga tgcgattggc gatgaccaca
     1321 tctttatttt tggcggtcaa acgttattcg aaacttttat tgaccgtgtt gacgatatgt
     1381 atatcactgt tatcgacgac aaattccaag cagatacatt tttcccacca tacacatttg
     1441 aagattggga agtgacatct gctgtagaag gcaccgtgga tgaaaagaat aaatatccgc
     1501 acactttttt acatctcact cgaaagtaat tattggaggt tagcattatg caacaacgta
     1561 ttattgttac agattctaca tctgacttag atcacgcttt tctgaagcaa cacaatgtcc
     1621 atattgttcc gttgagtgtt acaattaacg gagaatctta tgaggatcaa aaggacattt
     1681 catctgagtc tttttcacaa tatttaggag acagtagcta tgattttaaa acgagccaac
     1741 ctccaattgg aagatttgta gaaacctatg aaaaactagg tcaaaacggt gctgaaatta
     1801 ttagtattca tctttcatcg gggttaagtg gcacgtatca aaccgctgtt caagcgagtg
     1861 aaatggttga cgctaaagtg acagtcattg attctaaatc aatttctttc ggcttaggct
     1921 atcaacttca aaatgcgatt cgctgggttg aggaaggcat tccaacagag gaaattatct
     1981 caaaacttca aaacttgcaa aaaaacatta agctttacgt gattatcggt caattagatc
     2041 aactcatcaa aggtggacgt attagcaaaa caaaaggttt aatcggtaat cttatgaaaa
     2101 tcaagccaat tggttcagtg attgatggca agctagaaat gattcataat gcgcgtacac
     2161 aaaacgctag tattaaatac gtactcaaag atttaaaacc gtttgtcggt gatgcatcca
     2221 ttaaatcgat tggtatttca catgcaaaag caaaagattt catggataaa tttaaagaaa
     2281 aattagatga aacttttaca gttcaaaact ttgatttcgg acatacaaca cctgtcattt
     2341 caacacatac cggtgcgggt gcgattggtt tagttgtcct taaagattca tctgattcat
     2401 aatgatggag gtgtcaagca tggctttagc aactttagca ggaggatgtt tttggtgtct
     2461 cgttaaacct tttgatacat ttgacggtgt tgaacgtgtc acatcaggtt atagcggtgg
     2521 gacagtagaa aatccaacct atgaacaggt ttgtacaaat acaacaggcc atgtagaggc
     2581 tgtacaaatt gaatacgatg acaatgtgat cagttatgat gatattttag atatatattt
     2641 caaaacgttt gatccgacag ataaaaacgg tcaatttttt gata
//
LOCUS       DANHPA010000298         1715 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.guided.208, whole genome shotgun sequence.
ACCESSION   DANHPA010000298 DANHPA010000000
VERSION     DANHPA010000298.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1715)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.guided.208"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            183..605
                     /gene="fosB"
                     /locus_tag="PTC28_002597"
     CDS             183..605
                     /gene="fosB"
                     /locus_tag="PTC28_002597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FosB/FosD family fosfomycin resistance
                     bacillithiol transferase"
                     /protein_id="HDK5717798.1"
                     /translation="MIKAINHITYSVSDLRNSIKFYKDILKATLLVEGKHTAYFTLGG
                     VWLALNEEKNISRNEIKQSYTHIAFSISESDFDSWYYWLKCNQVNILKGRERNIKDKQ
                     SIYFTDHDGHKIELHTGTLQERLDYYQQEKTHMKFFKH"
     gene            673..1002
                     /locus_tag="PTC28_002598"
     CDS             673..1002
                     /locus_tag="PTC28_002598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019166890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDK5717799.1"
                     /translation="MIEYEWKHLKPENRESGQFIEVLHPDFKEFGMSGKVYDRSDFEC
                     IELHVAEYEISDFQVEHLAEDCRLCTYTLIDHTRHIKTNRTSIWKMHEGDWKLLFHQG
                     TVKQDPY"
     gene            complement(1107..>1715)
                     /locus_tag="PTC28_002599"
     CDS             complement(1107..>1715)
                     /locus_tag="PTC28_002599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014614467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1829 domain-containing protein"
                     /protein_id="HDK5717800.1"
                     /translation="SDDSLTMNELELAGIDIHTKARSILIQNVLNQFNLVLDGEEIVT
                     NVKNNSFAQSKHNLIQGILKIYDLTLTTKSNVSRLFYEEVFDFLYNEEILGSAKVSVS
                     GESGIKYFIDFILPETKSKPEKLINFANHLDFNKVTTDAFMYRDVKHNRPSRSGLAPQ
                     MLIVANDVEHPITAKARQAAEHEHLSILHWSDKDRIKAILTQ"
BASE COUNT          588 a          230 c          309 g          588 t
ORIGIN      
        1 aaaatcattt ttaaattcga tatatttcat ggtacacttt tttatcacat gtttttagtg
       61 gcatatgcga taaatcacat gtattaaaca gtgggctttc taactattat tttattaaca
      121 caaaatatag tttaaaatat cgttgagata aaagaagtcg tgatgtatta aatgaggatt
      181 tcatgattaa agctatcaat catatcacat attctgtttc ggatttaagg aattctatta
      241 agttctataa agatatctta aaagcgacat tattagttga agggaagcat acagcttatt
      301 ttacactagg aggtgtttgg ttagcactaa acgaggaaaa gaacatatct agaaatgaga
      361 taaaacaatc atacacacat attgcatttt ctataagtga aagtgacttt gacagttggt
      421 actattggct aaagtgtaat caagtgaata tattaaaggg gagagaaaga aatataaaag
      481 acaagcaatc gatttatttt acagatcatg atggtcataa aatagagtta cataccggta
      541 ctttacaaga gcgtttagac tattatcaac aagaaaaaac acatatgaaa ttttttaagc
      601 attaaacacg aatcactttt attaaggaag tgatggtgct gttaatacac aattacttga
      661 aggaggcatt aaataattga atacgaatgg aaacatttga agcctgaaaa tcgggaaagt
      721 gggcaattta ttgaggtttt gcatccagat tttaaagagt ttggtatgtc gggaaaagtg
      781 tatgatagga gtgactttga atgtattgaa ttacatgtag ctgagtatga aataagtgat
      841 tttcaagttg aacatttagc agaagattgt agattatgta catatacttt gatagatcat
      901 acgcggcaca ttaagacaaa tagaacatca atctggaaaa tgcatgaggg tgattggaag
      961 ttattgtttc atcaaggaac agtgaaacaa gatccatatt aacatggaaa agcacctaag
     1021 actttgagaa agtctaggtg cagttttatt cttagctgga aatattgaat tggagttatt
     1081 tcaactttga atcttctgtt attactttac tgtgtcaaaa tggcttttat cctatcttta
     1141 tctgaccaat gtaatattga aagatgttca tgctctgctg cttgacgggc tttagctgta
     1201 attggatgct caacgtcatt tgcgacgatg agcatttgag gggctaatcc gcttctacta
     1261 ggtctattat gtttaacatc tctgtacata aaagcatcag tcgtcacttt attaaaatct
     1321 agatggtttg caaaattgat aagtttttca ggttttgatt ttgtttccgg taaaatgaaa
     1381 tcaataaaat atttgattcc tgattctcct gaaactgaaa cctttgccga acctagaatt
     1441 tcttcgttgt ataaaaaatc gaatacttct tcataaaaga gtcgtgacac atttgacttt
     1501 gtcgttaatg ttaaatcata tatttttaaa atcccttgta tcaagttatg ttttgactga
     1561 gcgaaactat tatttttgac attagtgaca atttcttctc catctaaaac gaggttaaat
     1621 tggtttaaca cattttgaat gagtatactt ctggcttttg tatgaatatc aatacctgcg
     1681 agctcaagtt cattcattgt taaactatcg tcaga
//
LOCUS       DANHPA010000299          949 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.guided.262, whole genome shotgun sequence.
ACCESSION   DANHPA010000299 DANHPA010000000
VERSION     DANHPA010000299.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 949)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 949)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.guided.262"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            <1..652
                     /gene="erm"
                     /locus_tag="PTC28_002600"
     CDS             <1..652
                     /gene="erm"
                     /locus_tag="PTC28_002600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011018369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="23S ribosomal RNA methyltransferase Erm"
                     /protein_id="HDK5717801.1"
                     /translation="TDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKL
                     NTRVTLIHQDILQFQFPNKQRYKIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFY
                     KRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDKYWKL
                     YTYFVSKWVNREYRQLFTKNQFHQAMKHAKVNNLSTVTYEQVLSIFNSYLLFNGRK"
     gene            798..>949
                     /locus_tag="PTC28_002601"
     CDS             798..>949
                     /locus_tag="PTC28_002601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002326770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="topoisomerase DNA-binding C4 zinc finger
                     domain-containing protein"
                     /protein_id="HDK5717802.1"
                     /translation="MPTKRSGPLVGKCPKCGNNIVLKKSFYGCSNYPECKFTLAEHFR
                     KKKLTKT"
BASE COUNT          335 a          169 c          165 g          280 t
ORIGIN      
        1 aaccgatacc gtttacgaaa ttggaacagg taaagggcat ttaacgacga aactggctaa
       61 aataagtaaa caggtaacgt ctattgaatt agacagtcat ctattcaact tatcgtcaga
      121 aaaattaaaa ctgaatactc gtgtcacttt aattcaccaa gatattctac agtttcaatt
      181 ccctaacaaa cagaggtata aaattgttgg gaatattcct taccatttaa gcacacaaat
      241 tattaaaaaa gtggtttttg aaagccgtgc gtctgacatc tatctgattg ttgaagaagg
      301 attctacaag cgtaccttgg atattcaccg aacactaggg ttgctcttgc acactcaagt
      361 ctcgattcag caattgctta agctgccagc ggaatgcttt catcctaaac caaaagtaaa
      421 cagtgtctta ataaaactta cccgccatac cacagatgtt ccagataaat attggaagct
      481 atatacgtac tttgtttcaa aatgggtcaa tcgagaatat cgtcaactgt ttactaaaaa
      541 tcagtttcat caagcaatga aacacgccaa agtaaacaat ttaagtaccg ttacttatga
      601 gcaagtattg tctattttta atagttatct attatttaac gggaggaaat aattctatga
      661 gtcgcttttt taaatttgga aagttacacg ttactaaagg gaatggagat aaattattag
      721 atatactact gacagcttcc aagaagctaa agaggtccct agcgcctacg gggaatttgt
      781 atcgataagg ggtacaaatt cccactaagc gctcgggacc ccttgtagga aaatgtccta
      841 agtgtggcaa caatattgta ttaaaaaaat cgttttatgg ttgttcaaat tatcctgaat
      901 gtaagtttac tttagctgaa cattttagaa agaaaaaact aaccaaaac
//
LOCUS       DANHPA010000300          913 bp    DNA     linear   BCT 09-FEB-2023
DEFINITION  TPA_asm: Staphylococcus pseudintermedius isolate BI-1985
            SAMN29010962-rid17016183.guided.264, whole genome shotgun sequence.
ACCESSION   DANHPA010000300 DANHPA010000000
VERSION     DANHPA010000300.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN29010962
            Sequence Read Archive: SRR19635832
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus; Staphylococcus intermedius group.
REFERENCE   1  (bases 1 to 913)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 913)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 08-FEB-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001610956.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001610956.1
            Genome Coverage       :: 98x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 02/09/2023 06:52:06
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,602
            CDSs (total)                      :: 2,540
            Genes (coding)                    :: 2,476
            CDSs (with protein)               :: 2,476
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Staphylococcus pseudintermedius"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN29010962-rid17016183.guided.264"
                     /isolate="BI-1985"
                     /host="dog"
                     /db_xref="taxon:283734"
                     /country="Argentina"
                     /collection_date="2016"
     gene            20..>913
                     /locus_tag="PTC28_002602"
     CDS             20..>913
                     /locus_tag="PTC28_002602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001802837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HDK5717803.1"
                     /translation="MLTICVIFLVRMLYIKYTQNIMSHKIWLLVLVSTLIPLIPFYKI
                     SNFTFSKDMMNRNVSDTTSSVSHMLDGQQSSVTKDLAINVNQFETSNITYMILLIWVF
                     GSLLCLFYMIKAFRQIDVIKSSSLESSYLNERLKVCQSKMQFYKKHITISYSSNIDNP
                     MVFGLVKSQIVLPTVVVETMNDKEIEYIILHELSHVKSHDLIFNQLYVVFKMIFWFNP
                     ALYISKTMMDNDCEKVCDRNVLKILNRHEHIRYGESILKCSILKSQHINNVAAQYLLG
                     FNSNIKERVKYIALYDSMPKPN"
BASE COUNT          324 a          125 c          140 g          324 t
ORIGIN      
        1 gttaagtata atcagttcat tgctcacgat atgtgtaatt tttttagtga gaatgctcta
       61 tataaaatat actcaaaata ttatgtcaca taagatttgg ttattagtgc tcgtctccac
      121 gttaattcca ttaataccat tttacaaaat atcgaatttt acattttcaa aagatatgat
      181 gaatcgaaat gtatctgaca cgacttcttc ggttagtcat atgttagatg gtcaacaatc
      241 atctgttacg aaagacttag caattaatgt taatcagttt gagacctcaa atataacgta
      301 tatgattctt ttgatatggg tatttggtag tttgttgtgc ttattttata tgattaaggc
      361 attccgacaa attgatgtta ttaaaagttc gtcattggaa tcgtcatatc ttaatgaacg
      421 acttaaagta tgtcaaagta agatgcagtt ctacaaaaag catataacaa ttagttatag
      481 ttcaaacatt gataatccga tggtatttgg tttagtgaaa tcccaaattg tactaccaac
      541 tgtcgtagtc gaaaccatga atgacaaaga aattgaatat attattctac atgaactatc
      601 acatgtgaaa agtcatgact taatattcaa ccagctttat gttgttttta aaatgatatt
      661 ctggtttaat cctgcactat atataagtaa aacaatgatg gacaatgact gtgaaaaagt
      721 atgtgataga aacgttttaa aaattttgaa tcgccatgaa catatacgtt atggtgaatc
      781 gatattaaaa tgctctattt taaaatctca gcacataaat aatgtggcag cacaatattt
      841 actaggtttt aattcaaata ttaaagaacg tgttaagtat attgcacttt atgattcaat
      901 gcctaaacct aat
//
